CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 157169 555125 22.07 712294 2 158806 565330 21.93 724136 3 156727 570425 21.55 727152 4 152851 550545 21.73 703396 5 158878 565798 21.92 724676 6 163332 576284 22.08 739616 7 161349 568314 22.11 729663 8 162846 573002 22.13 735848 9 164284 579638 22.08 743922 10 165358 574154 22.36 739512 11 164642 565717 22.54 730359 12 163395 572034 22.22 735429 13 162376 562389 22.40 724765 14 161802 564963 22.26 726765 15 162304 570576 22.15 732880 16 163047 571331 22.20 734378 17 162339 571402 22.12 733741 18 162654 571580 22.15 734234 19 163543 568529 22.34 732072 20 164433 569962 22.39 734395 21 163879 582006 21.97 745885 22 162736 566760 22.31 729496 23 164513 572927 22.31 737440 24 163511 573807 22.18 737318 25 162088 561659 22.40 723747 26 164788 566008 22.55 730796 27 163670 567379 22.39 731049 28 163338 561549 22.53 724887 29 165486 565983 22.62 731469 30 163034 562739 22.46 725773 31 161124 557838 22.41 718962 32 161510 556503 22.49 718013 33 161915 560988 22.40 722903 34 161146 553516 22.55 714662 35 161058 555772 22.47 716830 36 158757 553525 22.29 712282 37 155926 546332 22.20 702258 38 156843 541380 22.46 698223 39 156545 542553 22.39 699098 40 154298 537401 22.31 691699 41 155401 535555 22.49 690956 42 154828 537886 22.35 692714 43 151945 531788 22.22 683733 44 151907 529282 22.30 681189 45 150350 528012 22.16 678362 46 147556 516129 22.23 663685 47 147093 514565 22.23 661658 48 145961 511731 22.19 657692 49 145378 509295 22.21 654673 50 144557 504819 22.26 649376 51 142799 504874 22.05 647673 52 143432 495258 22.46 638690 53 139998 494743 22.06 634741 54 139379 490429 22.13 629808 55 136617 481940 22.09 618557 56 135225 474145 22.19 609370 57 133631 473157 22.02 606788 58 131811 461817 22.20 593628 59 130202 458252 22.13 588454 60 128264 454935 21.99 583199 61 126500 448780 21.99 575280 62 126142 442421 22.19 568563 63 123169 437303 21.98 560472 64 122686 431263 22.15 553949 65 120454 428843 21.93 549297 66 119536 425388 21.94 544924 67 117541 416836 22.00 534377 68 116290 413895 21.93 530185 69 114640 411771 21.78 526411 70 111687 401011 21.78 512698 71 110945 395887 21.89 506832 72 109573 391143 21.88 500716 73 108340 387399 21.85 495739 74 106100 381837 21.74 487937 75 105214 377550 21.79 482764 76 103315 368404 21.90 471719 77 101787 363069 21.90 464856 78 99947 358447 21.80 458394 79 96673 347254 21.78 443927 80 95375 342710 21.77 438085 81 93363 339386 21.57 432749 82 91370 330528 21.66 421898 83 89494 326740 21.50 416234 84 88695 321544 21.62 410239 85 86429 315613 21.50 402042 86 85636 312640 21.50 398276 87 84039 307893 21.44 391932 88 82111 299567 21.51 381678 89 80837 294641 21.53 375478 90 79290 289902 21.48 369192 91 77415 284673 21.38 362088 92 75938 278602 21.42 354540 93 74608 276679 21.24 351287 94 74019 270861 21.46 344880 95 