Locus	Name	Chrom	Start	End	Length	Reads	DistinctSequences	FracTop	Strand	MajorRNA	MajorRNAReads	Short	Long	21	22	23	24	DicerCall	MIRNA	known_miRNAs
Pocillopora_meandrina_HIv1___Sc0000000:9092-9521	Cluster_1	Pocillopora_meandrina_HIv1___Sc0000000	9092	9521	430	10746	359	1.0	+	GGGGGUAUAGCUCAGUGGUAGA	3828	1458	3708	639	4351	170	420	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:53578-53997	Cluster_2	Pocillopora_meandrina_HIv1___Sc0000000	53578	53997	420	286	13	0.9965034965034965	+	GCCUAAGUUGCUUGGAACA	137	284	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:150243-150718	Cluster_3	Pocillopora_meandrina_HIv1___Sc0000000	150243	150718	476	2549	247	0.0	-	UGGCUAUGAUGAAAAUGACU	335	849	380	634	376	139	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:173728-174150	Cluster_4	Pocillopora_meandrina_HIv1___Sc0000000	173728	174150	423	1257	65	0.9968178202068417	+	UUUGAUUGCUGUGAUCUGGUUG	432	106	2	39	636	444	30	22	N	apa-mir-2050_Exaiptasia_pallida_Baumgarten_et_al._2017_miR-2050;_Nve;_Spis;_Adi
Pocillopora_meandrina_HIv1___Sc0000000:187562-188076	Cluster_5	Pocillopora_meandrina_HIv1___Sc0000000	187562	188076	515	182	36	0.42857142857142855	.	AUAAAUGUCACUACAAGAAACCUGAAAUCGU	25	0	174	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:485730-486254	Cluster_6	Pocillopora_meandrina_HIv1___Sc0000000	485730	486254	525	286	127	1.0	+	GAUGGGUGUUAUUACUCCUCAGACAGAC	48	66	183	7	11	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:496020-496432	Cluster_7	Pocillopora_meandrina_HIv1___Sc0000000	496020	496432	413	72	24	1.0	+	AUGUAGUCGAGCAAAGUCCAUGUGGACGA	27	0	66	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:525310-527341	Cluster_8	Pocillopora_meandrina_HIv1___Sc0000000	525310	527341	2032	14737	2989	0.17866594286489787	-	UUUUCGUCACUUUCUUCAGCCUCAGAGU	966	140	13633	54	106	304	500	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:541262-541723	Cluster_9	Pocillopora_meandrina_HIv1___Sc0000000	541262	541723	462	756	142	0.0873015873015873	-	UUGGACGAAAUUUCGAGGUUCACACUCGUU	91	1	750	0	4	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:551888-552690	Cluster_10	Pocillopora_meandrina_HIv1___Sc0000000	551888	552690	803	825	253	0.23030303030303031	.	UUCAAGGAGGAUGUAUCCACUGUCAUU	91	15	755	7	7	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:555672-556458	Cluster_11	Pocillopora_meandrina_HIv1___Sc0000000	555672	556458	787	836	193	0.07057416267942583	-	UUGGACGAAAUUUCGAGGUUCACACUCGUU	93	3	818	2	3	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:580920-581465	Cluster_12	Pocillopora_meandrina_HIv1___Sc0000000	580920	581465	546	194	83	0.8762886597938144	+	UCAAAUACAACACCAAAAGAC	47	10	105	58	2	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:585574-585983	Cluster_13	Pocillopora_meandrina_HIv1___Sc0000000	585574	585983	410	89	53	0.9101123595505618	+	UACCGUGAGACUGAAGAACAAAAUUCAAA	11	3	77	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:591367-591939	Cluster_14	Pocillopora_meandrina_HIv1___Sc0000000	591367	591939	573	646	193	0.9442724458204335	+	UGCAUUUUCUCCGAGAUCUCUGGUCGGG	90	11	612	5	1	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:639521-640061	Cluster_15	Pocillopora_meandrina_HIv1___Sc0000000	639521	640061	541	551	148	0.7840290381125227	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	176	0	537	3	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:659874-660274	Cluster_16	Pocillopora_meandrina_HIv1___Sc0000000	659874	660274	401	98	36	0.3877551020408163	.	AAGGGUAAAAAAGCUGACGUA	14	43	5	28	20	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:721030-721459	Cluster_17	Pocillopora_meandrina_HIv1___Sc0000000	721030	721459	430	631	61	1.0	+	UGAUGAUCGUAAUGAUUUCCAUGGGGU	133	4	597	0	1	22	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:721923-722470	Cluster_18	Pocillopora_meandrina_HIv1___Sc0000000	721923	722470	548	2930	430	1.0	+	UAGCAUACAUGUAGACCCUGGUAGAGUA	487	281	1973	86	277	194	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:727164-727725	Cluster_19	Pocillopora_meandrina_HIv1___Sc0000000	727164	727725	562	842	192	1.0	+	GACCACAUGUUACUGAUGAGCUUAGU	143	74	556	22	53	66	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:815898-816398	Cluster_20	Pocillopora_meandrina_HIv1___Sc0000000	815898	816398	501	1442	483	0.005547850208044383	-	UACUUAUAAGCAGUAGAGGCGUU	70	433	466	184	94	168	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:818027-818120	Cluster_21	Pocillopora_meandrina_HIv1___Sc0000000	818027	818120	94	12096	283	0.9990906084656085	+	UGUUCUCUCUGCAGUAAGCAUGU	3258	393	78	202	3329	5487	2607	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:987729-988269	Cluster_22	Pocillopora_meandrina_HIv1___Sc0000000	987729	988269	541	557	148	0.7989228007181328	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	196	0	534	2	1	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1215326-1215757	Cluster_23	Pocillopora_meandrina_HIv1___Sc0000000	1215326	1215757	432	1003	170	0.031904287138584245	-	GUCUUUGUAGUGUAGUGG	186	536	427	15	11	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1276027-1276447	Cluster_24	Pocillopora_meandrina_HIv1___Sc0000000	1276027	1276447	421	129	55	1.0	+	CGGCUGUUAACCGAAAGGUUA	13	18	29	18	30	25	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1276611-1277082	Cluster_25	Pocillopora_meandrina_HIv1___Sc0000000	1276611	1277082	472	1970	530	1.0	+	CCAAUGGAUAAGGCAUCUGACUGCG	67	401	984	100	162	147	176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1336780-1337291	Cluster_26	Pocillopora_meandrina_HIv1___Sc0000000	1336780	1337291	512	2033	463	0.005902606984751598	-	UCCCGGGUCUCGGCAGCCUUUU	270	299	295	383	535	365	156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1378697-1379231	Cluster_27	Pocillopora_meandrina_HIv1___Sc0000000	1378697	1379231	535	1361	425	0.0007347538574577516	-	UAAGACUUUCAUUUAGACCUGGAACAAUU	119	167	875	41	53	143	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1688897-1689413	Cluster_28	Pocillopora_meandrina_HIv1___Sc0000000	1688897	1689413	517	427	198	0.5550351288056206	.	ACAUUUAGUAAUUACAAGAACCAUGACACU	46	4	391	3	5	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1750814-1751514	Cluster_29	Pocillopora_meandrina_HIv1___Sc0000000	1750814	1751514	701	245	123	0.9142857142857143	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	27	2	232	0	4	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1752745-1753174	Cluster_30	Pocillopora_meandrina_HIv1___Sc0000000	1752745	1753174	430	289	159	0.8615916955017301	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	1	269	3	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1837731-1838146	Cluster_31	Pocillopora_meandrina_HIv1___Sc0000000	1837731	1838146	416	140	83	0.8928571428571429	+	UCAGGAGACAGUCGAAAACAAACAGACA	9	0	135	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2007021-2007452	Cluster_32	Pocillopora_meandrina_HIv1___Sc0000000	2007021	2007452	432	299	100	0.033444816053511704	-	UGUGUAAACAUUGCAACACGAUCUGACAGA	24	3	294	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2063456-2063972	Cluster_33	Pocillopora_meandrina_HIv1___Sc0000000	2063456	2063972	517	4212	627	0.002849002849002849	-	AAGGAUGCCGAGAUAGCUC	744	1534	481	559	971	492	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2159721-2160378	Cluster_34	Pocillopora_meandrina_HIv1___Sc0000000	2159721	2160378	658	1142	333	0.08756567425569177	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	97	7	1086	5	3	17	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2160616-2161042	Cluster_35	Pocillopora_meandrina_HIv1___Sc0000000	2160616	2161042	427	255	132	0.12549019607843137	-	UGAGUCGAGGUUAUUCACAAUACGAGC	39	6	223	2	1	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2750560-2752027	Cluster_36	Pocillopora_meandrina_HIv1___Sc0000000	2750560	2752027	1468	1801	768	0.9511382565241533	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	49	16	1691	8	22	25	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2872019-2872110	Cluster_37	Pocillopora_meandrina_HIv1___Sc0000000	2872019	2872110	92	177	29	1.0	+	AUAGUAUUGUCGACAGGUACU	63	16	0	116	42	3	0	21	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:2959024-2959448	Cluster_38	Pocillopora_meandrina_HIv1___Sc0000000	2959024	2959448	425	137	78	0.9635036496350365	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	15	1	121	6	4	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2959658-2960409	Cluster_39	Pocillopora_meandrina_HIv1___Sc0000000	2959658	2960409	752	1439	579	0.7956914523974983	.	UUCCAGCACAAAAGAGACAAAAGGAGUUCAA	77	33	1205	19	30	57	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3005020-3005445	Cluster_40	Pocillopora_meandrina_HIv1___Sc0000000	3005020	3005445	426	86	30	0.0	-	UCCGAUUUAAAAGAUUCUUUGUUUGU	23	0	85	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3005892-3006331	Cluster_41	Pocillopora_meandrina_HIv1___Sc0000000	3005892	3006331	440	913	153	0.01533406352683461	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	231	3	894	3	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3006339-3006751	Cluster_42	Pocillopora_meandrina_HIv1___Sc0000000	3006339	3006751	413	133	73	0.18796992481203006	-	UUCUUUGUAACGCUGUGGUCCUUCCAC	17	2	112	2	1	12	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3563547-3563966	Cluster_43	Pocillopora_meandrina_HIv1___Sc0000000	3563547	3563966	420	77	21	0.987012987012987	+	GAAUAUUGGAGAACUCGUGGUUGUGCAGU	31	6	67	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3581969-3582415	Cluster_44	Pocillopora_meandrina_HIv1___Sc0000000	3581969	3582415	447	343	152	0.5860058309037901	.	UUAUUUCUACAUAGAGUGAGCUCACAUC	90	35	250	26	8	16	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3603652-3604077	Cluster_45	Pocillopora_meandrina_HIv1___Sc0000000	3603652	3604077	426	230	32	0.034782608695652174	-	UAAGACAUUGGCAUACUUGGCAUACA	171	1	222	0	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3628199-3628623	Cluster_46	Pocillopora_meandrina_HIv1___Sc0000000	3628199	3628623	425	73	10	0.0	-	UGAACUACUGCUCGUACUCUAGAUACG	38	1	72	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3691324-3691932	Cluster_47	Pocillopora_meandrina_HIv1___Sc0000000	3691324	3691932	609	7968	1062	0.0	-	CACUCUGAGAAGUGGAGAGACAGUU	1569	489	5213	283	301	433	1249	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3821021-3821448	Cluster_48	Pocillopora_meandrina_HIv1___Sc0000000	3821021	3821448	428	155	90	0.07096774193548387	-	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	20	35	80	22	11	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3822573-3823003	Cluster_49	Pocillopora_meandrina_HIv1___Sc0000000	3822573	3823003	431	177	100	0.022598870056497175	-	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	21	38	86	23	14	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3848323-3848809	Cluster_50	Pocillopora_meandrina_HIv1___Sc0000000	3848323	3848809	487	9519	593	0.0	-	AUACUGUGAUGAAGAAAAGGACUCCCU	1427	540	5690	506	595	1533	655	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3848821-3849297	Cluster_51	Pocillopora_meandrina_HIv1___Sc0000000	3848821	3849297	477	256	162	0.00390625	-	GAUGACAACAAGAAACUUGGAGAA	9	59	101	27	24	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3849327-3849741	Cluster_52	Pocillopora_meandrina_HIv1___Sc0000000	3849327	3849741	415	185	120	0.005405405405405406	-	GUAUGUUAAGCUUGUUGAGGCCCUGU	11	53	79	23	10	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4241544-4242078	Cluster_53	Pocillopora_meandrina_HIv1___Sc0000000	4241544	4242078	535	2564	378	1.0	+	CCUGGGAAAUGGAAUCCAACAGAA	847	295	1053	150	53	72	941	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4422273-4423231	Cluster_54	Pocillopora_meandrina_HIv1___Sc0000000	4422273	4423231	959	940	368	0.498936170212766	.	UCACACUUUUGUCUCGCAAGUCGUUGGCG	89	52	760	2	16	55	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4423698-4424118	Cluster_55	Pocillopora_meandrina_HIv1___Sc0000000	4423698	4424118	421	137	59	0.5109489051094891	.	UUAUAAGGAUCUUAAGGCGAAUAAAGCA	30	7	59	13	10	33	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4429481-4429904	Cluster_56	Pocillopora_meandrina_HIv1___Sc0000000	4429481	4429904	424	217	105	0.9539170506912442	+	UCAAAAGCUGCCGAUAAAUCUAAA	32	3	159	1	5	6	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4429917-4430343	Cluster_57	Pocillopora_meandrina_HIv1___Sc0000000	4429917	4430343	427	143	75	0.9020979020979021	+	UCAGACUAGCAACAUGAUCUUCGGUGA	21	2	133	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4430717-4431145	Cluster_58	Pocillopora_meandrina_HIv1___Sc0000000	4430717	4431145	429	436	130	0.9334862385321101	+	UGUACAAGGUCGAAAGAAUCCAGGAUA	180	1	406	1	0	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4431213-4432144	Cluster_59	Pocillopora_meandrina_HIv1___Sc0000000	4431213	4432144	932	1028	330	0.958171206225681	+	UAAUGACUUCAGAGUAGACAGAGACGGU	74	6	989	8	4	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4528179-4528608	Cluster_60	Pocillopora_meandrina_HIv1___Sc0000000	4528179	4528608	430	142	42	0.035211267605633804	-	UCUAUGAUCUUAUAAUGCGACAGUAUGAUU	33	1	139	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4531785-4532259	Cluster_61	Pocillopora_meandrina_HIv1___Sc0000000	4531785	4532259	475	1076	308	0.0018587360594795538	-	CCUUAGUGAUGAUAGAAGAUGCCGC	45	179	495	97	101	92	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4532302-4532705	Cluster_62	Pocillopora_meandrina_HIv1___Sc0000000	4532302	4532705	404	140	97	0.007142857142857143	-	CAAGAGUGAAACUGGAUGGUC	4	35	43	17	18	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4534325-4534799	Cluster_63	Pocillopora_meandrina_HIv1___Sc0000000	4534325	4534799	475	4303	627	0.0	-	AAAGUUUGAUUGAGAUGACAAAUAUUUCUG	369	475	2846	198	204	221	359	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4561521-4561940	Cluster_64	Pocillopora_meandrina_HIv1___Sc0000000	4561521	4561940	420	128	47	0.0	-	GUUCCGGGGAACUUGCCGUU	27	53	1	28	28	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4565330-4566337	Cluster_65	Pocillopora_meandrina_HIv1___Sc0000000	4565330	4566337	1008	716	314	0.0935754189944134	-	UUAUAGCAAACAAAUACAUCAUCCUGGA	55	4	668	3	9	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4595759-4596189	Cluster_66	Pocillopora_meandrina_HIv1___Sc0000000	4595759	4596189	431	215	113	0.8186046511627907	+	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	15	1	205	1	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4616213-4616640	Cluster_67	Pocillopora_meandrina_HIv1___Sc0000000	4616213	4616640	428	186	69	0.6021505376344086	.	UCGAUUCCACCGAAAGAAAUAACCUGUG	39	12	159	5	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4754952-4755436	Cluster_68	Pocillopora_meandrina_HIv1___Sc0000000	4754952	4755436	485	21233	194	9.419300145999152e-05	-	GUAGUCGUGGCCGAGUGG	11436	20883	45	102	49	64	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4905178-4905809	Cluster_69	Pocillopora_meandrina_HIv1___Sc0000000	4905178	4905809	632	220	129	0.7090909090909091	.	UGCAAUUGCGUGAUUUAAGUAAAAUGUUC	14	13	167	1	2	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5011888-5012317	Cluster_70	Pocillopora_meandrina_HIv1___Sc0000000	5011888	5012317	430	257	55	0.9922178988326849	+	UGAUCAAUUUGUGAAUGUCUGCACACCACU	88	0	251	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5113419-5113819	Cluster_71	Pocillopora_meandrina_HIv1___Sc0000000	5113419	5113819	401	180	100	0.9388888888888889	+	UAAGAUUUACACACUGAUCGACCAUGU	19	2	170	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5114054-5114478	Cluster_72	Pocillopora_meandrina_HIv1___Sc0000000	5114054	5114478	425	234	119	0.9658119658119658	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	28	1	220	1	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5114802-5115279	Cluster_73	Pocillopora_meandrina_HIv1___Sc0000000	5114802	5115279	478	324	124	0.9475308641975309	+	UCCAAUCACACACAGUUCUCCUGCGGC	66	0	305	1	1	2	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5115363-5116268	Cluster_74	Pocillopora_meandrina_HIv1___Sc0000000	5115363	5116268	906	2321	420	0.964670400689358	+	UAGGCAUUUGUCAGCAUUGAGAGUUAAG	437	15	2232	7	5	28	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5116660-5117931	Cluster_75	Pocillopora_meandrina_HIv1___Sc0000000	5116660	5117931	1272	1258	501	0.9141494435612083	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	106	11	1188	4	5	23	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5237977-5238405	Cluster_76	Pocillopora_meandrina_HIv1___Sc0000000	5237977	5238405	429	390	38	0.002564102564102564	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	306	0	389	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5304149-5304689	Cluster_77	Pocillopora_meandrina_HIv1___Sc0000000	5304149	5304689	541	1302	421	1.0	+	GUGCCUUGAAACUAUCUCUACUGUUCA	233	201	817	69	90	46	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5624826-5625249	Cluster_78	Pocillopora_meandrina_HIv1___Sc0000000	5624826	5625249	424	126	19	1.0	+	UUUGAACUCCUAAGAUCUGAUUGU	70	0	5	1	1	1	118	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5723088-5723491	Cluster_79	Pocillopora_meandrina_HIv1___Sc0000000	5723088	5723491	404	77	31	0.09090909090909091	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	21	1	73	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5724791-5725218	Cluster_80	Pocillopora_meandrina_HIv1___Sc0000000	5724791	5725218	428	194	64	0.005154639175257732	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	29	4	183	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6035690-6037541	Cluster_81	Pocillopora_meandrina_HIv1___Sc0000000	6035690	6037541	1852	18279	2668	0.10164669839706768	-	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3225	304	16162	212	106	205	1290	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6038529-6040210	Cluster_82	Pocillopora_meandrina_HIv1___Sc0000000	6038529	6040210	1682	2050	830	0.811219512195122	+	UCUAACGCGUUUGUCUGACAUCCCUUU	134	33	1829	22	34	38	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6054442-6055284	Cluster_83	Pocillopora_meandrina_HIv1___Sc0000000	6054442	6055284	843	2368	241	0.9940878378378378	+	UCCUCUUGGUAAGACAUAGUUCUGUAAACUU	606	8	2349	1	3	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6072276-6072713	Cluster_84	Pocillopora_meandrina_HIv1___Sc0000000	6072276	6072713	438	7589	777	0.9984187640005271	+	AUGUGAUUUCUGCCCAGUGCUCU	268	2707	1350	1045	884	1029	574	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6175141-6175559	Cluster_85	Pocillopora_meandrina_HIv1___Sc0000000	6175141	6175559	419	153	21	1.0	+	CUCUGUCUCUGUCCGUGU	47	153	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6300017-6300448	Cluster_86	Pocillopora_meandrina_HIv1___Sc0000000	6300017	6300448	432	276	84	0.6739130434782609	.	AUCGAUCGCGUUUCUCUUGC	76	217	4	51	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6432068-6432496	Cluster_87	Pocillopora_meandrina_HIv1___Sc0000000	6432068	6432496	429	1164	147	0.9991408934707904	+	UCAGCUCUUUCUAACUCUGCAAUUUGAG	287	0	1153	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6432523-6433169	Cluster_88	Pocillopora_meandrina_HIv1___Sc0000000	6432523	6433169	647	801	297	0.8913857677902621	+	UGAAAUACUUGUUCUUUUCCCUGGUUUGCC	100	4	736	11	6	8	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6523200-6523627	Cluster_89	Pocillopora_meandrina_HIv1___Sc0000000	6523200	6523627	428	82	21	0.9878048780487805	+	UGCGACAAACGAAGAGUAGAAAGUUUCUAC	43	1	72	3	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6781587-6782077	Cluster_90	Pocillopora_meandrina_HIv1___Sc0000000	6781587	6782077	491	497	289	1.0	+	CUUCGUUGAGAAUAGACGCCUGA	9	104	201	57	51	43	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6784342-6785024	Cluster_91	Pocillopora_meandrina_HIv1___Sc0000000	6784342	6785024	683	1451	628	0.9986216402481047	+	GAAGAGAAAAAGAACUCGUUGCU	105	314	453	210	117	269	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6785838-6786298	Cluster_92	Pocillopora_meandrina_HIv1___Sc0000000	6785838	6786298	461	270	127	1.0	+	CUUGAAGAAAGACUGGUCUCCA	27	101	51	22	61	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6786579-6787211	Cluster_93	Pocillopora_meandrina_HIv1___Sc0000000	6786579	6787211	633	1002	594	0.999001996007984	+	GACGACAACGAGCUCGGU	16	230	454	95	60	72	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6820857-6821266	Cluster_94	Pocillopora_meandrina_HIv1___Sc0000000	6820857	6821266	410	154	112	1.0	+	GAUGUGCGACGACCUCUGAGGAACA	6	46	50	21	17	15	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6863950-6864369	Cluster_95	Pocillopora_meandrina_HIv1___Sc0000000	6863950	6864369	420	183	116	1.0	+	CUUGUGUCAACUAAACUCCAACA	9	30	82	21	15	30	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6905074-6905503	Cluster_96	Pocillopora_meandrina_HIv1___Sc0000000	6905074	6905503	430	461	118	0.039045553145336226	-	AUCUUCUGAAUCAAGAAAAAAGAGGCUGG	152	1	441	1	4	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6905904-6906371	Cluster_97	Pocillopora_meandrina_HIv1___Sc0000000	6905904	6906371	468	3586	160	0.0019520356943669827	-	GAUCCAACAAGAACAAUAUGUGCUGACUA	1184	0	3583	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7029852-7030270	Cluster_98	Pocillopora_meandrina_HIv1___Sc0000000	7029852	7030270	419	1928	70	0.0025933609958506223	-	CCUCUACUUGACCUCAUU	1325	1928	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7039343-7040274	Cluster_99	Pocillopora_meandrina_HIv1___Sc0000000	7039343	7040274	932	3399	599	0.0	-	CAGGGGCCAUCUGAUGGAU	266	1041	1725	138	163	153	179	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7040841-7041266	Cluster_100	Pocillopora_meandrina_HIv1___Sc0000000	7040841	7041266	426	195	89	0.005128205128205128	-	AUGCAGUGAUGCUUUGAAUUUCUUCACCUGA	15	20	99	7	6	32	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7041283-7041776	Cluster_101	Pocillopora_meandrina_HIv1___Sc0000000	7041283	7041776	494	2820	358	0.0	-	GCUGGAUGAUGAGACUUUGCGAAGGU	305	850	984	200	219	278	289	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7041807-7042290	Cluster_102	Pocillopora_meandrina_HIv1___Sc0000000	7041807	7042290	484	2986	388	0.0	-	CUGAAUGAAAACAGAGUCUGAGCAGU	432	676	1242	154	263	254	397	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7042332-7042805	Cluster_103	Pocillopora_meandrina_HIv1___Sc0000000	7042332	7042805	474	516	119	0.0	-	CUGGAAUGAUGAAUAAUCC	30	177	261	13	23	10	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7100067-7100478	Cluster_104	Pocillopora_meandrina_HIv1___Sc0000000	7100067	7100478	412	292	206	0.9931506849315068	+	GUGGACUGAGCUUAAAUAGU	13	87	89	31	27	23	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7205683-7206107	Cluster_105	Pocillopora_meandrina_HIv1___Sc0000000	7205683	7206107	425	1021	73	1.0	+	UUGCGUUGCACAUGUGAACUAGGC	282	23	81	72	56	373	416	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7584506-7585242	Cluster_106	Pocillopora_meandrina_HIv1___Sc0000000	7584506	7585242	737	4011	562	0.9798055347793567	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	747	9	3933	5	2	12	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7586367-7586860	Cluster_107	Pocillopora_meandrina_HIv1___Sc0000000	7586367	7586860	494	530	235	0.7415094339622641	.	UGAAUCCACCACACUUGAAUUUAGACCC	35	16	462	8	12	6	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7587279-7588109	Cluster_108	Pocillopora_meandrina_HIv1___Sc0000000	7587279	7588109	831	394	215	0.9543147208121827	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	22	3	374	1	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7588145-7588910	Cluster_109	Pocillopora_meandrina_HIv1___Sc0000000	7588145	7588910	766	487	231	0.9158110882956879	+	UCCAAUCACACACAGUUCUCCUGCGGC	73	3	464	1	1	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7588994-7589421	Cluster_110	Pocillopora_meandrina_HIv1___Sc0000000	7588994	7589421	428	143	50	0.9370629370629371	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	56	0	135	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7590286-7592205	Cluster_111	Pocillopora_meandrina_HIv1___Sc0000000	7590286	7592205	1920	3446	1136	0.8760882182240278	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	121	22	3213	17	18	53	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7592666-7593548	Cluster_112	Pocillopora_meandrina_HIv1___Sc0000000	7592666	7593548	883	4651	765	0.847774672113524	+	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	627	17	4443	26	10	57	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7593750-7594800	Cluster_113	Pocillopora_meandrina_HIv1___Sc0000000	7593750	7594800	1051	4824	1050	0.9168739635157546	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	510	74	4518	18	24	71	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7594848-7595397	Cluster_114	Pocillopora_meandrina_HIv1___Sc0000000	7594848	7595397	550	4390	587	0.5938496583143508	.	UCUGUCUUGUACUUCCAUUUCUUCAUUG	494	44	4068	3	38	95	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7596727-7597157	Cluster_115	Pocillopora_meandrina_HIv1___Sc0000000	7596727	7597157	431	949	88	0.01053740779768177	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	558	2	933	1	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7598683-7600443	Cluster_116	Pocillopora_meandrina_HIv1___Sc0000000	7598683	7600443	1761	2229	749	0.21668909825033647	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	85	19	2058	8	6	40	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7600922-7601349	Cluster_117	Pocillopora_meandrina_HIv1___Sc0000000	7600922	7601349	428	156	56	0.01282051282051282	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	33	3	151	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7601404-7602137	Cluster_118	Pocillopora_meandrina_HIv1___Sc0000000	7601404	7602137	734	1150	296	0.058260869565217394	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	141	6	1102	3	5	19	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7656753-7658490	Cluster_119	Pocillopora_meandrina_HIv1___Sc0000000	7656753	7658490	1738	2754	1117	0.04502541757443718	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	108	23	2607	12	22	45	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7697508-7697937	Cluster_120	Pocillopora_meandrina_HIv1___Sc0000000	7697508	7697937	430	351	34	1.0	+	UAGAGUGUCAAACCACGAUGGAUGAUGAUC	197	1	341	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8103238-8103666	Cluster_121	Pocillopora_meandrina_HIv1___Sc0000000	8103238	8103666	429	269	35	1.0	+	AUAUUUACGACGAGGAGGAACGAUUUGAA	107	2	265	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8155944-8156371	Cluster_122	Pocillopora_meandrina_HIv1___Sc0000000	8155944	8156371	428	83	14	0.9879518072289156	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	35	0	83	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8246882-8247297	Cluster_123	Pocillopora_meandrina_HIv1___Sc0000000	8246882	8247297	416	133	55	0.0	-	UGAUCUUCAGAACUUCCUAUAUCAAAGAGGC	16	1	129	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8310086-8310514	Cluster_124	Pocillopora_meandrina_HIv1___Sc0000000	8310086	8310514	429	213	53	0.023474178403755867	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	83	1	209	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8311015-8311701	Cluster_125	Pocillopora_meandrina_HIv1___Sc0000000	8311015	8311701	687	1268	150	0.111198738170347	-	UCUAUCCCACCUGUAAUGAAAAAAUCUUUG	524	9	1230	10	5	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8311705-8312237	Cluster_126	Pocillopora_meandrina_HIv1___Sc0000000	8311705	8312237	533	364	123	0.005494505494505495	-	UGGAAAUGCACUAGAUGUGAAACUCUGGAA	25	1	349	3	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8426708-8427191	Cluster_127	Pocillopora_meandrina_HIv1___Sc0000000	8426708	8427191	484	346	142	0.0	-	UGUGUAGUAAACGCCAGAAACAUGA	20	60	128	41	28	36	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8427562-8428099	Cluster_128	Pocillopora_meandrina_HIv1___Sc0000000	8427562	8428099	538	817	264	0.0024479804161566705	-	UCUCACCUUGAAACUGGAAUGGCAAGCUU	158	91	549	33	28	49	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8608677-8609097	Cluster_129	Pocillopora_meandrina_HIv1___Sc0000000	8608677	8609097	421	400	66	0.9975	+	AAGAAAGAAGACCCUGGGAAU	116	195	6	168	13	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8734505-8734915	Cluster_130	Pocillopora_meandrina_HIv1___Sc0000000	8734505	8734915	411	203	146	0.0	-	CCUCAAGGACGUGCAGGAU	7	58	94	16	14	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8743606-8744021	Cluster_131	Pocillopora_meandrina_HIv1___Sc0000000	8743606	8744021	416	276	184	0.007246376811594203	-	GACGUGAAAAAGAACGAGGA	10	57	139	22	20	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8940693-8941187	Cluster_132	Pocillopora_meandrina_HIv1___Sc0000000	8940693	8941187	495	1994	309	0.19107321965897692	-	UCGACAACUUUCAGCCACAAAUCGUGCA	435	99	1685	28	27	114	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9256539-9256969	Cluster_133	Pocillopora_meandrina_HIv1___Sc0000000	9256539	9256969	431	581	112	0.06196213425129088	-	UUAACCGUUAUAGUUUUGACUUGAAUAU	96	0	499	2	48	1	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9257154-9257838	Cluster_134	Pocillopora_meandrina_HIv1___Sc0000000	9257154	9257838	685	3746	391	0.034970635344367326	-	CUGUGAACGAUGCCCUAGAUGUGGA	737	87	2899	46	229	269	216	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9265055-9265482	Cluster_135	Pocillopora_meandrina_HIv1___Sc0000000	9265055	9265482	428	319	66	0.9467084639498433	+	UAUGAUAUCACUGUGGAGCGAGG	87	7	142	2	6	123	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9279901-9280374	Cluster_136	Pocillopora_meandrina_HIv1___Sc0000000	9279901	9280374	474	509	149	0.9980353634577603	+	UUCCAAUGAUGAGGCAAAUCCAACUCU	63	61	389	15	14	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9284299-9284771	Cluster_137	Pocillopora_meandrina_HIv1___Sc0000000	9284299	9284771	473	547	165	0.9981718464351006	+	UUUCAGUGAUGAGUCAAAUCCAACUCCUAUU	69	65	357	23	51	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9285767-9286194	Cluster_138	Pocillopora_meandrina_HIv1___Sc0000000	9285767	9286194	428	253	47	1.0	+	GGAAUAAUAAUCGUGAUAACUGAGGAAU	86	31	192	6	6	13	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9286598-9287030	Cluster_139	Pocillopora_meandrina_HIv1___Sc0000000	9286598	9287030	433	762	167	1.0	+	GAAACUGUAACUGACUGAGGAAA	133	95	310	73	81	162	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9440859-9441685	Cluster_140	Pocillopora_meandrina_HIv1___Sc0000000	9440859	9441685	827	86496	3540	0.9999884387717352	+	UCCUUCCGGCCGGUCGUCGAC	10793	49046	5561	19768	6682	3578	1861	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9460512-9460942	Cluster_141	Pocillopora_meandrina_HIv1___Sc0000000	9460512	9460942	431	897	162	1.0	+	AACGAAAGUAAUGAGAUGGAGCUGAUA	230	4	877	3	5	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9465183-9465611	Cluster_142	Pocillopora_meandrina_HIv1___Sc0000000	9465183	9465611	429	587	52	0.9931856899488927	+	GGGGUGGACACUGUUUCGGAGAAGACUGC	140	26	522	3	29	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9797403-9798674	Cluster_143	Pocillopora_meandrina_HIv1___Sc0000000	9797403	9798674	1272	3491	660	0.10541392151246061	-	UGCGUGUAGAGGUAACUAAAGUCCCUUU	398	161	3102	21	32	88	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9799668-9800082	Cluster_144	Pocillopora_meandrina_HIv1___Sc0000000	9799668	9800082	415	99	38	0.1717171717171717	-	UGUUACAAAACCAUUAGAACUAUCAGUU	28	0	81	1	1	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9800095-9800513	Cluster_145	Pocillopora_meandrina_HIv1___Sc0000000	9800095	9800513	419	148	70	0.11486486486486487	-	UGCAUGUGCUUUGUCUUGGAUUUCAU	13	1	138	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9800666-9801089	Cluster_146	Pocillopora_meandrina_HIv1___Sc0000000	9800666	9801089	424	95	29	0.18947368421052632	-	UGUGAAUCAAUGGCUGAACUUUCCUUAUA	24	3	86	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9803048-9803772	Cluster_147	Pocillopora_meandrina_HIv1___Sc0000000	9803048	9803772	725	367	142	0.051771117166212535	-	UCACUGAUGUCGGAUGUCUGAGAUGCAUC	62	6	350	3	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9828155-9828582	Cluster_148	Pocillopora_meandrina_HIv1___Sc0000000	9828155	9828582	428	159	33	0.050314465408805034	-	UUGAUCUCUAUGGUUUGAAAGGUUAUGG	60	7	148	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9842833-9843262	Cluster_149	Pocillopora_meandrina_HIv1___Sc0000000	9842833	9843262	430	137	27	0.0	-	UCUAAGACAAUAAUUGGUACUGCAACGAGU	38	0	137	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9853254-9853662	Cluster_150	Pocillopora_meandrina_HIv1___Sc0000000	9853254	9853662	409	147	94	0.047619047619047616	-	UGUGAGCUUGUGGCUUCAUUACUGUGG	6	2	134	1	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9853689-9856016	Cluster_151	Pocillopora_meandrina_HIv1___Sc0000000	9853689	9856016	2328	16466	2097	0.013603789627110409	-	UAAUUCUUCCUUGAGCUGUGUUUUAAGA	946	56	16029	29	138	70	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9856063-9856639	Cluster_152	Pocillopora_meandrina_HIv1___Sc0000000	9856063	9856639	577	1154	340	0.06152512998266898	-	UGUUUCUGCGGUACGUGUCACCAUUGGC	109	12	1069	7	4	17	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9857383-9857809	Cluster_153	Pocillopora_meandrina_HIv1___Sc0000000	9857383	9857809	427	109	51	0.08256880733944955	-	UGUAAUCUUCCGGUUGGUCUAGUAAACC	14	4	98	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9878202-9878692	Cluster_154	Pocillopora_meandrina_HIv1___Sc0000000	9878202	9878692	491	1195	181	0.013389121338912133	-	UCCGUUCUGUAAUUGUUUCGAAUGCCUUC	155	1	1165	1	1	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9884246-9884668	Cluster_155	Pocillopora_meandrina_HIv1___Sc0000000	9884246	9884668	423	155	42	0.0	-	UGGGAAUAUCUGGUUCUUCGUGA	68	1	40	0	0	100	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9887131-9887541	Cluster_156	Pocillopora_meandrina_HIv1___Sc0000000	9887131	9887541	411	209	94	0.014354066985645933	-	UAAUAUGUGAUGAACUUA	43	65	140	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9889894-9890324	Cluster_157	Pocillopora_meandrina_HIv1___Sc0000000	9889894	9890324	431	126	9	0.05555555555555555	-	UCAGCUCCAUAUCUUGUUUAACAUCUUAAAC	85	0	123	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9898243-9898662	Cluster_158	Pocillopora_meandrina_HIv1___Sc0000000	9898243	9898662	420	167	69	0.12574850299401197	-	UUCGCGUCUGAAGCUGUUAG	40	72	11	20	29	32	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9904059-9904712	Cluster_159	Pocillopora_meandrina_HIv1___Sc0000000	9904059	9904712	654	547	132	0.7989031078610603	.	UGAAAAAAUCUUCUGUUAUAGACACCUGA	260	5	524	3	1	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9912448-9913768	Cluster_160	Pocillopora_meandrina_HIv1___Sc0000000	9912448	9913768	1321	1391	527	0.8511861969805895	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	65	12	1193	14	21	19	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9913963-9914383	Cluster_161	Pocillopora_meandrina_HIv1___Sc0000000	9913963	9914383	421	177	108	0.8870056497175142	+	UUGACGACUGUACGAAAGACAUCCUAAG	9	0	167	3	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9920126-9920554	Cluster_162	Pocillopora_meandrina_HIv1___Sc0000000	9920126	9920554	429	106	31	0.009433962264150943	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	64	2	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9924478-9925203	Cluster_163	Pocillopora_meandrina_HIv1___Sc0000000	9924478	9925203	726	471	175	0.08067940552016985	-	UUGGUGUGUUCAAGUAUCUUUGAUUCUGA	29	3	453	3	2	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9931068-9932750	Cluster_164	Pocillopora_meandrina_HIv1___Sc0000000	9931068	9932750	1683	2062	813	0.19641125121241512	-	UCUAACGCGUUUGUCUGACAUCCCUUU	147	41	1844	9	37	38	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9933736-9935597	Cluster_165	Pocillopora_meandrina_HIv1___Sc0000000	9933736	9935597	1862	18936	2801	0.9017215885086608	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3220	329	16719	201	120	272	1295	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10052621-10053049	Cluster_166	Pocillopora_meandrina_HIv1___Sc0000000	10052621	10053049	429	391	73	0.09974424552429667	-	UGUAAUCGCAUGUAGUUGCUUCUGUCUC	99	26	331	12	2	19	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10181668-10182095	Cluster_167	Pocillopora_meandrina_HIv1___Sc0000000	10181668	10182095	428	169	43	0.011834319526627219	-	UGGGUUGACUGAAUUUGUGAGGAAGCUG	28	0	155	0	0	13	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10361747-10362173	Cluster_168	Pocillopora_meandrina_HIv1___Sc0000000	10361747	10362173	427	177	72	0.9887005649717514	+	UACAAACAACAGAACGUUCGAACGGCU	31	3	168	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10377199-10381489	Cluster_169	Pocillopora_meandrina_HIv1___Sc0000000	10377199	10381489	4291	12709	3820	0.9232827130380046	+	UGACUCUUCAAUCUCUGAAACGACUGCUC	523	152	11713	61	64	258	461	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10424158-10424581	Cluster_170	Pocillopora_meandrina_HIv1___Sc0000000	10424158	10424581	424	109	13	1.0	+	UUAACUGGUAGUCAUGACGUCUCC	38	9	3	3	0	3	91	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10531083-10531487	Cluster_171	Pocillopora_meandrina_HIv1___Sc0000000	10531083	10531487	405	133	85	0.12030075187969924	-	UAGACGGUCUUCUAAAUGCUUGUGACUUAA	7	1	123	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10531936-10532626	Cluster_172	Pocillopora_meandrina_HIv1___Sc0000000	10531936	10532626	691	482	228	0.3112033195020747	.	UUUUCUACGAAUUCAUGCAUGCGUCGCU	24	3	423	2	3	16	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10532826-10533252	Cluster_173	Pocillopora_meandrina_HIv1___Sc0000000	10532826	10533252	427	131	76	0.10687022900763359	-	UGUAUUGAUUGAACUUGUCGGUUGACC	11	0	118	1	1	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10534041-10534763	Cluster_174	Pocillopora_meandrina_HIv1___Sc0000000	10534041	10534763	723	306	175	0.08496732026143791	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	23	1	293	0	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10540694-10541121	Cluster_175	Pocillopora_meandrina_HIv1___Sc0000000	10540694	10541121	428	82	24	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	1	79	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10543779-10544200	Cluster_176	Pocillopora_meandrina_HIv1___Sc0000000	10543779	10544200	422	212	127	0.8537735849056604	+	UACUGAUAGUGAAACUGCUCCUUGAACC	17	2	198	1	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10544222-10544652	Cluster_177	Pocillopora_meandrina_HIv1___Sc0000000	10544222	10544652	431	307	130	0.9706840390879479	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	18	2	296	0	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10553046-10553473	Cluster_178	Pocillopora_meandrina_HIv1___Sc0000000	10553046	10553473	428	172	39	0.005813953488372093	-	UGGGUUGACUGAAUUUGUGAGGAAGCUGA	31	1	154	1	1	15	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10685159-10685840	Cluster_179	Pocillopora_meandrina_HIv1___Sc0000000	10685159	10685840	682	844	193	0.011848341232227487	-	UGUACUGAACUCUACCAGCGAA	302	20	480	13	306	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10686623-10687051	Cluster_180	Pocillopora_meandrina_HIv1___Sc0000000	10686623	10687051	429	361	78	0.9224376731301939	+	CCGUGUCUUAAGAAACAAAGUUGU	92	4	193	0	1	19	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10707707-10708135	Cluster_181	Pocillopora_meandrina_HIv1___Sc0000000	10707707	10708135	429	266	52	0.011278195488721804	-	UCUAAUGCAGUGGCACAGAACCUCGGGGA	70	2	260	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10714526-10714941	Cluster_182	Pocillopora_meandrina_HIv1___Sc0000000	10714526	10714941	416	249	132	0.020080321285140562	-	UGGACAAGUCUGAUGGUGUAUUACCGAGUC	23	40	205	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10734393-10734819	Cluster_183	Pocillopora_meandrina_HIv1___Sc0000000	10734393	10734819	427	74	15	1.0	+	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	37	0	70	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10786268-10788448	Cluster_184	Pocillopora_meandrina_HIv1___Sc0000000	10786268	10788448	2181	3127	1005	0.9641829229293253	+	UGUACGCGUGGAUCAUCUUGUUGAGUG	141	45	2857	25	15	88	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10789452-10790491	Cluster_185	Pocillopora_meandrina_HIv1___Sc0000000	10789452	10790491	1040	853	375	0.9636576787807737	+	UAACAUCUCUCUUUCCGACUUUAACAGC	57	7	811	2	4	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10790631-10792237	Cluster_186	Pocillopora_meandrina_HIv1___Sc0000000	10790631	10792237	1607	1623	717	0.8841651263093038	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	81	20	1463	15	18	30	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10804971-10805394	Cluster_187	Pocillopora_meandrina_HIv1___Sc0000000	10804971	10805394	424	114	57	0.9912280701754386	+	UCAUUAGUCUGGACAUGCCCUGACAUCUCC	15	1	110	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10806848-10808466	Cluster_188	Pocillopora_meandrina_HIv1___Sc0000000	10806848	10808466	1619	4609	1092	0.8327185940551096	+	UGUGACUGUUAAAGAUACCUAGGAGUG	359	52	4035	21	20	159	322	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10811913-10812344	Cluster_189	Pocillopora_meandrina_HIv1___Sc0000000	10811913	10812344	432	335	170	0.5671641791044776	.	AUACACUAUAGGCGGUGACAAGCAACCAAC	23	4	313	0	3	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10812967-10813462	Cluster_190	Pocillopora_meandrina_HIv1___Sc0000000	10812967	10813462	496	6118	372	0.9932984635501798	+	UGAGACGAAACCCGACUACAGAAUAGCU	1518	17	5906	1	12	6	176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10856559-10857208	Cluster_191	Pocillopora_meandrina_HIv1___Sc0000000	10856559	10857208	650	1250	221	0.8008	+	UGCAUGACAAUUUUGGAGGAGAACCACCCA	430	30	1180	7	8	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10906504-10906934	Cluster_192	Pocillopora_meandrina_HIv1___Sc0000000	10906504	10906934	431	628	94	0.9904458598726115	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	214	6	615	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11008650-11009079	Cluster_193	Pocillopora_meandrina_HIv1___Sc0000000	11008650	11009079	430	323	31	1.0	+	UGACUGUGCUAAGUCAUUUGCUGCAAAUGA	142	1	311	1	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11039301-11039720	Cluster_194	Pocillopora_meandrina_HIv1___Sc0000000	11039301	11039720	420	172	5	1.0	+	AGAAGUGGAAAGAAAAUUUU	143	172	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11041565-11042739	Cluster_195	Pocillopora_meandrina_HIv1___Sc0000000	11041565	11042739	1175	911	374	0.9396267837541163	+	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	143	19	822	3	6	25	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11042954-11043457	Cluster_196	Pocillopora_meandrina_HIv1___Sc0000000	11042954	11043457	504	532	214	0.9360902255639098	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	62	4	505	6	0	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11043472-11043898	Cluster_197	Pocillopora_meandrina_HIv1___Sc0000000	11043472	11043898	427	214	110	0.8925233644859814	+	UGAACUUCUCGGCUCCAAACACUAUGG	60	4	198	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11043908-11044443	Cluster_198	Pocillopora_meandrina_HIv1___Sc0000000	11043908	11044443	536	424	232	0.8514150943396226	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	46	9	385	3	2	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11044450-11046447	Cluster_199	Pocillopora_meandrina_HIv1___Sc0000000	11044450	11046447	1998	4154	1431	0.8984111699566683	+	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	355	25	3875	20	40	46	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11067350-11068009	Cluster_200	Pocillopora_meandrina_HIv1___Sc0000000	11067350	11068009	660	237	122	0.9915611814345991	+	UAUCAAGUAGAGAUGUCUGAGCCCGAUG	17	4	228	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11068926-11069353	Cluster_201	Pocillopora_meandrina_HIv1___Sc0000000	11068926	11069353	428	224	96	0.9330357142857143	+	UGUUCUUGUAGUCUUUUAACAGCUUGUU	28	1	219	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11070468-11070894	Cluster_202	Pocillopora_meandrina_HIv1___Sc0000000	11070468	11070894	427	149	74	0.8456375838926175	+	UAGUGACCGUAUCUUAAACUCCCUAUUA	43	3	138	4	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11071238-11071734	Cluster_203	Pocillopora_meandrina_HIv1___Sc0000000	11071238	11071734	497	506	197	0.8972332015810277	+	UGAAAUAACUAAGUCCAGAAUAUUCUGAUU	26	3	479	0	2	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11077717-11078219	Cluster_204	Pocillopora_meandrina_HIv1___Sc0000000	11077717	11078219	503	231	91	0.9437229437229437	+	UGAAUAGUGUGUAUAUUGAAAGGUCUCGGUC	40	0	218	4	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11489850-11490268	Cluster_205	Pocillopora_meandrina_HIv1___Sc0000000	11489850	11490268	419	80	24	0.0	-	GACGGACUGGGAGAGCUCG	11	26	33	3	10	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11542819-11544140	Cluster_206	Pocillopora_meandrina_HIv1___Sc0000000	11542819	11544140	1322	1448	487	0.9129834254143646	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	105	13	1353	8	8	34	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11544360-11545815	Cluster_207	Pocillopora_meandrina_HIv1___Sc0000000	11544360	11545815	1456	1547	672	0.7407886231415644	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	94	18	1378	19	3	35	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11552655-11555295	Cluster_208	Pocillopora_meandrina_HIv1___Sc0000000	11552655	11555295	2641	8897	1833	0.9922445768236484	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1313	14	8728	13	21	38	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11557735-11558203	Cluster_209	Pocillopora_meandrina_HIv1___Sc0000000	11557735	11558203	469	232	85	0.9956896551724138	+	UUCAUAUCUAGUAUCAUUCUGAAAAUUAUU	21	0	225	1	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11558690-11559293	Cluster_210	Pocillopora_meandrina_HIv1___Sc0000000	11558690	11559293	604	559	172	0.9910554561717353	+	UGAUUGAAACUUGAAGAAGAGCUUGUAAC	64	7	548	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11559941-11560372	Cluster_211	Pocillopora_meandrina_HIv1___Sc0000000	11559941	11560372	432	495	118	0.9919191919191919	+	UGUAAUCUAGAUCUUUGCUUGUAUCGGCAC	95	2	487	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11561257-11561730	Cluster_212	Pocillopora_meandrina_HIv1___Sc0000000	11561257	11561730	474	542	217	0.9981549815498155	+	UCACACGUGCUUGAACUUGUCUUUUAAGGA	30	2	527	0	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11566070-11566661	Cluster_213	Pocillopora_meandrina_HIv1___Sc0000000	11566070	11566661	592	614	201	1.0	+	UAUUGUUUGCAAAAAGCUCUCUUGACUGC	85	3	589	2	2	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11566680-11567858	Cluster_214	Pocillopora_meandrina_HIv1___Sc0000000	11566680	11567858	1179	2987	556	0.9822564445932374	+	UAGAGCUCUUGUUUUUUCCACACCAAUA	423	15	2877	6	9	22	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11568056-11570378	Cluster_215	Pocillopora_meandrina_HIv1___Sc0000000	11568056	11570378	2323	43935	3295	0.9939456014566974	+	UGGAAACAUCUUCUCUGCCAAUUCCCAUU	2450	354	40712	134	602	1553	580	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11574178-11574789	Cluster_216	Pocillopora_meandrina_HIv1___Sc0000000	11574178	11574789	612	735	339	0.8965986394557823	+	UCAUCAUAGCUGUCUUUCUCUGCAGAGC	49	11	669	7	7	11	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11575547-11575948	Cluster_217	Pocillopora_meandrina_HIv1___Sc0000000	11575547	11575948	402	260	156	0.5346153846153846	.	UGCAUCGCGUUGGAAUUUUUAUUAGAGC	14	13	221	11	5	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11576454-11577454	Cluster_218	Pocillopora_meandrina_HIv1___Sc0000000	11576454	11577454	1001	1241	549	0.3577759871071716	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	68	16	1111	5	13	30	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11580662-11581090	Cluster_219	Pocillopora_meandrina_HIv1___Sc0000000	11580662	11581090	429	183	36	1.0	+	UGAGAAGUACAAGCUAUAGAGGACUGUUG	62	5	177	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11583909-11584334	Cluster_220	Pocillopora_meandrina_HIv1___Sc0000000	11583909	11584334	426	83	32	1.0	+	UUUAUCCCAACUGGUUACAGGACAUCC	20	0	82	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11584630-11585077	Cluster_221	Pocillopora_meandrina_HIv1___Sc0000000	11584630	11585077	448	383	120	1.0	+	UGGGUGUUGUUCCUGACUCCAAGGGAAGUG	54	2	367	1	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11587332-11587855	Cluster_222	Pocillopora_meandrina_HIv1___Sc0000000	11587332	11587855	524	573	287	0.9284467713787086	+	UUGGAACUUCAGCUGUGAGACGCAGGU	23	6	516	4	4	25	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11588495-11588921	Cluster_223	Pocillopora_meandrina_HIv1___Sc0000000	11588495	11588921	427	343	185	0.9854227405247813	+	UCGCUUCCAAAGGCUUGUGGUCAGAUU	18	1	316	1	9	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11589851-11590275	Cluster_224	Pocillopora_meandrina_HIv1___Sc0000000	11589851	11590275	425	205	91	0.9512195121951219	+	UACGAUCAGGAUUGUCCACCACACAGA	45	1	187	2	1	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11590452-11591141	Cluster_225	Pocillopora_meandrina_HIv1___Sc0000000	11590452	11591141	690	1245	483	0.963855421686747	+	UGGGAUGUUUAUCGGGAUUUGUACCAGAU	45	11	1159	6	4	11	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11594639-11595518	Cluster_226	Pocillopora_meandrina_HIv1___Sc0000000	11594639	11595518	880	4236	468	0.9936260623229461	+	UCUUCAUUAGGCUUACUGAACUUGACGA	617	19	4147	3	13	14	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11597439-11597857	Cluster_227	Pocillopora_meandrina_HIv1___Sc0000000	11597439	11597857	419	225	114	1.0	+	UACAUAGUGUUCUGUUCCCUUUAUAGGAC	14	0	223	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11610279-11610705	Cluster_228	Pocillopora_meandrina_HIv1___Sc0000000	11610279	11610705	427	223	49	1.0	+	UGUUUGUAGGGGCCGAAUGUUUGUGCU	36	0	218	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11611076-11611579	Cluster_229	Pocillopora_meandrina_HIv1___Sc0000000	11611076	11611579	504	647	111	0.9984544049459042	+	UUCCUGUACUGAUUUCCUCAUGUCUUCUGC	141	4	638	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11612226-11612654	Cluster_230	Pocillopora_meandrina_HIv1___Sc0000000	11612226	11612654	429	271	70	0.992619926199262	+	UUCAACACAUUUUCUUAGUAGUUCUGGGU	88	2	260	0	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11615893-11616321	Cluster_231	Pocillopora_meandrina_HIv1___Sc0000000	11615893	11616321	429	273	117	0.0989010989010989	-	UGUGUACUUACCAUAGCCUCGCUCUGGA	51	8	255	5	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11619882-11620712	Cluster_232	Pocillopora_meandrina_HIv1___Sc0000000	11619882	11620712	831	5612	878	0.900392017106201	+	UAUUCUCUUCUUUGAUAAUGACUUUGA	899	22	5243	31	41	153	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11630399-11631228	Cluster_233	Pocillopora_meandrina_HIv1___Sc0000000	11630399	11631228	830	770	304	0.9051948051948052	+	UGUGUACUUACCAUAGCCUCGCUCUGGA	66	13	723	14	4	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11635028-11636324	Cluster_234	Pocillopora_meandrina_HIv1___Sc0000000	11635028	11636324	1297	6293	1117	0.9119656761481011	+	UGUUGUGCUUUUUGUUUGUCUUUGAAAA	835	35	5953	16	36	39	214	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11790561-11790980	Cluster_235	Pocillopora_meandrina_HIv1___Sc0000000	11790561	11790980	420	169	81	0.28994082840236685	.	GCUAAGAGGACGGGAACAUCAUUUC	14	4	146	3	8	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11794303-11794869	Cluster_236	Pocillopora_meandrina_HIv1___Sc0000000	11794303	11794869	567	921	384	0.1748099891422367	-	UAAUUUCGUGUUGCUUAAGCUGUUGAUC	91	73	748	48	13	19	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11798273-11798686	Cluster_237	Pocillopora_meandrina_HIv1___Sc0000000	11798273	11798686	414	124	51	0.008064516129032258	-	UGCUACAGAAGUAGAUUGUGUAAUCUGAGC	35	2	118	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11804184-11804611	Cluster_238	Pocillopora_meandrina_HIv1___Sc0000000	11804184	11804611	428	185	86	0.005405405405405406	-	UGAGAUUGAUUGCCUCUGUGGUGUGGAU	31	1	180	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11812161-11812606	Cluster_239	Pocillopora_meandrina_HIv1___Sc0000000	11812161	11812606	446	245	70	0.0	-	UGAAUUCUGUCACGAGUAUUAGACUCCAC	70	0	245	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11813263-11815282	Cluster_240	Pocillopora_meandrina_HIv1___Sc0000000	11813263	11815282	2020	4314	1227	0.1923968474733426	-	UGAUACGAGUAGUUGGAUACAAUCUAAACU	317	96	3904	27	30	68	189	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11816999-11818265	Cluster_241	Pocillopora_meandrina_HIv1___Sc0000000	11816999	11818265	1267	1466	556	0.7871759890859482	.	