CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 156793 630145 19.92 786938 2 159814 644396 19.87 804210 3 157128 646889 19.54 804017 4 153237 624229 19.71 777466 5 159323 638660 19.97 797983 6 160942 648371 19.89 809313 7 160551 639386 20.07 799937 8 161354 639836 20.14 801190 9 161990 647218 20.02 809208 10 163545 644601 20.24 808146 11 163176 637061 20.39 800237 12 162818 644062 20.18 806880 13 161813 633935 20.33 795748 14 163424 633387 20.51 796811 15 161974 640310 20.19 802284 16 162007 644015 20.10 806022 17 162873 640982 20.26 803855 18 162545 642280 20.20 804825 19 163557 637406 20.42 800963 20 164088 639530 20.42 803618 21 163427 659116 19.87 822543 22 162227 636066 20.32 798293 23 164081 642409 20.35 806490 24 163816 645984 20.23 809800 25 161821 629484 20.45 791305 26 165008 633948 20.65 798956 27 163195 637226 20.39 800421 28 162730 629465 20.54 792195 29 165501 637454 20.61 802955 30 161517 632235 20.35 793752 31 162267 625906 20.59 788173 32 161038 624933 20.49 785971 33 162209 631333 20.44 793542 34 162039 623963 20.62 786002 35 160236 630308 20.27 790544 36 158716 623790 20.28 782506 37 155725 618131 20.12 773856 38 156854 608170 20.50 765024 39 155832 609766 20.35 765598 40 154909 605744 20.37 760653 41 156248 603322 20.57 759570 42 154998 607379 20.33 762377 43 152933 599441 20.33 752374 44 151704 597640 20.24 749344 45 150314 596180 20.14 746494 46 149146 582299 20.39 731445 47 148463 578174 20.43 726637 48 146924 576769 20.30 723693 49 146350 575377 20.28 721727 50 146080 569286 20.42 715366 51 144343 571226 20.17 715569 52 144131 561064 20.44 705195 53 141572 560308 20.17 701880 54 139690 555773 20.09 695463 55 137721 545956 20.14 683677 56 137016 534813 20.39 671829 57 135471 534608 20.22 670079 58 133507 521260 20.39 654767 59 132359 518197 20.35 650556 60 130480 514117 20.24 644597 61 128179 506486 20.20 634665 62 127814 500120 20.35 627934 63 126070 495327 20.29 621397 64 123730 488626 20.21 612356 65 123383 485070 20.28 608453 66 122008 481009 20.23 603017 67 119775 471009 20.27 590784 68 118787 468621 20.22 587408 69 116612 468107 19.94 584719 70 113514 454419 19.99 567933 71 113172 451872 20.03 565044 72 112153 441969 20.24 554122 73 110529 441719 20.01 552248 74 108606 433817 20.02 542423 75 107059 429909 19.94 536968 76 105767 418281 20.18 524048 77 103616 411939 20.10 515555 78 102758 407794 20.13 510552 79 98616 393110 20.06 491726 80 97468 390646 19.97 488114 81 95252 385106 19.83 480358 82 93367 377479 19.83 470846 83 91919 370491 19.88 462410 84 90599 364953 19.89 455552 85 88535 357115 19.87 445650 86 88761 354817 20.01 443578 87 86076 351178 19.69 437254 88 84549 340682 19.88 425231 89 83182 335143 19.88 418325 90 81939 331142 19.84 413081 91 80381 325574 19.80 405955 92 77934 319433 19.61 397367 93 77367 318466 19.55 395833 94 75427 310284 19.56 385711 95 74002 