CF01-CM02-Larvae_R1_001.fastp-trim_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.0 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 34616976 lines in total Total number of methylation call strings processed: 69233952 Final Cytosine Methylation Report ================================= Total number of C's analysed: 592353716 Total methylated C's in CpG context: 16358374 Total methylated C's in CHG context: 2435138 Total methylated C's in CHH context: 11319336 Total C to T conversions in CpG context: 73894403 Total C to T conversions in CHG context: 124473330 Total C to T conversions in CHH context: 363873135 C methylated in CpG context: 18.1% C methylated in non-CpG context: 2.7%