CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 170602 760123 18.33 930725 2 185112 778919 19.20 964031 3 171984 767758 18.30 939742 4 166584 730742 18.56 897326 5 172043 741909 18.82 913952 6 173363 758611 18.60 931974 7 173114 758286 18.59 931400 8 173716 752391 18.76 926107 9 175517 765538 18.65 941055 10 176800 765858 18.76 942658 11 179151 755089 19.18 934240 12 177600 769019 18.76 946619 13 176524 760954 18.83 937478 14 177084 756157 18.98 933241 15 175772 764309 18.70 940081 16 175902 769262 18.61 945164 17 175506 756949 18.82 932455 18 174903 759963 18.71 934866 19 175872 754484 18.90 930356 20 177458 762340 18.88 939798 21 175858 798993 18.04 974851 22 173182 751183 18.74 924365 23 176210 765235 18.72 941445 24 174894 766796 18.57 941690 25 172567 740384 18.90 912951 26 175808 747767 19.04 923575 27 173703 752269 18.76 925972 28 172743 736067 19.01 908810 29 176285 747710 19.08 923995 30 171866 739095 18.87 910961 31 169914 728976 18.90 898890 32 170505 725303 19.03 895808 33 171262 735260 18.89 906522 34 169750 725740 18.96 895490 35 169454 736010 18.71 905464 36 166834 725542 18.70 892376 37 162712 717769 18.48 880481 38 162976 701242 18.86 864218 39 161473 709121 18.55 870594 40 160563 703548 18.58 864111 41 160929 700374 18.68 861303 42 160726 711896 18.42 872622 43 156212 691479 18.43 847691 44 156760 687115 18.58 843875 45 155230 693078 18.30 848308 46 151398 669707 18.44 821105 47 150134 657451 18.59 807585 48 149553 658414 18.51 807967 49 148616 655319 18.49 803935 50 147601 649952 18.51 797553 51 145947 650753 18.32 796700 52 147623 637624 18.80 785247 53 142474 636202 18.30 778676 54 142160 636195 18.26 778355 55 139324 621164 18.32 760488 56 138320 602680 18.67 741000 57 135491 602674 18.36 738165 58 134001 588422 18.55 722423 59 133316 584648 18.57 717964 60 130461 580394 18.35 710855 61 127759 569952 18.31 697711 62 126678 565575 18.30 692253 63 125593 561083 18.29 686676 64 123060 551960 18.23 675020 65 122725 548086 18.30 670811 66 120305 544903 18.09 665208 67 119088 532751 18.27 651839 68 118092 531130 18.19 649222 69 116583 534689 17.90 651272 70 112866 513480 18.02 626346 71 111557 510870 17.92 622427 72 110668 498264 18.17 608932 73 110875 499750 18.16 610625 74 107506 493646 17.88 601152 75 105515 490578 17.70 596093 76 104077 474754 17.98 578831 77 101863 468479 17.86 570342 78 101710 467527 17.87 569237 79 98220 446513 18.03 544733 80 95534 444755 17.68 540289 81 94595 439408 17.71 534003 82 91796 429889 17.60 521685 83 89667 424179 17.45 513846 84 88824 417137 17.56 505961 85 88148 409126 17.73 497274 86 87472 408924 17.62 496396 87 85642 406905 17.39 492547 88 83296 390119 17.59 473415 89 82555 384309 17.68 466864 90 81138 380849 17.56 461987 91 79031 374442 17.43 453473 92 77429 369398 17.33 446827 93 77310 373072 17.17 450382 94 75510 362336 17.25 437846 95 74394 354085 17.36 428479 