UGUAACUGGUUCACUGCGAUUUUGUAGU	98	17	1282	10	10	57	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11818269-11818788	Cluster_242	Pocillopora_meandrina_HIv1___Sc0000000	11818269	11818788	520	903	252	0.8017718715393134	+	UGAUAUGACCUUCGGCAAAAAACUGGAAAGC	83	2	796	3	3	24	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11819697-11820119	Cluster_243	Pocillopora_meandrina_HIv1___Sc0000000	11819697	11820119	423	193	87	0.0	-	UGCAAUUCCAGUAGCUUGAGAUUUUCUGA	16	2	187	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11820158-11820585	Cluster_244	Pocillopora_meandrina_HIv1___Sc0000000	11820158	11820585	428	172	82	0.0	-	UGACUUAGCUCGCUGGCAGGAAGAGAUA	16	0	164	1	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11822367-11824210	Cluster_245	Pocillopora_meandrina_HIv1___Sc0000000	11822367	11824210	1844	18386	2647	0.10165343195909932	-	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3284	318	16252	207	76	228	1305	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11825210-11826912	Cluster_246	Pocillopora_meandrina_HIv1___Sc0000000	11825210	11826912	1703	2062	824	0.8191076624636275	+	UCUAACGCGUUUGUCUGACAUCCCUUU	149	36	1840	16	52	32	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11828733-11829527	Cluster_247	Pocillopora_meandrina_HIv1___Sc0000000	11828733	11829527	795	603	264	0.11940298507462686	-	UUAUCCUUUAGUUUCGAGUCUGGCAAUU	37	8	559	6	5	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11851345-11852170	Cluster_248	Pocillopora_meandrina_HIv1___Sc0000000	11851345	11852170	826	1955	355	0.09872122762148337	-	UAAUGUGAAUUUUUGGAUCAUUGGUUGUG	168	4	1915	3	11	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11859861-11860838	Cluster_249	Pocillopora_meandrina_HIv1___Sc0000000	11859861	11860838	978	2918	380	0.004455106237148732	-	UCUUUCUCUUCUCGUAGAGACGUGACGU	916	34	2817	19	16	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11860889-11861894	Cluster_250	Pocillopora_meandrina_HIv1___Sc0000000	11860889	11861894	1006	4416	567	0.019021739130434784	-	UAAGACAAGCUAUCAUUCCUGCAUUA	947	25	4188	9	69	39	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11862228-11862803	Cluster_251	Pocillopora_meandrina_HIv1___Sc0000000	11862228	11862803	576	1014	169	0.08678500986193294	-	UGCAUGUCAUACUUUCUAACAAAGA	164	12	886	14	22	34	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11864343-11866061	Cluster_252	Pocillopora_meandrina_HIv1___Sc0000000	11864343	11866061	1719	7285	1551	0.03678792038435141	-	UCAAUAUAUCUUCUUCAAGUAUUCUGGA	585	121	6460	114	230	146	214	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11866698-11867901	Cluster_253	Pocillopora_meandrina_HIv1___Sc0000000	11866698	11867901	1204	68006	1530	0.025850660235861543	-	UCCCGAUCGUUGUUAAAGUCUUAGAAACCUU	13150	216	66410	203	571	263	343	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11869195-11869664	Cluster_254	Pocillopora_meandrina_HIv1___Sc0000000	11869195	11869664	470	479	170	0.0041753653444676405	-	UACAAAGCUCUCACGAAUUCACAAACAGA	54	1	475	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11870083-11871218	Cluster_255	Pocillopora_meandrina_HIv1___Sc0000000	11870083	11871218	1136	1893	694	0.012150026413100899	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	78	57	1770	22	8	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11871339-11872217	Cluster_256	Pocillopora_meandrina_HIv1___Sc0000000	11871339	11872217	879	949	375	0.005268703898840885	-	UUAACGACUGGAUUCUUUCAUCUGCUUUC	60	1	902	3	9	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11872390-11873076	Cluster_257	Pocillopora_meandrina_HIv1___Sc0000000	11872390	11873076	687	1002	358	0.00499001996007984	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	98	9	982	2	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11879278-11880568	Cluster_258	Pocillopora_meandrina_HIv1___Sc0000000	11879278	11880568	1291	39621	2838	0.02067085636404937	-	UUUGUAGGCUCUAACAGU	14384	19662	18677	198	266	372	446	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11880663-11881090	Cluster_259	Pocillopora_meandrina_HIv1___Sc0000000	11880663	11881090	428	1237	178	0.025060630557801132	-	UAGUAUCUGAAGUCUUUGUAACACA	428	3	1204	1	10	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11882086-11882516	Cluster_260	Pocillopora_meandrina_HIv1___Sc0000000	11882086	11882516	431	369	175	0.0027100271002710027	-	UAUUCCAAUCGUCAGGAAUUUUCCUUCUGUC	30	1	359	2	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11882808-11883388	Cluster_261	Pocillopora_meandrina_HIv1___Sc0000000	11882808	11883388	581	546	254	0.020146520146520148	-	UACGAGCACUAUAGGUGGAAGAACGCCAU	19	4	515	9	1	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11884724-11885487	Cluster_262	Pocillopora_meandrina_HIv1___Sc0000000	11884724	11885487	764	671	217	0.05812220566318927	-	UAAUCCCAGGUCUUGUAUCGUAAUACUUCA	132	2	662	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11887649-11888834	Cluster_263	Pocillopora_meandrina_HIv1___Sc0000000	11887649	11888834	1186	2763	786	0.06731813246471227	-	UGUGUAACUUUGAACCUUUCCUUUUGCU	134	15	2613	12	28	35	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11894480-11895204	Cluster_264	Pocillopora_meandrina_HIv1___Sc0000000	11894480	11895204	725	1801	364	0.10438645197112716	-	UGAUAUGAAAGAUUACUUCGACUGAAA	155	122	1579	10	27	31	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11895337-11896747	Cluster_265	Pocillopora_meandrina_HIv1___Sc0000000	11895337	11896747	1411	2572	944	0.18662519440124417	-	UGCAUCGAUUUCCGCUUUGAACUUGUUC	94	34	2247	32	59	64	136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11896757-11897212	Cluster_266	Pocillopora_meandrina_HIv1___Sc0000000	11896757	11897212	456	421	193	0.07125890736342043	-	UAGGUUUGUCUUCGAGUCCUAGGACGU	37	5	392	2	4	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11897487-11898266	Cluster_267	Pocillopora_meandrina_HIv1___Sc0000000	11897487	11898266	780	712	226	0.0351123595505618	-	UAUGCUAUUAUUCUGUUUCCGACACACU	96	11	684	6	3	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11902264-11902850	Cluster_268	Pocillopora_meandrina_HIv1___Sc0000000	11902264	11902850	587	1416	343	0.009887005649717515	-	UGGUGUAAUUGUUUCUUCUGGAAACUC	105	99	1009	65	116	67	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12107675-12108090	Cluster_269	Pocillopora_meandrina_HIv1___Sc0000000	12107675	12108090	416	219	104	0.3607305936073059	.	UGGGCAAACUCCUUGGGCAUGUUUUU	14	7	173	4	2	19	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12327275-12327687	Cluster_270	Pocillopora_meandrina_HIv1___Sc0000000	12327275	12327687	413	130	95	0.023076923076923078	-	AAGGUUGUGGGUUCGAGUCC	7	59	35	21	6	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12448981-12450060	Cluster_271	Pocillopora_meandrina_HIv1___Sc0000000	12448981	12450060	1080	1765	241	0.49575070821529743	.	UGGUUUCAAGACUUCAAGAA	556	651	669	7	23	92	323	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12682298-12682725	Cluster_272	Pocillopora_meandrina_HIv1___Sc0000000	12682298	12682725	428	193	67	0.9948186528497409	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	34	3	186	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12684019-12684448	Cluster_273	Pocillopora_meandrina_HIv1___Sc0000000	12684019	12684448	430	98	29	0.9285714285714286	+	UGAACUUGAACUAUUUGCUGGAGACGAAAG	36	0	91	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12687759-12688641	Cluster_274	Pocillopora_meandrina_HIv1___Sc0000000	12687759	12688641	883	535	203	0.9644859813084112	+	UGGAUUAUCAACUUUCAAUCGCGAGUUAGC	82	22	476	10	5	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12688689-12689097	Cluster_275	Pocillopora_meandrina_HIv1___Sc0000000	12688689	12689097	409	119	63	0.9915966386554622	+	CGAAUCUGGAUUGGCUGAGGCUUUGCA	14	8	101	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12691009-12691534	Cluster_276	Pocillopora_meandrina_HIv1___Sc0000000	12691009	12691534	526	440	163	0.9977272727272727	+	AACAGUGAAGUGCGAAUCUCUAAUGAUCUU	89	9	407	3	10	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12762833-12763259	Cluster_277	Pocillopora_meandrina_HIv1___Sc0000000	12762833	12763259	427	332	38	0.012048192771084338	-	UGAAACUCUGAUCUGAAAAUAUUUGUC	233	2	330	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12777775-12778197	Cluster_278	Pocillopora_meandrina_HIv1___Sc0000000	12777775	12778197	423	176	57	0.18181818181818182	-	AAUCUCUUUAAGCAUGGACCUGG	58	2	42	5	0	82	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12951425-12951935	Cluster_279	Pocillopora_meandrina_HIv1___Sc0000000	12951425	12951935	511	731	232	0.11627906976744186	-	UCCGUCUGAUAGAUAUCCAUGAAAUGUC	159	37	664	3	2	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13015507-13015928	Cluster_280	Pocillopora_meandrina_HIv1___Sc0000000	13015507	13015928	422	90	9	1.0	+	UCUGACGAAGGGCUGACGCUCA	78	0	1	0	84	1	4	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13269363-13269787	Cluster_281	Pocillopora_meandrina_HIv1___Sc0000000	13269363	13269787	425	156	29	0.9935897435897436	+	UACCGUAGAACUUUCCAGAACAUU	52	3	83	0	0	3	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13278878-13279297	Cluster_282	Pocillopora_meandrina_HIv1___Sc0000000	13278878	13279297	420	265	153	0.9735849056603774	+	UUAUUCAUUUUACUUCUCCUUC	11	85	73	37	38	21	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13335663-13336113	Cluster_283	Pocillopora_meandrina_HIv1___Sc0000000	13335663	13336113	451	635	162	0.9968503937007874	+	CUUGUAAUUGGAAUGAGUA	133	390	54	110	35	24	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13337548-13338139	Cluster_284	Pocillopora_meandrina_HIv1___Sc0000000	13337548	13338139	592	476	258	1.0	+	GAAGUCUGUACUGAAAGGUGU	21	105	209	59	45	34	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13607264-13607690	Cluster_285	Pocillopora_meandrina_HIv1___Sc0000000	13607264	13607690	427	119	24	0.9915966386554622	+	UCGUUUAGAUCAGAGAUCACCUCAACU	58	0	115	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13714447-13714873	Cluster_286	Pocillopora_meandrina_HIv1___Sc0000000	13714447	13714873	427	374	32	0.9866310160427807	+	UCGUUUAGAUCAGAGAUCACCUCAACU	195	0	373	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13752128-13752978	Cluster_287	Pocillopora_meandrina_HIv1___Sc0000000	13752128	13752978	851	1552	517	0.1095360824742268	-	UGAUUUAUAGGAGUAAUGAGACAUUAU	147	18	1433	17	26	11	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13753534-13755105	Cluster_288	Pocillopora_meandrina_HIv1___Sc0000000	13753534	13755105	1572	2302	981	0.07211120764552563	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	90	17	2115	7	14	87	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13777450-13777874	Cluster_289	Pocillopora_meandrina_HIv1___Sc0000000	13777450	13777874	425	225	50	0.9911111111111112	+	CGCGGAAAGAGGGGAAAUUGCACU	36	40	106	5	9	3	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13793624-13794060	Cluster_290	Pocillopora_meandrina_HIv1___Sc0000000	13793624	13794060	437	535	143	0.9775700934579439	+	UGCGAAAGAAACAGGGAAAGUUUGACGAUG	56	5	448	5	13	36	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13795205-13795634	Cluster_291	Pocillopora_meandrina_HIv1___Sc0000000	13795205	13795634	430	2403	26	0.0004161464835622139	-	UACCAAGGUCUUGUAGUCUAGUACAACU	1383	2	2399	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13888862-13889287	Cluster_292	Pocillopora_meandrina_HIv1___Sc0000000	13888862	13889287	426	93	35	0.978494623655914	+	UGUGUAGAUAUGUCUUUUGGACAGGA	32	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13932415-13932825	Cluster_293	Pocillopora_meandrina_HIv1___Sc0000000	13932415	13932825	411	97	47	1.0	+	UGACGAUUUUCGCGGCUCGAUUUUGUA	8	0	95	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14041334-14042282	Cluster_294	Pocillopora_meandrina_HIv1___Sc0000000	14041334	14042282	949	2221	732	0.08869878433138226	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	186	14	2086	6	18	24	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14042286-14043154	Cluster_295	Pocillopora_meandrina_HIv1___Sc0000000	14042286	14043154	869	532	256	0.07706766917293233	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	28	4	504	5	2	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14043355-14045670	Cluster_296	Pocillopora_meandrina_HIv1___Sc0000000	14043355	14045670	2316	4366	1316	0.14429683921209344	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	206	66	3772	31	35	168	294	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14069210-14069627	Cluster_297	Pocillopora_meandrina_HIv1___Sc0000000	14069210	14069627	418	108	53	1.0	+	UGACGAUUUUCGCGGCUCGAUUUUGU	13	0	107	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14113713-14114127	Cluster_298	Pocillopora_meandrina_HIv1___Sc0000000	14113713	14114127	415	75	20	0.92	+	UACCAACGUAAUAAAAGUAGAUGACGUG	23	0	72	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14199236-14199664	Cluster_299	Pocillopora_meandrina_HIv1___Sc0000000	14199236	14199664	429	291	31	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	204	0	291	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14564110-14564538	Cluster_300	Pocillopora_meandrina_HIv1___Sc0000000	14564110	14564538	429	287	20	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	199	0	287	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14751018-14751456	Cluster_301	Pocillopora_meandrina_HIv1___Sc0000000	14751018	14751456	439	382	171	0.9136125654450262	+	UCAGAUGGUUGAUAACUGCAGAUGACGU	34	5	352	1	2	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14751995-14752696	Cluster_302	Pocillopora_meandrina_HIv1___Sc0000000	14751995	14752696	702	290	131	0.9655172413793104	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	41	6	278	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14753923-14754354	Cluster_303	Pocillopora_meandrina_HIv1___Sc0000000	14753923	14754354	432	255	147	0.8352941176470589	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	19	2	228	1	3	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14917731-14918157	Cluster_304	Pocillopora_meandrina_HIv1___Sc0000000	14917731	14918157	427	164	75	0.0	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	16	3	153	0	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15297104-15297532	Cluster_305	Pocillopora_meandrina_HIv1___Sc0000000	15297104	15297532	429	163	38	0.1901840490797546	-	UCUCUCUCGGUAUAGCUUUCAAAACAGUC	61	3	125	0	3	31	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15361997-15362422	Cluster_306	Pocillopora_meandrina_HIv1___Sc0000000	15361997	15362422	426	307	76	0.0	-	CCUCUAUGAUGAUUACCUUAACAC	35	101	94	18	19	32	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15365853-15366280	Cluster_307	Pocillopora_meandrina_HIv1___Sc0000000	15365853	15366280	428	158	84	0.0	-	CAUUUCUCUCUGAAGGGC	10	55	84	9	4	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15682027-15682444	Cluster_308	Pocillopora_meandrina_HIv1___Sc0000000	15682027	15682444	418	197	3	1.0	+	AAAUCCCACCUGGAUUUU	162	197	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15838639-15839444	Cluster_309	Pocillopora_meandrina_HIv1___Sc0000000	15838639	15839444	806	1252	245	0.24121405750798722	.	UGAUUGAGUCAAAGACAAUGUGGGAGUC	345	8	1155	6	7	53	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15877485-15877913	Cluster_310	Pocillopora_meandrina_HIv1___Sc0000000	15877485	15877913	429	235	11	0.9914893617021276	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	205	0	235	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16151379-16151857	Cluster_311	Pocillopora_meandrina_HIv1___Sc0000000	16151379	16151857	479	368	203	0.0	-	AAGAACCAUCUGCAUCAGACAU	12	52	136	44	50	51	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16197870-16198683	Cluster_312	Pocillopora_meandrina_HIv1___Sc0000000	16197870	16198683	814	17179	393	0.999708946970138	+	UAUGAUAUCAUAGCCUUUGAGA	8511	1452	826	1648	11037	1190	1026	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16218376-16218794	Cluster_313	Pocillopora_meandrina_HIv1___Sc0000000	16218376	16218794	419	1471	28	0.0	-	GACUUGAAGCGGUUGGAA	1271	1468	1	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16370090-16370544	Cluster_314	Pocillopora_meandrina_HIv1___Sc0000000	16370090	16370544	455	1833	130	0.9918166939443536	+	AGCUCAUUCAGGACAGUCCAGCGAACUAUC	723	37	1705	16	53	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16388395-16388993	Cluster_315	Pocillopora_meandrina_HIv1___Sc0000000	16388395	16388993	599	1877	179	0.996803409696324	+	AGCUCAUUCAGGACAGUCCAGCGAACUAUC	745	35	1770	11	35	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16449057-16449477	Cluster_316	Pocillopora_meandrina_HIv1___Sc0000000	16449057	16449477	421	125	75	0.0	-	AAAGACUGGCAGCAUUGUGGACGUUGUU	9	19	83	12	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16450615-16451050	Cluster_317	Pocillopora_meandrina_HIv1___Sc0000000	16450615	16451050	436	321	232	0.003115264797507788	-	GAAAAGAUCUGCAGAUGAAGAGAAAGAUGA	7	32	240	15	11	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16480301-16481760	Cluster_318	Pocillopora_meandrina_HIv1___Sc0000000	16480301	16481760	1460	2666	1041	0.3124531132783196	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	109	38	2199	57	17	135	220	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16481861-16482707	Cluster_319	Pocillopora_meandrina_HIv1___Sc0000000	16481861	16482707	847	7007	820	0.054231482802911374	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	1483	24	6683	27	15	153	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16482875-16483301	Cluster_320	Pocillopora_meandrina_HIv1___Sc0000000	16482875	16483301	427	224	128	0.13392857142857142	-	UGAGUCGAGGUUAUUCACAAUACGAGC	33	3	197	2	3	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16918087-16918514	Cluster_321	Pocillopora_meandrina_HIv1___Sc0000000	16918087	16918514	428	204	59	0.0	-	GCUAUAGACUGCUCUUUGAUCCAAACACAU	37	12	118	8	14	12	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17062895-17064293	Cluster_322	Pocillopora_meandrina_HIv1___Sc0000000	17062895	17064293	1399	1480	566	0.904054054054054	+	UGAGAAUGUUUAGCCCGAGAUACGCUGA	70	36	1289	59	17	41	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17091980-17092429	Cluster_323	Pocillopora_meandrina_HIv1___Sc0000000	17091980	17092429	450	207	88	0.00966183574879227	-	UCGAAUCCCACCGCUGCCACCA	16	100	13	34	37	15	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17582770-17583201	Cluster_324	Pocillopora_meandrina_HIv1___Sc0000000	17582770	17583201	432	481	49	0.0	-	UGAUCUCUGUUAUACCCUCUUGGGUAGUGU	179	1	478	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17858000-17858429	Cluster_325	Pocillopora_meandrina_HIv1___Sc0000000	17858000	17858429	430	183	65	1.0	+	UAUCCGGUUGUAACGCUAGACAGUCACGCU	34	1	181	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17927790-17928217	Cluster_326	Pocillopora_meandrina_HIv1___Sc0000000	17927790	17928217	428	116	6	0.0	-	GUGAAUGAUGACAAGAAACAAACUGAUC	96	0	113	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18139302-18139735	Cluster_327	Pocillopora_meandrina_HIv1___Sc0000000	18139302	18139735	434	287	96	0.9790940766550522	+	UGUAAGACUGACGAAGGCUAAGGUGAACAGC	26	9	258	1	1	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18537549-18537976	Cluster_328	Pocillopora_meandrina_HIv1___Sc0000000	18537549	18537976	428	82	18	1.0	+	UUUCAGCAGAGGACAAUGAUUCAAAAGAUG	44	1	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18555063-18555627	Cluster_329	Pocillopora_meandrina_HIv1___Sc0000000	18555063	18555627	565	698	171	0.7593123209169055	.	UCGAAACGCAUCCAUUUUGGCCAUACA	91	16	594	9	4	40	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18562801-18563455	Cluster_330	Pocillopora_meandrina_HIv1___Sc0000000	18562801	18563455	655	623	292	0.19903691813804172	-	UGUGUCAGAUGCGUUUCAGAAAUGGUU	110	3	569	8	2	15	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18563593-18564155	Cluster_331	Pocillopora_meandrina_HIv1___Sc0000000	18563593	18564155	563	848	288	0.1214622641509434	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	91	4	788	1	6	24	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18564393-18564819	Cluster_332	Pocillopora_meandrina_HIv1___Sc0000000	18564393	18564819	427	215	126	0.14883720930232558	-	UGAGUCGAGGUUAUUCACAAUACGAGC	38	4	182	1	3	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18585347-18586585	Cluster_333	Pocillopora_meandrina_HIv1___Sc0000000	18585347	18586585	1239	1272	473	0.27437106918238996	.	UUGGAUAAUUUUGACGAAACCAGAGACA	155	13	1167	5	18	33	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18586632-18588144	Cluster_334	Pocillopora_meandrina_HIv1___Sc0000000	18586632	18588144	1513	1378	436	0.6015965166908563	.	AGCAUACUCGAAGAACUGCAAGUUAAUGGA	116	44	1274	5	13	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18589062-18589489	Cluster_335	Pocillopora_meandrina_HIv1___Sc0000000	18589062	18589489	428	389	79	0.033419023136246784	-	UGUGUUCGUUGAAUGGCUCCCCAUGCG	101	2	382	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19104877-19106198	Cluster_336	Pocillopora_meandrina_HIv1___Sc0000000	19104877	19106198	1322	1460	486	0.9212328767123288	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	100	7	1387	3	5	33	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19106418-19107082	Cluster_337	Pocillopora_meandrina_HIv1___Sc0000000	19106418	19107082	665	638	286	0.6238244514106583	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	30	3	572	2	8	19	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19107220-19107874	Cluster_338	Pocillopora_meandrina_HIv1___Sc0000000	19107220	19107874	655	632	311	0.8022151898734177	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	101	9	573	6	1	13	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19172834-19173259	Cluster_339	Pocillopora_meandrina_HIv1___Sc0000000	19172834	19173259	426	166	114	0.08433734939759036	-	CUUGAGUCAAACAAGCGUGCACUGAAUA	12	24	127	5	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19548879-19549664	Cluster_340	Pocillopora_meandrina_HIv1___Sc0000000	19548879	19549664	786	3462	426	0.23714615829000577	.	UUCGAAGAAACUCUUGCCAUCGCCUGGA	812	29	3207	8	19	47	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19550612-19551039	Cluster_341	Pocillopora_meandrina_HIv1___Sc0000000	19550612	19551039	428	102	6	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	65	0	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19551967-19552391	Cluster_342	Pocillopora_meandrina_HIv1___Sc0000000	19551967	19552391	425	136	73	0.19852941176470587	-	UGUUGCAAAGCUCUUCGUCCAAAAGA	12	9	110	5	1	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19670489-19670916	Cluster_343	Pocillopora_meandrina_HIv1___Sc0000000	19670489	19670916	428	131	54	0.24427480916030533	.	UGUUUGAUCCAAUUCAGGAUACUUUGGC	25	8	104	0	2	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19726198-19726623	Cluster_344	Pocillopora_meandrina_HIv1___Sc0000000	19726198	19726623	426	188	90	0.75	.	CUUUCUGAUGUAAUACGCUC	16	127	3	42	12	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19758301-19758726	Cluster_345	Pocillopora_meandrina_HIv1___Sc0000000	19758301	19758726	426	181	77	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	20	3	172	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19791285-19791992	Cluster_346	Pocillopora_meandrina_HIv1___Sc0000000	19791285	19791992	708	614	99	0.5130293159609121	.	UCCGGCUCGAAGGACCAU	146	305	248	30	3	28	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19799557-19800086	Cluster_347	Pocillopora_meandrina_HIv1___Sc0000000	19799557	19800086	530	3001	759	0.0	-	AGGAAGAAUGAGACACUCUGAUUGCU	69	467	1812	189	249	145	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19800614-19801084	Cluster_348	Pocillopora_meandrina_HIv1___Sc0000000	19800614	19801084	471	2492	354	0.0	-	GUCAAUGAUGAUUGUGUGAUUCCCCUUCA	479	79	1857	81	58	79	338	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19802252-19802723	Cluster_349	Pocillopora_meandrina_HIv1___Sc0000000	19802252	19802723	472	1507	188	0.008626410086264101	-	UGGAAAUGAUGUUACUCCGUGU	357	190	565	147	383	137	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19809696-19810174	Cluster_350	Pocillopora_meandrina_HIv1___Sc0000000	19809696	19810174	479	580	194	0.0	-	CACCUUUGAUGAUAUUUAUCC	41	165	208	74	45	27	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19813053-19813480	Cluster_351	Pocillopora_meandrina_HIv1___Sc0000000	19813053	19813480	428	355	235	0.0	-	GAUCCGUGGAGCUAAGGACAAGAAGCU	8	88	159	22	28	24	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19813596-19814046	Cluster_352	Pocillopora_meandrina_HIv1___Sc0000000	19813596	19814046	451	235	150	0.0	-	CAGAUCCACAGGAUCCGUAUCACUCU	12	89	81	14	17	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19856455-19856872	Cluster_353	Pocillopora_meandrina_HIv1___Sc0000000	19856455	19856872	418	149	35	0.9865771812080537	+	ACCGAGGAGGAAAGACUG	68	131	10	1	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19934098-19934520	Cluster_354	Pocillopora_meandrina_HIv1___Sc0000000	19934098	19934520	423	6849	173	0.9964958388085852	+	GUAGUCGUGGCCGAGUGG	3678	6691	23	61	20	23	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19970946-19971368	Cluster_355	Pocillopora_meandrina_HIv1___Sc0000000	19970946	19971368	423	177	82	0.0	-	AAUUAUGAUGAGAACUAUACUUCAAGGU	17	17	99	27	12	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19971632-19972106	Cluster_356	Pocillopora_meandrina_HIv1___Sc0000000	19971632	19972106	475	15879	912	0.0	-	CUGUGAUAAAACUUGAAGUUCUGAGC	2051	4083	7452	1067	1071	629	1577	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19974441-19974974	Cluster_357	Pocillopora_meandrina_HIv1___Sc0000000	19974441	19974974	534	632	311	0.0	-	UUCAGUGGUUCCUGUCGAGAGGUACAUA	20	168	309	56	21	33	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19977738-19978273	Cluster_358	Pocillopora_meandrina_HIv1___Sc0000000	19977738	19978273	536	985	297	0.0040609137055837565	-	AUGGCCAUUUGCUUGUUCCCUGA	92	187	370	75	99	203	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20051814-20052242	Cluster_359	Pocillopora_meandrina_HIv1___Sc0000000	20051814	20052242	429	279	37	0.0	-	GAGUAAAUCACGAGAGAAAGACAAGGACA	121	1	272	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20238800-20239217	Cluster_360	Pocillopora_meandrina_HIv1___Sc0000000	20238800	20239217	418	339	66	0.008849557522123894	-	AUCCGGCUCGAAGGACCA	170	233	103	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20372416-20372510	Cluster_361	Pocillopora_meandrina_HIv1___Sc0000000	20372416	20372510	95	522228	378	0.0	-	UCAAGUCUAGGCUGGUUAGUUU	361684	1294	19	20216	498308	2255	136	22	Y	spi-mir-temp-15_Stylophora_pistillata_Liew_et_al._2014_NA;spi-miR-L-temp-15_Stylophora_pistillata_Praher_et_al._2021_NA
Pocillopora_meandrina_HIv1___Sc0000000:20455492-20455956	Cluster_362	Pocillopora_meandrina_HIv1___Sc0000000	20455492	20455956	465	305	151	0.003278688524590164	-	UGGUCUAAGGCGCUGGUUUU	14	168	40	17	33	32	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20487173-20487823	Cluster_363	Pocillopora_meandrina_HIv1___Sc0000000	20487173	20487823	651	2189	849	0.9428962996802193	+	CAAUUCAGACUACUCUUUGUCCAACCCAA	86	574	671	306	320	114	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20534016-20535106	Cluster_364	Pocillopora_meandrina_HIv1___Sc0000000	20534016	20535106	1091	3916	1691	0.44050051072522983	.	UCUGGCGUAUAACUGUUCACC	95	2032	75	1125	541	112	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20554497-20554926	Cluster_365	Pocillopora_meandrina_HIv1___Sc0000000	20554497	20554926	430	359	79	0.011142061281337047	-	GCCCGACUAGCUCAGUCGGUAGAGCAUGA	146	23	321	8	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20557163-20557593	Cluster_366	Pocillopora_meandrina_HIv1___Sc0000000	20557163	20557593	431	5672	303	1.0	+	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	2619	112	5529	4	9	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20559748-20560165	Cluster_367	Pocillopora_meandrina_HIv1___Sc0000000	20559748	20560165	418	345	19	1.0	+	CUCAGUCGGUAGAGCAUA	278	345	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20665499-20665929	Cluster_368	Pocillopora_meandrina_HIv1___Sc0000000	20665499	20665929	431	353	65	0.0	-	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	169	8	343	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20681229-20681643	Cluster_369	Pocillopora_meandrina_HIv1___Sc0000000	20681229	20681643	415	143	71	0.993006993006993	+	GCUGCCGGUCGUUGGGGG	28	85	40	9	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20703269-20703749	Cluster_370	Pocillopora_meandrina_HIv1___Sc0000000	20703269	20703749	481	2815	487	0.002486678507992895	-	GCGCGGAUGAGCCUCACUGGUGUGGGGU	264	998	1333	168	122	121	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21034486-21034968	Cluster_371	Pocillopora_meandrina_HIv1___Sc0000000	21034486	21034968	483	1437	171	0.9805149617258176	+	UCAUCUUCGGAGCUGACUGUAACAAGCC	299	8	1392	9	3	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21157049-21157468	Cluster_372	Pocillopora_meandrina_HIv1___Sc0000000	21157049	21157468	420	78	12	0.038461538461538464	-	AAACGUCAGCUUUUUUACCCA	51	17	2	56	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21409875-21410303	Cluster_373	Pocillopora_meandrina_HIv1___Sc0000000	21409875	21410303	429	462	39	0.0	-	UGUGCAGGAACUUAAAAAUACAAUCUAUA	291	5	455	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21554833-21555299	Cluster_374	Pocillopora_meandrina_HIv1___Sc0000000	21554833	21555299	467	335	222	0.7014925373134329	.	CUGCCUGUUUUUUCGUUUGG	10	203	30	68	28	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:69798-71462	Cluster_375	Pocillopora_meandrina_HIv1___Sc0000001	69798	71462	1665	15023	1165	0.19483458696665112	-	UUGUCUGGAUUGUACACUUUGAAGUGCA	1363	68	14489	39	50	100	277	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:244651-245089	Cluster_376	Pocillopora_meandrina_HIv1___Sc0000001	244651	245089	439	605	144	0.0	-	CAGCACAUUUACUGAAGCCGUCUGA	62	25	501	12	12	16	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:412106-413609	Cluster_377	Pocillopora_meandrina_HIv1___Sc0000001	412106	413609	1504	1799	763	0.054474708171206226	-	UGAUUUCCUCUCUGACAUCUAAAGGU	49	12	1692	7	21	27	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:425522-426000	Cluster_378	Pocillopora_meandrina_HIv1___Sc0000001	425522	426000	479	517	208	0.8317214700193424	+	UCAACGAUCACAAUCUUCCUUACUGCUU	53	7	480	3	2	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:556066-556476	Cluster_379	Pocillopora_meandrina_HIv1___Sc0000001	556066	556476	411	209	159	0.0	-	AAGAUGGACAAUGGCUUCGAGACA	4	54	81	16	22	19	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:818095-818531	Cluster_380	Pocillopora_meandrina_HIv1___Sc0000001	818095	818531	437	403	173	0.9925558312655087	+	AAAGAUCUUGAAGGAACUGAACCUGGCU	17	12	372	4	5	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:868705-869126	Cluster_381	Pocillopora_meandrina_HIv1___Sc0000001	868705	869126	422	295	201	0.006779661016949152	-	CCGAACUGAGAUCAUUAUUUUGGCCA	6	64	134	21	27	10	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:891760-892187	Cluster_382	Pocillopora_meandrina_HIv1___Sc0000001	891760	892187	428	185	67	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	20	1	180	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:911186-911649	Cluster_383	Pocillopora_meandrina_HIv1___Sc0000001	911186	911649	464	473	89	0.864693446088795	+	CGAACCAACAAGAACAAUAUGUGCUGACUAC	132	2	461	1	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:912150-912578	Cluster_384	Pocillopora_meandrina_HIv1___Sc0000001	912150	912578	429	259	75	0.9922779922779923	+	UUGCAAAUGAAUCAGCAGAAUGUAGAGAG	56	2	245	0	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:914054-914481	Cluster_385	Pocillopora_meandrina_HIv1___Sc0000001	914054	914481	428	160	48	0.00625	-	AAUGGAAAGAAAACACUGAAAAAUGAUG	28	7	124	0	1	11	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:917426-917858	Cluster_386	Pocillopora_meandrina_HIv1___Sc0000001	917426	917858	433	318	89	0.48742138364779874	.	UCGAUCACCAGCGCACUCCAAACCAAUAAGG	52	6	254	8	0	28	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:968471-969485	Cluster_387	Pocillopora_meandrina_HIv1___Sc0000001	968471	969485	1015	1871	481	0.21004810261892037	.	UGUACUCUUUCUAUUUUCCUUCGUUCCUGGG	141	30	1774	6	12	13	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:974682-975142	Cluster_388	Pocillopora_meandrina_HIv1___Sc0000001	974682	975142	461	2105	168	0.9144893111638955	+	UUUCACCAAUCCGAAGUGUCCCAAAAGU	491	20	1953	5	14	30	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1051944-1052372	Cluster_389	Pocillopora_meandrina_HIv1___Sc0000001	1051944	1052372	429	135	29	0.9925925925925926	+	CCGCCUGAAAAAAAAAAAAAAAAAAAAAAA	29	6	124	1	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1354659-1355144	Cluster_390	Pocillopora_meandrina_HIv1___Sc0000001	1354659	1355144	486	6396	457	0.0014071294559099437	-	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	1870	149	6091	20	34	69	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1459253-1459676	Cluster_391	Pocillopora_meandrina_HIv1___Sc0000001	1459253	1459676	424	3349	128	1.0	+	AAAGAAGUGCAAGUGGUAGAGA	1704	638	5	343	2295	57	11	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1587809-1588303	Cluster_392	Pocillopora_meandrina_HIv1___Sc0000001	1587809	1588303	495	305	142	0.9180327868852459	+	UCUGAUCGACGAGUUUCAAUCCUUUGU	26	0	291	1	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1588893-1589304	Cluster_393	Pocillopora_meandrina_HIv1___Sc0000001	1588893	1589304	412	156	85	0.9038461538461539	+	UAUGUGAUCGGUGAAUUUGCUUCAACA	20	0	148	0	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1589392-1589818	Cluster_394	Pocillopora_meandrina_HIv1___Sc0000001	1589392	1589818	427	136	75	0.8455882352941176	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	14	3	118	1	2	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1590307-1590710	Cluster_395	Pocillopora_meandrina_HIv1___Sc0000001	1590307	1590710	404	147	86	0.8231292517006803	+	UACUGGAAUAAUAACUUUACGAUCAACA	9	1	140	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1591154-1591562	Cluster_396	Pocillopora_meandrina_HIv1___Sc0000001	1591154	1591562	409	139	89	0.8920863309352518	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	12	1	130	1	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1606008-1606599	Cluster_397	Pocillopora_meandrina_HIv1___Sc0000001	1606008	1606599	592	461	107	0.9718004338394793	+	UACUCCAUUUUUCUGCAGCCUUUUUAUC	57	3	445	6	2	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1639234-1639676	Cluster_398	Pocillopora_meandrina_HIv1___Sc0000001	1639234	1639676	443	203	154	1.0	+	AUAAAGAAUCUGAUGAAUCAAGUA	5	20	120	11	15	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1689513-1689966	Cluster_399	Pocillopora_meandrina_HIv1___Sc0000001	1689513	1689966	454	318	207	0.9968553459119497	+	CUGCCACGAGAAGAACGAACU	7	62	145	30	16	22	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1690274-1690785	Cluster_400	Pocillopora_meandrina_HIv1___Sc0000001	1690274	1690785	512	406	236	0.9950738916256158	+	CGACACCGAGAAACAAACCGAGACU	10	89	195	20	35	43	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1691388-1691808	Cluster_401	Pocillopora_meandrina_HIv1___Sc0000001	1691388	1691808	421	215	143	0.9953488372093023	+	CUUGGUCAUGCGCCGAAUGCCUGAACG	14	47	109	15	10	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1692256-1693064	Cluster_402	Pocillopora_meandrina_HIv1___Sc0000001	1692256	1693064	809	942	583	0.9989384288747346	+	UACAGACAUCUAUGGUAACUCAAAAA	19	189	443	66	65	103	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1723121-1723549	Cluster_403	Pocillopora_meandrina_HIv1___Sc0000001	1723121	1723549	429	406	39	0.0	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	320	0	402	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1981097-1981526	Cluster_404	Pocillopora_meandrina_HIv1___Sc0000001	1981097	1981526	430	116	49	1.0	+	UAUGAUUACGAGGAAUUCUCCAAAGACUUUG	29	2	105	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2046484-2047795	Cluster_405	Pocillopora_meandrina_HIv1___Sc0000001	2046484	2047795	1312	1233	500	0.9716139497161395	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	99	20	1170	4	4	17	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2048235-2048659	Cluster_406	Pocillopora_meandrina_HIv1___Sc0000001	2048235	2048659	425	221	131	0.9547511312217195	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	28	3	200	0	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2049670-2051839	Cluster_407	Pocillopora_meandrina_HIv1___Sc0000001	2049670	2051839	2170	2898	1052	0.9216701173222912	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	101	37	2698	32	18	27	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2051958-2052450	Cluster_408	Pocillopora_meandrina_HIv1___Sc0000001	2051958	2052450	493	515	297	0.7689320388349514	.	UCUGUUCCGGUACAAAUUUUCCCUGC	14	2	441	1	15	13	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2111236-2111657	Cluster_409	Pocillopora_meandrina_HIv1___Sc0000001	2111236	2111657	422	75	5	1.0	+	UCUGACGAAGGGCUGACACUCG	71	0	0	1	73	1	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2233397-2233818	Cluster_410	Pocillopora_meandrina_HIv1___Sc0000001	2233397	2233818	422	105	39	0.9809523809523809	+	GAACCGAAAACUUUCAACAAAAUUCCCUUU	18	10	76	7	8	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2235738-2236164	Cluster_411	Pocillopora_meandrina_HIv1___Sc0000001	2235738	2236164	427	157	80	1.0	+	ACGAAAAUAGCAGAAUGAACGAAGAAGCAC	16	0	150	4	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2237617-2238340	Cluster_412	Pocillopora_meandrina_HIv1___Sc0000001	2237617	2238340	724	3154	461	0.13696892834495877	-	UGAAACUACUUGAACUGGUUCGCUUCAAU	1046	158	2627	149	49	42	129	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2243710-2244293	Cluster_413	Pocillopora_meandrina_HIv1___Sc0000001	2243710	2244293	584	2407	336	0.05774823431657665	-	UUAAAUGAAGUUUCCAAUGUUUGACUGUC	998	17	2295	11	18	46	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2254606-2255281	Cluster_414	Pocillopora_meandrina_HIv1___Sc0000001	2254606	2255281	676	230	119	0.991304347826087	+	UGCAAGAGUUUUUCGCCGCGAGACACCUG	30	10	208	2	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2275231-2275660	Cluster_415	Pocillopora_meandrina_HIv1___Sc0000001	2275231	2275660	430	458	108	1.0	+	ACGAAAAUAACAGAAUGAACUUAGAAGCAC	145	2	445	2	6	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2276928-2277360	Cluster_416	Pocillopora_meandrina_HIv1___Sc0000001	2276928	2277360	433	388	122	0.9226804123711341	+	UUAAAGUAAAAAACACAAAGCUUCCUGCAGA	66	16	353	4	8	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2285037-2285666	Cluster_417	Pocillopora_meandrina_HIv1___Sc0000001	2285037	2285666	630	916	300	0.4039301310043668	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	71	4	879	7	2	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2286291-2287142	Cluster_418	Pocillopora_meandrina_HIv1___Sc0000001	2286291	2287142	852	1262	234	0.9128367670364501	+	CGUGUACGACGCCUCUGCCCGAGCUUCAG	364	8	1217	14	7	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2288505-2288931	Cluster_419	Pocillopora_meandrina_HIv1___Sc0000001	2288505	2288931	427	231	105	0.24242424242424243	.	UCACGAAUCUUUGCCAUUGUGAGGCUCACU	19	5	212	1	2	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2289108-2289522	Cluster_420	Pocillopora_meandrina_HIv1___Sc0000001	2289108	2289522	415	109	64	0.6788990825688074	.	GGUUAUACUAGACGUAGAGGUUGCAGUC	7	6	69	4	2	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2289525-2289963	Cluster_421	Pocillopora_meandrina_HIv1___Sc0000001	2289525	2289963	439	311	172	0.2765273311897106	.	UCUAACGGAUACAGCUGCUGUACUGCU	20	20	257	5	4	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2290080-2290503	Cluster_422	Pocillopora_meandrina_HIv1___Sc0000001	2290080	2290503	424	116	26	0.9741379310344828	+	UAGUGUUGCUAUACUGGGAUUUCC	39	1	64	1	0	1	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2303038-2303468	Cluster_423	Pocillopora_meandrina_HIv1___Sc0000001	2303038	2303468	431	544	115	0.9963235294117647	+	GAACCAAAAACUUUCAACAAAAUUCCCUUU	208	10	509	2	22	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2305359-2305786	Cluster_424	Pocillopora_meandrina_HIv1___Sc0000001	2305359	2305786	428	117	61	0.9914529914529915	+	CUGGCCGACUGAAGACGAACGAGAAUUAGC	17	2	112	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2324994-2325426	Cluster_425	Pocillopora_meandrina_HIv1___Sc0000001	2324994	2325426	433	217	51	0.9815668202764977	+	UUAUUUGGAACCGAAAACUUUC	42	31	135	2	44	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2327372-2327799	Cluster_426	Pocillopora_meandrina_HIv1___Sc0000001	2327372	2327799	428	128	49	1.0	+	AACGAAAAUAGCAGAAUGAACGAAGAAGC	16	1	124	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2328890-2329314	Cluster_427	Pocillopora_meandrina_HIv1___Sc0000001	2328890	2329314	425	178	81	0.23595505617977527	.	AAGCGUGAAACUACUUGAACCGGUU	21	18	106	14	12	9	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2348008-2348432	Cluster_428	Pocillopora_meandrina_HIv1___Sc0000001	2348008	2348432	425	81	37	1.0	+	ACGAAAAUAGCAGAAUGAACGAAGAAGC	13	1	77	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2368290-2368717	Cluster_429	Pocillopora_meandrina_HIv1___Sc0000001	2368290	2368717	428	100	29	0.97	+	GAGCCGAAAACUUUCAACAAAAUUCCCUAU	19	2	81	10	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2487165-2487774	Cluster_430	Pocillopora_meandrina_HIv1___Sc0000001	2487165	2487774	610	267	162	0.9925093632958801	+	ACGAGAUGUAAACUUUCCAGAA	35	38	97	36	58	25	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2537226-2537644	Cluster_431	Pocillopora_meandrina_HIv1___Sc0000001	2537226	2537644	419	262	196	0.007633587786259542	-	UCAAGAGUUUCUGGAACGUGCU	6	59	93	32	30	23	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2731349-2731771	Cluster_432	Pocillopora_meandrina_HIv1___Sc0000001	2731349	2731771	423	211	68	1.0	+	GAUGUUGUGUCGGGACCUGAAAC	70	32	70	3	12	88	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2746252-2746672	Cluster_433	Pocillopora_meandrina_HIv1___Sc0000001	2746252	2746672	421	305	17	0.9967213114754099	+	UCGACUCCCGGUAUGGGAACA	262	0	4	274	19	8	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2774475-2774897	Cluster_434	Pocillopora_meandrina_HIv1___Sc0000001	2774475	2774897	423	370	57	1.0	+	CUGGCUGUGAAAGAUCUCGCAUU	121	13	4	15	133	194	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2801084-2801513	Cluster_435	Pocillopora_meandrina_HIv1___Sc0000001	2801084	2801513	430	178	21	0.0	-	CUAUGUGGCAGUGGGUUUUUGGAUCCUCAU	42	1	177	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2839815-2840244	Cluster_436	Pocillopora_meandrina_HIv1___Sc0000001	2839815	2840244	430	280	113	0.010714285714285714	-	CUGGCCGACUGAAGACGAACGAGAAUUAGC	47	6	264	3	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2842056-2842485	Cluster_437	Pocillopora_meandrina_HIv1___Sc0000001	2842056	2842485	430	168	19	0.0	-	CUAUGUGGCCGUGGGUUUUUGGAUCCUCAU	39	0	167	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2858484-2858998	Cluster_438	Pocillopora_meandrina_HIv1___Sc0000001	2858484	2858998	515	239	112	0.03765690376569038	-	UUUAAGUAAAAACACAAAGCUUCCUGCAGA	24	16	208	4	4	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2862246-2862675	Cluster_439	Pocillopora_meandrina_HIv1___Sc0000001	2862246	2862675	430	525	87	0.005714285714285714	-	UUAUGUGGCAGUGUGUUUUUGGAUCCUGA	251	9	505	3	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2868049-2868506	Cluster_440	Pocillopora_meandrina_HIv1___Sc0000001	2868049	2868506	458	634	146	0.1277602523659306	-	UUCGAUCCUAAAUUCUCUCCAUG	119	27	301	17	65	201	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2881477-2881912	Cluster_441	Pocillopora_meandrina_HIv1___Sc0000001	2881477	2881912	436	288	73	0.003472222222222222	-	GGCAGUGGGUUUUUGGAUCCUGAUCAGUGU	82	13	267	0	4	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2903040-2903512	Cluster_442	Pocillopora_meandrina_HIv1___Sc0000001	2903040	2903512	473	288	141	0.006944444444444444	-	UGCUGGCCGACUGAGGACGAACAAGAAUU	21	7	267	3	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2905338-2905767	Cluster_443	Pocillopora_meandrina_HIv1___Sc0000001	2905338	2905767	430	308	51	0.00974025974025974	-	UUAUGUGGCAGUGUGUUUUUGGAUCCUGA	129	7	300	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2983017-2983446	Cluster_444	Pocillopora_meandrina_HIv1___Sc0000001	2983017	2983446	430	126	31	1.0	+	UUGGAACAAAGAUUGAACAUGAUGCUUUUC	54	2	121	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3114844-3115375	Cluster_445	Pocillopora_meandrina_HIv1___Sc0000001	3114844	3115375	532	1724	297	1.0	+	UUGGAAGCUGGCUGUUUUGACU	319	84	660	119	592	148	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3115989-3116533	Cluster_446	Pocillopora_meandrina_HIv1___Sc0000001	3115989	3116533	545	447	146	0.9955257270693513	+	CAGGAAGUGAGAUGCUUUGAAUGGUGAAU	50	39	319	7	18	33	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3380068-3380495	Cluster_447	Pocillopora_meandrina_HIv1___Sc0000001	3380068	3380495	428	130	45	0.06923076923076923	-	UUGGUGUGAUUGUCAUGUCUGGGAAUUUU	33	2	125	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3428051-3428455	Cluster_448	Pocillopora_meandrina_HIv1___Sc0000001	3428051	3428455	405	115	68	1.0	+	GACGAAGUGGCCGAGUGG	14	57	31	4	3	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3434623-3435032	Cluster_449	Pocillopora_meandrina_HIv1___Sc0000001	3434623	3435032	410	180	84	0.5833333333333334	.	UAAACAACAGAAAGUCCUUUGAAACGUG	14	5	140	2	0	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3536699-3537118	Cluster_450	Pocillopora_meandrina_HIv1___Sc0000001	3536699	3537118	420	93	19	0.021505376344086023	-	CAACCAGGGAUUGAGAACAGAGGA	23	37	11	4	12	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3656409-3656832	Cluster_451	Pocillopora_meandrina_HIv1___Sc0000001	3656409	3656832	424	99	46	0.0	-	UACUGGACUGCAUCUGAAUAUUCCU	14	3	67	1	8	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3883545-3883976	Cluster_452	Pocillopora_meandrina_HIv1___Sc0000001	3883545	3883976	432	252	149	1.0	+	UCUGAUGGUCUUAAGGGACGUGUGUUU	14	34	161	10	14	21	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3998764-3999467	Cluster_453	Pocillopora_meandrina_HIv1___Sc0000001	3998764	3999467	704	1091196	5671	1.1913533407380525e-05	-	CGACCAAGAUAGUCGAACUCGACCCUGUCA	311676	72346	903072	8639	60040	31476	15623	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4021711-4022206	Cluster_454	Pocillopora_meandrina_HIv1___Sc0000001	4021711	4022206	496	2524	333	0.9904912836767037	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	355	15	2435	8	12	20	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4023278-4023700	Cluster_455	Pocillopora_meandrina_HIv1___Sc0000001	4023278	4023700	423	92	25	0.0	-	GGGGAAUUAGCUCAAAUGGUAGAGCGCU	26	14	56	8	3	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4053472-4054172	Cluster_456	Pocillopora_meandrina_HIv1___Sc0000001	4053472	4054172	701	69637	3862	0.9995404741732126	+	UGGGGGUAGUCGUUCUAUGU	14026	37543	17081	4969	2166	2687	5191	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4062957-4064324	Cluster_457	Pocillopora_meandrina_HIv1___Sc0000001	4062957	4064324	1368	6326	895	0.9596901675624407	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	1406	35	6026	14	26	78	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4064498-4065026	Cluster_458	Pocillopora_meandrina_HIv1___Sc0000001	4064498	4065026	529	697	247	0.7044476327116213	.	UGUGACUGCUUGCAAUAAUAUUAUACA	123	13	651	6	3	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4118827-4119300	Cluster_459	Pocillopora_meandrina_HIv1___Sc0000001	4118827	4119300	474	569	224	0.028119507908611598	-	GAAGGCUGCGUGUUCAGGUCACGUCGGGGU	102	170	272	41	31	40	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4229586-4230014	Cluster_460	Pocillopora_meandrina_HIv1___Sc0000001	4229586	4230014	429	463	81	1.0	+	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	160	20	427	7	4	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4298315-4298771	Cluster_461	Pocillopora_meandrina_HIv1___Sc0000001	4298315	4298771	457	8246	550	0.0020616056269706523	-	ACGAUCUUCUGAGAUUAAGCCUUUGUU	2230	449	6434	327	385	212	439	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4313479-4313894	Cluster_462	Pocillopora_meandrina_HIv1___Sc0000001	4313479	4313894	416	158	116	0.0	-	GUGAGGGCAAACUGCAAGAAGACC	6	46	48	13	14	23	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4315116-4315571	Cluster_463	Pocillopora_meandrina_HIv1___Sc0000001	4315116	4315571	456	251	163	0.0	-	GCAGGGCUUUCAGCA	20	85	66	35	30	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4316894-4317370	Cluster_464	Pocillopora_meandrina_HIv1___Sc0000001	4316894	4317370	477	267	126	0.0	-	CCUCGUACGUAGGAAGAACAGGCA	21	30	108	25	11	49	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4317598-4318009	Cluster_465	Pocillopora_meandrina_HIv1___Sc0000001	4317598	4318009	412	156	120	0.0	-	CUCGUGAUUCCAGAGCAAUGAACGC	5	39	62	13	15	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4345270-4345692	Cluster_466	Pocillopora_meandrina_HIv1___Sc0000001	4345270	4345692	423	109	63	0.06422018348623854	-	UUCAAUGGGAAAACGAGAACAGCGUGAGU	8	2	96	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4361244-4364034	Cluster_467	Pocillopora_meandrina_HIv1___Sc0000001	4361244	4364034	2791	7666	1839	0.9268197234542134	+	UAUUCUGGAUACUGUUUAUAUUUAAAUGAC	287	45	7203	49	56	106	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4364284-4365035	Cluster_468	Pocillopora_meandrina_HIv1___Sc0000001	4364284	4365035	752	1158	440	0.5915371329879102	.	GCGUUGUUUAAGCUGACAUCUUACUGAUA	92	14	1008	7	10	32	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4428344-4428761	Cluster_469	Pocillopora_meandrina_HIv1___Sc0000001	4428344	4428761	418	121	30	0.9917355371900827	+	UAAUAAGCGGAGGAAAAG	42	120	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4445438-4445865	Cluster_470	Pocillopora_meandrina_HIv1___Sc0000001	4445438	4445865	428	79	21	0.9620253164556962	+	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	35	6	69	3	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4479220-4479714	Cluster_471	Pocillopora_meandrina_HIv1___Sc0000001	4479220	4479714	495	523	285	0.19694072657743786	-	UGUUCCGGUACAAAUUUUCCCUGCAUA	21	5	450	1	7	16	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4479834-4480826	Cluster_472	Pocillopora_meandrina_HIv1___Sc0000001	4479834	4480826	993	1111	447	0.08010801080108011	-	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	107	11	1026	6	9	5	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4480964-4482069	Cluster_473	Pocillopora_meandrina_HIv1___Sc0000001	4480964	4482069	1106	1760	534	0.03806818181818182	-	UAUAGUUCUUCUGUACUGGCUCAUUGUC	235	14	1690	8	9	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4483014-4484061	Cluster_474	Pocillopora_meandrina_HIv1___Sc0000001	4483014	4484061	1048	846	410	0.10047281323877069	-	UACUAGCUGCAAUCGACUCUUAAUUUGG	45	33	731	18	10	18	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4484096-4485189	Cluster_475	Pocillopora_meandrina_HIv1___Sc0000001	4484096	4485189	1094	1070	434	0.018691588785046728	-	UGAGACUCUCUUGUUGUAAUAUUGCUUG	94	14	1029	3	0	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4593126-4593549	Cluster_476	Pocillopora_meandrina_HIv1___Sc0000001	4593126	4593549	424	137	63	0.0072992700729927005	-	UAAGAUCUGACUUUCACAUAGCUAGGA	9	7	125	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4872395-4873265	Cluster_477	Pocillopora_meandrina_HIv1___Sc0000001	4872395	4873265	871	733	183	0.5320600272851296	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	207	32	591	15	12	32	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5026269-5026686	Cluster_478	Pocillopora_meandrina_HIv1___Sc0000001	5026269	5026686	418	128	13	0.0	-	GUCCUGGCAGGGUCGCCA	93	127	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5036295-5036724	Cluster_479	Pocillopora_meandrina_HIv1___Sc0000001	5036295	5036724	430	302	76	0.9039735099337748	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUC	116	19	247	6	8	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5073837-5074560	Cluster_480	Pocillopora_meandrina_HIv1___Sc0000001	5073837	5074560	724	621	92	0.040257648953301126	-	UUUAAAGGGGAAGACAAUACAUCUGUA	96	4	610	0	5	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5093741-5094167	Cluster_481	Pocillopora_meandrina_HIv1___Sc0000001	5093741	5094167	427	380	29	0.0	-	UGGUAAAAUUCUGUUCAAAGUAGGCUU	106	0	380	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5129936-5130336	Cluster_482	Pocillopora_meandrina_HIv1___Sc0000001	5129936	5130336	401	161	86	0.4720496894409938	.	