CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 111415 522531 17.57 633946 2 125475 540333 18.85 665808 3 112676 526389 17.63 639065 4 109550 502474 17.90 612024 5 112664 509152 18.12 621816 6 113672 522483 17.87 636155 7 113471 518565 17.95 632036 8 114656 513873 18.24 628529 9 114817 523634 17.98 638451 10 116823 527428 18.13 644251 11 118120 518918 18.54 637038 12 116999 529299 18.10 646298 13 115479 524829 18.03 640308 14 116443 517428 18.37 633871 15 115636 523549 18.09 639185 16 115240 528504 17.90 643744 17 115016 518005 18.17 633021 18 114065 522106 17.93 636171 19 115251 519012 18.17 634263 20 115763 524150 18.09 639913 21 115117 548958 17.33 664075 22 114078 517729 18.06 631807 23 115077 526975 17.92 642052 24 115491 525608 18.01 641099 25 112947 511263 18.09 624210 26 114855 516637 18.19 631492 27 114497 520192 18.04 634689 28 113953 509163 18.29 623116 29 115812 516727 18.31 632539 30 113001 513059 18.05 626060 31 112397 507369 18.14 619766 32 112957 504501 18.29 617458 33 113209 509649 18.18 622858 34 113444 504587 18.36 618031 35 112430 510810 18.04 623240 36 110662 505052 17.97 615714 37 108391 499246 17.84 607637 38 108122 488708 18.12 596830 39 107106 496222 17.75 603328 40 107577 491613 17.95 599190 41 107898 489927 18.05 597825 42 107850 500413 17.73 608263 43 105474 483019 17.92 588493 44 105800 484128 17.93 589928 45 103485 485072 17.58 588557 46 102134 473057 17.76 575191 47 101452 463731 17.95 565183 48 101133 465205 17.86 566338 49 101103 465785 17.83 566888 50 100741 462852 17.87 563593 51 99833 463414 17.72 563247 52 101470 456244 18.19 557714 53 97194 456002 17.57 553196 54 97561 457479 17.58 555040 55 95613 446486 17.64 542099 56 95254 435671 17.94 530925 57 93493 436039 17.66 529532 58 93096 428995 17.83 522091 59 92793 425130 17.92 517923 60 91118 426535 17.60 517653 61 90057 418917 17.69 508974 62 88974 414960 17.66 503934 63 87801 412216 17.56 500017 64 86151 405650 17.52 491801 65 87240 406063 17.68 493303 66 85966 405732 17.48 491698 67 85210 399065 17.60 484275 68 84483 395796 17.59 480279 69 84053 400150 17.36 484203 70 81268 387749 17.33 469017 71 80927 384394 17.39 465321 72 80028 377225 17.50 457253 73 80491 378529 17.54 459020 74 78746 375840 17.32 454586 75 77896 372650 17.29 450546 76 76982 363639 17.47 440621 77 75454 361690 17.26 437144 78 74679 362343 17.09 437022 79 72920 346247 17.40 419167 80 71782 346412 17.16 418194 81 70786 344275 17.05 415061 82 69322 334059 17.19 403381 83 67885 332610 16.95 400495 84 67275 328916 16.98 396191 85 66957 323321 17.16 390278 86 67163 325848 17.09 393011 87 65110 326320 16.63 391430 88 63919 311835 17.01 375754 89 64057 308567 17.19 372624 90 63079 307549 17.02 370628 91 61720 303495 16.90 365215 92 59760 300040 16.61 359800 93 60244 304663 16.51 364907 94 59804 297038 16.76 356842 95 58800 289853 16.86 348653 96 57749 