96 72869 352656 17.12 425525 97 71484 341818 17.30 413302 98 72244 339917 17.53 412161 99 70975 333356 17.55 404331 100 69054 326867 17.44 395921 101 67536 325224 17.20 392760 102 65214 323443 16.78 388657 103 63305 313315 16.81 376620 104 62878 311995 16.77 374873 105 62233 302745 17.05 364978 106 60921 297525 17.00 358446 107 60428 293768 17.06 354196 108 58860 286871 17.02 345731 109 58866 280558 17.34 339424 110 60108 280918 17.63 341026 111 56578 274784 17.07 331362 112 54826 267591 17.00 322417 113 53631 263350 16.92 316981 114 52277 257622 16.87 309899 115 51694 252834 16.98 304528 116 50717 250401 16.84 301118 117 49842 247323 16.77 297165 118 48825 238940 16.97 287765 119 47863 235460 16.89 283323 120 47070 232137 16.86 279207 121 48012 229861 17.28 277873 122 47298 228417 17.15 275715 123 45820 223654 17.00 269474 124 46244 218552 17.46 264796 125 44499 216014 17.08 260513 126 42439 208739 16.90 251178 127 41157 200027 17.06 241184 128 40427 201794 16.69 242221 129 40162 199589 16.75 239751 130 39299 196387 16.67 235686 131 38614 195864 16.47 234478 132 39426 198186 16.59 237612 133 37828 190973 16.53 228801 134 36715 186545 16.44 223260 135 35269 179231 16.44 214500 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 19846 1297440 1.51 1317286 2 18046 1311165 1.36 1329211 3 16390 1362652 1.19 1379042 4 14467 1274773 1.12 1289240 5 14363 1291907 1.10 1306270 6 14307 1278652 1.11 1292959 7 13532 1292131 1.04 1305663 8 13646 1298184 1.04 1311830 9 13672 1304781 1.04 1318453 10 13435 1318135 1.01 1331570 11 13115 1312401 0.99 1325516 12 13496 1313771 1.02 1327267 13 13271 1319006 1.00 1332277 14 13646 1304288 1.04 1317934 15 13708 1313970 1.03 1327678 16 13531 1307777 1.02 1321308 17 13051 1298869 0.99 1311920 18 13492 1314075 1.02 1327567 19 13259 1328981 0.99 1342240 20 13313 1332722 0.99 1346035 21 13023 1291215 1.00 1304238 22 13361 1326476 1.00 1339837 23 12834 1294930 0.98 1307764 24 13787 1327752 1.03 1341539 25 13183 1292460 1.01 1305643 26 13604 1320416 1.02 1334020 27 13572 1306575 1.03 1320147 28 13380 1307027 1.01 1320407 29 13041 1278924 1.01 1291965 30 13559 1273424 1.05 1286983 31 13283 1261666 1.04 1274949 32 13223 1243159 1.05 1256382 33 13617 1249483 1.08 1263100 34 13762 1268138 1.07 1281900 35 13787 1252358 1.09 1266145 36 13907 1240746 1.11 1254653 37 13707 1234820 1.10 1248527 38 13821 1228828 1.11 1242649 39 13769 1198357 1.14 1212126 40 14074 1222263 1.14 1236337 41 13939 1204602 1.14 1218541 42 14321 1192786 1.19 1207107 43 14057 1181602 1.18 1195659 44 14196 1166961 1.20 1181157 45 14349 1174319 1.21 1188668 46 14514 1178797 1.22 1193311 47 14173 1155323 1.21 1169496 48 14066 1123837 1.24 1137903 49 13862 1121712 1.22 1135574 50 14031 1114497 1.24 1128528 51 14101 1102817 1.26 1116918 52 14130 1109972 1.26 1124102 53 14287 1084300 1.30 1098587 54 14148 1074654 1.30 1088802 55 14142 1076170 1.30 