Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000005:11261356-11261449 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_1952.ps
Locus Name: Cluster_1952
AAUUUCUCUGUGUUCUUCUUUCUAUGCCAGGUCCUAACUUGAAAAUUAUUUUCAGGUUAUGAGCGUGGUAUGAAAAGAGAUGCACAUUAAUUGA
........(((((((((.((((.((((((.((.((((((((((((...))))))))))).).)).)))))))))).)))).)))))........ (-31.80)
.AUUUCUCUGUGUUCUUCUUUC........................................................................ len:21 al:3
.AUUUCUCUGUGgUCUUCUUUC........................................................................ len:21 al:4
.AUUUCUCUGUGUUCUUCUUU......................................................................... len:20 al:1
..UUUCUCUGUGUUCUUCUUaC........................................................................ len:20 al:1
..UUUCUCUGUGgUCUUCUUUC........................................................................ len:20 al:6
..UUUCUCUGUGUUCUUCUUUC........................................................................ len:20 al:10
..UUUCUCUGUGUUCUUCUUU......................................................................... len:19 al:2
...UUCUCUGUGUUCUUCUUa......................................................................... len:18 al:1
...UUCUCUGUGUUCUUCUUaC........................................................................ len:19 al:1
...UUCUCUGUGUUCUUCUUUu........................................................................ len:19 al:2
...cUCUCUGUGUUCUUCUUUC........................................................................ len:19 al:3
...UUCUCUGUGUUCUUCUUcC........................................................................ len:19 al:1
...UUCUCUGUGUUCUUCUUc......................................................................... len:18 al:1
...UUCUCUGUGUUCUUCUUU......................................................................... len:18 al:4
...UUCUCUGUGUUCUUCUUUC........................................................................ len:19 al:103
...UUCUCUGUGgUCUUCUUUC........................................................................ len:19 al:23
...UUCUCUGUGUcCUUCUUUC........................................................................ len:19 al:1
...UUCUCUGUGUUCUUuUUUC........................................................................ len:19 al:1
...UUCUCUGUGUUCUUCUUUa........................................................................ len:19 al:3
....UCUCUGUGgUCUUCUUUC........................................................................ len:18 al:9
....UCUCUGUGUUCUUCUUUC........................................................................ len:18 al:14
.....................CUAUGCCAGGUCCUAACUUGA.................................................... len:21 al:1
.....................uUAUGCCAGGUCCUAACUUGA.................................................... len:21 al:2
......................UAUGCCAGGUCuUAACUUGAAA.................................................. len:22 al:1
......................UAUGCCAGGUCCUAACcUGAAA.................................................. len:22 al:9
......................UAUGCCgGGUCCUAACUUGAAAAUU............................................... len:25 al:4
......................UgUGCCAGGUCCUAACUUGAAA.................................................. len:22 al:14
......................UAUGCCAGGUCCUAACUUGAAAAUU............................................... len:25 al:1
......................cAUGCCAGGUCCUAACUUGA.................................................... len:20 al:3
......................UAUGCCAGGUCCUAACUc...................................................... len:18 al:16
......................UAUGCCAGGUCCUAACUUGA.................................................... len:20 al:1573
......................UAUGCCAGGUCCUAACUUGAAA.................................................. len:22 al:3074
......................UgUGCCAGGUCCUAACUUG..................................................... len:19 al:1
......................UAUGCCAGGUCCUgACUUGAA................................................... len:21 al:2
......................UAUGCCAGGUCCUAACU....................................................... len:17 al:3
......................UAUGCCAGGUCCUAcCUUGAA................................................... len:21 al:2
......................UAUGCCAGGUCCUAACUgGA.................................................... len:20 al:1
......................UAUGCCAGGUCCUAACaUGA.................................................... len:20 al:1
......................UAUGCCAGGUCCUAACUUG..................................................... len:19 al:127
......................UAUGCCAGGUCCUAACUcGA.................................................... len:20 al:4
......................UAUGCCAGGUCgUAACUUGAAA.................................................. len:22 al:1
......................UAUGCCAGGcCCUAACUUGAAA.................................................. len:22 al:10
......................UAUGCCAGGUCCUAACUUGAAAu................................................. len:23 al:65