71767 265809 21.26 337576 96 71263 262671 21.34 333934 97 69456 256055 21.34 325511 98 68054 252831 21.21 320885 99 67386 247900 21.37 315286 100 65709 242994 21.29 308703 101 63998 239200 21.11 303198 102 62497 236473 20.90 298970 103 60940 229481 20.98 290421 104 60220 227574 20.92 287794 105 59062 221684 21.04 280746 106 57961 216682 21.10 274643 107 56818 213019 21.06 269837 108 55818 208180 21.14 263998 109 54541 203339 21.15 257880 110 54239 201648 21.20 255887 111 52051 196130 20.97 248181 112 51306 192059 21.08 243365 113 49920 188118 20.97 238038 114 48695 183511 20.97 232206 115 47433 179817 20.87 227250 116 46495 177104 20.79 223599 117 45788 174048 20.83 219836 118 44717 169106 20.91 213823 119 43323 165975 20.70 209298 120 43021 163800 20.80 206821 121 42537 160149 20.99 202686 122 41521 156995 20.92 198516 123 40145 153371 20.75 193516 124 39937 150987 20.92 190924 125 39299 147812 21.00 187111 126 37528 142632 20.83 180160 127 36598 137571 21.01 174169 128 35500 138012 20.46 173512 129 35045 134784 20.64 169829 130 34476 132111 20.70 166587 131 34209 130933 20.71 165142 132 33330 129605 20.46 162935 133 32755 127742 20.41 160497 134 32062 123952 20.55 156014 135 30818 119717 20.47 150535 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 60175 993412 5.71 1053587 2 53648 1019753 5.00 1073401 3 50944 1031164 4.71 1082108 4 49587 992627 4.76 1042214 5 49830 1006137 4.72 1055967 6 49829 1004349 4.73 1054178 7 49601 1018811 4.64 1068412 8 49006 1010842 4.62 1059848 9 48043 1003148 4.57 1051191 10 48477 1013098 4.57 1061575 11 47772 1001015 4.55 1048787 12 47567 996875 4.55 1044442 13 47755 1015077 4.49 1062832 14 47371 1010272 4.48 1057643 15 47370 1016728 4.45 1064098 16 47461 1018526 4.45 1065987 17 47174 1008631 4.47 1055805 18 48350 1024375 4.51 1072725 19 47777 1023795 4.46 1071572 20 47274 1018693 4.43 1065967 21 47371 1008922 4.48 1056293 22 48361 1031539 4.48 1079900 23 47946 1012029 4.52 1059975 24 48401 1030423 4.49 1078824 25 47611 1014714 4.48 1062325 26 48254 1022299 4.51 1070553 27 47977 1015800 4.51 1063777 28 47873 1021642 4.48 1069515 29 47084 1005332 4.47 1052416 30 47743 1011067 4.51 1058810 31 47889 1003565 4.55 1051454 32 47059 992909 4.53 1039968 33 47442 990489 4.57 1037931 34 48070 1004015 4.57 1052085 35 47158 986901 4.56 1034059 36 47375 987967 4.58 1035342 37 47385 985178 4.59 1032563 38 47200 983398 4.58 1030598 39 47029 966171 4.64 1013200 40 47537 973987 4.65 1021524 41 46643 961575 4.63 1008218 42 46744 960841 4.64 1007585 43 46776 951852 4.68 998628 44 46832 943571 4.73 990403 45 46688 943903 4.71 990591 46 46743 947864 4.70 994607 47 46243 929892 4.74 976135 48 46265 918241 4.80 964506 49 46450 915246 4.83 961696 50 45486 909715 4.76 955201 51 45637 900304 4.82 945941 52 45964 905360 4.83 951324 53 44938 882721 4.84 927659 54 44575 880447 4.82 925022 55 44840 