303869 19.58 377871 96 72729 301250 19.45 373979 97 71287 293539 19.54 364826 98 71099 289336 19.73 360435 99 69158 283733 19.60 352891 100 68018 278134 19.65 346152 101 66792 276314 19.47 343106 102 65236 272471 19.32 337707 103 63091 265226 19.22 328317 104 62407 264382 19.10 326789 105 61451 254960 19.42 316411 106 60090 250886 19.32 310976 107 59391 245594 19.47 304985 108 57945 240231 19.43 298176 109 57164 236013 19.50 293177 110 56709 231472 19.68 288181 111 54847 228065 19.39 282912 112 52944 222114 19.25 275058 113 52181 217320 19.36 269501 114 50884 212665 19.31 263549 115 49595 207385 19.30 256980 116 48910 205882 19.20 254792 117 48006 201935 19.21 249941 118 47090 196658 19.32 243748 119 45726 192427 19.20 238153 120 45236 189225 19.29 234461 121 45163 185393 19.59 230556 122 43927 183328 19.33 227255 123 42866 179717 19.26 222583 124 42378 175786 19.42 218164 125 41746 171542 19.57 213288 126 39909 166835 19.30 206744 127 38532 160583 19.35 199115 128 37969 159731 19.21 197700 129 37088 157461 19.06 194549 130 36803 154214 19.27 191017 131 36312 153809 19.10 190121 132 36246 152412 19.21 188658 133 35089 148849 19.08 183938 134 33666 145226 18.82 178892 135 33022 139436 19.15 172458 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 38479 1097459 3.39 1135938 2 28782 1125590 2.49 1154372 3 28828 1159829 2.43 1188657 4 26187 1090924 2.34 1117111 5 25803 1102067 2.29 1127870 6 25318 1099326 2.25 1124644 7 24306 1118295 2.13 1142601 8 23991 1119694 2.10 1143685 9 23437 1108429 2.07 1131866 10 23922 1118473 2.09 1142395 11 22960 1107492 2.03 1130452 12 23304 1104155 2.07 1127459 13 23499 1120996 2.05 1144495 14 22836 1112864 2.01 1135700 15 22814 1117938 2.00 1140752 16 22863 1116145 2.01 1139008 17 22636 1104717 2.01 1127353 18 22937 1122843 2.00 1145780 19 22739 1125483 1.98 1148222 20 22416 1121323 1.96 1143739 21 22411 1106486 1.99 1128897 22 22807 1132297 1.97 1155104 23 22421 1114110 1.97 1136531 24 23060 1137305 1.99 1160365 25 22740 1114465 2.00 1137205 26 22581 1128662 1.96 1151243 27 22529 1117976 1.98 1140505 28 22594 1123439 1.97 1146033 29 22202 1105769 1.97 1127971 30 22680 1109982 2.00 1132662 31 22669 1101333 2.02 1124002 32 22388 1088212 2.02 1110600 33 22759 1087872 2.05 1110631 34 22834 1106403 2.02 1129237 35 22943 1087937 2.07 1110880 36 23106 1087694 2.08 1110800 37 23091 1086796 2.08 1109887 38 22731 1081727 2.06 1104458 39 22803 1061058 2.10 1083861 40 23188 1074702 2.11 1097890 41 22850 1059255 2.11 1082105 42 23081 1058622 2.13 1081703 43 23133 1048829 2.16 1071962 44 23111 1037424 2.18 1060535 45 23190 1041719 2.18 1064909 46 23582 1045164 2.21 1068746 47 23184 1029573 2.20 1052757 48 23326 1008551 2.26 1031877 49 23136 1005168 2.25 1028304 50 23552 1000477 2.30 1024029 51 23431 991707 2.31 1015138 52 23220 995568 2.28 1018788 53 22925 971345 2.31 994270 54 23196 