FastQCFastQC Report
Mon 7 Oct 2024
85--1E11_R1_001.fastp-trim.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename85--1E11_R1_001.fastp-trim.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20451323
Total Bases2.6 Gbp
Sequences flagged as poor quality0
Sequence length15-130
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAAAATGTAGCATCTTCACTACAGATTTAATTTCATTGAATATTTTTTTA342340.1673925936234052No Hit
TTAAAATGTAGCATCTTCACTACAGATTTAATTTCATTGAATATTTTTTT275950.13493014608394774No Hit
TCAACAATTAATTGACAATTGATTACGCTACATTATCACAGTCAGTGTTA214810.10503476963324085No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)