CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 103046 370619 21.76 473665 2 102383 378600 21.29 480983 3 100702 379331 20.98 480033 4 102013 378476 21.23 480489 5 106751 396353 21.22 503104 6 111952 399104 21.91 511056 7 111706 392331 22.16 504037 8 110457 399405 21.66 509862 9 108269 394744 21.52 503013 10 108555 388124 21.86 496679 11 107662 381369 22.02 489031 12 105559 379832 21.75 485391 13 105628 378807 21.80 484435 14 106112 380933 21.79 487045 15 106527 384702 21.69 491229 16 107200 387927 21.65 495127 17 107427 385285 21.80 492712 18 106949 384804 21.75 491753 19 107871 381713 22.03 489584 20 108202 383705 22.00 491907 21 107944 384388 21.93 492332 22 107569 381083 22.01 488652 23 106736 380593 21.90 487329 24 106032 381399 21.75 487431 25 105984 376090 21.99 482074 26 106209 374951 22.07 481160 27 105228 376359 21.85 481587 28 105762 375364 21.98 481126 29 106647 376841 22.06 483488 30 104719 373344 21.90 478063 31 103587 371324 21.81 474911 32 103698 368112 21.98 471810 33 103578 368180 21.96 471758 34 101979 363858 21.89 465837 35 102402 363987 21.96 466389 36 100734 359625 21.88 460359 37 98820 355680 21.74 454500 38 99331 353924 21.92 453255 39 98595 350995 21.93 449590 40 96974 348518 21.77 445492 41 96658 344549 21.91 441207 42 96010 344415 21.80 440425 43 95243 342324 21.77 437567 44 93725 338767 21.67 432492 45 92356 334509 21.64 426865 46 91974 326834 21.96 418808 47 89893 325572 21.64 415465 48 89691 323153 21.73 412844 49 89121 320011 21.78 409132 50 87510 315528 21.71 403038 51 86616 313924 21.62 400540 52 86429 310838 21.76 397267 53 84381 305795 21.63 390176 54 82736 301042 21.56 383778 55 81600 295925 21.61 377525 56 80962 292328 21.69 373290 57 79755 288152 21.68 367907 58 77726 281807 21.62 359533 59 76817 277446 21.68 354263 60 76081 274441 21.71 350522 61 74116 269738 21.55 343854 62 72893 264076 21.63 336969 63 71205 258898 21.57 330103 64 69910 255152 21.51 325062 65 68620 251583 21.43 320203 66 68253 246421 21.69 314674 67 66247 243068 21.42 309315 68 65406 237803 21.57 303209 69 64111 234678 21.46 298789 70 62881 230453 21.44 293334 71 61941 226700 21.46 288641 72 60479 222288 21.39 282767 73 59365 219180 21.31 278545 74 58015 214568 21.28 272583 75 56875 211027 21.23 267902 76 55593 206096 21.24 261689 77 54685 201577 21.34 256262 78 53825 198154 21.36 251979 79 52251 191798 21.41 244049 80 50878 188136 21.29 239014 81 49700 185779 21.11 235479 82 48665 181173 21.17 229838 83 48357 177684 21.39 226041 84 46579 173878 21.13 220457 85 45819 169684 21.26 215503 86 44491 166683 21.07 211174 87 43981 162895 21.26 206876 88 42542 160017 21.00 202559 89 41845 155712 21.18 197557 90 40693 152664 21.05 193357 91 39847 149285 21.07 189132 92 38641 145533 20.98 184174 93 37886 142722 20.98 180608 94 36580 139673 20.75 176253 95 36027 136722 20.86 172749 96 35399 133950 20.90 169349 97 34229 130314 20.80 164543 98 33724 128013 20.85 161737 99 32733 124942 20.76 157675 100 31989 121766 20.81 153755 101 31407 119229 20.85 150636 102 30776 117176 20.80 147952 103 29733 114218 20.65 143951 104 28787 111008 20.59 139795 105 28537 109227 