289721 16.62 347470 97 56929 281953 16.80 338882 98 57416 281203 16.96 338619 99 56752 276152 17.05 332904 100 55956 271499 17.09 327455 101 54529 271164 16.74 325693 102 52587 269408 16.33 321995 103 51424 263156 16.35 314580 104 50824 263935 16.15 314759 105 51106 256412 16.62 307518 106 49792 251516 16.53 301308 107 50310 250208 16.74 300518 108 48956 244816 16.66 293772 109 49108 241362 16.91 290470 110 50478 242549 17.23 293027 111 47222 238222 16.54 285444 112 46674 231339 16.79 278013 113 45643 229204 16.61 274847 114 44894 224471 16.67 269365 115 44176 222229 16.58 266405 116 43492 220403 16.48 263895 117 42616 218236 16.34 260852 118 41666 211293 16.47 252959 119 41085 209338 16.41 250423 120 41335 207182 16.63 248517 121 41691 206074 16.83 247765 122 41500 204688 16.86 246188 123 39990 201357 16.57 241347 124 40307 198442 16.88 238749 125 39709 195964 16.85 235673 126 38295 189396 16.82 227691 127 36782 183498 16.70 220280 128 35640 185355 16.13 220995 129 35788 183074 16.35 218862 130 35519 180566 16.44 216085 131 35277 181243 16.29 216520 132 35875 182155 16.45 218030 133 34668 177293 16.36 211961 134 33575 173921 16.18 207496 135 32416 166722 16.28 199138 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 15730 898929 1.72 914659 2 13849 907916 1.50 921765 3 13088 954465 1.35 967553 4 11405 880978 1.28 892383 5 11283 895665 1.24 906948 6 11114 882910 1.24 894024 7 10459 892792 1.16 903251 8 10624 893378 1.18 904002 9 10348 898301 1.14 908649 10 10472 908419 1.14 918891 11 10292 907910 1.12 918202 12 10234 910293 1.11 920527 13 10344 910473 1.12 920817 14 10324 903784 1.13 914108 15 10531 908838 1.15 919369 16 10202 903721 1.12 913923 17 10147 893757 1.12 903904 18 10257 906030 1.12 916287 19 10158 918466 1.09 928624 20 10086 918198 1.09 928284 21 9868 891488 1.09 901356 22 10099 916379 1.09 926478 23 9898 895639 1.09 905537 24 10218 920178 1.10 930396 25 9919 893290 1.10 903209 26 10064 915119 1.09 925183 27 10043 906519 1.10 916562 28 10095 908804 1.10 918899 29 9796 883660 1.10 893456 30 10046 882846 1.13 892892 31 9689 876581 1.09 886270 32 9719 864966 1.11 874685 33 10132 871061 1.15 881193 34 10152 886967 1.13 897119 35 9992 872458 1.13 882450 36 10313 870577 1.17 880890 37 9977 864373 1.14 874350 38 10176 860251 1.17 870427 39 10168 839001 1.20 849169 40 10286 857238 1.19 867524 41 10180 848203 1.19 858383 42 10435 841009 1.23 851444 43 10326 832218 1.23 842544 44 10307 820994 1.24 831301 45 10447 832512 1.24 842959 46 10480 833743 1.24 844223 47 10130 823485 1.22 833615 48 10476 800102 1.29 810578 49 10370 799158 1.28 809528 50 10316 797313 1.28 807629 51 10442 792601 1.30 803043 52 10675 798552 1.32 809227 53 10273 781272 1.30 791545 54 10485 776289 1.33 786774 55 10453 781038 1.32 791491 56 10214 761678 1.32 771892 57 10361 758336 1.35 768697 58 10192 748537 1.34 758729 59 10089 741352 