......................UgUGCCAGGUCCUAACUUGAA................................................... len:21 al:3
......................UAUGCCAGGUuCUAACUU...................................................... len:18 al:1
......................UAUGCCAGGUCCUAgCUUG..................................................... len:19 al:2
......................UAUGCCAGGUCCUAACUUGAA................................................... len:21 al:1408
......................UAUGCCAGGUCCUAAuUUG..................................................... len:19 al:1
......................UAcGCCAGGUCCUAACUUGAAA.................................................. len:22 al:11
......................UAUGCCAaGUCCUAACUUGA.................................................... len:20 al:1
......................UAUGCCAGGUCuUAACUUGAA................................................... len:21 al:1
......................aAUGCCAGGUCCUAACUUGAAA.................................................. len:22 al:44
......................UAUaCCAGGUCCUAACUUGA.................................................... len:20 al:3
......................UAUGCCgGGUCCUAACUU...................................................... len:18 al:1
......................UAUGCCAGGUCCcAACUUGAAA.................................................. len:22 al:8
......................UAUGCCAGGUCCUAACUUGAu................................................... len:21 al:31
......................UAUGCCAGGUCCUAAuUUGA.................................................... len:20 al:1
......................UAUcCCAGGUCCUAACUUGAAA.................................................. len:22 al:1
......................UAUGCCAGGUCCUAACUUaAA................................................... len:21 al:1
......................UAcGCCAGGUCCUAACUUGAA................................................... len:21 al:5
......................UAUGCCAGGUCCUAACUUc..................................................... len:19 al:2
......................UcUGCCAGGUCCUAACUUGA.................................................... len:20 al:2
......................UAUGCCAGGUCCUAgCUUGA.................................................... len:20 al:32
......................UAUGCCAGGUCCUAgCUUGAA................................................... len:21 al:38
......................UAUGCCgGGUCCUAACUUGAAAAUUA.............................................. len:26 al:2
......................UAUGCCAGGcCCUAACUUGAA................................................... len:21 al:3
......................UAUGCCAGGUCCUAACUUu..................................................... len:19 al:11
......................UAUGuCAGGUCCUAACUUGAAA.................................................. len:22 al:3
......................UAUGCCAGGUCCUAACUUGg.................................................... len:20 al:29
......................UAUGCCAaGUCCUAACUUGAA................................................... len:21 al:2
......................UAUGCCAGGUCCUAgCUUGAAA.................................................. len:22 al:69
......................UAUGuCAGGUCCUAACUUGA.................................................... len:20 al:3
......................UAUGCCAGGUCCUAACcUG..................................................... len:19 al:1
......................UAUGCuAGGUCCUAACUUGAAA.................................................. len:22 al:6
......................UAUGCCAGaUCCUAACUUGAA................................................... len:21 al:2
......................UAUGCCAGGUCaUAACUUGAAA.................................................. len:22 al:2
......................UAUGCuAGGUCCUAACUUGAA................................................... len:21 al:1
......................UAUGCCAGGUCCUAACUUa..................................................... len:19 al:43
......................UAUGCCAGGUCCUAACUUGAAg.................................................. len:22 al:36
......................aAUGCCAGGUCCUAACUUGAA................................................... len:21 al:19
......................UAUGCCAGGUCCUuACUUGA.................................................... len:20 al:1
......................UAUGCCAGGUCCUAACUUGu.................................................... len:20 al:61
......................UAUGCCAGGUCCUAACUUGAAAc................................................. len:23 al:22
......................UAUGCCAGGUCCUAA......................................................... len:15 al:1
......................UAUaCCAGGUCCUAACUUGAA................................................... len:21 al:3
......................cAUGCCAGGUCCUAACUUGAAA.................................................. len:22 al:7
......................UAUGCCgGGUCCUAACUUGAAA.................................................. len:22 al:65
......................UAUGCCuGGUCCUAACUUGAAA.................................................. len:22 al:4
......................UuUGCCAGGUCCUAACUUGAA................................................... len:21 al:1
......................UAUGCCAGGUCCUAACUa...................................................... len:18 al:19
