EF05-EM06-Larvae_R1_001.fastp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 32201285 lines in total Total number of methylation call strings processed: 64402570 Final Cytosine Methylation Report ================================= Total number of C's analysed: 829446303 Total methylated C's in CpG context: 21156602 Total methylated C's in CHG context: 7429304 Total methylated C's in CHH context: 32336364 Total C to T conversions in CpG context: 89122083 Total C to T conversions in CHG context: 148098746 Total C to T conversions in CHH context: 531303204 C methylated in CpG context: 19.2% C methylated in non-CpG context: 5.5%