1.34 751441 60 10169 734536 1.37 744705 61 10174 736841 1.36 747015 62 10206 717888 1.40 728094 63 9907 708244 1.38 718151 64 10271 708094 1.43 718365 65 9776 694926 1.39 704702 66 10360 707886 1.44 718246 67 9723 682742 1.40 692465 68 9837 679375 1.43 689212 69 9814 668077 1.45 677891 70 9677 673666 1.42 683343 71 9506 657175 1.43 666681 72 9523 649946 1.44 659469 73 9561 641509 1.47 651070 74 9420 636855 1.46 646275 75 9407 640670 1.45 650077 76 9432 629781 1.48 639213 77 9242 617261 1.48 626503 78 9351 621076 1.48 630427 79 9165 635248 1.42 644413 80 8929 587336 1.50 596265 81 8757 575964 1.50 584721 82 8798 582238 1.49 591036 83 8553 563093 1.50 571646 84 8560 560188 1.51 568748 85 8568 558673 1.51 567241 86 8706 556625 1.54 565331 87 9279 583236 1.57 592515 88 8368 538744 1.53 547112 89 8269 529504 1.54 537773 90 8076 520353 1.53 528429 91 8205 510968 1.58 519173 92 7847 502625 1.54 510472 93 7920 496804 1.57 504724 94 7866 492315 1.57 500181 95 7862 483816 1.60 491678 96 7688 483573 1.56 491261 97 7939 481541 1.62 489480 98 7685 469224 1.61 476909 99 7617 466076 1.61 473693 100 7229 454860 1.56 462089 101 7196 445683 1.59 452879 102 7286 444050 1.61 451336 103 7007 437935 1.57 444942 104 7019 433450 1.59 440469 105 7069 426636 1.63 433705 106 6984 423219 1.62 430203 107 6877 414347 1.63 421224 108 7213 416524 1.70 423737 109 6583 403262 1.61 409845 110 6650 402437 1.63 409087 111 6588 392743 1.65 399331 112 6590 391320 1.66 397910 113 6455 383179 1.66 389634 114 6485 381107 1.67 387592 115 6469 371601 1.71 378070 116 6178 367034 1.66 373212 117 6147 366105 1.65 372252 118 6299 367785 1.68 374084 119 6056 359366 1.66 365422 120 6131 351630 1.71 357761 121 5870 347010 1.66 352880 122 5760 346155 1.64 351915 123 5704 341011 1.65 346715 124 5818 333248 1.72 339066 125 5694 321936 1.74 327630 126 5774 319543 1.77 325317 127 5612 312387 1.76 317999 128 5348 303440 1.73 308788 129 5521 308352 1.76 313873 130 5398 303519 1.75 308917 131 5467 305234 1.76 310701 132 5347 296519 1.77 301866 133 5750 291269 1.94 297019 134 6092 282585 2.11 288677 135 5958 282053 2.07 288011 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 78921 2912470 2.64 2991391 2 79943 2886836 2.69 2966779 3 69950 2925248 2.34 2995198 4 75147 2953545 2.48 3028692 5 66780 2963765 2.20 3030545 6 69294 2827793 2.39 2897087 7 63701 2839403 2.19 2903104 8 69710 2842487 2.39 2912197 9 61706 2833077 2.13 2894783 10 67648 2878127 2.30 2945775 11 62145 2881658 2.11 2943803 12 66277 2859158 2.27 2925435 13 63318 2898654 2.14 2961972 14 67928 2913907 2.28 2981835 15 62109 2892870 2.10 2954979 16 65633 2938495 2.18 3004128 17 59942 2883045 2.04 2942987 18 61076 2889504 2.07 2950580 19 57516 2905854 1.94 2963370 20 60138 2884911 2.04 2945049 21 54573 2876544 1.86 2931117 22 58275 2893063 1.97 2951338 23 54119 2877474 1.85 2931593 24 57347 2851373 1.97 2908720 