1090312 56 13976 1047490 1.32 1061466 57 13855 1036327 1.32 1050182 58 13797 1026549 1.33 1040346 59 13575 1010952 1.33 1024527 60 13737 999426 1.36 1013163 61 13608 998624 1.34 1012232 62 13588 970868 1.38 984456 63 13344 956764 1.38 970108 64 13315 950016 1.38 963331 65 13008 928929 1.38 941937 66 13508 946954 1.41 960462 67 13052 908903 1.42 921955 68 13045 901364 1.43 914409 69 12870 887813 1.43 900683 70 12711 886098 1.41 898809 71 12389 863610 1.41 875999 72 12473 854603 1.44 867076 73 12468 839202 1.46 851670 74 12363 827950 1.47 840313 75 12372 828161 1.47 840533 76 12357 813285 1.50 825642 77 11814 796640 1.46 808454 78 11881 796339 1.47 808220 79 12086 805325 1.48 817411 80 11488 746510 1.52 757998 81 11369 734732 1.52 746101 82 11390 740608 1.51 751998 83 10991 715970 1.51 726961 84 10912 706662 1.52 717574 85 11004 700123 1.55 711127 86 10837 694243 1.54 705080 87 11413 719970 1.56 731383 88 10356 667932 1.53 678288 89 10473 655376 1.57 665849 90 10165 641217 1.56 651382 91 9998 628778 1.57 638776 92 9854 616574 1.57 626428 93 9764 610044 1.58 619808 94 9511 600632 1.56 610143 95 9699 588293 1.62 597992 96 9321 585194 1.57 594515 97 9643 579571 1.64 589214 98 9076 564066 1.58 573142 99 9208 559066 1.62 568274 100 8914 541338 1.62 550252 101 8666 530326 1.61 538992 102 8593 526702 1.61 535295 103 8634 517814 1.64 526448 104 8343 510724 1.61 519067 105 8282 500019 1.63 508301 106 8294 492853 1.66 501147 107 8210 481733 1.68 489943 108 8173 484236 1.66 492409 109 7935 466434 1.67 474369 110 7664 463985 1.62 471649 111 7700 451154 1.68 458854 112 7375 446635 1.62 454010 113 7453 436815 1.68 444268 114 7201 434033 1.63 441234 115 7086 419982 1.66 427068 116 6980 413374 1.66 420354 117 7065 410720 1.69 417785 118 7255 409441 1.74 416696 119 6918 401116 1.70 408034 120 6555 389386 1.66 395941 121 6563 384540 1.68 391103 122 6698 382102 1.72 388800 123 6565 375257 1.72 381822 124 6312 365486 1.70 371798 125 6310 352735 1.76 359045 126 6221 349177 1.75 355398 127 6142 340125 1.77 346267 128 5963 327856 1.79 333819 129 6039 333184 1.78 339223 130 5713 326323 1.72 332036 131 5870 327817 1.76 333687 132 5766 318841 1.78 324607 133 6122 311724 1.93 317846 134 6377 301744 2.07 308121 135 6554 298731 2.15 305285 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 109027 3939731 2.69 4048758 2 113316 3892436 2.83 4005752 3 98289 3954943 2.42 4053232 4 108590 3987206 2.65 4095796 5 95958 4007114 2.34 4103072 6 102419 3841198 2.60 3943617 7 92491 3854399 2.34 3946890 8 102977 3865788 2.59 3968765 9 90026 3854954 2.28 3944980 10 99519 3920618 2.48 4020137 11 90886 3923496 2.26 4014382 12 98951 3902286 2.47 4001237 13 93821 3959849 2.31 4053670 14 102219 3986619 2.50 4088838 15 91827 3945729 2.27 4037556 16 97557 4002213 2.38 4099770 17 89027 3933076 2.21 4022103 18 89914 3932390 2.24 4022304 19 83847 3971456 2.07 4055303 20 88199 