UUUGAGGGACUUGUCCACAUAAAGCGU	23	38	91	20	8	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5134576-5135003	Cluster_483	Pocillopora_meandrina_HIv1___Sc0000001	5134576	5135003	428	207	68	0.9516908212560387	+	UGCAUUGUAAUCGGGAUAGACCUAUUGA	43	3	192	4	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5144160-5145106	Cluster_484	Pocillopora_meandrina_HIv1___Sc0000001	5144160	5145106	947	4379	854	0.8111440968257593	+	UAUUUGAUCUGUCUACCUCUUUAAAGGA	278	62	3619	40	59	176	423	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5204084-5204505	Cluster_485	Pocillopora_meandrina_HIv1___Sc0000001	5204084	5204505	422	133	81	1.0	+	GACAAUGACGUUGAAGACUGUGACGGAGACC	8	18	71	7	8	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5482791-5483217	Cluster_486	Pocillopora_meandrina_HIv1___Sc0000001	5482791	5483217	427	125	33	0.0	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	57	3	117	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5590662-5591125	Cluster_487	Pocillopora_meandrina_HIv1___Sc0000001	5590662	5591125	464	1882	147	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	581	16	1845	2	4	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5600400-5600827	Cluster_488	Pocillopora_meandrina_HIv1___Sc0000001	5600400	5600827	428	141	35	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	47	4	136	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5608181-5608632	Cluster_489	Pocillopora_meandrina_HIv1___Sc0000001	5608181	5608632	452	408	113	1.0	+	GCCCACCCGGGGACGCCA	83	173	66	31	50	64	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5619912-5620331	Cluster_490	Pocillopora_meandrina_HIv1___Sc0000001	5619912	5620331	420	90	29	1.0	+	UCCUCGGUAGUAUAGUGGUAAGUAUCCC	23	24	66	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5625745-5626172	Cluster_491	Pocillopora_meandrina_HIv1___Sc0000001	5625745	5626172	428	224	16	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	164	1	223	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5635582-5636009	Cluster_492	Pocillopora_meandrina_HIv1___Sc0000001	5635582	5636009	428	598	68	0.9983277591973244	+	GUUUCUGUAGUGUAGUGG	172	383	187	7	3	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5637924-5638351	Cluster_493	Pocillopora_meandrina_HIv1___Sc0000001	5637924	5638351	428	235	13	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	183	0	235	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5669304-5669731	Cluster_494	Pocillopora_meandrina_HIv1___Sc0000001	5669304	5669731	428	216	19	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	165	0	214	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5689306-5689769	Cluster_495	Pocillopora_meandrina_HIv1___Sc0000001	5689306	5689769	464	670	91	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	206	9	656	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5693899-5694317	Cluster_496	Pocillopora_meandrina_HIv1___Sc0000001	5693899	5694317	419	473	35	0.9894291754756871	+	GUUUCUGUAGUGUAGUGG	240	464	5	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5746164-5746597	Cluster_497	Pocillopora_meandrina_HIv1___Sc0000001	5746164	5746597	434	1719	171	0.059336823734729496	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	513	253	1370	62	23	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5795956-5796536	Cluster_498	Pocillopora_meandrina_HIv1___Sc0000001	5795956	5796536	581	594	358	0.003367003367003367	-	ACUUUCGUCGGCCUAGACA	22	214	185	60	53	44	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5796550-5797171	Cluster_499	Pocillopora_meandrina_HIv1___Sc0000001	5796550	5797171	622	387	280	0.015503875968992248	-	CGUGGUGUGAAGUUGCAGCUCUCUGU	6	96	133	40	48	45	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5801163-5801729	Cluster_500	Pocillopora_meandrina_HIv1___Sc0000001	5801163	5801729	567	332	246	1.0	+	UUGCUCUUGUAGAUUGAUGUGAAGAAUGC	5	71	120	33	38	40	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5839178-5839672	Cluster_501	Pocillopora_meandrina_HIv1___Sc0000001	5839178	5839672	495	1538	279	0.9837451235370611	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	303	11	1456	10	14	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6251647-6253384	Cluster_502	Pocillopora_meandrina_HIv1___Sc0000001	6251647	6253384	1738	2767	1102	0.9541019154318757	+	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	79	18	2623	9	21	47	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6367471-6367897	Cluster_503	Pocillopora_meandrina_HIv1___Sc0000001	6367471	6367897	427	178	66	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	25	2	172	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6400836-6401347	Cluster_504	Pocillopora_meandrina_HIv1___Sc0000001	6400836	6401347	512	271	56	0.43911439114391143	.	UCCGAGUGCUGCACCUUCUUUCAUGGGA	78	6	214	4	11	24	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6419212-6419640	Cluster_505	Pocillopora_meandrina_HIv1___Sc0000001	6419212	6419640	429	407	32	0.03931203931203931	-	UGACUUGAUUUUUUACGGCAUUUUGUAUC	334	5	395	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6511512-6512099	Cluster_506	Pocillopora_meandrina_HIv1___Sc0000001	6511512	6512099	588	569	195	0.718804920913884	.	UGUUCUGGCAUUCUUCCGGUCUGUUUUC	52	11	518	3	1	16	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6593781-6594210	Cluster_507	Pocillopora_meandrina_HIv1___Sc0000001	6593781	6594210	430	840	81	0.9976190476190476	+	UCUCAACCCAGUUCCAAGAUCACACCGUUA	305	22	816	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6853834-6854260	Cluster_508	Pocillopora_meandrina_HIv1___Sc0000001	6853834	6854260	427	141	61	0.03546099290780142	-	UGUGUUCUCUUUCAAGUCUAGUCUUGUU	18	1	132	0	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6854403-6854831	Cluster_509	Pocillopora_meandrina_HIv1___Sc0000001	6854403	6854831	429	153	33	0.006535947712418301	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	77	0	152	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6984277-6984706	Cluster_510	Pocillopora_meandrina_HIv1___Sc0000001	6984277	6984706	430	663	29	1.0	+	GACUGGUGCAUUGCUUGUCGGCGACUCAUG	498	1	660	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6989290-6989709	Cluster_511	Pocillopora_meandrina_HIv1___Sc0000001	6989290	6989709	420	96	44	0.9791666666666666	+	UGUAAACUCCGUAUUUAACAACAAAU	12	0	93	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7006569-7007371	Cluster_512	Pocillopora_meandrina_HIv1___Sc0000001	7006569	7007371	803	770	320	0.8389610389610389	+	UGAAUCGUGGGCAAAUGAUAUUCAAUGAUC	29	10	726	1	2	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7068691-7069113	Cluster_513	Pocillopora_meandrina_HIv1___Sc0000001	7068691	7069113	423	123	42	0.983739837398374	+	UGAAUAGCAUAACUGAUGAACUACGUG	18	0	121	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7069393-7070084	Cluster_514	Pocillopora_meandrina_HIv1___Sc0000001	7069393	7070084	692	783	340	0.8084291187739464	+	UGAACUAAACCAUUUACUUGCAACUGGAGU	38	7	732	5	8	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7070254-7070991	Cluster_515	Pocillopora_meandrina_HIv1___Sc0000001	7070254	7070991	738	812	295	0.9408866995073891	+	UCCGUGACACAACGACUUUGCCUUGCUU	127	8	792	3	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7075985-7076412	Cluster_516	Pocillopora_meandrina_HIv1___Sc0000001	7075985	7076412	428	105	18	0.01904761904761905	-	UACCAAGGUCUUGUAGUCUAGUACAACU	59	0	103	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7279602-7280015	Cluster_517	Pocillopora_meandrina_HIv1___Sc0000001	7279602	7280015	414	105	50	0.3333333333333333	.	GUAGAAGCAAGAGCUUGAGACA	22	47	11	12	25	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7467089-7467518	Cluster_518	Pocillopora_meandrina_HIv1___Sc0000001	7467089	7467518	430	390	90	0.046153846153846156	-	UUGAACGUCACUGUCUGUCGGCGAUACGGA	64	7	362	2	9	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7469649-7470757	Cluster_519	Pocillopora_meandrina_HIv1___Sc0000001	7469649	7470757	1109	1986	595	0.4959718026183283	.	ACAUGACAAAACUACGAGCUUAGAAGA	312	6	1726	6	7	64	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7472170-7472935	Cluster_520	Pocillopora_meandrina_HIv1___Sc0000001	7472170	7472935	766	1139	456	0.2993854258121159	.	UGGAUCAAUCUGUUUUUUAUGACAAUAU	37	8	1008	3	8	13	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7487307-7488525	Cluster_521	Pocillopora_meandrina_HIv1___Sc0000001	7487307	7488525	1219	1308	439	0.441131498470948	.	UUGACGAGUAUGGUGUACGAAAGAUGAGU	140	6	1211	17	13	13	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7491752-7493069	Cluster_522	Pocillopora_meandrina_HIv1___Sc0000001	7491752	7493069	1318	6163	1644	0.3087781924387474	.	AGGUGUAGAAUGUAAAAAGCAGCA	189	117	4965	63	41	282	695	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7494162-7495699	Cluster_523	Pocillopora_meandrina_HIv1___Sc0000001	7494162	7495699	1538	2007	899	0.752366716492277	.	UAAUCUCACUAGUGUCAAAGUAAACUCUUG	84	44	1812	14	16	31	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7498871-7499301	Cluster_524	Pocillopora_meandrina_HIv1___Sc0000001	7498871	7499301	431	92	28	0.06521739130434782	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	32	0	88	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7508339-7508769	Cluster_525	Pocillopora_meandrina_HIv1___Sc0000001	7508339	7508769	431	617	201	0.07293354943273905	-	UAACGUAGUGGUAUCCAUUGAACAAGUUC	77	4	539	2	1	5	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7509029-7510080	Cluster_526	Pocillopora_meandrina_HIv1___Sc0000001	7509029	7510080	1052	676	351	0.2411242603550296	.	UGAUCAUAUAUUAUUCUAUCUGGAGAGG	25	6	629	8	3	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7511923-7512335	Cluster_527	Pocillopora_meandrina_HIv1___Sc0000001	7511923	7512335	413	297	175	0.797979797979798	.	UCUGUUCGCUUCCGUCGGGUUUUGGGC	26	6	265	4	2	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7512926-7513351	Cluster_528	Pocillopora_meandrina_HIv1___Sc0000001	7512926	7513351	426	185	94	0.0	-	UGAGCUACUGUGUGACGCCGGUCUUACUUU	23	0	177	0	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7520229-7520819	Cluster_529	Pocillopora_meandrina_HIv1___Sc0000001	7520229	7520819	591	12788	453	0.050281513919299345	-	UAAAAUCGUUUCAAUGCUCUGAGCACUGUU	2597	10	12549	20	11	126	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7521100-7521526	Cluster_530	Pocillopora_meandrina_HIv1___Sc0000001	7521100	7521526	427	149	53	0.19463087248322147	-	UCAGAAUUGGUGGGCUCAGUGGACGGCC	29	3	131	1	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7522572-7523021	Cluster_531	Pocillopora_meandrina_HIv1___Sc0000001	7522572	7523021	450	548	131	0.0	-	UCCGAUUUAAAAGAUUCUUUGUUUCCAGC	114	3	513	1	18	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7523238-7523895	Cluster_532	Pocillopora_meandrina_HIv1___Sc0000001	7523238	7523895	658	867	223	0.029988465974625143	-	UAGAAUAAAGCUGAUCUGCAGUUACUGC	192	5	838	1	6	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7529408-7530207	Cluster_533	Pocillopora_meandrina_HIv1___Sc0000001	7529408	7530207	800	1982	328	0.0015136226034308778	-	UAAUGAUUUCCGUUCUAGCAGCCUCUGC	330	4	1954	4	2	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7533042-7534283	Cluster_534	Pocillopora_meandrina_HIv1___Sc0000001	7533042	7534283	1242	11390	1516	0.028533801580333626	-	UCUGACUGACUAACAGGAUAUCUGCUUC	733	63	11029	26	36	93	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7538234-7538725	Cluster_535	Pocillopora_meandrina_HIv1___Sc0000001	7538234	7538725	492	912	179	0.020833333333333332	-	UGUAACUCUAAACUUUGGAGCUUGGAUG	147	124	738	1	7	3	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7538914-7539332	Cluster_536	Pocillopora_meandrina_HIv1___Sc0000001	7538914	7539332	419	160	57	0.03125	-	UGAUAUAAUUAUGAAGGCUUUUGAAUGA	28	0	156	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7540437-7540867	Cluster_537	Pocillopora_meandrina_HIv1___Sc0000001	7540437	7540867	431	207	79	0.004830917874396135	-	UCGUUCGAUUUGGGGGAAAUGGAUCCUGC	33	2	199	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7540920-7541875	Cluster_538	Pocillopora_meandrina_HIv1___Sc0000001	7540920	7541875	956	635	268	0.007874015748031496	-	UGUUCUAACUGUUAUCUUUGUGUUCCAGCU	56	6	618	0	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7542065-7542493	Cluster_539	Pocillopora_meandrina_HIv1___Sc0000001	7542065	7542493	429	143	72	0.013986013986013986	-	UCGGAAAAUUGUAUGUCGUGUGUGCCCUGU	18	2	133	2	0	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7542514-7542923	Cluster_540	Pocillopora_meandrina_HIv1___Sc0000001	7542514	7542923	410	296	137	0.0033783783783783786	-	UGCUUUUGGUUUGUGGAUGGAACUGUCCGC	40	0	288	0	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7544193-7544782	Cluster_541	Pocillopora_meandrina_HIv1___Sc0000001	7544193	7544782	590	522	144	0.007662835249042145	-	UAAUCUCUGGUUCACUUUAGAUAUCACAUG	205	4	511	0	0	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7546738-7547162	Cluster_542	Pocillopora_meandrina_HIv1___Sc0000001	7546738	7547162	425	90	31	0.08888888888888889	-	UGUUCCAGUUGUACAUCAGAUACCUCU	17	0	81	0	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7550204-7550617	Cluster_543	Pocillopora_meandrina_HIv1___Sc0000001	7550204	7550617	414	217	98	0.055299539170506916	-	UGAAGAAACGAGACUCGUUUAACGAAACGA	34	4	198	0	4	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7558282-7559613	Cluster_544	Pocillopora_meandrina_HIv1___Sc0000001	7558282	7559613	1332	1758	649	0.0011376564277588168	-	UAGAAAUGACGACUGCAGUUUUUACAUGC	67	22	1696	6	7	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7559618-7560418	Cluster_545	Pocillopora_meandrina_HIv1___Sc0000001	7559618	7560418	801	731	247	0.0013679890560875513	-	UCUUCCAUGACCAACCACA	66	102	611	6	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7560573-7561712	Cluster_546	Pocillopora_meandrina_HIv1___Sc0000001	7560573	7561712	1140	1719	319	0.004653868528214078	-	UCCAUCUUUCCGUCUUUGGUUCACCUC	509	53	1648	4	1	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7562095-7562863	Cluster_547	Pocillopora_meandrina_HIv1___Sc0000001	7562095	7562863	769	940	351	0.0010638297872340426	-	UGAACUGUGAAAUGUGUAUUAAACACCCUAC	92	6	903	5	5	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7563001-7563428	Cluster_548	Pocillopora_meandrina_HIv1___Sc0000001	7563001	7563428	428	143	51	0.0	-	UUUUACAUUUUCCCUUCUCCUUCCAGUUU	24	2	135	2	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7564613-7565042	Cluster_549	Pocillopora_meandrina_HIv1___Sc0000001	7564613	7565042	430	217	59	0.0	-	AGUCCAUCCAAACUUUUGUAACUUAAUUUU	85	0	212	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7566258-7566688	Cluster_550	Pocillopora_meandrina_HIv1___Sc0000001	7566258	7566688	431	148	60	0.0	-	UGUAAAUUGUGUGGAAGGUCUAGCAUUUGUU	26	1	143	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7569379-7569807	Cluster_551	Pocillopora_meandrina_HIv1___Sc0000001	7569379	7569807	429	215	94	0.0	-	UUUGAGCUGAGAACUUUUUAAUUCUGUU	28	6	201	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7570177-7572160	Cluster_552	Pocillopora_meandrina_HIv1___Sc0000001	7570177	7572160	1984	6910	1702	0.23256150506512302	.	UGGACGUACAUGCAGGAUUUGUCAUAC	815	56	6064	46	60	191	493	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7573576-7574769	Cluster_553	Pocillopora_meandrina_HIv1___Sc0000001	7573576	7574769	1194	3162	855	0.7574320050600886	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	654	36	2857	11	129	48	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7577524-7577952	Cluster_554	Pocillopora_meandrina_HIv1___Sc0000001	7577524	7577952	429	184	24	0.005434782608695652	-	UUGACUGACAGAAGAUCUGGAAACUGAAG	58	2	177	1	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7578198-7579805	Cluster_555	Pocillopora_meandrina_HIv1___Sc0000001	7578198	7579805	1608	20540	2906	0.11017526777020448	-	UACUUUCUGAUUGACUUGGAGUGUGGGG	986	274	18147	138	148	510	1323	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7592653-7593081	Cluster_556	Pocillopora_meandrina_HIv1___Sc0000001	7592653	7593081	429	153	65	0.9607843137254902	+	UUGUUAACUUUGUCUACCAGAUCUUAUC	19	12	135	1	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7595171-7595581	Cluster_557	Pocillopora_meandrina_HIv1___Sc0000001	7595171	7595581	411	147	70	0.5918367346938775	.	CACCCGGUCAAUUUUGCGUCAAAAAUAAUUU	13	11	117	6	2	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7909734-7910162	Cluster_558	Pocillopora_meandrina_HIv1___Sc0000001	7909734	7910162	429	189	88	0.9947089947089947	+	AUCUGAACAAAAGAAAAGACACCAAGGAG	47	15	142	8	8	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8154885-8155313	Cluster_559	Pocillopora_meandrina_HIv1___Sc0000001	8154885	8155313	429	215	62	0.9720930232558139	+	UUGGAUUUAGGUGAGCUUGAAGAUUGUA	33	3	208	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8158110-8159082	Cluster_560	Pocillopora_meandrina_HIv1___Sc0000001	8158110	8159082	973	873	293	0.7491408934707904	.	UCACACUUUUGUCUCGCGAGUCGUUGGCA	112	14	797	10	17	7	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8214007-8214547	Cluster_561	Pocillopora_meandrina_HIv1___Sc0000001	8214007	8214547	541	571	149	0.7828371278458844	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	183	1	551	7	4	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8221612-8222035	Cluster_562	Pocillopora_meandrina_HIv1___Sc0000001	8221612	8222035	424	272	65	0.11029411764705882	-	AUGGACAGAACACAGGAAGUGCU	66	6	100	2	5	130	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8242888-8243317	Cluster_563	Pocillopora_meandrina_HIv1___Sc0000001	8242888	8243317	430	320	111	0.890625	+	UCAGCAAUACCUAAUUCUUCGUGUAGACGU	58	1	290	0	0	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8263506-8263933	Cluster_564	Pocillopora_meandrina_HIv1___Sc0000001	8263506	8263933	428	89	24	0.9550561797752809	+	UAACUUCAACUAGAUCAAAAUGCUCGUGA	50	0	84	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8270841-8271268	Cluster_565	Pocillopora_meandrina_HIv1___Sc0000001	8270841	8271268	428	190	107	0.07894736842105263	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	24	2	178	2	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8286803-8289064	Cluster_566	Pocillopora_meandrina_HIv1___Sc0000001	8286803	8289064	2262	9064	2404	0.06023830538393645	-	UAUGUACGAUUUUAACUGGAAGAAACGUUU	533	157	8487	29	71	153	167	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8293722-8294136	Cluster_567	Pocillopora_meandrina_HIv1___Sc0000001	8293722	8294136	415	136	74	0.0	-	UAUGUCACUGGAUCUAGUCGCUCGCACACU	10	0	130	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8294312-8294868	Cluster_568	Pocillopora_meandrina_HIv1___Sc0000001	8294312	8294868	557	494	197	0.018218623481781375	-	UGGAACCCUUUACGAUUGACAACAUCGUUU	61	1	476	1	2	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8295500-8295920	Cluster_569	Pocillopora_meandrina_HIv1___Sc0000001	8295500	8295920	421	239	119	0.5481171548117155	.	GAAGGUUCCAUCUGCUUCAUUCUG	20	2	173	1	3	4	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8306212-8307604	Cluster_570	Pocillopora_meandrina_HIv1___Sc0000001	8306212	8307604	1393	2606	708	0.05832693783576362	-	UGAUUAUUGCGUCUUCAGUGACUUCUGA	273	23	2434	12	35	26	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8320150-8320577	Cluster_571	Pocillopora_meandrina_HIv1___Sc0000001	8320150	8320577	428	101	10	0.009900990099009901	-	UAACCCGAGAACUGACACGUGAGUAGUC	77	0	91	1	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8324680-8325107	Cluster_572	Pocillopora_meandrina_HIv1___Sc0000001	8324680	8325107	428	89	6	0.0	-	UAACCCGAGAACUGACACGUGAGUAGUC	64	1	78	0	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8337585-8338062	Cluster_573	Pocillopora_meandrina_HIv1___Sc0000001	8337585	8338062	478	275	159	0.19636363636363635	-	AUACACAACAACUGGCGACGAGGA	12	11	222	3	7	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8338134-8338823	Cluster_574	Pocillopora_meandrina_HIv1___Sc0000001	8338134	8338823	690	486	246	0.09876543209876543	-	UAAUCAUCUUCGAGUCGCGGAUACCUGA	55	14	434	4	5	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8340034-8340819	Cluster_575	Pocillopora_meandrina_HIv1___Sc0000001	8340034	8340819	786	1885	466	0.013262599469496022	-	UGCAUUCUCAAGUCGUGCUCUGUAACGG	136	27	1737	9	13	14	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8340966-8341392	Cluster_576	Pocillopora_meandrina_HIv1___Sc0000001	8340966	8341392	427	197	73	0.015228426395939087	-	UCAGACGUGAACUGUGGACCAUUAUC	18	0	188	4	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8343194-8343622	Cluster_577	Pocillopora_meandrina_HIv1___Sc0000001	8343194	8343622	429	201	49	0.0	-	UAAAGCUUGAACCUUCCAACACGUCCGACA	47	3	177	5	7	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8346273-8347331	Cluster_578	Pocillopora_meandrina_HIv1___Sc0000001	8346273	8347331	1059	876	362	0.2374429223744292	.	UGAGAUUUCUGCAUUUCCUCAAGCACGU	71	9	762	8	10	36	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8351582-8352234	Cluster_579	Pocillopora_meandrina_HIv1___Sc0000001	8351582	8352234	653	295	94	0.0	-	CCAGUAUCUGUUUGUUUAGUUCUAGAAUAUC	56	1	281	0	2	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8355697-8356143	Cluster_580	Pocillopora_meandrina_HIv1___Sc0000001	8355697	8356143	447	279	117	0.0	-	UUGGCGUGUUUAAGUACUUCUGAUCUUGAC	57	1	275	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8359679-8360122	Cluster_581	Pocillopora_meandrina_HIv1___Sc0000001	8359679	8360122	444	442	132	0.38461538461538464	.	ACAAGAAUCAAGGAAACUCAACUG	47	1	301	2	5	53	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8364194-8364619	Cluster_582	Pocillopora_meandrina_HIv1___Sc0000001	8364194	8364619	426	84	38	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	13	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8370312-8370827	Cluster_583	Pocillopora_meandrina_HIv1___Sc0000001	8370312	8370827	516	788	213	0.6078680203045685	.	UGGAUUAUCAACAAUUGGAAAGAAGGACA	101	12	701	3	8	19	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8371244-8372173	Cluster_584	Pocillopora_meandrina_HIv1___Sc0000001	8371244	8372173	930	1300	528	0.002307692307692308	-	UGGUCUUUCUCGUCUGCUUUCUCGAUGGC	73	9	1207	9	4	39	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8373184-8373893	Cluster_585	Pocillopora_meandrina_HIv1___Sc0000001	8373184	8373893	710	755	240	0.0	-	UGAGUUUGUAGAAGCAAUUUGCCAUCUGC	73	8	732	1	6	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8375664-8376083	Cluster_586	Pocillopora_meandrina_HIv1___Sc0000001	8375664	8376083	420	127	68	0.007874015748031496	-	UUCGAACGUUCCAACGACUGGCAAAGGCU	19	1	119	0	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8379019-8379428	Cluster_587	Pocillopora_meandrina_HIv1___Sc0000001	8379019	8379428	410	108	53	0.009259259259259259	-	UGUAAGUGUAGCCCUGAGUAUUGAUCAGC	24	2	99	4	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8384609-8385719	Cluster_588	Pocillopora_meandrina_HIv1___Sc0000001	8384609	8385719	1111	928	288	0.005387931034482759	-	UUCUUGUAUUCGAAGGCUGGCUGCAACUGC	141	11	885	3	5	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8386118-8387061	Cluster_589	Pocillopora_meandrina_HIv1___Sc0000001	8386118	8387061	944	7679	809	0.0028649563745279335	-	UCGACAUCUUUUUGUGUGGGUCUACUGC	737	55	7514	12	12	16	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8394040-8394753	Cluster_590	Pocillopora_meandrina_HIv1___Sc0000001	8394040	8394753	714	626	163	0.0	-	UAUCUUCUCGAGACUCAGGAAUUCCAGUGA	116	6	604	4	3	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8400205-8400676	Cluster_591	Pocillopora_meandrina_HIv1___Sc0000001	8400205	8400676	472	422	122	0.31516587677725116	.	CGUGUGAAUAUAGUAGCGUUGAUU	80	2	288	6	0	7	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8401927-8402354	Cluster_592	Pocillopora_meandrina_HIv1___Sc0000001	8401927	8402354	428	260	124	0.007692307692307693	-	UGUAUCAAAGGACUUCUUCCAGGUGGGAUA	32	3	252	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8403550-8403979	Cluster_593	Pocillopora_meandrina_HIv1___Sc0000001	8403550	8403979	430	159	69	0.0	-	UGUGUCUUUGCCACUAGAUGACUGAUGGUU	30	3	152	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8404971-8405395	Cluster_594	Pocillopora_meandrina_HIv1___Sc0000001	8404971	8405395	425	94	42	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	21	0	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8406664-8407092	Cluster_595	Pocillopora_meandrina_HIv1___Sc0000001	8406664	8407092	429	248	92	0.0	-	UGUUUUGUUCUGUGUCGCAUUCUGCAGGC	71	3	243	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8409239-8409797	Cluster_596	Pocillopora_meandrina_HIv1___Sc0000001	8409239	8409797	559	539	217	0.0018552875695732839	-	UGUGAUCACCACUGUCAAAGACAUAUUGG	32	2	530	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8410875-8411343	Cluster_597	Pocillopora_meandrina_HIv1___Sc0000001	8410875	8411343	469	347	164	0.0	-	UCUUCCUUAAUUAUUUUCAGACUGGUCCUA	22	23	291	4	1	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8411850-8412347	Cluster_598	Pocillopora_meandrina_HIv1___Sc0000001	8411850	8412347	498	360	131	0.3638888888888889	.	UUGGAUCUUUGUAUGGAUUCUUGCUGUG	34	119	217	12	6	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8412512-8412930	Cluster_599	Pocillopora_meandrina_HIv1___Sc0000001	8412512	8412930	419	134	73	0.0	-	UGCUACGUUUGACUGACGUUUAUUGGGC	28	5	126	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8413277-8413706	Cluster_600	Pocillopora_meandrina_HIv1___Sc0000001	8413277	8413706	430	311	70	0.21543408360128619	.	UGUUACGAAUCAAGAUCUAUUAAGCUCAAU	123	2	309	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8417245-8418232	Cluster_601	Pocillopora_meandrina_HIv1___Sc0000001	8417245	8418232	988	3377	678	0.04293751850755108	-	UUUUCAAGGAGGAUGUAUCCACUGUCGUU	423	43	3148	23	57	49	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8418536-8418960	Cluster_602	Pocillopora_meandrina_HIv1___Sc0000001	8418536	8418960	425	212	44	0.6886792452830188	.	AAUUGUGAUUUUGUUCAUUGAAUUUAG	47	0	195	1	1	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8419703-8420738	Cluster_603	Pocillopora_meandrina_HIv1___Sc0000001	8419703	8420738	1036	464	215	0.04956896551724138	-	UCCGAUCACGCUUGAAGUAUUUCAGAAAC	47	8	422	2	10	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8667430-8667855	Cluster_604	Pocillopora_meandrina_HIv1___Sc0000001	8667430	8667855	426	93	26	0.978494623655914	+	UGUGUAGAUAUGUCUUUUGGACAGGA	28	0	92	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8680444-8680874	Cluster_605	Pocillopora_meandrina_HIv1___Sc0000001	8680444	8680874	431	9697	383	0.0010312467773538208	-	GCGUUGGUGGUAUAGUGGUGAGCAUAGCU	3314	253	9209	27	40	118	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8689945-8690363	Cluster_606	Pocillopora_meandrina_HIv1___Sc0000001	8689945	8690363	419	109	42	0.0	-	GCCUCUGUAGCGUAAUGGA	47	65	19	11	6	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8708146-8709110	Cluster_607	Pocillopora_meandrina_HIv1___Sc0000001	8708146	8709110	965	12034	490	0.990609938507562	+	UGACGUAUCUCUUCCCCGGGCUAUUGAGC	2985	111	11583	59	152	56	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8725849-8726273	Cluster_608	Pocillopora_meandrina_HIv1___Sc0000001	8725849	8726273	425	116	46	0.0	-	UUUUCUUUUGUUAACCUUAUUACUGAGCC	13	0	116	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8726443-8726870	Cluster_609	Pocillopora_meandrina_HIv1___Sc0000001	8726443	8726870	428	172	45	0.0	-	UGAGUACACUGAUCAGUCGAAUACUGGC	45	1	169	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8740729-8741768	Cluster_610	Pocillopora_meandrina_HIv1___Sc0000001	8740729	8741768	1040	1537	254	0.008458035133376708	-	UCGGUUCCAUGAAUUCAGACAGUUUUG	355	12	1488	10	2	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8744793-8745221	Cluster_611	Pocillopora_meandrina_HIv1___Sc0000001	8744793	8745221	429	150	76	0.006666666666666667	-	UGUACAUCUUCCUGUUGGACACCCUGUUC	19	1	143	0	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8814853-8815264	Cluster_612	Pocillopora_meandrina_HIv1___Sc0000001	8814853	8815264	412	102	55	0.0	-	UUGAACUCGACCCAGUCA	10	13	86	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8852221-8852908	Cluster_613	Pocillopora_meandrina_HIv1___Sc0000001	8852221	8852908	688	569	194	0.005272407732864675	-	UCACAAACUGGAAAGUUAAGGGUGCAGGAG	102	3	555	1	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8852947-8853376	Cluster_614	Pocillopora_meandrina_HIv1___Sc0000001	8852947	8853376	430	545	96	0.03669724770642202	-	UAAAGCAAGACAACUAACUAGAAUGCGGUU	300	30	476	4	4	7	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8856156-8856583	Cluster_615	Pocillopora_meandrina_HIv1___Sc0000001	8856156	8856583	428	90	34	0.0	-	UGAAUCAACAAUAUAACAGAAACUCGUG	32	0	88	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8857011-8857439	Cluster_616	Pocillopora_meandrina_HIv1___Sc0000001	8857011	8857439	429	128	43	0.0	-	UCCGAACUUUCCUGGUGUUGAUAGCCACA	27	2	125	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8858958-8859384	Cluster_617	Pocillopora_meandrina_HIv1___Sc0000001	8858958	8859384	427	149	54	0.0	-	UGCCAACGAUCUUCGGUCACGGGGAGCCA	37	1	141	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8861032-8861837	Cluster_618	Pocillopora_meandrina_HIv1___Sc0000001	8861032	8861837	806	671	261	0.37853949329359166	.	UCCGUAAUCUUGAAAUAUCUGAAUUCGCA	64	15	619	13	2	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8863493-8864217	Cluster_619	Pocillopora_meandrina_HIv1___Sc0000001	8863493	8864217	725	424	196	0.0660377358490566	-	UGAUGAUCUUGAAUUUUGGCGCUCCCAGA	34	7	399	2	1	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8867678-8868103	Cluster_620	Pocillopora_meandrina_HIv1___Sc0000001	8867678	8868103	426	132	51	0.0	-	UGAGUAAAGCUUCUGAUAUGAUAUGGC	28	2	124	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8870437-8870957	Cluster_621	Pocillopora_meandrina_HIv1___Sc0000001	8870437	8870957	521	404	126	0.0	-	CAUGUGCUGAUUUCUGGUCUUAAAAUGGU	107	7	391	1	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9727492-9728055	Cluster_622	Pocillopora_meandrina_HIv1___Sc0000001	9727492	9728055	564	407	194	0.0	-	UAAAAAGCCUGGACCGAGCAAUAUGAAAUU	20	2	388	3	9	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9729005-9729434	Cluster_623	Pocillopora_meandrina_HIv1___Sc0000001	9729005	9729434	430	463	171	0.0	-	UGUUUCCAAUCGAUUCAGCGUGGCUGUUUU	60	4	441	2	3	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9769282-9770303	Cluster_624	Pocillopora_meandrina_HIv1___Sc0000001	9769282	9770303	1022	424	201	0.9764150943396226	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	43	7	396	2	5	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9819040-9819870	Cluster_625	Pocillopora_meandrina_HIv1___Sc0000001	9819040	9819870	831	1624	145	0.01600985221674877	-	UUCAUGCUCUUGUUGUUCGACUGAACAAA	478	30	1564	3	8	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9828736-9829165	Cluster_626	Pocillopora_meandrina_HIv1___Sc0000001	9828736	9829165	430	134	46	0.029850746268656716	-	UGAAUAGCAUAACUGAUGAACUACGUG	19	0	132	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9992821-9993242	Cluster_627	Pocillopora_meandrina_HIv1___Sc0000001	9992821	9993242	422	134	73	0.8208955223880597	+	UAACAGCUUAAGACGCGAACGAG	19	14	35	16	10	39	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10374967-10375503	Cluster_628	Pocillopora_meandrina_HIv1___Sc0000001	10374967	10375503	537	3578	475	0.9997205142537731	+	CACUGGAUCGAGGGAAACCAUGAAUUU	632	669	1737	111	537	361	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10500526-10500944	Cluster_629	Pocillopora_meandrina_HIv1___Sc0000001	10500526	10500944	419	92	31	0.22826086956521738	.	UGAUAACUUGUACGAGUACCGUUUACA	38	2	79	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10501153-10501570	Cluster_630	Pocillopora_meandrina_HIv1___Sc0000001	10501153	10501570	418	155	81	0.7483870967741936	.	UUCUUUCCUUUGGUGCCUUUCUAUGGUU	11	4	123	5	3	2	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10532259-10532801	Cluster_631	Pocillopora_meandrina_HIv1___Sc0000001	10532259	10532801	543	1540	232	0.04025974025974026	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	321	9	1494	2	11	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10534703-10536306	Cluster_632	Pocillopora_meandrina_HIv1___Sc0000001	10534703	10536306	1604	5457	991	0.08905992303463442	-	UGGGAAACGGCUGUACUCGUCUAUGACG	639	31	5109	15	59	72	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10536547-10536974	Cluster_633	Pocillopora_meandrina_HIv1___Sc0000001	10536547	10536974	428	189	60	0.037037037037037035	-	UGAUUAAGAACGAUAAACUGGAACGUG	68	2	179	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10605374-10605803	Cluster_634	Pocillopora_meandrina_HIv1___Sc0000001	10605374	10605803	430	308	103	0.6136363636363636	.	UGCAUCUUCACUGCCACCUACAUUCUGUGU	79	2	263	2	0	3	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10674379-10675151	Cluster_635	Pocillopora_meandrina_HIv1___Sc0000001	10674379	10675151	773	911	236	0.07683863885839737	-	UGCUGUAUUUAAUUCUUCGAUCUUCUUAC	127	16	818	1	9	53	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10678512-10678939	Cluster_636	Pocillopora_meandrina_HIv1___Sc0000001	10678512	10678939	428	339	102	0.04424778761061947	-	UAAGACAUUGGCAUACUUGACAUACA	62	3	321	3	1	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10704605-10705792	Cluster_637	Pocillopora_meandrina_HIv1___Sc0000001	10704605	10705792	1188	3463	718	0.32370776783136007	.	UAUUUCAUCUUUGUCCACUGCGUGCCAA	460	14	3232	7	15	81	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10706036-10706594	Cluster_638	Pocillopora_meandrina_HIv1___Sc0000001	10706036	10706594	559	486	221	0.12345679012345678	-	UAAGUGAACAGUUUUUGACAACCAACGGU	19	8	456	2	7	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10706958-10707451	Cluster_639	Pocillopora_meandrina_HIv1___Sc0000001	10706958	10707451	494	540	182	0.07407407407407407	-	UGAAUCCGUAGAAAAUGCUUUGCUGAGU	50	5	499	9	0	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10709456-10710270	Cluster_640	Pocillopora_meandrina_HIv1___Sc0000001	10709456	10710270	815	338	104	0.005917159763313609	-	UGCGUCGAUUUGUUCAACCCAAUGGAGAGC	60	1	333	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10722865-10723272	Cluster_641	Pocillopora_meandrina_HIv1___Sc0000001	10722865	10723272	408	84	45	0.0	-	UGACGAUUUUCGCGGCUCGAUUUUGU	9	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10737769-10739507	Cluster_642	Pocillopora_meandrina_HIv1___Sc0000001	10737769	10739507	1739	2776	1069	0.03818443804034582	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	98	16	2646	11	27	42	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10743364-10744210	Cluster_643	Pocillopora_meandrina_HIv1___Sc0000001	10743364	10744210	847	863	253	0.013904982618771726	-	UGCUAACACUUGUAGUCUGACCAGCCUUU	116	1	851	0	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10744526-10745157	Cluster_644	Pocillopora_meandrina_HIv1___Sc0000001	10744526	10745157	632	391	174	0.06649616368286446	-	UCUUCUGUUUGUAAGUCUGCUCCGUCUGC	24	1	362	2	0	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10746082-10746505	Cluster_645	Pocillopora_meandrina_HIv1___Sc0000001	10746082	10746505	424	145	80	0.027586206896551724	-	UAACUCACCGUGACUUUAUACACCUUCUUU	25	2	141	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10746515-10746934	Cluster_646	Pocillopora_meandrina_HIv1___Sc0000001	10746515	10746934	420	233	154	0.03862660944206009	-	UGUGCUCUGUCAACCUGUACUGGCUUUC	8	6	204	0	2	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10747636-10748066	Cluster_647	Pocillopora_meandrina_HIv1___Sc0000001	10747636	10748066	431	298	63	0.0	-	UAGGAUUUAUUUGAGAUGCCCGUACGCUCUU	131	0	292	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10748750-10749587	Cluster_648	Pocillopora_meandrina_HIv1___Sc0000001	10748750	10749587	838	903	247	0.9634551495016611	+	UGAUUUCGCGUGCUCAACUCCGAUAAGAGC	151	2	891	2	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10763282-10763715	Cluster_649	Pocillopora_meandrina_HIv1___Sc0000001	10763282	10763715	434	1266	244	0.018957345971563982	-	UAUCUUCUGUAUGAUUUGGCUCGGUUGA	266	8	1208	27	5	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10771285-10771715	Cluster_650	Pocillopora_meandrina_HIv1___Sc0000001	10771285	10771715	431	164	52	0.006097560975609756	-	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	71	1	161	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10779540-10779965	Cluster_651	Pocillopora_meandrina_HIv1___Sc0000001	10779540	10779965	426	164	83	0.036585365853658534	-	UAACCGUAGCUCUGCUUCAAAUCUUUAACGU	19	0	158	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10783416-10784774	Cluster_652	Pocillopora_meandrina_HIv1___Sc0000001	10783416	10784774	1359	2641	775	0.32184778492995075	.	UCCGGAUCUUUUCUUGAACAAACAAAGUUU	149	28	2430	10	22	52	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10785296-10785725	Cluster_653	Pocillopora_meandrina_HIv1___Sc0000001	10785296	10785725	430	159	42	0.006289308176100629	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	31	1	157	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10789786-10790294	Cluster_654	Pocillopora_meandrina_HIv1___Sc0000001	10789786	10790294	509	1950	278	0.05897435897435897	-	UGAUUUCUGUAUUUAGUGUUGGCUGAUAC	730	4	1860	3	20	12	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10792415-10792844	Cluster_655	Pocillopora_meandrina_HIv1___Sc0000001	10792415	10792844	430	116	29	0.11206896551724138	-	UAGGAAAAGAUAUACACUACAAAGAAAAGU	63	2	114	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10824346-10824773	Cluster_656	Pocillopora_meandrina_HIv1___Sc0000001	10824346	10824773	428	81	26	0.9876543209876543	+	UCCUCGGUAGUAUGGUGGUGAGUAUCCC	21	4	75	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10844844-10845261	Cluster_657	Pocillopora_meandrina_HIv1___Sc0000001	10844844	10845261	418	178	18	0.0056179775280898875	-	GUUUCUGUAGUGUAGUGA	73	176	0	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10847770-10848195	Cluster_658	Pocillopora_meandrina_HIv1___Sc0000001	10847770	10848195	426	90	25	0.9777777777777777	+	GGCCUGUUGGUCUAGUGGCAUGAUUCU	47	4	85	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10853559-10853976	Cluster_659	Pocillopora_meandrina_HIv1___Sc0000001	10853559	10853976	418	80	22	0.0	-	GGUCCGUUAGCUCAGUCA	43	73	0	6	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10857028-10857496	Cluster_660	Pocillopora_meandrina_HIv1___Sc0000001	10857028	10857496	469	1125	216	1.0	+	CGCGGGAGACCGGGGUUCGAUUCCCCG	247	54	989	5	11	54	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10862634-10863063	Cluster_661	Pocillopora_meandrina_HIv1___Sc0000001	10862634	10863063	430	4846	140	0.0	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	1690	700	4118	4	4	17	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10871432-10871859	Cluster_662	Pocillopora_meandrina_HIv1___Sc0000001	10871432	10871859	428	150	31	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	60	0	144	0	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10906237-10906664	Cluster_663	Pocillopora_meandrina_HIv1___Sc0000001	10906237	10906664	428	86	23	0.0	-	UCCUCGGUAGUAUAGCGGUGAGUAUCCC	25	6	79	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10906801-10907226	Cluster_664	Pocillopora_meandrina_HIv1___Sc0000001	10906801	10907226	426	156	70	0.0	-	CGCGGGAGACCGGGGUUCGAUUCCCCG	24	4	137	2	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11002489-11002914	Cluster_665	Pocillopora_meandrina_HIv1___Sc0000001	11002489	11002914	426	77	35	0.0	-	UUCUCGGUAGUAUAGUGGUGAGUAUCCC	23	4	69	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11025769-11026190	Cluster_666	Pocillopora_meandrina_HIv1___Sc0000001	11025769	11026190	422	258	41	1.0	+	UCGACUCCCGGACAGGCCCCCA	93	85	3	26	104	38	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11038843-11039272	Cluster_667	Pocillopora_meandrina_HIv1___Sc0000001	11038843	11039272	430	654	92	0.009174311926605505	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	167	125	515	3	6	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11189266-11189748	Cluster_668	Pocillopora_meandrina_HIv1___Sc0000001	11189266	11189748	483	344	169	0.8052325581395349	+	UCAAAAUCGUAGCUUUACAGACGGCCAUU	15	12	252	10	5	19	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11198168-11198583	Cluster_669	Pocillopora_meandrina_HIv1___Sc0000001	11198168	11198583	416	76	1	1.0	+	UUCCGAGGUCGCGGUA	76	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11270078-11270492	Cluster_670	Pocillopora_meandrina_HIv1___Sc0000001	11270078	11270492	415	172	90	0.9244186046511628	+	UGCGAAUCUGAAAAUUGGACGGAGAGC	24	3	156	1	6	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11270720-11271147	Cluster_671	Pocillopora_meandrina_HIv1___Sc0000001	11270720	11271147	428	321	167	0.8566978193146417	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	34	1	272	1	4	18	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11271185-11272459	Cluster_672	Pocillopora_meandrina_HIv1___Sc0000001	11271185	11272459	1275	4209	790	0.9660251841292469	+	UGACUCGUCACUUUGUCUUGCUUAAGCA	661	14	3944	6	18	28	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11273324-11274825	Cluster_673	Pocillopora_meandrina_HIv1___Sc0000001	11273324	11274825	1502	11830	920	0.9744716821639898	+	UAAGAUUUACACACUGAUCGACCAUGU	5080	35	11611	12	20	78	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11398900-11399348	Cluster_674	Pocillopora_meandrina_HIv1___Sc0000001	11398900	11399348	449	404	104	0.9876237623762376	+	UGUAUGUCUUUCUCUGCGAUUUGCUGAA	41	5	365	2	1	22	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11431674-11432104	Cluster_675	Pocillopora_meandrina_HIv1___Sc0000001	11431674	11432104	431	341	155	0.05571847507331378	-	UGAUAACUGUACUCUUGAAAUUCAUCG	18	3	325	1	3	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11432119-11432547	Cluster_676	Pocillopora_meandrina_HIv1___Sc0000001	11432119	11432547	429	239	132	0.10460251046025104	-	UAUCCUUAAUCUUGAUGGCUCGAGACGU	11	8	219	0	0	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11435203-11435632	Cluster_677	Pocillopora_meandrina_HIv1___Sc0000001	11435203	11435632	430	97	30	0.010309278350515464	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	26	1	96	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11568579-11568995	Cluster_678	Pocillopora_meandrina_HIv1___Sc0000001	11568579	11568995	417	105	56	0.9333333333333333	+	AAGGGUGAAAGGGCUGACGU	8	62	0	28	9	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11620987-11621590	Cluster_679	Pocillopora_meandrina_HIv1___Sc0000001	11620987	11621590	604	821	269	0.6967113276492083	.	UACGCCGAGUAAUUUUGCAUGCUGGACAACC	64	9	719	7	14	26	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11725732-11726171	Cluster_680	Pocillopora_meandrina_HIv1___Sc0000001	11725732	11726171	440	11069	496	0.0004517119884361731	-	UCGACUCCCGGUAUGGGAACCA	4597	870	1832	2616	4830	502	419	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11733488-11733917	Cluster_681	Pocillopora_meandrina_HIv1___Sc0000001	11733488	11733917	430	147	65	0.047619047619047616	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	27	0	140	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11842953-11843395	Cluster_682	Pocillopora_meandrina_HIv1___Sc0000001	11842953	11843395	443	252	123	0.7698412698412699	.	UGCUAAGUUUACUCCUCCGUCUGGGU	20	4	183	6	24	27	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12103184-12104139	Cluster_683	Pocillopora_meandrina_HIv1___Sc0000001	12103184	12104139	956	671	299	0.8926974664679582	+	UGUGUUCAGUGUCACUAGGUCUUUUAC	47	6	641	4	2	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12104175-12104915	Cluster_684	Pocillopora_meandrina_HIv1___Sc0000001	12104175	12104915	741	5415	460	0.9855955678670361	+	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	3008	22	5264	13	36	35	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12266632-12267155	Cluster_685	Pocillopora_meandrina_HIv1___Sc0000001	12266632	12267155	524	1192	306	0.05453020134228188	-	UGAGUAAAUUUUCUUUGAUGGUCGUCGA	173	54	1092	2	8	12	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12269284-12269845	Cluster_686	Pocillopora_meandrina_HIv1___Sc0000001	12269284	12269845	562	464	202	0.04956896551724138	-	UAGGUGUUAUACUGUCUCUUGAUUUGG	46	36	383	4	11	22	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12356138-12357358	Cluster_687	Pocillopora_meandrina_HIv1___Sc0000001	12356138	12357358	1221	2221	695	0.11706438541197658	-	UGAUUACAGUGGCCUUCGAUGCCUGCAGGGC	162	19	2044	19	29	57	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12435335-12435765	Cluster_688	Pocillopora_meandrina_HIv1___Sc0000001	12435335	12435765	431	373	123	0.9651474530831099	+	UUGGGUACUGGUGCACUGG	68	87	259	1	4	16	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12435831-12436321	Cluster_689	Pocillopora_meandrina_HIv1___Sc0000001	12435831	12436321	491	1122	231	0.8475935828877005	+	UAAUGGGAAAACGAGAACAGCGUG	143	14	586	18	13	139	352	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12460754-12461252	Cluster_690	Pocillopora_meandrina_HIv1___Sc0000001	12460754	12461252	499	249	97	0.04417670682730924	-	UGGACAAACAGCAAUAUCACUACAAAGCUU	25	4	227	4	2	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12562726-12563322	Cluster_691	Pocillopora_meandrina_HIv1___Sc0000001	12562726	12563322	597	5694	462	0.0024587284861257463	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	890	8	5646	4	7	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12578213-12578660	Cluster_692	Pocillopora_meandrina_HIv1___Sc0000001	12578213	12578660	448	368	88	0.5135869565217391	.	UGUCCACCCCCCACCGGCUGUC	61	17	249	14	71	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12716205-12718189	Cluster_693	Pocillopora_meandrina_HIv1___Sc0000001	12716205	12718189	1985	4731	1460	0.22215176495455508	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	241	58	3982	35	27	156	473	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12719606-12720799	Cluster_694	Pocillopora_meandrina_HIv1___Sc0000001	12719606	12720799	1194	3281	842	0.7653154526059128	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	626	23	2939	13	171	39	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12750169-12750597	Cluster_695	Pocillopora_meandrina_HIv1___Sc0000001	12750169	12750597	429	99	32	0.98989898989899	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	41	1	97	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12752863-12753271	Cluster_696	Pocillopora_meandrina_HIv1___Sc0000001	12752863	12753271	409	74	37	0.24324324324324326	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	17	1	70	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12754673-12755102	Cluster_697	Pocillopora_meandrina_HIv1___Sc0000001	12754673	12755102	430	311	38	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	132	0	311	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12800573-12801010	Cluster_698	Pocillopora_meandrina_HIv1___Sc0000001	12800573	12801010	438	418	182	0.9258373205741627	+	UGAGUUGUCGUGAAGCGUGUGCAGGCAC	21	7	388	2	3	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12867505-12868303	Cluster_699	Pocillopora_meandrina_HIv1___Sc0000001	12867505	12868303	799	2074	405	0.20009643201542912	.	UAGGAUAUAUCACUUGCGUAAUUUACAACA	265	78	1858	20	48	32	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12872949-12873376	Cluster_700	Pocillopora_meandrina_HIv1___Sc0000001	12872949	12873376	428	113	31	0.9646017699115044	+	GUGGGAUAGAGCCUUGGAAUUUUGGACC	38	1	112	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12925240-12925665	Cluster_701	Pocillopora_meandrina_HIv1___Sc0000001	12925240	12925665	426	97	20	0.9690721649484536	+	UACCAUAGAACUUUCCGAGACAUUUC	45	1	92	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13141983-13142410	Cluster_702	Pocillopora_meandrina_HIv1___Sc0000001	13141983	13142410	428	99	7	0.98989898989899	+	UACCAAGGUCUUGUAGUCUAGUACAACU	60	1	98	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13143902-13144326	Cluster_703	Pocillopora_meandrina_HIv1___Sc0000001	13143902	13144326	425	236	122	0.6483050847457628	.	UGCGAAAUGAACUCAGAGCUUUCUG	42	4	213	3	3	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13144672-13145098	Cluster_704	Pocillopora_meandrina_HIv1___Sc0000001	13144672	13145098	427	472	40	1.0	+	UGAUUGGUGCAUUUCGAUCCUUGCUGC	370	0	468	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13148777-13149204	Cluster_705	Pocillopora_meandrina_HIv1___Sc0000001	13148777	13149204	428	101	9	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	68	0	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13360013-13360439	Cluster_706	Pocillopora_meandrina_HIv1___Sc0000001	13360013	13360439	427	141	54	0.9716312056737588	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	32	3	135	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13536986-13537435	Cluster_707	Pocillopora_meandrina_HIv1___Sc0000001	13536986	13537435	450	436	206	0.027522935779816515	-	UCUUUCGUCUGUUGUCGAUAAAUGAGAGC	27	8	410	4	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13822443-13822984	Cluster_708	Pocillopora_meandrina_HIv1___Sc0000001	13822443	13822984	542	1301	259	0.5457340507302075	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	205	6	1230	12	3	19	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14013921-14014346	Cluster_709	Pocillopora_meandrina_HIv1___Sc0000001	14013921	14014346	426	245	101	0.22857142857142856	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	29	5	224	1	5	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14014599-14015004	Cluster_710	Pocillopora_meandrina_HIv1___Sc0000001	14014599	14015004	406	201	142	0.22885572139303484	.	UUUUUUACCUCCAUCCGGCGAUUGUAACC	11	5	171	3	5	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14015157-14015842	Cluster_711	Pocillopora_meandrina_HIv1___Sc0000001	14015157	14015842	686	448	260	0.22321428571428573	.	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	32	4	368	5	11	21	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14017598-14018025	Cluster_712	Pocillopora_meandrina_HIv1___Sc0000001	14017598	14018025	428	187	67	0.0481283422459893	-	UAUACACGUUUAGGAUCUUCAUUUUUGA	91	2	183	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14502165-14502594	Cluster_713	Pocillopora_meandrina_HIv1___Sc0000001	14502165	14502594	430	343	58	0.014577259475218658	-	GUGCUGCAGAUCUAAGGUUCAAUUAUCUU	113	5	328	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14757192-14757869	Cluster_714	Pocillopora_meandrina_HIv1___Sc0000001	14757192	14757869	678	8086	548	0.0033391046252782587	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2153	7	7986	5	37	20	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14758029-14758432	Cluster_715	Pocillopora_meandrina_HIv1___Sc0000001	14758029	14758432	404	368	233	0.26902173913043476	.	UCUUUCAGUCACUUAGAAGCCUCCAGG	13	9	292	2	10	17	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14787117-14787542	Cluster_716	Pocillopora_meandrina_HIv1___Sc0000001	14787117	14787542	426	173	73	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	22	3	162	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14804465-14805185	Cluster_717	Pocillopora_meandrina_HIv1___Sc0000001	14804465	14805185	721	731	148	0.7674418604651163	.	UGAAACUCUGAUCUGAAAACAUUUGUC	126	13	690	8	4	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14844025-14844488	Cluster_718	Pocillopora_meandrina_HIv1___Sc0000001	14844025	14844488	464	2960	125	0.995945945945946	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	1493	0	2954	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14871238-14871877	Cluster_719	Pocillopora_meandrina_HIv1___Sc0000001	14871238	14871877	640	272	126	0.3272058823529412	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	49	1	220	5	7	18	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14937302-14937732	Cluster_720	Pocillopora_meandrina_HIv1___Sc0000001	14937302	14937732	431	2034	171	0.0019665683382497543	-	GCAGCAUCUGUACUACGCCUCGCACUCAGU	978	100	1825	23	59	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15033386-15033806	Cluster_721	Pocillopora_meandrina_HIv1___Sc0000001	15033386	15033806	421	80	28	0.0375	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	30	0	78	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15035106-15035533	Cluster_722	Pocillopora_meandrina_HIv1___Sc0000001	15035106	15035533	428	207	67	0.014492753623188406	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	40	1	196	0	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15227525-15228110	Cluster_723	Pocillopora_meandrina_HIv1___Sc0000001	15227525	15228110	586	815	252	0.0834355828220859	-	UGGAUUCUAUGACCUGAAUUGAGCA	107	7	787	4	2	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15228296-15228850	Cluster_724	Pocillopora_meandrina_HIv1___Sc0000001	15228296	15228850	555	650	165	0.29384615384615387	.	CGCUAUGUGACAUCCCUGGACAAAGUUCC	136	6	572	7	1	23	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15230069-15230772	Cluster_725	Pocillopora_meandrina_HIv1___Sc0000001	15230069	15230772	704	1076	285	0.8801115241635687	+	UAUAAUGGCACUUUCCUAUCUUCUGGCC	82	4	1010	4	7	14	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15257323-15258290	Cluster_726	Pocillopora_meandrina_HIv1___Sc0000001	15257323	15258290	968	1036	369	0.7712355212355212	.	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	123	23	947	9	8	20	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15258356-15258766	Cluster_727	Pocillopora_meandrina_HIv1___Sc0000001	15258356	15258766	411	205	129	0.9170731707317074	+	UAGAGACUUUAAGUACUGGAAAUACUU	12	6	179	6	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15302473-15302902	Cluster_728	Pocillopora_meandrina_HIv1___Sc0000001	15302473	15302902	430	200	19	1.0	+	AAAGAAAGAAGUACCUAACUGAACUAGAUG	123	0	199	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15440801-15442329	Cluster_729	Pocillopora_meandrina_HIv1___Sc0000001	15440801	15442329	1529	3801	778	0.9552749276506183	+	UGCGCAAUCGUGAUCAAAAAUAUCCUC	258	43	3645	18	14	30	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15491596-15492021	Cluster_730	Pocillopora_meandrina_HIv1___Sc0000001	15491596	15492021	426	198	46	0.005050505050505051	-	UUCCAUCACUGUUCUAGGUAACAUUA	89	0	197	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15572839-15573266	Cluster_731	Pocillopora_meandrina_HIv1___Sc0000001	15572839	15573266	428	128	41	1.0	+	GUGGCGAAAACUCUUGACAAGAUCCUGUCU	32	12	101	5	9	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15682587-15683052	Cluster_732	Pocillopora_meandrina_HIv1___Sc0000001	15682587	15683052	466	469	154	0.8614072494669509	+	UGUGAUCUUAAAGAAUUGACGGGUUUA	57	2	451	5	2	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15688821-15689251	Cluster_733	Pocillopora_meandrina_HIv1___Sc0000001	15688821	15689251	431	162	64	0.7469135802469136	.	