875637 4.87 920477 56 43363 857778 4.81 901141 57 43367 850399 4.85 893766 58 43102 845209 4.85 888311 59 42935 830383 4.92 873318 60 42736 822898 4.94 865634 61 42507 813627 4.96 856134 62 41522 800543 4.93 842065 63 41410 789783 4.98 831193 64 40886 784259 4.96 825145 65 40077 770458 4.94 810535 66 40653 769181 5.02 809834 67 39788 749206 5.04 788994 68 39126 738355 5.03 777481 69 38866 728372 5.07 767238 70 38925 726120 5.09 765045 71 37789 710041 5.05 747830 72 37370 702591 5.05 739961 73 37241 692763 5.10 730004 74 37021 682304 5.15 719325 75 36694 675450 5.15 712144 76 36382 667927 5.17 704309 77 35184 651898 5.12 687082 78 34993 645875 5.14 680868 79 34667 637275 5.16 671942 80 33973 617187 5.22 651160 81 33305 605727 5.21 639032 82 33267 599942 5.25 633209 83 32192 584878 5.22 617070 84 32238 578114 5.28 610352 85 31709 569586 5.27 601295 86 31039 560810 5.24 591849 87 31144 558614 5.28 589758 88 30154 537983 5.31 568137 89 29347 524364 5.30 553711 90 28709 516060 5.27 544769 91 28365 508164 5.29 536529 92 28088 497978 5.34 526066 93 27412 489000 5.31 516412 94 27212 480574 5.36 507786 95 26570 471360 5.34 497930 96 26327 465767 5.35 492094 97 26149 458544 5.39 484693 98 25482 446424 5.40 471906 99 25085 438521 5.41 463606 100 24640 429537 5.43 454177 101 24104 420132 5.43 444236 102 23748 414261 5.42 438009 103 22998 406685 5.35 429683 104 22848 397619 5.43 420467 105 22642 391333 5.47 413975 106 22073 384702 5.43 406775 107 21727 373861 5.49 395588 108 21919 370160 5.59 392079 109 21196 360198 5.56 381394 110 20548 355490 5.46 376038 111 20408 348123 5.54 368531 112 19938 342538 5.50 362476 113 19574 333425 5.55 352999 114 19129 328016 5.51 347145 115 18948 319390 5.60 338338 116 18229 312702 5.51 330931 117 18244 308090 5.59 326334 118 18254 303241 5.68 321495 119 17520 295167 5.60 312687 120 17226 288764 5.63 305990 121 16743 283497 5.58 300240 122 16720 278718 5.66 295438 123 16192 271120 5.64 287312 124 16051 265239 5.71 281290 125 15593 257551 5.71 273144 126 15550 252358 5.80 267908 127 15158 244215 5.84 259373 128 14825 237836 5.87 252661 129 14675 238915 5.79 253590 130 14620 233029 5.90 247649 131 14315 229567 5.87 243882 132 14136 226575 5.87 240711 133 14370 221490 6.09 235860 134 14972 214537 6.52 229509 135 14623 210567 6.49 225190 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 255059 3071136 7.67 3326195 2 228843 3049828 6.98 3278671 3 218089 3038837 6.70 3256926 4 223657 3031741 6.87 3255398 5 217788 3044310 6.68 3262098 6 214887 2983476 6.72 3198363 7 210420 2993927 6.57 3204347 8 215151 3011807 6.67 3226958 9 206466 2995172 6.45 3201638 10 212435 3022496 6.57 3234931 11 206665 3043294 6.36 3249959 12 206568 3042980 6.36 3249548 13 203393 3094866 6.17 3298259 14 206810 3114081 6.23 3320891 15 201207 3114526 6.07 3315733 16 207176 3122735 6.22 3329911 17 202170 3106482 