3930188 2.19 4018387 21 78366 3916701 1.96 3995067 22 84691 3935902 2.11 4020593 23 76490 3916295 1.92 3992785 24 81440 3882332 2.05 3963772 25 73814 3876840 1.87 3950654 26 80092 4013303 1.96 4093395 27 71425 3885314 1.81 3956739 28 80059 3885560 2.02 3965619 29 71215 3896749 1.79 3967964 30 76908 3889292 1.94 3966200 31 70465 3877898 1.78 3948363 32 75843 3885659 1.91 3961502 33 68885 3820741 1.77 3889626 34 73612 3845922 1.88 3919534 35 69119 3830988 1.77 3900107 36 71990 3797361 1.86 3869351 37 67439 3761174 1.76 3828613 38 69724 3745083 1.83 3814807 39 66255 3685509 1.77 3751764 40 67949 3659670 1.82 3727619 41 66459 3663521 1.78 3729980 42 66640 3619371 1.81 3686011 43 65109 3658600 1.75 3723709 44 67915 3646604 1.83 3714519 45 61727 3534886 1.72 3596613 46 64363 3522733 1.79 3587096 47 62422 3550838 1.73 3613260 48 62613 3421572 1.80 3484185 49 60590 3392330 1.75 3452920 50 62936 3361543 1.84 3424479 51 57906 3340016 1.70 3397922 52 62546 3362443 1.83 3424989 53 58321 3275870 1.75 3334191 54 59366 3294067 1.77 3353433 55 57566 3232795 1.75 3290361 56 58597 3172642 1.81 3231239 57 55104 3138420 1.73 3193524 58 56559 3134934 1.77 3191493 59 55044 3152769 1.72 3207813 60 55024 3048941 1.77 3103965 61 54178 3008313 1.77 3062491 62 53012 2992150 1.74 3045162 63 52711 3010739 1.72 3063450 64 52415 2961175 1.74 3013590 65 50966 2883771 1.74 2934737 66 50515 2851756 1.74 2902271 67 49837 2840400 1.72 2890237 68 50346 2742758 1.80 2793104 69 47533 2704575 1.73 2752108 70 48191 2675945 1.77 2724136 71 46358 2654165 1.72 2700523 72 47369 2601516 1.79 2648885 73 45544 2604138 1.72 2649682 74 47260 2576121 1.80 2623381 75 43715 2482160 1.73 2525875 76 45457 2463857 1.81 2509314 77 43978 2430641 1.78 2474619 78 43430 2391398 1.78 2434828 79 42846 2365065 1.78 2407911 80 43039 2345731 1.80 2388770 81 41469 2350302 1.73 2391771 82 41446 2309232 1.76 2350678 83 40862 2224883 1.80 2265745 84 39835 2183878 1.79 2223713 85 39899 2151537 1.82 2191436 86 39164 2127590 1.81 2166754 87 38231 2112266 1.78 2150497 88 39179 2112133 1.82 2151312 89 37621 2064107 1.79 2101728 90 37796 2063216 1.80 2101012 91 36534 1990810 1.80 2027344 92 36300 1953075 1.82 1989375 93 34752 1947210 1.75 1981962 94 35595 1883495 1.85 1919090 95 34171 1863313 1.80 1897484 96 35094 1871962 1.84 1907056 97 33470 1812023 1.81 1845493 98 33575 1774975 1.86 1808550 99 32699 1761097 1.82 1793796 100 32836 1722890 1.87 1755726 101 32055 1694094 1.86 1726149 102 31516 1667293 1.86 1698809 103 30787 1635212 1.85 1665999 104 31015 1615866 1.88 1646881 105 30322 1587510 1.87 1617832 106 29867 1564265 1.87 1594132 107 30346 1541454 1.93 1571800 108 28496 1507038 1.86 1535534 109 28778 1480866 1.91 1509644 110 28399 1457700 1.91 1486099 111 27261 1431495 1.87 1458756 112 27196 1416270 1.88 1443466 113 26663 1381273 1.89 1407936 114 26378 1359106 1.90 1385484 115 25859 1334748 1.90 