......................UAcGCCAGGUCCUAACUUG..................................................... len:19 al:2
......................UAUGCCAGGUCCUAACUgG..................................................... len:19 al:7
......................UAUGCCAGGUCCUAACgUG..................................................... len:19 al:1
......................UAUGCCgGGUCCUAACUUGAA................................................... len:21 al:38
......................UAUGCCAGaUCCUAACUUGAAA.................................................. len:22 al:1
......................aAUGCCAGGUCCUAACUUGA.................................................... len:20 al:22
......................aAUGCCAGGUCCUAACUU...................................................... len:18 al:2
......................UAUGCCAGGUCCUAACUUGgA................................................... len:21 al:8
......................UAUGCCAGGUCCUAACUUGcAA.................................................. len:22 al:1
......................UAUGCCAGGUCCUAACcUGAA................................................... len:21 al:3
......................UAUGCCgGGUCCUAACUUGA.................................................... len:20 al:34
......................UAUGCCAGGUCuUAACUUGA.................................................... len:20 al:1
......................UAUGCCAGGUCCUAACc....................................................... len:17 al:1
......................UAUGCCAGGUCCUAACaUGAA................................................... len:21 al:1
......................UAUGCCAGGUCCUAACUUGgAA.................................................. len:22 al:21
......................UAUGCCAGGUCCUAACUcGAAA.................................................. len:22 al:11
......................UAUGCCAGGUCCcAACUUGAA................................................... len:21 al:3
......................UAUGCCAGGUCCUAAuUUGAA................................................... len:21 al:2
......................UAUGCCAGGUCCUAACUUGAAc.................................................. len:22 al:23
......................UAUGaCAGGUCCUAACUUGAAA.................................................. len:22 al:1
......................UAUGCCAGGUCCUAACUgGAA................................................... len:21 al:2
......................UAUGCCAGGUCCUAACUg...................................................... len:18 al:1
......................UAUGCCAGGUCCUAACUUGc.................................................... len:20 al:2
......................UAUGCCAGGUCCUAACUUGAAAAUUAUUUUC......................................... len:31 al:3
......................UgUGCCAGGUCCUAACUUGA.................................................... len:20 al:8
......................UAUGCCAGGUCCUAAuUUGAAA.................................................. len:22 al:3
......................UAUGCCAGGUCCUAACgUGA.................................................... len:20 al:1
......................UAUGCCAGGUCCUgACUUGAAA.................................................. len:22 al:8
......................UAUGCCAGGUCCUAACcUGA.................................................... len:20 al:5
......................UAUGCCAGGUCCUAACUUGAAAA................................................. len:23 al:13
......................UAUGCCAGGUCCUAACaUGAAA.................................................. len:22 al:1
......................UAUGCCAGGUCCUAACUcG..................................................... len:19 al:4
......................UAUGCCAGGUCCUAACUUaA.................................................... len:20 al:11
......................UAaGCCAGGUCCUAACUUGAA................................................... len:21 al:1
......................UAUGCCAGGUCCUAACUaG..................................................... len:19 al:1
......................UAUGCCAGGUCCUAACUUGAAu.................................................. len:22 al:147
......................UAUGCCAGGUCCUAACUUGAc................................................... len:21 al:11
......................UAUGCCAGuUCCUAACUUGAA................................................... len:21 al:1
......................UAUaCCAGGUCCUAACUUGAAA.................................................. len:22 al:3
......................UAUGCCAGGUCCgAACUUGA.................................................... len:20 al:1
......................cAUGCCAGGUCCUAACUUGAA................................................... len:21 al:4
......................UAUGCCAGGUCCUAACUgGAAA.................................................. len:22 al:2
......................UAUGCCAGGUCCUAACUcGAA................................................... len:21 al:3
......................UAaGCCAGGUCCUAACUUGAAA.................................................. len:22 al:3
......................UAUGCCAGGUCCUAACUaGAAA.................................................. len:22 al:2
......................UAUGCCAGGUCCUAACUUGAAAgU................................................ len:24 al:1
......................UAUGCCcGGUCCUAACUUGAAA.................................................. len:22 al:3
