Genome: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/data/genome_files/GCF_026571515.1_ASM2657151v2_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: NW_026857974.1:96325-96424 plus
PDF file name: /home/shared/8TB_HDD_01/sam/gitrepos/RobertsLab/project-clam-oa/output/02.00-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_13225.ps.pdf
Locus Name: Cluster_13225
GUUAAGACAAUAGGAUAGGUGCAAAUCAAAGUGACUGUGAAUUGUUGUUGAUUCUCAAAUCACAGUCUGCUUUGGUGAGCAUCUGCCUGUAACUAUUCUU
.........(((((.(((((((..((((((((((((((((.(((...........))).)))))))).))))))))..)))))))))))).......... (-38.20)
..UAAGACAAUAGGAUAGGUGu.............................................................................. len:20 al:1
..UAAGACAAUgGGAUAGGUGC.............................................................................. len:20 al:2
..UAAGACAAUAGGAUAGGUGC.............................................................................. len:20 al:11
...AAGACAAUAGGAUAGGUGu.............................................................................. len:19 al:1
...AAGACAAUAGGAUAGGUGC.............................................................................. len:19 al:5
.....................uAAAUCAAAGUGACUGUGAAU.......................................................... len:21 al:1
.....................CAAAUCAAAGUGACUGUGAAUUGU....................................................... len:24 al:1
.....................CAAAUCAAAGUGACUGUGAAUUG........................................................ len:23 al:3
.....................uAAAUCAAAGUGACUGUGAAUUG........................................................ len:23 al:66
.....................uAAAUCAAAGUGACUGUGAAUU......................................................... len:22 al:17
......................AAAUCAAcGUGACUGUGAAUU......................................................... len:21 al:1
......................AAAUCAAAGUaACUGUGAAUUG........................................................ len:22 al:5
......................AAgUCAAAGUGACUGUGAAUUG........................................................ len:22 al:20
......................AAAUCAAAGUGACUGUGAAUUGc....................................................... len:23 al:339
......................AAAUCAAAGUGACUGUGAAUUGUc...................................................... len:24 al:6
......................AAAUCAgAGUGACUGUGAAUUG........................................................ len:22 al:20
......................AAAUCAAgGUGACUGUGAAUU......................................................... len:21 al:5
......................AAAUCAAAGUGACUGUGAAUUGUU...................................................... len:24 al:88
......................AAAUCAAAGUGACUGcGAAUUG........................................................ len:22 al:19
......................gAAUCAAAGUGACUGUGAAUUG........................................................ len:22 al:18
......................AAAUCAAAGUGACUGUGAAaU......................................................... len:21 al:1
......................AAAUCAAAGUGACUGUGAAUcGU....................................................... len:23 al:1
......................AAAUCgAAGUGACUGUGAAUUGU....................................................... len:23 al:9
......................cAAUCAAAGUGACUGUGAAUUGU....................................................... len:23 al:6
......................AAAUCAAAGUGAuUGUGAAUU......................................................... len:21 al:3
......................AgAUCAAAGUGACUGUGAAUUGU....................................................... len:23 al:14
......................AAAgCAAAGUGACUGUGAAUU......................................................... len:21 al:1
......................AgAUCAAAGUGACUGUGAAUU......................................................... len:21 al:6
......................cAAUCAAAGUGACUGUGAAUU......................................................... len:21 al:2
......................AAAUCAAAGUGACUGUGAgUU......................................................... len:21 al:2
......................AAAcCAAAGUGACUGUGAAUUGU....................................................... len:23 al:7
......................AAAUCAAAGUGACUGUGAAUUaU....................................................... len:23 al:1
......................AAcUCAAAGUGACUGUGAAUUGU....................................................... len:23 al:2
......................AAAUCAAAGUGACUGUGAgUUG........................................................ len:22 al:22
......................AAAUCAAAGUGACUGUGAAUg......................................................... len:21 al:8
......................AAAUCAAAGUGACUGUGAAaUG........................................................ len:22 al:1
......................AAAUCAAAGUGACUGUGAAUUGg....................................................... len:23 al:27
