Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/merged_alignments.bam Location: Pocillopora_meandrina_HIv1___Sc0000002:10845722-10845816 minus Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2.1-Pmea-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_1011.ps Locus Name: Cluster_1011 AUGUUGGGUACAGAGUUUGUUUGCCGUUAACCCAAAACCUUCAUUUACUAAAGGUGUUGGGCUAGCGACUUACAAAAUCUGUAGGAUGCCAUGCC ..((..((((((((.(((((..(.(((((.(((((.(((((.........))))).))))).))))).)..))))).))))).....)))..)). (-30.90) .UGUUGGGUACAGuGUUUG............................................................................ len:18 al:1 .UGUUGGGUACAGuGUUUGU........................................................................... len:19 al:1 ...................cUUGCCGUUAACCCAAAACCUUC..................................................... len:23 al:1 ....................UUGCCGcUAACCCAAAACCUUC..................................................... len:22 al:13 ....................UUGCCGUUuACCCAAAACCUUC..................................................... len:22 al:1 ....................UUGCCGUUAACCCAAAACCUgC..................................................... len:22 al:7 ....................UUGCCuUUAACCCAAAACCUU...................................................... len:21 al:2 ....................UUGCCGUUAACCCAAAACCUU...................................................... len:21 al:66 ....................UUGCCGUUAAuCCAAAACCUUC..................................................... len:22 al:2 ....................UUGCCGUUAACCCAAAACCgU...................................................... len:21 al:2 ....................UUGCCGUUAgCCCAAAACCUUC..................................................... len:22 al:10 ....................UUGCCGUUAACCCAAAACuUUCA.................................................... len:23 al:6 ....................UUGCCGUUAACCCAAAACCUUCc.................................................... len:23 al:17 ....................UUGCCGUUAACCCAAAAuCUUC..................................................... len:22 al:1 ....................UUGCCGUUAACCCAAAACCUUCAgU.................................................. len:25 al:2 ....................UUGCCGUUAcCCCAAAACCUUCA.................................................... len:23 al:1 ....................UUGCCGUUAACCCAAAACuU....................................................... len:20 al:1 ....................cUGCCGUUAACCCAAAACCUUCA.................................................... len:23 al:55 ....................UUGCCGUUAACCCAAAACCc....................................................... len:20 al:27 ....................UUGCCGUUAgCCCAAAACCUU...................................................... len:21 al:1 ....................UUGCCGUUAACCCAAAACCUUCAaU.................................................. len:25 al:2 ....................UUGCCGUUgACCCAAAACCUUCA.................................................... len:23 al:6 ....................UUGCCGUUAACCCAAAACCUUCAUU.................................................. len:25 al:24 ....................UUGCCGUUAACuCAAAACCUUC..................................................... len:22 al:4 ....................UUGCCGUUAACCCAAAcCCUUCA.................................................... len:23 al:4 ....................UUGCCGUUAACCCAAAACCUUCAUUc................................................. len:26 al:1 ....................UUGCCGUUAACCCAAAACCaUC..................................................... len:22 al:6 ....................UUGCCGUUAACCCAAAACaU....................................................... len:20 al:1 ....................UUGCCGUUAACCCAAcACCUUCA.................................................... len:23 al:1 ....................UUGCCGUUAACCCAAAACCg....................................................... len:20 al:9 ....................UUGCCGUUAACCCAAAACCaUCA.................................................... len:23 al:2 ....................UUGCCGUUAACCCAAAACCUUa..................................................... len:22 al:175 ....................UUGCCGUcAACCCAAAACCUUC..................................................... len:22 al:7 ....................UUGCCGUUAACCCAAAACCUUu..................................................... len:22 al:97 ....................UUGCCGUUAACCCAAAuCCUUC..................................................... len:22 al:2 ....................UUGCCGUUAACCCcAAACCUUC..................................................... len:22 al:1 ....................UUGCCGUUuACCCAAAACCUUCA.................................................... len:23 al:1 ....................UUGCCGUUAACCCAAgACCUUC..................................................... len:22 al:7 ....................UUGCCGUUAACCCAAAACCUUCg.................................................... len:23 al:224 ....................UUGCCGUUAACCCAAAACa........................................................ len:19 al:5 ....................UaGCCGUUAACCCAAAACCUUCA.................................................... len:23 al:3 ....................UUGCCGUUAACCCAgAACCUUC..................................................... len:22 al:7 ....................UUGCCGUUAACCCAuAACCUUC..................................................... len:22 al:1 ....................UUGCCGUUAACCCAAAACCa....................................................... len:20 al:45 ....................UUGCCGUUAACCCAAAACCUUCAc................................................... len:24 al:5 ....................UUGCCGUUAACCCAAAAuCUUCA.................................................... len:23 al:3 ....................UUGCCGUUAAuCCAAAACCUUCA.................................................... len:23 al:6 ....................UUGuCGUUAACCCAAAACCUUC..................................................... len:22 al:7 ....................UUGCCGUUAACCCAAAACCUUCAUc.................................................. len:25 al:7 ....................UUGCCGgUAACCCAAAACCUUCA.................................................... len:23 al:1 ....................UUGCCGUUAACCCAAAACCgUCA.................................................... len:23 al:2 ....................UUGCCGUUAACCCAAAACCUcC..................................................... len:22 al:37 ....................UUGCCGUUgACCCAAAACCUUCAU................................................... len:24 al:1 ....................UUGCCGUUAACCCAAAACCUgCA.................................................... len:23 al:2 ....................UUGuCGUUAACCCAAAACCUUCA.................................................... len:23 al:9 ....................UUuCCGUUAACCCAAAACCUUCA.................................................... len:23 al:2 ....................UUGCCGUUAACCCAAAACCUUuA.................................................... len:23 al:12 ....................UUGCCGUUAACCCAAAACCcUC..................................................... len:22 al:14 ....................UUcCCGUUAACCCAAAACCUUCA.................................................... len:23 al:1 ....................UUGCCGUUAACCCcAAACCUUCA.................................................... len:23 al:5 ....................UUGCCGaUAACCCAAAACCUUCA.................................................... len:23 al:1 ....................UUGCCuUUAACCCAAAACCUUCA.................................................... len:23 al:6 ....................UUGCCGUUAgCCCAAAACCU....................................................... len:20 al:1 ....................UUGCCGUUAACCCAAAACCUUCAUa.................................................. len:25 al:5 ....................gUGCCGUUAACCCAAAACCUUCA.................................................... len:23 al:2 ....................UUGCCGUUAACCCAAAgCCUUC..................................................... len:22 al:11 ....................UUGCCGUUAACuCAAAACCUUCA.................................................... len:23 al:3 ....................UUGCCGUUAACCuAAAACCUUCA.................................................... len:23 al:5 ....................UUGCCGUUAACCCAAAACCUUCAa................................................... len:24 al:8 ....................UUGCCGUUAACCCAAAACCUa...................................................... len:21 al:7 ....................UUGCCGUUAAaCCAAAACCUUCA.................................................... len:23 al:1 ....................UUGCCaUUAACCCAAAACCUUC..................................................... len:22 al:4 ....................UaGCCGUUAACCCAAAACCUUC..................................................... len:22 al:3 ....................UUGCuGUUAACCCAAAACCUUC..................................................... len:22 al:3 ....................UUGCCGUUAACCCAAAACgUUC..................................................... len:22 al:1 ....................UcGCCGUUAACCCAAAACCUUC..................................................... len:22 al:9 ....................UUGCCGUUAACCaAAAACCU....................................................... len:20 al:1 ....................UUaCCGUUAACCCAAAACCUUCA.................................................... len:23 al:4 ....................UUGCCGUUAACCCAAAACCUaCA.................................................... len:23 al:1 ....................aUGCCGUUAACCCAAAACCUUCA.................................................... len:23 al:27 ....................UUGCCGUUAACCCAAAACu........................................................ len:19 al:1 ....................UUGCCGUUAACCCAAAACCUUg..................................................... len:22 al:1 ....................UUGCCGUUAACCCAAAACCcUCA.................................................... len:23 al:15 ....................UUGCCGUUAACCCAcAACCUUCA.................................................... len:23 al:1 ....................UUGCCGUUAACCCAAAAa......................................................... len:18 al:2 ....................cUGCCGUUAACCCAAAACCUUC..................................................... len:22 al:43 ....................UUGCCGUUAACCCAAAACCUUCA.................................................... len:23 al:4844 ....................UUGCCGUUAAaCCAAAACCUUC..................................................... len:22 al:1 ....................UcGCCGUUAACCCAAAACCUUCA.................................................... len:23 al:13 ....................UcGCCGUUAACCCAAAACCUU...................................................... len:21 al:1 ....................UUGCCGcUAACCCAAAACCUUCA.................................................... len:23 al:8 ....................UUGCCaUUAACCCAAAACCUUCA.................................................... len:23 al:3 ....................UUGCCGUUAACCCAAAACCUUC..................................................... len:22 al:3888 ....................UUGCCGUaAACCCAAAACCUUCA.................................................... len:23 al:1 ....................UUGCaGUUAACCCAAAACCUUC..................................................... len:22 al:1 ....................UUGCCGUUAACCCAAAuCCUUCA.................................................... len:23 al:3 ....................UUGCCGUUgACCCAAAACCUUC..................................................... len:22 al:7 ....................UUGCCGUUAgCCCAAAACCUUCA.................................................... len:23 al:13 ....................UUGCCGUUAACCCAAAACCUUCAU................................................... len:24 al:12 ....................UUGCCGUUAACCCAAAACC........................................................ len:19 al:23 ....................UUGCCGUUAACCCAgAACCUUCA.................................................... len:23 al:16 ....................UUGCCGUUAACCCAAAACCUUCAUUU................................................. len:26 al:5 ....................UUGCuGUUAACCCAAAACCUUCA.................................................... len:23 al:7 ....................UUGCCGUUAACCCuAAACCUUC..................................................... len:22 al:1 ....................UUGCCGUUAACCCAAgACCUUCA.................................................... len:23 al:12 ....................UUGCCGUUAACCCAAAAC......................................................... len:18 al:6 ....................UUGCuGUUAACCCAAAACCUUCAU................................................... len:24 al:1 ....................UUGCCGUUAACCCgAAACCUUC..................................................... len:22 al:9 ....................UUGCCGUUAACCCAAAACuUUC..................................................... len:22 al:3 ....................UUGCCGUUAuCCCAAAACCUUC..................................................... len:22 al:1 ....................UUGCCGUUAACCCAAAACCUUCAUUa................................................. len:26 al:1 ....................UUGCCGUUAACCCAAAACCUUCAaUU................................................. len:26 al:1 ....................UUGCCGUUAACCCAAAgCCUUCA.................................................... len:23 al:24 ....................UUGCCGUUAACCCAAAACCUUCu.................................................... len:23 al:81 ....................aUGCCGUUAACCCAAAACCUUCAUUU................................................. len:26 al:1 ....................cUGCCGUUAACCCAAAACC........................................................ len:19 al:1 ....................cUGCCGUUAACCCAAAACCUUCAUU.................................................. len:25 al:2 ....................UUuCCGUUAACCCAAAACCUUC..................................................... len:22 al:1 ....................UUGCCGUUAACCCgAAACCUUCA.................................................... len:23 al:11 ....................UUGCCGUUAACCCAAAcCCUUC..................................................... len:22 al:2 ....................aUGCCGUUAACCCAAAACCUUC..................................................... len:22 al:8 ....................UUGCCGUUAACCCAAAACCUc...................................................... len:21 al:26 ....................UUGCCGUUAACCCAAAACCU....................................................... len:20 al:95 ....................UUGCCGUUAACCCAAAACCUUCuU................................................... len:24 al:3 ....................UUGCCGUUAACCCAAAACaUUC..................................................... len:22 al:1 ....................UUaCCGUUAACCCAAAACCUUC..................................................... len:22 al:6 ....................UUGCCGUUAACCCAAAACCUaC..................................................... len:22 al:74 ....................UUGCCGUUAACCCAAAACCUg...................................................... len:21 al:1 ....................UUGCCGUUAACCCAAAACCUUCAUUUACU.............................................. len:29 al:1 ....................UUGCCGUUAACCCAAAACCUUaA.................................................... len:23 al:2 ....................UUGCCGUUAACCCAAAACCgUC..................................................... len:22 al:2 ....................UUGCCGUUAACCCAAAACCUcCA.................................................... len:23 al:25 ....................UUGCCGUUAACCCAAAACaUUCA.................................................... len:23 al:2 ....................UgGCCGUUAACCCAAAACCUUCA.................................................... len:23 