......................UAUGCCAGGUCCUAACUUGAgA.................................................. len:22 al:19
......................UAcGCCAGGUCCUAACUUGAAAAUUAUUUUC......................................... len:31 al:1
......................UAUGCCAGGUCCcAACUUGA.................................................... len:20 al:5
......................UAUGCCAGGUCCUAACUUGAAAAU................................................ len:24 al:1
......................UAUGCCAGGUCCUAACUUGAg................................................... len:21 al:20
......................UAUGCCgGGUCCUAACUUG..................................................... len:19 al:1
......................UAUGCCuGGUCCUAACUUGAA................................................... len:21 al:1
......................UAUGCCAGGUCCUAAaUUGAAA.................................................. len:22 al:1
......................UAUGCCAGGUCCUAACgU...................................................... len:18 al:2
......................UAUGCCAGGUCCUAACUUGAAAg................................................. len:23 al:5
......................UAUGCCAGGUCCUAuCUUGAAA.................................................. len:22 al:2
......................aAUGCCAGGUCCUAACUUG..................................................... len:19 al:3
......................UAUGCCAGGUCCUAgCUU...................................................... len:18 al:1
......................UAUGCCAGGUCCUAAaUUGA.................................................... len:20 al:1
......................UAUGCCAGGUCCUAAC........................................................ len:16 al:3
......................UAUGCCAGGUCCUAACUUGuA................................................... len:21 al:2
......................UuUGCCAGGUCCUAACUUGAAA.................................................. len:22 al:4
......................UAUGCCAGGUaCUAACUUGAA................................................... len:21 al:1
......................UAcGCCAGGUCCUAACUUGA.................................................... len:20 al:6
......................UAUGCCAGGUCCUAACUUGAAuA................................................. len:23 al:1
......................UAUGCCAGGUCCUAACUU...................................................... len:18 al:141
......................UAUGCCAGGcCCUAACUU...................................................... len:18 al:1
.......................AUGCCAGGUCCUAACUUGAA................................................... len:20 al:1
........................UGCCAGGUCCUAACUUGA.................................................... len:18 al:2
...........................................AAUUAUUUUCAGGUUAUGAGCGUGGUAUGAA.................... len:31 al:2
............................................AUUAUUUUCAGGUUAUGAGCGUGGUAUGAA.................... len:30 al:1
.............................................UUAUUUUCAGGUUAUGAGCGUGGUA........................ len:25 al:1
.................................................UUUCAGGUUAUGAGCGUGGUAUGAu.................... len:25 al:1
.................................................UUUCAGGUUAUGAGCGUGGUAUGAA.................... len:25 al:1
..................................................UUCAGGUUAUGAGCGUGGUAUGAA.................... len:24 al:2
...................................................UCgGGUUAUGAGCGUGGUAUGA..................... len:22 al:4
...................................................UCAGGUUAUGAGCGUGGUc........................ len:19 al:1
...................................................cCAGGUUAUGAGCGUGGUAUGAA.................... len:23 al:16
...................................................UCAGGUUAUGAGCGUGGUAc....................... len:20 al:4
...................................................UCAGGUUAUGAGCGUGGUAUGAAuA.................. len:25 al:15
...................................................UCAGGUUAUGAGCGUaGUAUG...................... len:21 al:1
...................................................UCAGGUUAUGAaCGUGGUAUGAA.................... len:23 al:4
...................................................UCAaGUUAUGAGCGUGGUAUGAA.................... len:23 al:2
...................................................UCAGGUUAUGAGCGUGGUAUGu..................... len:22 al:11
...................................................UCuGGUUAUGAGCGUGGUAUGAA.................... len:23 al:1
...................................................UCAGGUUAUGAGCGUGGUAUGAAAA.................. len:25 al:2
...................................................UCAGGUUAUGAGCGUGGUAUu...................... len:21 al:1
...................................................UCuGGUUAUGAGCGUGGUAUG...................... len:21 al:1
...................................................UCAGGUUAUGAGCGaGGUAUGAA.................... len:23 al:1
...................................................UCAGGUUAUGAGCGUGGUAUaAA.................... len:23 al:2
...................................................UCAGGUUAUGAGCGUGGUA........................ len:19 al:27
...................................................UCAGGUUAUGAGCGUGGUAUGg..................... len:22 al:18