......................AAAUCAAAGUGAuUGUGAAUUG........................................................ len:22 al:3
......................AuAUCAAAGUGACUGUGAAUUG........................................................ len:22 al:5
......................AAAUCAAAGUaACUGUGAAUUGU....................................................... len:23 al:3
......................AAgUCAAAGUGACUGUGAAUUGU....................................................... len:23 al:4
......................AAAUCAAAGUGACUGUGAAcUG........................................................ len:22 al:3
......................AAAUCAAAuUGACUGUGAAUU......................................................... len:21 al:1
......................AAAUCAAAGUGgCUGUGAAUUGU....................................................... len:23 al:16
......................AAAUCAAAGUGACUGUGAAaUGU....................................................... len:23 al:1
......................AAAUCAAAGUGACUGUGAgUUGU....................................................... len:23 al:9
......................AAAUCAAAGUGACUGUGAAUUGU....................................................... len:23 al:2609
......................AAAUCAAAGUGACUGcGAAUUGU....................................................... len:23 al:6
......................AAAUCAAAGUGACUGUGcAUUG........................................................ len:22 al:1
......................uAAUCAAAGUGACUGUGAAUUGU....................................................... len:23 al:5
......................uAAUCAAAGUGACUGUGAAUUG........................................................ len:22 al:11
......................AcAUCAAAGUGACUGUGAAUU......................................................... len:21 al:2
......................AAAUCAAAGUGAaUGUGAAUUG........................................................ len:22 al:4
......................AAAUCcAAGUGACUGUGAAUU......................................................... len:21 al:2
......................AAAUCAAuGUGACUGUGAAUUGU....................................................... len:23 al:1
......................AAAUgAAAGUGACUGUGAAUUG........................................................ len:22 al:1
......................AAAUCAAAGUGgCUGUGAAUUG........................................................ len:22 al:34
......................AAAUCAAAGUGACgGUGAAUUG........................................................ len:22 al:6
......................AAAUCAAAGUGACUGUGAAUUc........................................................ len:22 al:4
......................AAAUCAAAGUGACUGUGAgU.......................................................... len:20 al:1
......................AAAUCAAAGUGACgGUGAAUUGU....................................................... len:23 al:1
......................AgAUCAAAGUGACUGUGAAUUG........................................................ len:22 al:43
......................AAAUCAAAGUGACUGcGAAUU......................................................... len:21 al:3
......................AAAUCAAAGUGACUGUGAAUUa........................................................ len:22 al:502
......................AAAUCAAAGUGACUGUGAAgU......................................................... len:21 al:3
......................AAAUCAAAaUGACUGUGAAUUGU....................................................... len:23 al:6
......................AAAUCAAAGUGACUGUGAuUUGU....................................................... len:23 al:3
......................AAAUCAAAGaGACUGUGAAUUG........................................................ len:22 al:2
......................AAAUCAAAGUGACUGUGAAUU......................................................... len:21 al:1874
......................AAAUCAAAGUGACUGUGgAUUGUU...................................................... len:24 al:1
......................AAAUCAAAGUGACUGUGAAUUGaU...................................................... len:24 al:2
......................AAAUCAAAGUGACUGUGAAUUu........................................................ len:22 al:22
......................AAAUgAAAGUGACUGUGAAUUGU....................................................... len:23 al:2
......................AAAUCAAAGUGACcGUGAAUU......................................................... len:21 al:9
......................AAAUCAAuGUGACUGUGAAUUG........................................................ len:22 al:1
......................AAAUCAAAGUGACUGUGAAUUGUUa..................................................... len:25 al:3
......................AAAUCAAAGUGACUGUGAAgUG........................................................ len:22 al:1
......................AAAUCAAAGUGACUGUGAAUa......................................................... len:21 al:9
......................AAAUCAAAGUGACUGUGAAUUuUU...................................................... len:24 al:1