25 52762 2844154 1.82 2896916 26 56350 2954014 1.87 3010364 27 51308 2852362 1.77 2903670 28 56140 2864199 1.92 2920339 29 51340 2867442 1.76 2918782 30 54641 2874387 1.87 2929028 31 50480 2863277 1.73 2913757 32 53664 2876253 1.83 2929917 33 49385 2830901 1.71 2880286 34 52319 2853877 1.80 2906196 35 49672 2850433 1.71 2900105 36 52005 2833316 1.80 2885321 37 48699 2811222 1.70 2859921 38 49890 2799901 1.75 2849791 39 47896 2759399 1.71 2807295 40 48841 2738967 1.75 2787808 41 47932 2747292 1.71 2795224 42 48326 2725932 1.74 2774258 43 47754 2765485 1.70 2813239 44 48971 2764438 1.74 2813409 45 45656 2679987 1.68 2725643 46 46468 2672224 1.71 2718692 47 45713 2704415 1.66 2750128 48 45744 2604136 1.73 2649880 49 44299 2587199 1.68 2631498 50 45851 2569085 1.75 2614936 51 42816 2568118 1.64 2610934 52 45907 2596259 1.74 2642166 53 43295 2526343 1.68 2569638 54 43801 2552232 1.69 2596033 55 42590 2506137 1.67 2548727 56 43539 2465943 1.73 2509482 57 41480 2447047 1.67 2488527 58 42443 2455353 1.70 2497796 59 41612 2477480 1.65 2519092 60 41144 2398840 1.69 2439984 61 40123 2369423 1.67 2409546 62 40498 2368941 1.68 2409439 63 40132 2399879 1.64 2440011 64 39945 2365799 1.66 2405744 65 38497 2306417 1.64 2344914 66 38855 2286053 1.67 2324908 67 38608 2292674 1.66 2331282 68 38564 2211417 1.71 2249981 69 36605 2186871 1.65 2223476 70 37129 2171544 1.68 2208673 71 35616 2164703 1.62 2200319 72 36913 2126117 1.71 2163030 73 35963 2142987 1.65 2178950 74 36830 2121750 1.71 2158580 75 34363 2047978 1.65 2082341 76 35771 2041170 1.72 2076941 77 34234 2019130 1.67 2053364 78 34198 1991956 1.69 2026154 79 33972 1977094 1.69 2011066 80 34081 1968623 1.70 2002704 81 32849 1985373 1.63 2018222 82 33251 1955816 1.67 1989067 83 32540 1887099 1.70 1919639 84 31931 1854891 1.69 1886822 85 32054 1832472 1.72 1864526 86 31783 1825804 1.71 1857587 87 30755 1815353 1.67 1846108 88 31748 1824759 1.71 1856507 89 30443 1789773 1.67 1820216 90 31031 1792540 1.70 1823571 91 29812 1735308 1.69 1765120 92 30233 1710197 1.74 1740430 93 29171 1713102 1.67 1742273 94 29680 1655279 1.76 1684959 95 28740 1644709 1.72 1673449 96 29589 1659185 1.75 1688774 97 28145 1611548 1.72 1639693 98 28470 1580933 1.77 1609403 99 27468 1568755 1.72 1596223 100 28127 1544907 1.79 1573034 101 26832 1521867 1.73 1548699 102 26985 1505134 1.76 1532119 103 26516 1481888 1.76 1508404 104 26474 1467891 1.77 1494365 105 26056 1446540 1.77 1472596 106 25970 1428752 1.79 1454722 107 25889 1414780 1.80 1440669 108 25289 1384155 1.79 1409444 109 24914 1367106 1.79 1392020 110 24953 1349931 1.81 1374884 111 24029 1331383 1.77 1355412 112 24553 1321943 1.82 1346496 113 23761 1291783 1.81 1315544 114 23514 1275102 1.81 1298616 115 23126 1258531 1.80 1281657 116 23527 1249065 1.85 1272592 117 22232 1221721 1.79 1243953 118 22736 1204274 1.85 1227010 119 22237 1186426 