...................................................UCAGGUUAUGAGCGUGGa......................... len:18 al:2
...................................................UCAGGUUAUGAGCGUGGUAUGAc.................... len:23 al:26
...................................................UCAGGUUAUGAGCGUGGcAUGAA.................... len:23 al:3
...................................................UCAGGUUAUGgGCGUGGUAUG...................... len:21 al:4
...................................................UCgGGUUAUGAGCGUGGUAUG...................... len:21 al:2
...................................................UCAGGcUAUGAGCGUGGUAUGAA.................... len:23 al:5
...................................................UCAGGUUAUGAGCGUGaUAUGAA.................... len:23 al:1
...................................................UCAGGUUAUGAGCGUGGc......................... len:18 al:4
...................................................UCAGGUUAUGAGCGUGGUAUGAAg................... len:24 al:11
...................................................UCAGGUUAUGAGCGUaGUAUGAA.................... len:23 al:3
...................................................UCAGGUUAUGAGCGUGGUAUGgA.................... len:23 al:14
...................................................UCAGGUUAUGAGCGUGaU......................... len:18 al:5
...................................................UCAGGUUAUGAGCaUGGUAUGA..................... len:22 al:1
...................................................UCAGGUUAUGAGCGUGGUAUGuA.................... len:23 al:2
...................................................UCAGGUUAUGAGCGUGGUAUa...................... len:21 al:48
...................................................UCAGGUUAUGAGCaUGGUAUGAA.................... len:23 al:2
...................................................UCAGGUUAUGAGCGUGGUAUGAA.................... len:23 al:1902
...................................................UCAGGUUAUGAGCGUGGUAUG...................... len:21 al:165
...................................................UCAGGUUAUGAGCGUGGUAUuAA.................... len:23 al:1
...................................................UCAGGUUgUGAGCGUGGUAUGA..................... len:22 al:1
...................................................UuAGGUUAUGAGCGUGGUAUGAA.................... len:23 al:5
...................................................cCAGGUUAUGAGCGUGGUAUGA..................... len:22 al:7
...................................................UCAGGUUAUGAGCGUGGUAaG...................... len:21 al:1
...................................................cCAGGUUAUGAGCGUGGUAU....................... len:20 al:1
...................................................UCgGGUUAUGAGCGUGGUAUGAA.................... len:23 al:7
...................................................UCAGGUUAUGAGCGgGGUAUGA..................... len:22 al:1
...................................................UCAGGUUAUGAGCGUGGUgUGA..................... len:22 al:1
...................................................UCAGGUUAUGgGCGUGGUAUGA..................... len:22 al:1
...................................................UCAGGUUAUGAGCGUGGUAgG...................... len:21 al:11
...................................................aCAGGUUAUGAGCGUGGUAUGAA.................... len:23 al:11
...................................................UCAGGUUAcGAGCGUGGUAUGA..................... len:22 al:1
...................................................UCAGGUUAUGAGCGUGGUAcG...................... len:21 al:9
...................................................UCAGGUUAUGAGCGUGGcAUG...................... len:21 al:1
...................................................UCAGGUUAUGgGCGUGGUAUGAA.................... len:23 al:10
...................................................UCAGGUUAUGAGCGUGGUAa....................... len:20 al:1
...................................................UCAGGUUAUGAGCGUGGUAg....................... len:20 al:2
...................................................UCAGGUUAUGAGCGUGGUg........................ len:19 al:1
...................................................UCAGGUUAUGAGuGUGGUAUGAA.................... len:23 al:2
...................................................cCAGGUUAUGAGCGUGGUAUG...................... len:21 al:2
...................................................UCAGGUUAUGAGCGUGGUAcGAA.................... len:23 al:1
...................................................UCAGGUUAUGAGCGcGGUAUGA..................... len:22 al:3
...................................................UCAGGUUAUGAGCGUGGUAU....................... len:20 al:25
...................................................UCAGGUUAUGAGCGUGGUAUGAAu................... len:24 al:345
...................................................UCAGGUUAUGAGCGUGGUAgGA..................... len:22 al:1
...................................................UCAGGUaAUGAGCGUGGUAUGAA.................... len:23 al:1
...................................................UCAGGUcAUGAGCGUGGUAUGAA.................... len:23 al:6