......................AAAUCAAAGUGACUGUuAAUUGU....................................................... len:23 al:1
......................AAAUCAAAGUGACcGUGAAUUG........................................................ len:22 al:31
......................AAAUCAAAGUGACUGUGgAUUG........................................................ len:22 al:30
......................AAAUCAAAGUGACUGUGAAUaGU....................................................... len:23 al:1
......................AAAUCgAAGUGACUGUGAAUU......................................................... len:21 al:5
......................AAAUCAAAGcGACUGUGAAUUGU....................................................... len:23 al:3
......................gAAUCAAAGUGACUGUGAAUUGU....................................................... len:23 al:10
......................AAAUCAAAGUGACUGUGAAUcG........................................................ len:22 al:28
......................gAAUCAAAGUGACUGUGAAUU......................................................... len:21 al:2
......................AAAUCAAAGUGACgGUGAAUU......................................................... len:21 al:3
......................AAAUCAcAGUGACUGUGAAUUG........................................................ len:22 al:2
......................AAAUCAAcGUGACUGUGAAUUG........................................................ len:22 al:4
......................AAAUCAAgGUGACUGUGAAUUGU....................................................... len:23 al:9
......................AAAUCAAgGUGACUGUGAAUUG........................................................ len:22 al:30
......................AAAcCAAAGUGACUGUGAAUU......................................................... len:21 al:3
......................AAAUCAgAGUGACUGUGAAUU......................................................... len:21 al:8
......................AAAUCAAAGUGACUGUaAAUUG........................................................ len:22 al:5
......................AAAUCAAAGUGACUaUGAAUUGU....................................................... len:23 al:1
......................AAAUCAAAGUGACUGUGgAU.......................................................... len:20 al:1
......................gAAUCAAAGUGACUGUGAAUUGUU...................................................... len:24 al:2
......................AAAUCAAAGUGACUGUGAAUUuU....................................................... len:23 al:2
......................AAuUCAAAGUGACUGUGAAUUG........................................................ len:22 al:3
......................AAAUCAAAGUGACUGUGuAUUG........................................................ len:22 al:7
......................AAAUCAAAGUGACUGUGgAUU......................................................... len:21 al:7
......................AAAUCAAAGUGACUGgGAAUUG........................................................ len:22 al:1
......................AAAUCAAAGUGACUGUGAAUgG........................................................ len:22 al:2
......................AAAUCAAAGUGACUaUGAAUUG........................................................ len:22 al:4
......................AAAUCAAAGUGgCUGUGAAU.......................................................... len:20 al:2
......................AAAUCAAAaUGACUGUGAAUUG........................................................ len:22 al:2
......................AAuUCAAAGUGACUGUGAAUUGU....................................................... len:23 al:1
......................AAAUCAAAGgGACUGUGAAUUG........................................................ len:22 al:3
......................AAAUCAAAGUGACUGUGgAUUGU....................................................... len:23 al:14
......................AAAUCAAAGUaACUGUGAAUU......................................................... len:21 al:2
......................AAAUCAAAGUGACUaUGAAUU......................................................... len:21 al:1
......................AAAgCAAAGUGACUGUGAAUUGU....................................................... len:23 al:1
......................AAAUCAAAGUGACUGUGA............................................................ len:18 al:6
......................AAAUCAAAGUGACUGUGAAUgGU....................................................... len:23 al:2
......................AAAUCAAAGUGACcGUGAAUUGU....................................................... len:23 al:10
......................AAAUuAAAGUGACUGUGAAUUGU....................................................... len:23 al:1
......................AAAcCAAAGUGACUGUGAAUUG........................................................ len:22 al:21
......................AAAUCAAAGUGACUGUGAAU.......................................................... len:20 al:178
......................AAAUCAAAGUGACUGUGAAcUGU....................................................... len:23 al:1