1360607 116 26489 1324492 1.96 1350981 117 24653 1290595 1.87 1315248 118 25316 1269388 1.96 1294704 119 24510 1246248 1.93 1270758 120 24118 1222785 1.93 1246903 121 23639 1201494 1.93 1225133 122 23948 1184448 1.98 1208396 123 23208 1166784 1.95 1189992 124 23078 1135182 1.99 1158260 125 22133 1095292 1.98 1117425 126 21853 1060810 2.02 1082663 127 22182 1021988 2.12 1044170 128 21228 1000037 2.08 1021265 129 21402 981625 2.13 1003027 130 20901 967528 2.11 988429 131 21038 952275 2.16 973313 132 20965 941310 2.18 962275 133 21498 930974 2.26 952472 134 22428 924922 2.37 947350 135 22412 913212 2.40 935624 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 27428 145842 15.83 173270 2 30779 152445 16.80 183224 3 26390 140582 15.81 166972 4 25541 133588 16.05 159129 5 25414 131939 16.15 157353 6 24903 130600 16.01 155503 7 24634 127855 16.15 152489 8 23766 123051 16.19 146817 9 23836 125075 16.01 148911 10 24012 125135 16.10 149147 11 23622 119784 16.47 143406 12 22986 119579 16.12 142565 13 22377 114964 16.29 137341 14 21630 113465 16.01 135095 15 21774 110179 16.50 131953 16 20991 111181 15.88 132172 17 20913 107323 16.31 128236 18 19930 105620 15.87 125550 19 20009 103701 16.17 123710 20 19780 104025 15.98 123805 21 18970 107149 15.04 126119 22 18934 99334 16.01 118268 23 19264 97848 16.45 117112 24 18254 97068 15.83 115322 25 17743 91997 16.17 109740 26 17892 92378 16.23 110270 27 17353 91878 15.89 109231 28 17234 89089 16.21 106323 29 17308 87853 16.46 105161 30 16483 86673 15.98 103156 31 16125 84531 16.02 100656 32 16091 82196 16.37 98287 33 15589 81739 16.02 97328 34 15698 80535 16.31 96233 35 14988 78776 15.98 93764 36 14828 78535 15.88 93363 37 14347 76340 15.82 90687 38 14044 73614 16.02 87658 39 13808 73250 15.86 87058 40 13668 71912 15.97 85580 41 13478 70686 16.01 84164 42 13500 70891 16.00 84391 43 13132 68001 16.19 81133 44 12962 67367 16.14 80329 45 12468 67527 15.59 79995 46 12213 63708 16.09 75921 47 11731 62046 15.90 73777 48 11764 61670 16.02 73434 49 11381 60477 15.84 71858 50 11318 60090 15.85 71408 51 11093 58814 15.87 69907 52 11380 58236 16.35 69616 53 10412 56898 15.47 67310 54 10528 56642 15.67 67170 55 10343 54881 15.86 65224 56 10219 52844 16.20 63063 57 10036 52606 16.02 62642 58 9589 51448 15.71 61037 59 9403 49957 15.84 59360 60 9431 49517 16.00 58948 61 9158 48307 15.94 57465 62 8883 47564 15.74 56447 63 8835 46284 16.03 55119 64 8628 45535 15.93 54163 65 8608 46193 15.71 54801 66 8390 45320 15.62 53710 67 8536 43649 16.36 52185 68 8249 43139 16.05 51388 69 8105 42645 15.97 50750 70 8094 42189 16.10 50283 71 7617 40631 15.79 48248 72 7607 39867 16.02 47474 73 7668 39835 16.14 47503 74 7389 39501 15.76 46890 75 7152 38542 15.65 45694 76 7119 37066 16.11 44185 77 6879 36368 15.91 43247 78 6981 37078 15.84 44059 79 6656 34512 16.17 41168 80 6457 34001 15.96 40458 81 6315 34424 15.50 40739 82 