CF08-CM05-Larvae_R1_001.fastp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 253543 lines in total Total number of methylation call strings processed: 507086 Final Cytosine Methylation Report ================================= Total number of C's analysed: 6244193 Total methylated C's in CpG context: 107817 Total methylated C's in CHG context: 18180 Total methylated C's in CHH context: 232596 Total C to T conversions in CpG context: 621553 Total C to T conversions in CHG context: 1030644 Total C to T conversions in CHH context: 4233403 C methylated in CpG context: 14.8% C methylated in non-CpG context: 4.5%