......................AAAUCAAAGUGAgUGUGAAUUG........................................................ len:22 al:2
......................gAAUCAAAGUGACUGUGAAU.......................................................... len:20 al:1
......................AAAUCAAAGUGAaUGUGAAUU......................................................... len:21 al:3
......................AAAUCAgAGUGACUGUGAAUUGU....................................................... len:23 al:6
......................AAAUCcAAGUGACUGUGAAUUG........................................................ len:22 al:2
......................AAAUCAAAGcGACUGUGAAUUG........................................................ len:22 al:17
......................AAAUCAAAGUGACUGUGAAc.......................................................... len:20 al:17
......................AAcUCAAAGUGACUGUGAAUU......................................................... len:21 al:1
......................AAAcCAAAGUGACUGUGAAUUGUU...................................................... len:24 al:1
......................AAAUCAAAGcGACUGUGAAUU......................................................... len:21 al:3
......................AAAUCAAAGaGACUGUGAAUU......................................................... len:21 al:1
......................AAAUCAcAGUGACUGUGAAUU......................................................... len:21 al:1
......................AAAUCAAAGUGACaGUGAAUU......................................................... len:21 al:1
......................AAAUCAAAGUGgCUGUGAAUUGUU...................................................... len:24 al:2
......................AAAUCAAAGUGACUGUaAAUUGU....................................................... len:23 al:3
......................AAAUCAAAGUGACUGU.............................................................. len:16 al:1
......................AAAUCAAAGUGACaGUGAAUUG........................................................ len:22 al:11
......................AAAUCAAAGUGACUGUGAAUc......................................................... len:21 al:135
......................AAAUCAAAGUGACUGUGAAUUGUUu..................................................... len:25 al:9
......................AAAUCuAAGUGACUGUGAAUUG........................................................ len:22 al:1
......................AAAUCAAAGUGACUGUGAA........................................................... len:19 al:10
......................AAAUCAAAGUGuCUGUGAAUUGU....................................................... len:23 al:3
......................AAAUCgAAGUGACUGUGAAUUG........................................................ len:22 al:21
......................cAAUCAAAGUGACUGUGAAUUG........................................................ len:22 al:12
......................AcAUCAAAGUGACUGUGAAUUG........................................................ len:22 al:1
......................uAAUCAAAGUGACUGUGAAUU......................................................... len:21 al:1
......................AAAUCAAAGUGACUGUGAAUUG........................................................ len:22 al:7284
......................AAAUCAAAGUGgCUGUGAAUU......................................................... len:21 al:10
......................AAAUCAAAGUGACUGUGAAUUGa....................................................... len:23 al:514
......................AAAUCAAAGUGuCUGUGAAUUG........................................................ len:22 al:4
......................AAcUCAAAGUGACUGUGAAUUG........................................................ len:22 al:4
......................AAAUCAAAGUGACUGUGAAUUGcU...................................................... len:24 al:2
......................AAgUCAAAGUGACUGUGAAUU......................................................... len:21 al:3
......................AAAUCAAAuUGACUGUGAAUUG........................................................ len:22 al:1
......................AAAUCAAAGUGACUGUGAAUUGUa...................................................... len:24 al:41
......................AAAUCAAAGUGACUGaGAAUUG........................................................ len:22 al:1
......................AAAUCAAAGUGAaUGUGAAUUGU....................................................... len:23 al:2
......................AAAUCAuAGUGACUGUGAAUUG........................................................ len:22 al:4
......................AAgUCAAAGUGACUGUGAAUUGUU...................................................... len:24 al:1
......................AAAUCAAAGUGACUGUGAgUUGUU...................................................... len:24 al:2
.......................AAUCAAAGUGACUGUGgAUUG........................................................ len:21 al:1
.......................AAUCAAAGUGACUGUGAAUUGUUG..................................................... len:24 al:1
