Nextflow workflow report

[jovial_miescher] (resumed run)

Run times

09-Dec-2020 16:17:22 - 11-Dec-2020 08:45:16 (duration: 1d 16h 27m 54s)

  153 succeeded  

  108 cached  

  0 ignored  

  0 failed  

Nextflow command

nextflow run nf-core/methylseq -resume -profile singularity --aligner bismark --fasta /data/putnamlab/REFS/Pverr/Pver_genome_assembly_v1.0.fasta --save_reference --reads '/data/putnamlab/KITT/hputnam/20201206_Becker_WGBS/*_R{1,2}_001.fastq.gz' --clip_r1 10 --clip_r2 10 --three_prime_clip_r1 10 --three_prime_clip_r2 10 --non_directional --cytosine_report --relax_mismatches --unmapped --outdir Becker_WGBS

CPU-Hours

2'704.6 (63.8% cached)

Launch directory

/data/putnamlab/hputnam/Becker_E5/WGBS_Becker_E5

Work directory

/data/putnamlab/hputnam/Becker_E5/WGBS_Becker_E5/work

Project directory

/home/hputnam/.nextflow/assets/nf-core/methylseq

Script name

main.nf

Script ID

d7d6a111ff642984c26a75a9a4b2fafe

Workflow session

4d048103-48b5-45cb-83a4-afe6893587ca

Workflow repository

https://github.com/nf-core/methylseq.git, revision master (commit hash 4f31ed1792e3cc8ce0ea648b6ee8f541f70102f7)

Workflow profile

singularity

Workflow container

nfcore/methylseq:1.5

Container engine

singularity

Nextflow version

version 20.04.1, build 5335 (03-05-2020 19:37 UTC)