FastQCFastQC Report
Mon 7 Oct 2024
108--2D2_R2_001.fastp-trim.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename108--2D2_R2_001.fastp-trim.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23236271
Total Bases2.9 Gbp
Sequences flagged as poor quality0
Sequence length51-130
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1468340.6319172297482673No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1438940.6192645971464181No Hit
ACTGGACGGGAAGTTCGAAAGAGCGAAGAAGAGGCTTTAAACTCGTTTTT628440.27045647728932065No Hit
AACTGGACGGGAAGTTCGAAAGAGCGAAGAAGAGGCTTTAAACTCGTTTT349380.15035975436850432No Hit
GAAGAGCTGATGCTCGCCCTCCCGTCCCAGGAGGATGGCCTGGCTGATGA292230.12576458589246098No Hit
CCCCCGAAGAGCATCACCCCAACCCCAAAGCAACGCCGTTGCCTGGCACC280340.12064758583681522No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)