968592 2.34 991788 55 23524 966582 2.38 990106 56 23079 945741 2.38 968820 57 22696 935657 2.37 958353 58 23216 929289 2.44 952505 59 23026 914841 2.46 937867 60 23041 904634 2.48 927675 61 22820 899261 2.47 922081 62 22615 881953 2.50 904568 63 22512 869949 2.52 892461 64 22326 867097 2.51 889423 65 22343 848327 2.57 870670 66 22644 856021 2.58 878665 67 21886 828805 2.57 850691 68 21937 817805 2.61 839742 69 21470 805621 2.60 827091 70 22031 801816 2.67 823847 71 21398 783338 2.66 804736 72 21095 778690 2.64 799785 73 21346 765669 2.71 787015 74 21386 753931 2.76 775317 75 20852 750369 2.70 771221 76 20764 740759 2.73 761523 77 20796 721537 2.80 742333 78 20473 717458 2.77 737931 79 20641 710518 2.82 731159 80 19877 681423 2.83 701300 81 19715 672062 2.85 691777 82 19727 667819 2.87 687546 83 19082 647833 2.86 666915 84 19070 639804 2.89 658874 85 19002 633811 2.91 652813 86 18914 623165 2.95 642079 87 19167 628662 2.96 647829 88 18231 599752 2.95 617983 89 17658 585526 2.93 603184 90 17451 572853 2.96 590304 91 17415 562667 3.00 580082 92 17137 554094 3.00 571231 93 16966 543799 3.03 560765 94 16713 535917 3.02 552630 95 16461 525739 3.04 542200 96 16516 518469 3.09 534985 97 16059 512185 3.04 528244 98 15793 496879 3.08 512672 99 15655 491202 3.09 506857 100 15515 478774 3.14 494289 101 15237 469436 3.14 484673 102 14868 462616 3.11 477484 103 14725 453985 3.14 468710 104 14485 446240 3.14 460725 105 13999 437558 3.10 451557 106 13881 430084 3.13 443965 107 13786 420404 3.18 434190 108 14153 418002 3.27 432155 109 13547 402674 3.25 416221 110 13081 398562 3.18 411643 111 12988 389346 3.23 402334 112 12961 386325 3.25 399286 113 12737 374473 3.29 387210 114 12462 369203 3.27 381665 115 12342 360217 3.31 372559 116 11892 351899 3.27 363791 117 11914 348606 3.30 360520 118 11999 345042 3.36 357041 119 11600 334749 3.35 346349 120 11298 327514 3.33 338812 121 11237 319721 3.40 330958 122 11179 316213 3.41 327392 123 10751 307624 3.38 318375 124 10645 301529 3.41 312174 125 10679 291998 3.53 302677 126 10547 287350 3.54 297897 127 10153 277773 3.53 287926 128 9924 268772 3.56 278696 129 9950 272574 3.52 282524 130 9725 266504 3.52 276229 131 10101 262489 3.71 272590 132 10029 257844 3.74 267873 133 10395 253338 3.94 263733 134 10863 245997 4.23 256860 135 10483 241083 4.17 251566 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 168714 3191517 5.02 3360231 2 132463 3197435 3.98 3329898 3 128211 3200864 3.85 3329075 4 130400 3213186 3.90 3343586 5 123360 3218064 3.69 3341424 6 122869 3140712 3.76 3263581 7 114580 3153167 3.51 3267747 8 118348 3183591 3.58 3301939 9 112210 3160757 3.43 3272967 10 116847 3199002 3.52 3315849 11 111137 3206169 3.35 3317306 12 112528 3197321 3.40 3309849 13 109942 3244770 3.28 3354712 14 112371 3268727 3.32 3381098 15 108041 3247251 3.22 3355292 16 111283 3256179 3.30 3367462 