6089 32467 15.79 38556 83 6012 32186 15.74 38198 84 5981 31489 15.96 37470 85 5821 31052 15.79 36873 86 5885 31152 15.89 37037 87 5545 31232 15.08 36777 88 5554 29647 15.78 35201 89 5457 29170 15.76 34627 90 5425 28639 15.93 34064 91 5302 28120 15.86 33422 92 5088 27293 15.71 32381 93 5038 28118 15.19 33156 94 4820 26776 15.26 31596 95 4907 26221 15.76 31128 96 4684 25580 15.48 30264 97 4658 24878 15.77 29536 98 4518 24974 15.32 29492 99 4680 24333 16.13 29013 100 4533 23782 16.01 28315 101 4333 23688 15.46 28021 102 4107 23536 14.86 27643 103 4081 22998 15.07 27079 104 4039 22593 15.17 26632 105 3941 21590 15.44 25531 106 3925 21411 15.49 25336 107 4009 21344 15.81 25353 108 3714 20394 15.41 24108 109 3846 20445 15.83 24291 110 3915 20703 15.90 24618 111 3638 20032 15.37 23670 112 3425 19390 15.01 22815 113 3474 18870 15.55 22344 114 3276 18269 15.21 21545 115 3213 18266 14.96 21479 116 3281 17987 15.43 21268 117 3183 17745 15.21 20928 118 3034 17105 15.07 20139 119 2978 16956 14.94 19934 120 2917 16731 14.85 19648 121 3046 16378 15.68 19424 122 2962 15989 15.63 18951 123 2961 15875 15.72 18836 124 2879 15848 15.37 18727 125 2967 15643 15.94 18610 126 2665 14585 15.45 17250 127 2551 14076 15.34 16627 128 2494 14256 14.89 16750 129 2441 14094 14.76 16535 130 2543 13814 15.55 16357 131 2473 14381 14.67 16854 132 2583 14249 15.35 16832 133 2300 13308 14.74 15608 134 2320 13056 15.09 15376 135 2116 12551 14.43 14667 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 6499 240670 2.63 247169 2 5627 240350 2.29 245977 3 4010 253359 1.56 257369 4 3520 224420 1.54 227940 5 3404 229900 1.46 233304 6 3088 216072 1.41 219160 7 2889 211842 1.35 214731 8 2897 211307 1.35 214204 9 2730 203402 1.32 206132 10 2649 207111 1.26 209760 11 2552 203707 1.24 206259 12 2585 200865 1.27 203450 13 2578 198409 1.28 200987 14 2660 194089 1.35 196749 15 2901 195884 1.46 198785 16 2584 183821 1.39 186405 17 2469 177776 1.37 180245 18 2172 180169 1.19 182341 19 2114 179626 1.16 181740 20 2152 175820 1.21 177972 21 1899 168193 1.12 170092 22 1834 170810 1.06 172644 23 1687 163725 1.02 165412 24 1765 166365 1.05 168130 25 1588 156745 1.00 158333 26 1555 163042 0.94 164597 27 1589 155194 1.01 156783 28 1513 153518 0.98 155031 29 1421 146489 0.96 147910 30 1398 146522 0.95 147920 31 1380 141287 0.97 142667 32 1301 138268 0.93 139569 33 1287 138526 0.92 139813 34 1274 137807 0.92 139081 35 1259 134622 0.93 135881 36 1257 135092 0.92 136349 37 1249 128978 0.96 130227 38 1210 127196 0.94 128406 39 1188 121475 0.97 122663 40 1168 123675 0.94 124843 41 1193 121339 0.97 122532 42 1156 118198 0.97 119354 43 1106 113682 0.96 114788 44 1089 111958 0.96 113047 45 1072 113517 0.94 114589 46 1056 111610 0.94 112666 47 1060 111625 0.94 112685 48 1096 103772 1.05 104868 49 1033 102018 1.00 103051 50 1038 101755 1.01 102793 51 1004 99947 0.99 100951 52 968 100209 0.96 101177 