6.11 3308652 18 203056 3109477 6.13 3312533 19 199575 3116053 6.02 3315628 20 200984 3110809 6.07 3311793 21 196387 3115300 5.93 3311687 22 200584 3132403 6.02 3332987 23 196788 3138078 5.90 3334866 24 198613 3125620 5.97 3324233 25 193788 3124242 5.84 3318030 26 197787 3182576 5.85 3380363 27 192100 3140780 5.76 3332880 28 196433 3141153 5.89 3337586 29 193683 3150846 5.79 3344529 30 196371 3152680 5.86 3349051 31 192698 3149068 5.77 3341766 32 194961 3150019 5.83 3344980 33 189330 3122677 5.72 3312007 34 191914 3125965 5.78 3317879 35 190042 3125127 5.73 3315169 36 190035 3112533 5.75 3302568 37 187089 3090263 5.71 3277352 38 189032 3084228 5.78 3273260 39 184376 3055177 5.69 3239553 40 184621 3035753 5.73 3220374 41 183995 3035999 5.71 3219994 42 182727 3002965 5.74 3185692 43 183213 3012727 5.73 3195940 44 184188 3002151 5.78 3186339 45 177375 2946072 5.68 3123447 46 178146 2931200 5.73 3109346 47 177071 2932249 5.69 3109320 48 174273 2868950 5.73 3043223 49 173616 2842906 5.76 3016522 50 173946 2823193 5.80 2997139 51 170100 2804798 5.72 2974898 52 171456 2799229 5.77 2970685 53 169235 2756045 5.79 2925280 54 167590 2746219 5.75 2913809 55 166212 2712862 5.77 2879074 56 165824 2670787 5.85 2836611 57 162239 2642315 5.78 2804554 58 162138 2628007 5.81 2790145 59 159982 2617359 5.76 2777341 60 157508 2561768 5.79 2719276 61 155154 2526208 5.79 2681362 62 155971 2508413 5.85 2664384 63 153626 2493054 5.80 2646680 64 152150 2453495 5.84 2605645 65 148773 2412301 5.81 2561074 66 146356 2381145 5.79 2527501 67 145839 2355975 5.83 2501814 68 144411 2304185 5.90 2448596 69 140596 2270594 5.83 2411190 70 139683 2239258 5.87 2378941 71 137975 2220097 5.85 2358072 72 136745 2180043 5.90 2316788 73 134896 2158960 5.88 2293856 74 133766 2128668 5.91 2262434 75 130270 2076689 5.90 2206959 76 130154 2050978 5.97 2181132 77 127855 2019778 5.95 2147633 78 125997 1988348 5.96 2114345 79 124342 1962464 5.96 2086806 80 123437 1937469 5.99 2060906 81 121143 1913762 5.95 2034905 82 119606 1881024 5.98 2000630 83 118118 1832791 6.05 1950909 84 115463 1799342 6.03 1914805 85 114079 1771796 6.05 1885875 86 113273 1746043 6.09 1859316 87 110794 1727620 6.03 1838414 88 109725 1706773 6.04 1816498 89 108502 1669882 6.10 1778384 90 106897 1647891 6.09 1754788 91 104647 1606113 6.12 1710760 92 103641 1576573 6.17 1680214 93 100733 1552269 6.09 1653002 94 99595 1518255 6.16 1617850 95 98722 1493736 6.20 1592458 96 96895 1476590 6.16 1573485 97 95476 1441600 6.21 1537076 98 93684 1412696 6.22 1506380 99 91953 1389745 6.21 1481698 100 90514 1361505 6.23 1452019 101 88870 1334406 6.24 1423276 102 87745 1308369 6.28 1396114 103 86061 1282716 6.29 1368777 104 85410 1262325 6.34 1347735 105 83362 1232867 6.33 1316229 106 81180 1208833 6.29 1290013 107 80131 1186004 6.33 1266135 108 78508 1160863 6.33 1239371 109 77628 1138943 6.38 