17 108085 3231243 3.24 3339328 18 107917 3232909 3.23 3340826 19 104441 3251359 3.11 3355800 20 105507 3232334 3.16 3337841 21 101028 3237807 3.03 3338835 22 104610 3255098 3.11 3359708 23 101582 3251619 3.03 3353201 24 103533 3239346 3.10 3342879 25 99398 3243923 2.97 3343321 26 102296 3310735 3.00 3413031 27 96845 3249692 2.89 3346537 28 100844 3250992 3.01 3351836 29 98422 3260828 2.93 3359250 30 99524 3264954 2.96 3364478 31 97359 3267408 2.89 3364767 32 99116 3259105 2.95 3358221 33 95442 3222940 2.88 3318382 34 96728 3236556 2.90 3333284 35 95277 3234100 2.86 3329377 36 96834 3214791 2.92 3311625 37 95340 3191816 2.90 3287156 38 95657 3183791 2.92 3279448 39 92615 3151705 2.85 3244320 40 93044 3136600 2.88 3229644 41 92756 3135807 2.87 3228563 42 93087 3107233 2.91 3200320 43 93829 3123421 2.92 3217250 44 94601 3111850 2.95 3206451 45 90677 3047578 2.89 3138255 46 91324 3036442 2.92 3127766 47 90548 3041916 2.89 3132464 48 90152 2966015 2.95 3056167 49 89718 2945498 2.96 3035216 50 90420 2922748 3.00 3013168 51 86953 2904509 2.91 2991462 52 89452 2904213 2.99 2993665 53 87557 2852725 2.98 2940282 54 87999 2848782 3.00 2936781 55 86956 2815115 3.00 2902071 56 87330 2769198 3.06 2856528 57 85348 2740323 3.02 2825671 58 85655 2732461 3.04 2818116 59 85022 2724699 3.03 2809721 60 84287 2661785 3.07 2746072 61 83149 2630776 3.06 2713925 62 82946 2615956 3.07 2698902 63 82661 2602992 3.08 2685653 64 82315 2566364 3.11 2648679 65 80928 2512220 3.12 2593148 66 79748 2485411 3.11 2565159 67 79346 2464906 3.12 2544252 68 78676 2403055 3.17 2481731 69 77067 2363531 3.16 2440598 70 77636 2334108 3.22 2411744 71 75559 2311565 3.17 2387124 72 75953 2269545 3.24 2345498 73 74449 2256407 3.19 2330856 74 75517 2223036 3.29 2298553 75 72762 2167220 3.25 2239982 76 73706 2144796 3.32 2218502 77 72535 2114251 3.32 2186786 78 71330 2078878 3.32 2150208 79 71226 2056748 3.35 2127974 80 70730 2031091 3.37 2101821 81 68802 2016055 3.30 2084857 82 68787 1979059 3.36 2047846 83 68156 1922294 3.42 1990450 84 66917 1885635 3.43 1952552 85 66735 1856721 3.47 1923456 86 65439 1831859 3.45 1897298 87 63622 1812140 3.39 1875762 88 64350 1798454 3.45 1862804 89 63018 1758924 3.46 1821942 90 62259 1736210 3.46 1798469 91 61110 1690548 3.49 1751658 92 60730 1656244 3.54 1716974 93 58484 1636199 3.45 1694683 94 59009 1598153 3.56 1657162 95 57899 1576480 3.54 1634379 96 58288 1564505 3.59 1622793 97 56129 1525555 3.55 1581684 98 56593 1494497 3.65 1551090 99 54834 1471032 3.59 1525866 100 54254 1443089 3.62 1497343 101 53227 1415929 3.62 1469156 102 52762 1391821 3.65 1444583 103 51898 1362277 3.67 1414175 104 51977 1339084 3.74 1391061 105 50371 1309911 3.70 1360282 106 49950 1286166 3.74 1336116 107 49114 1263432 3.74 1312546 108 47740 1237067 3.72 1284807 109 47503 1213536 3.77 1261039 110 47599 1191861 3.84 1239460 111 45864 