UAAGUUACAUUAACAAUUUUGAGCCUUUUGC	24	3	147	2	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15704077-15704486	Cluster_734	Pocillopora_meandrina_HIv1___Sc0000001	15704077	15704486	410	199	115	0.4120603015075377	.	ACUGGAUACAAAACUGCUCGAUGC	28	0	143	2	5	8	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15704561-15705308	Cluster_735	Pocillopora_meandrina_HIv1___Sc0000001	15704561	15705308	748	538	214	0.040892193308550186	-	UGAGAUUUACGAUUGCAUAUAUUAAGUG	52	3	518	1	0	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15740066-15740496	Cluster_736	Pocillopora_meandrina_HIv1___Sc0000001	15740066	15740496	431	956	107	0.0020920502092050207	-	AUGAAUCGGAAAAGAAUUACUUAAUGGGU	272	7	935	2	3	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15810876-15811294	Cluster_737	Pocillopora_meandrina_HIv1___Sc0000001	15810876	15811294	419	200	125	0.14	-	AAAGAUCUGUAGAUUGUUGC	16	110	24	30	18	13	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16038032-16038460	Cluster_738	Pocillopora_meandrina_HIv1___Sc0000001	16038032	16038460	429	193	71	0.08290155440414508	-	AUCACACCAGAACUCCAUUUGCUAGAAGG	68	4	173	2	0	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16073283-16073699	Cluster_739	Pocillopora_meandrina_HIv1___Sc0000001	16073283	16073699	417	131	60	0.22137404580152673	.	AUCGCACCAAAACUCCAUAUGCUAGAAGA	25	3	117	1	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16168785-16169202	Cluster_740	Pocillopora_meandrina_HIv1___Sc0000001	16168785	16169202	418	202	68	0.09900990099009901	-	GCUGCGAUGGCCGAGUGG	59	170	17	1	7	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16206233-16206639	Cluster_741	Pocillopora_meandrina_HIv1___Sc0000001	16206233	16206639	407	149	74	0.47651006711409394	.	GCGACGAGGAGCUUUUUCUUACACAAAAUA	15	6	125	0	5	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16290834-16291251	Cluster_742	Pocillopora_meandrina_HIv1___Sc0000001	16290834	16291251	418	189	134	1.0	+	UGGGACAAGAUUUGCCUGACAUGUAAAU	6	35	101	11	13	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16350383-16350809	Cluster_743	Pocillopora_meandrina_HIv1___Sc0000001	16350383	16350809	427	89	28	0.033707865168539325	-	AGCUGAAGAAACUUCUAUUGAACAUGU	40	1	81	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17078271-17078693	Cluster_744	Pocillopora_meandrina_HIv1___Sc0000001	17078271	17078693	423	1983	127	0.019162884518406455	-	AAGAACACCCAAAAUAGCUGA	682	186	3	805	520	408	61	21	N	miR-9425_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000001:17106031-17106458	Cluster_745	Pocillopora_meandrina_HIv1___Sc0000001	17106031	17106458	428	147	16	0.9931972789115646	+	UUACCAACGUAAUAAAAGUAGAUGACGU	95	1	146	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17293357-17293769	Cluster_746	Pocillopora_meandrina_HIv1___Sc0000001	17293357	17293769	413	107	65	0.0	-	GACGAUGGCAAAAACGUGAACA	11	21	51	8	16	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17567794-17568220	Cluster_747	Pocillopora_meandrina_HIv1___Sc0000001	17567794	17568220	427	184	101	0.016304347826086956	-	AGUACGCAUUGAACUCUAUAGCUGACA	34	35	85	10	16	26	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17658982-17659545	Cluster_748	Pocillopora_meandrina_HIv1___Sc0000001	17658982	17659545	564	1108	213	0.10830324909747292	-	UAUGAUCAAAUACUGGAUUUCCAUCAUGU	290	6	1067	2	3	4	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17698148-17699174	Cluster_749	Pocillopora_meandrina_HIv1___Sc0000001	17698148	17699174	1027	1392	411	0.9978448275862069	+	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	139	14	1362	2	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17775013-17775434	Cluster_750	Pocillopora_meandrina_HIv1___Sc0000001	17775013	17775434	422	94	18	1.0	+	UUUCAUGGAUUGAGUGCUACUC	53	6	0	14	68	3	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17940877-17941425	Cluster_751	Pocillopora_meandrina_HIv1___Sc0000001	17940877	17941425	549	225	46	1.0	+	CCUGUGAAUACUUCUGGCAUUACUCAAGCC	75	0	204	4	2	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17949925-17950374	Cluster_752	Pocillopora_meandrina_HIv1___Sc0000001	17949925	17950374	450	305	102	0.980327868852459	+	UGUAACAUCGUGUGACUUGAACGCUCUUUGC	49	0	291	2	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17956260-17956682	Cluster_753	Pocillopora_meandrina_HIv1___Sc0000001	17956260	17956682	423	140	65	0.05	-	UAGGAAAAUUGAUCUGCUGAGCUAUUUGC	21	7	123	1	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17982143-17982566	Cluster_754	Pocillopora_meandrina_HIv1___Sc0000001	17982143	17982566	424	97	38	1.0	+	UCUCAACUUACCAAAAACUCUACC	22	0	57	1	1	5	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18120359-18120786	Cluster_755	Pocillopora_meandrina_HIv1___Sc0000001	18120359	18120786	428	118	16	0.01694915254237288	-	UACCAAGGUCUUGUAGUCUAGUACAACU	64	0	118	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18480082-18480504	Cluster_756	Pocillopora_meandrina_HIv1___Sc0000001	18480082	18480504	423	301	80	0.023255813953488372	-	ACUAAUUUUUCGUAGCCCUGCCU	35	150	11	34	33	53	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18622873-18623298	Cluster_757	Pocillopora_meandrina_HIv1___Sc0000001	18622873	18623298	426	153	95	0.11764705882352941	-	GUAGUUGAUAGAACUUUACAGGCAGACGU	21	26	89	10	5	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18706029-18706447	Cluster_758	Pocillopora_meandrina_HIv1___Sc0000001	18706029	18706447	419	72	25	1.0	+	UGAAGUCAGGACUGGGAUAAGAGGG	16	13	53	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19145766-19145858	Cluster_759	Pocillopora_meandrina_HIv1___Sc0000001	19145766	19145858	93	6322	255	1.0	+	CGCUCUUAAAAUCUCCUAGCUAU	1605	1316	82	585	1212	2501	626	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000001:19235018-19235447	Cluster_760	Pocillopora_meandrina_HIv1___Sc0000001	19235018	19235447	430	363	29	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	205	1	362	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19237350-19237983	Cluster_761	Pocillopora_meandrina_HIv1___Sc0000001	19237350	19237983	634	3079	371	0.8100032478077298	+	UGUUUCACACUUUACUACAUUCCCUGGU	814	47	2551	9	15	419	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19240560-19240972	Cluster_762	Pocillopora_meandrina_HIv1___Sc0000001	19240560	19240972	413	99	44	0.050505050505050504	-	UCCAUAAGAUCUUUGACAGCUAAAAAGCGG	14	3	93	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19318656-19319210	Cluster_763	Pocillopora_meandrina_HIv1___Sc0000001	19318656	19319210	555	454	131	0.381057268722467	.	CGCUAUGUGACAUCCCUGGACAAAGUUCC	63	3	411	11	2	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19329318-19329746	Cluster_764	Pocillopora_meandrina_HIv1___Sc0000001	19329318	19329746	429	103	31	0.9514563106796117	+	UACAAACAACAGAAUGUUCGAACGGCUCGAC	26	2	97	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19460429-19460910	Cluster_765	Pocillopora_meandrina_HIv1___Sc0000001	19460429	19460910	482	32474	598	0.9999384122682762	+	GGGGGACUAGCUCAGAUGGU	9903	23936	4803	1621	832	1112	170	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19495962-19496440	Cluster_766	Pocillopora_meandrina_HIv1___Sc0000001	19495962	19496440	479	791	262	0.2503160556257901	.	UGGACUUCGGCUCUAAAGGA	146	648	21	70	33	15	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19538058-19538488	Cluster_767	Pocillopora_meandrina_HIv1___Sc0000001	19538058	19538488	431	362	58	0.9972375690607734	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	170	4	358	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19618795-19619966	Cluster_768	Pocillopora_meandrina_HIv1___Sc0000001	19618795	19619966	1172	1831	597	0.9557618787547788	+	UGUGUCUUUCUCUUAGUGCUGUAAGGU	218	10	1751	6	10	18	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19620002-19621069	Cluster_769	Pocillopora_meandrina_HIv1___Sc0000001	19620002	19621069	1068	1014	451	0.9309664694280079	+	UGAUAACUUGCUAUCGAUCGCGGUACU	96	9	961	7	9	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19621503-19622195	Cluster_770	Pocillopora_meandrina_HIv1___Sc0000001	19621503	19622195	693	950	371	0.8410526315789474	+	UGUUCCUUGAAUUCUGCGUGCACAAAGC	189	20	842	8	13	29	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19622523-19623533	Cluster_771	Pocillopora_meandrina_HIv1___Sc0000001	19622523	19623533	1011	2712	761	0.8056784660766961	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	266	19	2229	22	22	104	316	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19640322-19642591	Cluster_772	Pocillopora_meandrina_HIv1___Sc0000001	19640322	19642591	2270	3273	1171	0.9391995111518484	+	UGUGUCUUUCUCUUAGUGCUGUAAGGU	254	46	3055	22	13	51	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19643027-19644113	Cluster_773	Pocillopora_meandrina_HIv1___Sc0000001	19643027	19644113	1087	2660	867	0.8947368421052632	+	UGUUCCUUGAAUUCUGCGUGCACAAAGC	227	55	2394	25	36	72	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19644177-19645055	Cluster_774	Pocillopora_meandrina_HIv1___Sc0000001	19644177	19645055	879	1784	447	0.8452914798206278	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	251	6	1560	6	11	44	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19992950-19993378	Cluster_775	Pocillopora_meandrina_HIv1___Sc0000001	19992950	19993378	429	453	117	0.1346578366445916	-	UGGUUACUGAGGAAGAAAAGAAGU	89	11	262	28	6	15	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19995371-19996074	Cluster_776	Pocillopora_meandrina_HIv1___Sc0000001	19995371	19996074	704	1084	271	0.29612546125461253	.	UUAAGCAUUAUCGAAGGUAACCAGACUG	110	7	924	3	5	53	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20128710-20129245	Cluster_777	Pocillopora_meandrina_HIv1___Sc0000001	20128710	20129245	536	1482	346	0.0	-	AGGGAAGUGUAGCUCAAUUACAUGAGAGUU	166	269	990	60	47	56	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20129986-20130409	Cluster_778	Pocillopora_meandrina_HIv1___Sc0000001	20129986	20130409	424	469	85	0.0	-	AAAACAUGGCUGAUGAGGA	65	344	50	38	18	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20270769-20271189	Cluster_779	Pocillopora_meandrina_HIv1___Sc0000001	20270769	20271189	421	283	120	0.6042402826855123	.	UGUGUCCAAACGUCGGCUUUG	74	127	3	130	20	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20271285-20271710	Cluster_780	Pocillopora_meandrina_HIv1___Sc0000001	20271285	20271710	426	352	187	0.7272727272727273	.	UUUGGACACAUGUGCUGCGAG	35	178	11	129	25	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20331429-20331833	Cluster_781	Pocillopora_meandrina_HIv1___Sc0000001	20331429	20331833	405	109	74	0.0	-	AAGAUGAAGACUCUGUUCACAAGCU	5	26	56	7	10	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20348288-20348707	Cluster_782	Pocillopora_meandrina_HIv1___Sc0000001	20348288	20348707	420	217	141	1.0	+	AGUGGCUGAUCUCAGUGAAAUU	13	38	96	23	23	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20349257-20349659	Cluster_783	Pocillopora_meandrina_HIv1___Sc0000001	20349257	20349659	403	218	158	1.0	+	UUUUCUCUGAUAAUGUUGCUGUA	5	49	96	17	21	17	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20350380-20350797	Cluster_784	Pocillopora_meandrina_HIv1___Sc0000001	20350380	20350797	418	287	192	0.9930313588850174	+	AAAAGUAGUUUGAUUGUUCGGC	8	75	114	24	28	26	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20351612-20352019	Cluster_785	Pocillopora_meandrina_HIv1___Sc0000001	20351612	20352019	408	165	104	0.9939393939393939	+	AUUGCUGUGCCUUUGUAGA	14	68	37	14	26	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20354485-20354907	Cluster_786	Pocillopora_meandrina_HIv1___Sc0000001	20354485	20354907	423	313	184	1.0	+	GACGGUCUGUAUUUUCACUGCA	15	49	127	32	40	37	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20455816-20456244	Cluster_787	Pocillopora_meandrina_HIv1___Sc0000001	20455816	20456244	429	253	41	0.0	-	CCCGAGUUGUCUCCUGUCCGAGGUUCAGU	120	10	237	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20499336-20499904	Cluster_788	Pocillopora_meandrina_HIv1___Sc0000001	20499336	20499904	569	1215	334	0.06666666666666667	-	UCUUCCGGUCUGUUUUCGCUUUUUCUGGA	146	21	1124	7	9	31	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20501232-20502218	Cluster_789	Pocillopora_meandrina_HIv1___Sc0000001	20501232	20502218	987	1932	502	0.012422360248447204	-	UGCUGUAGUUUUUACUUCCGACUGAACAUU	165	6	1896	4	3	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20642790-20643214	Cluster_790	Pocillopora_meandrina_HIv1___Sc0000001	20642790	20643214	425	177	54	0.864406779661017	+	AUUGGUGAAAGAGUAAGAUUCUGGC	63	1	131	3	5	3	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20646624-20647052	Cluster_791	Pocillopora_meandrina_HIv1___Sc0000001	20646624	20647052	429	218	36	0.24770642201834864	.	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	82	0	213	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20647429-20647855	Cluster_792	Pocillopora_meandrina_HIv1___Sc0000001	20647429	20647855	427	261	29	0.08812260536398467	-	UAGUUUGAAAAGAUAUCGCUCAGUG	146	4	241	5	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20971110-20971853	Cluster_793	Pocillopora_meandrina_HIv1___Sc0000001	20971110	20971853	744	338	152	0.9467455621301775	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	43	1	326	1	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20971930-20972341	Cluster_794	Pocillopora_meandrina_HIv1___Sc0000001	20971930	20972341	412	188	109	0.574468085106383	.	ACUGGAUACAAAACUGCUCGAUGC	32	0	130	0	2	8	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20982665-20983085	Cluster_795	Pocillopora_meandrina_HIv1___Sc0000001	20982665	20983085	421	84	3	0.9880952380952381	+	UCUGACGAAGGGCUGACACUU	82	0	0	83	1	0	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21215812-21216293	Cluster_796	Pocillopora_meandrina_HIv1___Sc0000001	21215812	21216293	482	2976	489	0.0	-	CAGCGAUGAUGAAGACUUAGAGUUUUGCU	172	1146	658	288	163	429	292	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21278193-21278618	Cluster_797	Pocillopora_meandrina_HIv1___Sc0000001	21278193	21278618	426	433	107	0.0	-	AUGGUCUUGUGAAUUUUUGCUGGAUA	94	41	178	96	46	22	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21278917-21279466	Cluster_798	Pocillopora_meandrina_HIv1___Sc0000001	21278917	21279466	550	659	273	0.0	-	CUCUGAAUCAGACUUUCAAACAUCA	32	89	356	24	92	56	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21443208-21443619	Cluster_799	Pocillopora_meandrina_HIv1___Sc0000001	21443208	21443619	412	191	155	0.015706806282722512	-	GAUGGAAGCCUUUUAACGAUA	3	42	87	17	20	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21443789-21444189	Cluster_800	Pocillopora_meandrina_HIv1___Sc0000001	21443789	21444189	401	246	184	0.0040650406504065045	-	UCUUGAACGACUGAAGGACGUGUGCCAAC	5	53	115	27	22	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21448381-21448799	Cluster_801	Pocillopora_meandrina_HIv1___Sc0000001	21448381	21448799	419	423	294	0.0	-	CGUGGACUGUCUACGUGAUCUGGACAAGA	8	102	185	40	48	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:43675-44102	Cluster_802	Pocillopora_meandrina_HIv1___Sc0000002	43675	44102	428	369	140	0.94579945799458	+	UCUGUCUCCUCUGUAAUAAUGACACUGA	77	1	351	1	1	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:66073-66501	Cluster_803	Pocillopora_meandrina_HIv1___Sc0000002	66073	66501	429	288	16	0.010416666666666666	-	CGUGUUUGGAUUACGAUCACCUGAAGCGC	193	0	283	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:217180-217606	Cluster_804	Pocillopora_meandrina_HIv1___Sc0000002	217180	217606	427	91	32	0.8571428571428571	+	UAGGAUAUAUCACUUGCGUAAUUUACA	16	2	86	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:242838-243539	Cluster_805	Pocillopora_meandrina_HIv1___Sc0000002	242838	243539	702	291	147	0.9347079037800687	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	27	0	276	2	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:244769-245198	Cluster_806	Pocillopora_meandrina_HIv1___Sc0000002	244769	245198	430	233	126	0.8197424892703863	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	4	207	0	2	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:313284-313712	Cluster_807	Pocillopora_meandrina_HIv1___Sc0000002	313284	313712	429	2325	91	0.00903225806451613	-	UAACUUCAACUAGAUCGAAAUGCUUGUGA	1644	7	2309	4	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:340857-341277	Cluster_808	Pocillopora_meandrina_HIv1___Sc0000002	340857	341277	421	437	298	1.0	+	GCCGAAGAAGAAGAGGACU	10	112	162	51	37	36	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:564384-564854	Cluster_809	Pocillopora_meandrina_HIv1___Sc0000002	564384	564854	471	1443	198	0.7567567567567568	.	UAGGAUAUAUCACUUGCGUAAUUUACA	262	29	1345	4	25	23	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:568138-569331	Cluster_810	Pocillopora_meandrina_HIv1___Sc0000002	568138	569331	1194	1376	557	0.10537790697674419	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	121	11	1285	6	3	27	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:569616-570231	Cluster_811	Pocillopora_meandrina_HIv1___Sc0000002	569616	570231	616	559	301	0.05366726296958855	-	UGCAAGAAGUACUGGGUUCACUGAGACC	22	5	531	1	0	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:570309-571232	Cluster_812	Pocillopora_meandrina_HIv1___Sc0000002	570309	571232	924	647	272	0.04327666151468315	-	UGGUUGUACUCUUAUACUCAAUGAUAUA	83	5	610	5	0	19	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:622207-623333	Cluster_813	Pocillopora_meandrina_HIv1___Sc0000002	622207	623333	1127	830	393	0.8746987951807229	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	52	8	688	4	4	17	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:626450-626878	Cluster_814	Pocillopora_meandrina_HIv1___Sc0000002	626450	626878	429	249	29	1.0	+	UCUGAUGACACUUUGGACUUGGGACUU	104	0	245	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:633884-634302	Cluster_815	Pocillopora_meandrina_HIv1___Sc0000002	633884	634302	419	212	143	0.8113207547169812	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	12	0	193	5	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:634394-634813	Cluster_816	Pocillopora_meandrina_HIv1___Sc0000002	634394	634813	420	296	180	0.9628378378378378	+	UCAGACACGUGGAUACUUGCGAUGAAGU	16	2	282	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:635164-635594	Cluster_817	Pocillopora_meandrina_HIv1___Sc0000002	635164	635594	431	251	121	0.9203187250996016	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	21	2	235	1	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:636324-636752	Cluster_818	Pocillopora_meandrina_HIv1___Sc0000002	636324	636752	429	194	63	0.7216494845360825	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	33	0	157	1	3	1	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:645285-645712	Cluster_819	Pocillopora_meandrina_HIv1___Sc0000002	645285	645712	428	240	31	1.0	+	UGGCUCAACCAACUGAAGUGAAAUAUUC	188	0	236	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:651110-651536	Cluster_820	Pocillopora_meandrina_HIv1___Sc0000002	651110	651536	427	187	81	0.946524064171123	+	UCUGUAGUAAACUGGCUGAUAUUUUC	31	1	175	0	4	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:663356-663783	Cluster_821	Pocillopora_meandrina_HIv1___Sc0000002	663356	663783	428	122	43	1.0	+	UUAUUUGAGAUUUGGGAUAAUGUGUGUUGU	22	0	120	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:675552-675980	Cluster_822	Pocillopora_meandrina_HIv1___Sc0000002	675552	675980	429	182	57	0.0989010989010989	-	UGUUGCUUUACGGAUUUUGAGUUACCUUC	41	1	153	2	1	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:681754-682175	Cluster_823	Pocillopora_meandrina_HIv1___Sc0000002	681754	682175	422	155	97	0.10967741935483871	-	UAAGAUCGUCAUGGCAUCCAAAACAGA	12	2	139	0	2	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:840308-840736	Cluster_824	Pocillopora_meandrina_HIv1___Sc0000002	840308	840736	429	221	124	0.19457013574660634	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	30	3	189	1	2	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:841966-842669	Cluster_825	Pocillopora_meandrina_HIv1___Sc0000002	841966	842669	704	264	142	0.09090909090909091	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	23	2	252	0	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:961248-961779	Cluster_826	Pocillopora_meandrina_HIv1___Sc0000002	961248	961779	532	366	167	1.0	+	AAGCUGAGUUUCCAAUGCCUGGCAUGG	42	63	224	15	14	24	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:987966-988384	Cluster_827	Pocillopora_meandrina_HIv1___Sc0000002	987966	988384	419	99	5	1.0	+	GUGCUGGGUAACUUUGGUG	51	98	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1019617-1020044	Cluster_828	Pocillopora_meandrina_HIv1___Sc0000002	1019617	1020044	428	171	67	0.029239766081871343	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	39	1	165	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1170901-1171329	Cluster_829	Pocillopora_meandrina_HIv1___Sc0000002	1170901	1171329	429	300	59	0.8566666666666667	+	CAGUACCUAAAUCUACAAAGCUUGACCGC	135	8	287	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1393700-1394126	Cluster_830	Pocillopora_meandrina_HIv1___Sc0000002	1393700	1394126	427	147	67	0.6666666666666666	.	CCUGGUCUUAAAUUCAUACGUUGUGAUA	23	1	112	0	1	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1394760-1395832	Cluster_831	Pocillopora_meandrina_HIv1___Sc0000002	1394760	1395832	1073	1006	481	0.21669980119284293	.	UGGGUAUACUGAGAAUAGAAAUUGGCC	65	13	903	5	12	29	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1451343-1453080	Cluster_832	Pocillopora_meandrina_HIv1___Sc0000002	1451343	1453080	1738	2822	1119	0.9532246633593197	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	89	19	2682	9	26	31	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1457990-1458924	Cluster_833	Pocillopora_meandrina_HIv1___Sc0000002	1457990	1458924	935	1000	364	0.042	-	UAAUGACUUCAGAGUAGACAGAGACGGU	69	9	966	7	2	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1470195-1470624	Cluster_834	Pocillopora_meandrina_HIv1___Sc0000002	1470195	1470624	430	487	55	0.06365503080082136	-	UUAACUCCACGGUGCCAAUGACUUUCUU	137	2	471	2	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1576491-1576920	Cluster_835	Pocillopora_meandrina_HIv1___Sc0000002	1576491	1576920	430	319	72	0.9937304075235109	+	UAUUUGGAAAAGUGGUUCCCAAGACUGUG	78	16	296	3	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1603262-1603679	Cluster_836	Pocillopora_meandrina_HIv1___Sc0000002	1603262	1603679	418	121	61	0.9173553719008265	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	23	2	110	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1603755-1604878	Cluster_837	Pocillopora_meandrina_HIv1___Sc0000002	1603755	1604878	1124	718	336	0.9317548746518106	+	UGUAUCUUCUUAGGCCAGCAUGUGUACUGA	57	8	675	1	4	10	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1605183-1605789	Cluster_838	Pocillopora_meandrina_HIv1___Sc0000002	1605183	1605789	607	428	168	0.9369158878504673	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	44	0	411	3	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1730182-1730612	Cluster_839	Pocillopora_meandrina_HIv1___Sc0000002	1730182	1730612	431	360	65	0.9527777777777777	+	UAGGUAAAGUCUUUCUGUUGACAGAGUU	133	3	351	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1795902-1796330	Cluster_840	Pocillopora_meandrina_HIv1___Sc0000002	1795902	1796330	429	187	40	0.6310160427807486	.	AUGACGAAUAUGUUUACACGGUAGGCGGU	69	1	173	4	7	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1796433-1796862	Cluster_841	Pocillopora_meandrina_HIv1___Sc0000002	1796433	1796862	430	401	94	0.9775561097256857	+	AGCGAUUAGAAGAGCUAGACAUCAUCGAGA	131	5	318	2	7	28	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1991286-1992122	Cluster_842	Pocillopora_meandrina_HIv1___Sc0000002	1991286	1992122	837	606	248	0.9405940594059405	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	47	1	584	2	2	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1993635-1994062	Cluster_843	Pocillopora_meandrina_HIv1___Sc0000002	1993635	1994062	428	239	132	0.2510460251046025	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	15	0	227	0	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2177166-2177595	Cluster_844	Pocillopora_meandrina_HIv1___Sc0000002	2177166	2177595	430	3384	106	1.0	+	UUCUCUCGAACAUUUUACUAUUUAGGUA	1932	12	3286	1	7	67	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2251895-2252814	Cluster_845	Pocillopora_meandrina_HIv1___Sc0000002	2251895	2252814	920	918	306	0.21568627450980393	.	UUCAACGUGUGUAGGACCUUUUUCAGCC	53	4	844	10	6	21	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2253914-2254342	Cluster_846	Pocillopora_meandrina_HIv1___Sc0000002	2253914	2254342	429	172	20	0.005813953488372093	-	UGAUUCGACUGCUGUGUCCAUCUCGACUG	27	0	171	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2273799-2274208	Cluster_847	Pocillopora_meandrina_HIv1___Sc0000002	2273799	2274208	410	128	58	0.9375	+	UACUCGAGGAGUUUUGACUGAACGCGCG	43	0	120	1	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2307761-2308184	Cluster_848	Pocillopora_meandrina_HIv1___Sc0000002	2307761	2308184	424	249	140	0.3453815261044177	.	UGCAAACUUUAGCAAAGUGUCCGACGUG	11	1	218	1	2	5	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2308601-2309649	Cluster_849	Pocillopora_meandrina_HIv1___Sc0000002	2308601	2309649	1049	901	263	0.3196448390677026	.	UGAUACAAUUCUGGCGCUGAGCAAAUGCC	63	6	765	5	3	45	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2310173-2310599	Cluster_850	Pocillopora_meandrina_HIv1___Sc0000002	2310173	2310599	427	200	73	0.565	.	AAUGGUAUUAAGCAUCGACGUGUA	18	0	168	0	1	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2310751-2311179	Cluster_851	Pocillopora_meandrina_HIv1___Sc0000002	2310751	2311179	429	187	32	0.10160427807486631	-	UUCGACUGCUGUGUCCAUCUCGACUGAAGC	25	0	182	0	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2471144-2471658	Cluster_852	Pocillopora_meandrina_HIv1___Sc0000002	2471144	2471658	515	309	218	0.009708737864077669	-	UUGACAGGAUAUGUGCACUAGCUUAUACU	7	51	192	9	20	13	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2472280-2473102	Cluster_853	Pocillopora_meandrina_HIv1___Sc0000002	2472280	2473102	823	716	500	0.0013966480446927375	-	CUGAUGAAGCUGUAGCUUAUGGUGCA	14	151	329	52	44	65	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2474111-2474556	Cluster_854	Pocillopora_meandrina_HIv1___Sc0000002	2474111	2474556	446	375	134	0.0026666666666666666	-	GUCUGUCAGAUCGGACCAGAAACACUGGCC	94	31	271	5	17	38	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2630920-2631380	Cluster_855	Pocillopora_meandrina_HIv1___Sc0000002	2630920	2631380	461	769	167	0.918075422626788	+	UUGUUGAUUUUCUCUUGAAGAGUUUGGA	104	25	716	6	2	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2853315-2853747	Cluster_856	Pocillopora_meandrina_HIv1___Sc0000002	2853315	2853747	433	476	75	0.9810924369747899	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	123	1	470	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2853977-2854400	Cluster_857	Pocillopora_meandrina_HIv1___Sc0000002	2853977	2854400	424	115	47	0.008695652173913044	-	ACUGGUACAAACAAAGGUCGAGUGGCCAUU	12	4	81	2	0	2	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2872429-2872858	Cluster_858	Pocillopora_meandrina_HIv1___Sc0000002	2872429	2872858	430	132	60	0.946969696969697	+	UGUUUACUUUCUUUACAACUUCGGAUACGUG	31	0	128	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3173969-3174386	Cluster_859	Pocillopora_meandrina_HIv1___Sc0000002	3173969	3174386	418	297	202	1.0	+	GACGGAAAGGGAUUCUUGAUCA	7	79	125	24	26	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3174981-3175406	Cluster_860	Pocillopora_meandrina_HIv1___Sc0000002	3174981	3175406	426	218	158	1.0	+	GACCGUGCACUUCUAGAACUGCAGCU	7	44	105	12	23	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3175713-3176133	Cluster_861	Pocillopora_meandrina_HIv1___Sc0000002	3175713	3176133	421	189	130	1.0	+	AAAGAUAAAAAGUGGAACAAGACU	10	36	87	9	19	10	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3179266-3179683	Cluster_862	Pocillopora_meandrina_HIv1___Sc0000002	3179266	3179683	418	211	162	0.995260663507109	+	UUUGGAAAUCUGUUUGAA	5	48	85	20	15	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3313496-3314695	Cluster_863	Pocillopora_meandrina_HIv1___Sc0000002	3313496	3314695	1200	1308	519	0.04969418960244648	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	105	18	1222	10	6	17	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3314782-3315633	Cluster_864	Pocillopora_meandrina_HIv1___Sc0000002	3314782	3315633	852	1659	505	0.06148282097649186	-	UGUGUGUAUUAAUCGUAAGGAGUUCCUU	89	7	1596	3	4	9	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3315686-3317190	Cluster_865	Pocillopora_meandrina_HIv1___Sc0000002	3315686	3317190	1505	2216	622	0.04512635379061372	-	UGAAGAAGUUGACUUGACUGGAACCACU	136	6	2124	6	10	20	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3354796-3355223	Cluster_866	Pocillopora_meandrina_HIv1___Sc0000002	3354796	3355223	428	227	151	0.24669603524229075	.	UUUGUCUGAUGUUCGUCCUCCCCAAGCU	7	6	195	3	2	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3374185-3374726	Cluster_867	Pocillopora_meandrina_HIv1___Sc0000002	3374185	3374726	542	989	305	1.0	+	AGUGGAAGAGAACUUUGCAACAUUU	208	159	559	42	133	29	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3394607-3395035	Cluster_868	Pocillopora_meandrina_HIv1___Sc0000002	3394607	3395035	429	163	44	0.9141104294478528	+	AAUGGGAAAACGAGAACAGCGUGAGUGUU	62	1	133	1	1	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3452992-3453421	Cluster_869	Pocillopora_meandrina_HIv1___Sc0000002	3452992	3453421	430	90	24	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	0	89	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3594324-3594932	Cluster_870	Pocillopora_meandrina_HIv1___Sc0000002	3594324	3594932	609	1368	237	0.9144736842105263	+	UACUGUCUAUCCUAACUGCGCUUCGC	186	7	1306	8	11	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3595018-3595453	Cluster_871	Pocillopora_meandrina_HIv1___Sc0000002	3595018	3595453	436	269	52	0.7100371747211895	.	UUACAGAAAUUAAUGCGGGAAACAGUACU	144	9	250	0	2	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3633498-3633928	Cluster_872	Pocillopora_meandrina_HIv1___Sc0000002	3633498	3633928	431	149	40	1.0	+	UUCUGGCUAGCAAUUACUUCUGAAGAAGGUU	55	2	146	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3634440-3635614	Cluster_873	Pocillopora_meandrina_HIv1___Sc0000002	3634440	3635614	1175	1474	413	0.9877883310719131	+	UAUUCUAAUUCGGUGGUUUGACAUUCCAUU	114	8	1418	8	8	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3645599-3646028	Cluster_874	Pocillopora_meandrina_HIv1___Sc0000002	3645599	3646028	430	294	86	1.0	+	AUCAGUCUGAAUGAUCGUGAAAGGGGUUGG	78	3	278	1	0	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3650871-3651300	Cluster_875	Pocillopora_meandrina_HIv1___Sc0000002	3650871	3651300	430	4463	219	0.9997759354694152	+	AACCACUGUAGUAAUUGACUGUUACCU	1522	39	4416	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3651393-3652409	Cluster_876	Pocillopora_meandrina_HIv1___Sc0000002	3651393	3652409	1017	814	277	0.9975429975429976	+	UCUAUUCUGGAUAGCUUGCGAUUACUGUU	70	3	799	0	4	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3653308-3653801	Cluster_877	Pocillopora_meandrina_HIv1___Sc0000002	3653308	3653801	494	943	197	0.9968186638388123	+	UACAAAACCAGUAGAAAUGCAGAAAAAACAG	149	45	851	13	5	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3653807-3656139	Cluster_878	Pocillopora_meandrina_HIv1___Sc0000002	3653807	3656139	2333	14026	2533	0.9794667046912876	+	UCUUCCUUUUAUCUCCUGUCCUUUUUAGA	584	723	12629	78	164	209	223	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3656956-3657999	Cluster_879	Pocillopora_meandrina_HIv1___Sc0000002	3656956	3657999	1044	30951	1775	0.9974152692966302	+	UUGUCUGGAUUGUACACUUUGAAGUGCA	2234	65	30546	60	76	76	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3658170-3658570	Cluster_880	Pocillopora_meandrina_HIv1___Sc0000002	3658170	3658570	401	169	94	1.0	+	UGAAAUAGACUCACAUUCAUCAAGAUGACU	18	3	161	3	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3659265-3659693	Cluster_881	Pocillopora_meandrina_HIv1___Sc0000002	3659265	3659693	429	299	115	1.0	+	UCUUCCCAUCGUCUUCCAAAAUUUGAGGA	28	2	290	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3660444-3660896	Cluster_882	Pocillopora_meandrina_HIv1___Sc0000002	3660444	3660896	453	1495	209	1.0	+	UACUUCUUGACUGCCUUCAUACUUGUGGC	437	10	1470	2	4	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3666073-3667754	Cluster_883	Pocillopora_meandrina_HIv1___Sc0000002	3666073	3667754	1682	2003	823	0.19121318022965553	-	UCUAACGCGUUUGUCUGACAUCCCUUU	138	40	1779	21	37	31	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3668740-3670593	Cluster_884	Pocillopora_meandrina_HIv1___Sc0000002	3668740	3670593	1854	18431	2703	0.8978894254245564	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3126	311	16247	205	100	229	1339	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3674659-3675089	Cluster_885	Pocillopora_meandrina_HIv1___Sc0000002	3674659	3675089	431	184	68	1.0	+	UGUUUUACUCCUGAAGAGCCAACUGGACGGG	27	2	177	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3675642-3676070	Cluster_886	Pocillopora_meandrina_HIv1___Sc0000002	3675642	3676070	429	195	42	1.0	+	UAAAGAAGAGAAAUGCUAAAGGAUUCAGC	78	0	195	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3676129-3676585	Cluster_887	Pocillopora_meandrina_HIv1___Sc0000002	3676129	3676585	457	11884	97	0.9999158532480646	+	UGAUCUUCUUGAAUUUGUCAUUUACAAUA	4993	1	11853	0	7	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3676790-3677257	Cluster_888	Pocillopora_meandrina_HIv1___Sc0000002	3676790	3677257	468	2198	181	1.0	+	UUCCAUUUCACCAAAUAUUGAACCUGAAGG	493	2	2194	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3678079-3678480	Cluster_889	Pocillopora_meandrina_HIv1___Sc0000002	3678079	3678480	402	159	75	1.0	+	UGAAGUCAUCUGUUUCCAGGGAGCUGGC	36	2	156	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3678825-3679253	Cluster_890	Pocillopora_meandrina_HIv1___Sc0000002	3678825	3679253	429	257	157	1.0	+	UGUUUGUAUCUUCUUUCUUCUUUCUUGA	9	0	250	3	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3679595-3680568	Cluster_891	Pocillopora_meandrina_HIv1___Sc0000002	3679595	3680568	974	855	337	1.0	+	UAAUACCAAACAUGUCUGACUCUAUGCGUC	98	8	820	3	3	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3680865-3682503	Cluster_892	Pocillopora_meandrina_HIv1___Sc0000002	3680865	3682503	1639	3191	843	0.9934189909119399	+	UAUCACUUCUACAUGGACAGAACUUUUGGGA	260	15	3097	11	17	21	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3682594-3683420	Cluster_893	Pocillopora_meandrina_HIv1___Sc0000002	3682594	3683420	827	346	162	1.0	+	UGAUCUGUCUUACUUCUAUCAACGUUGAUA	24	1	334	1	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3684709-3685123	Cluster_894	Pocillopora_meandrina_HIv1___Sc0000002	3684709	3685123	415	237	126	0.9957805907172996	+	UUGGUCACUGUCUUUGCGCUAAGUUCACAUU	11	3	222	1	4	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3688785-3689584	Cluster_895	Pocillopora_meandrina_HIv1___Sc0000002	3688785	3689584	800	746	306	0.9865951742627346	+	UAAGUGCCAAAGACUGUUUCAGAACUUC	33	15	699	5	8	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3690290-3691344	Cluster_896	Pocillopora_meandrina_HIv1___Sc0000002	3690290	3691344	1055	515	179	0.9980582524271845	+	UUGGAUGUACCAAAUUUCUUGAGACUGGCA	66	5	501	0	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3694540-3695954	Cluster_897	Pocillopora_meandrina_HIv1___Sc0000002	3694540	3695954	1415	7520	1154	0.999468085106383	+	UGAUCCUUUUCAUCUGGCAUGUGGACGUG	539	49	7275	16	42	86	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3700620-3701260	Cluster_898	Pocillopora_meandrina_HIv1___Sc0000002	3700620	3701260	641	462	169	1.0	+	UGGGAUCAAAGUACUUUAAUACAGGAGAUU	41	3	451	2	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3701325-3701742	Cluster_899	Pocillopora_meandrina_HIv1___Sc0000002	3701325	3701742	418	123	57	1.0	+	UGAAACUCUUCUGGCGCAGGUGAAAUACC	21	4	109	5	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3703878-3704313	Cluster_900	Pocillopora_meandrina_HIv1___Sc0000002	3703878	3704313	436	359	93	1.0	+	UUGACUGCCUCUGUACCUGUGAGAAAUAAC	119	1	349	7	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3705341-3706092	Cluster_901	Pocillopora_meandrina_HIv1___Sc0000002	3705341	3706092	752	840	248	0.9761904761904762	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	77	0	817	3	2	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3706375-3707908	Cluster_902	Pocillopora_meandrina_HIv1___Sc0000002	3706375	3707908	1534	5349	1086	0.9605533744625163	+	UGUUACUUUCAGUGGCUGUUCGAGGGGC	1181	30	5023	21	70	66	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3707943-3710875	Cluster_903	Pocillopora_meandrina_HIv1___Sc0000002	3707943	3710875	2933	11183	2254	0.9798801752660288	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1214	53	10842	25	36	67	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3712605-3713228	Cluster_904	Pocillopora_meandrina_HIv1___Sc0000002	3712605	3713228	624	386	117	0.9870466321243523	+	UUCUAUGGUAUGCAUGUCAGCAUGACUGU	45	5	367	4	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3715928-3716824	Cluster_905	Pocillopora_meandrina_HIv1___Sc0000002	3715928	3716824	897	9779	913	0.9588915021985888	+	UAUUGAACUUGGAGCAAACCUUGCCUAAA	1266	67	9268	47	115	108	174	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3718063-3719284	Cluster_906	Pocillopora_meandrina_HIv1___Sc0000002	3718063	3719284	1222	2024	498	0.8038537549407114	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	479	7	1915	5	14	32	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3719621-3720050	Cluster_907	Pocillopora_meandrina_HIv1___Sc0000002	3719621	3720050	430	106	26	1.0	+	UGUGAGGAUAGCAGCUUUUGAAAAAACAUU	67	0	103	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3725150-3726723	Cluster_908	Pocillopora_meandrina_HIv1___Sc0000002	3725150	3726723	1574	10795	1284	0.027883279295970356	-	UGUGCUUAAAAAUCUCUGGCCCAAAUACCUU	1596	46	10357	24	57	90	221	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3730451-3730897	Cluster_909	Pocillopora_meandrina_HIv1___Sc0000002	3730451	3730897	447	533	159	0.5666041275797373	.	UGUGAACACGAUGAAACACCUUGCCAAA	51	5	417	2	9	62	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3730961-3731833	Cluster_910	Pocillopora_meandrina_HIv1___Sc0000002	3730961	3731833	873	8487	980	0.8038176033934252	+	UACUUGUCGAAGUCCUGGCCCUCUAGCC	2087	75	7546	26	140	331	369	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3742641-3743070	Cluster_911	Pocillopora_meandrina_HIv1___Sc0000002	3742641	3743070	430	140	46	1.0	+	UGCGAUCGCCGCAAAGAACUUCCUUUACGA	60	0	136	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3745169-3745980	Cluster_912	Pocillopora_meandrina_HIv1___Sc0000002	3745169	3745980	812	5866	460	0.9923286737129219	+	UGGGUUCUCGAUCACGUCUAAAUACACG	1201	21	5707	11	17	74	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3750061-3750938	Cluster_913	Pocillopora_meandrina_HIv1___Sc0000002	3750061	3750938	878	1256	279	0.9864649681528662	+	UUAUUUGCACUAUUGUGGAAAAUUCCUGC	237	19	1224	5	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3751156-3751595	Cluster_914	Pocillopora_meandrina_HIv1___Sc0000002	3751156	3751595	440	350	136	0.7371428571428571	.	UCACGGUAGUAGUGUUGUUCAAU	26	4	293	2	2	29	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3765212-3765635	Cluster_915	Pocillopora_meandrina_HIv1___Sc0000002	3765212	3765635	424	136	67	0.9117647058823529	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	19	1	129	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3766728-3767132	Cluster_916	Pocillopora_meandrina_HIv1___Sc0000002	3766728	3767132	405	109	64	0.8348623853211009	+	UGUAUUGAUUGAACUUGUCGGUUGACC	8	0	94	2	0	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3777071-3777480	Cluster_917	Pocillopora_meandrina_HIv1___Sc0000002	3777071	3777480	410	148	72	0.25	.	AAGAAGCGCAGCUCUGAAGUCUUUGCCUG	17	2	138	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3841944-3842042	Cluster_918	Pocillopora_meandrina_HIv1___Sc0000002	3841944	3842042	99	106357	264	0.0	-	UUGUGUAACUCCCUAAGGAAGG	66971	4182	3	2786	98832	535	19	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:3888853-3889274	Cluster_919	Pocillopora_meandrina_HIv1___Sc0000002	3888853	3889274	422	80	29	0.9875	+	CAGUGGGCUGUAGACUCAAACUUGGGG	16	8	60	3	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3903134-3903760	Cluster_920	Pocillopora_meandrina_HIv1___Sc0000002	3903134	3903760	627	328	107	0.039634146341463415	-	AAGUUUGAAAGGGUUAAGGAACAAGAGC	41	11	270	17	3	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3941035-3941465	Cluster_921	Pocillopora_meandrina_HIv1___Sc0000002	3941035	3941465	431	668	116	0.05688622754491018	-	UUAACCGUUAUAGUUUUGACUUGAAUAU	123	2	595	2	32	2	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3941650-3942338	Cluster_922	Pocillopora_meandrina_HIv1___Sc0000002	3941650	3942338	689	1498	181	0.020026702269692925	-	GAUUGGAACAGUCAUCAGACGGGUGGACA	433	56	1325	6	23	64	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4018836-4019275	Cluster_923	Pocillopora_meandrina_HIv1___Sc0000002	4018836	4019275	440	7294	812	0.9942418426103646	+	GCACAUAUACUAAAAUUGGAACGAUA	395	1048	3368	651	576	1032	619	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4047421-4047931	Cluster_924	Pocillopora_meandrina_HIv1___Sc0000002	4047421	4047931	511	2287	316	0.7944905990380411	.	AGAGAUCUUAGAAAACGAUCGUGUGUGCG	426	30	2200	2	6	30	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4048071-4048664	Cluster_925	Pocillopora_meandrina_HIv1___Sc0000002	4048071	4048664	594	1108	275	0.05144404332129964	-	UAUGAAAGAUCUUGAUGUGGUGCGUCA	83	3	1068	1	15	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4048723-4049272	Cluster_926	Pocillopora_meandrina_HIv1___Sc0000002	4048723	4049272	550	681	219	0.3142437591776799	.	ACGAUUUAGAUGCCAAGAUUGAGAACCUCU	66	5	626	2	9	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4049287-4049710	Cluster_927	Pocillopora_meandrina_HIv1___Sc0000002	4049287	4049710	424	148	69	0.1891891891891892	-	UUUUGUGUUAUCUUGUCUUGGAGA	22	2	105	1	1	15	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4540570-4540975	Cluster_928	Pocillopora_meandrina_HIv1___Sc0000002	4540570	4540975	406	132	92	0.6439393939393939	.	AGCUUCGUUAUGAGAUGAGAAUGA	12	13	77	9	7	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4567952-4568379	Cluster_929	Pocillopora_meandrina_HIv1___Sc0000002	4567952	4568379	428	159	64	0.031446540880503145	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	39	2	144	2	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4727879-4728317	Cluster_930	Pocillopora_meandrina_HIv1___Sc0000002	4727879	4728317	439	215	89	0.2744186046511628	.	UGUGAUUUCAACUGUGAGUGCCAGAA	20	4	173	1	5	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4728528-4728984	Cluster_931	Pocillopora_meandrina_HIv1___Sc0000002	4728528	4728984	457	308	112	0.048701298701298704	-	UGUUCUGUUAAUUGUUUGUCUGAGAUGC	44	4	279	1	4	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4807584-4808012	Cluster_932	Pocillopora_meandrina_HIv1___Sc0000002	4807584	4808012	429	143	48	0.013986013986013986	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	19	0	141	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4856630-4857723	Cluster_933	Pocillopora_meandrina_HIv1___Sc0000002	4856630	4857723	1094	1130	456	0.9796460176991151	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	105	7	1086	5	5	15	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4857757-4858178	Cluster_934	Pocillopora_meandrina_HIv1___Sc0000002	4857757	4858178	422	166	93	0.9457831325301205	+	UGGGAAUCCGAAUCGUGGUACAAAGUCA	22	1	154	2	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4858382-4858809	Cluster_935	Pocillopora_meandrina_HIv1___Sc0000002	4858382	4858809	428	262	134	0.9809160305343512	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	30	3	246	2	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4859812-4860852	Cluster_936	Pocillopora_meandrina_HIv1___Sc0000002	4859812	4860852	1041	936	390	0.9636752136752137	+	UAUAGUUCUUCUGUACUGGCUCAUUGUC	46	6	890	3	5	15	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4860993-4862599	Cluster_937	Pocillopora_meandrina_HIv1___Sc0000002	4860993	4862599	1607	3177	1179	0.9005350960025181	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	100	39	2919	24	29	53	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4992098-4992528	Cluster_938	Pocillopora_meandrina_HIv1___Sc0000002	4992098	4992528	431	1926	130	0.003115264797507788	-	UUGGAAUUCGAAGCAAGUAACAAUUGACAGG	533	5	1908	6	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5433888-5434317	Cluster_939	Pocillopora_meandrina_HIv1___Sc0000002	5433888	5434317	430	368	48	0.002717391304347826	-	UUCCAUGACUCUGUUUAAACGAAAACGAAC	225	1	363	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5496902-5497540	Cluster_940	Pocillopora_meandrina_HIv1___Sc0000002	5496902	5497540	639	297	134	0.6599326599326599	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	51	1	251	4	5	12	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5604506-5604918	Cluster_941	Pocillopora_meandrina_HIv1___Sc0000002	5604506	5604918	413	230	173	0.0	-	CUUGUAACAAAGAUCGUGGGCA	8	60	87	18	27	23	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5605961-5606377	Cluster_942	Pocillopora_meandrina_HIv1___Sc0000002	5605961	5606377	417	169	125	0.005917159763313609	-	AGAAAUUGUGUGCUUCGACA	5	48	59	19	17	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5647892-5648347	Cluster_943	Pocillopora_meandrina_HIv1___Sc0000002	5647892	5648347	456	357	69	0.9831932773109243	+	UUCUGUUGUUUUUGUUCCCU	37	170	4	44	89	47	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5730754-5731313	Cluster_944	Pocillopora_meandrina_HIv1___Sc0000002	5730754	5731313	560	225	108	0.9777777777777777	+	UGAUCCGGAGCGCUCCCGAACGCCUC	27	4	214	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5864725-5865274	Cluster_945	Pocillopora_meandrina_HIv1___Sc0000002	5864725	5865274	550	731	233	0.5718194254445964	.	GGGAAUUAGAGCCUGUGGAACAGU	108	11	435	23	8	82	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5865631-5866439	Cluster_946	Pocillopora_meandrina_HIv1___Sc0000002	5865631	5866439	809	1655	480	0.0030211480362537764	-	UCGGCUAUUCACUCUAUGAGCGAUAUCAAU	175	3	1598	10	6	5	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5883572-5884385	Cluster_947	Pocillopora_meandrina_HIv1___Sc0000002	5883572	5884385	814	405	227	0.9012345679012346	+	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	17	8	373	1	1	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6062167-6062572	Cluster_948	Pocillopora_meandrina_HIv1___Sc0000002	6062167	6062572	406	98	57	1.0	+	UGAGCUACUGUGUGACGCCGGUCUUACUUU	16	0	95	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6062911-6063344	Cluster_949	Pocillopora_meandrina_HIv1___Sc0000002	6062911	6063344	434	493	239	0.9898580121703854	+	UAUUCUUUAGAAAUCGACUUGCUUGAUGCA	23	4	481	2	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6066733-6067141	Cluster_950	Pocillopora_meandrina_HIv1___Sc0000002	6066733	6067141	409	123	49	0.3821138211382114	.	UGAUCUUAUUUCAAAUAAUUCUUCUUGACUG	22	1	78	2	2	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6068774-6069194	Cluster_951	Pocillopora_meandrina_HIv1___Sc0000002	6068774	6069194	421	205	142	0.5804878048780487	.	AAAGUCUUCAAAGAAAUCUGUCCUGACAC	7	9	171	3	1	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6069257-6069690	Cluster_952	Pocillopora_meandrina_HIv1___Sc0000002	6069257	6069690	434	319	105	0.9843260188087775	+	UGAUGAGAGGUAAUCUGGAGCCUGACC	62	1	314	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6070150-6070561	Cluster_953	Pocillopora_meandrina_HIv1___Sc0000002	6070150	6070561	412	132	82	0.9848484848484849	+	UUUGCUCAUAUCUAAUAGAACUACUGCCGUU	10	0	128	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6072481-6073528	Cluster_954	Pocillopora_meandrina_HIv1___Sc0000002	6072481	6073528	1048	635	280	0.5433070866141733	.	UGUAGUAUUUCCGAGCCUUUUCGCACUU	26	6	542	6	6	41	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6079695-6081472	Cluster_955	Pocillopora_meandrina_HIv1___Sc0000002	6079695	6081472	1778	6043	1624	0.8924375310276352	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	343	41	5657	54	44	62	185	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6081794-6084218	Cluster_956	Pocillopora_meandrina_HIv1___Sc0000002	6081794	6084218	2425	3578	1283	0.8717160424818334	+	UACUCGAAAUCUCCAAUGACUGCAUUUGA	257	37	3326	28	30	49	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6090515-6090946	Cluster_957	Pocillopora_meandrina_HIv1___Sc0000002	6090515	6090946	432	602	89	1.0	+	UAAGACAAUAAUUGGUACUGCAACGAGUGU	76	0	601	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6094144-6095261	Cluster_958	Pocillopora_meandrina_HIv1___Sc0000002	6094144	6095261	1118	5223	926	0.858701895462378	+	UGAGAUUGUUAUUCCAUCCUCCUGGA	542	26	4658	16	19	381	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6099990-6101266	Cluster_959	Pocillopora_meandrina_HIv1___Sc0000002	6099990	6101266	1277	1777	581	0.9324704558244232	+	UGACAUUACUCGUGGGUACCAAAACUGUGU	66	15	1657	6	12	41	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6102732-6103990	Cluster_960	Pocillopora_meandrina_HIv1___Sc0000002	6102732	6103990	1259	5248	1127	0.7764862804878049	.	UUUCAAAUGCUUUUGUAGAUCAUCUCCAAA	450	44	4755	33	67	150	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6511195-6511674	Cluster_961	Pocillopora_meandrina_HIv1___Sc0000002	6511195	6511674	480	781	240	0.02176696542893726	-	GCGCGGAUGAGCCUCACUGGUGUGGGGU	85	232	461	42	26	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6783071-6783501	Cluster_962	Pocillopora_meandrina_HIv1___Sc0000002	6783071	6783501	431	446	50	0.9887892376681614	+	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	154	2	439	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6892663-6894009	Cluster_963	Pocillopora_meandrina_HIv1___Sc0000002	6892663	6894009	1347	11228	1322	0.8798539365871036	+	UACUUUCUGAUUGACUUGGAGUGUGGGG	1909	95	10223	40	49	218	603	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6894228-6894656	Cluster_964	Pocillopora_meandrina_HIv1___Sc0000002	6894228	6894656	429	173	27	0.9653179190751445	+	UUGACUGACAGAAGAUCUGGAAACUGAAG	51	4	160	1	7	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7339211-7339640	Cluster_965	Pocillopora_meandrina_HIv1___Sc0000002	7339211	7339640	430	96	22	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	0	95	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7342295-7343168	Cluster_966	Pocillopora_meandrina_HIv1___Sc0000002	7342295	7343168	874	534	278	0.9026217228464419	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	19	4	511	1	2	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7372934-7373361	Cluster_967	Pocillopora_meandrina_HIv1___Sc0000002	7372934	7373361	428	167	44	0.9580838323353293	+	UAAGUUGAUCUCCUACAGUUUGACAUGU	40	3	163	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7745977-7746399	Cluster_968	Pocillopora_meandrina_HIv1___Sc0000002	7745977	7746399	423	182	112	0.005494505494505495	-	CAUUGCUCGAGUUUUGACUGUUAUCA	21	37	100	10	17	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7970885-7971312	Cluster_969	Pocillopora_meandrina_HIv1___Sc0000002	7970885	7971312	428	196	81	1.0	+	UAUUUUUAAUCUCUUCUAUACCCUCUUGGA	19	0	195	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8140569-8140992	Cluster_970	Pocillopora_meandrina_HIv1___Sc0000002	8140569	8140992	424	78	30	1.0	+	AUGAUGUCGAGCGUUUUCGGAAUGGGCA	18	1	62	4	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8468347-8468765	Cluster_971	Pocillopora_meandrina_HIv1___Sc0000002	8468347	8468765	419	139	6	0.0	-	AUGUAAGGAGAAGAUUUUU	125	138	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8530203-8530636	Cluster_972	Pocillopora_meandrina_HIv1___Sc0000002	8530203	8530636	434	823	79	0.9842041312272175	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	300	0	814	0	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8530938-8531364	Cluster_973	Pocillopora_meandrina_HIv1___Sc0000002	8530938	8531364	427	352	99	0.002840909090909091	-	AAUGGGAAAACGAGAACAGCGUG	39	3	180	5	3	76	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8797244-8797663	Cluster_974	Pocillopora_meandrina_HIv1___Sc0000002	8797244	8797663	420	625	41	1.0	+	GUCACGUCGGGGUCACCA	223	624	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8842763-8843457	Cluster_975	Pocillopora_meandrina_HIv1___Sc0000002	8842763	8843457	695	430	173	0.2837209302325581	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	62	4	362	2	1	14	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8843642-8844337	Cluster_976	Pocillopora_meandrina_HIv1___Sc0000002	8843642	8844337	696	869	89	0.019562715765247412	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGU	261	2	852	1	2	11	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9033889-9034316	Cluster_977	Pocillopora_meandrina_HIv1___Sc0000002	9033889	9034316	428	241	150	0.991701244813278	+	UGAAAUGCGAGAUGUAGUUGAUGAAGUCAAG	11	31	190	5	8	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9043627-9044105	Cluster_978	Pocillopora_meandrina_HIv1___Sc0000002	9043627	9044105	479	9674	376	0.01447178002894356	-	GGAAAAUCCAGGACCUACAAUAUUUGAUGU	3031	13	9345	23	9	61	223	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9051075-9051502	Cluster_979	Pocillopora_meandrina_HIv1___Sc0000002	9051075	9051502	428	189	76	0.005291005291005291	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	3	175	0	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9080238-9080665	Cluster_980	Pocillopora_meandrina_HIv1___Sc0000002	9080238	9080665	428	548	56	0.005474452554744526	-	UGAAACUCUGAUCUGAAAAUAUUUGUC	215	0	545	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9166314-9166740	Cluster_981	Pocillopora_meandrina_HIv1___Sc0000002	9166314	9166740	427	119	49	0.7226890756302521	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	36	0	115	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9166794-9167212	Cluster_982	Pocillopora_meandrina_HIv1___Sc0000002	9166794	9167212	419	80	48	0.0375	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	8	0	60	2	1	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9556404-9556827	Cluster_983	Pocillopora_meandrina_HIv1___Sc0000002	9556404	9556827	424	75	11	0.9066666666666666	+	UGGAUUAUCAUUUUUUGUUAGUGUUGGUA	36	0	72	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9690185-9690613	Cluster_984	Pocillopora_meandrina_HIv1___Sc0000002	9690185	9690613	429	221	115	0.6742081447963801	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	32	105	57	36	13	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9784858-9785294	Cluster_985	Pocillopora_meandrina_HIv1___Sc0000002	9784858	9785294	437	1315	153	0.9619771863117871	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	521	25	1269	7	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9791938-9792368	Cluster_986	Pocillopora_meandrina_HIv1___Sc0000002	9791938	9792368	431	1356	101	0.0	-	CGAUCUAACAAGAACAAUAUGUGCUGACU	517	1	1347	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9806413-9806891	Cluster_987	Pocillopora_meandrina_HIv1___Sc0000002	9806413	9806891	479	1045	156	0.09186602870813397	-	UCAGGAUGCUUAAGGAAAACAGGUGGA	264	36	964	12	3	7	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9890408-9890827	Cluster_988	Pocillopora_meandrina_HIv1___Sc0000002	9890408	9890827	420	210	95	0.9285714285714286	+	UACGUUUUAGUUCGAAUUGUUGGGACCU	16	3	200	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10079214-10079641	Cluster_989	Pocillopora_meandrina_HIv1___Sc0000002	10079214	10079641	428	356	44	0.019662921348314606	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	214	1	351	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10097278-10097880	Cluster_990	Pocillopora_meandrina_HIv1___Sc0000002	10097278	10097880	603	656	226	0.5960365853658537	.	