1.84 1208663 120 21797 1168328 1.83 1190125 121 21497 1152057 1.83 1173554 122 21680 1140258 1.87 1161938 123 21265 1125105 1.85 1146370 124 21470 1098158 1.92 1119628 125 20733 1061964 1.91 1082697 126 20300 1029140 1.93 1049440 127 20573 994195 2.03 1014768 128 19843 975086 1.99 994929 129 19673 960645 2.01 980318 130 19843 949751 2.05 969594 131 19607 938294 2.05 957901 132 19649 930936 2.07 950585 133 20138 920242 2.14 940380 134 20884 917112 2.23 937996 135 20762 907589 2.24 928351 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 26364 142458 15.62 168822 2 29956 149968 16.65 179924 3 25687 138543 15.64 164230 4 24080 131494 15.48 155574 5 24781 130018 16.01 154799 6 24406 130382 15.77 154788 7 24112 126298 16.03 150410 8 23218 122427 15.94 145645 9 23407 124846 15.79 148253 10 24092 124884 16.17 148976 11 23431 120935 16.23 144366 12 22873 121705 15.82 144578 13 22285 116898 16.01 139183 14 21912 115309 15.97 137221 15 21825 113217 16.16 135042 16 21118 113550 15.68 134668 17 20807 110116 15.89 130923 18 20347 108607 15.78 128954 19 20396 106510 16.07 126906 20 19960 108130 15.58 128090 21 19126 111153 14.68 130279 22 19361 104194 15.67 123555 23 19383 101787 16.00 121170 24 19129 100769 15.95 119898 25 18193 97200 15.77 115393 26 18653 96592 16.19 115245 27 18111 96984 15.74 115095 28 17919 94365 15.96 112284 29 17841 93185 16.07 111026 30 17020 91563 15.67 108583 31 16704 90271 15.61 106975 32 16735 88590 15.89 105325 33 16193 87066 15.68 103259 34 16666 85942 16.24 102608 35 16242 85142 16.02 101384 36 15770 84223 15.77 99993 37 15165 82908 15.46 98073 38 15007 79945 15.80 94952 39 14869 80144 15.65 95013 40 14809 77851 15.98 92660 41 14625 76507 16.05 91132 42 14693 78028 15.85 92721 43 14113 75499 15.75 89612 44 13808 73941 15.74 87749 45 13479 73113 15.57 86592 46 13323 71206 15.76 84529 47 12799 68904 15.67 81703 48 12777 68704 15.68 81481 49 12609 67028 15.83 79637 50 12525 66718 15.81 79243 51 12385 66009 15.80 78394 52 12459 64997 16.09 77456 53 11718 63936 15.49 75654 54 11611 63648 15.43 75259 55 11520 61730 15.73 73250 56 11243 59394 15.92 70637 57 11234 59335 15.92 70569 58 10923 58649 15.70 69572 59 10806 57428 15.84 68234 60 10584 57203 15.61 67787 61 10401 55209 15.85 65610 62 10075 55227 15.43 65302 63 9885 54058 15.46 63943 64 9817 52592 15.73 62409 65 9850 52256 15.86 62106 66 9825 52272 15.82 62097 67 9651 50830 15.96 60481 68 9308 50500 15.56 59808 69 9394 49930 15.84 59324 70 9211 49343 15.73 58554 71 8911 47653 15.75 56564 72 8958 46620 16.12 55578 73 8946 46057 16.26 55003 74 8464 46324 15.45 54788 75 8460 45803 15.59 54263 76 8362 43942 15.99 52304 77 8018 43210 15.65 51228 78 8225 43935 15.77 52160 79 7686 41131 15.74 48817 80 7460 40933 15.42 48393 81 7669 40893 15.79 48562 82 7151 39163 15.44 46314 83 7275 39047 15.71 46322 84 6972 38054 15.48 45026 85 6840 37858 15.30 