.......................AAcCAAAGUGACUGUGAAUUGU....................................................... len:22 al:2
.......................AAUCAAAGUGACUGUGAAUUa........................................................ len:21 al:1
.......................AAUCAAAGUGACUGUGAgUUG........................................................ len:21 al:1
.......................AAUCAAAGUGACUGUGAAUUG........................................................ len:21 al:30
.......................AAUCAAAGUGACUGUGAAUUGU....................................................... len:22 al:14
.......................AAUCAAAGUGACUGUGAAUUGUc...................................................... len:23 al:1
.......................AAUCAAAGUGACUGUGAAUU......................................................... len:20 al:8
.......................AAUCAAAGUGACUGUGAAUUGUU...................................................... len:23 al:1
.......................AAUCAAAGUGACUGUGAAUUGa....................................................... len:22 al:2
.......................AAUCgAAGUGACUGUGAAUUG........................................................ len:21 al:2
........................AUCAAAGUGACUGUGAAUUGU....................................................... len:21 al:4
........................AUCAAAGUGACUGUGAAUUG........................................................ len:20 al:1
........................AUCAAAGUGACUGUGAAUU......................................................... len:19 al:1
.........................UCAAAGUGACUGUGAAUUG........................................................ len:19 al:3
..........................CAAAGUGACUGUGAAUUG........................................................ len:18 al:8
..........................CAAAGUGACUGUGAAUUGc....................................................... len:19 al:1
..........................CAAAGUGACUGUGAAUUc........................................................ len:18 al:1
...........................AAAGUGACUGUGAAUUG........................................................ len:17 al:1
...........................AAAGUGACUGUGAAUUGU....................................................... len:18 al:1
.......................................................CgAAUCACAGUCUGCUUUGGUGAGC.................... len:25 al:2
.......................................................aAAAUCACAGUCUGCUUUGGUGAGC.................... len:25 al:2
........................................................AAAUCACAGUCUGCUUUGGUGAGu.................... len:24 al:1
........................................................AAAUCACAGUCUGCUUUGGUGAGC.................... len:24 al:9
........................................................AAAgCACAGUCUGCUUUGGUGAGC.................... len:24 al:1
........................................................cAAUCACAGUCUGCUUUGGUGAGC.................... len:24 al:2
.........................................................AAUCACAGUCUGCUUUGGUGAuC.................... len:23 al:17
.........................................................AAUCACAGUCUGCUUUGG......................... len:18 al:11
.........................................................AAUCACAGaCUGCUUUGGUGAGC.................... len:23 al:25
.........................................................AAUCACAGUgUGCUUUGGUGAGC.................... len:23 al:16
.........................................................AAUCACAGUCcGCUUUGGUGAGCA................... len:24 al:1
.........................................................AAUCACAGUCUGCUUUGGUGAG..................... len:22 al:9
.........................................................AAUCACcGUCUGCUUUGGUGAGC.................... len:23 al:34
.........................................................AAUCACAGUCUGCUUcGGUGAGCA................... len:24 al:1
.........................................................AAUCACAGUCUGCUUUuGUGAGC.................... len:23 al:5
.........................................................AAUCACAGUCUGCcUUGGUGAGC.................... len:23 al:212
.........................................................AAUCACAGUCUGCUUUGGUGcGC.................... len:23 al:18
.........................................................AAUCACAGUCUGCUUUGGUGAaCA................... len:24 al:1
.........................................................AAUCACAGUCUGCUaUGGUGAGC.................... len:23 al:11
.........................................................AAUCACAGUuUGCUUUGGUGAGC.................... len:23 al:30
.........................................................AAUCACAGUCUGCUUUGGUuAGC.................... len:23 al:7
.........................................................AAUCACAGcCUGCUUUGGUGAGC.................... len:23 al:251
.........................................................AAUCACAGUCUGCUUUGGUGgGCA................... len:24 al:1