1165291 3.79 1211155 112 45157 1147705 3.79 1192862 113 44555 1121134 3.82 1165689 114 44043 1098818 3.85 1142861 115 42962 1078509 3.83 1121471 116 42861 1059738 3.89 1102599 117 41674 1035880 3.87 1077554 118 41326 1015404 3.91 1056730 119 40761 995277 3.93 1036038 120 40024 974759 3.94 1014783 121 39218 955062 3.94 994280 122 38923 936214 3.99 975137 123 38134 917773 3.99 955907 124 37849 891015 4.07 928864 125 37342 862423 4.15 899765 126 36395 833038 4.19 869433 127 36066 799734 4.32 835800 128 35091 782452 4.29 817543 129 34814 764607 4.35 799421 130 34828 751779 4.43 786607 131 34841 740693 4.49 775534 132 34816 731062 4.55 765878 133 35691 723613 4.70 759304 134 37824 716542 5.01 754366 135 37234 705191 5.02 742425 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 24969 103753 19.40 128722 2 24327 108721 18.28 133048 3 23314 102530 18.53 125844 4 21699 97840 18.15 119539 5 21749 96711 18.36 118460 6 21992 96217 18.60 118209 7 21063 92374 18.57 113437 8 20270 89682 18.44 109952 9 20343 88682 18.66 109025 10 20440 87194 18.99 107634 11 19798 84107 19.05 103905 12 19329 83467 18.80 102796 13 19025 80915 19.04 99940 14 18948 78827 19.38 97775 15 18275 78698 18.85 96973 16 17443 76438 18.58 93881 17 16791 74851 18.32 91642 18 16736 73567 18.53 90303 19 16675 72084 18.79 88759 20 16206 71028 18.58 87234 21 15656 71956 17.87 87612 22 15295 68070 18.35 83365 23 15131 66615 18.51 81746 24 14819 65859 18.37 80678 25 14464 62767 18.73 77231 26 14511 62265 18.90 76776 27 14040 61948 18.48 75988 28 13635 59964 18.53 73599 29 13766 59287 18.84 73053 30 13270 57944 18.63 71214 31 12684 56404 18.36 69088 32 12295 55308 18.19 67603 33 12263 54028 18.50 66291 34 12180 52479 18.84 64659 35 11952 52260 18.61 64212 36 11607 51352 18.44 62959 37 11023 48894 18.40 59917 38 10791 48084 18.33 58875 39 10516 47479 18.13 57995 40 10471 45877 18.58 56348 41 10454 45529 18.67 55983 42 10346 44265 18.94 54611 43 10039 43472 18.76 53511 44 9753 42638 18.62 52391 45 9478 41711 18.52 51189 46 9189 39779 18.77 48968 47 8795 39260 18.30 48055 48 8879 38835 18.61 47714 49 8730 37733 18.79 46463 50 8488 37017 18.65 45505 51 8309 36526 18.53 44835 52 8173 35605 18.67 43778 53 8017 34565 18.83 42582 54 7694 33982 18.46 41676 55 7422 32788 18.46 40210 56 7622 31986 19.24 39608 57 7296 31632 18.74 38928 58 7212 30502 19.12 37714 59 7084 30051 19.08 37135 60 6915 29322 19.08 36237 61 6613 28724 18.71 35337 62 6462 28162 18.66 34624 63 6224 27689 18.35 33913 64 6227 26985 18.75 33212 65 6098 26601 18.65 32699 66 5816 25854 18.36 31670 67 5873 25032 19.00 30905 68 5806 24920 18.90 30726 69 5660 24511 18.76 30171 70 5471 23685 18.76 29156 71 5290 23025 18.68 28315 72 5279 22549 18.97 27828 73 5283 22101 19.29 27384 74 5050 21785 18.82 26835 75 5123 21605 19.17 26728 76 4859 20659 19.04 25518 77 4691 19836 19.13 24527 78 4754 20253 19.01 