44698 86 6868 37934 15.33 44802 87 6757 37563 15.25 44320 88 6648 35884 15.63 42532 89 6495 35079 15.62 41574 90 6409 34736 15.58 41145 91 6403 34518 15.65 40921 92 6096 33621 15.35 39717 93 6199 34788 15.12 40987 94 6062 33540 15.31 39602 95 5887 32285 15.42 38172 96 5761 32097 15.22 37858 97 5540 30877 15.21 36417 98 5703 30929 15.57 36632 99 5709 30629 15.71 36338 100 5550 29815 15.69 35365 101 5249 29296 15.19 34545 102 5078 29393 14.73 34471 103 5061 28688 15.00 33749 104 5044 28889 14.86 33933 105 4879 27540 15.05 32419 106 4949 26712 15.63 31661 107 4953 26881 15.56 31834 108 4693 26017 15.28 30710 109 4944 25701 16.13 30645 110 5086 26328 16.19 31414 111 4694 25349 15.62 30043 112 4449 24537 15.35 28986 113 4289 24397 14.95 28686 114 4303 23859 15.28 28162 115 4176 23393 15.15 27569 116 4243 22879 15.64 27122 117 4048 22716 15.12 26764 118 3903 22073 15.03 25976 119 4014 22113 15.36 26127 120 3760 21364 14.97 25124 121 3958 21152 15.76 25110 122 3684 21055 14.89 24739 123 3687 20655 15.15 24342 124 3706 20466 15.33 24172 125 3787 20214 15.78 24001 126 3454 19050 15.35 22504 127 3270 18303 15.16 21573 128 3376 18776 15.24 22152 129 3255 18711 14.82 21966 130 3262 18138 15.24 21400 131 3217 18723 14.66 21940 132 3384 18669 15.34 22053 133 3100 17587 14.99 20687 134 2943 17440 14.44 20383 135 2770 16629 14.28 19399 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 5868 237931 2.41 243799 2 5346 237316 2.20 242662 3 4179 249892 1.64 254071 4 3581 222368 1.58 225949 5 3623 228047 1.56 231670 6 3401 215844 1.55 219245 7 2991 212502 1.39 215493 8 2989 210999 1.40 213988 9 2896 204915 1.39 207811 10 2911 208062 1.38 210973 11 2781 205738 1.33 208519 12 2665 204051 1.29 206716 13 2724 201506 1.33 204230 14 2755 197799 1.37 200554 15 2812 200028 1.39 202840 16 2593 189509 1.35 192102 17 2420 182184 1.31 184604 18 2423 185727 1.29 188150 19 2307 185842 1.23 188149 20 2105 181850 1.14 183955 21 2036 175515 1.15 177551 22 2002 177951 1.11 179953 23 2059 170791 1.19 172850 24 1935 174807 1.09 176742 25 1865 164594 1.12 166459 26 1855 171825 1.07 173680 27 1808 164657 1.09 166465 28 1762 161930 1.08 163692 29 1647 154849 1.05 156496 30 1634 154713 1.05 156347 31 1604 149978 1.06 151582 32 1564 148123 1.04 149687 33 1549 147636 1.04 149185 34 1541 148344 1.03 149885 35 1552 144697 1.06 146249 36 1504 144245 1.03 145749 37 1505 138980 1.07 140485 38 1496 137402 1.08 138898 39 1400 131922 1.05 133322 40 1393 134552 1.02 135945 41 1410 131753 1.06 133163 42 1399 129366 1.07 130765 43 1291 125135 1.02 126426 44 1302 121849 1.06 123151 45 1400 124675 1.11 126075 46 1277 121632 1.04 122909 47 1253 122264 1.01 123517 48 1323 114819 1.14 116142 49 1221 114005 1.06 115226 50 1243 113765 1.08 115008 51 1210 111282 1.08 112492 52 1184 112250 1.04 113434 53 1234 107968 1.13 109202 54 1195 106752 1.11 107947 55 1139 106657 1.06 