.........................................................AAUCACAGUCUGCUUUGGUG....................... len:20 al:193
.........................................................uAUCACAGUCUGCUUUGGUG....................... len:20 al:1
.........................................................AAUaACAGUCUGCUUUGGUGAGC.................... len:23 al:5
.........................................................AAUCACAGUCUGCUUUGGUGAGg.................... len:23 al:81
.........................................................AAUCACAGUCUGCgUUGGUGAGC.................... len:23 al:59
.........................................................AAUCACAGUCUGCUUUGGUGAGu.................... len:23 al:14468
.........................................................AAUCACAGUCUGgUUUGGUGAGC.................... len:23 al:4
.........................................................AAUCACAGUCUaCUUUGGUGAGC.................... len:23 al:43
.........................................................AAUCACAGUCUGCUUUGGUGAGCg................... len:24 al:14
.........................................................AAUCACAGUCUGCUUUGa......................... len:18 al:6
.........................................................AgUCACAGUCUGCUUUGGUGAGC.................... len:23 al:198
.........................................................cAUCACAGUCUGCUUUGGUGAGC.................... len:23 al:135
.........................................................AAUCACAGUCUGCUUUGGUGAGuA................... len:24 al:4
.........................................................AAUCACAGUCUGCUUUGGUa....................... len:20 al:27
.........................................................AAUCACAGUCUGCUgUGGUGAGC.................... len:23 al:42
.........................................................AAUCACAGUCUGCUUUGGUGAGCAg.................. len:25 al:1
.........................................................AAUCACAGUCUGCUgUGGUGAGCA................... len:24 al:1
.........................................................AAUCACAGUCUGCUUUGGUGAGCuU.................. len:25 al:8
.........................................................AAUCgCAGUCUGCUUUGGUG....................... len:20 al:1
.........................................................AAUCACAGUCUGCUUaGGUGAGCA................... len:24 al:1
.........................................................AAUCACAGUCUGCUUUGaUGAGC.................... len:23 al:43
.........................................................AAUCACAGUCUGuUUUGGUGAGC.................... len:23 al:63
.........................................................AAUCAgAGUCUGCUUUGGUGAGC.................... len:23 al:1
.........................................................AAUCACgGUCUGCUUUGGUGAGCA................... len:24 al:1
.........................................................AAUCACAaUCUGCUUUGGUGAGC.................... len:23 al:31
.........................................................AAUCAaAGUCUGCUUUGGUGAGC.................... len:23 al:2
.........................................................AAUCACAGUCUGCgUUGGUGAGCA................... len:24 al:1
.........................................................AAUCACAGUCUGaUUUGGUGAGC.................... len:23 al:3
.........................................................AAcCACAGUCUGCUUUGGUGAGCA................... len:24 al:2
.........................................................AAUCACAGUgUGCUUUGGUG....................... len:20 al:1
.........................................................AAUCACAGUCaGCUUUGGUGAGC.................... len:23 al:15
.........................................................AAUCACAGUCUGCUUaGGUGAGC.................... len:23 al:26
.........................................................AAUCACAGUCUGCUcUGGUG....................... len:20 al:1
.........................................................AAUCACAGcCUGCUUUGGUGAGCA................... len:24 al:4
.........................................................AAUCACAGUCUGCUUUGcUGAGC.................... len:23 al:3
.........................................................AAUCAuAGUCUGCUUUGGUGAGC.................... len:23 al:84
.........................................................AAUCuCAGUCUGCUUUGGUGAGC.................... len:23 al:20
.........................................................AAUCACAGUCUGCUUUGGUGuGC.................... len:23 al:37
.........................................................gAUCACAGUCUGCUUUGGUGAGC.................... len:23 al:908
.........................................................AAUCACAGUCUGCUUUGGUcAGC.................... len:23 al:3
.........................................................AAUCACAGUCUGCUUUGGUGAGCAa.................. len:25 al:28
.........................................................AAUCACAGUCUGCUUUGGa........................ len:19 al:4