20.71 137764 106 27790 106095 20.76 133885 107 26912 103961 20.56 130873 108 26118 101806 20.42 127924 109 26030 99535 20.73 125565 110 25483 97653 20.70 123136 111 24557 95300 20.49 119857 112 23760 92307 20.47 116067 113 22991 90275 20.30 113266 114 22626 87825 20.49 110451 115 21889 86234 20.24 108123 116 21432 84020 20.32 105452 117 20570 81646 20.12 102216 118 19946 79150 20.13 99096 119 19667 77618 20.22 97285 120 19276 75935 20.25 95211 121 18966 74113 20.38 93079 122 18423 72016 20.37 90439 123 18062 70542 20.39 88604 124 17468 69111 20.18 86579 125 16974 66486 20.34 83460 126 16260 64620 20.10 80880 127 15941 62754 20.26 78695 128 15432 61612 20.03 77044 129 15305 60099 20.30 75404 130 15013 59083 20.26 74096 131 14756 58530 20.13 73286 132 14667 57666 20.28 72333 133 14391 56948 20.17 71339 134 13525 54498 19.88 68023 135 12840 52237 19.73 65077 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 29638 667294 4.25 696932 2 22456 699997 3.11 722453 3 20846 708531 2.86 729377 4 19982 689869 2.81 709851 5 19998 700196 2.78 720194 6 19154 703515 2.65 722669 7 18715 712682 2.56 731397 8 18503 706608 2.55 725111 9 18025 686255 2.56 704280 10 18124 693337 2.55 711461 11 17451 675720 2.52 693171 12 17945 679664 2.57 697609 13 18387 689454 2.60 707841 14 17570 696609 2.46 714179 15 18333 700640 2.55 718973 16 18433 705561 2.55 723994 17 18429 696447 2.58 714876 18 18472 710760 2.53 729232 19 18210 697343 2.54 715553 20 17985 693236 2.53 711221 21 18296 693993 2.57 712289 22 18760 707881 2.58 726641 23 18330 694705 2.57 713035 24 18838 697456 2.63 716294 25 18365 689597 2.59 707962 26 18856 694910 2.64 713766 27 18783 689052 2.65 707835 28 19087 691611 2.69 710698 29 18726 680739 2.68 699465 30 19391 690420 2.73 709811 31 19147 680774 2.74 699921 32 19183 674820 2.76 694003 33 19485 668953 2.83 688438 34 19501 673888 2.81 693389 35 19092 662037 2.80 681129 36 19488 661064 2.86 680552 37 19252 654027 2.86 673279 38 19742 655537 2.92 675279 39 19260 641729 2.91 660989 40 19928 644684 3.00 664612 41 19655 634315 3.01 653970 42 19744 637199 3.01 656943 43 19606 623500 3.05 643106 44 19812 619384 3.10 639196 45 19925 612220 3.15 632145 46 20144 614117 3.18 634261 47 19434 596236 3.16 615670 48 19811 595136 3.22 614947 49 19819 586459 3.27 606278 50 19802 582255 3.29 602057 51 19685 574076 3.32 593761 52 19806 570299 3.36 590105 53 19291 557611 3.34 576902 54 19334 553165 3.38 572499 55 19236 543121 3.42 562357 56 18958 531946 3.44 550904 57 18722 526309 3.44 545031 58 18755 520125 3.48 538880 59 18524 509075 3.51 527599 60 18785 502880 3.60 521665 61 18238 492777 3.57 511015 62 18045 485176 3.59 503221 63 17751 477415 3.58 495166 64 17690 470439 3.62 488129 65 17422 457820 3.67 475242 66 17500 451488 3.73 468988 67 16950 443153 3.68 460103 68 16836 434375 3.73 451211 69 16634 425417 3.76 442051 70 16618 421314 3.79 437932 71 16268 410014 3.82 426282 72 16073 402749 3.84 418822 73 15820 394638 3.85 410458 74 15625 387365 3.88 402990 75 15446 381320 3.89 396766 76 15076 372679 3.89 387755 77 14812 365037 3.90 379849 78 14956 359589 3.99 374545 79 14820 354104 4.02 368924 