...................................................UCAGGUUAgGAGCGUGGUAU....................... len:20 al:2
...................................................UCAGGUUAUGAGCGUGGUAUGAAcA.................. len:25 al:1
...................................................UCAGGUUAUGAGCGUGGU......................... len:18 al:18
...................................................UCAGGUUAUGAGCGUGGUAUGAuA................... len:24 al:2
...................................................UgAGGUUAUGAGCGUGGUAUGAA.................... len:23 al:3
...................................................UCAGGUUAUGAGCGcGGUAUGAA.................... len:23 al:9
...................................................UCAGGUUAUGAGCGUGGUgUGAA.................... len:23 al:5
...................................................UCAGGUUAUGAGCGUGGUAUaA..................... len:22 al:1
...................................................UaAGGUUAUGAGCGUGGUAUGAA.................... len:23 al:1
...................................................UCAGGUUAUGAGCGUGGUAUcAA.................... len:23 al:1
...................................................UCAGGUUAUGAGCGUGa.......................... len:17 al:1
...................................................UCAGGUUAUGAGCGUGGUgUG...................... len:21 al:2
...................................................aCAGGUUAUGAGCGUGGUAUGA..................... len:22 al:2
...................................................UCAGGUUAUGAGCGUGGUAUGAg.................... len:23 al:40
...................................................UCAGGUUgUGAGCGUGGUAUGAA.................... len:23 al:5
...................................................UCAGGUUAUGAGaGUGGUAUGAA.................... len:23 al:2
...................................................UCAGGUUAUGAGCGUGGUAUcA..................... len:22 al:2
...................................................UCAGGUUAUGAGCGUGGUAUGAAc................... len:24 al:95
...................................................UCAGGUUAUGAGCGUGaUAUG...................... len:21 al:1
...................................................UCAGGUUAUGAGCGUGGUAgGAA.................... len:23 al:2
...................................................UCAGGUUAcGAGCGUGGUAUGAA.................... len:23 al:5
...................................................UCAGcUUAUGAGCGUGGUAUGAA.................... len:23 al:1
...................................................UCAGGUUAUGAGCGUGGUAUGA..................... len:22 al:406
...................................................UCAGGUUAUGuGCGUGGUAUGAA.................... len:23 al:3
...................................................UCAGGUUAUGAGCGUGGUAUGAu.................... len:23 al:82
...................................................UCAGGUUAUGAGCGUGGUuUGA..................... len:22 al:2
...................................................UCAGGUUAUGAGCGUGGUAUGc..................... len:22 al:1
...................................................UCAGGUUAUGAGCGUGGUAUGgAA................... len:24 al:1
...................................................UCAGGUUAUGAGCGUGGUAUGAAA................... len:24 al:40
....................................................CAGGUUAUGAGCGUGGUA........................ len:18 al:1
....................................................CAGGUUAUGAGCGUGGUAUGA..................... len:21 al:1
....................................................CAGGUUAUGAGCGUGGUAUGAAu................... len:23 al:3
....................................................CAGGUUAUGAGCGUGGUAUaA..................... len:21 al:1
....................................................CAGGUUAUGAGCGUGGUAUa...................... len:20 al:3
....................................................CAGGUUAUGAGCGUGGUAUGAAc................... len:23 al:1
....................................................CAGGUUAUGAGCGUGGUAUGAA.................... len:22 al:13
....................................................CAGGUUAUGAGCGUGGUAUG...................... len:20 al:1
....................................................CAGGUUAUGAGCGUGGUAUGAu.................... len:22 al:2
.....................................................AGGUUAUGAGCGUGGUAUGAAu................... len:22 al:1
.....................................................AGGUUAUGAGCGUGGUAUGA..................... len:20 al:1
.....................................................AGGUUAUGAGCGUGGUAUGg..................... len:20 al:1
.....................................................AGGUUAUGAGCGUGGUAUGAA.................... len:21 al:7
......................................................GGUUAUGAGCGUGGUAUGA..................... len:19 al:1
.......................................................GUUAUGAGCGUGGUAUGAA.................... len:19 al:2
.......................................................GUUAUGAGCGUGGUAUGAAu................... len:20 al:1
........................................................UUAUGAGCGUGGUAUGAAA................... len:19 al:1
.........................................................UAUGAGCGUGGUAUGAAu................... len:18 al:1