25007 79 4354 18805 18.80 23159 80 4320 18735 18.74 23055 81 4264 18276 18.92 22540 82 4108 17435 19.07 21543 83 4029 17335 18.86 21364 84 4000 17136 18.93 21136 85 3842 16699 18.70 20541 86 3771 16509 18.59 20280 87 3625 16105 18.37 19730 88 3606 15356 19.02 18962 89 3566 15136 19.07 18702 90 3519 14865 19.14 18384 91 3332 14352 18.84 17684 92 3065 14298 17.65 17363 93 3332 14402 18.79 17734 94 3164 13695 18.77 16859 95 3108 13134 19.14 16242 96 3003 13169 18.57 16172 97 2864 12472 18.68 15336 98 2895 12277 19.08 15172 99 2788 12033 18.81 14821 100 2780 11700 19.20 14480 101 2630 11527 18.58 14157 102 2633 11420 18.74 14053 103 2503 11111 18.39 13614 104 2495 10714 18.89 13209 105 2453 10709 18.64 13162 106 2276 10161 18.30 12437 107 2355 10041 19.00 12396 108 2280 9858 18.78 12138 109 2294 9535 19.39 11829 110 2346 9432 19.92 11778 111 2124 9236 18.70 11360 112 1970 9019 17.93 10989 113 1989 8680 18.64 10669 114 1885 8306 18.50 10191 115 1923 8156 19.08 10079 116 1851 8126 18.55 9977 117 1884 7978 19.10 9862 118 1768 7690 18.69 9458 119 1753 7503 18.94 9256 120 1624 7410 17.98 9034 121 1700 7199 19.10 8899 122 1623 7097 18.61 8720 123 1644 7050 18.91 8694 124 1695 6918 19.68 8613 125 1587 6626 19.32 8213 126 1364 6427 17.51 7791 127 1476 5966 19.83 7442 128 1364 5873 18.85 7237 129 1354 5815 18.89 7169 130 1279 5785 18.11 7064 131 1299 5706 18.54 7005 132 1283 5988 17.65 7271 133 1177 5485 17.67 6662 134 1099 5249 17.31 6348 135 1212 5157 19.03 6369 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 13058 177486 6.85 190544 2 7529 183791 3.94 191320 3 7444 192192 3.73 199636 4 6343 166488 3.67 172831 5 6213 166801 3.59 173014 6 5474 159791 3.31 165265 7 4911 160070 2.98 164981 8 4589 158212 2.82 162801 9 4399 151550 2.82 155949 10 4479 150480 2.89 154959 11 4251 145727 2.83 149978 12 4505 144372 3.03 148877 13 4519 144649 3.03 149168 14 3859 140714 2.67 144573 15 3762 138481 2.64 142243 16 3550 133072 2.60 136622 17 3313 128814 2.51 132127 18 3303 129973 2.48 133276 19 3165 127452 2.42 130617 20 2930 125770 2.28 128700 21 2801 119691 2.29 122492 22 2701 121844 2.17 124545 23 2689 116798 2.25 119487 24 2564 118995 2.11 121559 25 2363 111763 2.07 114126 26 2391 112778 2.08 115169 27 2300 108102 2.08 110402 28 2244 107505 2.04 109749 29 2099 102727 2.00 104826 30 2091 102023 2.01 104114 31 1983 99104 1.96 101087 32 1900 96170 1.94 98070 33 1990 95010 2.05 97000 34 1937 95156 1.99 97093 35 1864 91432 2.00 93296 36 1848 90763 2.00 92611 37 1755 87431 1.97 89186 38 1726 86445 1.96 88171 39 1638 82742 1.94 84380 40 1669 82437 1.98 84106 41 1593 80117 1.95 81710 42 1546 78616 1.93 80162 43 1559 76477 2.00 78036 44 1528 74561 2.01 76089 45 1469 74435 1.94 75904 46 1517 72311 2.05 73828 47 1451 71543 1.99 72994 48 1442 68508 2.06 69950 49 1382 66300 2.04 67682 50 1287 65812 1.92 67099 51 1355 64617 2.05 65972 52 