al:2 ....................UUGCCGUUAACCaAAAACCUUCA.................................................... len:23 al:1 ....................UUGCCGUcAACCCAAAACCUUCA.................................................... len:23 al:9 .....................UGCCGcUAACCCAAAACCUUC..................................................... len:21 al:2 .....................UGCCGUUAACCCAAAACCa....................................................... len:19 al:4 .....................UGCCGUUAACCCAAAACCUcCA.................................................... len:22 al:2 .....................UGCCGUUAACCCAAAACCUaC..................................................... len:21 al:7 .....................UGCCGUUAACCCAAgACCUUCA.................................................... len:22 al:1 .....................UGCCGUUAACCCAAAACCUUCAa................................................... len:23 al:1 .....................UGCCGUUAACCCAAAACCUUCAc................................................... len:23 al:3 .....................UGCCGUUAACCCAAAACCUUCg.................................................... len:22 al:11 .....................cGCCGUUAACCCAAAACCUUCAU................................................... len:23 al:1 .....................UGCCGUUAACCCAAAACCUUCAUUU................................................. len:25 al:2 .....................UGCCGUUAACCCAAAACCUUCA.................................................... len:22 al:299 .....................UGCCGUUAACCCAAAgCCUUC..................................................... len:21 al:2 .....................UGCCGUUAACCCAAAACCUgC..................................................... len:21 al:1 .....................UGuCGUUAACCCAAAACCUUCA.................................................... len:22 al:1 .....................UGCCGUUAACCCAAAACCUU...................................................... len:20 al:1 .....................UuCCGUUAACCCAAAACCUUCA.................................................... len:22 al:1 .....................UGCCGUUAACCCAAAACC........................................................ len:18 al:1 .....................UGCCGUUAACCCAAAACuUUC..................................................... len:21 al:1 .....................UGCCGUUAACCCAAAACCUUCAUa.................................................. len:24 al:1 .....................UGCCGUUAACCCAAAACCUUaA.................................................... len:22 al:1 .....................UGCCGUUAACCCAAAACCUUa..................................................... len:21 al:10 .....................UGCCGUUAACCCAAAgCCUUCA.................................................... len:22 al:1 .....................UGCCGUUAACCCAAAACCUUC..................................................... len:21 al:194 .....................UGCCGUUgACCCAAAACCUUCA.................................................... len:22 al:2 .....................UGCCGUUAACuCAAAACCUUCA.................................................... len:22 al:1 .....................UGCCGUUAACCCAAAACCUUCAU................................................... len:23 al:3 .....................cGCCGUUAACCCAAAACCUUCA.................................................... len:22 al:2 .....................UGCCGUUAACCCAAAACCU....................................................... len:19 al:2 .....................UGCCGUUAACCaAAAACCUUCA.................................................... len:22 al:2 .....................UGCCGUUAgCCCAAAACCUUC..................................................... len:21 al:3 .....................UGCCGUUAACCCAAAACaUUCA.................................................... len:22 al:1 .....................cGCCGUUAACCCAAAACCUUC..................................................... len:21 al:1 .....................UGCCGUUAACCCAAAACCUUu..................................................... len:21 al:3 .....................UGCaGUUAACCCAAAACCUUCA.................................................... len:22 al:1 .....................UaCCGUUAACCCAAAACCUUCA.................................................... len:22 al:2 .....................UGCaGUUAACCCAAAACCUUC..................................................... len:21 al:1 .....................UGCCGUUAACCCAAAACCUgCA.................................................... len:22 al:1 .....................UGCCGUUAACCCAAAACu........................................................ len:18 al:1 .....................UGCCGUUAACCCAgAACCUUCA.................................................... len:22 al:1 .....................aGCCGUUAACCCAAAACCUUC..................................................... len:21 al:2 .....................aGCCGUUAACCCAAAACCUUCA.................................................... len:22 al:1 ......................GCCGUUAACCCAAAACCUUC..................................................... len:20 al:4 ......................GCCGUUAACCCAAAACCUUCu.................................................... len:21 al:2 ......................GCCGUUAACCCAAAACCUUCg.................................................... len:21 al:1 ......................GCCGUUAACCCAAAACCUUCA.................................................... len:21 al:9 ........................CGUUAACCCAAAACCUUC..................................................... len:18 al:1 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACUU........................ len:28 al:2 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACc......................... len:27 al:1 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACgUA....................... len:29 al:14 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACgU........................ len:28 al:4 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACUUA....................... len:29 al:9 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACgUAC...................... len:30 al:1 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACgUACA..................... len:31 al:1 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACUUc....................... len:29 al:1 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACUa........................ len:28 al:1 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACUUu....................... len:29 al:1 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACUUAC...................... len:30 al:7 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACUUACu..................... len:31 al:1 ...........................................UUUACUAAAGGUcUUGGGCUAGCGACUUA....................... len:29 al:4 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACUUACA..................... len:31 al:1 ...........................................UUUACUAAAGGUGUUGGGCUAGCGACUUACc..................... len:31 al:1 .............................................UACUAAAGGUGUUGGGCUAGCGACUUu....................... len:27 al:1 .............................................UACUAAAGGUcUUGGGCUAGCGACUUA....................... len:27 al:2 .............................................UACUAAAGGUGUUGGGCUAGCGACUUc....................... len:27 al:1 .............................................UACUAAAGGUGUUGGGCUAGCGACgUACA..................... len:29 al:1 .............................................UACUAAAGGUGUUGGGCUAGCGACUUA....................... len:27 al:1 ..............................................ACUAAAGGUGUUGGGCUAGCGACgUACA..................... len:28 al:1 ..............................................ACUAAAGGUGUUGGGCUAGCGACUUc....................... len:26 al:1 ...............................................CUAAAGGUcUUGGGCUAGCGACUUA....................... len:25 al:1 ...............................................CUAAAGGUGUUGGGCUAGCGACUUAC...................... len:26 al:2 ................................................UAAAGGUGUUGGGCUAGCGACUU........................ len:23 al:4 ................................................UAAAGGUGUUGGGCUAGCGACgU........................ len:23 al:23 ................................................UAAAGGUcUUGGGCUAGCGACUUA....................... len:24 al:1 ................................................UAAAGGUGUUGGGCUAGCGACgUACA..................... len:26 al:2 ................................................UAAAGGUGUUGGGCUAGCGACgUAC...................... len:25 al:1 ................................................UAAAGGUGUUGGGCUAGCGACUUA....................... len:24 al:6 ................................................UAAAGGUGUUGGGCUAGCGAC.......................... len:21 al:2 ................................................UAAAGGUGUUGGGCUAGCGACU......................... len:22 al:1 ................................................UAAAGGUGUUGGGCUAGCGACUUACu..................... len:26 al:1 ................................................UAAAGGUGUUGGGCUAGCGACUUAu...................... len:25 al:1 ................................................UAAAGGUGUUGGGCUAGCGACgUA....................... len:24 al:21 ................................................UAAAGGUcUUGGGCUAGCGACUU........................ len:23 al:1 .................................................AAAGGUGUUGGGCUAGCG............................ len:18 al:1 .................................................AAAGGUGUUGGGCUAGCGACgUAC...................... len:24 al:4 .................................................AAAGGUcUUGGGCUAGCGACUUACA..................... len:25 al:2 .................................................AAAGGUGUUGGGCUAGCGACUUA....................... len:23 al:8 .................................................AAAGGUGUUGGGCUAGCGACUUACu..................... len:25 al:4 .................................................AAAGGUGUUGGGCUAGCGACc......................... len:21 al:1 .................................................cAAGGUGUUGGGCUAGCGACUUA....................... len:23 al:1 .................................................AAAGGUcUUGGGCUAGCGACUUA....................... len:23 al:5 .................................................AAAGGUGUUGGGCUAGCGACU......................... len:21 al:3 .................................................AAAGGUGUUGGGCUAGCGACUUAC...................... len:24 al:1 .................................................AAAGGUGUUGGGCUAGCGACgU........................ len:22 al:23 .................................................AAAGGUGUUGGGCUAGCGACgUA....................... len:23 al:24 .................................................AAAGGUcUUGGGCUAGCGACUUAC...................... len:24 al:1 .................................................AAAGGUGUUGGGCUAGCGACUU........................ len:22 al:3 .................................................gAAGGUGUUGGGCUAGCGACU......................... len:21 al:1 .................................................AAAGGUGUUGGGCUAGCGu........................... len:19 al:1 .................................................AAAGGUGUUGGGCUAGCGACg......................... len:21 al:3 .................................................AAAGGUGUUGGGCUAGCGACUUAu...................... len:24 al:6 ..................................................AAGGUGUUGGGCUAGCGACgUAC...................... len:23 al:17 ..................................................AAGGUGUUGGGCUAGCGACUUu....................... len:22 al:2 ..................................................AAGGUGUUGGGCUAGCGACa......................... len:20 al:1 ..................................................AAGGUGUUGGGCUAGCGACUUACu..................... len:24 al:17 ..................................................AAGGUGUUGGGCUAGCGACUUAC...................... len:23 al:35 ..................................................AAGGUGUUGGGCUAGCGACgU........................ len:21 al:60 ..................................................AAGGUGUUGGGCUAGCGACUg........................ len:21 al:1 ..................................................AAGGUGUUGGGCUAGCGACUUACg..................... len:24 al:1 ..................................................AAGGUcUUGGGCUAGCGACUUA....................... len:22 al:16 ..................................................AAGGUGUUGGGCUAGCGACUUACAuA................... len:26 al:1 ..................................................AAGGUGUUGGGCUAGCGACUUAu...................... len:23 al:1 ..................................................AcGGUGUUGGGCUAGCGACUU........................ len:21 al:1 ..................................................AAGGUGUUGGGCUAGCGACUUACuA.................... len:25 al:1 ..................................................AAGGUGUUGGGCUAGCGA........................... len:18 al:1 ..................................................AAGGUGUUGGGCUAGCGACcU........................ len:21 al:1 ..................................................AAGGUGUUGGGCUAGCGACUUAuA..................... len:24 al:1 ..................................................AAGGUGUUGGGCUAGCGACUUAa...................... len:23 al:2 ..................................................AgGGUGUUGGGCUAGCGACUUACA..................... len:24 al:1 ..................................................AAGGUGUcGGGCUAGCGACUUACA..................... len:24 al:1 ..................................................cAGGUGUUGGGCUAGCGACUUAC...................... len:23 al:1 ..................................................AAGGUGUUGGGCUAGCGACUUACc..................... len:24 al:5 ..................................................AAGGUGUUGGGCUAGCGuCUUAC...................... len:23 al:1 ..................................................AAGGUGUUGGGCUAGCGACU......................... len:20 al:1 ..................................................AAGGUcUUGGGCUAGCGACUUAC...................... len:23 al:6 ..................................................AAGGUGUUGGGCUAGCGACUUACA..................... len:24 al:26 ..................................................AgGGUGUUGGGCUAGCGACUUAC...................... len:23 al:1 ..................................................cAGGUGUUGGGCUAGCGACUUA....................... len:22 al:1 ..................................................AAGGUcUUGGGCUAGCGACUUACA..................... len:24 al:34 ..................................................AAGGUGUUGGGCUAGCGACUU........................ len:21 al:9 ..................................................AAGGUGUUGGGCUAGCGACUUA....................... len:22 al:13 ..................................................AAGGUGUUGGGCUAGCGACaU........................ len:21 al:2 ..................................................AAGGUGUUGGGCUAGCGACgUA....................... len:22 al:41 ..................................................AAGGUGUUGGGCUAGCGACgUACA..................... len:24 al:10 ..................................................AAGGUGUUGGGCUAGCGACUa........................ len:21 al:1 ..................................................AAGGUGUUGGGCUAGaGACUUAC...................... len:23 al:1 ..................................................AAGGUGUUGGGCUAGCGACg......................... len:20 al:1 ...................................................AGGUGUUGGGCUAGCGACUUAa...................... len:22 al:1 ...................................................AGGUGUUGGGCUAGCGACcUAC...................... len:22 al:4 ...................................................AGGUGUUGGGCUAGCGACgUA....................... len:21 al:2 ...................................................AGGUGcUGGGCUAGCGACUUAC...................... len:22 al:4 ...................................................AGGUGUUaGGCUAGCGACUUACA..................... len:23 al:1 ...................................................AaGUGUUGGGCUAGCGACUUAC...................... len:22 al:5 ...................................................AGGUGUUGGGCUAGCGACUUACuA.................... len:24 al:1 ...................................................uGGUGUUGGGCUAGCGACUUAC...................... len:22 al:1 ...................................................AGGUGUUGGGCUAGCGACgUAC...................... len:22 al:26 ...................................................AGGUGUUGGGCUAaCGACUUACA..................... len:23 al:1 ...................................................AGGUGUUGGGCUAGCGACUUu....................... len:21 al:2 ...................................................AGGUGUUGGGCUAGCGACUUAC...................... len:22 al:119 ...................................................AGGUcUUGGGCUAGCGACUUA....................... len:21 al:1 ...................................................AaGUGUUGGGCUAGCGACUU........................ len:20 al:1 ...................................................gGGUGUUGGGCUAGCGACUUACA..................... len:23 al:1 ...................................................AGGUGUUGGGCUAGCGACUUACAu.................... len:24 al:1 ...................................................AGGUGUUGGGCUAGCGgCUUAC...................... len:22 al:2 ...................................................AGGUGUUGGGCUAGCGACgU........................ len:20 al:5 ...................................................AGGUcUUGGGCUAGCGACUU........................ len:20 al:1 ...................................................AGGUGUUGGGCUAGCGACa......................... len:19 al:1 ...................................................AGGUGUUGGGCUAGCGACUUA....................... len:21 al:3 ...................................................AGGUcUUGGGCUAGCGACUUAC...................... len:22 al:2 ...................................................AaGUGUUGGGCUAGCGACUUACA..................... len:23 al:1 ...................................................AGGUGUUGGGCUAGCGACUUACc..................... len:23 al:2 ...................................................AGGUGUUGGGCUAGCGACUUACg..................... len:23 al:6 ...................................................AGGUGUUGGGCUAGCGACUUAu...................... len:22 al:10 ...................................................gGGUGUUGGGCUAGCGACUUAC...................... len:22 al:1 ...................................................AGGUGUUGGGCUAGCGAaUUACA..................... len:23 al:1 ...................................................AGGUGUUGGGCUAGCGACUUACA..................... len:23 al:88 ...................................................cGGUGUUGGGCUAGCGACUUACA..................... len:23 al:1 ...................................................AGGUGUUGGGCUAGCGACUc........................ len:20 al:4 ...................................................AGGUGUUGGGCUAGCGACUUgC...................... len:22 al:1 ...................................................AGGUGUUGGGCUAGCGACUUACu..................... len:23 al:22 ...................................................AGGUGUUGGGCUAGCGACc......................... len:19 al:1 ...................................................AGGUGUUGGGCUAGCGACUU........................ len:20 al:5 ...................................................AGGUcUUGGGCUAGCGACUUACA..................... len:23 al:3 ...................................................AGGUGUUGGGCUAGCGACgUACA..................... len:23 al:9 ....................................................GGUGUUGGGCUAGCGACUUACu..................... len:22 al:3 ....................................................GGUGUUGGGCUAGCGACgUA....................... len:20 al:3 .....................................................GUGUUGGGCUAGCGACgUA....................... len:19 al:1 .....................................................GUGUUGGGCUAGCGACUUAC...................... len:20 al:3 .....................................................GUGUUGGGCUAGCGACUUACu..................... len:21 al:2 ......................................................UcUUGGGCUAGCGACUUACA..................... len:20 al:13 ......................................................UGUUGGGCUAGCGACgUACA..................... len:20 al:3 ......................................................UGUUGGGCUAGCGACUUACu..................... len:20 al:2 .........................................................................AAAAUCUGUAGGAUGCCAUGCC len:22 al:1 .........................................................................AAAAUCUGUAGGAUGCCAUGa. len:21 al:1 .........................................................................AAAAUCUGUAGGAUGCCAUGCa len:22 al:1