Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 196_R1_001 196_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22003473.0 3.3 Gbp 0.0 150.0 67.0 23.071911417430872 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 196_R2_001 196_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22003473.0 3.3 Gbp 0.0 150.0 67.0 23.07349056965984 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 199_R1_001 199_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16783759.0 2.5 Gbp 0.0 150.0 65.0 22.192223936229208 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 199_R2_001 199_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16783759.0 2.5 Gbp 0.0 150.0 67.0 22.329347540530662 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 211_R1_001 211_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17846428.0 2.6 Gbp 0.0 150.0 66.0 23.85590637568076 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 211_R2_001 211_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17846428.0 2.6 Gbp 0.0 150.0 67.0 24.010281036983063 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 24_R1_001 24_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19061228.0 2.8 Gbp 0.0 150.0 69.0 21.879220582228573 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 24_R2_001 24_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19061228.0 2.8 Gbp 0.0 150.0 67.0 21.168018799289808 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 260_R1_001 260_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19282887.0 2.8 Gbp 0.0 150.0 66.0 21.059625767795804 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 260_R2_001 260_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19282887.0 2.8 Gbp 0.0 150.0 67.0 20.737860129061673 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 26_R1_001 26_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17972540.0 2.6 Gbp 0.0 150.0 64.0 19.689544017660353 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 26_R2_001 26_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17972540.0 2.6 Gbp 0.0 150.0 67.0 19.458640116010674 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 30_R1_001 30_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19810124.0 2.9 Gbp 0.0 150.0 66.0 21.83892027772551 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 30_R2_001 30_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19810124.0 2.9 Gbp 0.0 150.0 66.0 22.04641945023789 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 310_R1_001 310_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19737649.0 2.9 Gbp 0.0 150.0 68.0 21.589484452539658 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 310_R2_001 310_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19737649.0 2.9 Gbp 0.0 150.0 67.0 20.275931545638468 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 33_R1_001 33_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19918975.0 2.9 Gbp 0.0 150.0 68.0 20.910169519240533 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 33_R2_001 33_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19918975.0 2.9 Gbp 0.0 150.0 67.0 20.74777333100428 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 341_R1_001 341_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19715666.0 2.9 Gbp 0.0 150.0 66.0 20.82296009546582 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 341_R2_001 341_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19715666.0 2.9 Gbp 0.0 150.0 67.0 19.375914793424442 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 34_R1_001 34_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22627992.0 3.3 Gbp 0.0 150.0 67.0 20.190072701190502 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 34_R2_001 34_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22627992.0 3.3 Gbp 0.0 150.0 67.0 20.391548600178634 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 35_R1_001 35_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17663366.0 2.6 Gbp 0.0 150.0 65.0 21.51832663303865 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 35_R2_001 35_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 17663366.0 2.6 Gbp 0.0 150.0 67.0 21.08073020680434 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 363_R1_001 363_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20926097.0 3.1 Gbp 0.0 150.0 66.0 20.152678554796893 150.0 150 pass fail fail pass fail fail pass pass fail fail fail 363_R2_001 363_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 20926097.0 3.1 Gbp 0.0 150.0 67.0 18.94078696556372 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 367_R1_001 367_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19352690.0 2.9 Gbp 0.0 150.0 67.0 23.259112560545443 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 367_R2_001 367_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19352690.0 2.9 Gbp 0.0 150.0 67.0 20.75883248828022 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 376_R1_001 376_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36539657.0 5.4 Gbp 0.0 150.0 67.0 19.020972654609494 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 376_R2_001 376_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 36539657.0 5.4 Gbp 0.0 150.0 67.0 17.139994920525933 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 460_R1_001 460_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18956830.0 2.8 Gbp 0.0 150.0 69.0 24.454214969476006 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 460_R2_001 460_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18956830.0 2.8 Gbp 0.0 150.0 67.0 22.251879418050102 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 485_R1_001 485_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19696678.0 2.9 Gbp 0.0 150.0 66.0 22.710265270255242 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 485_R2_001 485_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 19696678.0 2.9 Gbp 0.0 150.0 67.0 20.783805079596 150.0 150 pass pass fail pass fail fail pass pass fail fail fail 501_R1_001 501_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21244405.0 3.1 Gbp 0.0 150.0 68.0 24.74446920695258 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 501_R2_001 501_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21244405.0 3.1 Gbp 0.0 150.0 67.0 22.738051231447663 150.0 150 pass pass warn pass fail fail pass pass fail fail fail 71_R1_001 71_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21953712.0 3.2 Gbp 0.0 150.0 66.0 28.391548193852405 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 71_R2_001 71_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 21953712.0 3.2 Gbp 0.0 150.0 67.0 27.853273274946332 150.0 150 pass pass fail pass fail warn pass pass fail fail fail 88_R1_001 88_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22568598.0 3.3 Gbp 0.0 150.0 66.0 21.95167794470069 150.0 150 pass fail fail pass fail warn pass pass fail fail fail 88_R2_001 88_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 22568598.0 3.3 Gbp 0.0 150.0 67.0 22.11367109054318 150.0 150 pass pass fail pass fail fail pass pass fail fail fail