107796 56 1104 103436 1.06 104540 57 1108 104005 1.05 105113 58 1043 100121 1.03 101164 59 1079 98501 1.08 99580 60 1098 97408 1.11 98506 61 993 96323 1.02 97316 62 987 93490 1.04 94477 63 1012 91089 1.10 92101 64 1063 91097 1.15 92160 65 984 88525 1.10 89509 66 982 89345 1.09 90327 67 995 85363 1.15 86358 68 941 86987 1.07 87928 69 908 83119 1.08 84027 70 912 82808 1.09 83720 71 900 80570 1.10 81470 72 891 79137 1.11 80028 73 880 79247 1.10 80127 74 872 77734 1.11 78606 75 838 77283 1.07 78121 76 838 76205 1.09 77043 77 770 74197 1.03 74967 78 825 75707 1.08 76532 79 856 76274 1.11 77130 80 748 69266 1.07 70014 81 745 67153 1.10 67898 82 726 67754 1.06 68480 83 709 65731 1.07 66440 84 739 65245 1.12 65984 85 725 63801 1.12 64526 86 739 64282 1.14 65021 87 738 67481 1.08 68219 88 664 61757 1.06 62421 89 729 61266 1.18 61995 90 638 58701 1.08 59339 91 634 57769 1.09 58403 92 593 56890 1.03 57483 93 637 56049 1.12 56686 94 587 54913 1.06 55500 95 623 53737 1.15 54360 96 572 52672 1.07 53244 97 603 52956 1.13 53559 98 585 51692 1.12 52277 99 568 51979 1.08 52547 100 511 49573 1.02 50084 101 529 48792 1.07 49321 102 548 48065 1.13 48613 103 508 47972 1.05 48480 104 497 47071 1.04 47568 105 540 45981 1.16 46521 106 511 45763 1.10 46274 107 518 44540 1.15 45058 108 520 44807 1.15 45327 109 482 43254 1.10 43736 110 493 43608 1.12 44101 111 513 41973 1.21 42486 112 470 41117 1.13 41587 113 464 40318 1.14 40782 114 450 40518 1.10 40968 115 397 39038 1.01 39435 116 407 38298 1.05 38705 117 406 38416 1.05 38822 118 416 37861 1.09 38277 119 370 37022 0.99 37392 120 396 36962 1.06 37358 121 367 35806 1.01 36173 122 386 35918 1.06 36304 123 400 34502 1.15 34902 124 320 34012 0.93 34332 125 399 32874 1.20 33273 126 398 32484 1.21 32882 127 353 31481 1.11 31834 128 360 30379 1.17 30739 129 329 30996 1.05 31325 130 358 30875 1.15 31233 131 352 31060 1.12 31412 132 319 29493 1.07 29812 133 325 28738 1.12 29063 134 345 28264 1.21 28609 135 382 27763 1.36 28145 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 31003 835255 3.58 866258 2 29657 818262 3.50 847919 3 26196 818935 3.10 845131 4 25797 812527 3.08 838324 5 23454 798422 2.85 821876 6 22792 744946 2.97 767738 7 20476 735074 2.71 755550 8 21722 727094 2.90 748816 9 19147 719976 2.59 739123 10 19874 719663 2.69 739537 11 18261 710350 2.51 728611 12 19274 693986 2.70 713260 13 19233 694452 2.69 713685 14 20106 685532 2.85 705638 15 19050 677807 2.73 696857 16 17386 681948 2.49 699334 17 15711 657409 2.33 673120 18 14535 650318 2.19 664853 19 13504 641644 2.06 655148 20 12890 629504 2.01 642394 21 11585 620016 1.83 631601 22 11481 616496 1.83 627977 23 10536 605617 1.71 616153 24 10717 595545 1.77 606262 25 9862 584447 1.66 594309 26 10138 597052 1.67 607190 27 9068 573309 1.56 582377 28 10151 569967 1.75 580118 29 8672 561378 1.52 570050 30 9282 557226 1.64 566508 31 8542 