80 14136 340736 3.98 354872 81 13990 332263 4.04 346253 82 13888 327391 4.07 341279 83 13526 317628 4.08 331154 84 13448 312581 4.12 326029 85 13189 305916 4.13 319105 86 12971 301491 4.12 314462 87 12864 294721 4.18 307585 88 12363 285057 4.16 297420 89 11959 277339 4.13 289298 90 12038 271863 4.24 283901 91 11797 265220 4.26 277017 92 11542 258303 4.28 269845 93 11439 252730 4.33 264169 94 11280 248374 4.34 259654 95 10926 241239 4.33 252165 96 10690 236853 4.32 247543 97 10407 231999 4.29 242406 98 10144 226102 4.29 236246 99 9866 220870 4.28 230736 100 9690 214421 4.32 224111 101 9760 210174 4.44 219934 102 9458 205749 4.39 215207 103 9241 200198 4.41 209439 104 9110 195700 4.45 204810 105 8859 191774 4.42 200633 106 8720 187024 4.45 195744 107 8510 181124 4.49 189634 108 8295 178430 4.44 186725 109 8135 173247 4.49 181382 110 8070 169146 4.55 177216 111 7650 165263 4.42 172913 112 7599 162390 4.47 169989 113 7508 156986 4.56 164494 114 7448 153070 4.64 160518 115 7177 148818 4.60 155995 116 6798 144955 4.48 151753 117 6710 141760 4.52 148470 118 6638 139278 4.55 145916 119 6593 134431 4.68 141024 120 6398 131034 4.66 137432 121 6242 128745 4.62 134987 122 6204 126026 4.69 132230 123 6097 121500 4.78 127597 124 5858 118356 4.72 124214 125 5655 114497 4.71 120152 126 5603 112091 4.76 117694 127 5426 106962 4.83 112388 128 5514 104200 5.03 109714 129 5337 103424 4.91 108761 130 5337 101885 4.98 107222 131 5483 98849 5.26 104332 132 5376 97902 5.21 103278 133 5283 95605 5.24 100888 134 5525 91771 5.68 97296 135 5472 89880 5.74 95352 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 196229 2412523 7.52 2608752 2 180166 2407176 6.96 2587342 3 170062 2396151 6.63 2566213 4 185709 2391717 7.21 2577426 5 174669 2418854 6.73 2593523 6 181918 2390043 7.07 2571961 7 168953 2406782 6.56 2575735 8 182459 2415791 7.02 2598250 9 168156 2406910 6.53 2575066 10 180569 2423561 6.93 2604130 11 168137 2447934 6.43 2616071 12 177418 2460480 6.73 2637898 13 165201 2503600 6.19 2668801 14 177332 2501424 6.62 2678756 15 167246 2511038 6.24 2678284 16 176353 2493170 6.61 2669523 17 165008 2478007 6.24 2643015 18 171356 2469501 6.49 2640857 19 160184 2472966 6.08 2633150 20 168210 2460877 6.40 2629087 21 155296 2470446 5.91 2625742 22 162640 2478116 6.16 2640756 23 152475 2470575 5.81 2623050 24 158638 2442786 6.10 2601424 25 148173 2438397 5.73 2586570 26 155290 2451663 5.96 2606953 27 144276 2440002 5.58 2584278 28 152028 2427652 5.89 2579680 29 144446 2433148 5.60 2577594 30 149104 2416902 5.81 2566006 31 140882 2413056 5.52 2553938 32 146924 2397501 5.77 2544425 33 136658 2376284 5.44 2512942 34 140457 2370324 5.59 2510781 35 133920 2364238 5.36 2498158 36 137419 2345499 5.53 2482918 37 129810 2323634 5.29 2453444 38 132621 2309268 5.43 2441889 39 126544 2291419 5.23 2417963 40 128795 2268670 5.37 2397465 41 123119 2257776 5.17 2380895 42 124024 2227599 5.27 2351623 43 120005 2218341 5.13 2338346 44 121455 2196165 5.24 2317620 45 114333 2151981 5.04 2266314 46 115417 2121801 5.16 2237218 47 112268 2114322 5.04 2226590 48 110925 2066586 5.09 2177511 49 106981 2042387 4.98 2149368 