.........................................................AAUCACAGUCUGCUUUGGUGgGC.................... len:23 al:426
.........................................................AAUCACAGUCUGCUUgGGUGAGC.................... len:23 al:7
.........................................................AAUCACAGUCUGCUUUGGgGAGC.................... len:23 al:33
.........................................................AAUCACAGUCUaCUUUGGUGAGCA................... len:24 al:1
.........................................................AAUCACAGUCUGCUUUGGc........................ len:19 al:1
.........................................................AAUCACAGUCUGCUUUGGaGAGC.................... len:23 al:15
.........................................................AAUCACAGUCUGCUcUGGUGAGC.................... len:23 al:127
.........................................................AAUCACAGUCUGCUUUGuUGAGC.................... len:23 al:6
.........................................................AAUCAuAGUCUGCUUUGGUGAGCA................... len:24 al:2
.........................................................AAUCACAGUCUGCUcUGGUGAGCA................... len:24 al:2
.........................................................AAUCACAGUCUGCUUUGGUGAuCA................... len:24 al:1
.........................................................AuUCACAGUCUGCUUUGGUGAGC.................... len:23 al:18
.........................................................AAUCACAGUCgGCUUUGGUGAGC.................... len:23 al:6
.........................................................AAUCACAGUCUcCUUUGGUGAGC.................... len:23 al:4
.........................................................AAUCACAGUCUGCUUU........................... len:16 al:1
.........................................................AAUCACAGUCUuCUUUGGUGAGC.................... len:23 al:7
.........................................................AcUCACAGUCUGCUUUGGUG....................... len:20 al:1
.........................................................AAUCACAGUCUGCUUUGGUGA...................... len:21 al:13
.........................................................AAUCACAGUCUGCUUUGGUu....................... len:20 al:4
.........................................................AAUCACAuUCUGCUUUGGUGAGC.................... len:23 al:2
.........................................................AAUCACAGUCUGCUUUGGgGA...................... len:21 al:1
.........................................................AAUCACAGUCcGCUUUGGUG....................... len:20 al:3
.........................................................gAUCACAGUCUGCUUUGGUGAGCA................... len:24 al:3
.........................................................AAgCACAGUCUGCUUUGGUGAGC.................... len:23 al:9
.........................................................AAUCACAcUCUGCUUUGGUGAGC.................... len:23 al:1
.........................................................AAUCACAGUCUGCcUUGGUGAGCA................... len:24 al:2
.........................................................AAUCgCAGUCUGCUUUGGUGAGC.................... len:23 al:220
.........................................................AAUCACAGUCUGCUUUaGUGAGC.................... len:23 al:35
.........................................................AAUCACAGcCUGCUUUGGUG....................... len:20 al:1
.........................................................AAUCACAGUCUGCUUUGGUGuGCA................... len:24 al:1
.........................................................AAcCACAGUCUGCUUUGGUGAGC.................... len:23 al:205
.........................................................cAUCACAGUCUGCUUUGGUGAGCA................... len:24 al:1
.........................................................AAUCACAGUCUGCUUUGGUaAGC.................... len:23 al:31
.........................................................AAUCACAGUCUGCUUUGGUGAGC.................... len:23 al:60686
.........................................................cAUCACAGUCUGCUUUGGUG....................... len:20 al:1
.........................................................AAUCACAGUCUGCUUUGGUGAu..................... len:22 al:1
.........................................................AAUCACAGUCUGuUUUGGUGAGCA................... len:24 al:2
.........................................................AAUuACAGUCUGCUUUGGUGAGC.................... len:23 al:48
.........................................................uAUCACAGUCUGCUUUGGUGAGC.................... len:23 al:44
.........................................................AAUCACAGUCUGCUUUGGUGAGCA................... len:24 al:563
.........................................................AAUCcCAGUCUGCUUUGGUGAGC.................... len:23 al:33
.........................................................AAUCACAGUaUGCUUUGGUGAGC.................... len:23 al:7