UGCGAUUACAGAGGUGCGUUGGAACUCA	133	32	577	15	5	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10098007-10098488	Cluster_991	Pocillopora_meandrina_HIv1___Sc0000002	10098007	10098488	482	584	164	0.9554794520547946	+	AAUGGGAAAACGAGAACAGCGUG	62	10	340	11	7	102	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10237076-10237574	Cluster_992	Pocillopora_meandrina_HIv1___Sc0000002	10237076	10237574	499	522	67	0.01532567049808429	-	UUAUGAGUGAACCUUUCAUCGAGAAACAUG	154	4	508	4	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10291453-10292280	Cluster_993	Pocillopora_meandrina_HIv1___Sc0000002	10291453	10292280	828	381	105	0.963254593175853	+	UAGGACAACUGAGAAUCCACGUAGACUC	104	1	371	2	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10423172-10423595	Cluster_994	Pocillopora_meandrina_HIv1___Sc0000002	10423172	10423595	424	143	29	0.0	-	GUGUGUGUGUGUCUCUCUGUCU	40	30	17	8	63	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10556606-10557024	Cluster_995	Pocillopora_meandrina_HIv1___Sc0000002	10556606	10557024	419	125	6	0.0	-	GUGAGGGAACUGGCUCUUG	103	124	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10652369-10652797	Cluster_996	Pocillopora_meandrina_HIv1___Sc0000002	10652369	10652797	429	95	23	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	38	1	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10654660-10655068	Cluster_997	Pocillopora_meandrina_HIv1___Sc0000002	10654660	10655068	409	75	37	0.28	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	13	0	73	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10656468-10656897	Cluster_998	Pocillopora_meandrina_HIv1___Sc0000002	10656468	10656897	430	328	40	0.9969512195121951	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	138	0	328	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10657860-10658289	Cluster_999	Pocillopora_meandrina_HIv1___Sc0000002	10657860	10658289	430	1772	166	0.9937923250564334	+	AUGGGUCUUAUUGAGCAUUACAAAACAGCA	769	20	1682	11	8	9	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10689132-10689551	Cluster_1000	Pocillopora_meandrina_HIv1___Sc0000002	10689132	10689551	420	116	84	1.0	+	CAAACGUGAUUUGAGCAGAUUU	5	38	33	10	16	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10689730-10690137	Cluster_1001	Pocillopora_meandrina_HIv1___Sc0000002	10689730	10690137	408	166	111	1.0	+	CAUGUGACCAGUCUUGUAGAGAACA	5	48	62	11	13	21	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10725804-10726233	Cluster_1002	Pocillopora_meandrina_HIv1___Sc0000002	10725804	10726233	430	142	45	0.9929577464788732	+	UGAAUAGCAUAACUGAUGAACUACGUG	25	2	137	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10726293-10726713	Cluster_1003	Pocillopora_meandrina_HIv1___Sc0000002	10726293	10726713	421	198	107	0.8383838383838383	+	UGAUAUAAAUGACAAAAAGUAAAGGGC	9	21	155	5	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10791059-10791611	Cluster_1004	Pocillopora_meandrina_HIv1___Sc0000002	10791059	10791611	553	235	93	0.9106382978723404	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	36	3	211	1	2	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10792850-10794072	Cluster_1005	Pocillopora_meandrina_HIv1___Sc0000002	10792850	10794072	1223	1998	463	0.7922922922922923	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	513	13	1872	5	5	28	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10810071-10810499	Cluster_1006	Pocillopora_meandrina_HIv1___Sc0000002	10810071	10810499	429	439	57	0.025056947608200455	-	UAAUCGACGAAUACAAUCCAGGUAUAACU	323	1	427	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10810861-10811263	Cluster_1007	Pocillopora_meandrina_HIv1___Sc0000002	10810861	10811263	403	134	51	0.0	-	UGGUUUUUCCGUAUCGUUGCGCAAGUAA	23	0	134	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10811366-10811817	Cluster_1008	Pocillopora_meandrina_HIv1___Sc0000002	10811366	10811817	452	2029	209	0.0	-	UGUGCAGUUGAAACAUAGACGCUUCUCGAGA	1146	3	1997	5	0	3	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10812246-10812676	Cluster_1009	Pocillopora_meandrina_HIv1___Sc0000002	10812246	10812676	431	184	58	0.005434782608695652	-	UCCGUACAAGAGUGUUUAAUCUGCGCAAACU	82	1	182	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10824578-10825173	Cluster_1010	Pocillopora_meandrina_HIv1___Sc0000002	10824578	10825173	596	3896	510	0.9740759753593429	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	680	49	3663	36	29	50	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10845722-10845816	Cluster_1011	Pocillopora_meandrina_HIv1___Sc0000002	10845722	10845816	95	12003	340	0.00899775056235941	-	UUGCCGUUAACCCAAAACCUUCA	4844	286	129	442	5105	5860	181	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:10993606-10994752	Cluster_1012	Pocillopora_meandrina_HIv1___Sc0000002	10993606	10994752	1147	643	307	0.9020217729393468	+	UCAGAGAGGACGAUGCUAUUAACCCAGU	30	3	601	3	4	8	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10995536-10995965	Cluster_1013	Pocillopora_meandrina_HIv1___Sc0000002	10995536	10995965	430	278	148	0.8633093525179856	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	22	6	257	0	1	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11007210-11008706	Cluster_1014	Pocillopora_meandrina_HIv1___Sc0000002	11007210	11008706	1497	1917	747	0.874282733437663	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	64	23	1778	2	20	43	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11009550-11010451	Cluster_1015	Pocillopora_meandrina_HIv1___Sc0000002	11009550	11010451	902	967	330	0.9069286452947259	+	UGAGACUUGUUGUUGGGUAACUGACGUG	105	9	908	5	3	21	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11010488-11012492	Cluster_1016	Pocillopora_meandrina_HIv1___Sc0000002	11010488	11012492	2005	6391	1688	0.7814113597246127	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	480	176	5714	24	52	193	232	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11350672-11351104	Cluster_1017	Pocillopora_meandrina_HIv1___Sc0000002	11350672	11351104	433	425	168	0.9976470588235294	+	GAAGAUUGUGGGUUCGACUCC	37	206	99	76	23	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11590390-11590812	Cluster_1018	Pocillopora_meandrina_HIv1___Sc0000002	11590390	11590812	423	209	122	0.45454545454545453	.	UCCGACUGUGAGUCCAAUGC	11	114	21	51	9	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11685056-11685474	Cluster_1019	Pocillopora_meandrina_HIv1___Sc0000002	11685056	11685474	419	338	18	0.9615384615384616	+	CGGCCUGAAAAAAAAAAA	230	332	5	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11846947-11847603	Cluster_1020	Pocillopora_meandrina_HIv1___Sc0000002	11846947	11847603	657	770	289	0.13636363636363635	-	UGUAGAAUCAAUCUGUUACUAAGACACC	105	8	714	9	8	7	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11943384-11943811	Cluster_1021	Pocillopora_meandrina_HIv1___Sc0000002	11943384	11943811	428	140	42	0.12857142857142856	-	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	23	1	137	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12343138-12343591	Cluster_1022	Pocillopora_meandrina_HIv1___Sc0000002	12343138	12343591	454	560	78	0.0	-	UACGAUGUUGUCUUGUCUGCAAGC	108	20	9	106	119	119	187	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12358290-12358718	Cluster_1023	Pocillopora_meandrina_HIv1___Sc0000002	12358290	12358718	429	352	82	0.14488636363636365	-	UAGUGUUUGAAUUUUUGAAAGAAAUGGUC	219	30	296	15	2	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12381688-12382117	Cluster_1024	Pocillopora_meandrina_HIv1___Sc0000002	12381688	12382117	430	158	38	0.0	-	GUAAGAAACCACUUAGAACCAUGGAUGACA	73	2	146	0	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12537655-12538076	Cluster_1025	Pocillopora_meandrina_HIv1___Sc0000002	12537655	12538076	422	79	27	0.012658227848101266	-	ACUGUCAGGAAUAAUAACUCCAGUAGAUU	18	1	61	2	3	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12847776-12848204	Cluster_1026	Pocillopora_meandrina_HIv1___Sc0000002	12847776	12848204	429	221	72	0.9728506787330317	+	UGCGAUACCGGUGCAGUGCUCUACCAAUU	55	16	184	9	6	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12849337-12849760	Cluster_1027	Pocillopora_meandrina_HIv1___Sc0000002	12849337	12849760	424	444	48	0.0045045045045045045	-	UUUGAGGCCUUGAACUUGCAGACA	59	42	1	22	81	156	142	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12946840-12947268	Cluster_1028	Pocillopora_meandrina_HIv1___Sc0000002	12946840	12947268	429	469	138	0.9658848614072495	+	UGUAGAAUCAAUCUGUUACUAAGACACC	99	4	440	10	3	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12947409-12947849	Cluster_1029	Pocillopora_meandrina_HIv1___Sc0000002	12947409	12947849	441	363	181	0.6528925619834711	.	UAAGCAAGGAUAUAGGUCGGUAAUUGUU	18	5	275	10	5	18	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12948059-12948462	Cluster_1030	Pocillopora_meandrina_HIv1___Sc0000002	12948059	12948462	404	201	121	0.8059701492537313	+	UAUACCUUUGAUUCAUAGCCUUUCUGAUU	9	1	177	3	2	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12949693-12950122	Cluster_1031	Pocillopora_meandrina_HIv1___Sc0000002	12949693	12950122	430	220	72	0.022727272727272728	-	UAAGAUAUCGUUAACAACUCGAAGAAGCA	35	1	212	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12972851-12973278	Cluster_1032	Pocillopora_meandrina_HIv1___Sc0000002	12972851	12973278	428	312	173	0.5961538461538461	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	34	66	194	28	6	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13260092-13260514	Cluster_1033	Pocillopora_meandrina_HIv1___Sc0000002	13260092	13260514	423	127	49	0.14173228346456693	-	AUUCCGGUUACCGAGAUCUCGGU	42	5	18	6	15	80	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13280874-13281378	Cluster_1034	Pocillopora_meandrina_HIv1___Sc0000002	13280874	13281378	505	744	253	0.0	-	AGGAAGUGAUGUUGUAAUUUGCA	49	165	324	30	89	107	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13301878-13302293	Cluster_1035	Pocillopora_meandrina_HIv1___Sc0000002	13301878	13302293	416	125	58	0.424	.	UGACUACCAAUGGAACCAGAAAGUGACA	10	36	54	19	13	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13313713-13314217	Cluster_1036	Pocillopora_meandrina_HIv1___Sc0000002	13313713	13314217	505	1452	475	0.9993112947658402	+	AGGAAAUGAUGUUGUAAU	35	310	571	101	145	194	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13354138-13354564	Cluster_1037	Pocillopora_meandrina_HIv1___Sc0000002	13354138	13354564	427	150	49	0.02666666666666667	-	UUGGUGCAUUUCGAUCCUUGCUGUUCA	28	3	143	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13453547-13453972	Cluster_1038	Pocillopora_meandrina_HIv1___Sc0000002	13453547	13453972	426	193	52	0.3316062176165803	.	UGAUCUACAUGAAACUAUUCUCACACC	32	2	180	0	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13526667-13527088	Cluster_1039	Pocillopora_meandrina_HIv1___Sc0000002	13526667	13527088	422	855	36	0.0023391812865497076	-	CGGCCUGAAAAAAAAAAA	503	743	30	35	17	23	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13553543-13553957	Cluster_1040	Pocillopora_meandrina_HIv1___Sc0000002	13553543	13553957	415	97	22	0.0	-	CUUUCCGAGGUCACG	72	76	14	3	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13698198-13698628	Cluster_1041	Pocillopora_meandrina_HIv1___Sc0000002	13698198	13698628	431	1173	167	0.9982949701619779	+	UGUUCCAAUCUUUUGCAUUCUUGUAUC	214	2	1160	1	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13773137-13773566	Cluster_1042	Pocillopora_meandrina_HIv1___Sc0000002	13773137	13773566	430	850	60	0.021176470588235293	-	GUGUAGAUCAGCCGACUUCAACAUGUUUCA	340	1	833	5	1	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13812879-13813306	Cluster_1043	Pocillopora_meandrina_HIv1___Sc0000002	13812879	13813306	428	201	17	0.9950248756218906	+	UCGAGACGUGAGCUUGGGCCGCCUGUGA	145	0	200	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14200611-14201078	Cluster_1044	Pocillopora_meandrina_HIv1___Sc0000002	14200611	14201078	468	328	144	0.36585365853658536	.	AAUGGGAAAACGAGAAUAGCGUA	56	23	174	16	4	73	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14203895-14204319	Cluster_1045	Pocillopora_meandrina_HIv1___Sc0000002	14203895	14204319	425	109	50	0.12844036697247707	-	UGUAUUUGCUGAUCUAUUUGACAUCCUU	14	4	94	2	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14286365-14286773	Cluster_1046	Pocillopora_meandrina_HIv1___Sc0000002	14286365	14286773	409	111	74	0.990990990990991	+	GACGGAGAAAGUGGAGCA	11	29	34	13	6	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14380365-14380782	Cluster_1047	Pocillopora_meandrina_HIv1___Sc0000002	14380365	14380782	418	112	63	0.5714285714285714	.	UGGACUCACAGUCGGACGGU	13	86	3	18	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14495754-14496184	Cluster_1048	Pocillopora_meandrina_HIv1___Sc0000002	14495754	14496184	431	596	57	1.0	+	UACUAAGUAGGUGCCUUCGAGAUGUUUA	161	3	588	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14689147-14689571	Cluster_1049	Pocillopora_meandrina_HIv1___Sc0000002	14689147	14689571	425	103	32	0.009708737864077669	-	GUGACUGAAAAAAAAAAAAAAAAAAAAAA	8	4	76	4	3	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14748982-14749487	Cluster_1050	Pocillopora_meandrina_HIv1___Sc0000002	14748982	14749487	506	575	156	0.7304347826086957	.	UUGGAACGUGUUGCUGAACGCUUGCG	101	41	453	10	28	16	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14800682-14801119	Cluster_1051	Pocillopora_meandrina_HIv1___Sc0000002	14800682	14801119	438	3088	287	0.0016191709844559584	-	UGUGACUGAAAAGAUCUUGAAGGAAUUUA	1478	15	2682	30	19	63	279	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14803374-14803892	Cluster_1052	Pocillopora_meandrina_HIv1___Sc0000002	14803374	14803892	519	402	191	0.03980099502487562	-	AACACUGUCAUUGUUGAAUCAGAUGAAGAC	14	20	336	7	9	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14810100-14810529	Cluster_1053	Pocillopora_meandrina_HIv1___Sc0000002	14810100	14810529	430	241	101	0.4854771784232365	.	CACCCGGUCAAUUUUGCGUCAAAAAUAAUUU	24	6	192	3	4	6	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14815557-14815984	Cluster_1054	Pocillopora_meandrina_HIv1___Sc0000002	14815557	14815984	428	196	45	0.9795918367346939	+	UGAUUAAGAACGAUAAACUGGAACGUG	50	1	193	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14816225-14818006	Cluster_1055	Pocillopora_meandrina_HIv1___Sc0000002	14816225	14818006	1782	1792	646	0.7946428571428571	.	UGAGUCUUGGAUUGAAGUACGACAUCACGUG	80	13	1601	9	7	41	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14818052-14818453	Cluster_1056	Pocillopora_meandrina_HIv1___Sc0000002	14818052	14818453	402	154	100	0.5454545454545454	.	UAGAACUUAAUCUCACUCCUUGAAAAGG	7	3	146	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14818833-14819261	Cluster_1057	Pocillopora_meandrina_HIv1___Sc0000002	14818833	14819261	429	217	119	0.4470046082949309	.	GCAAAUCGAAAUGAUGGUCGACUCCGGUGC	14	3	207	0	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14914671-14915087	Cluster_1058	Pocillopora_meandrina_HIv1___Sc0000002	14914671	14915087	417	143	78	0.5454545454545454	.	UUAUUUCUACAUAGAGUGAGCUCACAC	26	13	101	7	2	17	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14921910-14922397	Cluster_1059	Pocillopora_meandrina_HIv1___Sc0000002	14921910	14922397	488	567	99	0.010582010582010581	-	UUCAGAAUGAUCCUAGAUACGAACAUAGUC	55	1	552	2	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14957498-14958006	Cluster_1060	Pocillopora_meandrina_HIv1___Sc0000002	14957498	14958006	509	3487	256	0.06681961571551477	-	UACAGAACUAGACAACUAUAACAUAACGACU	1467	48	3233	0	26	136	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15113131-15113640	Cluster_1061	Pocillopora_meandrina_HIv1___Sc0000002	15113131	15113640	510	656	159	0.8140243902439024	+	UCGGUUUUCGCAAUUCCAUUGAACGACA	76	7	619	1	6	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15290742-15291230	Cluster_1062	Pocillopora_meandrina_HIv1___Sc0000002	15290742	15291230	489	3303	445	1.0	+	CGUGACCUCUCUGAUCCUG	178	721	1669	325	177	212	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15324520-15325223	Cluster_1063	Pocillopora_meandrina_HIv1___Sc0000002	15324520	15325223	704	272	138	0.9227941176470589	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	24	1	258	0	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15326453-15326882	Cluster_1064	Pocillopora_meandrina_HIv1___Sc0000002	15326453	15326882	430	254	144	0.8622047244094488	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	26	2	233	0	1	2	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15410169-15410609	Cluster_1065	Pocillopora_meandrina_HIv1___Sc0000002	15410169	15410609	441	619	138	0.15024232633279483	-	UCCUUCACUCCAGAAUGUUUGGCCUCUU	75	4	559	2	4	29	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15749261-15749351	Cluster_1066	Pocillopora_meandrina_HIv1___Sc0000002	15749261	15749351	91	267	31	1.0	+	ACGCUAGGAAGGGAUGCCGGGA	162	9	4	32	201	19	2	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:15762578-15763408	Cluster_1067	Pocillopora_meandrina_HIv1___Sc0000002	15762578	15763408	831	4824	283	0.0	-	UGUUACCAGGUACUUCGCACUGA	1808	248	99	163	1312	2761	241	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15781900-15782431	Cluster_1068	Pocillopora_meandrina_HIv1___Sc0000002	15781900	15782431	532	482	158	0.0	-	AUGGAGGGUUAAGAAAGGGGAU	33	93	190	32	82	28	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15893987-15894539	Cluster_1069	Pocillopora_meandrina_HIv1___Sc0000002	15893987	15894539	553	235	78	0.8936170212765957	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	42	2	211	2	2	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15894892-15895490	Cluster_1070	Pocillopora_meandrina_HIv1___Sc0000002	15894892	15895490	599	1459	281	0.8012337217272104	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	488	6	1380	6	10	13	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15992066-15992491	Cluster_1071	Pocillopora_meandrina_HIv1___Sc0000002	15992066	15992491	426	256	131	0.94140625	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	23	1	238	1	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15992531-15993292	Cluster_1072	Pocillopora_meandrina_HIv1___Sc0000002	15992531	15993292	762	472	227	0.9152542372881356	+	UCCAAUCACACACAGUUCUCCUGCGGC	62	4	441	2	0	3	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15993376-15993916	Cluster_1073	Pocillopora_meandrina_HIv1___Sc0000002	15993376	15993916	541	353	139	0.6968838526912181	.	UGCUUCAUUUUGGUUCUGUAGUAACACA	64	9	261	1	39	23	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15994668-15996216	Cluster_1074	Pocillopora_meandrina_HIv1___Sc0000002	15994668	15996216	1549	3369	862	0.9287622439893143	+	UAAGAUUUACACACUGAUCGACCAUGU	866	28	3199	30	11	36	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16076887-16077338	Cluster_1075	Pocillopora_meandrina_HIv1___Sc0000002	16076887	16077338	452	5986	167	0.013197460741730706	-	AUCUGUGGUUUUUUUAGGGUGG	1784	1829	5	483	3400	251	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16084908-16085406	Cluster_1076	Pocillopora_meandrina_HIv1___Sc0000002	16084908	16085406	499	9603	505	1.0	+	CUGAGACGAAGCAAACUGAUAUUU	3552	179	2948	115	368	1492	4501	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16086692-16087210	Cluster_1077	Pocillopora_meandrina_HIv1___Sc0000002	16086692	16087210	519	1266	348	1.0	+	UGAGACGAAGCAAACUGAAAUUA	124	158	449	70	171	236	182	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16106559-16106650	Cluster_1078	Pocillopora_meandrina_HIv1___Sc0000002	16106559	16106650	92	2969	94	1.0	+	UGUUAUUUUUAUCGUCCAUUAGU	1172	1055	9	61	209	1607	28	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:16801047-16801473	Cluster_1079	Pocillopora_meandrina_HIv1___Sc0000002	16801047	16801473	427	222	132	0.11711711711711711	-	UGAGUCGAGGUUAUUCACAAUACGAGC	24	6	201	1	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16868237-16868878	Cluster_1080	Pocillopora_meandrina_HIv1___Sc0000002	16868237	16868878	642	532	254	0.0	-	AUCCGGCUCGAAGGACCA	71	103	410	2	6	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16938840-16939269	Cluster_1081	Pocillopora_meandrina_HIv1___Sc0000002	16938840	16939269	430	253	53	0.9920948616600791	+	UGAUCAAUUUGUGAAUGUCUGCACACCACU	88	1	251	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16988102-16988565	Cluster_1082	Pocillopora_meandrina_HIv1___Sc0000002	16988102	16988565	464	372	219	0.5188172043010753	.	UUUCGAGACGUCGCGACGGU	19	172	101	73	16	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16990790-16991219	Cluster_1083	Pocillopora_meandrina_HIv1___Sc0000002	16990790	16991219	430	161	72	0.9130434782608695	+	UGAUAUAAAUUACGUCAUAUGGAAUGUAUU	44	7	144	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17295508-17295925	Cluster_1084	Pocillopora_meandrina_HIv1___Sc0000002	17295508	17295925	418	493	4	0.0	-	CUUUGCUCUGAAGUGGAA	483	493	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17411375-17411793	Cluster_1085	Pocillopora_meandrina_HIv1___Sc0000002	17411375	17411793	419	314	230	0.9968152866242038	+	UUGGAUCGUGAGUAAGACGCA	7	98	116	27	34	14	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17612209-17612634	Cluster_1086	Pocillopora_meandrina_HIv1___Sc0000002	17612209	17612634	426	109	31	0.9908256880733946	+	UACUUAGCACUGUGACCUGGGCUGUCAG	22	0	100	1	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17612844-17613360	Cluster_1087	Pocillopora_meandrina_HIv1___Sc0000002	17612844	17613360	517	1104	183	0.9719202898550725	+	UGGAAUAUAGUCCAGGUCUUUCUGAU	172	16	1066	9	5	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17766802-17767230	Cluster_1088	Pocillopora_meandrina_HIv1___Sc0000002	17766802	17767230	429	123	48	0.991869918699187	+	UCAAGAUCUUCCUCUUUGUCGUACCCGGA	62	5	114	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17800801-17801407	Cluster_1089	Pocillopora_meandrina_HIv1___Sc0000002	17800801	17801407	607	394	167	0.6243654822335025	.	CGCAUCUUUAUCCAUCACUCAAAGCGGACU	56	8	331	1	0	12	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17801485-17802229	Cluster_1090	Pocillopora_meandrina_HIv1___Sc0000002	17801485	17802229	745	599	225	0.06844741235392321	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	53	2	580	5	3	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18043378-18043918	Cluster_1091	Pocillopora_meandrina_HIv1___Sc0000002	18043378	18043918	541	2187	250	1.0	+	GUGGUUUUAAUUCUUGUGAACAGGA	871	30	1802	33	65	84	173	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18085264-18085716	Cluster_1092	Pocillopora_meandrina_HIv1___Sc0000002	18085264	18085716	453	507	104	0.9684418145956607	+	UAACUAGAUUCCACAUCAACAUU	107	30	36	59	74	281	27	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18091100-18091512	Cluster_1093	Pocillopora_meandrina_HIv1___Sc0000002	18091100	18091512	413	112	76	0.008928571428571428	-	GAUAUGAACAAACGUGCUGGAGAGCU	6	38	54	1	9	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18236792-18237221	Cluster_1094	Pocillopora_meandrina_HIv1___Sc0000002	18236792	18237221	430	146	55	0.03424657534246575	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	35	0	143	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18758455-18759131	Cluster_1095	Pocillopora_meandrina_HIv1___Sc0000002	18758455	18759131	677	759	271	0.013175230566534914	-	UGUGAAUUUACUGACCAUCUCGACAUU	43	7	727	1	8	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18981108-18982283	Cluster_1096	Pocillopora_meandrina_HIv1___Sc0000002	18981108	18982283	1176	6856	1066	0.03894399066511085	-	UGAAAACUCUUUGCGAUCUCAUUUAUGG	444	22	6700	17	14	45	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19017321-19017749	Cluster_1097	Pocillopora_meandrina_HIv1___Sc0000002	19017321	19017749	429	105	25	0.0380952380952381	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	1	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19137193-19137621	Cluster_1098	Pocillopora_meandrina_HIv1___Sc0000002	19137193	19137621	429	220	113	0.41363636363636364	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	37	19	182	4	4	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19218595-19219029	Cluster_1099	Pocillopora_meandrina_HIv1___Sc0000002	19218595	19219029	435	530	102	0.9811320754716981	+	UGUUUCAACUCUUGAAUGAUUCUUGCUU	99	0	516	1	0	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19227899-19228326	Cluster_1100	Pocillopora_meandrina_HIv1___Sc0000002	19227899	19228326	428	146	44	0.8835616438356164	+	UUGUCUACAAGAAGCUUGACCAUUUUGU	54	3	140	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19229617-19230339	Cluster_1101	Pocillopora_meandrina_HIv1___Sc0000002	19229617	19230339	723	1789	299	0.17439910564561206	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	462	44	1694	12	11	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19435173-19435585	Cluster_1102	Pocillopora_meandrina_HIv1___Sc0000002	19435173	19435585	413	206	144	0.9223300970873787	+	GUGCGUCGUCAAGCUGUA	8	68	90	12	7	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19445465-19445890	Cluster_1103	Pocillopora_meandrina_HIv1___Sc0000002	19445465	19445890	426	232	138	0.9870689655172413	+	CAAGGCUGUGCUUUGUUGUAAUGUACU	18	45	125	15	19	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19537003-19537432	Cluster_1104	Pocillopora_meandrina_HIv1___Sc0000002	19537003	19537432	430	94	23	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	1	91	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19538138-19538717	Cluster_1105	Pocillopora_meandrina_HIv1___Sc0000002	19538138	19538717	580	3076	562	0.9996749024707412	+	UUGGAUUGUUGGAGUGAUGUGCA	328	708	1352	130	187	493	206	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19565330-19565759	Cluster_1106	Pocillopora_meandrina_HIv1___Sc0000002	19565330	19565759	430	277	67	0.0	-	GAAUGGAACAAAAGUCGAGGCAGUAUGUG	79	9	256	7	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:96476-96895	Cluster_1107	Pocillopora_meandrina_HIv1___Sc0000003	96476	96895	420	243	14	0.00823045267489712	-	CGGUCUGCAAUUUUGGGAGC	166	203	0	39	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:128499-128910	Cluster_1108	Pocillopora_meandrina_HIv1___Sc0000003	128499	128910	412	141	99	1.0	+	GUGGGCUGUGCCUUGGCU	8	47	44	19	14	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:174205-175182	Cluster_1109	Pocillopora_meandrina_HIv1___Sc0000003	174205	175182	978	800	270	0.0525	-	UGAUCAAGUUUCCUAUCGCCUGUAAACA	94	3	759	5	7	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:207738-208184	Cluster_1110	Pocillopora_meandrina_HIv1___Sc0000003	207738	208184	447	607	65	0.742998352553542	.	GCACCAAUCAGAGCUGUAGAAAAACAACU	216	6	594	1	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:295505-296483	Cluster_1111	Pocillopora_meandrina_HIv1___Sc0000003	295505	296483	979	1525	372	0.4340983606557377	.	UAAGCCUUUGGAACAACAUCAGUGACAA	123	34	1316	24	17	43	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:313572-314401	Cluster_1112	Pocillopora_meandrina_HIv1___Sc0000003	313572	314401	830	785	324	0.6292993630573248	.	GGACAUACCAAUUCUCGCAGACGU	74	5	587	0	10	35	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:314771-315207	Cluster_1113	Pocillopora_meandrina_HIv1___Sc0000003	314771	315207	437	504	158	0.13293650793650794	-	UCGACUUGUUAAACUCUUCCAUCUGAGUAGU	48	2	476	5	4	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:448959-449506	Cluster_1114	Pocillopora_meandrina_HIv1___Sc0000003	448959	449506	548	770	464	1.0	+	GAGCGAUGAUUAAACUAGAGAAAUGAGC	20	122	372	69	75	63	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:467252-467911	Cluster_1115	Pocillopora_meandrina_HIv1___Sc0000003	467252	467911	660	626	166	0.0	-	GAGCUGUGACGAAAUAUAUGU	107	116	175	161	97	33	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:495066-495158	Cluster_1116	Pocillopora_meandrina_HIv1___Sc0000003	495066	495158	93	990	64	1.0	+	UAUAUUGUACGACUCUCAUCGU	438	71	6	12	681	173	47	22	Y	spi-mir-temp-30_Stylophora_pistillata_Liew_et_al._2014_Close_match_of_nve-miR-2036.;Adi-Mir-2036_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2036-3p;_nve-miR-2036-3p;_spi-miR-temp-30;eca-nve-F-miR-2036_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;ami-nve-F-miR-2036-3p_Acropora_millepora_Praher_et_al._2021_NA;spi-nve-F-miR-2036_Stylophora_pistillata_Praher_et_al._2021_NA
Pocillopora_meandrina_HIv1___Sc0000003:788738-789165	Cluster_1117	Pocillopora_meandrina_HIv1___Sc0000003	788738	789165	428	170	61	0.023529411764705882	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	52	1	162	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:879187-879850	Cluster_1118	Pocillopora_meandrina_HIv1___Sc0000003	879187	879850	664	990	403	0.998989898989899	+	UGGAUAGCAUUGCAAGGGACAAUU	78	137	475	74	90	79	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1018753-1019619	Cluster_1119	Pocillopora_meandrina_HIv1___Sc0000003	1018753	1019619	867	1482	412	0.5553306342780027	.	UCUUUGUUGGAUUCAUCGUCUUUAGCUU	140	10	1317	31	12	29	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1364282-1364948	Cluster_1120	Pocillopora_meandrina_HIv1___Sc0000003	1364282	1364948	667	2762	1021	0.9742939898624186	+	GCUUAGCGCACGGUAGAGA	193	893	951	261	289	188	180	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1709656-1710326	Cluster_1121	Pocillopora_meandrina_HIv1___Sc0000003	1709656	1710326	671	565	386	0.9964601769911504	+	GUAGUUGGUUUCAGAAGU	7	118	238	40	64	53	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1751792-1752219	Cluster_1122	Pocillopora_meandrina_HIv1___Sc0000003	1751792	1752219	428	177	98	0.05649717514124294	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	21	3	130	7	3	13	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1752820-1753250	Cluster_1123	Pocillopora_meandrina_HIv1___Sc0000003	1752820	1753250	431	1272	132	0.01729559748427673	-	UGAAACUCUGGUCUGAAAAUAUUUGUC	588	18	1236	9	4	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1932935-1933362	Cluster_1124	Pocillopora_meandrina_HIv1___Sc0000003	1932935	1933362	428	516	46	0.9050387596899225	+	UUGGAACGUGUUGCUGAACGCUUGUUGC	367	8	496	1	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1934606-1935033	Cluster_1125	Pocillopora_meandrina_HIv1___Sc0000003	1934606	1935033	428	574	60	0.9912891986062717	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	300	7	566	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1936185-1936612	Cluster_1126	Pocillopora_meandrina_HIv1___Sc0000003	1936185	1936612	428	659	47	0.009104704097116844	-	UGAAACUCUGAUCUGAAAAUAUUUUUA	459	1	655	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2241887-2242315	Cluster_1127	Pocillopora_meandrina_HIv1___Sc0000003	2241887	2242315	429	195	24	0.9333333333333333	+	UGGUUUGAUUGUCAGCAGUAGAUGAAAUA	147	0	193	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2476590-2477024	Cluster_1128	Pocillopora_meandrina_HIv1___Sc0000003	2476590	2477024	435	63481	750	0.00012602195932641264	-	AGGAUGGACAGUGAUUCAGAAA	27983	14473	16504	488	31712	104	200	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2614870-2615287	Cluster_1129	Pocillopora_meandrina_HIv1___Sc0000003	2614870	2615287	418	95	1	0.0	-	UUGAACUCGACCCUGUCG	95	95	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2620719-2621157	Cluster_1130	Pocillopora_meandrina_HIv1___Sc0000003	2620719	2621157	439	512	160	0.9375	+	UCAGUGACUUUUGAGACUAUUGGUAAUAAU	102	11	483	1	10	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2622155-2622587	Cluster_1131	Pocillopora_meandrina_HIv1___Sc0000003	2622155	2622587	433	233	91	0.871244635193133	+	UGCUCUCGUUGUUGACUGAAGAAUCCAGCC	27	2	225	1	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2627197-2627614	Cluster_1132	Pocillopora_meandrina_HIv1___Sc0000003	2627197	2627614	418	106	3	0.9811320754716981	+	UUGAACUCGACCCUGUCG	104	104	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2645319-2645747	Cluster_1133	Pocillopora_meandrina_HIv1___Sc0000003	2645319	2645747	429	142	68	0.9859154929577465	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	34	1	140	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2763211-2763632	Cluster_1134	Pocillopora_meandrina_HIv1___Sc0000003	2763211	2763632	422	105	26	0.0	-	UAAUUGUGAUUUUGUACUGUAGAAUAUCCA	17	25	57	6	7	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2763676-2764158	Cluster_1135	Pocillopora_meandrina_HIv1___Sc0000003	2763676	2764158	483	193911	1502	0.999912330914698	+	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	85530	3874	188991	261	191	240	354	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2849464-2849939	Cluster_1136	Pocillopora_meandrina_HIv1___Sc0000003	2849464	2849939	476	371	141	0.005390835579514825	-	AGCUGGUGCUGGCCCAUCUAACUACAAGGU	119	29	317	4	6	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3008153-3009652	Cluster_1137	Pocillopora_meandrina_HIv1___Sc0000003	3008153	3009652	1500	13524	1414	0.11431529133392487	-	UUGGCUAGUAGCAUUCUUUCUGAUGGCU	1767	49	12653	45	120	148	509	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3012955-3013651	Cluster_1138	Pocillopora_meandrina_HIv1___Sc0000003	3012955	3013651	697	1243	481	0.2236524537409493	.	UGUUGUCCUUUGUUCAGUCUGAUUAACC	59	14	1124	12	9	37	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3014086-3014511	Cluster_1139	Pocillopora_meandrina_HIv1___Sc0000003	3014086	3014511	426	105	31	0.9714285714285714	+	GUUGACGUGAACGGUGUUAGAUGCCGAGC	39	0	99	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3014762-3015310	Cluster_1140	Pocillopora_meandrina_HIv1___Sc0000003	3014762	3015310	549	326	162	0.03680981595092025	-	UGAAUUCUUCGUAAACGGUUUCCUGGUC	26	2	311	0	2	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3015890-3016320	Cluster_1141	Pocillopora_meandrina_HIv1___Sc0000003	3015890	3016320	431	282	68	0.014184397163120567	-	UAUAUCUUCUUCGGACGCCCACGGCGCGCGA	72	0	277	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3033168-3033615	Cluster_1142	Pocillopora_meandrina_HIv1___Sc0000003	3033168	3033615	448	264	107	0.10606060606060606	-	UUCAAGCUCUUCUGGACUAGCAAUCUGCA	31	3	242	5	4	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3033675-3034111	Cluster_1143	Pocillopora_meandrina_HIv1___Sc0000003	3033675	3034111	437	435	167	0.26436781609195403	.	UGCUUCUCAUAGUCUGUUGGGUUCUUAAC	99	4	400	3	3	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3035419-3036545	Cluster_1144	Pocillopora_meandrina_HIv1___Sc0000003	3035419	3036545	1127	4724	728	0.31879762912785775	.	UCUAGAGACAUCAUCCCUGUGUAGAAACU	717	29	3926	34	130	121	484	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3036789-3037216	Cluster_1145	Pocillopora_meandrina_HIv1___Sc0000003	3036789	3037216	428	89	23	0.02247191011235955	-	UCGAAAUUGUUGUACUGCUGGAGUCGCA	38	0	84	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3048099-3049557	Cluster_1146	Pocillopora_meandrina_HIv1___Sc0000003	3048099	3049557	1459	2148	540	0.19320297951582868	-	UCUUUCUGGUUUUGUUUUUCGACGUAUC	153	20	1917	20	19	28	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3062518-3063922	Cluster_1147	Pocillopora_meandrina_HIv1___Sc0000003	3062518	3063922	1405	2294	683	0.15649520488230165	-	UGAAGAACAGAAUAUGGGUAGUCCAUGG	177	15	2113	12	11	39	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3187005-3187432	Cluster_1148	Pocillopora_meandrina_HIv1___Sc0000003	3187005	3187432	428	76	21	0.02631578947368421	-	CGAUCCAACAAGAACAAUAUGUGCUGACU	23	0	76	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3212023-3212452	Cluster_1149	Pocillopora_meandrina_HIv1___Sc0000003	3212023	3212452	430	178	46	0.06179775280898876	-	UCAGGCCAUGACUCUACAUCUGCUAGUAGC	38	1	165	0	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3214049-3214562	Cluster_1150	Pocillopora_meandrina_HIv1___Sc0000003	3214049	3214562	514	292	87	0.5958904109589042	.	AGAAAUACUAGCUGUUCAACUCAACAA	65	9	267	4	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3216170-3216596	Cluster_1151	Pocillopora_meandrina_HIv1___Sc0000003	3216170	3216596	427	73	22	0.0136986301369863	-	UUAUUUCCUUGUAUUUCUUUAGAACUUGUA	17	0	72	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3221775-3222319	Cluster_1152	Pocillopora_meandrina_HIv1___Sc0000003	3221775	3222319	545	531	163	0.7947269303201506	.	UCGAUGUUACUGUCCGUUCUCCGUUGA	90	1	438	11	7	46	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3228849-3229281	Cluster_1153	Pocillopora_meandrina_HIv1___Sc0000003	3228849	3229281	433	803	85	0.9987546699875467	+	CUUGGAAGUGUUAUCUGCCGGUCGGCCUUU	395	8	771	4	5	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3303171-3303600	Cluster_1154	Pocillopora_meandrina_HIv1___Sc0000003	3303171	3303600	430	1728	77	0.0	-	CGAUCCAACAAGAACAAUAUGUGCUGACU	1394	0	1724	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3347350-3347773	Cluster_1155	Pocillopora_meandrina_HIv1___Sc0000003	3347350	3347773	424	153	65	0.49019607843137253	.	AGAUACAAAAUGGUCAAGGUUCUUGUUG	19	5	134	0	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3438712-3439139	Cluster_1156	Pocillopora_meandrina_HIv1___Sc0000003	3438712	3439139	428	173	60	0.9653179190751445	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	47	3	160	0	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3439687-3440218	Cluster_1157	Pocillopora_meandrina_HIv1___Sc0000003	3439687	3440218	532	393	137	0.8396946564885496	+	UGUUGGCUGCAUUCUUUUAAAAGACGU	49	10	325	1	4	26	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3758358-3758770	Cluster_1158	Pocillopora_meandrina_HIv1___Sc0000003	3758358	3758770	413	130	91	0.007692307692307693	-	CGUCUGCAUCCUCGAGCA	5	34	51	13	15	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3760950-3761352	Cluster_1159	Pocillopora_meandrina_HIv1___Sc0000003	3760950	3761352	403	105	66	0.0	-	CAUGCAGAUCUUUGUCAAAACCCU	7	37	34	8	6	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3989630-3990137	Cluster_1160	Pocillopora_meandrina_HIv1___Sc0000003	3989630	3990137	508	325	162	0.2923076923076923	.	UUGUGGUUCAAUGGGAAAACGAGAACA	24	9	201	6	7	22	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3990736-3991161	Cluster_1161	Pocillopora_meandrina_HIv1___Sc0000003	3990736	3991161	426	72	16	0.013888888888888888	-	UGAAACUCUGAUCUGAAAAUAUUUUU	33	0	72	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4427878-4428306	Cluster_1162	Pocillopora_meandrina_HIv1___Sc0000003	4427878	4428306	429	174	59	0.04597701149425287	-	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	52	9	156	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4502940-4503367	Cluster_1163	Pocillopora_meandrina_HIv1___Sc0000003	4502940	4503367	428	184	69	0.907608695652174	+	UUAAAUGGCUUGUAAUGACUAAUAAACA	41	0	182	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4503526-4504274	Cluster_1164	Pocillopora_meandrina_HIv1___Sc0000003	4503526	4504274	749	1069	403	0.6800748362956034	.	CUACAGAAAAUACAAACCGAUUGU	56	8	930	3	9	8	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4505327-4506570	Cluster_1165	Pocillopora_meandrina_HIv1___Sc0000003	4505327	4506570	1244	5156	1048	0.8496896819239721	+	UCCGUGUCAACAUAUUGUAUUUCAAAGU	564	17	4808	14	49	125	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4619797-4620224	Cluster_1166	Pocillopora_meandrina_HIv1___Sc0000003	4619797	4620224	428	169	65	0.029585798816568046	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	46	4	158	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4842828-4843448	Cluster_1167	Pocillopora_meandrina_HIv1___Sc0000003	4842828	4843448	621	535	175	0.028037383177570093	-	UGAUAAUGUUUGAAAGCUGUUGCUGUUC	107	2	525	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4945307-4945849	Cluster_1168	Pocillopora_meandrina_HIv1___Sc0000003	4945307	4945849	543	610	231	0.13934426229508196	-	UGAAAAACCUUCCACGUCAAUCUGGCUCAGA	76	0	573	4	6	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4946513-4946940	Cluster_1169	Pocillopora_meandrina_HIv1___Sc0000003	4946513	4946940	428	195	72	0.0	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	39	2	188	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5028952-5029429	Cluster_1170	Pocillopora_meandrina_HIv1___Sc0000003	5028952	5029429	478	763	203	0.0	-	CUAGAUAGUAUCUGACACUG	65	156	417	39	19	71	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5030876-5031354	Cluster_1171	Pocillopora_meandrina_HIv1___Sc0000003	5030876	5031354	479	1674	410	0.0	-	AGUGAAUGAUGUAAAAUUCUGGGUUGCA	126	435	863	115	68	103	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5148334-5148807	Cluster_1172	Pocillopora_meandrina_HIv1___Sc0000003	5148334	5148807	474	339	123	0.0	-	GUGGCUCGUAAUUUUGACUCAAAUAUGG	96	45	238	8	11	10	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5182536-5182959	Cluster_1173	Pocillopora_meandrina_HIv1___Sc0000003	5182536	5182959	424	228	161	0.9956140350877193	+	GUUGUUUACUGACUGGAUGAUAGCUGU	11	36	114	22	18	16	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5372310-5372735	Cluster_1174	Pocillopora_meandrina_HIv1___Sc0000003	5372310	5372735	426	293	122	0.8395904436860068	+	UGUGAAUCUUUUUACUCGUUAUGUUA	46	13	263	9	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5692287-5693120	Cluster_1175	Pocillopora_meandrina_HIv1___Sc0000003	5692287	5693120	834	586	236	0.9453924914675768	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	47	3	568	1	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5694636-5695065	Cluster_1176	Pocillopora_meandrina_HIv1___Sc0000003	5694636	5695065	430	233	130	0.22317596566523606	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	14	1	212	0	3	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5755578-5756010	Cluster_1177	Pocillopora_meandrina_HIv1___Sc0000003	5755578	5756010	433	444	84	0.9977477477477478	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	78	2	441	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5760138-5760610	Cluster_1178	Pocillopora_meandrina_HIv1___Sc0000003	5760138	5760610	473	67261	940	1.4867456624195298e-05	-	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	28502	1190	65755	67	47	65	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5831350-5831779	Cluster_1179	Pocillopora_meandrina_HIv1___Sc0000003	5831350	5831779	430	99	22	0.98989898989899	+	UUAUGAGUGAACCUUUCAUCGAGAAACAUG	56	0	98	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5911110-5911540	Cluster_1180	Pocillopora_meandrina_HIv1___Sc0000003	5911110	5911540	431	2510	145	0.9952191235059761	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCA	657	2	2496	0	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5965071-5965586	Cluster_1181	Pocillopora_meandrina_HIv1___Sc0000003	5965071	5965586	516	386	215	0.0	-	CUCCGUCUGUGGUGAGCA	22	86	189	35	29	21	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5965723-5966238	Cluster_1182	Pocillopora_meandrina_HIv1___Sc0000003	5965723	5966238	516	373	255	0.002680965147453083	-	ACAACUCGGGCGAGAUUCA	23	115	121	42	32	39	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6019954-6020383	Cluster_1183	Pocillopora_meandrina_HIv1___Sc0000003	6019954	6020383	430	222	145	0.9864864864864865	+	GAAGAUUGCGGGUUCGAGUCCCGUCGGAGGU	7	94	79	18	10	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6328548-6328949	Cluster_1184	Pocillopora_meandrina_HIv1___Sc0000003	6328548	6328949	402	142	101	1.0	+	AGACGAGUGAGAGAAAAGACA	6	27	69	16	11	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6386367-6386828	Cluster_1185	Pocillopora_meandrina_HIv1___Sc0000003	6386367	6386828	462	463	283	0.0021598272138228943	-	UCUGUUGUGUCUGAAAGGCUGA	15	125	137	51	60	44	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6424799-6425229	Cluster_1186	Pocillopora_meandrina_HIv1___Sc0000003	6424799	6425229	431	549	61	1.0	+	UGACAAUCAUGCUGCUAAGUUCCUACGC	147	0	545	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6569728-6570155	Cluster_1187	Pocillopora_meandrina_HIv1___Sc0000003	6569728	6570155	428	189	70	0.0	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	29	2	182	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6670538-6670966	Cluster_1188	Pocillopora_meandrina_HIv1___Sc0000003	6670538	6670966	429	219	56	0.9452054794520548	+	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	48	44	161	7	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6672454-6672917	Cluster_1189	Pocillopora_meandrina_HIv1___Sc0000003	6672454	6672917	464	1058	200	0.9914933837429112	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	415	41	960	13	22	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6767976-6768388	Cluster_1190	Pocillopora_meandrina_HIv1___Sc0000003	6767976	6768388	413	174	133	0.0	-	GUGACGUGUGAAUGCCAAACCGGUGAAUA	5	32	86	14	11	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6774529-6774948	Cluster_1191	Pocillopora_meandrina_HIv1___Sc0000003	6774529	6774948	420	167	102	0.0	-	CGGAACGGAACAUGUUUGUU	14	26	71	18	14	29	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6775676-6776091	Cluster_1192	Pocillopora_meandrina_HIv1___Sc0000003	6775676	6776091	416	91	49	0.0	-	GCGGUUCAGAGAAGUAGACA	9	24	23	5	16	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6885701-6886302	Cluster_1193	Pocillopora_meandrina_HIv1___Sc0000003	6885701	6886302	602	689	387	0.760522496371553	.	CGGCUAUAAUGGGAAACCCUGU	29	314	110	109	86	46	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6910359-6911008	Cluster_1194	Pocillopora_meandrina_HIv1___Sc0000003	6910359	6911008	650	352	160	0.9318181818181818	+	UCUACUUCGGAGCCUAGACGU	17	129	108	63	14	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6988889-6989345	Cluster_1195	Pocillopora_meandrina_HIv1___Sc0000003	6988889	6989345	457	212	88	0.8867924528301887	+	UAUAAAGAUGUUCAUCGGCCCAGUGGCGUGA	23	3	184	1	2	1	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7133223-7133650	Cluster_1196	Pocillopora_meandrina_HIv1___Sc0000003	7133223	7133650	428	163	59	0.006134969325153374	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	0	158	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7244498-7244926	Cluster_1197	Pocillopora_meandrina_HIv1___Sc0000003	7244498	7244926	429	263	85	0.9505703422053232	+	UACAAACAACAGAACGUUCGAACGGCU	47	8	244	1	3	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7299311-7299716	Cluster_1198	Pocillopora_meandrina_HIv1___Sc0000003	7299311	7299716	406	163	130	0.024539877300613498	-	GAUGUGAACUUAGACUCCCUAGAU	5	28	74	16	9	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7299821-7300240	Cluster_1199	Pocillopora_meandrina_HIv1___Sc0000003	7299821	7300240	420	386	277	0.0	-	CGUUUGUUGGUCCCUCAAAGGUU	7	88	159	42	32	25	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7300249-7300656	Cluster_1200	Pocillopora_meandrina_HIv1___Sc0000003	7300249	7300656	408	230	159	0.0	-	UAACGCAAGUAGAAUAGA	11	55	100	16	17	13	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7353741-7354272	Cluster_1201	Pocillopora_meandrina_HIv1___Sc0000003	7353741	7354272	532	358	244	1.0	+	CUUUCGGCUUCCUCAGGA	12	115	160	21	29	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7408170-7409498	Cluster_1202	Pocillopora_meandrina_HIv1___Sc0000003	7408170	7409498	1329	1752	1159	0.00228310502283105	-	GAUACUGCUAGUUUUGUUACA	15	397	790	141	150	121	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7409540-7409952	Cluster_1203	Pocillopora_meandrina_HIv1___Sc0000003	7409540	7409952	413	184	127	0.0	-	CAUGGACUUCCAGGAAGAUU	5	60	59	16	11	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7410474-7410907	Cluster_1204	Pocillopora_meandrina_HIv1___Sc0000003	7410474	7410907	434	415	285	0.0	-	CAUCUGUGUGUGUUGAGAAAAACU	12	107	173	32	37	38	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7411420-7411846	Cluster_1205	Pocillopora_meandrina_HIv1___Sc0000003	7411420	7411846	427	301	221	0.0	-	UUUAGAGGCUGAACUGGACGAGCCACU	8	61	138	26	24	27	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7412367-7413218	Cluster_1206	Pocillopora_meandrina_HIv1___Sc0000003	7412367	7413218	852	848	547	0.007075471698113208	-	UUAACGAUCGACUCGUCUUGUUGCCA	8	150	388	62	84	68	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7599802-7601072	Cluster_1207	Pocillopora_meandrina_HIv1___Sc0000003	7599802	7601072	1271	2943	897	0.527013251783894	.	UUGGAUCCAUUUACACUUUGUAAUCUGUG	200	46	2646	55	24	50	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7622721-7623130	Cluster_1208	Pocillopora_meandrina_HIv1___Sc0000003	7622721	7623130	410	126	58	0.23809523809523808	.	UAAAUCCACCACAGUCCAUAAAUUUGUCAGA	19	0	109	2	2	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7626252-7626678	Cluster_1209	Pocillopora_meandrina_HIv1___Sc0000003	7626252	7626678	427	187	100	0.9625668449197861	+	UGACUGUGUUCCGCCUGUUAUUGUCACC	13	5	166	2	4	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7633872-7634301	Cluster_1210	Pocillopora_meandrina_HIv1___Sc0000003	7633872	7634301	430	197	66	0.9086294416243654	+	UAAGAUAUCGUUAACAACUCGAAGAAGCG	31	1	191	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7659437-7659861	Cluster_1211	Pocillopora_meandrina_HIv1___Sc0000003	7659437	7659861	425	132	36	0.9848484848484849	+	AAGAUAACCAAUGAAUUCAGCUAAAAAGA	23	3	86	1	1	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7947458-7947877	Cluster_1212	Pocillopora_meandrina_HIv1___Sc0000003	7947458	7947877	420	266	152	0.0	-	GUUAAGGUUAAGAGCUCCA	25	93	133	9	14	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7948713-7949136	Cluster_1213	Pocillopora_meandrina_HIv1___Sc0000003	7948713	7949136	424	346	255	0.002890173410404624	-	AAUCGAGCUAGACGAUGCCAAGAGGGCUCU	6	57	149	35	32	32	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7955162-7955577	Cluster_1214	Pocillopora_meandrina_HIv1___Sc0000003	7955162	7955577	416	280	194	0.0035714285714285713	-	GGAGGAGAUCUUGAACCUGCA	39	60	94	60	20	31	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8175305-8175722	Cluster_1215	Pocillopora_meandrina_HIv1___Sc0000003	8175305	8175722	418	96	10	1.0	+	GCUACUUUGACCUCAUUUA	39	94	0	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8251830-8252248	Cluster_1216	Pocillopora_meandrina_HIv1___Sc0000003	8251830	8252248	419	72	22	0.9861111111111112	+	GUGGUGAUGAACUUUGAGA	13	24	25	8	3	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8266188-8266656	Cluster_1217	Pocillopora_meandrina_HIv1___Sc0000003	8266188	8266656	469	525	210	0.0	-	CGGCUGUUAACCGAAAGGUUGGU	49	166	117	40	57	97	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8314379-8314796	Cluster_1218	Pocillopora_meandrina_HIv1___Sc0000003	8314379	8314796	418	1206	8	0.9991708126036484	+	UUUGUAGGCUCUAACAGC	1186	1205	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8365220-8365649	Cluster_1219	Pocillopora_meandrina_HIv1___Sc0000003	8365220	8365649	430	216	81	1.0	+	UCUUGAAGCCUUAUCUGCUAGUUUACCUG	45	28	172	7	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8389908-8390326	Cluster_1220	Pocillopora_meandrina_HIv1___Sc0000003	8389908	8390326	419	154	113	1.0	+	CUCGGUGAUCUAGAAACGUAAAAA	6	37	78	6	12	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8391648-8392053	Cluster_1221	Pocillopora_meandrina_HIv1___Sc0000003	8391648	8392053	406	219	171	0.9954337899543378	+	UCUUUGAAGAUUUUCAGGAUGAAGGAUA	7	59	100	14	9	24	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8392372-8393246	Cluster_1222	Pocillopora_meandrina_HIv1___Sc0000003	8392372	8393246	875	1230	728	0.9926829268292683	+	UGAAGACUUUGCAGAAGAUUCUGUCUGUGGA	25	295	553	115	112	86	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8442393-8443321	Cluster_1223	Pocillopora_meandrina_HIv1___Sc0000003	8442393	8443321	929	6666	423	0.454995499549955	.	