50 107589 2017626 5.06 2125215 51 103963 1999112 4.94 2103075 52 103200 1982663 4.95 2085863 53 98726 1943243 4.83 2041969 54 98350 1922966 4.87 2021316 55 94789 1892194 4.77 1986983 56 94140 1857909 4.82 1952049 57 90428 1835156 4.70 1925584 58 89612 1810891 4.72 1900503 59 87417 1792061 4.65 1879478 60 85920 1748815 4.68 1834735 61 82854 1715129 4.61 1797983 62 82393 1690765 4.65 1773158 63 80067 1677210 4.56 1757277 64 79111 1641747 4.60 1720858 65 76238 1604085 4.54 1680323 66 74438 1578294 4.50 1652732 67 72624 1557810 4.45 1630434 68 72051 1516349 4.54 1588400 69 69233 1485213 4.45 1554446 70 68418 1454439 4.49 1522857 71 66891 1431986 4.46 1498877 72 65747 1402428 4.48 1468175 73 64133 1381517 4.44 1445650 74 63812 1351901 4.51 1415713 75 61105 1317859 4.43 1378964 76 60876 1291545 4.50 1352421 77 58769 1268035 4.43 1326804 78 57790 1241228 4.45 1299018 79 56527 1218190 4.43 1274717 80 55967 1194516 4.48 1250483 81 54567 1171977 4.45 1226544 82 53378 1148021 4.44 1201399 83 51722 1117298 4.42 1169020 84 50521 1091385 4.42 1141906 85 49788 1072450 4.44 1122238 86 49098 1049751 4.47 1098849 87 47838 1031954 4.43 1079792 88 47511 1011310 4.49 1058821 89 45810 985638 4.44 1031448 90 45064 964358 4.46 1009422 91 43851 937264 4.47 981115 92 43038 917745 4.48 960783 93 41765 896049 4.45 937814 94 41246 871576 4.52 912822 95 40233 855807 4.49 896040 96 39930 841983 4.53 881913 97 38270 817660 4.47 855930 98 37929 799554 4.53 837483 99 36862 781555 4.50 818417 100 36447 760910 4.57 797357 101 35105 741336 4.52 776441 102 34844 724230 4.59 759074 103 34052 709224 4.58 743276 104 33040 694023 4.54 727063 105 32445 676465 4.58 708910 106 31843 661327 4.59 693170 107 30843 647034 4.55 677877 108 30665 627772 4.66 658437 109 29411 612003 4.59 641414 110 28737 598634 4.58 627371 111 28187 583245 4.61 611432 112 27572 569183 4.62 596755 113 26712 556407 4.58 583119 114 26104 541120 4.60 567224 115 25547 529291 4.60 554838 116 25092 518133 4.62 543225 117 24706 504019 4.67 528725 118 24246 490742 4.71 514988 119 23756 478654 4.73 502410 120 22914 467514 4.67 490428 121 22479 454911 4.71 477390 122 22094 442811 4.75 464905 123 21724 431950 4.79 453674 124 21058 417318 4.80 438376 125 20578 403386 4.85 423964 126 19954 387598 4.90 407552 127 19444 371502 4.97 390946 128 19240 361465 5.05 380705 129 18929 353487 5.08 372416 130 18815 345447 5.17 364262 131 18722 339195 5.23 357917 132 18825 333819 5.34 352644 133 18668 328318 5.38 346986 134 19752 322783 5.77 342535 135 19479 315022 5.82 334501 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 9602 37504 20.38 47106 2 8514 38541 18.09 47055 3 7938 35213 18.40 43151 4 7758 33711 18.71 41469 5 7487 33868 18.10 41355 6 7850 32941 19.24 40791 7 7474 30802 19.53 38276 8 7005 30169 18.84 37174 9 7000 29431 19.21 36431 10 7119 28551 19.96 35670 11 6738 27265 19.82 34003 12 6495 26545 19.66 33040 13 6478 26169 19.84 32647 14 6549 25121 20.68 31670 15 6177 24868 19.90 31045 16 5934 24093 19.76 30027 17 5699 23318 19.64 29017 18 5499 22194 19.86 27693 19 5260 22214 19.15 27474 20 5301 21364 19.88 26665 21 5039 21023 19.33 26062 22 