Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000021:4351817-4351909 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_5273.ps
Locus Name: Cluster_5273
GAUUAUCAACCUGGAUAACUGGACUGAUAUUCACCAAGUGAUUAAUAUUUACUCAUUUGCUGAUUAUCAGACCAGUCACUAGGCAUCUAGCUC
.........(((((...(((((.((((((.(((.(((((((.(((...))).))))))).))).)))))).)))))..))))).......... (-30.20)
..................CUGGACUGAUAUUCACCAAGUGAUU.................................................. len:25 al:1
.....................GACUGAUAUUCACCAAGUGAUUA................................................. len:23 al:1
......................ACUGAUAUUCACCAAGUa..................................................... len:18 al:9
......................ACUGAUAcUCACCAAGUGA.................................................... len:19 al:1
......................ACUGAUAUUCACCAAGUGAaU.................................................. len:21 al:1
......................cCUGAUAUUCACCAAGUGAUU.................................................. len:21 al:2
......................ACUuAUAUUCACCAAGUGA.................................................... len:19 al:1
......................ACUGAUAUUCACCAAGUGAUc.................................................. len:21 al:6
......................ACUGAUAUUCACCAAG....................................................... len:16 al:1
......................ACUGAUAUUCACCAAGcG..................................................... len:18 al:1
......................ACUGAUAUUCACCAAGUGAU................................................... len:20 al:2
......................ACUGgUAUUCACCAAGUGA.................................................... len:19 al:1
......................ACUGAUAUUCACCAAGUGg.................................................... len:19 al:2
......................ACUGAUAUUCACCAAGUGAUaA................................................. len:22 al:1
......................ACUGAUAUUCACCAAGUG..................................................... len:18 al:34
......................ACUGAUAUUCACCAAGUGAUUA................................................. len:22 al:10
......................cCUGAUAUUCACCAAGUG..................................................... len:18 al:1
......................ACUGAUAUUCACCAAGUGAcU.................................................. len:21 al:1
......................ACaGAUAUUCACCAAGUGAUU.................................................. len:21 al:1
......................ACUGAUAUUCACCAAGUGA.................................................... len:19 al:16
......................ACUGAUAUUCACCAAGUGAUU.................................................. len:21 al:31
......................ACUGAUAUUCACCAAGUGAUa.................................................. len:21 al:2
......................ACUGAUAUcCACCAAGUG..................................................... len:18 al:2
.........................................UUAAUAUUUACUCAUUUGC................................. len:19 al:1
...................................................CUCAUUUGCUGAUUAUCAGACCAc.................. len:24 al:1
...................................................CaCAUUUGCUGAUUAUCAGACC.................... len:22 al:1
...................................................CUCAUUUGCUGAUUAUCAGACCAa.................. len:24 al:1
...................................................CUCAUUUGCUGAUUAUCAGACa.................... len:22 al:5
...................................................CUCAUUUGCUGAUUAUCAGACC.................... len:22 al:7
...................................................CUCAUUUGCUGAUUAUCAGACCA................... len:23 al:7
...................................................CUCAUUUGCUGAUUAUCAGAC..................... len:21 al:1
...................................................CUCAUUUGCUGAUUAUCAGACCc................... len:23 al:1
...................................................CUCAUUUGCUGAUUAUCAGgCC.................... len:22 al:2
...................................................CUCAUUUGCUGAUUAUCAGACCAu.................. len:24 al:1
...................................................CUCAUUUGCUGAUUAUCAGACCg................... len:23 al:2
....................................................UCAUUUGCUGAUUAUCAGACCAc.................. len:23 al:1