UCUUGAACCAAUCUACGACAGACUGAGU	1836	36	6447	50	9	28	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8459705-8460134	Cluster_1224	Pocillopora_meandrina_HIv1___Sc0000003	8459705	8460134	430	661	149	0.9924357034795764	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	131	0	658	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8619933-8620351	Cluster_1225	Pocillopora_meandrina_HIv1___Sc0000003	8619933	8620351	419	144	87	0.4930555555555556	.	UUCCGCGUCGAUUGUGUCCAUU	16	62	6	45	25	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8622404-8623297	Cluster_1226	Pocillopora_meandrina_HIv1___Sc0000003	8622404	8623297	894	542	258	0.37822878228782286	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	57	36	444	18	10	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8648201-8648647	Cluster_1227	Pocillopora_meandrina_HIv1___Sc0000003	8648201	8648647	447	429	194	0.16783216783216784	-	UAUGACGUUCCAGAAUCUUUGACAAAA	39	4	405	3	5	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8649171-8649599	Cluster_1228	Pocillopora_meandrina_HIv1___Sc0000003	8649171	8649599	429	142	53	0.007042253521126761	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	24	1	136	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8658110-8658528	Cluster_1229	Pocillopora_meandrina_HIv1___Sc0000003	8658110	8658528	419	1835	22	1.0	+	AAUCGGCCGUGGAUUGGU	1542	1833	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8680823-8681250	Cluster_1230	Pocillopora_meandrina_HIv1___Sc0000003	8680823	8681250	428	210	87	0.0380952380952381	-	UGACGUCCAAACGAGCCUGAUCUUGAUG	23	0	206	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8682430-8682830	Cluster_1231	Pocillopora_meandrina_HIv1___Sc0000003	8682430	8682830	401	222	125	0.013513513513513514	-	UGCUUCGCUAAAAUUACUCUCCUCUUGAGC	12	7	209	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8695585-8696014	Cluster_1232	Pocillopora_meandrina_HIv1___Sc0000003	8695585	8696014	430	837	68	0.998805256869773	+	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	444	2	834	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8780641-8782413	Cluster_1233	Pocillopora_meandrina_HIv1___Sc0000003	8780641	8782413	1773	2792	1079	0.9609598853868195	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	84	27	2641	8	27	38	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8905394-8905822	Cluster_1234	Pocillopora_meandrina_HIv1___Sc0000003	8905394	8905822	429	173	50	0.9884393063583815	+	UUCCUGCAUCUGUUGAGCCUUCUGACAGU	30	2	168	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8907631-8908059	Cluster_1235	Pocillopora_meandrina_HIv1___Sc0000003	8907631	8908059	429	164	56	1.0	+	UAGGUUCUUGUGGAACAACCAGUUGUGCA	42	0	160	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8915298-8915727	Cluster_1236	Pocillopora_meandrina_HIv1___Sc0000003	8915298	8915727	430	239	67	0.9497907949790795	+	CGAAUUCCAAACACCGAACCGCUUUUUGUG	36	5	220	0	5	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8916613-8917188	Cluster_1237	Pocillopora_meandrina_HIv1___Sc0000003	8916613	8917188	576	375	152	0.22933333333333333	.	UAUCUAUGGCUGACUAUGUCAGUGUCUCU	24	13	337	5	2	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8920685-8921364	Cluster_1238	Pocillopora_meandrina_HIv1___Sc0000003	8920685	8921364	680	3471	443	0.9086718524920772	+	UAAGACCCAUCCAUUGCUAUCAAUUCGC	464	21	3252	32	10	31	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8969736-8970166	Cluster_1239	Pocillopora_meandrina_HIv1___Sc0000003	8969736	8970166	431	282	109	0.04609929078014184	-	UGAAGAUUCUCAAAGGUUGCUGAUAACUGGC	27	4	267	0	5	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9071829-9072246	Cluster_1240	Pocillopora_meandrina_HIv1___Sc0000003	9071829	9072246	418	545	14	0.0	-	GACUUGAAGCGGUUGGAA	452	545	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9149634-9150114	Cluster_1241	Pocillopora_meandrina_HIv1___Sc0000003	9149634	9150114	481	590	178	0.8728813559322034	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	55	12	348	16	8	69	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9291034-9292771	Cluster_1242	Pocillopora_meandrina_HIv1___Sc0000003	9291034	9292771	1738	2819	1088	0.9592053919829727	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	108	17	2671	18	20	40	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9403760-9404177	Cluster_1243	Pocillopora_meandrina_HIv1___Sc0000003	9403760	9404177	418	352	15	0.0	-	AAUCGGCCGUGGAUUUGU	283	351	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9521091-9521514	Cluster_1244	Pocillopora_meandrina_HIv1___Sc0000003	9521091	9521514	424	92	39	0.9891304347826086	+	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	16	0	90	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9565787-9566383	Cluster_1245	Pocillopora_meandrina_HIv1___Sc0000003	9565787	9566383	597	5630	498	0.9959147424511545	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	838	9	5568	5	5	10	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9657566-9657996	Cluster_1246	Pocillopora_meandrina_HIv1___Sc0000003	9657566	9657996	431	414	100	0.9565217391304348	+	UGAGUGAGAUAAAUGAAAACCUUUGGAGA	54	0	408	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9699669-9700425	Cluster_1247	Pocillopora_meandrina_HIv1___Sc0000003	9699669	9700425	757	1510	307	0.9119205298013245	+	UGAGUGAGAUAAAUGAAAACCUUUGGAGA	94	42	1325	18	10	27	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9709233-9709736	Cluster_1248	Pocillopora_meandrina_HIv1___Sc0000003	9709233	9709736	504	3811	248	0.9918656520598268	+	UGGAACAACCUUUCGACUGACGAUCUC	822	12	3737	3	34	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9744415-9744843	Cluster_1249	Pocillopora_meandrina_HIv1___Sc0000003	9744415	9744843	429	263	137	0.39543726235741444	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	54	23	211	5	5	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9751847-9752327	Cluster_1250	Pocillopora_meandrina_HIv1___Sc0000003	9751847	9752327	481	6324	277	0.9995256166982922	+	UGUAUCGAUGUAAUCUCUCCAGUUUGUGUU	1669	67	6206	7	1	10	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9758869-9759298	Cluster_1251	Pocillopora_meandrina_HIv1___Sc0000003	9758869	9759298	430	904	145	0.0	-	UACAUGUCUCGGGGUAGCCGAUCUCGGA	273	9	891	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9759467-9759872	Cluster_1252	Pocillopora_meandrina_HIv1___Sc0000003	9759467	9759872	406	332	128	0.0030120481927710845	-	UGCGAACGGUAGAUUUAUGAUGAAAUGCAU	33	9	311	1	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9762294-9762711	Cluster_1253	Pocillopora_meandrina_HIv1___Sc0000003	9762294	9762711	418	117	71	0.6581196581196581	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	16	2	101	2	4	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9768332-9768759	Cluster_1254	Pocillopora_meandrina_HIv1___Sc0000003	9768332	9768759	428	139	47	0.03597122302158273	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	40	1	135	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9777949-9778366	Cluster_1255	Pocillopora_meandrina_HIv1___Sc0000003	9777949	9778366	418	86	41	0.10465116279069768	-	GUACACAAUAUUGGCCAAGAUUCUGAAA	15	0	73	4	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9784037-9784444	Cluster_1256	Pocillopora_meandrina_HIv1___Sc0000003	9784037	9784444	408	69	20	0.8840579710144928	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	43	0	66	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9784980-9785408	Cluster_1257	Pocillopora_meandrina_HIv1___Sc0000003	9784980	9785408	429	108	21	0.9907407407407407	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	48	1	107	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9795699-9796507	Cluster_1258	Pocillopora_meandrina_HIv1___Sc0000003	9795699	9796507	809	14834	863	0.0012134286099501146	-	UCGAAGACUCUAGACGGCGGAAGCCUCUUU	2373	51	14664	24	29	21	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9799382-9799800	Cluster_1259	Pocillopora_meandrina_HIv1___Sc0000003	9799382	9799800	419	115	66	0.9391304347826087	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	15	0	108	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9800891-9801315	Cluster_1260	Pocillopora_meandrina_HIv1___Sc0000003	9800891	9801315	425	146	94	0.863013698630137	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	7	1	130	0	3	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9801368-9801777	Cluster_1261	Pocillopora_meandrina_HIv1___Sc0000003	9801368	9801777	410	87	42	0.7126436781609196	.	UGAGAUCUUUUUAGCUUGAGUUUGUUGA	23	1	77	0	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9807539-9807963	Cluster_1262	Pocillopora_meandrina_HIv1___Sc0000003	9807539	9807963	425	106	42	0.0	-	UUGUGCUGUUCUGUUUCUGCCAAUAGC	20	0	103	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9810528-9811421	Cluster_1263	Pocillopora_meandrina_HIv1___Sc0000003	9810528	9811421	894	55147	1283	9.066676337788093e-05	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	15302	32	54972	17	31	15	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9829639-9830066	Cluster_1264	Pocillopora_meandrina_HIv1___Sc0000003	9829639	9830066	428	146	54	0.02054794520547945	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	52	2	143	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9840509-9840938	Cluster_1265	Pocillopora_meandrina_HIv1___Sc0000003	9840509	9840938	430	132	37	0.9696969696969697	+	UGUGUACUUUUGGUAGGUGGUAAUCAAAGU	74	0	129	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9842982-9843409	Cluster_1266	Pocillopora_meandrina_HIv1___Sc0000003	9842982	9843409	428	103	35	0.009708737864077669	-	UUGGAAUUCGAAGCAAGUAACAACCGACA	12	0	102	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9872204-9873180	Cluster_1267	Pocillopora_meandrina_HIv1___Sc0000003	9872204	9873180	977	2138	389	0.001403180542563143	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	392	6	2128	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9891466-9891893	Cluster_1268	Pocillopora_meandrina_HIv1___Sc0000003	9891466	9891893	428	144	60	0.013888888888888888	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	38	1	143	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9902335-9902764	Cluster_1269	Pocillopora_meandrina_HIv1___Sc0000003	9902335	9902764	430	139	29	0.935251798561151	+	UGUGUACUUUUGGUAGGUGGUAAUCAAAGU	86	0	138	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9904807-9905235	Cluster_1270	Pocillopora_meandrina_HIv1___Sc0000003	9904807	9905235	429	125	38	0.016	-	UUGGAAUUCGAAGCAAGUAACAACCGACA	24	0	124	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9912132-9912559	Cluster_1271	Pocillopora_meandrina_HIv1___Sc0000003	9912132	9912559	428	83	21	0.963855421686747	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	54	0	80	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9920702-9921127	Cluster_1272	Pocillopora_meandrina_HIv1___Sc0000003	9920702	9921127	426	115	26	0.06086956521739131	-	CGCUACAACAAGAUGUGAGUACUGUG	35	0	111	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9932440-9933416	Cluster_1273	Pocillopora_meandrina_HIv1___Sc0000003	9932440	9933416	977	2068	385	0.00048355899419729207	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	351	1	2060	0	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9935602-9936183	Cluster_1274	Pocillopora_meandrina_HIv1___Sc0000003	9935602	9936183	582	697	276	0.7144906743185079	.	UGGAAAGUUGUAAAAUUAAGGCUGUACGG	33	7	620	3	4	14	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9944352-9944779	Cluster_1275	Pocillopora_meandrina_HIv1___Sc0000003	9944352	9944779	428	128	37	0.015625	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	51	1	126	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9973243-9973662	Cluster_1276	Pocillopora_meandrina_HIv1___Sc0000003	9973243	9973662	420	128	76	0.171875	-	AGCCGAGCUCGAUUCAUGUUC	8	65	2	48	9	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9987992-9988420	Cluster_1277	Pocillopora_meandrina_HIv1___Sc0000003	9987992	9988420	429	305	65	0.8590163934426229	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	121	5	293	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9994430-9994857	Cluster_1278	Pocillopora_meandrina_HIv1___Sc0000003	9994430	9994857	428	93	26	0.9139784946236559	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	52	0	88	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10001373-10002717	Cluster_1279	Pocillopora_meandrina_HIv1___Sc0000003	10001373	10002717	1345	38614	2233	0.0007251256021132232	-	UGAGCGUACGGUUUAAUGUGUUGAUGACGU	4364	141	38102	45	116	97	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10010816-10011898	Cluster_1280	Pocillopora_meandrina_HIv1___Sc0000003	10010816	10011898	1083	8735	751	0.0004579278763594734	-	UGUAUCGAUGUAAUCUCUCCAGUUUGUGUU	1575	65	8596	6	9	13	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10012444-10012874	Cluster_1281	Pocillopora_meandrina_HIv1___Sc0000003	10012444	10012874	431	286	91	0.0	-	UUUAUCGUCAUUUGUGCUGAAAAUGGACA	37	0	283	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10014241-10014654	Cluster_1282	Pocillopora_meandrina_HIv1___Sc0000003	10014241	10014654	414	103	61	0.6893203883495146	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	11	1	91	1	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10064345-10065144	Cluster_1283	Pocillopora_meandrina_HIv1___Sc0000003	10064345	10065144	800	2334	249	0.9443016281062554	+	UCGAAGACUCUAGACGGCGGAAGCCUCUUC	798	33	2227	6	5	21	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10079764-10080571	Cluster_1284	Pocillopora_meandrina_HIv1___Sc0000003	10079764	10080571	808	40096	597	0.9980796089385475	+	UGGAACAACCUUUCGACUGACGAUCUCACC	17387	48	39904	21	56	29	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10095243-10095670	Cluster_1285	Pocillopora_meandrina_HIv1___Sc0000003	10095243	10095670	428	122	57	0.12295081967213115	-	UGAGUGAGAUAAAUGAAAACCUUUGGAGA	13	4	115	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10129512-10129606	Cluster_1286	Pocillopora_meandrina_HIv1___Sc0000003	10129512	10129606	95	11292	233	0.00017711654268508679	-	CGAUGUACUUCAGAGCAAUUUUU	2869	397	119	3756	240	5015	1765	23	Y	spi-mir-temp-23_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000003:10217881-10218294	Cluster_1287	Pocillopora_meandrina_HIv1___Sc0000003	10217881	10218294	414	117	69	0.03418803418803419	-	UGCUCAUAUCUAAUAGAACUACUGCCGUU	21	1	106	0	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10254529-10255388	Cluster_1288	Pocillopora_meandrina_HIv1___Sc0000003	10254529	10255388	860	671	336	0.6482861400894188	.	UCUAACGGAUACAGCUGCUGUACUGCU	25	27	554	9	16	33	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10257231-10258201	Cluster_1289	Pocillopora_meandrina_HIv1___Sc0000003	10257231	10258201	971	3182	655	0.24481458202388434	.	CGUGUACGACGCCUCUGCCCGAGCUUCAGA	904	17	3057	19	19	31	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10258826-10259292	Cluster_1290	Pocillopora_meandrina_HIv1___Sc0000003	10258826	10259292	467	354	163	0.4717514124293785	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	65	7	326	3	3	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10343590-10344134	Cluster_1291	Pocillopora_meandrina_HIv1___Sc0000003	10343590	10344134	545	551	92	0.9981851179673321	+	GCUUUGCAUGGAACAAUG	263	384	141	7	11	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10366033-10366130	Cluster_1292	Pocillopora_meandrina_HIv1___Sc0000003	10366033	10366130	98	858857	595	0.9999708915453911	+	ACCCGUAGAUCCGAACUUGU	302900	453621	35	21036	380606	3365	194	N	Y	spi-mir-temp-1_Stylophora_pistillata_Liew_et_al._2014_Matches_miR-100_family.;apa-mir-100_Exaiptasia_pallida_Baumgarten_et_al._2017_miR-100;_Nve;_Spis;_Adi;eca-nve-F-miR-100_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;mse-nve-F-miR-100_Metridium_senile_Praher_et_al._2021_Transcriptome-level;sca-nve-F-miR-100_Scolanthus_callimorphus_Praher_et_al._2021_Transcriptome-level;epa-nve-F-miR-100_Exaiptasia_pallida_Praher_et_al._2021_NA;spi-nve-F-miR-100_Stylophora_pistillata_Praher_et_al._2021_NA;miR-100_Nematostella_vectensis_Moran_et_al._2014_NA;avi-miR-temp-100_Anemonia_viridis_Urbarova_et_al._2018_NA
Pocillopora_meandrina_HIv1___Sc0000003:10467440-10467869	Cluster_1293	Pocillopora_meandrina_HIv1___Sc0000003	10467440	10467869	430	170	36	0.11176470588235295	-	UUACAACGGGGACUAGCUCCGAUCUCUCUU	23	18	152	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10524991-10525416	Cluster_1294	Pocillopora_meandrina_HIv1___Sc0000003	10524991	10525416	426	93	38	0.053763440860215055	-	UGUGUAGAUAUGUCUUUUGGACAGGA	20	0	92	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10659509-10659936	Cluster_1295	Pocillopora_meandrina_HIv1___Sc0000003	10659509	10659936	428	183	79	0.907103825136612	+	UCAACAUUCUUAAUGUCACAUGGCACUCUUC	24	1	171	0	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10771888-10772321	Cluster_1296	Pocillopora_meandrina_HIv1___Sc0000003	10771888	10772321	434	421	162	0.8527315914489311	+	UAUCACUUCAUAUUCGGAUAUCCAUUGC	40	12	361	4	5	10	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10853900-10854328	Cluster_1297	Pocillopora_meandrina_HIv1___Sc0000003	10853900	10854328	429	301	127	0.3122923588039867	.	AAGUUUUCCAACGACUCGUUUCUCUGCG	63	10	270	4	4	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10898397-10898826	Cluster_1298	Pocillopora_meandrina_HIv1___Sc0000003	10898397	10898826	430	98	25	1.0	+	UGAGAUGGAUUUGAAUGACUGUAAGGUUUAC	24	4	77	2	8	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10984919-10985340	Cluster_1299	Pocillopora_meandrina_HIv1___Sc0000003	10984919	10985340	422	168	95	0.15476190476190477	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	18	2	155	3	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11272564-11273266	Cluster_1300	Pocillopora_meandrina_HIv1___Sc0000003	11272564	11273266	703	462	197	0.9978354978354979	+	UAGGCACUCUUCUGUUUCCAGGUUUGGUA	56	6	437	6	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11273554-11274023	Cluster_1301	Pocillopora_meandrina_HIv1___Sc0000003	11273554	11274023	470	448	154	1.0	+	UGCGACUCCGAGCACUUUCUGCACAAGUU	63	3	432	0	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11275061-11275491	Cluster_1302	Pocillopora_meandrina_HIv1___Sc0000003	11275061	11275491	431	2706	192	1.0	+	UCGUAGACUUCCGUCCUUAUUGUUUGGUA	1160	1	2656	2	13	8	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11276324-11276792	Cluster_1303	Pocillopora_meandrina_HIv1___Sc0000003	11276324	11276792	469	452	110	1.0	+	UGUACAUUGAAGCGCAGUUGUUUGUAGAACA	74	5	440	3	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11282947-11283364	Cluster_1304	Pocillopora_meandrina_HIv1___Sc0000003	11282947	11283364	418	172	20	1.0	+	AUCCCACUCCUGACACCG	110	164	7	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11284624-11285051	Cluster_1305	Pocillopora_meandrina_HIv1___Sc0000003	11284624	11285051	428	109	46	1.0	+	UUGGUAGACACUGCACAGUGGAUCUGGC	38	3	101	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11286345-11286753	Cluster_1306	Pocillopora_meandrina_HIv1___Sc0000003	11286345	11286753	409	214	98	1.0	+	UGAUCCCUCUGAAUUUCUGGAAGAUGUUUG	14	1	206	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11288132-11288615	Cluster_1307	Pocillopora_meandrina_HIv1___Sc0000003	11288132	11288615	484	561	185	1.0	+	UAAACAUCUUCUGUCUGAUAGCAAACGGC	62	4	554	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11289719-11290158	Cluster_1308	Pocillopora_meandrina_HIv1___Sc0000003	11289719	11290158	440	223	37	0.4080717488789238	.	UACCGUAGAACUUUCCAGAACAUUUCAUU	101	0	217	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11295745-11296301	Cluster_1309	Pocillopora_meandrina_HIv1___Sc0000003	11295745	11296301	557	2379	425	0.9663724253888188	+	UAAUGAAGUCGUAAUUUGUCCAUCC	747	16	2224	5	75	26	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11296950-11298687	Cluster_1310	Pocillopora_meandrina_HIv1___Sc0000003	11296950	11298687	1738	3808	1303	0.9477415966386554	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	92	21	3593	6	36	72	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11304922-11305470	Cluster_1311	Pocillopora_meandrina_HIv1___Sc0000003	11304922	11305470	549	5811	463	0.951815522285321	+	UGAAAUCUUCUUGCUCUUUGUAAUCUGA	2854	27	5590	37	26	74	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11310298-11312559	Cluster_1312	Pocillopora_meandrina_HIv1___Sc0000003	11310298	11312559	2262	7005	2181	0.9049250535331905	+	UAUGUACGAUUUUAACUGGAAGAAACGUU	197	172	6482	27	46	108	170	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11313832-11314259	Cluster_1313	Pocillopora_meandrina_HIv1___Sc0000003	11313832	11314259	428	102	30	0.9411764705882353	+	UGAAAUUCCGAAUAAGUUCUCCAAAACC	34	6	94	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11321069-11322166	Cluster_1314	Pocillopora_meandrina_HIv1___Sc0000003	11321069	11322166	1098	5950	729	0.966218487394958	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1544	27	5723	12	42	76	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11335082-11335508	Cluster_1315	Pocillopora_meandrina_HIv1___Sc0000003	11335082	11335508	427	251	128	0.8167330677290837	+	UGAUUCAUCAGUAUUAAUGACUGUAGU	52	10	211	1	4	2	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11335681-11336086	Cluster_1316	Pocillopora_meandrina_HIv1___Sc0000003	11335681	11336086	406	299	195	0.6555183946488294	.	UGACUAAACUGUGCUCGUGGAAUGUAUA	13	4	255	5	7	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11337086-11337595	Cluster_1317	Pocillopora_meandrina_HIv1___Sc0000003	11337086	11337595	510	442	200	0.6312217194570136	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	69	3	399	4	3	12	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11345275-11345703	Cluster_1318	Pocillopora_meandrina_HIv1___Sc0000003	11345275	11345703	429	238	51	1.0	+	UACUAAGGAUCUUGAUCUCUUGUUUGAAG	85	0	234	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11346784-11347354	Cluster_1319	Pocillopora_meandrina_HIv1___Sc0000003	11346784	11347354	571	2425	174	0.9995876288659794	+	UGAAAGACUCCUACAAAACUCCUUUUUGC	830	12	2379	2	8	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11353870-11354297	Cluster_1320	Pocillopora_meandrina_HIv1___Sc0000003	11353870	11354297	428	210	100	1.0	+	UGAUCAUGUCGUUGCUGAAUUGAGGGCAU	26	1	208	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11358732-11359162	Cluster_1321	Pocillopora_meandrina_HIv1___Sc0000003	11358732	11359162	431	227	74	0.9955947136563876	+	UGACCGACUUCAUAAAGACUGACCAAGAGGA	32	3	216	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11363153-11363582	Cluster_1322	Pocillopora_meandrina_HIv1___Sc0000003	11363153	11363582	430	517	151	0.9709864603481625	+	UAUGAGCAAUAUCCCGAUGAGAAAUUUCG	68	27	449	3	8	19	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11363737-11364796	Cluster_1323	Pocillopora_meandrina_HIv1___Sc0000003	11363737	11364796	1060	15854	1207	0.9986754131449477	+	UAUAGCAGAAAAUGAUGAACCAUAAA	1735	171	15162	80	94	172	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11365010-11366395	Cluster_1324	Pocillopora_meandrina_HIv1___Sc0000003	11365010	11366395	1386	3742	682	0.9957242116515232	+	UGCAGACUUUGCUUAGGGGUUCAACAUC	974	35	3522	8	57	96	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11378928-11380102	Cluster_1325	Pocillopora_meandrina_HIv1___Sc0000003	11378928	11380102	1175	961	389	0.9281997918834547	+	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	150	15	863	6	15	17	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11380313-11380819	Cluster_1326	Pocillopora_meandrina_HIv1___Sc0000003	11380313	11380819	507	671	266	0.9076005961251863	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	48	8	635	4	2	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11380835-11381806	Cluster_1327	Pocillopora_meandrina_HIv1___Sc0000003	11380835	11381806	972	615	302	0.8666666666666667	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	51	9	570	2	2	10	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11381813-11382240	Cluster_1328	Pocillopora_meandrina_HIv1___Sc0000003	11381813	11382240	428	296	159	0.8986486486486487	+	UGAUAACACCAAGUUCUUCGAGACGAGU	28	6	276	1	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11385945-11386361	Cluster_1329	Pocillopora_meandrina_HIv1___Sc0000003	11385945	11386361	417	111	55	0.9369369369369369	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	21	0	101	3	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11386437-11386980	Cluster_1330	Pocillopora_meandrina_HIv1___Sc0000003	11386437	11386980	544	396	173	0.9318181818181818	+	UGUAUCUUCUUAGGCCAGCAUGUGUACUGA	48	6	375	2	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11387132-11387560	Cluster_1331	Pocillopora_meandrina_HIv1___Sc0000003	11387132	11387560	429	213	87	0.9671361502347418	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	47	0	209	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11387865-11388471	Cluster_1332	Pocillopora_meandrina_HIv1___Sc0000003	11387865	11388471	607	1185	371	0.9426160337552743	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	162	13	1113	9	3	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11401883-11402660	Cluster_1333	Pocillopora_meandrina_HIv1___Sc0000003	11401883	11402660	778	428	236	0.9065420560747663	+	UAAGAACAAGCUGCAGAGGAAUACUGUGC	20	14	391	1	2	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11403222-11403650	Cluster_1334	Pocillopora_meandrina_HIv1___Sc0000003	11403222	11403650	429	174	57	0.9827586206896551	+	UGUGUGGAUCUGUAAUGCAUCAUGCCGUC	42	4	169	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11404415-11404953	Cluster_1335	Pocillopora_meandrina_HIv1___Sc0000003	11404415	11404953	539	2033	401	0.602557796360059	.	GUGUAGAUCAGCCGACUUCAACAUGUCA	182	27	1667	11	45	112	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11405600-11406230	Cluster_1336	Pocillopora_meandrina_HIv1___Sc0000003	11405600	11406230	631	513	174	0.9590643274853801	+	UACUGAAUUUCUCGCACGCAAAUUGUGGG	119	3	495	0	1	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11406949-11407876	Cluster_1337	Pocillopora_meandrina_HIv1___Sc0000003	11406949	11407876	928	901	421	0.8867924528301887	+	UGAUGUGACCUUGGAUUUAUUUGCGGC	27	11	826	5	14	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11415939-11417911	Cluster_1338	Pocillopora_meandrina_HIv1___Sc0000003	11415939	11417911	1973	5884	1570	0.938817131203263	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	511	21	5642	16	15	71	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11418446-11418975	Cluster_1339	Pocillopora_meandrina_HIv1___Sc0000003	11418446	11418975	530	328	130	0.9664634146341463	+	UAUUAUACUGCGGGUUACUCAGCCAAGC	18	2	297	2	3	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11419094-11419828	Cluster_1340	Pocillopora_meandrina_HIv1___Sc0000003	11419094	11419828	735	1202	320	0.9351081530782029	+	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	127	10	1141	2	6	20	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11419882-11420309	Cluster_1341	Pocillopora_meandrina_HIv1___Sc0000003	11419882	11420309	428	176	77	0.9715909090909091	+	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	27	3	168	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11420788-11423481	Cluster_1342	Pocillopora_meandrina_HIv1___Sc0000003	11420788	11423481	2694	4506	1532	0.3943630714602752	.	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	155	44	4144	16	12	88	202	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11423483-11424351	Cluster_1343	Pocillopora_meandrina_HIv1___Sc0000003	11423483	11424351	869	1060	527	0.1349056603773585	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	33	12	941	5	16	34	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11424551-11426547	Cluster_1344	Pocillopora_meandrina_HIv1___Sc0000003	11424551	11426547	1997	3472	1191	0.06566820276497695	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	202	31	3214	15	21	76	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11428422-11428852	Cluster_1345	Pocillopora_meandrina_HIv1___Sc0000003	11428422	11428852	431	951	103	0.9831756046267087	+	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	537	4	920	1	2	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11430182-11430731	Cluster_1346	Pocillopora_meandrina_HIv1___Sc0000003	11430182	11430731	550	4303	564	0.4271438531257262	.	ACAAGACAGAAUUCCAGCUGAUACAGA	516	49	3983	8	32	83	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11430802-11431829	Cluster_1347	Pocillopora_meandrina_HIv1___Sc0000003	11430802	11431829	1028	4413	921	0.10174484477679584	-	UCUGCGACUAUGAAAUAAGGCUUCUGC	479	49	4126	18	21	69	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11432031-11432913	Cluster_1348	Pocillopora_meandrina_HIv1___Sc0000003	11432031	11432913	883	4648	753	0.15038726333907057	-	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	649	20	4417	51	12	57	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11433933-11435134	Cluster_1349	Pocillopora_meandrina_HIv1___Sc0000003	11433933	11435134	1202	2784	886	0.17277298850574713	-	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	120	36	2559	13	24	35	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11436259-11436994	Cluster_1350	Pocillopora_meandrina_HIv1___Sc0000003	11436259	11436994	736	3935	579	0.01804320203303685	-	UGGAAAAGGCUUGUUGGAAAUCUUCACG	785	14	3862	5	4	9	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11535301-11535725	Cluster_1351	Pocillopora_meandrina_HIv1___Sc0000003	11535301	11535725	425	95	22	1.0	+	GAGAUUCUCAAGAGGAUUGCACUGGAGA	36	3	89	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11639372-11639858	Cluster_1352	Pocillopora_meandrina_HIv1___Sc0000003	11639372	11639858	487	1358	205	0.5022091310751104	.	UUAACUCCACGGUGCCAAUGACUUUCUU	205	9	1159	13	13	73	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11689765-11690191	Cluster_1353	Pocillopora_meandrina_HIv1___Sc0000003	11689765	11690191	427	131	35	0.9923664122137404	+	UUAUAACCGAGUGUGCCUUAUAACCGA	50	2	127	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11710129-11710557	Cluster_1354	Pocillopora_meandrina_HIv1___Sc0000003	11710129	11710557	429	538	67	0.9702602230483272	+	UAACUUCAACUAGAUCAAAAUGCUCGUGA	321	7	523	3	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11727877-11728296	Cluster_1355	Pocillopora_meandrina_HIv1___Sc0000003	11727877	11728296	420	244	7	0.0	-	CUUGAAGCGGUUGGAUCA	107	244	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11894004-11894429	Cluster_1356	Pocillopora_meandrina_HIv1___Sc0000003	11894004	11894429	426	159	51	0.5283018867924528	.	UCUGACAUCCUUCUUUUAUACUUUGUGC	21	2	103	0	9	15	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12068300-12068733	Cluster_1357	Pocillopora_meandrina_HIv1___Sc0000003	12068300	12068733	434	351	119	0.9259259259259259	+	UAGACAAGAUCUUCAGUAAAAACCAAUUCU	39	30	305	7	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12280391-12280819	Cluster_1358	Pocillopora_meandrina_HIv1___Sc0000003	12280391	12280819	429	405	57	0.9925925925925926	+	GCUUGAUGUACGCGAAAGAAAUUGGAUG	79	7	387	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12328371-12328793	Cluster_1359	Pocillopora_meandrina_HIv1___Sc0000003	12328371	12328793	423	80	36	0.95	+	UCCAAACUAGAACACAUAAUUUUCCCCCU	16	4	74	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12328990-12329392	Cluster_1360	Pocillopora_meandrina_HIv1___Sc0000003	12328990	12329392	403	92	49	1.0	+	AACAGGUCGAAGGGUAGAGACA	21	19	25	8	28	11	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12332383-12332813	Cluster_1361	Pocillopora_meandrina_HIv1___Sc0000003	12332383	12332813	431	365	29	0.9232876712328767	+	GCAUUACCUGAUCUUUUGUACCUUAGGCU	135	1	363	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12356919-12357347	Cluster_1362	Pocillopora_meandrina_HIv1___Sc0000003	12356919	12357347	429	253	97	0.18972332015810275	-	GUUCUUAUCAGCAGGAAUACCUCUGUCCA	46	8	219	0	0	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12463515-12464186	Cluster_1363	Pocillopora_meandrina_HIv1___Sc0000003	12463515	12464186	672	994	218	0.7585513078470825	.	CUUCCAAUCAAAGUGCGUUGUGAUCGUGU	49	189	770	14	6	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12466781-12467412	Cluster_1364	Pocillopora_meandrina_HIv1___Sc0000003	12466781	12467412	632	344	78	0.9709302325581395	+	UUUCAAACUAAGGAAGGAGAAAGGGAUA	113	0	270	3	3	5	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12564107-12564536	Cluster_1365	Pocillopora_meandrina_HIv1___Sc0000003	12564107	12564536	430	289	120	0.0	-	UCUCAGUGACUUGAGUUCUUCUUGUACGGA	23	1	282	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12565210-12565746	Cluster_1366	Pocillopora_meandrina_HIv1___Sc0000003	12565210	12565746	537	371	149	0.005390835579514825	-	UGUGUAACUGCUGCUGGCGUCGAAGCCAUA	23	2	357	5	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12586001-12586513	Cluster_1367	Pocillopora_meandrina_HIv1___Sc0000003	12586001	12586513	513	402	149	0.4427860696517413	.	UGCAUUGUAAUCGGGAUAGACCUAUUGA	55	12	370	7	3	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12599695-12600122	Cluster_1368	Pocillopora_meandrina_HIv1___Sc0000003	12599695	12600122	428	228	76	0.05701754385964912	-	UGCAUUGUAAUCGGGAUAGACCUAUUGA	54	6	209	6	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12639739-12640148	Cluster_1369	Pocillopora_meandrina_HIv1___Sc0000003	12639739	12640148	410	91	50	0.6043956043956044	.	AGAUACAAAAUGGUCAAGGUUCUUGUUG	10	3	77	4	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12711306-12711720	Cluster_1370	Pocillopora_meandrina_HIv1___Sc0000003	12711306	12711720	415	108	12	0.0	-	AGUGUGCUCUUAACA	97	103	1	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12928765-12930446	Cluster_1371	Pocillopora_meandrina_HIv1___Sc0000003	12928765	12930446	1682	2028	805	0.17357001972386588	-	UCUAACGCGUUUGUCUGACAUCCCUUU	143	51	1800	24	43	26	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12931370-12932839	Cluster_1372	Pocillopora_meandrina_HIv1___Sc0000003	12931370	12932839	1470	16834	2204	0.9019246762504455	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3084	245	14998	193	80	198	1120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13055954-13056371	Cluster_1373	Pocillopora_meandrina_HIv1___Sc0000003	13055954	13056371	418	150	58	0.006666666666666667	-	GAGAGAGCUCAGAUGUGU	53	100	22	10	5	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13171766-13172167	Cluster_1374	Pocillopora_meandrina_HIv1___Sc0000003	13171766	13172167	402	138	76	0.9637681159420289	+	UUGGCAUGUUCAACUUGGGAAGAGCACC	21	0	130	2	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13330462-13330932	Cluster_1375	Pocillopora_meandrina_HIv1___Sc0000003	13330462	13330932	471	213	89	0.892018779342723	+	UGCGAUUUGCUGGAGAAACUUCGUCGUU	14	14	186	1	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13331910-13332520	Cluster_1376	Pocillopora_meandrina_HIv1___Sc0000003	13331910	13332520	611	2864	399	0.026885474860335195	-	UGUAAUCCACAUGAUCAGUCCAAGACAGAUU	395	12	2767	2	7	6	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13340424-13340841	Cluster_1377	Pocillopora_meandrina_HIv1___Sc0000003	13340424	13340841	418	79	37	1.0	+	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	18	2	74	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13396302-13397594	Cluster_1378	Pocillopora_meandrina_HIv1___Sc0000003	13396302	13397594	1293	2809	1021	0.20042719829120684	.	UAGAAGGAUUUGAAAAUGUCAGGCAUGU	181	36	2601	12	17	28	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13398147-13398574	Cluster_1379	Pocillopora_meandrina_HIv1___Sc0000003	13398147	13398574	428	178	101	0.8707865168539326	+	UACUUGACUCUAGGAUACACAAGUUCUGG	26	1	166	2	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13398708-13399926	Cluster_1380	Pocillopora_meandrina_HIv1___Sc0000003	13398708	13399926	1219	3085	1018	0.6820097244732577	.	AGGUGUAGAAUGUAAAAAGCAGCU	142	29	2629	17	29	79	302	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13511110-13511534	Cluster_1381	Pocillopora_meandrina_HIv1___Sc0000003	13511110	13511534	425	112	45	0.9464285714285714	+	UUUCUUCAGAUUCGAAAAGCUUUCUUC	36	1	104	2	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13577334-13578578	Cluster_1382	Pocillopora_meandrina_HIv1___Sc0000003	13577334	13578578	1245	1500	543	0.8366666666666667	+	GGGUUAAACAUGAAUGAUUGUCGUG	44	48	1373	4	7	11	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13610033-13610462	Cluster_1383	Pocillopora_meandrina_HIv1___Sc0000003	13610033	13610462	430	152	39	0.881578947368421	+	AUCUAAACGAACUUGUUUUUCUUAUGAACA	51	6	141	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13659589-13660015	Cluster_1384	Pocillopora_meandrina_HIv1___Sc0000003	13659589	13660015	427	177	74	0.9378531073446328	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	35	3	163	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13680833-13681239	Cluster_1385	Pocillopora_meandrina_HIv1___Sc0000003	13680833	13681239	407	206	148	0.3786407766990291	.	UGCGGACCUUUGUGAGAACAG	9	121	10	51	13	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13841494-13841922	Cluster_1386	Pocillopora_meandrina_HIv1___Sc0000003	13841494	13841922	429	84	12	0.023809523809523808	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	0	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13864481-13864907	Cluster_1387	Pocillopora_meandrina_HIv1___Sc0000003	13864481	13864907	427	128	51	0.8359375	+	UAGGAUAUAUCACUUGCGUAAUUUACA	31	2	122	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13891543-13891952	Cluster_1388	Pocillopora_meandrina_HIv1___Sc0000003	13891543	13891952	410	132	60	0.5681818181818182	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	24	3	120	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13907614-13908040	Cluster_1389	Pocillopora_meandrina_HIv1___Sc0000003	13907614	13908040	427	191	55	0.06282722513089005	-	UCGUUUAGAUCAGAGAUCACCUCAACU	44	4	183	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13952701-13954249	Cluster_1390	Pocillopora_meandrina_HIv1___Sc0000003	13952701	13954249	1549	1407	573	0.9744136460554371	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	109	17	1348	2	2	20	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13954453-13955203	Cluster_1391	Pocillopora_meandrina_HIv1___Sc0000003	13954453	13955203	751	625	255	0.9184	+	UGUUAAAAUUAAAAUCUGCCAGUUCUGC	135	11	556	7	4	13	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13955885-13956923	Cluster_1392	Pocillopora_meandrina_HIv1___Sc0000003	13955885	13956923	1039	814	335	0.9643734643734644	+	UAACAUCUCUCUUUCCGACUUUAACAGC	46	13	779	4	2	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13957064-13958057	Cluster_1393	Pocillopora_meandrina_HIv1___Sc0000003	13957064	13958057	994	1178	468	0.9278438030560272	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	93	19	1086	8	3	14	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13958176-13958668	Cluster_1394	Pocillopora_meandrina_HIv1___Sc0000003	13958176	13958668	493	496	288	0.7923387096774194	.	UGAAUUUCGAUCUGCAGACUCUCGGUA	16	2	434	3	7	13	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13966898-13967322	Cluster_1395	Pocillopora_meandrina_HIv1___Sc0000003	13966898	13967322	425	102	35	0.0392156862745098	-	UGUGUCGAGAAGAUGUUGCUCUCUAGGGC	39	0	91	0	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13990007-13990434	Cluster_1396	Pocillopora_meandrina_HIv1___Sc0000003	13990007	13990434	428	94	25	0.9893617021276596	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	41	3	88	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14079938-14081562	Cluster_1397	Pocillopora_meandrina_HIv1___Sc0000003	14079938	14081562	1625	2070	876	0.05652173913043478	-	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	100	23	1929	14	15	27	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14081697-14082741	Cluster_1398	Pocillopora_meandrina_HIv1___Sc0000003	14081697	14082741	1045	898	381	0.042316258351893093	-	UAACAUCUCUCUUUCCGACUUUAACAGC	64	3	861	4	7	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14083663-14084097	Cluster_1399	Pocillopora_meandrina_HIv1___Sc0000003	14083663	14084097	435	622	264	0.08520900321543408	-	UGAUGGAUCACUGCUUGACUUGUUGCA	55	16	529	7	5	17	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14084106-14084797	Cluster_1400	Pocillopora_meandrina_HIv1___Sc0000003	14084106	14084797	692	578	307	0.10034602076124567	-	UGGGAAUCCGAAUCGUGGUACAAAGUCA	22	32	495	19	10	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14084832-14085920	Cluster_1401	Pocillopora_meandrina_HIv1___Sc0000003	14084832	14085920	1089	3719	755	0.007797795106211347	-	UUAACGCGUGAACUGCUGAAUACUGGC	300	15	3600	10	19	41	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14165185-14165662	Cluster_1402	Pocillopora_meandrina_HIv1___Sc0000003	14165185	14165662	478	322	102	0.0	-	UCGUUCAUUUACAAGAUUUGCCGCUUCGC	64	1	317	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14220817-14221247	Cluster_1403	Pocillopora_meandrina_HIv1___Sc0000003	14220817	14221247	431	264	46	0.9848484848484849	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	75	2	257	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14221275-14221702	Cluster_1404	Pocillopora_meandrina_HIv1___Sc0000003	14221275	14221702	428	292	80	0.9863013698630136	+	UUGGAACGUGUUGCUGAACGCUUGUUGC	65	5	273	2	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14274954-14275375	Cluster_1405	Pocillopora_meandrina_HIv1___Sc0000003	14274954	14275375	422	399	133	0.23809523809523808	.	UUCGCGUCUGAAGCUGUUAG	114	215	37	46	55	42	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14363055-14363483	Cluster_1406	Pocillopora_meandrina_HIv1___Sc0000003	14363055	14363483	429	421	34	0.997624703087886	+	UGAAAGACUCCAAUAAAACUCCUCUUU	165	23	357	5	8	21	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14394454-14394954	Cluster_1407	Pocillopora_meandrina_HIv1___Sc0000003	14394454	14394954	501	200	67	0.13	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	23	1	195	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14400478-14400896	Cluster_1408	Pocillopora_meandrina_HIv1___Sc0000003	14400478	14400896	419	87	38	0.06896551724137931	-	UCUGUAAACUCCGUAUUUAACAACAAAU	13	1	85	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14417208-14417849	Cluster_1409	Pocillopora_meandrina_HIv1___Sc0000003	14417208	14417849	642	1034	128	0.995164410058027	+	UUGGAACGUGUUGCUGAACGCUUGUUA	300	8	998	3	2	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14422810-14424044	Cluster_1410	Pocillopora_meandrina_HIv1___Sc0000003	14422810	14424044	1235	2174	387	0.9793008279668813	+	UAAGCAAUCAACUCCAACAAACUCGUC	552	27	2066	51	7	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14456836-14457261	Cluster_1411	Pocillopora_meandrina_HIv1___Sc0000003	14456836	14457261	426	400	65	0.9625	+	UAAGACAUUGGCAUACUUGGCAUACA	251	2	376	4	2	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14530563-14530993	Cluster_1412	Pocillopora_meandrina_HIv1___Sc0000003	14530563	14530993	431	265	75	0.9924528301886792	+	UGUAUCUUCGCGUGUCUCUGUGGAUGACU	27	0	263	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14540688-14541196	Cluster_1413	Pocillopora_meandrina_HIv1___Sc0000003	14540688	14541196	509	768	192	0.014322916666666666	-	UUGGAACGUGUUGCUGAACGCUUGUUGUA	158	12	725	2	13	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14577884-14578311	Cluster_1414	Pocillopora_meandrina_HIv1___Sc0000003	14577884	14578311	428	102	28	0.0	-	UUGGUUCUACGGCAUGAGUGAUGACUGU	33	0	101	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14586087-14586515	Cluster_1415	Pocillopora_meandrina_HIv1___Sc0000003	14586087	14586515	429	233	98	0.9012875536480687	+	UGUUAAAUUGGUAGCUGUACAUUUCGAAGC	35	0	217	0	2	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14666900-14667360	Cluster_1416	Pocillopora_meandrina_HIv1___Sc0000003	14666900	14667360	461	399	169	0.8721804511278195	+	UGUUUUCUUUGAUCCGCAGACGUGACAC	39	1	367	5	3	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14667551-14668885	Cluster_1417	Pocillopora_meandrina_HIv1___Sc0000003	14667551	14668885	1335	1497	476	0.5798263193052772	.	GGGUUUCGUAUCUUGGACAUGUGGUCACA	154	12	1211	11	46	143	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14670104-14670513	Cluster_1418	Pocillopora_meandrina_HIv1___Sc0000003	14670104	14670513	410	169	103	0.5502958579881657	.	UGAAUUUGCUGAACUAAUUCCUGGAGAGC	6	5	135	5	1	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14733119-14733547	Cluster_1419	Pocillopora_meandrina_HIv1___Sc0000003	14733119	14733547	429	633	61	0.9921011058451816	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	308	3	620	4	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14745273-14746976	Cluster_1420	Pocillopora_meandrina_HIv1___Sc0000003	14745273	14746976	1704	4095	983	0.10573870573870574	-	UUCUUAACGUAGCGCUCUCUGACUUUCC	265	26	3912	20	6	53	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14748358-14748780	Cluster_1421	Pocillopora_meandrina_HIv1___Sc0000003	14748358	14748780	423	392	54	0.0	-	AAAGAAGUACAAGUGGUAGGGUC	230	11	42	24	80	232	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14754051-14754691	Cluster_1422	Pocillopora_meandrina_HIv1___Sc0000003	14754051	14754691	641	299	136	0.705685618729097	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	41	4	247	1	5	17	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14755390-14755814	Cluster_1423	Pocillopora_meandrina_HIv1___Sc0000003	14755390	14755814	425	161	80	0.9316770186335404	+	UAUUUUCAAACUGCGACGAUUGCUUCUGA	24	1	154	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14760290-14760716	Cluster_1424	Pocillopora_meandrina_HIv1___Sc0000003	14760290	14760716	427	230	126	0.02608695652173913	-	UUGGAGUGUUGUUUGACGCUA	14	3	209	14	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14763327-14763755	Cluster_1425	Pocillopora_meandrina_HIv1___Sc0000003	14763327	14763755	429	273	45	0.9010989010989011	+	AAGGAAUUCAUGACACACAGCAUCAGACG	54	2	225	5	0	4	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14764345-14764773	Cluster_1426	Pocillopora_meandrina_HIv1___Sc0000003	14764345	14764773	429	142	26	0.035211267605633804	-	UAUGAUCAAAUACUGGAUUUCCAUCAUGC	106	0	138	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14791887-14792308	Cluster_1427	Pocillopora_meandrina_HIv1___Sc0000003	14791887	14792308	422	147	68	0.04081632653061224	-	UGAUUUCGCGUGCUCAACUCCGAUAAG	26	3	135	1	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14792339-14793038	Cluster_1428	Pocillopora_meandrina_HIv1___Sc0000003	14792339	14793038	700	915	344	0.3092896174863388	.	UGUUUUCUUUGUGUUCAACGUUGCUCGAUC	90	8	850	6	6	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14869035-14869462	Cluster_1429	Pocillopora_meandrina_HIv1___Sc0000003	14869035	14869462	428	226	20	1.0	+	UGUUGUGGUUUAGGCAUUCUGUAUCUCA	71	1	221	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14949573-14950173	Cluster_1430	Pocillopora_meandrina_HIv1___Sc0000003	14949573	14950173	601	1607	191	0.9651524579962664	+	GAUUGGAACAGUCAUCAGACGGGUGGACA	489	2	1527	11	25	22	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14950325-14950752	Cluster_1431	Pocillopora_meandrina_HIv1___Sc0000003	14950325	14950752	428	149	58	0.0738255033557047	-	UAUAACGGUUAAUGUUGACGUCUAAACG	33	3	134	0	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15161498-15161915	Cluster_1432	Pocillopora_meandrina_HIv1___Sc0000003	15161498	15161915	418	155	55	0.06451612903225806	-	UGGUGUCGACUUCCUGUGCAGUUAAAAC	36	0	143	0	1	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15161969-15162397	Cluster_1433	Pocillopora_meandrina_HIv1___Sc0000003	15161969	15162397	429	222	108	0.11711711711711711	-	UGUUUUGAUCUUAGCGUACUCGUUUGUU	26	1	203	3	1	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15162904-15163330	Cluster_1434	Pocillopora_meandrina_HIv1___Sc0000003	15162904	15163330	427	173	92	0.04046242774566474	-	UGAAUUUCGUCCUUUUCUUUGUCCCAGG	32	0	166	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15172910-15173338	Cluster_1435	Pocillopora_meandrina_HIv1___Sc0000003	15172910	15173338	429	1377	57	1.0	+	UAACUUCAACUAGAUCGAAAUGCUUGUGA	1008	0	1377	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15177574-15178003	Cluster_1436	Pocillopora_meandrina_HIv1___Sc0000003	15177574	15178003	430	407	144	0.995085995085995	+	CAAGUGCUGCUUCUGCUACCUGGACAGAUU	47	3	395	2	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15183103-15183550	Cluster_1437	Pocillopora_meandrina_HIv1___Sc0000003	15183103	15183550	448	1416	175	0.9293785310734464	+	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	599	5	1369	11	6	17	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15184557-15184986	Cluster_1438	Pocillopora_meandrina_HIv1___Sc0000003	15184557	15184986	430	165	54	0.030303030303030304	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	25	0	162	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15261067-15261502	Cluster_1439	Pocillopora_meandrina_HIv1___Sc0000003	15261067	15261502	436	190	59	0.2631578947368421	.	UGUUAAAUUACGAUGCUUCUAACAGUUCUGA	25	4	121	1	1	25	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15349508-15349937	Cluster_1440	Pocillopora_meandrina_HIv1___Sc0000003	15349508	15349937	430	1204	118	0.9966777408637874	+	GAUUGGAACAGUCAUCAGACGGGUGGACA	410	4	1160	6	16	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15354686-15355112	Cluster_1441	Pocillopora_meandrina_HIv1___Sc0000003	15354686	15355112	427	158	16	1.0	+	UGUUGUGGUUUAGGCAUUCUGUAUCUCC	49	0	150	2	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15371508-15371934	Cluster_1442	Pocillopora_meandrina_HIv1___Sc0000003	15371508	15371934	427	242	138	0.871900826446281	+	UGAGUCGAGGUUAUUCACAAUACGAGC	39	6	219	0	1	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15391885-15392481	Cluster_1443	Pocillopora_meandrina_HIv1___Sc0000003	15391885	15392481	597	5830	479	0.9974271012006861	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	869	12	5762	1	7	10	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15400240-15400668	Cluster_1444	Pocillopora_meandrina_HIv1___Sc0000003	15400240	15400668	429	656	73	0.9954268292682927	+	UAUGAUUGCUUGAAAUUGUUAGACCA	411	5	650	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15406618-15407044	Cluster_1445	Pocillopora_meandrina_HIv1___Sc0000003	15406618	15407044	427	101	39	1.0	+	UACGAUGAACUCUUCUGCUAUUGUGGAGA	33	1	97	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15410924-15411859	Cluster_1446	Pocillopora_meandrina_HIv1___Sc0000003	15410924	15411859	936	930	312	0.9204301075268817	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	66	5	885	4	7	8	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15411937-15412345	Cluster_1447	Pocillopora_meandrina_HIv1___Sc0000003	15411937	15412345	409	180	108	0.6111111111111112	.	ACUGGAUACAAAACUGCUCGAUGC	26	3	125	0	3	10	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15414332-15414760	Cluster_1448	Pocillopora_meandrina_HIv1___Sc0000003	15414332	15414760	429	153	68	1.0	+	UGUUAUUUGUUCUGGCGAUCUUUCAUCGA	30	3	148	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15416696-15417125	Cluster_1449	Pocillopora_meandrina_HIv1___Sc0000003	15416696	15417125	430	1176	104	1.0	+	UUGGAUCCCGUAACUCUGGAAAGCUCAG	332	9	1159	3	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15417614-15418454	Cluster_1450	Pocillopora_meandrina_HIv1___Sc0000003	15417614	15418454	841	562	201	0.9626334519572953	+	UGUAAGUCUACAGUAGAUUUGGAGGUG	47	8	525	4	2	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15421409-15421836	Cluster_1451	Pocillopora_meandrina_HIv1___Sc0000003	15421409	15421836	428	170	79	1.0	+	UGAUUGGAUGACGUCUUCACUGACUUUGUG	10	4	163	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15431985-15432412	Cluster_1452	Pocillopora_meandrina_HIv1___Sc0000003	15431985	15432412	428	116	20	1.0	+	UGAAAUCUACAAACUUGAAAUACUCAGC	44	0	116	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15450947-15451676	Cluster_1453	Pocillopora_meandrina_HIv1___Sc0000003	15450947	15451676	730	4150	485	0.9930120481927711	+	UAAGACAUUGGUAUACUUCGCAUGCAAGG	520	19	3987	8	25	89	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15452051-15452743	Cluster_1454	Pocillopora_meandrina_HIv1___Sc0000003	15452051	15452743	693	1074	236	0.9962756052141527	+	UUGACUCAACCACUUAACAAGAGCUAGACA	356	2	1048	3	7	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15453438-15454306	Cluster_1455	Pocillopora_meandrina_HIv1___Sc0000003	15453438	15454306	869	5252	525	0.9390708301599391	+	UAUGAUCUGGAUAUAUUGUACAUUUUC	874	16	4904	38	32	55	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15455863-15456299	Cluster_1456	Pocillopora_meandrina_HIv1___Sc0000003	15455863	15456299	437	3647	250	0.9846449136276392	+	UACUGCUCUUCAGUUUCUGUGUUUUCAGGC	1348	3	3610	2	1	5	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15471288-15471708	Cluster_1457	Pocillopora_meandrina_HIv1___Sc0000003	15471288	15471708	421	158	72	0.689873417721519	.	