Nextflow workflow report

[crazy_fermi]

Error executing process > 'NFCORE_DENOVOTRANSCRIPT:DENOVOTRANSCRIPT:TRINITY'

Caused by:
  Failed to pull singularity image
    command: singularity pull  --name depot.galaxyproject.org-singularity-trinity-2.15.1--pl5321h146fbdb_3.img.pulling.1728481099385 https://depot.galaxyproject.org/singularity/trinity:2.15.1--pl5321h146fbdb_3 > /dev/null
    status : 143
    hint   : Try and increase singularity.pullTimeout in the config (current is "20m")
    message:
      INFO:    Downloading network image

Run times

09-Oct-2024 05:48:40 - 09-Oct-2024 07:02:05 (duration: 1h 13m 25s)

  7 succeeded  

  0 cached  

  0 ignored  

  0 failed  

Nextflow command

nextflow run nf-core/denovotranscript -c /gscratch/srlab/strigg/bin/uw_hyak_srlab.config --input /gscratch/scrubbed/strigg/analyses/20240925/samplesheet/samplesheet_test.csv --outdir /gscratch/scrubbed/strigg/analyses/20241009_denovo '--extra_fastp_args=--trim_front1 10 --trim_front2 10' --remove_ribo_rna --busco_lineage= mollusca_odb10 -resume -with-report nf_report -with-trace -with-timeline nf_timeline

CPU-Hours

12.7

Launch directory

/mmfs1/gscratch/scrubbed/strigg/analyses/20241009_denovo

Work directory

/mmfs1/gscratch/scrubbed/strigg/analyses/20241009_denovo/work

Project directory

/mmfs1/home/strigg/.nextflow/assets/nf-core/denovotranscript

Script name

main.nf

Script ID

abb318d7708cb7806e6e03509485efb4

Workflow session

2202e3bd-0df8-4b58-91e9-7ba400ebe1b0

Workflow repository

https://github.com/nf-core/denovotranscript, revision master (commit hash 27bb1e7924f01fa1e9cd624aeddc7d11b7a8c5fe)

Workflow profile

standard

Nextflow version

version 24.04.4, build 5917 (01-08-2024 07:05 UTC)