EF03-EM03-Zygote_R1_001.fastp-trim.REPAIRED_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 15217655 lines in total
Total number of methylation call strings processed: 30435310

Final Cytosine Methylation Report
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Total number of C's analysed:	183990061

Total methylated C's in CpG context:	4697212
Total methylated C's in CHG context:	1262740
Total methylated C's in CHH context:	7746934

Total C to T conversions in CpG context:	17530083
Total C to T conversions in CHG context:	32243239
Total C to T conversions in CHH context:	120509853

C methylated in CpG context:	21.1%
C methylated in non-CpG context:	5.6%