547114 1.54 555656 32 8909 540299 1.62 549208 33 8092 528694 1.51 536786 34 8364 527161 1.56 535525 35 8066 519321 1.53 527387 36 8024 513411 1.54 521435 37 7511 500943 1.48 508454 38 7711 493054 1.54 500765 39 7430 482351 1.52 489781 40 7128 471507 1.49 478635 41 7485 468101 1.57 475586 42 7120 459633 1.53 466753 43 7183 465606 1.52 472789 44 7354 462566 1.56 469920 45 6477 442034 1.44 448511 46 6843 433935 1.55 440778 47 6595 436524 1.49 443119 48 6683 415101 1.58 421784 49 6305 410141 1.51 416446 50 6657 405197 1.62 411854 51 5755 402785 1.41 408540 52 6524 405988 1.58 412512 53 5817 390489 1.47 396306 54 6134 391308 1.54 397442 55 5763 381883 1.49 387646 56 5849 374891 1.54 380740 57 5618 368943 1.50 374561 58 5655 368169 1.51 373824 59 5405 370047 1.44 375452 60 5321 353460 1.48 358781 61 5486 345969 1.56 351455 62 5212 346915 1.48 352127 63 5120 350012 1.44 355132 64 5111 344560 1.46 349671 65 4992 334242 1.47 339234 66 4983 329329 1.49 334312 67 4833 328555 1.45 333388 68 4849 314560 1.52 319409 69 4454 310223 1.42 314677 70 4729 305149 1.53 309878 71 4315 302306 1.41 306621 72 4552 297314 1.51 301866 73 4281 296910 1.42 301191 74 4454 293593 1.49 298047 75 3889 282320 1.36 286209 76 4191 280995 1.47 285186 77 4024 277574 1.43 281598 78 4022 271308 1.46 275330 79 3972 270437 1.45 274409 80 3925 267200 1.45 271125 81 3584 268325 1.32 271909 82 3828 264483 1.43 268311 83 3747 251505 1.47 255252 84 3450 247425 1.38 250875 85 3631 244149 1.47 247780 86 3477 242767 1.41 246244 87 3346 240182 1.37 243528 88 3481 240789 1.43 244270 89 3304 234442 1.39 237746 90 3417 234687 1.44 238104 91 3229 225659 1.41 228888 92 3195 220625 1.43 223820 93 3059 220871 1.37 223930 94 3278 212599 1.52 215877 95 2898 211101 1.35 213999 96 3111 212609 1.44 215720 97 2941 205675 1.41 208616 98 2777 201477 1.36 204254 99 2743 199995 1.35 202738 100 2860 196141 1.44 199001 101 2777 193551 1.41 196328 102 2648 190482 1.37 193130 103 2581 186897 1.36 189478 104 2631 184106 1.41 186737 105 2582 180037 1.41 182619 106 2576 177215 1.43 179791 107 2524 175515 1.42 178039 108 2292 172498 1.31 174790 109 2474 169993 1.43 172467 110 2278 166764 1.35 169042 111 2253 163259 1.36 165512 112 2271 162654 1.38 164925 113 2198 158203 1.37 160401 114 2187 156701 1.38 158888 115 2168 154056 1.39 156224 116 2112 153125 1.36 155237 117 1926 149345 1.27 151271 118 2041 147081 1.37 149122 119 2009 144529 1.37 146538 120 1928 142821 1.33 144749 121 1852 140186 1.30 142038 122 1925 138503 1.37 140428 123 1924 136595 1.39 138519 124 1819 132592 1.35 134411 125 1800 126751 1.40 128551 126 1700 123171 1.36 124871 127 1794 118517 1.49 120311 128 1658 116468 1.40 118126 129 1666 114212 1.44 115878 130 1647 112215 1.45 113862 131 1675 110050 1.50 111725 132 1562 108400 1.42 109962 133 1595 108062 1.45 109657 134 1679 106812 1.55 108491 135 1517 105074 1.42 106591