.........................................................AAUgACAGUCUGCUUUGGUGAGC.................... len:23 al:14
.........................................................AAUCACAGUCUGCUUUGGUGAGCc................... len:24 al:26
.........................................................AcUCACAGUCUGCUUUGGUGAGC.................... len:23 al:21
.........................................................AAUCACAGUCUGCUUUGGUGAaC.................... len:23 al:61
.........................................................AAUCgCAGUCUGCUUUGGUGAGCA................... len:24 al:6
.........................................................AAUCACgGUCUGCUUUGGUGAGC.................... len:23 al:238
.........................................................AAaCACAGUCUGCUUUGGUGAGC.................... len:23 al:19
.........................................................AAUCACAGUCUGCUUUGGUGAcC.................... len:23 al:7
.........................................................AAUCACAGUCUGCUUUGGUGAGCAUu................. len:26 al:1
.........................................................AAUCACAGUCcGCUUUGGUGAGC.................... len:23 al:196
.........................................................AAUCACAGUCUGCUUUGGUGAGa.................... len:23 al:2342
.........................................................AgUCACAGUCUGCUUUGGUGA...................... len:21 al:1
.........................................................AAUCACAGUCUGCaUUGGUGAGC.................... len:23 al:8
.........................................................AAUCACAGUCUGCUUUaGUGAGCA................... len:24 al:1
.........................................................AAUCACuGUCUGCUUUGGUGAGC.................... len:23 al:61
.........................................................AAUCACAGgCUGCUUUGGUGAGC.................... len:23 al:2
.........................................................AAUCACAGUCUGCUUUGGUGAGCgU.................. len:25 al:2
.........................................................AAUCACAGUCUGCUUcGGUGAGC.................... len:23 al:138
.........................................................AAUCACAGUCUGCUUUGGUGAa..................... len:22 al:1
.........................................................AAUCACAGUCUGCUUUGGU........................ len:19 al:14
.........................................................AAUCACAGUCUGCUUUGGUaA...................... len:21 al:3
.........................................................AAUCACAGUCUGCgUUGGUG....................... len:20 al:1
.........................................................AAUCACAGUCUGCUUUGGUGAGCAU.................. len:25 al:6
.........................................................AAUCACAGUCUGCUUUGGcGAGC.................... len:23 al:149
.........................................................AAUCACAGUCUGCUUUGGUGAGCu................... len:24 al:140
.........................................................AAUCACAGUCUGCcUUGGUG....................... len:20 al:3
..........................................................AUCACAGUCUaCUUUGGUGAGC.................... len:22 al:1
..........................................................AUCACAGUCUGCUUUGGUGAGC.................... len:22 al:37
..........................................................AaCACAGUCUGCUUUGGUGAGC.................... len:22 al:2
...........................................................UCACAGUCUGCUUUGGUGAGC.................... len:21 al:2
............................................................CACAGUCUGCUUUGGUGAGC.................... len:20 al:5
............................................................CACAGUCUGCUUUGGcGAGC.................... len:20 al:2
.............................................................ACAGUCUGCUUgGGUGAGC.................... len:19 al:1
.............................................................ACuGUCUGCUUUGGUGAGC.................... len:19 al:1
.............................................................ACAGUCUGCUUUGGUGAGC.................... len:19 al:86
.............................................................ACAGUCUGCUUUGGUGAGa.................... len:19 al:4
.............................................................ACAGUCUGCUUUGGUGgGC.................... len:19 al:2
.............................................................ACAGcCUGCUUUGGUGAGCA................... len:20 al:1
.............................................................ACAGUCUGCUUUuGUGAGC.................... len:19 al:1
.................................................................UCUGCUUUGGUGAGC.................... len:15 al:1
................................................................................AUCUGCCUGUAACUAUUCU. len:19 al:1
................................................................................AUCUGCCUGUAACUAUUC.. len:18 al:4