Total number of alignments analysed in CF08-CM04-Larvae_R1_001.fastp-trim.REPAIRED_bismark_bt2_pe.bam:	538216
Total number duplicated alignments removed:	212976 (39.57%)
Duplicated alignments were found at:	119006 different position(s)

Total count of deduplicated leftover sequences: 325240 (60.43% of total)