1216571 110 76306 1118326 6.39 1194632 111 74359 1095065 6.36 1169424 112 73868 1074931 6.43 1148799 113 71608 1050285 6.38 1121893 114 70589 1030459 6.41 1101048 115 69890 1012434 6.46 1082324 116 69353 994452 6.52 1063805 117 67401 971636 6.49 1039037 118 66292 951183 6.52 1017475 119 65085 931992 6.53 997077 120 63477 913014 6.50 976491 121 62636 894662 6.54 957298 122 61478 876366 6.56 937844 123 60388 856221 6.59 916609 124 60215 833741 6.74 893956 125 58256 805603 6.74 863859 126 56712 777744 6.80 834456 127 55848 749920 6.93 805768 128 54772 730138 6.98 784910 129 54154 714566 7.04 768720 130 54024 704597 7.12 758621 131 53150 693747 7.12 746897 132 52667 683930 7.15 736597 133 53888 675610 7.39 729498 134 55482 670392 7.64 725874 135 54408 658988 7.63 713396 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 23254 89405 20.64 112659 2 23036 91030 20.20 114066 3 21738 85706 20.23 107444 4 19863 81113 19.67 100976 5 19758 79600 19.89 99358 6 20233 78616 20.47 98849 7 19836 75910 20.72 95746 8 19093 73982 20.51 93075 9 18935 74159 20.34 93094 10 18886 72107 20.76 90993 11 17991 69553 20.55 87544 12 17635 69562 20.22 87197 13 17066 66467 20.43 83533 14 16845 64841 20.62 81686 15 16390 64402 20.29 80792 16 16275 63163 20.49 79438 17 15633 61279 20.33 76912 18 15374 60246 20.33 75620 19 14855 58007 20.39 72862 20 14929 57975 20.48 72904 21 14456 58190 19.90 72646 22 13968 55378 20.14 69346 23 13948 54211 20.46 68159 24 13395 53325 20.08 66720 25 13232 50896 20.63 64128 26 13029 50610 20.47 63639 27 12922 50147 20.49 63069 28 12795 48219 20.97 61014 29 12498 47601 20.80 60099 30 12200 46151 20.91 58351 31 11620 44969 20.53 56589 32 11563 44057 20.79 55620 33 11311 43615 20.59 54926 34 11093 41803 20.97 52896 35 10814 41148 20.81 51962 36 10328 40738 20.22 51066 37 9984 39305 20.26 49289 38 9947 38197 20.66 48144 39 9457 37257 20.24 46714 40 9487 36432 20.66 45919 41 9223 35305 20.71 44528 42 9200 35600 20.54 44800 43 8993 34147 20.85 43140 44 8631 33383 20.54 42014 45 8434 33135 20.29 41569 46 8125 31306 20.61 39431 47 8172 30426 21.17 38598 48 7798 29931 20.67 37729 49 7638 29261 20.70 36899 50 7526 28822 20.71 36348 51 7539 28279 21.05 35818 52 7392 27504 21.18 34896 53 6961 26779 20.63 33740 54 6741 26487 20.29 33228 55 6463 25481 20.23 31944 56 6562 24434 21.17 30996 57 6385 24315 20.80 30700 58 6324 23431 21.25 29755 59 5927 22958 20.52 28885 60 5961 22480 20.96 28441 61 5785 21638 21.10 27423 62 5738 21675 20.93 27413 63 5430 21192 20.40 26622 64 5476 20317 21.23 25793 65 5405 20223 21.09 25628 66 5262 19489 21.26 24751 67 5097 19082 21.08 24179 68 5044 18697 21.25 23741 69 4874 18512 20.84 23386 70 4751 17686 21.17 22437 71 4639 17265 21.18 21904 72 4529 16893 21.14 21422 73 4469 16742 21.07 21211 74 4435 16191 21.50 20626 75 4185 15964 20.77 20149 76 4021 15409 20.69 19430 77 4007 14921 21.17 