4917 20377 19.44 25294 23 4683 19576 19.30 24259 24 4536 19156 19.15 23692 25 4459 18320 19.58 22779 26 4338 17880 19.52 22218 27 4159 17485 19.22 21644 28 4165 16825 19.84 20990 29 4135 16257 20.28 20392 30 3849 15855 19.53 19704 31 3739 15372 19.56 19111 32 3556 14894 19.27 18450 33 3460 14331 19.45 17791 34 3454 13721 20.11 17175 35 3470 13438 20.52 16908 36 3203 13326 19.38 16529 37 3041 12593 19.45 15634 38 3004 12014 20.00 15018 39 2916 11909 19.67 14825 40 2883 11265 20.38 14148 41 2730 11119 19.71 13849 42 2828 10833 20.70 13661 43 2702 10739 20.10 13441 44 2574 10404 19.83 12978 45 2413 9913 19.58 12326 46 2361 9554 19.82 11915 47 2224 9329 19.25 11553 48 2249 9060 19.89 11309 49 2309 8886 20.63 11195 50 2050 8379 19.66 10429 51 2134 8293 20.47 10427 52 2075 8084 20.43 10159 53 1976 7893 20.02 9869 54 1798 7563 19.21 9361 55 1764 7129 19.84 8893 56 1783 7019 20.26 8802 57 1793 7007 20.38 8800 58 1663 6633 20.05 8296 59 1613 6220 20.59 7833 60 1606 6336 20.22 7942 61 1472 6101 19.44 7573 62 1507 5777 20.69 7284 63 1372 5546 19.83 6918 64 1304 5482 19.22 6786 65 1315 5204 20.17 6519 66 1270 4995 20.27 6265 67 1253 4978 20.11 6231 68 1218 4776 20.32 5994 69 1148 4689 19.67 5837 70 1139 4554 20.01 5693 71 1102 4266 20.53 5368 72 1048 4101 20.35 5149 73 1085 4148 20.73 5233 74 1028 3964 20.59 4992 75 1000 3969 20.12 4969 76 956 3719 20.45 4675 77 906 3564 20.27 4470 78 888 3581 19.87 4469 79 813 3385 19.37 4198 80 792 3197 19.85 3989 81 785 3226 19.57 4011 82 768 2992 20.43 3760 83 738 2926 20.14 3664 84 730 2807 20.64 3537 85 662 2880 18.69 3542 86 688 2589 20.99 3277 87 674 2491 21.30 3165 88 627 2446 20.40 3073 89 569 2484 18.64 3053 90 578 2348 19.75 2926 91 527 2265 18.88 2792 92 541 2029 21.05 2570 93 504 2114 19.25 2618 94 502 2020 19.90 2522 95 478 2056 18.86 2534 96 489 1922 20.28 2411 97 442 1806 19.66 2248 98 382 1803 17.48 2185 99 431 1778 19.51 2209 100 422 1741 19.51 2163 101 417 1638 20.29 2055 102 391 1634 19.31 2025 103 349 1586 18.04 1935 104 382 1483 20.48 1865 105 383 1456 20.83 1839 106 339 1385 19.66 1724 107 315 1301 19.49 1616 108 319 1369 18.90 1688 109 340 1304 20.68 1644 110 340 1323 20.44 1663 111 290 1169 19.88 1459 112 294 1226 19.34 1520 113 255 1118 18.57 1373 114 265 1105 19.34 1370 115 226 1046 17.77 1272 116 227 1037 17.96 1264 117 222 987 18.36 1209 118 233 957 19.58 1190 119 210 959 17.96 1169 120 221 919 19.39 1140 121 234 877 21.06 1111 122 219 862 20.26 1081 123 214 798 21.15 1012 124 250 846 22.81 1096 125 178 768 18.82 946 126 180 685 20.81 865 127 155 741 17.30 896 128 164 684 19.34 848 129 160 688 18.87 848 130 150 632 19.18 782 131 173 658 20.82 831 132 184 718 20.40 902 133 181 623 22.51 804 134 136 579 19.02 715 135 130 555 18.98 685 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 6892 62238 9.97 69130 2 3911 66823 5.53 70734 3 3205 67002 4.57 70207 4 2957 57205 4.92 60162 5 2922 55824 4.97 58746 6 2247 53665 4.02 55912 7 2183 53426 3.93 55609 8 2087 51630 3.89 53717 9 1981 48474 3.93 50455 10 2018 48594 3.99 50612 11 2041 46540 4.20 48581 12 2385 45685 4.96 48070 13 2606 45431 5.42 48037 14 2262 44237 4.86 