53 897 96896 0.92 97793 54 949 95395 0.99 96344 55 905 94487 0.95 95392 56 924 92105 0.99 93029 57 913 91553 0.99 92466 58 885 88976 0.98 89861 59 890 86502 1.02 87392 60 864 85315 1.00 86179 61 853 84286 1.00 85139 62 883 82087 1.06 82970 63 779 79069 0.98 79848 64 800 79331 1.00 80131 65 742 76855 0.96 77597 66 814 77965 1.03 78779 67 716 73372 0.97 74088 68 691 76265 0.90 76956 69 696 71499 0.96 72195 70 664 70536 0.93 71200 71 677 68590 0.98 69267 72 689 68224 1.00 68913 73 662 66760 0.98 67422 74 647 65776 0.97 66423 75 641 65221 0.97 65862 76 659 64053 1.02 64712 77 645 62756 1.02 63401 78 624 64225 0.96 64849 79 645 64175 1.00 64820 80 587 58229 1.00 58816 81 543 56308 0.96 56851 82 576 56863 1.00 57439 83 543 54881 0.98 55424 84 501 54067 0.92 54568 85 529 52828 0.99 53357 86 547 53307 1.02 53854 87 550 56160 0.97 56710 88 477 50945 0.93 51422 89 493 50406 0.97 50899 90 484 48245 0.99 48729 91 445 47253 0.93 47698 92 449 46597 0.95 47046 93 473 45494 1.03 45967 94 449 44898 0.99 45347 95 449 43636 1.02 44085 96 443 43411 1.01 43854 97 444 42455 1.03 42899 98 359 41829 0.85 42188 99 408 42086 0.96 42494 100 398 40250 0.98 40648 101 378 39130 0.96 39508 102 366 39143 0.93 39509 103 410 38478 1.05 38888 104 396 37784 1.04 38180 105 369 36643 1.00 37012 106 425 36368 1.16 36793 107 343 35220 0.96 35563 108 359 35495 1.00 35854 109 333 33892 0.97 34225 110 408 35241 1.14 35649 111 324 33146 0.97 33470 112 335 32604 1.02 32939 113 311 31818 0.97 32129 114 328 31427 1.03 31755 115 318 30068 1.05 30386 116 285 30060 0.94 30345 117 297 29653 0.99 29950 118 311 29677 1.04 29988 119 298 28770 1.03 29068 120 225 28375 0.79 28600 121 274 27723 0.98 27997 122 274 27608 0.98 27882 123 253 26423 0.95 26676 124 259 26148 0.98 26407 125 219 25169 0.86 25388 126 244 24421 0.99 24665 127 245 23882 1.02 24127 128 259 23512 1.09 23771 129 245 23760 1.02 24005 130 229 23389 0.97 23618 131 263 23635 1.10 23898 132 259 22793 1.12 23052 133 243 21798 1.10 22041 134 258 20877 1.22 21135 135 249 20993 1.17 21242 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 37840 816148 4.43 853988 2 37037 796654 4.44 833691 3 32977 795636 3.98 828613 4 33645 787931 4.10 821576 5 30717 773518 3.82 804235 6 29926 718590 4.00 748516 7 27378 707474 3.73 734852 8 29289 697114 4.03 726403 9 25522 689936 3.57 715458 10 27073 688397 3.78 715470 11 24919 677241 3.55 702160 12 26194 659890 3.82 686084 13 26816 659144 3.91 685960 14 28617 648484 4.23 677101 15 26741 637850 4.02 664591 16 25016 638984 3.77 664000 17 21490 613973 3.38 635463 18 18870 605982 3.02 624852 19 17328 596791 2.82 614119 20 16127 581911 2.70 598038 21 13465 574393 2.29 587858 22 13493 567923 2.32 581416 23 11653 556561 2.05 568214 24 12204 546475 2.18 558679 25 10492 534231 1.93 544723 26 10973 547001 1.97 557974 27 9517 521217 1.79 530734 28 11056 517806 2.09 528862 29 9064 508151 1.75 