18928 78 4015 14922 21.20 18937 79 3852 14014 21.56 17866 80 3570 13415 21.02 16985 81 3536 13431 20.84 16967 82 3413 12931 20.88 16344 83 3437 12578 21.46 16015 84 3375 12186 21.69 15561 85 3115 11795 20.89 14910 86 3170 11872 21.07 15042 87 3037 11774 20.51 14811 88 3010 11147 21.26 14157 89 2964 10905 21.37 13869 90 2881 10760 21.12 13641 91 2838 10240 21.70 13078 92 2753 9974 21.63 12727 93 2592 9925 20.71 12517 94 2665 9717 21.52 12382 95 2526 9518 20.97 12044 96 2420 9223 20.79 11643 97 2344 8883 20.88 11227 98 2392 8875 21.23 11267 99 2297 8574 21.13 10871 100 2257 8421 21.14 10678 101 2183 8084 21.26 10267 102 2020 8099 19.96 10119 103 1972 7777 20.23 9749 104 1972 7661 20.47 9633 105 1952 7346 20.99 9298 106 1932 7361 20.79 9293 107 1892 7103 21.03 8995 108 1810 6752 21.14 8562 109 1872 6671 21.91 8543 110 1767 6674 20.93 8441 111 1621 6467 20.04 8088 112 1656 6159 21.19 7815 113 1597 5978 21.08 7575 114 1535 5818 20.88 7353 115 1493 5660 20.87 7153 116 1429 5547 20.48 6976 117 1491 5432 21.54 6923 118 1370 5245 20.71 6615 119 1355 5132 20.89 6487 120 1356 5117 20.95 6473 121 1330 5072 20.77 6402 122 1297 4696 21.64 5993 123 1318 4629 22.16 5947 124 1360 4722 22.36 6082 125 1253 4409 22.13 5662 126 1213 4115 22.77 5328 127 1183 4073 22.51 5256 128 1060 4126 20.44 5186 129 1022 3912 20.71 4934 130 1104 3933 21.92 5037 131 1081 3873 21.82 4954 132 1048 3997 20.77 5045 133 1000 3656 21.48 4656 134 929 3476 21.09 4405 135 871 3425 20.27 4296 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14055 154837 8.32 168892 2 10457 158168 6.20 168625 3 9577 159361 5.67 168938 4 8565 142291 5.68 150856 5 8622 141828 5.73 150450 6 7990 136004 5.55 143994 7 7639 134014 5.39 141653 8 7412 130866 5.36 138278 9 6986 125986 5.25 132972 10 7045 127276 5.24 134321 11 6653 123499 5.11 130152 12 6884 120809 5.39 127693 13 6614 122032 5.14 128646 14 6341 116855 5.15 123196 15 6106 115514 5.02 121620 16 5794 111919 4.92 117713 17 5839 108449 5.11 114288 18 5596 108717 4.90 114313 19 5714 106584 5.09 112298 20 5277 103680 4.84 108957 21 4960 100592 4.70 105552 22 5041 102181 4.70 107222 23 4789 96797 4.71 101586 24 4880 99198 4.69 104078 25 4498 92776 4.62 97274 26 4676 92957 4.79 97633 27 4229 90106 4.48 94335 28 4172 88896 4.48 93068 29 4064 84408 4.59 88472 30 4014 84335 4.54 88349 31 3927 82239 4.56 86166 32 3867 78747 4.68 82614 33 3837 78616 4.65 82453 34 3692 77675 4.54 81367 35 3584 74761 4.57 78345 36 3564 73570 4.62 77134 37 3556 71633 4.73 75189 38 3333 70377 4.52 73710 39 3286 67148 4.67 70434 40 3343 67024 4.75 70367 41 3188 64251 4.73 67439 42 3084 63754 4.61 66838 43 3001 61844 4.63 64845 44 2917 60330 4.61 63247 45 2980 59251 4.79 62231 46 2863 58315 4.68 61178 47 2754 56963 4.61 59717 48 2795 55324 4.81 58119 49 2599 53131 4.66 55730 50 2612 52674 4.72 55286 51 2509 51394 4.65 53903 52 2513 51585 