EF01-EM01-Zygote_R1_001.fastp-trim_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 20360525 lines in total
Total number of methylation call strings processed: 40721050

Final Cytosine Methylation Report
=================================
Total number of C's analysed:	319786747

Total methylated C's in CpG context:	10142734
Total methylated C's in CHG context:	2954698
Total methylated C's in CHH context:	14800019

Total C to T conversions in CpG context:	31826605
Total C to T conversions in CHG context:	60089322
Total C to T conversions in CHH context:	199973369

C methylated in CpG context:	24.2%
C methylated in non-CpG context:	6.4%