517215 30 10163 503514 1.98 513677 31 8760 493578 1.74 502338 32 9559 486282 1.93 495841 33 8199 473851 1.70 482050 34 8999 470346 1.88 479345 35 8408 463692 1.78 472100 36 8672 455949 1.87 464621 37 7889 445865 1.74 453754 38 7998 438651 1.79 446649 39 7820 424387 1.81 432207 40 7580 415511 1.79 423091 41 7516 411369 1.79 418885 42 7665 403692 1.86 411357 43 7465 407273 1.80 414738 44 7651 402709 1.86 410360 45 6339 385898 1.62 392237 46 7209 379165 1.87 386374 47 6607 379590 1.71 386197 48 6961 360916 1.89 367877 49 6248 354144 1.73 360392 50 7034 349193 1.97 356227 51 5407 345410 1.54 350817 52 7086 347838 2.00 354924 53 5790 333507 1.71 339297 54 6280 334489 1.84 340769 55 5739 325212 1.73 330951 56 5924 317602 1.83 323526 57 5637 314969 1.76 320606 58 5880 311917 1.85 317797 59 5264 312774 1.66 318038 60 5363 298936 1.76 304299 61 5261 292201 1.77 297462 62 4883 291727 1.65 296610 63 4970 293436 1.67 298406 64 4828 287043 1.65 291871 65 4804 277680 1.70 282484 66 4670 274163 1.67 278833 67 4499 272755 1.62 277254 68 4851 260335 1.83 265186 69 4205 256103 1.62 260308 70 4483 251396 1.75 255879 71 4105 248451 1.63 252556 72 4321 243673 1.74 247994 73 3719 242756 1.51 246475 74 4384 239110 1.80 243494 75 3474 230320 1.49 233794 76 4089 227892 1.76 231981 77 3686 224098 1.62 227784 78 3610 218408 1.63 222018 79 3627 217268 1.64 220895 80 3568 214118 1.64 217686 81 3324 215385 1.52 218709 82 3547 211262 1.65 214809 83 3617 200991 1.77 204608 84 3015 196922 1.51 199937 85 3337 194082 1.69 197419 86 3148 192309 1.61 195457 87 3019 189507 1.57 192526 88 2939 190323 1.52 193262 89 2922 184412 1.56 187334 90 3019 183994 1.61 187013 91 2833 176848 1.58 179681 92 2788 173387 1.58 176175 93 2579 173220 1.47 175799 94 2913 166661 1.72 169574 95 2425 165076 1.45 167501 96 2799 166038 1.66 168837 97 2367 160221 1.46 162588 98 2511 156086 1.58 158597 99 2237 154988 1.42 157225 100 2414 152679 1.56 155093 101 2345 149189 1.55 151534 102 2185 146656 1.47 148841 103 2237 143694 1.53 145931 104 2196 141174 1.53 143370 105 2191 137947 1.56 140138 106 2023 134989 1.48 137012 107 2251 133726 1.66 135977 108 1924 131666 1.44 133590 109 2080 129148 1.59 131228 110 1920 126961 1.49 128881 111 1808 123668 1.44 125476 112 1959 122469 1.57 124428 113 1788 119391 1.48 121179 114 1789 118428 1.49 120217 115 1721 116395 1.46 118116 116 1839 115671 1.56 117510 117 1530 111503 1.35 113033 118 1782 110501 1.59 112283 119 1535 108750 1.39 110285 120 1622 106459 1.50 108081 121 1487 104283 1.41 105770 122 1536 102858 1.47 104394 123 1531 101536 1.49 103067 124 1574 98413 1.57 99987 125 1431 93953 1.50 95384 126 1338 91086 1.45 92424 127 1452 87852 1.63 89304 128 1206 85858 1.39 87064 129 1392 84278 1.62 85670 130 1298 82612 1.55 83910 131 1330 80466 1.63 81796 132 1317 79537 1.63 80854 133 1256 78832 1.57 80088 134 1329 77574 1.68 78903 135 1223 77044 1.56 78267