UCUACUGUCUGCUCUAUCGUAAAUGAAG	15	2	152	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15473030-15473439	Cluster_1458	Pocillopora_meandrina_HIv1___Sc0000003	15473030	15473439	410	170	80	0.611764705882353	.	UGCUGAAUCCAGUCUCUUUUUAGACAACU	11	3	151	1	3	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15477016-15477447	Cluster_1459	Pocillopora_meandrina_HIv1___Sc0000003	15477016	15477447	432	698	139	0.9742120343839542	+	UGUAAUCUCAAUGCUGGUGCUCUGGCAC	133	0	667	0	0	18	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15478461-15479040	Cluster_1460	Pocillopora_meandrina_HIv1___Sc0000003	15478461	15479040	580	5040	258	0.06468253968253969	-	CUGGAUUUCAAAAAGAACCUAA	3461	39	1009	115	3845	3	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15480587-15481499	Cluster_1461	Pocillopora_meandrina_HIv1___Sc0000003	15480587	15481499	913	786	331	0.5127226463104325	.	UCGGUGCCACAACUGACUGAAAUUUAAUUC	37	9	670	6	6	18	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15487197-15487656	Cluster_1462	Pocillopora_meandrina_HIv1___Sc0000003	15487197	15487656	460	930	235	0.24623655913978496	.	UGUGAGCGAAAACGACCGUGAAACGAACG	64	5	740	33	19	80	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15495968-15496395	Cluster_1463	Pocillopora_meandrina_HIv1___Sc0000003	15495968	15496395	428	106	27	0.02830188679245283	-	UUGACGUUCGCUCCAGAAAGCGUUGGAGA	57	6	90	8	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15497524-15498143	Cluster_1464	Pocillopora_meandrina_HIv1___Sc0000003	15497524	15498143	620	313	121	0.9680511182108626	+	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	58	2	305	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15939760-15940604	Cluster_1465	Pocillopora_meandrina_HIv1___Sc0000003	15939760	15940604	845	99108	1522	0.9999293699802236	+	GAGACUUGAAGCGGUUGGA	14425	78219	1369	9560	4915	2994	2051	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15940749-15941463	Cluster_1466	Pocillopora_meandrina_HIv1___Sc0000003	15940749	15941463	715	35497	319	0.9998591430261712	+	CACUUUCUGGAGUUAAGGCC	15608	22199	151	9730	3194	205	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16071252-16072364	Cluster_1467	Pocillopora_meandrina_HIv1___Sc0000003	16071252	16072364	1113	30257	1499	0.9999338995934824	+	GUGGACUGCUUGCAGUGCUCCG	3194	11678	7041	1960	6096	2129	1353	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16161170-16161598	Cluster_1468	Pocillopora_meandrina_HIv1___Sc0000003	16161170	16161598	429	143	42	0.972027972027972	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	44	1	140	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16162242-16162671	Cluster_1469	Pocillopora_meandrina_HIv1___Sc0000003	16162242	16162671	430	207	67	0.9323671497584541	+	AAUGGGAAAACGAGAACAGCGUGAGUGUU	30	0	189	1	0	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16173664-16174217	Cluster_1470	Pocillopora_meandrina_HIv1___Sc0000003	16173664	16174217	554	84384	2989	0.9992178612059158	+	UGAGAUUAAGCCUUUGUUCUAAGAUUUGU	20056	18796	51159	4510	2184	3615	4120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16338462-16338888	Cluster_1471	Pocillopora_meandrina_HIv1___Sc0000003	16338462	16338888	427	204	118	0.12745098039215685	-	UAUUCCAAGAUUGGCCGUACCAGAGACA	17	5	189	3	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16356576-16357005	Cluster_1472	Pocillopora_meandrina_HIv1___Sc0000003	16356576	16357005	430	232	123	0.7456896551724138	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	11	2	209	0	3	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16358523-16359354	Cluster_1473	Pocillopora_meandrina_HIv1___Sc0000003	16358523	16359354	832	576	223	0.041666666666666664	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	49	3	560	1	1	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16387247-16387674	Cluster_1474	Pocillopora_meandrina_HIv1___Sc0000003	16387247	16387674	428	188	85	0.8882978723404256	+	UGCUUCUUGAACUGGAUAGCGCUGAUGGU	16	21	160	3	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16620171-16620588	Cluster_1475	Pocillopora_meandrina_HIv1___Sc0000003	16620171	16620588	418	288	174	0.017361111111111112	-	UGUUCAGGGCGUCUAUCUCUUUGCGGUU	9	4	275	3	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16784530-16784940	Cluster_1476	Pocillopora_meandrina_HIv1___Sc0000003	16784530	16784940	411	116	52	1.0	+	AGACCCAUGGCAGACUUUUUG	41	17	31	47	14	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16794495-16794928	Cluster_1477	Pocillopora_meandrina_HIv1___Sc0000003	16794495	16794928	434	253	74	0.20948616600790515	.	UUCAUGACUUCCAAACAUUUCUUUGUCGA	49	1	251	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16918402-16918829	Cluster_1478	Pocillopora_meandrina_HIv1___Sc0000003	16918402	16918829	428	260	135	0.8384615384615385	+	UAAUUAGACUUGGAUGCGUGAUGCGAUA	18	5	239	4	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16943988-16944596	Cluster_1479	Pocillopora_meandrina_HIv1___Sc0000003	16943988	16944596	609	403	95	0.009925558312655087	-	UACCAUAGAACUUUCAAGAACAUUUCAUC	144	6	373	4	5	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17032395-17032822	Cluster_1480	Pocillopora_meandrina_HIv1___Sc0000003	17032395	17032822	428	203	26	0.18719211822660098	-	UUUCCAGGUUGUCUGAUAAUUGUUGGGC	56	0	200	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17111097-17111524	Cluster_1481	Pocillopora_meandrina_HIv1___Sc0000003	17111097	17111524	428	179	55	0.01675977653631285	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	41	2	174	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17261320-17261748	Cluster_1482	Pocillopora_meandrina_HIv1___Sc0000003	17261320	17261748	429	85	18	0.0	-	UUGCAAUUGAAGACGAUCUCGGGCGCCCA	53	1	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17413456-17414292	Cluster_1483	Pocillopora_meandrina_HIv1___Sc0000003	17413456	17414292	837	1030	296	0.6864077669902913	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	199	3	1000	8	0	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17434777-17435282	Cluster_1484	Pocillopora_meandrina_HIv1___Sc0000003	17434777	17435282	506	22285	99	0.006013013237603769	-	UACCAAGGUCUUGUAGUCUAGUACAACU	13070	13	22191	3	17	18	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17468772-17469200	Cluster_1485	Pocillopora_meandrina_HIv1___Sc0000003	17468772	17469200	429	97	25	0.21649484536082475	.	CUUCAUUCUGAUCUAUUGUUACAGUUACAAC	38	0	92	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17494736-17495146	Cluster_1486	Pocillopora_meandrina_HIv1___Sc0000003	17494736	17495146	411	102	69	0.3627450980392157	.	UAAAGUCAACUGCUCUCGAUCGAAU	6	6	85	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17512565-17513156	Cluster_1487	Pocillopora_meandrina_HIv1___Sc0000003	17512565	17513156	592	3141	399	0.9703915950334289	+	AAGGAGUUGAAAAGAACAAUGAUGUAGC	401	22	3012	5	15	33	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17513340-17513807	Cluster_1488	Pocillopora_meandrina_HIv1___Sc0000003	17513340	17513807	468	4850	442	0.30577319587628865	.	AAGAAGAUCAGAGAAUGUUAAUUGAGA	547	25	3958	19	248	114	486	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17514075-17514791	Cluster_1489	Pocillopora_meandrina_HIv1___Sc0000003	17514075	17514791	717	736	144	0.46875	.	UUCCAUUUCACCAAAUAUUGAACCUGAAGA	148	4	646	18	14	35	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17530878-17531307	Cluster_1490	Pocillopora_meandrina_HIv1___Sc0000003	17530878	17531307	430	418	38	0.9952153110047847	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	163	0	417	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17533552-17533978	Cluster_1491	Pocillopora_meandrina_HIv1___Sc0000003	17533552	17533978	427	169	57	0.005917159763313609	-	CAAAAACGCAUUUUCCUGCAAUCUGGA	34	4	131	0	3	29	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17622970-17623392	Cluster_1492	Pocillopora_meandrina_HIv1___Sc0000003	17622970	17623392	423	104	13	1.0	+	GAGGACUUUGUAGCAACCUUGAC	41	15	34	1	0	41	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17651813-17652242	Cluster_1493	Pocillopora_meandrina_HIv1___Sc0000003	17651813	17652242	430	439	37	0.9977220956719818	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	175	0	439	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17729370-17729790	Cluster_1494	Pocillopora_meandrina_HIv1___Sc0000003	17729370	17729790	421	226	118	0.048672566371681415	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	14	2	203	3	1	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17730014-17730841	Cluster_1495	Pocillopora_meandrina_HIv1___Sc0000003	17730014	17730841	828	1138	282	0.06063268892794376	-	UAAAGUUUACUUGUUGUUCUUCUCUGAGU	136	4	1077	1	3	34	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17733611-17734037	Cluster_1496	Pocillopora_meandrina_HIv1___Sc0000003	17733611	17734037	427	166	63	0.0	-	UUUGAUUGACGUACGGUAUUUGAGACGC	20	1	156	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17787052-17787502	Cluster_1497	Pocillopora_meandrina_HIv1___Sc0000003	17787052	17787502	451	498	166	0.12650602409638553	-	UUAUUUUUGUUUCAAAUCGCCAUGUUCACU	71	8	432	3	4	6	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17824871-17825300	Cluster_1498	Pocillopora_meandrina_HIv1___Sc0000003	17824871	17825300	430	410	43	0.9975609756097561	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	167	0	410	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17891379-17891806	Cluster_1499	Pocillopora_meandrina_HIv1___Sc0000003	17891379	17891806	428	313	65	0.003194888178913738	-	UAGGCUGGUACCUUUGAAAAUUGAGGGC	52	6	280	0	1	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17906949-17907368	Cluster_1500	Pocillopora_meandrina_HIv1___Sc0000003	17906949	17907368	420	100	34	0.68	.	GCAACUUCCGCCUAGACUGAC	37	20	7	61	8	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17907446-17907876	Cluster_1501	Pocillopora_meandrina_HIv1___Sc0000003	17907446	17907876	431	877	136	0.0	-	AAGGAAACAAAUCGGUUUAAACUCACAUU	231	24	824	5	7	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17971672-17972100	Cluster_1502	Pocillopora_meandrina_HIv1___Sc0000003	17971672	17972100	429	159	32	1.0	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	69	0	151	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18010570-18011566	Cluster_1503	Pocillopora_meandrina_HIv1___Sc0000003	18010570	18011566	997	7903	538	0.9836770846513982	+	UUGGACUGUGCAUAACCAUUUGU	2151	28	5444	3	97	2218	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18046159-18046588	Cluster_1504	Pocillopora_meandrina_HIv1___Sc0000003	18046159	18046588	430	331	123	1.0	+	GAAUCUUAAUCUUCUCUCUGAGCAUA	20	68	164	27	23	18	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18052632-18053169	Cluster_1505	Pocillopora_meandrina_HIv1___Sc0000003	18052632	18053169	538	7386	731	0.001760086650419713	-	CUGUGCCGACGACUGGAGACAC	1043	749	1554	906	1757	1381	1039	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18105568-18105995	Cluster_1506	Pocillopora_meandrina_HIv1___Sc0000003	18105568	18105995	428	85	8	0.9882352941176471	+	UUGUCUACAGGAAGCCUGUCCAUUUUGU	78	2	80	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18106323-18106749	Cluster_1507	Pocillopora_meandrina_HIv1___Sc0000003	18106323	18106749	427	240	130	0.15416666666666667	-	UGAGUCGAGGUUAUUCACAAUACGAGC	43	6	214	0	2	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18107408-18107834	Cluster_1508	Pocillopora_meandrina_HIv1___Sc0000003	18107408	18107834	427	117	30	0.06837606837606838	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	61	3	108	3	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18358791-18359211	Cluster_1509	Pocillopora_meandrina_HIv1___Sc0000003	18358791	18359211	421	124	34	0.008064516129032258	-	CGGAGACGUCGAAUUCUGG	21	50	59	7	7	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18668899-18669328	Cluster_1510	Pocillopora_meandrina_HIv1___Sc0000003	18668899	18669328	430	158	26	0.006329113924050633	-	UUCGAUCUUAAAUUUACUGCAUGUUUCUA	62	0	158	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18739258-18739688	Cluster_1511	Pocillopora_meandrina_HIv1___Sc0000003	18739258	18739688	431	286	120	0.9965034965034965	+	UAUUUUUAAUCUCUUGCAUACCCUGUUGG	32	3	280	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18836097-18836526	Cluster_1512	Pocillopora_meandrina_HIv1___Sc0000003	18836097	18836526	430	400	102	0.8075	+	AUUGAUUCUAUUUUGUACGGCCUAGU	100	4	377	1	4	12	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18887952-18888505	Cluster_1513	Pocillopora_meandrina_HIv1___Sc0000003	18887952	18888505	554	2181	249	0.9110499770747363	+	UGAAGUCGAGCUAGAAGAGGA	525	880	520	655	100	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19027733-19028192	Cluster_1514	Pocillopora_meandrina_HIv1___Sc0000003	19027733	19028192	460	541	205	1.0	+	AUGCUGCCUUCCUUCUGAUA	45	175	200	61	30	28	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19032558-19032979	Cluster_1515	Pocillopora_meandrina_HIv1___Sc0000003	19032558	19032979	422	419	274	0.9976133651551312	+	CAUGUAUGUGGUCUUGAAAGA	9	62	214	46	29	29	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19040021-19040486	Cluster_1516	Pocillopora_meandrina_HIv1___Sc0000003	19040021	19040486	466	455	183	0.0	-	GAGAAAACCAUGCUGCCUUCCUUCUGAUA	36	125	182	58	25	33	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19182318-19182745	Cluster_1517	Pocillopora_meandrina_HIv1___Sc0000003	19182318	19182745	428	78	25	0.9487179487179487	+	UGUGGAUAAUUUAAUAACUGCAGUAGGGA	19	0	78	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19253236-19253686	Cluster_1518	Pocillopora_meandrina_HIv1___Sc0000003	19253236	19253686	451	1325	173	0.9433962264150944	+	UGAAGACUGGUCCUGAUAUCAUCAUAU	211	12	1215	10	6	66	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19272674-19273103	Cluster_1519	Pocillopora_meandrina_HIv1___Sc0000003	19272674	19273103	430	94	36	0.9468085106382979	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	30	0	92	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19321353-19321774	Cluster_1520	Pocillopora_meandrina_HIv1___Sc0000003	19321353	19321774	422	141	68	0.950354609929078	+	UAGGAUCGUUCUAGAAAACCAGCGUAAGA	23	5	124	2	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19363636-19364061	Cluster_1521	Pocillopora_meandrina_HIv1___Sc0000003	19363636	19364061	426	104	37	1.0	+	UGUGUAGAUAUGUCUUUUGGACAGGA	29	0	102	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12833-13749	Cluster_1522	Pocillopora_meandrina_HIv1___Sc0000004	12833	13749	917	999	375	0.8168168168168168	+	UAAACGUUGUUGUACGGGUUGUUCCCAGAUG	51	24	862	9	16	37	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13981-14409	Cluster_1523	Pocillopora_meandrina_HIv1___Sc0000004	13981	14409	429	175	18	0.9942857142857143	+	UUGACUGACAGAAGAUCUGGAAACUGAAGA	52	2	170	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:59217-59730	Cluster_1524	Pocillopora_meandrina_HIv1___Sc0000004	59217	59730	514	620	240	0.19516129032258064	-	UUUCAAAGCUUUUAUCAACUGUGGGA	26	3	565	6	2	20	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:59999-60410	Cluster_1525	Pocillopora_meandrina_HIv1___Sc0000004	59999	60410	412	200	87	0.055	-	UGUGGUUACGCCCUUCAAGUGAGAAAACUGA	38	3	194	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:61957-62666	Cluster_1526	Pocillopora_meandrina_HIv1___Sc0000004	61957	62666	710	342	145	0.0847953216374269	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	35	2	309	2	8	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:232183-233964	Cluster_1527	Pocillopora_meandrina_HIv1___Sc0000004	232183	233964	1782	3992	1245	0.999749498997996	+	GGGGCGAUAAACCAUACAAUGGACAUUU	454	538	2742	139	178	224	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:234171-234601	Cluster_1528	Pocillopora_meandrina_HIv1___Sc0000004	234171	234601	431	444	280	0.9977477477477478	+	UGGCAUAAUCUGUGUGGAGGACCUCAUUC	19	78	240	22	30	31	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:259160-259573	Cluster_1529	Pocillopora_meandrina_HIv1___Sc0000004	259160	259573	414	102	57	0.6568627450980392	.	UGAGACAUUUUGAGACACUCGUGAGACA	14	2	87	1	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:259608-260035	Cluster_1530	Pocillopora_meandrina_HIv1___Sc0000004	259608	260035	428	150	35	0.7066666666666667	.	UGAAAUUCCGAAUAAGUUCUCCAAAACC	42	3	141	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:270457-271009	Cluster_1531	Pocillopora_meandrina_HIv1___Sc0000004	270457	271009	553	222	83	0.9324324324324325	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	36	4	187	3	2	18	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:271362-271961	Cluster_1532	Pocillopora_meandrina_HIv1___Sc0000004	271362	271961	600	1490	279	0.8033557046979866	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	478	4	1420	2	6	12	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:396741-397439	Cluster_1533	Pocillopora_meandrina_HIv1___Sc0000004	396741	397439	699	686	185	0.12099125364431487	-	UUGGAUAAUUUUGACGAAACCAGAGACA	179	2	623	4	10	15	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:397704-398313	Cluster_1534	Pocillopora_meandrina_HIv1___Sc0000004	397704	398313	610	546	247	0.6648351648351648	.	UUAACUCCGAGGACACUCUUAGAAGGAUA	39	11	447	1	1	31	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:398645-399791	Cluster_1535	Pocillopora_meandrina_HIv1___Sc0000004	398645	399791	1147	1194	303	0.7428810720268006	.	AGCAUACUCGAAGAACUGCAAGUUAAUGGA	116	121	1026	6	11	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:400950-401796	Cluster_1536	Pocillopora_meandrina_HIv1___Sc0000004	400950	401796	847	591	175	0.2436548223350254	.	UGUGUUCGUUGAAUGGCUCCCCAUGCG	80	9	558	1	4	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:618407-618834	Cluster_1537	Pocillopora_meandrina_HIv1___Sc0000004	618407	618834	428	194	76	0.9896907216494846	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	33	1	186	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:619070-619497	Cluster_1538	Pocillopora_meandrina_HIv1___Sc0000004	619070	619497	428	354	178	0.8248587570621468	+	UCAUAACUGCUGGUUUGACGUAGUCGUC	35	21	301	3	2	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:620134-620557	Cluster_1539	Pocillopora_meandrina_HIv1___Sc0000004	620134	620557	424	82	28	0.9878048780487805	+	UGAACUUGAACUAUUUGCUGGAGACGAAAG	35	0	80	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:629145-629570	Cluster_1540	Pocillopora_meandrina_HIv1___Sc0000004	629145	629570	426	102	35	0.9607843137254902	+	UGUGUAGAUAUGUCUUUUGGACAGGA	27	1	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:791121-791723	Cluster_1541	Pocillopora_meandrina_HIv1___Sc0000004	791121	791723	603	428	144	0.11682242990654206	-	UCGGACUGUGCAUAACCAUUUGCAAAC	103	3	404	5	1	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1005934-1006362	Cluster_1542	Pocillopora_meandrina_HIv1___Sc0000004	1005934	1006362	429	83	23	0.9759036144578314	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	26	0	81	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1197941-1198368	Cluster_1543	Pocillopora_meandrina_HIv1___Sc0000004	1197941	1198368	428	276	38	0.050724637681159424	-	UGUGCAAUAUUAACUCUAAGCUGGUCUU	141	0	275	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1599741-1600171	Cluster_1544	Pocillopora_meandrina_HIv1___Sc0000004	1599741	1600171	431	1180	5	0.0	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	1165	0	1180	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1686231-1686659	Cluster_1545	Pocillopora_meandrina_HIv1___Sc0000004	1686231	1686659	429	160	19	0.0	-	UGAAGAUUUGAACAAUGUAAGAAUUGAAC	122	0	160	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1746478-1746899	Cluster_1546	Pocillopora_meandrina_HIv1___Sc0000004	1746478	1746899	422	74	1	0.0	-	UCUGACGAAGGGCUGACACUCG	74	0	0	0	74	0	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1826771-1827308	Cluster_1547	Pocillopora_meandrina_HIv1___Sc0000004	1826771	1827308	538	453	136	0.0	-	ACCGUGUUUUGUUUGAUCCUUG	51	111	156	28	71	28	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1989511-1989934	Cluster_1548	Pocillopora_meandrina_HIv1___Sc0000004	1989511	1989934	424	100	33	0.22	.	AGUGUUUGAAUUUUUGAAAGAAAUGGUC	36	6	89	3	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2224061-2224490	Cluster_1549	Pocillopora_meandrina_HIv1___Sc0000004	2224061	2224490	430	193	52	0.9844559585492227	+	AAACUGAUAAUAAUGCUCUCUGUGUCAUGC	70	1	168	0	0	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2261094-2261578	Cluster_1550	Pocillopora_meandrina_HIv1___Sc0000004	2261094	2261578	485	391	71	0.7442455242966752	.	UAAUCUUCAAUGGACGAUGCCAACUCUUUGA	185	3	378	4	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2308935-2309364	Cluster_1551	Pocillopora_meandrina_HIv1___Sc0000004	2308935	2309364	430	2320	86	0.00603448275862069	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAA	788	419	1859	21	6	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2741143-2741832	Cluster_1552	Pocillopora_meandrina_HIv1___Sc0000004	2741143	2741832	690	872	213	0.9311926605504587	+	AUUUGUGAAAGAAAUGAUUUGGAGACCCC	103	16	751	10	31	8	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2742408-2742838	Cluster_1553	Pocillopora_meandrina_HIv1___Sc0000004	2742408	2742838	431	1510	151	0.03443708609271523	-	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	399	2	1497	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2743580-2744025	Cluster_1554	Pocillopora_meandrina_HIv1___Sc0000004	2743580	2744025	446	284	49	0.6936619718309859	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	92	5	273	3	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2744502-2745277	Cluster_1555	Pocillopora_meandrina_HIv1___Sc0000004	2744502	2745277	776	1282	245	0.6684867394695788	.	UCACCAUGAAAAGACUCUGGGCCAAAG	129	8	1200	1	4	20	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2776672-2777091	Cluster_1556	Pocillopora_meandrina_HIv1___Sc0000004	2776672	2777091	420	2077	19	1.0	+	GAAGUUCUGGUUUAAAAAA	888	2072	0	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2790502-2791317	Cluster_1557	Pocillopora_meandrina_HIv1___Sc0000004	2790502	2791317	816	3278	574	0.04850518608907871	-	UGUUUACGUUGUGCAUCCAUGGUUUUGU	452	9	3169	11	11	23	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2799128-2801584	Cluster_1558	Pocillopora_meandrina_HIv1___Sc0000004	2799128	2801584	2457	12247	2997	0.03821344002612885	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	496	130	11124	53	94	183	663	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2802251-2802795	Cluster_1559	Pocillopora_meandrina_HIv1___Sc0000004	2802251	2802795	545	442	179	0.19909502262443438	-	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	103	9	371	23	18	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2813610-2814029	Cluster_1560	Pocillopora_meandrina_HIv1___Sc0000004	2813610	2814029	420	348	193	0.0028735632183908046	-	CUGCGAACUGCUUUGAGCCA	13	129	142	20	22	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3009068-3009494	Cluster_1561	Pocillopora_meandrina_HIv1___Sc0000004	3009068	3009494	427	119	55	0.09243697478991597	-	AUCUUUUUAAUUCACUGAAUCUCUUGGUA	35	7	107	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3088358-3088780	Cluster_1562	Pocillopora_meandrina_HIv1___Sc0000004	3088358	3088780	423	241	72	0.17427385892116182	-	UUCGCGUCUGAAGCUGUUAGAGU	62	24	42	6	37	121	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3210060-3210488	Cluster_1563	Pocillopora_meandrina_HIv1___Sc0000004	3210060	3210488	429	93	31	0.978494623655914	+	UGACUUUAUUUGCGUCACGGAUUAGCUGGC	25	2	90	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3245027-3246119	Cluster_1564	Pocillopora_meandrina_HIv1___Sc0000004	3245027	3246119	1093	110169	11923	0.9992193811326235	+	AAGGCGAGCUCAGCGAGAACA	2029	32208	38999	11302	10732	8191	8737	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3432324-3432751	Cluster_1565	Pocillopora_meandrina_HIv1___Sc0000004	3432324	3432751	428	253	66	0.03162055335968379	-	UCUAGCAGAUCGUACUCCUCAAGGUGCU	63	0	246	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3629589-3630377	Cluster_1566	Pocillopora_meandrina_HIv1___Sc0000004	3629589	3630377	789	873	339	0.058419243986254296	-	UCCGUGACACAACGACUUUGCCUUGCUU	109	4	845	1	4	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3630547-3630995	Cluster_1567	Pocillopora_meandrina_HIv1___Sc0000004	3630547	3630995	449	471	209	0.19957537154989385	-	UAUGACGUUCCAGAAUCUUUGACAAAA	29	3	445	4	6	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3631517-3631946	Cluster_1568	Pocillopora_meandrina_HIv1___Sc0000004	3631517	3631946	430	154	58	0.012987012987012988	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	22	2	151	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3773184-3773603	Cluster_1569	Pocillopora_meandrina_HIv1___Sc0000004	3773184	3773603	420	157	100	0.0	-	CAUGGGAUUCGGACUGUUUGACUAACCA	7	34	88	7	9	16	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3776194-3776606	Cluster_1570	Pocillopora_meandrina_HIv1___Sc0000004	3776194	3776606	413	221	149	0.0	-	CACAUCAAAGGCAAUGUAGGCUU	10	48	101	16	20	19	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3776658-3777077	Cluster_1571	Pocillopora_meandrina_HIv1___Sc0000004	3776658	3777077	420	154	102	0.0	-	CUGCGUGGUAGAGCUGAAAUUCU	10	31	61	14	16	21	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3791884-3792309	Cluster_1572	Pocillopora_meandrina_HIv1___Sc0000004	3791884	3792309	426	92	42	0.11956521739130435	-	UAAUCGUUGGCUUUUUCUCGAGACGUG	13	6	84	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3792382-3792808	Cluster_1573	Pocillopora_meandrina_HIv1___Sc0000004	3792382	3792808	427	151	46	0.9536423841059603	+	UAAUCGUUGGCUUUUUCUCGAGACGUG	59	13	131	4	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3842859-3843307	Cluster_1574	Pocillopora_meandrina_HIv1___Sc0000004	3842859	3843307	449	6155	156	0.00016246953696181965	-	CUCCCGGACAGGCCCCCA	4335	6048	90	12	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4084450-4084929	Cluster_1575	Pocillopora_meandrina_HIv1___Sc0000004	4084450	4084929	480	394	78	0.012690355329949238	-	CAACAAAUCAAACUUAGAGGCUCUUCAGCGG	111	2	385	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4090054-4090483	Cluster_1576	Pocillopora_meandrina_HIv1___Sc0000004	4090054	4090483	430	264	85	0.928030303030303	+	UGAACAUUCCGGUAUUCUUUUCGCUGAAUU	70	2	254	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4163017-4163444	Cluster_1577	Pocillopora_meandrina_HIv1___Sc0000004	4163017	4163444	428	249	82	0.9718875502008032	+	CCAUUUCCCAAGUAGUCUCUCUCAAAGG	59	4	226	2	4	13	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4319823-4320235	Cluster_1578	Pocillopora_meandrina_HIv1___Sc0000004	4319823	4320235	413	100	47	0.88	+	UGAAAAACUGUGACCGAGGUCU	9	49	1	23	20	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4328549-4328980	Cluster_1579	Pocillopora_meandrina_HIv1___Sc0000004	4328549	4328980	432	635	80	0.9968503937007874	+	CGGCCUAAAAAAAAAAAAAAAAAAAAAAAA	119	85	466	11	20	32	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4376005-4376654	Cluster_1580	Pocillopora_meandrina_HIv1___Sc0000004	4376005	4376654	650	769	284	0.20546163849154747	.	UGACUAUCAUCUGAAAGGGGCAAUUGGU	67	35	674	4	11	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4376700-4377127	Cluster_1581	Pocillopora_meandrina_HIv1___Sc0000004	4376700	4377127	428	202	88	0.8613861386138614	+	UAUGCAUUCAAUGAUCGUGGUCGG	19	1	147	1	6	6	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4378333-4378756	Cluster_1582	Pocillopora_meandrina_HIv1___Sc0000004	4378333	4378756	424	168	71	0.27976190476190477	.	UGUUACAAAACCAUUAGAACUAUCAGUU	31	5	132	2	4	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4379913-4380388	Cluster_1583	Pocillopora_meandrina_HIv1___Sc0000004	4379913	4380388	476	281	93	0.9074733096085409	+	UUUUAUCUCUGCUAUUCCCAUAUCAAGG	41	5	268	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4485348-4485775	Cluster_1584	Pocillopora_meandrina_HIv1___Sc0000004	4485348	4485775	428	180	84	0.12777777777777777	-	UAAUGAACGUAUAGCCAUCCAGUUGAAC	12	2	172	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4485786-4486210	Cluster_1585	Pocillopora_meandrina_HIv1___Sc0000004	4485786	4486210	425	183	121	0.20765027322404372	.	UAACACUAUAAACAUUCUGAGGGCGAU	6	2	162	3	5	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4818222-4818644	Cluster_1586	Pocillopora_meandrina_HIv1___Sc0000004	4818222	4818644	423	214	143	1.0	+	AAUGCGGUGGAAUCGAUAAA	7	57	88	14	21	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4819057-4819499	Cluster_1587	Pocillopora_meandrina_HIv1___Sc0000004	4819057	4819499	443	301	183	1.0	+	CAAGGCUGAGCGUGAGCGU	21	106	118	22	18	23	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4819743-4820269	Cluster_1588	Pocillopora_meandrina_HIv1___Sc0000004	4819743	4820269	527	427	304	1.0	+	AUUGGUUGUUGCUGCUGGU	6	154	139	46	24	27	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4822114-4822623	Cluster_1589	Pocillopora_meandrina_HIv1___Sc0000004	4822114	4822623	510	486	327	0.9979423868312757	+	CCUGGUGACAAUGUUGGCU	9	133	185	45	54	31	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4822932-4823767	Cluster_1590	Pocillopora_meandrina_HIv1___Sc0000004	4822932	4823767	836	1682	960	1.0	+	AGUCAAUCAUGCUGUAGUAGUU	25	367	775	126	145	106	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5173417-5173842	Cluster_1591	Pocillopora_meandrina_HIv1___Sc0000004	5173417	5173842	426	93	33	0.021505376344086023	-	UUCUGCCGUUUUGGGCUUGCUUUGCCAUC	22	0	90	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5174422-5174920	Cluster_1592	Pocillopora_meandrina_HIv1___Sc0000004	5174422	5174920	499	1208	172	0.8882450331125827	+	UUCGAGUGCAAAGAUGAAGGAGCUGGUG	246	30	892	7	3	44	232	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5175570-5175998	Cluster_1593	Pocillopora_meandrina_HIv1___Sc0000004	5175570	5175998	429	178	68	0.09550561797752809	-	UAUAUUCGCCUGGAAUUAGCCCUCCCCCU	17	4	173	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5176316-5176743	Cluster_1594	Pocillopora_meandrina_HIv1___Sc0000004	5176316	5176743	428	137	43	0.0	-	UGGGAUUGCUUACUCCUGGUGUUGGUAUA	24	0	127	1	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5176970-5177398	Cluster_1595	Pocillopora_meandrina_HIv1___Sc0000004	5176970	5177398	429	117	40	0.5470085470085471	.	UGACAAUGAACUCGACAGAAACUAUUUAG	27	0	114	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5178359-5178783	Cluster_1596	Pocillopora_meandrina_HIv1___Sc0000004	5178359	5178783	425	296	63	0.9527027027027027	+	AUGGACAGAACACAGGAAGUGCU	68	5	97	2	11	143	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5179682-5180102	Cluster_1597	Pocillopora_meandrina_HIv1___Sc0000004	5179682	5180102	421	96	22	0.010416666666666666	-	UGCGUUUCCAUUACUUCUGCGUAGAAUA	29	2	85	0	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5181406-5181831	Cluster_1598	Pocillopora_meandrina_HIv1___Sc0000004	5181406	5181831	426	95	35	0.021052631578947368	-	UGAAAUCUCCUGCUCCCUCUUUAAUGAGC	25	5	86	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5206769-5207196	Cluster_1599	Pocillopora_meandrina_HIv1___Sc0000004	5206769	5207196	428	211	49	0.009478672985781991	-	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	84	0	206	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5570357-5571044	Cluster_1600	Pocillopora_meandrina_HIv1___Sc0000004	5570357	5571044	688	4712	200	0.016129032258064516	-	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	2086	2	4657	1	11	17	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5818426-5818894	Cluster_1601	Pocillopora_meandrina_HIv1___Sc0000004	5818426	5818894	469	380	189	0.9921052631578947	+	ACCAGGAUGGCCGAGUGG	29	175	95	35	21	23	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6050031-6050451	Cluster_1602	Pocillopora_meandrina_HIv1___Sc0000004	6050031	6050451	421	77	35	1.0	+	UCAGCACGUGUACUAUGCUGCUCACUCGGU	16	7	68	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6129917-6130372	Cluster_1603	Pocillopora_meandrina_HIv1___Sc0000004	6129917	6130372	456	306	124	0.6143790849673203	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	43	7	229	2	12	32	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6156615-6157956	Cluster_1604	Pocillopora_meandrina_HIv1___Sc0000004	6156615	6157956	1342	6316	1273	0.16276124129195693	-	UCACAGGUAUAUAUUCUAUCGCUCUUCAAC	933	68	5893	31	49	105	170	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6169126-6169554	Cluster_1605	Pocillopora_meandrina_HIv1___Sc0000004	6169126	6169554	429	625	76	1.0	+	UCAGAGAUGUCAACCUUAUUGCUACUAGC	297	1	619	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6184636-6185065	Cluster_1606	Pocillopora_meandrina_HIv1___Sc0000004	6184636	6185065	430	111	35	1.0	+	UCAACAUGUGUACUAUGCUGCUCACCCGGU	33	1	108	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6216721-6217149	Cluster_1607	Pocillopora_meandrina_HIv1___Sc0000004	6216721	6217149	429	230	101	0.7869565217391304	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	71	40	161	22	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6226334-6226763	Cluster_1608	Pocillopora_meandrina_HIv1___Sc0000004	6226334	6226763	430	123	30	1.0	+	UCAACAUGUGUACUAUGCUGCUCACCCGGU	30	0	119	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6280470-6280899	Cluster_1609	Pocillopora_meandrina_HIv1___Sc0000004	6280470	6280899	430	192	67	1.0	+	UCAACAUGUGUACUAUGCUGCUCACUCGGU	46	5	176	1	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6320163-6320581	Cluster_1610	Pocillopora_meandrina_HIv1___Sc0000004	6320163	6320581	419	119	64	0.11764705882352941	-	UGAUUGCAUCAUACUGGCUUUAACCUGC	7	0	113	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6321490-6321910	Cluster_1611	Pocillopora_meandrina_HIv1___Sc0000004	6321490	6321910	421	184	89	0.8206521739130435	+	UGUUCUGUGGACACAAUCGAC	22	108	8	56	8	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6357059-6357488	Cluster_1612	Pocillopora_meandrina_HIv1___Sc0000004	6357059	6357488	430	424	39	0.0023584905660377358	-	ACAACACUUGUAUUAUGCCGCUCACUCAGU	170	26	367	3	10	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6506657-6507473	Cluster_1613	Pocillopora_meandrina_HIv1___Sc0000004	6506657	6507473	817	2204	537	0.1724137931034483	-	UACUGUACCAUCUAUGAAGCCAAAGCAAUU	306	12	1928	9	13	47	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6508196-6509247	Cluster_1614	Pocillopora_meandrina_HIv1___Sc0000004	6508196	6509247	1052	1213	444	0.8639736191261336	+	UGUUAACUUUAAAUCUUGGAAUUUUCA	86	17	1105	13	14	20	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6593926-6594402	Cluster_1615	Pocillopora_meandrina_HIv1___Sc0000004	6593926	6594402	477	312	143	0.9102564102564102	+	GGUGAGAGACUGUGACCGAGG	24	141	15	99	37	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6749168-6750138	Cluster_1616	Pocillopora_meandrina_HIv1___Sc0000004	6749168	6750138	971	630	165	0.6984126984126984	.	UAGGAAGAUACAAGACUACAAAUUUU	112	14	565	4	5	16	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6750183-6750612	Cluster_1617	Pocillopora_meandrina_HIv1___Sc0000004	6750183	6750612	430	309	56	0.9870550161812298	+	UUAAUGCGGGAAACAGUACUAAUUACAUC	110	0	293	2	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6758212-6758642	Cluster_1618	Pocillopora_meandrina_HIv1___Sc0000004	6758212	6758642	431	179	54	0.9553072625698324	+	CAUUACUGGAAAGGCACUUACUGUGGAAAGU	20	1	155	1	1	1	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7204213-7204632	Cluster_1619	Pocillopora_meandrina_HIv1___Sc0000004	7204213	7204632	420	588	31	0.9965986394557823	+	CGGCCUGAAGAAAAAAAA	106	551	1	33	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7299894-7300321	Cluster_1620	Pocillopora_meandrina_HIv1___Sc0000004	7299894	7300321	428	190	27	0.0	-	UUAUCUUUGCCAGUUCUGACGUACUCGU	82	1	187	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7319177-7319628	Cluster_1621	Pocillopora_meandrina_HIv1___Sc0000004	7319177	7319628	452	826	184	0.29418886198547217	.	UGAUUACAUCUUCCGUCUAUUCCUGCUGGGC	118	4	792	0	2	7	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7321650-7322740	Cluster_1622	Pocillopora_meandrina_HIv1___Sc0000004	7321650	7322740	1091	3343	1040	0.8232126832186659	+	UCGUAUAGUAUGGAUCCUCGUGCAGUGA	105	29	2995	40	33	94	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7323665-7324799	Cluster_1623	Pocillopora_meandrina_HIv1___Sc0000004	7323665	7324799	1135	11832	486	0.9952670723461798	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	3129	29	11470	134	13	30	156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7456533-7456962	Cluster_1624	Pocillopora_meandrina_HIv1___Sc0000004	7456533	7456962	430	415	43	0.9927710843373494	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	205	0	413	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7490373-7490802	Cluster_1625	Pocillopora_meandrina_HIv1___Sc0000004	7490373	7490802	430	353	75	1.0	+	UAAGACUGUGUAACCCAAAAAGUUUGGAGU	86	28	325	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7491751-7492154	Cluster_1626	Pocillopora_meandrina_HIv1___Sc0000004	7491751	7492154	404	101	47	0.9801980198019802	+	UAGACAAAACUCUUAAAUCCUGGAUGAAACU	19	1	92	3	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7558811-7560067	Cluster_1627	Pocillopora_meandrina_HIv1___Sc0000004	7558811	7560067	1257	4765	630	0.5164742917103883	.	UGGUAUUUUGAUUUUCUGAUCGACAAGA	785	81	4220	93	28	72	271	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7756727-7757147	Cluster_1628	Pocillopora_meandrina_HIv1___Sc0000004	7756727	7757147	421	2648	31	0.0	-	AACUUUCCGAGGUCGCGGUC	1976	2636	3	3	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7966694-7967111	Cluster_1629	Pocillopora_meandrina_HIv1___Sc0000004	7966694	7967111	418	107	38	0.056074766355140186	-	AACGGACAGCUGAACCAC	33	70	14	10	8	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8058190-8058941	Cluster_1630	Pocillopora_meandrina_HIv1___Sc0000004	8058190	8058941	752	835	260	0.9676646706586827	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	90	1	813	5	5	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8059222-8060546	Cluster_1631	Pocillopora_meandrina_HIv1___Sc0000004	8059222	8060546	1325	1592	688	0.9221105527638191	+	UGUGAGAAAAGGAUUGAUCUGUUUUGC	41	10	1488	6	6	18	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8410165-8410583	Cluster_1632	Pocillopora_meandrina_HIv1___Sc0000004	8410165	8410583	419	169	96	0.8816568047337278	+	GCACAGGUUAUUUCUUACGGUGGAAUCA	22	21	113	11	9	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8677285-8678021	Cluster_1633	Pocillopora_meandrina_HIv1___Sc0000004	8677285	8678021	737	3940	546	0.9784263959390863	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	796	16	3862	4	5	18	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8679146-8680346	Cluster_1634	Pocillopora_meandrina_HIv1___Sc0000004	8679146	8680346	1201	2691	852	0.8353771832032701	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	123	28	2474	15	26	43	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8680807-8681689	Cluster_1635	Pocillopora_meandrina_HIv1___Sc0000004	8680807	8681689	883	4624	745	0.8505622837370242	+	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	610	17	4395	36	11	58	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8681891-8682918	Cluster_1636	Pocillopora_meandrina_HIv1___Sc0000004	8681891	8682918	1028	4408	947	0.8940562613430127	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	429	57	4120	15	28	69	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8682989-8683509	Cluster_1637	Pocillopora_meandrina_HIv1___Sc0000004	8682989	8683509	521	3520	494	0.5164772727272727	.	ACAAGACAGAAUUCCAGCUGAUACAGA	521	41	3209	8	44	85	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8684868-8685298	Cluster_1638	Pocillopora_meandrina_HIv1___Sc0000004	8684868	8685298	431	935	103	0.009625668449197862	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	541	6	908	2	2	1	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8685925-8686334	Cluster_1639	Pocillopora_meandrina_HIv1___Sc0000004	8685925	8686334	410	96	45	0.3854166666666667	.	AGAGACUAUUGUGAUAGUGAACAGU	15	2	90	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8686796-8688556	Cluster_1640	Pocillopora_meandrina_HIv1___Sc0000004	8686796	8688556	1761	2216	730	0.21660649819494585	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	91	24	2045	8	9	43	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8689035-8689462	Cluster_1641	Pocillopora_meandrina_HIv1___Sc0000004	8689035	8689462	428	134	67	0.029850746268656716	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	17	2	128	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8689517-8690254	Cluster_1642	Pocillopora_meandrina_HIv1___Sc0000004	8689517	8690254	738	1129	328	0.06554472984942426	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	115	4	1065	4	9	22	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8784956-8785443	Cluster_1643	Pocillopora_meandrina_HIv1___Sc0000004	8784956	8785443	488	280	54	1.0	+	UACAUCACUGCUGGCUGAACUAAUUUGAUU	88	1	277	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8818786-8819216	Cluster_1644	Pocillopora_meandrina_HIv1___Sc0000004	8818786	8819216	431	237	99	0.7257383966244726	.	AUGUUGGAAAUUUGGCUGGAAUGAAGA	13	2	221	1	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8860293-8860710	Cluster_1645	Pocillopora_meandrina_HIv1___Sc0000004	8860293	8860710	418	179	121	0.01675977653631285	-	CAGGUGGUUGACCAGUAGAGU	7	40	56	26	18	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8895062-8895930	Cluster_1646	Pocillopora_meandrina_HIv1___Sc0000004	8895062	8895930	869	1385	559	0.31841155234657037	.	GAAGGCUGCGUGUUCAGGUCACGUCGGGGU	87	533	474	184	60	86	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9012627-9013112	Cluster_1647	Pocillopora_meandrina_HIv1___Sc0000004	9012627	9013112	486	1033	278	0.000968054211035818	-	CAGCUAUGAUGACAAAAGGAUU	121	100	494	91	202	45	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9015415-9015843	Cluster_1648	Pocillopora_meandrina_HIv1___Sc0000004	9015415	9015843	429	261	106	0.0	-	AUCUGUACUAUUGAGUACCUCUGAGCUG	25	34	169	26	23	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9027336-9027793	Cluster_1649	Pocillopora_meandrina_HIv1___Sc0000004	9027336	9027793	458	1186	402	0.0008431703204047217	-	CCAAUGGAUAAGGCAUCUGACUGCGAAUC	27	294	549	67	104	87	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9213473-9213903	Cluster_1650	Pocillopora_meandrina_HIv1___Sc0000004	9213473	9213903	431	303	88	0.09900990099009901	-	UAGCAGAUAUAAAUCGAGCAGGU	81	7	175	4	3	112	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9356985-9357413	Cluster_1651	Pocillopora_meandrina_HIv1___Sc0000004	9356985	9357413	429	113	41	0.9911504424778761	+	UGUGAUUGCACGUUCUAUUCUCUGUUGUAU	39	3	100	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9389236-9389665	Cluster_1652	Pocillopora_meandrina_HIv1___Sc0000004	9389236	9389665	430	265	46	0.01509433962264151	-	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	141	3	231	0	1	1	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9487258-9487685	Cluster_1653	Pocillopora_meandrina_HIv1___Sc0000004	9487258	9487685	428	184	69	0.9782608695652174	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	28	2	172	1	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9489268-9489692	Cluster_1654	Pocillopora_meandrina_HIv1___Sc0000004	9489268	9489692	425	102	36	0.9607843137254902	+	UAUUUGCACCGUUUUUCUUGAAUAUAGA	21	1	98	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9619758-9620185	Cluster_1655	Pocillopora_meandrina_HIv1___Sc0000004	9619758	9620185	428	210	101	0.7857142857142857	.	UGAUGCAUUCUUUCUUUUCCACUGAAAUU	10	2	198	0	1	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9932247-9932676	Cluster_1656	Pocillopora_meandrina_HIv1___Sc0000004	9932247	9932676	430	293	55	0.07508532423208192	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	100	3	287	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9933800-9934545	Cluster_1657	Pocillopora_meandrina_HIv1___Sc0000004	9933800	9934545	746	631	271	0.5356576862123613	.	AGCGAUUAGAAGAGCUAGACAUCAUCGAGA	94	8	579	4	7	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9934591-9936192	Cluster_1658	Pocillopora_meandrina_HIv1___Sc0000004	9934591	9936192	1602	4021	1138	0.38448147227057944	.	UGCAUACAUAGUUCACGUAGUCUUCUGC	211	43	3544	35	54	94	251	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9936436-9937029	Cluster_1659	Pocillopora_meandrina_HIv1___Sc0000004	9936436	9937029	594	1132	278	0.06537102473498234	-	UGAAUACAUGUAUGUCUGGAAA	132	6	860	2	136	110	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9953190-9953618	Cluster_1660	Pocillopora_meandrina_HIv1___Sc0000004	9953190	9953618	429	112	24	0.9642857142857143	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	2	110	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9953718-9954145	Cluster_1661	Pocillopora_meandrina_HIv1___Sc0000004	9953718	9954145	428	252	73	0.9642857142857143	+	UUGGAACGUGUUGCUGAACGCUUGUUAU	89	21	221	0	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10093229-10093818	Cluster_1662	Pocillopora_meandrina_HIv1___Sc0000004	10093229	10093818	590	765	215	0.6705882352941176	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	86	20	691	10	16	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10204248-10204676	Cluster_1663	Pocillopora_meandrina_HIv1___Sc0000004	10204248	10204676	429	458	115	0.9585152838427947	+	UUGGUAAUAUUUUGCUUCUCGGCUGGCU	76	2	449	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10221371-10221800	Cluster_1664	Pocillopora_meandrina_HIv1___Sc0000004	10221371	10221800	430	142	44	0.9577464788732394	+	UGAGAUGUAAACUUGUGAAUCAUUAGCACA	58	2	136	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10269151-10269644	Cluster_1665	Pocillopora_meandrina_HIv1___Sc0000004	10269151	10269644	494	689	240	0.5108853410740203	.	UAUGUCAACUGUAAAUUGUCCCUUCUUU	45	7	618	12	7	12	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10271751-10272563	Cluster_1666	Pocillopora_meandrina_HIv1___Sc0000004	10271751	10272563	813	1123	191	0.016918967052537846	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	136	3	1031	0	1	58	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10318317-10319161	Cluster_1667	Pocillopora_meandrina_HIv1___Sc0000004	10318317	10319161	845	792	225	0.8308080808080808	+	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	182	12	759	2	2	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10656026-10656455	Cluster_1668	Pocillopora_meandrina_HIv1___Sc0000004	10656026	10656455	430	224	68	0.1875	-	AUACUGAAAAACUUAAGUUACCAGAGCGUU	68	3	220	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10678089-10678496	Cluster_1669	Pocillopora_meandrina_HIv1___Sc0000004	10678089	10678496	408	144	68	1.0	+	UGAGUGUGCUUGUUGACUUCUGCUUGC	8	1	143	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10679398-10679825	Cluster_1670	Pocillopora_meandrina_HIv1___Sc0000004	10679398	10679825	428	85	25	1.0	+	UAAGACAUUUCGCAGAUUUUGACACUCGUU	28	0	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10712606-10713456	Cluster_1671	Pocillopora_meandrina_HIv1___Sc0000004	10712606	10713456	851	759	237	0.09617918313570488	-	UUGGAUAAUUUUGACGAAACCAGAGACA	168	2	710	4	11	8	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10713720-10714264	Cluster_1672	Pocillopora_meandrina_HIv1___Sc0000004	10713720	10714264	545	385	151	0.8935064935064935	+	AGUUUGCUGAUUUCCUGGUGCUUUGCGA	29	5	320	1	4	12	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10714677-10716485	Cluster_1673	Pocillopora_meandrina_HIv1___Sc0000004	10714677	10716485	1809	1935	734	0.5229974160206718	.	AGCAUACUCGAAGAACUGCAAGUUAAUGG	121	123	1697	9	17	37	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10716754-10717336	Cluster_1674	Pocillopora_meandrina_HIv1___Sc0000004	10716754	10717336	583	668	207	0.7320359281437125	.	AAGUUCAAGAUGGAUUUCAGGGCCAGAGU	88	8	629	1	2	3	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10718644-10719421	Cluster_1675	Pocillopora_meandrina_HIv1___Sc0000004	10718644	10719421	778	517	186	0.18181818181818182	-	UGUGUUCGUUGAAUGGCUCCCCAUGCG	77	82	397	23	8	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10869965-10870513	Cluster_1676	Pocillopora_meandrina_HIv1___Sc0000004	10869965	10870513	549	1932	459	0.0	-	UUGCACAGUCGGCACCGAGCAUGGC	425	224	1186	219	99	76	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10878018-10878484	Cluster_1677	Pocillopora_meandrina_HIv1___Sc0000004	10878018	10878484	467	716	215	0.025139664804469275	-	UGACUGACUGUGCUUGUGUACGAUACACGAC	75	4	686	1	5	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10878954-10879379	Cluster_1678	Pocillopora_meandrina_HIv1___Sc0000004	10878954	10879379	426	89	29	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	26	0	87	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10924989-10925417	Cluster_1679	Pocillopora_meandrina_HIv1___Sc0000004	10924989	10925417	429	353	37	0.9178470254957507	+	UGUGAUGUAGAUUGCAACAUUUCGACUGC	134	11	329	3	5	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11040418-11041018	Cluster_1680	Pocillopora_meandrina_HIv1___Sc0000004	11040418	11041018	601	3206	204	0.09107922645040549	-	UAGGUGAACCUUGCAAGUGGAUCUUUUGU	459	151	2730	18	31	39	237	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11044366-11044795	Cluster_1681	Pocillopora_meandrina_HIv1___Sc0000004	11044366	11044795	430	159	43	0.0	-	UCCGUGUGUUUGUUUGGAACAUAUUUACUC	34	5	152	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11359230-11359639	Cluster_1682	Pocillopora_meandrina_HIv1___Sc0000004	11359230	11359639	410	105	27	0.41904761904761906	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	22	0	105	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11425654-11426073	Cluster_1683	Pocillopora_meandrina_HIv1___Sc0000004	11425654	11426073	420	81	31	0.012345679012345678	-	UAGGUUCUUCCGACUUCAUUCCUGUAGC	27	0	79	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11493874-11494300	Cluster_1684	Pocillopora_meandrina_HIv1___Sc0000004	11493874	11494300	427	141	66	0.9078014184397163	+	UGAGUUGCUGCUUUGGACGAAAUUUCGA	36	1	128	5	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11495868-11496292	Cluster_1685	Pocillopora_meandrina_HIv1___Sc0000004	11495868	11496292	425	155	38	0.10967741935483871	-	AAUUGUGAUUUUGUUCAUUGAAUUUAG	32	1	145	1	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11497691-11498134	Cluster_1686	Pocillopora_meandrina_HIv1___Sc0000004	11497691	11498134	444	1092	96	0.9972527472527473	+	UGAGACUUUGAUUUUAACUGCUCUAAAAUGC	556	2	1080	2	6	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11655863-11656418	Cluster_1687	Pocillopora_meandrina_HIv1___Sc0000004	11655863	11656418	556	5712	561	0.0015756302521008404	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1332	12	5670	2	12	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11656449-11658502	Cluster_1688	Pocillopora_meandrina_HIv1___Sc0000004	11656449	11658502	2054	5476	1694	0.017713659605551497	-	UCCGAUCUGUUUUCAAGGUUUUGACCACA	283	21	5217	42	36	68	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11732494-11732972	Cluster_1689	Pocillopora_meandrina_HIv1___Sc0000004	11732494	11732972	479	468	168	0.9294871794871795	+	UGAGUUGCUGCUUUGGACGAAAUUUCGA	46	4	431	8	2	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11736311-11736752	Cluster_1690	Pocillopora_meandrina_HIv1___Sc0000004	11736311	11736752	442	976	98	0.9948770491803278	+	UGAGACUUUGAUUUUAACUGCUCUAAAAUGC	507	2	964	3	6	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11950722-11951692	Cluster_1691	Pocillopora_meandrina_HIv1___Sc0000004	11950722	11951692	971	9943	1362	0.6562405712561601	.	UGCAAUCACAAUGAGCAGACAGAACUUUGC	702	161	8742	138	178	380	344	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12450173-12450798	Cluster_1692	Pocillopora_meandrina_HIv1___Sc0000004	12450173	12450798	626	544	260	0.6838235294117647	.	CUGUCUCUUAGAACACACGCCUGG	44	3	420	7	12	17	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12500684-12501113	Cluster_1693	Pocillopora_meandrina_HIv1___Sc0000004	12500684	12501113	430	368	67	0.8125	+	UAAGAUCUGAUACAUUCUUUGGCGGUGGUC	91	0	360	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12648235-12648664	Cluster_1694	Pocillopora_meandrina_HIv1___Sc0000004	12648235	12648664	430	132	60	0.9696969696969697	+	UGUUUACUUUCUUUACAACUUCGGAUACGUG	27	1	127	2	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12699319-12699742	Cluster_1695	Pocillopora_meandrina_HIv1___Sc0000004	12699319	12699742	424	131	55	0.022900763358778626	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	31	0	129	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12810673-12811100	Cluster_1696	Pocillopora_meandrina_HIv1___Sc0000004	12810673	12811100	428	159	46	0.006289308176100629	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	42	1	154	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12850438-12850857	Cluster_1697	Pocillopora_meandrina_HIv1___Sc0000004	12850438	12850857	420	251	150	0.9840637450199203	+	UUAUUCAUUUUACUUCUCCUUC	17	74	75	29	41	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12885677-12886106	Cluster_1698	Pocillopora_meandrina_HIv1___Sc0000004	12885677	12886106	430	174	26	0.0	-	UCAACAGCCUGAACUUGUCUUCACAAGACU	52	0	172	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12979185-12979604	Cluster_1699	Pocillopora_meandrina_HIv1___Sc0000004	12979185	12979604	420	78	38	0.038461538461538464	-	UAGGUUCUUCCGACUUCAUUCCUGUAGC	25	0	77	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13474937-13475385	Cluster_1700	Pocillopora_meandrina_HIv1___Sc0000004	13474937	13475385	449	576	159	0.9392361111111112	+	UGUUCUCUAUCAGGUACACGGACAGGAU	38	11	541	1	5	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13494281-13494708	Cluster_1701	Pocillopora_meandrina_HIv1___Sc0000004	13494281	13494708	428	180	39	1.0	+	UGGACGGUUCAACUCCGAGACUUUGC	41	1	179	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13496622-13497814	Cluster_1702	Pocillopora_meandrina_HIv1___Sc0000004	13496622	13497814	1193	3264	889	0.23743872549019607	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	656	34	2944	11	134	56	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13499231-13501215	Cluster_1703	Pocillopora_meandrina_HIv1___Sc0000004	13499231	13501215	1985	4845	1486	0.7797729618163055	.	