1330 64177 2.03 65507 53 1256 61328 2.01 62584 54 1213 60701 1.96 61914 55 1195 59672 1.96 60867 56 1251 58171 2.11 59422 57 1171 57305 2.00 58476 58 1171 55881 2.05 57052 59 1133 54101 2.05 55234 60 1102 52680 2.05 53782 61 1030 51911 1.95 52941 62 1080 50845 2.08 51925 63 975 49066 1.95 50041 64 1039 48347 2.10 49386 65 966 47193 2.01 48159 66 1046 47022 2.18 48068 67 925 44520 2.04 45445 68 933 44590 2.05 45523 69 954 42720 2.18 43674 70 907 42381 2.10 43288 71 906 40760 2.17 41666 72 908 40714 2.18 41622 73 833 39784 2.05 40617 74 837 38711 2.12 39548 75 784 38448 2.00 39232 76 805 37933 2.08 38738 77 801 36570 2.14 37371 78 771 36617 2.06 37388 79 792 36573 2.12 37365 80 710 33133 2.10 33843 81 716 32859 2.13 33575 82 727 32703 2.17 33430 83 705 31200 2.21 31905 84 646 30359 2.08 31005 85 666 30579 2.13 31245 86 627 29506 2.08 30133 87 605 30189 1.96 30794 88 639 28129 2.22 28768 89 605 27197 2.18 27802 90 585 26224 2.18 26809 91 560 25684 2.13 26244 92 542 25269 2.10 25811 93 514 24725 2.04 25239 94 519 24159 2.10 24678 95 529 23529 2.20 24058 96 499 23337 2.09 23836 97 496 22849 2.12 23345 98 477 22007 2.12 22484 99 458 21827 2.06 22285 100 461 21143 2.13 21604 101 511 20291 2.46 20802 102 424 20001 2.08 20425 103 446 19719 2.21 20165 104 396 19400 2.00 19796 105 448 18589 2.35 19037 106 430 18573 2.26 19003 107 383 17900 2.09 18283 108 385 17896 2.11 18281 109 371 17090 2.12 17461 110 383 17043 2.20 17426 111 377 16332 2.26 16709 112 332 16294 2.00 16626 113 362 15955 2.22 16317 114 360 15606 2.25 15966 115 304 14917 2.00 15221 116 338 14705 2.25 15043 117 317 14230 2.18 14547 118 328 14256 2.25 14584 119 280 13367 2.05 13647 120 288 13351 2.11 13639 121 295 13115 2.20 13410 122 291 13078 2.18 13369 123 276 12258 2.20 12534 124 278 12040 2.26 12318 125 298 11784 2.47 12082 126 265 11523 2.25 11788 127 285 11065 2.51 11350 128 261 10593 2.40 10854 129 254 10980 2.26 11234 130 246 10450 2.30 10696 131 242 10530 2.25 10772 132 215 10143 2.08 10358 133 211 9746 2.12 9957 134 230 9557 2.35 9787 135 233 9147 2.48 9380 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 59955 571422 9.50 631377 2 37422 576296 6.10 613718 3 36867 551454 6.27 588321 4 35493 542519 6.14 578012 5 32958 528719 5.87 561677 6 31000 499503 5.84 530503 7 28037 493339 5.38 521376 8 28225 488874 5.46 517099 9 25701 481076 5.07 506777 10 26402 473636 5.28 500038 11 24068 466964 4.90 491032 12 23637 456634 4.92 480271 13 22963 454120 4.81 477083 14 22965 445624 4.90 468589 15 21311 434947 4.67 456258 16 21067 430237 4.67 451304 17 19857 417435 4.54 437292 18 18838 409996 4.39 428834 19 16863 401146 4.03 418009 20 16324 388985 4.03 405309 21 14746 382869 3.71 397615 22 14832 377384 3.78 392216 23 13810 370292 3.60 384102 24 13607 364502 3.60 378109 25 12552 357146 3.40 369698 26 12476 356581 3.38 369057 27 11206 343778 3.16 354984 