4.65 54098 53 2371 48408 4.67 50779 54 2335 47912 4.65 50247 55 2335 47181 4.72 49516 56 2401 45778 4.98 48179 57 2267 44961 4.80 47228 58 2196 44298 4.72 46494 59 2130 42525 4.77 44655 60 2032 41680 4.65 43712 61 1955 40478 4.61 42433 62 1855 39454 4.49 41309 63 1939 38648 4.78 40587 64 1892 37948 4.75 39840 65 1866 36653 4.84 38519 66 1840 36783 4.76 38623 67 1789 34664 4.91 36453 68 1733 34433 4.79 36166 69 1622 33040 4.68 34662 70 1687 32944 4.87 34631 71 1634 31459 4.94 33093 72 1546 31582 4.67 33128 73 1586 30642 4.92 32228 74 1524 29893 4.85 31417 75 1425 29579 4.60 31004 76 1441 28870 4.75 30311 77 1391 28014 4.73 29405 78 1375 28017 4.68 29392 79 1349 27537 4.67 28886 80 1285 25573 4.78 26858 81 1241 24693 4.79 25934 82 1291 24345 5.04 25636 83 1164 23285 4.76 24449 84 1212 23176 4.97 24388 85 1192 23015 4.92 24207 86 1158 22254 4.95 23412 87 1125 22628 4.74 23753 88 1064 20906 4.84 21970 89 1058 20252 4.96 21310 90 1001 19554 4.87 20555 91 1009 19190 5.00 20199 92 952 18742 4.83 19694 93 922 18109 4.84 19031 94 896 17917 4.76 18813 95 909 17375 4.97 18284 96 853 17052 4.76 17905 97 868 17009 4.86 17877 98 854 16381 4.96 17235 99 776 15710 4.71 16486 100 787 15503 4.83 16290 101 774 15324 4.81 16098 102 730 14828 4.69 15558 103 720 14422 4.75 15142 104 710 13965 4.84 14675 105 717 13535 5.03 14252 106 732 13118 5.29 13850 107 680 12869 5.02 13549 108 662 12932 4.87 13594 109 597 12270 4.64 12867 110 629 12268 4.88 12897 111 610 11806 4.91 12416 112 575 11922 4.60 12497 113 586 11219 4.96 11805 114 583 11271 4.92 11854 115 550 10596 4.93 11146 116 510 10444 4.66 10954 117 534 10333 4.91 10867 118 552 10124 5.17 10676 119 460 9581 4.58 10041 120 481 9383 4.88 9864 121 471 9350 4.80 9821 122 507 8933 5.37 9440 123 446 8797 4.83 9243 124 432 8495 4.84 8927 125 438 8203 5.07 8641 126 422 8124 4.94 8546 127 437 7615 5.43 8052 128 375 7285 4.90 7660 129 365 7556 4.61 7921 130 392 7319 5.08 7711 131 357 7208 4.72 7565 132 357 6939 4.89 7296 133 360 6840 5.00 7200 134 363 6482 5.30 6845 135 373 6388 5.52 6761 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 66156 535453 11.00 601609 2 51545 530159 8.86 581704 3 48208 508512 8.66 556720 4 47488 497343 8.72 544831 5 44381 482012 8.43 526393 6 42215 455619 8.48 497834 7 39833 446279 8.19 486112 8 40497 439162 8.44 479659 9 37591 428273 8.07 465864 10 37844 422958 8.21 460802 11 35641 416668 7.88 452309 12 34846 407133 7.88 441979 13 33702 405856 7.67 439558 14 33832 396625 7.86 430457 15 31651 389368 7.52 421019 16 31211 382225 7.55 413436 17 29513 370356 7.38 399869 18 28066 363008 7.18 391074 19 26438 354409 6.94 380847 20 25501 345886 6.87 371387 21 23424 338735 6.47 362159 22 24080 332431 6.75 356511 23 22731 326981 6.50 349712 24 22264 320524 6.49 342788 25 20888 312817 6.26 333705 26 21100 312784 6.32 333884 27 19353 300197 6.06 319550 28 20127 