46499 15 2118 43434 4.65 45552 16 2054 41882 4.67 43936 17 2044 40645 4.79 42689 18 1853 40410 4.38 42263 19 1653 38714 4.09 40367 20 1610 37456 4.12 39066 21 1346 36277 3.58 37623 22 1283 36656 3.38 37939 23 1131 34202 3.20 35333 24 1072 34284 3.03 35356 25 952 32732 2.83 33684 26 965 31717 2.95 32682 27 934 30402 2.98 31336 28 858 30509 2.74 31367 29 859 28480 2.93 29339 30 883 28413 3.01 29296 31 833 27469 2.94 28302 32 761 26575 2.78 27336 33 766 25616 2.90 26382 34 814 25680 3.07 26494 35 697 24526 2.76 25223 36 703 24167 2.83 24870 37 680 22897 2.88 23577 38 656 22690 2.81 23346 39 626 21351 2.85 21977 40 643 21227 2.94 21870 41 578 20276 2.77 20854 42 596 20156 2.87 20752 43 617 19298 3.10 19915 44 599 18791 3.09 19390 45 551 18191 2.94 18742 46 524 17854 2.85 18378 47 532 16881 3.06 17413 48 521 16458 3.07 16979 49 482 15705 2.98 16187 50 467 15583 2.91 16050 51 490 14992 3.16 15482 52 465 14963 3.01 15428 53 431 14109 2.96 14540 54 478 13888 3.33 14366 55 415 13146 3.06 13561 56 438 12750 3.32 13188 57 414 12199 3.28 12613 58 373 11990 3.02 12363 59 411 11679 3.40 12090 60 352 11192 3.05 11544 61 350 10916 3.11 11266 62 355 10472 3.28 10827 63 319 10195 3.03 10514 64 308 9950 3.00 10258 65 305 9558 3.09 9863 66 326 9445 3.34 9771 67 328 9061 3.49 9389 68 287 8490 3.27 8777 69 253 8252 2.97 8505 70 295 8239 3.46 8534 71 304 7821 3.74 8125 72 243 7528 3.13 7771 73 251 7412 3.28 7663 74 219 7296 2.91 7515 75 260 7286 3.45 7546 76 214 6665 3.11 6879 77 235 6463 3.51 6698 78 210 6380 3.19 6590 79 230 6354 3.49 6584 80 185 5856 3.06 6041 81 169 5598 2.93 5767 82 184 5491 3.24 5675 83 192 5100 3.63 5292 84 177 4928 3.47 5105 85 165 5008 3.19 5173 86 164 4872 3.26 5036 87 134 4947 2.64 5081 88 165 4447 3.58 4612 89 150 4286 3.38 4436 90 149 4171 3.45 4320 91 132 4063 3.15 4195 92 111 3885 2.78 3996 93 121 3681 3.18 3802 94 136 3485 3.76 3621 95 130 3514 3.57 3644 96 108 3382 3.09 3490 97 116 3273 3.42 3389 98 89 3101 2.79 3190 99 93 3075 2.94 3168 100 98 2940 3.23 3038 101 87 2938 2.88 3025 102 94 2775 3.28 2869 103 95 2686 3.42 2781 104 87 2447 3.43 2534 105 91 2553 3.44 2644 106 69 2491 2.70 2560 107 84 2258 3.59 2342 108 68 2255 2.93 2323 109 81 2124 3.67 2205 110 79 2122 3.59 2201 111 84 1970 4.09 2054 112 79 1998 3.80 2077 113 74 1968 3.62 2042 114 53 1869 2.76 1922 115 59 1766 3.23 1825 116 65 1672 3.74 1737 117 61 1665 3.53 1726 118 46 1606 2.78 1652 119 41 1527 2.61 1568 120 52 1532 3.28 1584 121 44 1469 2.91 1513 122 54 1425 3.65 1479 123 50 1345 3.58 1395 124 37 1255 2.86 1292 125 43 1217 3.41 1260 126 35 1213 2.80 1248 127 39 1206 3.13 1245 128 39 1157 3.26 1196 129 46 1043 4.22 1089 130 38 1149 3.20 1187 131 41 1027 3.84 1068 132 37 978 3.65 1015 133 31 971 3.09 1002 134 26 935 2.71 961 135 40 951 4.04 991 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 44978 259772 14.76 304750 2 35601 262473 11.94 298074 3 34035 249921 11.99 283956 4 35883 242023 12.91 277906 5 33496 234892 12.48 268388 6 32733 219889 12.96 252622 7 30316 217727 12.22 248043 8 31789 212154 13.03 243943 9 28557 209185 12.01 237742 10 30605 204178 13.04 234783 11 27993 201815 