28 12048 337610 3.45 349658 29 10895 332058 3.18 342953 30 11449 328425 3.37 339874 31 10377 320123 3.14 330500 32 10704 312785 3.31 323489 33 9519 305486 3.02 315005 34 9851 300389 3.18 310240 35 9501 294381 3.13 303882 36 9644 289025 3.23 298669 37 9026 280255 3.12 289281 38 9347 275861 3.28 285208 39 8610 267710 3.12 276320 40 8411 261534 3.12 269945 41 8338 258047 3.13 266385 42 8266 249557 3.21 257823 43 8059 249285 3.13 257344 44 8391 246018 3.30 254409 45 7308 235163 3.01 242471 46 7702 230530 3.23 238232 47 7354 228684 3.12 236038 48 7232 217437 3.22 224669 49 6989 213627 3.17 220616 50 7329 208745 3.39 216074 51 6484 205989 3.05 212473 52 7087 205664 3.33 212751 53 6306 198431 3.08 204737 54 6485 195915 3.20 202400 55 6417 190218 3.26 196635 56 6493 185278 3.39 191771 57 5908 181687 3.15 187595 58 6144 178524 3.33 184668 59 5827 177547 3.18 183374 60 5756 170435 3.27 176191 61 5577 166355 3.24 171932 62 5461 164427 3.21 169888 63 5356 163417 3.17 168773 64 5409 159819 3.27 165228 65 5168 154178 3.24 159346 66 4973 151805 3.17 156778 67 4848 149417 3.14 154265 68 4854 144036 3.26 148890 69 4576 140205 3.16 144781 70 4595 136626 3.25 141221 71 4332 134505 3.12 138837 72 4480 131734 3.29 136214 73 4231 129805 3.16 134036 74 4411 127123 3.35 131534 75 3929 122459 3.11 126388 76 4147 120820 3.32 124967 77 3994 117623 3.28 121617 78 3898 114946 3.28 118844 79 3762 114239 3.19 118001 80 3789 111658 3.28 115447 81 3484 110688 3.05 114172 82 3675 108599 3.27 112274 83 3573 103137 3.35 106710 84 3331 101015 3.19 104346 85 3346 98609 3.28 101955 86 3290 96737 3.29 100027 87 3141 95256 3.19 98397 88 3155 95376 3.20 98531 89 3016 92538 3.16 95554 90 3024 91085 3.21 94109 91 2856 87287 3.17 90143 92 2954 84551 3.38 87505 93 2618 82923 3.06 85541 94 2793 80458 3.35 83251 95 2617 79332 3.19 81949 96 2717 78774 3.33 81491 97 2513 76383 3.19 78896 98 2476 74448 3.22 76924 99 2411 73193 3.19 75604 100 2423 71230 3.29 73653 101 2277 69549 3.17 71826 102 2272 67761 3.24 70033 103 2365 66416 3.44 68781 104 2209 64740 3.30 66949 105 2118 62819 3.26 64937 106 2120 61106 3.35 63226 107 2127 59855 3.43 61982 108 1924 58712 3.17 60636 109 1924 57068 3.26 58992 110 1927 56269 3.31 58196 111 1763 55078 3.10 56841 112 1867 53983 3.34 55850 113 1765 52598 3.25 54363 114 1695 51204 3.20 52899 115 1680 50280 3.23 51960 116 1685 49437 3.30 51122 117 1519 47861 3.08 49380 118 1639 46139 3.43 47778 119 1496 45284 3.20 46780 120 1491 44531 3.24 46022 121 1473 43054 3.31 44527 122 1513 42524 3.44 44037 123 1374 41341 3.22 42715 124 1384 39861 3.36 41245 125 1330 37844 3.40 39174 126 1267 36564 3.35 37831 127 1394 34779 3.85 36173 128 1303 33876 3.70 35179 129 1264 33301 3.66 34565 130 1162 32473 3.45 33635 131 1238 32007 3.72 33245 132 1115 31489 3.42 32604 133 1125 30850 3.52 31975 134 1169 30168 3.73 31337 135 1122 29809 3.63 30931