294216 6.40 314343 29 19045 290296 6.16 309341 30 19208 284649 6.32 303857 31 18188 278487 6.13 296675 32 18058 272412 6.22 290470 33 16670 264540 5.93 281210 34 16971 259575 6.14 276546 35 16482 255533 6.06 272015 36 16641 249497 6.25 266138 37 15875 241366 6.17 257241 38 15670 237574 6.19 253244 39 14670 229902 6.00 244572 40 14673 223828 6.15 238501 41 14639 220261 6.23 234900 42 14194 213832 6.22 228026 43 14044 212960 6.19 227004 44 14178 208510 6.37 222688 45 12999 199248 6.12 212247 46 12896 194120 6.23 207016 47 12450 193584 6.04 206034 48 12438 184153 6.33 196591 49 11891 179487 6.21 191378 50 12444 175042 6.64 187486 51 11287 172524 6.14 183811 52 11589 171257 6.34 182846 53 11026 166150 6.22 177176 54 10911 164097 6.23 175008 55 10642 157768 6.32 168410 56 10768 154141 6.53 164909 57 10044 151183 6.23 161227 58 9942 148221 6.29 158163 59 9638 147263 6.14 156901 60 9354 141460 6.20 150814 61 9278 136568 6.36 145846 62 9136 135362 6.32 144498 63 8971 133531 6.30 142502 64 8794 130551 6.31 139345 65 8477 126160 6.30 134637 66 8199 124261 6.19 132460 67 8116 121902 6.24 130018 68 8130 116858 6.50 124988 69 7507 113998 6.18 121505 70 7684 111141 6.47 118825 71 7255 109205 6.23 116460 72 7318 106768 6.41 114086 73 6900 104896 6.17 111796 74 7080 102653 6.45 109733 75 6619 98384 6.30 105003 76 6773 96922 6.53 103695 77 6381 94460 6.33 100841 78 6292 92224 6.39 98516 79 6224 90525 6.43 96749 80 5948 89210 6.25 95158 81 5821 87933 6.21 93754 82 5920 85836 6.45 91756 83 5801 82462 6.57 88263 84 5462 80552 6.35 86014 85 5423 78470 6.46 83893 86 5493 77008 6.66 82501 87 4966 75675 6.16 80641 88 5094 74988 6.36 80082 89 4971 72319 6.43 77290 90 4878 71305 6.40 76183 91 4642 68069 6.38 72711 92 4674 67094 6.51 71768 93 4243 65751 6.06 69994 94 4439 63366 6.55 67805 95 4199 62699 6.28 66898 96 4224 61861 6.39 66085 97 4029 59013 6.39 63042 98 4033 57513 6.55 61546 99 3735 56452 6.21 60187 100 3854 55046 6.54 58900 101 3723 53299 6.53 57022 102 3569 52420 6.37 55989 103 3394 50774 6.27 54168 104 3539 49728 6.64 53267 105 3303 48330 6.40 51633 106 3212 47056 6.39 50268 107 3086 45942 6.29 49028 108 2916 44606 6.14 47522 109 3086 43478 6.63 46564 110 3074 42562 6.74 45636 111 2888 41813 6.46 44701 112 2832 40784 6.49 43616 113 2645 39596 6.26 42241 114 2667 38825 6.43 41492 115 2676 37752 6.62 40428 116 2718 37120 6.82 39838 117 2437 36144 6.32 38581 118 2491 34855 6.67 37346 119 2255 34377 6.16 36632 120 2196 33034 6.23 35230 121 2189 32502 6.31 34691 122 2224 31931 6.51 34155 123 2060 31080 6.22 33140 124 2180 30034 6.77 32214 125 2093 28741 6.79 30834 126 1884 27363 6.44 29247 127 1975 26307 6.98 28282 128 1854 25394 6.80 27248 129 1892 24555 7.15 26447 130 1769 23957 6.88 25726 131 1683 23522 6.68 25205 132 1694 23148 6.82 24842 133 1655 22972 6.72 24627 134 1734 22539 7.14 24273 135 1551 21912 6.61 23463