12.18 229808 12 29038 195384 12.94 224422 13 27566 194557 12.41 222123 14 28840 186551 13.39 215391 15 26540 183556 12.63 210096 16 26405 175371 13.09 201776 17 23261 168993 12.10 192254 18 22222 162856 12.01 185078 19 18622 158451 10.52 177073 20 18655 151220 10.98 169875 21 15196 147263 9.35 162459 22 15472 141491 9.86 156963 23 13124 138800 8.64 151924 24 13554 132966 9.25 146520 25 11712 130097 8.26 141809 26 12410 127440 8.87 139850 27 10647 123285 7.95 133932 28 11425 119870 8.70 131295 29 10189 117145 8.00 127334 30 10604 113566 8.54 124170 31 9442 110431 7.88 119873 32 9991 107547 8.50 117538 33 8743 103586 7.78 112329 34 9139 100657 8.32 109796 35 8222 98341 7.72 106563 36 9081 94275 8.79 103356 37 7604 91295 7.69 98899 38 8179 88937 8.42 97116 39 7240 86687 7.71 93927 40 7645 82724 8.46 90369 41 6954 82206 7.80 89160 42 7142 78538 8.34 85680 43 6579 77263 7.85 83842 44 6993 74015 8.63 81008 45 6044 71686 7.78 77730 46 5981 68316 8.05 74297 47 5662 67875 7.70 73537 48 5666 63703 8.17 69369 49 5197 62214 7.71 67411 50 5438 60068 8.30 65506 51 4917 58653 7.73 63570 52 4970 56923 8.03 61893 53 4532 54824 7.64 59356 54 4591 53999 7.84 58590 55 4162 51600 7.46 55762 56 4329 49311 8.07 53640 57 3868 48279 7.42 52147 58 4038 47117 7.89 51155 59 3640 46346 7.28 49986 60 3687 44198 7.70 47885 61 3275 42738 7.12 46013 62 3431 41240 7.68 44671 63 3079 40629 7.04 43708 64 3101 39461 7.29 42562 65 2916 37533 7.21 40449 66 2834 36475 7.21 39309 67 2620 35596 6.86 38216 68 2679 34108 7.28 36787 69 2410 33147 6.78 35557 70 2394 31965 6.97 34359 71 2342 30691 7.09 33033 72 2143 29891 6.69 32034 73 2046 29444 6.50 31490 74 2107 28410 6.90 30517 75 1987 27188 6.81 29175 76 1962 26254 6.95 28216 77 1791 25318 6.61 27109 78 1820 24513 6.91 26333 79 1642 24060 6.39 25702 80 1613 23446 6.44 25059 81 1444 22794 5.96 24238 82 1461 22158 6.19 23619 83 1479 20967 6.59 22446 84 1316 20168 6.13 21484 85 1290 19635 6.16 20925 86 1322 19306 6.41 20628 87 1186 18759 5.95 19945 88 1227 18261 6.30 19488 89 1068 17609 5.72 18677 90 1100 17162 6.02 18262 91 1051 16009 6.16 17060 92 1008 15618 6.06 16626 93 905 15219 5.61 16124 94 949 14507 6.14 15456 95 952 14082 6.33 15034 96 858 13882 5.82 14740 97 790 13287 5.61 14077 98 816 12668 6.05 13484 99 780 12477 5.88 13257 100 755 11915 5.96 12670 101 695 11512 5.69 12207 102 644 11169 5.45 11813 103 651 10934 5.62 11585 104 656 10498 5.88 11154 105 603 10219 5.57 10822 106 617 9917 5.86 10534 107 531 9694 5.19 10225 108 546 9262 5.57 9808 109 492 8858 5.26 9350 110 531 8652 5.78 9183 111 451 8265 5.17 8716 112 451 7893 5.41 8344 113 451 7632 5.58 8083 114 442 7551 5.53 7993 115 396 7389 5.09 7785 116 406 7048 5.45 7454 117 382 6909 5.24 7291 118 368 6562 5.31 6930 119 367 6334 5.48 6701 120 307 6119 4.78 6426 121 305 6079 4.78 6384 122 337 5749 5.54 6086 123 314 5621 5.29 5935 124 323 5290 5.75 5613 125 323 4973 6.10 5296 126 286 4842 5.58 5128 127 276 4596 5.67 4872 128 287 4309 6.24 4596 129 258 4250 5.72 4508 130 276 4103 6.30 4379 131 255 4040 5.94 4295 132 269 3922 6.42 4191 133 254 3814 6.24 4068 134 243 3555 6.40 3798 135 191 3582 5.06 3773