CF03-CM05-Larvae_R1_001.fastp-trim_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.24.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 28976517 lines in total
Total number of methylation call strings processed: 57953034

Final Cytosine Methylation Report
=================================
Total number of C's analysed:	568296050

Total methylated C's in CpG context:	16364378
Total methylated C's in CHG context:	3697537
Total methylated C's in CHH context:	14879686

Total C to T conversions in CpG context:	68518147
Total C to T conversions in CHG context:	117038992
Total C to T conversions in CHH context:	347797310

C methylated in CpG context:	19.3%
C methylated in non-CpG context:	3.8%