FastQCFastQC Report
Mon 7 Oct 2024
109--2E2_R2_001.fastp-trim.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename109--2E2_R2_001.fastp-trim.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16825493
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length51-130
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2213291.315438424300554No Hit
ACTGGACGGGAAGTTCGAAAGAGCGAAGAAGAGGCTTTAAACTCGTTTTT758850.45101204463964295No Hit
AACTGGACGGGAAGTTCGAAAGAGCGAAGAAGAGGCTTTAAACTCGTTTT411090.24432567889689769No Hit
GAAGAGCTGATGCTCGCCCTCCCGTCCCAGGAGGATGGCCTGGCTGATGA382160.22713153189627194No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT376400.22370815523800697No Hit
CCCCCGAAGAGCATCACCCCAACCCCAAAGCAACGCCGTTGCCTGGCACC358090.21282585895105718No Hit
CAAGTTGATAACGGACTAGCCTTATTTTAACTTGCTATTTCTAGCTCTAA236290.1404357066981633No Hit
CGGGAAGTTCGAAAGAGCGAAGAAGAGGCTTTAAACTCGTTTTTCAATGC189570.11266831824779219No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)