UUACGAAAUAUCUGAUGGCUGAUC	237	52	4099	39	38	157	460	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13564132-13565479	Cluster_1704	Pocillopora_meandrina_HIv1___Sc0000004	13564132	13565479	1348	31301	2226	0.9925561483658669	+	UUGGAAUGUGUUACUGAAUGCUUGUUACA	2524	395	30364	54	118	208	162	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13565828-13566247	Cluster_1705	Pocillopora_meandrina_HIv1___Sc0000004	13565828	13566247	420	172	74	0.9767441860465116	+	UCUGGUACAUUUCAUAAAUCUGUGGUCUCC	32	6	155	1	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13566431-13567156	Cluster_1706	Pocillopora_meandrina_HIv1___Sc0000004	13566431	13567156	726	764	254	1.0	+	UUUUAUCUUGAGCAUACACUUAUCUACUGU	59	0	722	4	7	23	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13567324-13567893	Cluster_1707	Pocillopora_meandrina_HIv1___Sc0000004	13567324	13567893	570	4103	610	0.6368510845722642	.	UACGUCUGGCCAGCAAUCAACAUCGUC	603	70	3568	71	49	125	220	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13569155-13569583	Cluster_1708	Pocillopora_meandrina_HIv1___Sc0000004	13569155	13569583	429	440	120	0.9727272727272728	+	UGUAGAAUCAAUCUGUUACUAAGACACC	110	1	421	10	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13570374-13570776	Cluster_1709	Pocillopora_meandrina_HIv1___Sc0000004	13570374	13570776	403	172	120	0.8662790697674418	+	UUAUACCUUUGAUUCAUAGCCUUUCUGA	5	2	154	0	3	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13572742-13576254	Cluster_1710	Pocillopora_meandrina_HIv1___Sc0000004	13572742	13576254	3513	12015	2456	0.9747815230961299	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1590	94	11502	40	98	148	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13577716-13578146	Cluster_1711	Pocillopora_meandrina_HIv1___Sc0000004	13577716	13578146	431	283	81	0.9929328621908127	+	UGCUCUUCAUUUUUGUUGUUGGUUGAACAC	99	2	277	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13579375-13579803	Cluster_1712	Pocillopora_meandrina_HIv1___Sc0000004	13579375	13579803	429	204	84	1.0	+	UAAGCUGUGUUUCCUGAUCUGUUAAAUUGC	24	6	194	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13581537-13582766	Cluster_1713	Pocillopora_meandrina_HIv1___Sc0000004	13581537	13582766	1230	1014	376	0.8520710059171598	+	UGCGAUCCAAAGUAGAAGAAAAUUUAUU	64	3	934	6	7	16	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13583661-13584178	Cluster_1714	Pocillopora_meandrina_HIv1___Sc0000004	13583661	13584178	518	5684	370	0.9996481351161154	+	UAUCUUUGCCAGUUCUGACGUACUCGCAC	1002	27	5608	4	10	24	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13587138-13587564	Cluster_1715	Pocillopora_meandrina_HIv1___Sc0000004	13587138	13587564	427	123	44	1.0	+	UGUUAUCACCAGGCCUUGCACGACAUCUGC	38	5	113	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13590586-13591013	Cluster_1716	Pocillopora_meandrina_HIv1___Sc0000004	13590586	13591013	428	222	120	0.9819819819819819	+	UACUGUUUGAAACCGGCUUGUUUACUCA	21	6	210	2	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13591093-13591520	Cluster_1717	Pocillopora_meandrina_HIv1___Sc0000004	13591093	13591520	428	174	68	0.9425287356321839	+	UGCUCGACCUUUGCAACACCAAUUUGUUU	33	7	165	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13592684-13593098	Cluster_1718	Pocillopora_meandrina_HIv1___Sc0000004	13592684	13593098	415	183	100	0.8961748633879781	+	UGAGUAUGUCGCGCUCCGUCCUGACGAAG	28	11	163	5	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13597761-13598295	Cluster_1719	Pocillopora_meandrina_HIv1___Sc0000004	13597761	13598295	535	261	118	1.0	+	UGGACUUUAAACUGCAGAUCUGAUUGUUUC	12	1	231	2	9	16	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13598565-13599175	Cluster_1720	Pocillopora_meandrina_HIv1___Sc0000004	13598565	13599175	611	566	229	0.9964664310954063	+	UUGGAUUUUUGUGUGGUUGAGACCAAGACA	83	8	541	3	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13599546-13600020	Cluster_1721	Pocillopora_meandrina_HIv1___Sc0000004	13599546	13600020	475	362	153	0.9861878453038674	+	UAUGAUCACGUUGUUCCUCUUGGACCUG	23	3	352	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13600817-13601256	Cluster_1722	Pocillopora_meandrina_HIv1___Sc0000004	13600817	13601256	440	382	129	1.0	+	UCCAUUUCCUGUAGCAAAAUUAAGCUGG	50	3	367	1	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13602729-13603149	Cluster_1723	Pocillopora_meandrina_HIv1___Sc0000004	13602729	13603149	421	201	102	1.0	+	UGAAAUCUUGAGGGUCAUGUCUGAUACUG	23	2	194	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13603945-13604530	Cluster_1724	Pocillopora_meandrina_HIv1___Sc0000004	13603945	13604530	586	434	201	1.0	+	UGAAUUCCACAAGUGCCUGUAAGAAGUGGC	24	7	403	5	6	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13605193-13605593	Cluster_1725	Pocillopora_meandrina_HIv1___Sc0000004	13605193	13605593	401	235	107	0.9957446808510638	+	UGAUAUCAAACUGGUGUAAAGACUGGAA	30	4	225	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13606418-13606902	Cluster_1726	Pocillopora_meandrina_HIv1___Sc0000004	13606418	13606902	485	608	159	0.9671052631578947	+	UUAUCAGUAUCUUCAAAGUUUGUCAUCAAG	166	4	597	1	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13608186-13608970	Cluster_1727	Pocillopora_meandrina_HIv1___Sc0000004	13608186	13608970	785	481	217	0.3180873180873181	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	41	26	401	10	20	13	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13613398-13614371	Cluster_1728	Pocillopora_meandrina_HIv1___Sc0000004	13613398	13614371	974	1043	262	0.9712368168744008	+	UAUCGCUAUGAAUAUUUGAAACGUUUUUCAU	110	6	1026	1	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13617159-13617894	Cluster_1729	Pocillopora_meandrina_HIv1___Sc0000004	13617159	13617894	736	405	150	0.9407407407407408	+	UACGUGUAGAAAGCCUUCUCUGACAUC	38	3	378	4	1	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13618974-13619528	Cluster_1730	Pocillopora_meandrina_HIv1___Sc0000004	13618974	13619528	555	610	284	0.8934426229508197	+	UAAUGAAGUCGUAAUUUGUCCAUCC	72	10	565	1	11	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13620022-13620730	Cluster_1731	Pocillopora_meandrina_HIv1___Sc0000004	13620022	13620730	709	11033	594	0.9932928487265477	+	UUAAAGGGGAAGACAAUACAUCUGUGUGA	2201	15	10956	5	4	22	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13621026-13621760	Cluster_1732	Pocillopora_meandrina_HIv1___Sc0000004	13621026	13621760	735	10303	1039	0.9735999223527128	+	UGUGACAGCUCCUUUCCUCUUGCAAAG	914	120	9106	757	113	59	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13634452-13634874	Cluster_1733	Pocillopora_meandrina_HIv1___Sc0000004	13634452	13634874	423	258	151	0.7170542635658915	.	UUUACACCGGCUCUUGUUACCAUUUGG	9	1	251	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13636486-13637031	Cluster_1734	Pocillopora_meandrina_HIv1___Sc0000004	13636486	13637031	546	797	187	0.8971141781681304	+	UUGGAAAAAUCUGCUGUAAUUUGCUGC	252	1	763	2	3	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13638185-13638614	Cluster_1735	Pocillopora_meandrina_HIv1___Sc0000004	13638185	13638614	430	95	29	0.17894736842105263	-	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	48	5	88	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13638673-13639097	Cluster_1736	Pocillopora_meandrina_HIv1___Sc0000004	13638673	13639097	425	245	125	1.0	+	UGCAAUGUUUUUCGGCGUGUUGGGACGGU	17	3	236	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13639479-13639908	Cluster_1737	Pocillopora_meandrina_HIv1___Sc0000004	13639479	13639908	430	392	112	0.9438775510204082	+	UUCGAGCUAUCACUGAAAGAGGGAGUGGU	72	3	361	5	6	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13641818-13642307	Cluster_1738	Pocillopora_meandrina_HIv1___Sc0000004	13641818	13642307	490	717	153	0.8326359832635983	+	UUCUGCUUGCACCGUGACUCUGCAUGGC	102	0	667	3	2	13	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13642615-13644807	Cluster_1739	Pocillopora_meandrina_HIv1___Sc0000004	13642615	13644807	2193	24760	2786	0.9646607431340872	+	UAGCGUAUUACAGAAAAAAGAAAACAGAGU	1375	229	23475	267	120	228	441	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13646345-13646768	Cluster_1740	Pocillopora_meandrina_HIv1___Sc0000004	13646345	13646768	424	182	91	1.0	+	UGUUGUGUUCUUCAUCUGAUGUAUCGUC	20	3	171	0	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13648557-13648986	Cluster_1741	Pocillopora_meandrina_HIv1___Sc0000004	13648557	13648986	430	147	23	1.0	+	UUGACGACUUGUAACUUAAACUUGAAUAUU	101	0	146	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13655263-13655685	Cluster_1742	Pocillopora_meandrina_HIv1___Sc0000004	13655263	13655685	423	153	62	0.9215686274509803	+	UAACACAAUGAACCAAGGCACGUCCAGA	17	1	134	1	2	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13659082-13659505	Cluster_1743	Pocillopora_meandrina_HIv1___Sc0000004	13659082	13659505	424	126	53	0.8650793650793651	+	UACGUGUAGACUGAGCCAUUGCCUAGU	22	1	106	1	0	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13659908-13661080	Cluster_1744	Pocillopora_meandrina_HIv1___Sc0000004	13659908	13661080	1173	1278	432	0.8176838810641628	+	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	80	12	1175	4	7	24	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13664298-13664728	Cluster_1745	Pocillopora_meandrina_HIv1___Sc0000004	13664298	13664728	431	231	50	1.0	+	UUGGAACACUACAAGACUACUGAGCUCUUGU	101	0	231	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13665700-13666634	Cluster_1746	Pocillopora_meandrina_HIv1___Sc0000004	13665700	13666634	935	1731	262	0.9982668977469671	+	UUUGUUGUGUUUUUUGAUCGUGGGCAUC	339	4	1718	0	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13667018-13667446	Cluster_1747	Pocillopora_meandrina_HIv1___Sc0000004	13667018	13667446	429	371	120	0.9919137466307277	+	UGUAACAAAGAAGUACUACUGAUCACAUU	56	3	362	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13668475-13668890	Cluster_1748	Pocillopora_meandrina_HIv1___Sc0000004	13668475	13668890	416	77	36	0.987012987012987	+	UGGAACUUCUCGCUCAUCCACAAUCUAUG	22	1	74	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13669366-13671196	Cluster_1749	Pocillopora_meandrina_HIv1___Sc0000004	13669366	13671196	1831	8902	1493	0.9223769939339475	+	UGUAACUUUGAGCUUCUUUUUUGCAGGA	1416	43	8559	30	44	94	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13673694-13674124	Cluster_1750	Pocillopora_meandrina_HIv1___Sc0000004	13673694	13674124	431	224	90	0.9776785714285714	+	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	44	1	213	0	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13674660-13675102	Cluster_1751	Pocillopora_meandrina_HIv1___Sc0000004	13674660	13675102	443	428	163	0.955607476635514	+	UAAAGUCUGUGUCAUUUUGAAGGAACGUGU	36	0	404	1	4	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13684665-13686075	Cluster_1752	Pocillopora_meandrina_HIv1___Sc0000004	13684665	13686075	1411	2167	777	0.9912321181356715	+	UAAGACAAGUACUUCAAACACUCUCUAGUAG	209	11	2095	9	7	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13686367-13687756	Cluster_1753	Pocillopora_meandrina_HIv1___Sc0000004	13686367	13687756	1390	5447	980	0.994492381127226	+	UUGUAACUGCGAUCGUUCUUUGGAGC	304	16	5107	12	98	126	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13694373-13695079	Cluster_1754	Pocillopora_meandrina_HIv1___Sc0000004	13694373	13695079	707	551	217	0.9745916515426497	+	UAGGCUCGUGUGCACAACAACUGUACAGC	27	2	537	0	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13698678-13699095	Cluster_1755	Pocillopora_meandrina_HIv1___Sc0000004	13698678	13699095	418	216	38	1.0	+	AUCCCACUCCUGACACCA	122	196	19	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13700023-13700732	Cluster_1756	Pocillopora_meandrina_HIv1___Sc0000004	13700023	13700732	710	766	107	1.0	+	UGAAUGCUCGUUGCUCGACUGAUUGUAC	106	2	755	4	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13727111-13727724	Cluster_1757	Pocillopora_meandrina_HIv1___Sc0000004	13727111	13727724	614	701	243	0.7061340941512125	.	UUCGGCAAAAACUAAAAGCGGGCGAAGA	173	7	636	3	1	13	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13999967-14000673	Cluster_1758	Pocillopora_meandrina_HIv1___Sc0000004	13999967	14000673	707	247	86	0.10121457489878542	-	UGAUGCAAUCUGUUUCUGCAUGAGGGC	48	4	221	5	5	12	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14003219-14003636	Cluster_1759	Pocillopora_meandrina_HIv1___Sc0000004	14003219	14003636	418	96	28	0.08333333333333333	-	CGGCCUGAAAAAAAAAAA	48	84	2	4	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14004713-14005502	Cluster_1760	Pocillopora_meandrina_HIv1___Sc0000004	14004713	14005502	790	1778	313	0.9516310461192351	+	UUUGAUAUAAAGGUUGUGGAAAAACAGU	155	12	1701	6	5	29	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14017575-14018003	Cluster_1761	Pocillopora_meandrina_HIv1___Sc0000004	14017575	14018003	429	100	20	0.96	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	47	0	99	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14021015-14021442	Cluster_1762	Pocillopora_meandrina_HIv1___Sc0000004	14021015	14021442	428	105	23	0.21904761904761905	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	52	2	101	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14041691-14042119	Cluster_1763	Pocillopora_meandrina_HIv1___Sc0000004	14041691	14042119	429	115	22	0.0	-	UGAGUUCUACUGUAACGACUGAAUAGACU	44	0	111	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14102640-14104377	Cluster_1764	Pocillopora_meandrina_HIv1___Sc0000004	14102640	14104377	1738	7181	1478	0.030079376131458013	-	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	938	33	6917	13	49	93	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14111149-14111688	Cluster_1765	Pocillopora_meandrina_HIv1___Sc0000004	14111149	14111688	540	723	135	0.9543568464730291	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	233	2	714	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14385956-14386385	Cluster_1766	Pocillopora_meandrina_HIv1___Sc0000004	14385956	14386385	430	1250	49	0.0008	-	GGGGUGGACUGUGUUCCAGAAAAGACUGG	384	22	1075	6	138	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14397905-14398333	Cluster_1767	Pocillopora_meandrina_HIv1___Sc0000004	14397905	14398333	429	135	56	0.9925925925925926	+	UGAAACCGAAGACCUGCUAGUAUUUUUGC	39	4	130	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14404359-14404781	Cluster_1768	Pocillopora_meandrina_HIv1___Sc0000004	14404359	14404781	423	94	26	1.0	+	UACGUCUAAAGGAUCUGAAUAUUCAUCAUC	27	1	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14405011-14406005	Cluster_1769	Pocillopora_meandrina_HIv1___Sc0000004	14405011	14406005	995	1207	551	0.5973487986743994	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	69	19	1048	6	16	40	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14407135-14407748	Cluster_1770	Pocillopora_meandrina_HIv1___Sc0000004	14407135	14407748	614	589	262	0.15110356536502548	-	UUCCUGCACCAUUGCAUGUUAACUUCUGC	72	7	521	3	3	8	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14411244-14411670	Cluster_1771	Pocillopora_meandrina_HIv1___Sc0000004	14411244	14411670	427	237	109	1.0	+	UGCUUUCUUGGUCUAGGGUUACUCACUA	29	4	232	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14426820-14427248	Cluster_1772	Pocillopora_meandrina_HIv1___Sc0000004	14426820	14427248	429	159	46	0.9937106918238994	+	UGUUUACUGGUGACUGAAGGAGAACUGGU	69	3	154	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14428694-14429377	Cluster_1773	Pocillopora_meandrina_HIv1___Sc0000004	14428694	14429377	684	607	210	0.9950576606260296	+	UGUCAGAACUGUCUUCGCUUGUAGAAAC	51	7	588	2	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14456143-14456570	Cluster_1774	Pocillopora_meandrina_HIv1___Sc0000004	14456143	14456570	428	126	34	0.9603174603174603	+	AGAGUACCCCAAAACCGCCUGACUAGUUGC	33	4	107	2	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14459119-14459655	Cluster_1775	Pocillopora_meandrina_HIv1___Sc0000004	14459119	14459655	537	443	142	0.9706546275395034	+	UUUCUCUUCUGAAUGUUGAUUAUAAUAUUUC	44	31	363	20	4	4	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14482156-14482583	Cluster_1776	Pocillopora_meandrina_HIv1___Sc0000004	14482156	14482583	428	203	78	0.009852216748768473	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	33	5	193	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14486814-14487231	Cluster_1777	Pocillopora_meandrina_HIv1___Sc0000004	14486814	14487231	418	87	36	0.9080459770114943	+	GCCGAUCCCAGAAUUUGACGUAAAAUUCA	25	2	82	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14506601-14507019	Cluster_1778	Pocillopora_meandrina_HIv1___Sc0000004	14506601	14507019	419	193	111	0.40414507772020725	.	UGCAAACUCGUCUGUAGACUCUGUACG	22	2	184	1	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14507848-14509088	Cluster_1779	Pocillopora_meandrina_HIv1___Sc0000004	14507848	14509088	1241	14087	1391	0.940654504152765	+	UUUUAACACUCUUGACUGCAUCUUUGC	1898	31	13362	18	28	69	579	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14517602-14518021	Cluster_1780	Pocillopora_meandrina_HIv1___Sc0000004	14517602	14518021	420	173	26	0.0	-	CAUGGGUUGGAUUAGGUCUG	29	110	4	21	27	10	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14519757-14520179	Cluster_1781	Pocillopora_meandrina_HIv1___Sc0000004	14519757	14520179	423	104	52	1.0	+	UAUCGCUUGGCAGUUUCCACACUGACA	14	1	90	1	1	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14564791-14565391	Cluster_1782	Pocillopora_meandrina_HIv1___Sc0000004	14564791	14565391	601	811	416	0.3094944512946979	.	UUAAAAAGACGAGCUCGACG	38	408	38	275	59	26	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14565484-14565919	Cluster_1783	Pocillopora_meandrina_HIv1___Sc0000004	14565484	14565919	436	320	145	0.015625	-	CAAGUGUAGUAUCUGUUCC	36	87	169	1	21	26	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14566036-14566562	Cluster_1784	Pocillopora_meandrina_HIv1___Sc0000004	14566036	14566562	527	46274	1892	0.999848727146994	+	UGGGAAUACCCCGUGUUGUAGGCUU	3906	10702	18718	1959	3400	6748	4747	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14567165-14567723	Cluster_1785	Pocillopora_meandrina_HIv1___Sc0000004	14567165	14567723	559	1963	539	0.003056546102903719	-	CGUUCGCGCUCGUCCCCGC	432	1109	308	210	189	95	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14578808-14579344	Cluster_1786	Pocillopora_meandrina_HIv1___Sc0000004	14578808	14579344	537	17098	1969	0.000760322844777167	-	AAACUGAUUUUUGGAACUGGGCU	535	1814	9625	757	1399	1970	1533	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:31376-31900	Cluster_1787	Pocillopora_meandrina_HIv1___Sc0000005	31376	31900	525	4300	670	0.019302325581395347	-	AUAAGGACGAGAAAAGUCUUCGGACU	476	616	2610	230	169	281	394	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:195163-196690	Cluster_1788	Pocillopora_meandrina_HIv1___Sc0000005	195163	196690	1528	2020	862	0.9613861386138614	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	45	17	1897	9	23	25	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:246548-247012	Cluster_1789	Pocillopora_meandrina_HIv1___Sc0000005	246548	247012	465	670	243	0.0	-	ACGCAUGUCAAAUGAGAAGUAACAAGAC	128	28	480	30	33	28	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:356378-356805	Cluster_1790	Pocillopora_meandrina_HIv1___Sc0000005	356378	356805	428	282	152	0.8829787234042553	+	UAAAUCUCGCGGCUCCAAUGUGAAUGUC	13	4	264	0	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:361158-361859	Cluster_1791	Pocillopora_meandrina_HIv1___Sc0000005	361158	361859	702	304	138	0.05921052631578947	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	36	1	281	0	2	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:363137-363572	Cluster_1792	Pocillopora_meandrina_HIv1___Sc0000005	363137	363572	436	785	232	0.05222929936305733	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	140	6	751	0	2	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:363914-364343	Cluster_1793	Pocillopora_meandrina_HIv1___Sc0000005	363914	364343	430	683	201	0.016105417276720352	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	201	3	667	0	5	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:601572-601666	Cluster_1794	Pocillopora_meandrina_HIv1___Sc0000005	601572	601666	95	129404	404	1.0	+	AAAGAAGUACAAGUGGUAGGG	43823	39949	4	68298	20913	235	5	N	Y	spi-mir-temp-4_Stylophora_pistillata_Liew_et_al._2014_Exact_match_of_nve-miR-2023.;apa-mir-2023_Exaiptasia_pallida_Baumgarten_et_al._2017_miR-2023;_Nve;_Spis;_Adi;Adi-Mir-2023_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2023-3p;_nve-miR-2023-3p;_spi-miR-temp-4;eca-nve-F-miR-2023_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;mse-nve-F-miR-2023_Metridium_senile_Praher_et_al._2021_Transcriptome-level;sca-nve-miR-2023-3p_Scolanthus_callimorphus_Praher_et_al._2021_Transcriptome-level;ami-nve-F-miR-2023-3p_Acropora_millepora_Praher_et_al._2021_NA;epa-nve-F-miR-2023_Exaiptasia_pallida_Praher_et_al._2021_NA;spi-nve-F-miR-2023_Stylophora_pistillata_Praher_et_al._2021_NA;miR-2023_Nematostella_vectensis_Moran_et_al._2014_NA;avi-miR-temp-2023_Anemonia_viridis_Urbarova_et_al._2018_NA
Pocillopora_meandrina_HIv1___Sc0000005:669643-670068	Cluster_1795	Pocillopora_meandrina_HIv1___Sc0000005	669643	670068	426	89	34	0.033707865168539325	-	UUUCUUGAUCAAUUUGUGAAUGUCUGCA	12	3	81	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:677665-678093	Cluster_1796	Pocillopora_meandrina_HIv1___Sc0000005	677665	678093	429	277	76	0.0036101083032490976	-	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	72	2	264	2	8	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:678163-679515	Cluster_1797	Pocillopora_meandrina_HIv1___Sc0000005	678163	679515	1353	3966	593	0.0025214321734745334	-	UGAUUAAAAGUUCUGUUAAAUUAUCUGAU	720	13	3890	12	9	18	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:855676-856093	Cluster_1798	Pocillopora_meandrina_HIv1___Sc0000005	855676	856093	418	157	19	0.9936305732484076	+	CGGCCUGAAAAAAAAAAA	83	133	2	11	8	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:928036-928463	Cluster_1799	Pocillopora_meandrina_HIv1___Sc0000005	928036	928463	428	384	235	0.9947916666666666	+	CAGUAGCUGAACUCUCAUAUGAGCACGU	18	52	221	26	19	31	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1117149-1117569	Cluster_1800	Pocillopora_meandrina_HIv1___Sc0000005	1117149	1117569	421	116	36	0.9310344827586207	+	UUUCGUGCUCUAGCCGCUUCA	60	14	4	83	13	2	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1320566-1320979	Cluster_1801	Pocillopora_meandrina_HIv1___Sc0000005	1320566	1320979	414	254	180	1.0	+	AAACGCGAGUAGGACAAAGUUCU	7	54	126	12	24	15	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1509568-1509998	Cluster_1802	Pocillopora_meandrina_HIv1___Sc0000005	1509568	1509998	431	314	162	0.04777070063694268	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	20	2	294	4	0	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1510014-1510441	Cluster_1803	Pocillopora_meandrina_HIv1___Sc0000005	1510014	1510441	428	241	132	0.11203319502074689	-	UACUGAUAGUGAAACUGCUCCUUGAACC	15	5	226	1	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1513099-1513526	Cluster_1804	Pocillopora_meandrina_HIv1___Sc0000005	1513099	1513526	428	79	24	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	0	77	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1729007-1729479	Cluster_1805	Pocillopora_meandrina_HIv1___Sc0000005	1729007	1729479	473	553	157	0.05786618444846293	-	UCCUAUGGUCGAUGCCUUCUGAGACAGU	68	5	520	3	1	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1897926-1898403	Cluster_1806	Pocillopora_meandrina_HIv1___Sc0000005	1897926	1898403	478	327	208	0.0	-	CCGUGACUGCAGCAGAGU	19	108	135	27	26	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1899461-1900301	Cluster_1807	Pocillopora_meandrina_HIv1___Sc0000005	1899461	1900301	841	545	320	0.0	-	CUCUGGAUCGGAGUGACA	28	175	211	58	39	32	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2281461-2281918	Cluster_1808	Pocillopora_meandrina_HIv1___Sc0000005	2281461	2281918	458	967	163	0.9948293691830403	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	375	31	903	12	5	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2310589-2311019	Cluster_1809	Pocillopora_meandrina_HIv1___Sc0000005	2310589	2311019	431	300	140	0.0	-	GAAUGUCCUUACUACGGUUGCUGAAA	20	71	163	21	17	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2352438-2352863	Cluster_1810	Pocillopora_meandrina_HIv1___Sc0000005	2352438	2352863	426	95	40	0.0	-	UUUUCCUGGGCUCGCAGCUUUCUCUGUU	13	0	91	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2391497-2391925	Cluster_1811	Pocillopora_meandrina_HIv1___Sc0000005	2391497	2391925	429	181	65	0.994475138121547	+	AGGACAAACAAGACCUGAAACGGAAAGGA	44	7	161	2	5	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2579073-2579493	Cluster_1812	Pocillopora_meandrina_HIv1___Sc0000005	2579073	2579493	421	147	74	0.9047619047619048	+	UACGUUCGUCUUGAGACAUCUCUGUCUUG	13	1	137	3	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2776669-2777097	Cluster_1813	Pocillopora_meandrina_HIv1___Sc0000005	2776669	2777097	429	536	72	0.996268656716418	+	AGCCAACGUGACCACAAACAAAGACGAC	137	1	520	2	3	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2785318-2785746	Cluster_1814	Pocillopora_meandrina_HIv1___Sc0000005	2785318	2785746	429	270	108	0.15925925925925927	-	UGUCUUCACGAAUCUGCAGUUGAAAUUUC	67	9	210	7	14	25	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2843759-2844186	Cluster_1815	Pocillopora_meandrina_HIv1___Sc0000005	2843759	2844186	428	513	65	0.9961013645224172	+	AGCCAACGUGACCACAAACAAAGACGAC	139	0	492	10	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2976195-2976612	Cluster_1816	Pocillopora_meandrina_HIv1___Sc0000005	2976195	2976612	418	779	17	1.0	+	CUUAGGGUGCUGUCGGCA	688	779	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3377636-3378055	Cluster_1817	Pocillopora_meandrina_HIv1___Sc0000005	3377636	3378055	420	164	10	1.0	+	CAGCGGAACCUUAGGAUCUG	74	152	0	9	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3564984-3565412	Cluster_1818	Pocillopora_meandrina_HIv1___Sc0000005	3564984	3565412	429	1607	117	0.9831985065339142	+	UACUAAGUAGGUACCUUCGAGAUGUUUA	385	27	1516	2	5	7	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3590785-3593852	Cluster_1819	Pocillopora_meandrina_HIv1___Sc0000005	3590785	3593852	3068	12172	2060	0.03770949720670391	-	UGAGAAUUCUGGAAUUUAUGACAACUCC	726	96	11419	72	181	177	227	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3596796-3597487	Cluster_1820	Pocillopora_meandrina_HIv1___Sc0000005	3596796	3597487	692	593	243	0.0016863406408094434	-	UCUAUUAACUUUUUGGCGUGUCUCUGUAUU	42	13	557	3	3	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3598205-3598779	Cluster_1821	Pocillopora_meandrina_HIv1___Sc0000005	3598205	3598779	575	918	260	0.14923747276688454	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	126	6	869	1	3	20	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3599005-3600832	Cluster_1822	Pocillopora_meandrina_HIv1___Sc0000005	3599005	3600832	1828	3352	860	0.23299522673031026	.	UACUUCGUUAAGCUUCGUGAGAUCCACA	234	37	3057	35	63	49	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3602850-3603277	Cluster_1823	Pocillopora_meandrina_HIv1___Sc0000005	3602850	3603277	428	72	24	0.013888888888888888	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	0	72	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3604130-3604811	Cluster_1824	Pocillopora_meandrina_HIv1___Sc0000005	3604130	3604811	682	296	166	0.0777027027027027	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	35	3	279	3	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3605255-3605666	Cluster_1825	Pocillopora_meandrina_HIv1___Sc0000005	3605255	3605666	412	109	52	0.045871559633027525	-	UAUAACGUAAACUGGUCUCCCUUCGAUUCC	15	3	102	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3607300-3607726	Cluster_1826	Pocillopora_meandrina_HIv1___Sc0000005	3607300	3607726	427	272	124	0.003676470588235294	-	UUCAGCUGAGGCUCUUUCAUCUAAUUGU	23	4	256	0	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3711070-3711552	Cluster_1827	Pocillopora_meandrina_HIv1___Sc0000005	3711070	3711552	483	3629	150	0.9680352714246349	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	1343	8	3606	5	4	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3731078-3731507	Cluster_1828	Pocillopora_meandrina_HIv1___Sc0000005	3731078	3731507	430	181	39	1.0	+	UGACUGGUCAACAAAUGGAAAGCGAAUUGU	100	1	174	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3823463-3824086	Cluster_1829	Pocillopora_meandrina_HIv1___Sc0000005	3823463	3824086	624	378	71	0.08994708994708994	-	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	129	1	352	1	2	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3824912-3825341	Cluster_1830	Pocillopora_meandrina_HIv1___Sc0000005	3824912	3825341	430	554	62	0.9602888086642599	+	AUGUAGAGUGUCUUUAUUAAAUUCAAUAUG	175	35	484	10	1	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3825568-3826032	Cluster_1831	Pocillopora_meandrina_HIv1___Sc0000005	3825568	3826032	465	178	66	0.39325842696629215	.	AAAUCAUGGAGAGGAACUGUUCAUU	30	2	149	11	4	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3880254-3880902	Cluster_1832	Pocillopora_meandrina_HIv1___Sc0000005	3880254	3880902	649	1103	199	0.99909338168631	+	UUUGCAGGAAAUGUAAUUGAAAGGAAACA	202	8	1075	1	2	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3881011-3881439	Cluster_1833	Pocillopora_meandrina_HIv1___Sc0000005	3881011	3881439	429	233	68	0.9785407725321889	+	UCUUCAGUGUUUGUAACUUCUCUUUUUAC	76	2	230	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3896583-3897262	Cluster_1834	Pocillopora_meandrina_HIv1___Sc0000005	3896583	3897262	680	685	206	0.9824817518248176	+	UGUGAAUUUACUGACCAUCUCGACAUUG	62	8	658	2	7	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3925759-3926829	Cluster_1835	Pocillopora_meandrina_HIv1___Sc0000005	3925759	3926829	1071	1659	623	0.7932489451476793	.	UCUAACGCGUUUGUCUGACAUCCCUUU	163	32	1478	8	40	21	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3928754-3929175	Cluster_1836	Pocillopora_meandrina_HIv1___Sc0000005	3928754	3929175	422	170	83	1.0	+	UGUACAAGGUAGAAUUGAAAAUUAAAGACA	12	4	163	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3933852-3934265	Cluster_1837	Pocillopora_meandrina_HIv1___Sc0000005	3933852	3934265	414	128	80	0.984375	+	UGAAACCUUGUCUUUCGACUCGUAUUGUGG	9	3	121	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3935142-3935568	Cluster_1838	Pocillopora_meandrina_HIv1___Sc0000005	3935142	3935568	427	141	53	1.0	+	UCUUUGUGCUCUUCUGGAGGUAUGUUC	23	1	137	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3935694-3938335	Cluster_1839	Pocillopora_meandrina_HIv1___Sc0000005	3935694	3938335	2642	8996	1855	0.9933303690529124	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1249	31	8787	18	32	30	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3938633-3939270	Cluster_1840	Pocillopora_meandrina_HIv1___Sc0000005	3938633	3939270	638	389	150	1.0	+	UUGGCUAUGUGAACUCUCUCUACUUUGGU	16	5	365	0	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3939665-3941351	Cluster_1841	Pocillopora_meandrina_HIv1___Sc0000005	3939665	3941351	1687	3688	950	0.9986442516268981	+	GUCCCGUCGGAGGUGCCA	354	519	3129	10	8	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3942222-3942629	Cluster_1842	Pocillopora_meandrina_HIv1___Sc0000005	3942222	3942629	408	122	81	1.0	+	UGGAAUAGACAAGGACCGAUGAGGGGGC	8	1	115	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3946380-3946949	Cluster_1843	Pocillopora_meandrina_HIv1___Sc0000005	3946380	3946949	570	404	135	0.9975247524752475	+	UCAAGAUCUACUACUGUGUGAAAUAAAGCGU	58	7	387	3	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3947796-3948223	Cluster_1844	Pocillopora_meandrina_HIv1___Sc0000005	3947796	3948223	428	226	92	0.911504424778761	+	UGUAGCAUUCUUUACAAAAGUCUUCAGGA	35	10	213	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3950517-3950941	Cluster_1845	Pocillopora_meandrina_HIv1___Sc0000005	3950517	3950941	425	137	58	1.0	+	UGCAAUGCUUUCGACAUCUGACUUGAUUUC	34	0	135	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3954119-3954996	Cluster_1846	Pocillopora_meandrina_HIv1___Sc0000005	3954119	3954996	878	614	230	1.0	+	UCAUCCUUGAAAACUGUCUUGAUAAGAGC	83	5	596	0	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3960917-3961344	Cluster_1847	Pocillopora_meandrina_HIv1___Sc0000005	3960917	3961344	428	242	97	0.9338842975206612	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	96	1	231	0	3	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3963100-3963785	Cluster_1848	Pocillopora_meandrina_HIv1___Sc0000005	3963100	3963785	686	443	242	0.8216704288939052	+	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	35	3	382	4	6	15	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3963936-3964356	Cluster_1849	Pocillopora_meandrina_HIv1___Sc0000005	3963936	3964356	421	203	148	0.7881773399014779	.	UUUUACCUCCAUCCGGCGAUUGUAACCAAU	11	6	173	1	6	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3964596-3965021	Cluster_1850	Pocillopora_meandrina_HIv1___Sc0000005	3964596	3965021	426	213	88	0.7934272300469484	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	22	3	201	2	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3998294-3998765	Cluster_1851	Pocillopora_meandrina_HIv1___Sc0000005	3998294	3998765	472	521	164	0.7658349328214972	.	UGCUCAUCGUUCGAAUGCUUCUCUGAAGCUU	120	1	477	2	3	5	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4004547-4005640	Cluster_1852	Pocillopora_meandrina_HIv1___Sc0000005	4004547	4005640	1094	8379	1068	0.9750566893424036	+	UGUAUUUCGCUGGAUGGCCCAUUGGUGCCC	611	82	7950	59	28	82	178	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4005675-4007192	Cluster_1853	Pocillopora_meandrina_HIv1___Sc0000005	4005675	4007192	1518	947	519	0.8321013727560718	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	29	47	756	51	32	37	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4007731-4008770	Cluster_1854	Pocillopora_meandrina_HIv1___Sc0000005	4007731	4008770	1040	870	386	0.9586206896551724	+	UAACAUCUCUCUUUCCGACUUUAACAGC	61	3	828	4	4	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4008910-4009338	Cluster_1855	Pocillopora_meandrina_HIv1___Sc0000005	4008910	4009338	429	308	129	0.9383116883116883	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	91	3	291	0	0	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4009354-4009889	Cluster_1856	Pocillopora_meandrina_HIv1___Sc0000005	4009354	4009889	536	761	308	0.9303547963206308	+	UCGAUCUUGAUAUUCUCACUUUGCAGGC	30	8	702	1	15	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4010008-4010931	Cluster_1857	Pocillopora_meandrina_HIv1___Sc0000005	4010008	4010931	924	962	451	0.8440748440748441	+	AAACACAAGGUUGUAUUUAUUCGAAAACUCC	33	17	854	6	13	25	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4023895-4024323	Cluster_1858	Pocillopora_meandrina_HIv1___Sc0000005	4023895	4024323	429	160	68	0.93125	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	24	1	152	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4024433-4025522	Cluster_1859	Pocillopora_meandrina_HIv1___Sc0000005	4024433	4025522	1090	908	429	0.9240088105726872	+	UGUAUCUUCUUAGGCCAGCAUGUGUACUGA	44	4	864	3	5	9	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4025827-4026433	Cluster_1860	Pocillopora_meandrina_HIv1___Sc0000005	4025827	4026433	607	404	168	0.9504950495049505	+	UCCGAUAAGCAUUCGUUCUAAGCGUCCU	31	1	390	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4027822-4028249	Cluster_1861	Pocillopora_meandrina_HIv1___Sc0000005	4027822	4028249	428	142	62	0.028169014084507043	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	30	0	137	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4030391-4030924	Cluster_1862	Pocillopora_meandrina_HIv1___Sc0000005	4030391	4030924	534	598	222	0.0016722408026755853	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	34	4	583	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4031042-4031471	Cluster_1863	Pocillopora_meandrina_HIv1___Sc0000005	4031042	4031471	430	642	137	0.012461059190031152	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	134	0	635	3	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4135453-4136041	Cluster_1864	Pocillopora_meandrina_HIv1___Sc0000005	4135453	4136041	589	952	331	0.6365546218487395	.	UAUUCUCCUUCUCGGUCGACUGAGGUUG	60	27	777	15	23	55	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4273350-4273768	Cluster_1865	Pocillopora_meandrina_HIv1___Sc0000005	4273350	4273768	419	250	171	1.0	+	GUAUAAAGGAGAGGAUAAGACU	14	53	85	16	42	28	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4315139-4315565	Cluster_1866	Pocillopora_meandrina_HIv1___Sc0000005	4315139	4315565	427	200	70	0.4	.	UUGGAACGUGUUGCUGAACGCUUGUUGC	45	5	175	2	4	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4318505-4319208	Cluster_1867	Pocillopora_meandrina_HIv1___Sc0000005	4318505	4319208	704	298	142	0.9463087248322147	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	32	2	283	3	4	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4320438-4320867	Cluster_1868	Pocillopora_meandrina_HIv1___Sc0000005	4320438	4320867	430	217	130	0.7557603686635944	.	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	31	3	187	1	0	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4377759-4378183	Cluster_1869	Pocillopora_meandrina_HIv1___Sc0000005	4377759	4378183	425	208	68	1.0	+	AUGAUGAGCGAUUUAUCUCUGACAUUU	36	39	114	14	14	5	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4402426-4402843	Cluster_1870	Pocillopora_meandrina_HIv1___Sc0000005	4402426	4402843	418	73	6	1.0	+	UUCCCGGCUGAUGCACCA	51	73	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4473566-4473993	Cluster_1871	Pocillopora_meandrina_HIv1___Sc0000005	4473566	4473993	428	187	81	0.016042780748663103	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	28	3	176	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4512272-4512700	Cluster_1872	Pocillopora_meandrina_HIv1___Sc0000005	4512272	4512700	429	1311	82	1.0	+	AAUUGUUAAAUGUAACGGGCGUGCUGUU	407	2	1247	1	8	17	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4525551-4525980	Cluster_1873	Pocillopora_meandrina_HIv1___Sc0000005	4525551	4525980	430	337	34	0.0	-	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	153	0	337	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4527008-4527525	Cluster_1874	Pocillopora_meandrina_HIv1___Sc0000005	4527008	4527525	518	3284	355	0.019183922046285017	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGC	604	51	3005	13	38	26	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4539470-4539906	Cluster_1875	Pocillopora_meandrina_HIv1___Sc0000005	4539470	4539906	437	323	89	0.018575851393188854	-	UGAAUCUUGACAGUUGGGUUUACUUGUGA	65	4	308	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4734279-4734715	Cluster_1876	Pocillopora_meandrina_HIv1___Sc0000005	4734279	4734715	437	241	133	0.3651452282157676	.	UCCAACAAUUCAAACACUACAACUUUCUGA	17	50	153	28	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4903620-4904044	Cluster_1877	Pocillopora_meandrina_HIv1___Sc0000005	4903620	4904044	425	270	15	0.9666666666666667	+	UCGCCAACUUCUAUGAAAUCUGAGU	199	1	252	0	11	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4922758-4923269	Cluster_1878	Pocillopora_meandrina_HIv1___Sc0000005	4922758	4923269	512	2735	227	0.9850091407678245	+	UCUUUCAAAUCUAUUGUGCAGGUCUCGU	656	26	2681	3	0	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4923736-4924309	Cluster_1879	Pocillopora_meandrina_HIv1___Sc0000005	4923736	4924309	574	1537	372	0.5081327260897853	.	UGCUAUUCAUGAAACCCAUUAGCUUGUCGUG	187	11	1388	6	24	20	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4924542-4925210	Cluster_1880	Pocillopora_meandrina_HIv1___Sc0000005	4924542	4925210	669	9988	1088	0.8341009211053264	+	UUCUCUGCAUUGCUCGAUACCCUAGAUA	1494	117	8476	54	265	613	463	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5081968-5082395	Cluster_1881	Pocillopora_meandrina_HIv1___Sc0000005	5081968	5082395	428	109	14	1.0	+	AUGUAGUGAAACUGAUGGCGGAAUUAAAC	43	4	102	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5338814-5339221	Cluster_1882	Pocillopora_meandrina_HIv1___Sc0000005	5338814	5339221	408	116	91	1.0	+	UAGGACUGAUGUGGCCUUGGCUA	3	26	40	10	12	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5359015-5359444	Cluster_1883	Pocillopora_meandrina_HIv1___Sc0000005	5359015	5359444	430	236	130	0.8135593220338984	+	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	16	2	219	1	3	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5418990-5419564	Cluster_1884	Pocillopora_meandrina_HIv1___Sc0000005	5418990	5419564	575	926	270	0.16630669546436286	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	124	4	875	0	5	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5419927-5420338	Cluster_1885	Pocillopora_meandrina_HIv1___Sc0000005	5419927	5420338	412	235	123	0.1276595744680851	-	UGAACUUAACGACACCUAGAUCUGCACAAGC	16	2	209	0	11	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5420641-5421617	Cluster_1886	Pocillopora_meandrina_HIv1___Sc0000005	5420641	5421617	977	1288	282	0.18090062111801242	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	161	4	1221	7	1	15	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5422014-5422690	Cluster_1887	Pocillopora_meandrina_HIv1___Sc0000005	5422014	5422690	677	270	151	0.08888888888888889	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	16	0	251	3	5	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5472880-5473521	Cluster_1888	Pocillopora_meandrina_HIv1___Sc0000005	5472880	5473521	642	438	140	0.8698630136986302	+	UACCGUAGAACUUUCCAGAACAUUUCAUUA	72	17	375	7	8	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5727563-5728047	Cluster_1889	Pocillopora_meandrina_HIv1___Sc0000005	5727563	5728047	485	433	244	0.3648960739030023	.	AUGUUAAACAACAACUGAACAGUCUAAGC	17	73	300	39	9	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5740802-5741275	Cluster_1890	Pocillopora_meandrina_HIv1___Sc0000005	5740802	5741275	474	972	315	1.0	+	AUGCAUUUGUUGAGUUCAGGU	122	166	414	231	74	44	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5741785-5742213	Cluster_1891	Pocillopora_meandrina_HIv1___Sc0000005	5741785	5742213	429	432	187	1.0	+	GAAUGCUAAAUGAACUGAUGAGACGU	33	39	304	14	16	21	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5810484-5811004	Cluster_1892	Pocillopora_meandrina_HIv1___Sc0000005	5810484	5811004	521	4696	1181	0.004045996592844974	-	GAGAACAAUAGAAUGAGU	136	1474	1863	386	379	284	310	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5811618-5812184	Cluster_1893	Pocillopora_meandrina_HIv1___Sc0000005	5811618	5812184	567	71293	4467	0.9999579201324114	+	CGUUCGCGCUCGUCCCCUU	8350	25363	22351	7561	8942	3818	3258	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5842226-5842649	Cluster_1894	Pocillopora_meandrina_HIv1___Sc0000005	5842226	5842649	424	74	15	0.0	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	53	0	74	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5843650-5844069	Cluster_1895	Pocillopora_meandrina_HIv1___Sc0000005	5843650	5844069	420	237	110	0.9957805907172996	+	AACCUUCAACUUUUAUUUUACAAUUU	21	24	120	17	23	25	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5915220-5916129	Cluster_1896	Pocillopora_meandrina_HIv1___Sc0000005	5915220	5916129	910	8153	1027	1.0	+	GUUGGGAUUCUGCAUGUGCUGAGCUA	2166	762	6057	267	337	334	396	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6110602-6111008	Cluster_1897	Pocillopora_meandrina_HIv1___Sc0000005	6110602	6111008	407	137	70	0.10948905109489052	-	UACAGGAUCCAGAAUUGCGGUAGAUGUU	26	3	128	0	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6246291-6247393	Cluster_1898	Pocillopora_meandrina_HIv1___Sc0000005	6246291	6247393	1103	1006	350	0.9145129224652088	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	84	7	945	3	6	25	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6264905-6265315	Cluster_1899	Pocillopora_meandrina_HIv1___Sc0000005	6264905	6265315	411	326	207	0.7914110429447853	.	UCUUUCAGUCACUUAGAAGCCUCCAGG	10	2	269	1	6	24	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6265385-6266062	Cluster_1900	Pocillopora_meandrina_HIv1___Sc0000005	6265385	6266062	678	8194	540	0.9960947034415426	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2283	12	8072	2	36	32	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6355960-6356378	Cluster_1901	Pocillopora_meandrina_HIv1___Sc0000005	6355960	6356378	419	204	35	0.0	-	GUGUGUGUGUCUCUCUGU	82	186	2	15	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6605546-6605973	Cluster_1902	Pocillopora_meandrina_HIv1___Sc0000005	6605546	6605973	428	202	73	0.9851485148514851	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	37	1	188	0	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6891562-6891988	Cluster_1903	Pocillopora_meandrina_HIv1___Sc0000005	6891562	6891988	427	172	55	1.0	+	ACAGAUCGGAUCACAGAUCAUGUGAGC	39	29	138	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7006922-7007710	Cluster_1904	Pocillopora_meandrina_HIv1___Sc0000005	7006922	7007710	789	708	294	0.9364406779661016	+	UCGAAACCCGUAAUCUAAAGUGAACAUCUU	28	4	673	7	2	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7007995-7008971	Cluster_1905	Pocillopora_meandrina_HIv1___Sc0000005	7007995	7008971	977	1182	280	0.9204737732656514	+	UUAACUCCGAUCCGAUGACCUAGAAAGU	153	10	1131	1	4	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7009057-7009686	Cluster_1906	Pocillopora_meandrina_HIv1___Sc0000005	7009057	7009686	630	876	372	0.7442922374429224	.	UGCUCGAUCUUAAUCUUAUAUUCUCCUU	69	40	720	14	55	8	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7010048-7010622	Cluster_1907	Pocillopora_meandrina_HIv1___Sc0000005	7010048	7010622	575	935	282	0.839572192513369	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	140	8	875	2	1	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7172756-7173694	Cluster_1908	Pocillopora_meandrina_HIv1___Sc0000005	7172756	7173694	939	1366	362	0.03953147877013177	-	UGUUAAGUGCACUCUUCGUCUUGUUGAA	122	11	1324	9	5	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7174561-7174987	Cluster_1909	Pocillopora_meandrina_HIv1___Sc0000005	7174561	7174987	427	167	90	0.1437125748502994	-	UCAGACUAGCAACAUGAUCUUCGGUGA	18	0	152	1	1	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7175000-7175423	Cluster_1910	Pocillopora_meandrina_HIv1___Sc0000005	7175000	7175423	424	201	94	0.01990049751243781	-	UCAAAAGCUGCCGAUAAAUCUAAA	44	0	145	1	2	2	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7179152-7179833	Cluster_1911	Pocillopora_meandrina_HIv1___Sc0000005	7179152	7179833	682	271	125	0.9040590405904059	+	UGACAUGUCGAAACCCGUAAUCUAAAGU	29	0	255	3	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7180225-7181201	Cluster_1912	Pocillopora_meandrina_HIv1___Sc0000005	7180225	7181201	977	1251	316	0.9144684252597922	+	UUAACUCCGAUCCGAUGACCUAGAAAGU	150	19	1190	2	7	5	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7181504-7181920	Cluster_1913	Pocillopora_meandrina_HIv1___Sc0000005	7181504	7181920	417	248	129	0.8467741935483871	+	UGUGCACCGUUCUAUAACAUCUAGCUCGAU	11	6	208	4	6	3	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7182278-7182852	Cluster_1914	Pocillopora_meandrina_HIv1___Sc0000005	7182278	7182852	575	937	260	0.8324439701173959	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	134	6	887	2	4	15	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7300681-7301101	Cluster_1915	Pocillopora_meandrina_HIv1___Sc0000005	7300681	7301101	421	90	52	0.9888888888888889	+	AUUGGGAAAACGAGAACAGCGUGAAUGUU	13	2	76	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7308195-7308662	Cluster_1916	Pocillopora_meandrina_HIv1___Sc0000005	7308195	7308662	468	397	146	0.005037783375314861	-	UACAAAGCUCUCACGAAUUCACAAACAGA	47	2	391	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7309081-7310229	Cluster_1917	Pocillopora_meandrina_HIv1___Sc0000005	7309081	7310229	1149	1405	547	0.0099644128113879	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	91	7	1355	3	8	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7310337-7311209	Cluster_1918	Pocillopora_meandrina_HIv1___Sc0000005	7310337	7311209	873	883	386	0.013590033975084938	-	UGCUGAAACGAUUUUGACAGGUUGUCA	54	12	828	4	12	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7311622-7312074	Cluster_1919	Pocillopora_meandrina_HIv1___Sc0000005	7311622	7312074	453	917	304	0.0054525627044711015	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	113	6	903	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7971124-7972081	Cluster_1920	Pocillopora_meandrina_HIv1___Sc0000005	7971124	7972081	958	1233	153	0.12165450121654502	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	408	33	1166	2	1	16	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8311363-8311780	Cluster_1921	Pocillopora_meandrina_HIv1___Sc0000005	8311363	8311780	418	224	156	1.0	+	UUCGCUGGCAAGCAACUCGAAGACGGCC	7	51	112	16	17	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8311939-8312361	Cluster_1922	Pocillopora_meandrina_HIv1___Sc0000005	8311939	8312361	423	302	228	0.9966887417218543	+	UGAAGUAGAGCCCAGCGACU	7	83	123	20	25	24	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8312572-8312985	Cluster_1923	Pocillopora_meandrina_HIv1___Sc0000005	8312572	8312985	414	252	186	1.0	+	UCUUCAUUUGGUGUUGCGUCUGAGA	8	39	120	18	28	26	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8456348-8456887	Cluster_1924	Pocillopora_meandrina_HIv1___Sc0000005	8456348	8456887	540	2514	374	0.0	-	GGUUAUAGGACAAUGCUACAUUC	765	474	785	64	93	948	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9057453-9058049	Cluster_1925	Pocillopora_meandrina_HIv1___Sc0000005	9057453	9058049	597	5524	495	0.996017378711079	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	812	16	5456	4	10	7	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9285829-9286337	Cluster_1926	Pocillopora_meandrina_HIv1___Sc0000005	9285829	9286337	509	615	257	0.26178861788617885	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	85	9	559	6	5	12	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9287286-9288359	Cluster_1927	Pocillopora_meandrina_HIv1___Sc0000005	9287286	9288359	1074	2616	799	0.22591743119266056	.	UUAUUGCCGAACUGAAUGCUGCUC	125	35	2120	17	65	58	321	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9609413-9609842	Cluster_1928	Pocillopora_meandrina_HIv1___Sc0000005	9609413	9609842	430	347	56	1.0	+	UCUUGAAUCACGGUGCUUUUGGAUGUGUC	109	7	336	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10117919-10118346	Cluster_1929	Pocillopora_meandrina_HIv1___Sc0000005	10117919	10118346	428	111	37	1.0	+	UGAGUUGGUAAAAUCUGUUCAGACAUCACA	49	13	87	2	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10301510-10301943	Cluster_1930	Pocillopora_meandrina_HIv1___Sc0000005	10301510	10301943	434	243	71	0.2345679012345679	.	AAGUCAUGAAGGUCAUCGGAAACCCCGA	50	0	243	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10303106-10303644	Cluster_1931	Pocillopora_meandrina_HIv1___Sc0000005	10303106	10303644	539	394	133	0.25888324873096447	.	UGUAACUUUGAGCUUCUUUUUUGCAGGA	115	5	374	0	3	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10337706-10338123	Cluster_1932	Pocillopora_meandrina_HIv1___Sc0000005	10337706	10338123	418	102	7	1.0	+	UCGAACUCGACCCUGUUU	93	101	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10385497-10385597	Cluster_1933	Pocillopora_meandrina_HIv1___Sc0000005	10385497	10385597	101	58190	312	0.9999828149166523	+	UCAGGGAUUGUGGUGAGUUAGUU	21926	10279	126	1422	10174	32234	3955	23	Y	spi-mir-temp-3_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000005:10461461-10461961	Cluster_1934	Pocillopora_meandrina_HIv1___Sc0000005	10461461	10461961	501	361	263	0.997229916897507	+	CACUGUGGCAACCAGUGAACGACUGCA	5	73	143	35	27	40	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10543052-10543519	Cluster_1935	Pocillopora_meandrina_HIv1___Sc0000005	10543052	10543519	468	1681	511	0.9970255800118977	+	CUCCUGAUGUGGAACGGCU	219	1022	254	175	102	78	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10602442-10602865	Cluster_1936	Pocillopora_meandrina_HIv1___Sc0000005	10602442	10602865	424	135	32	0.37777777777777777	.	UUAUACCGAAUCUGCCGUUAAGU	31	8	4	1	12	44	66	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10816891-10817313	Cluster_1937	Pocillopora_meandrina_HIv1___Sc0000005	10816891	10817313	423	507	63	0.0	-	UGGCAUAAGGGCAGCCACCCCUU	218	43	4	14	12	398	36	23	N	spi-mir-temp-29_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000005:10822550-10822977	Cluster_1938	Pocillopora_meandrina_HIv1___Sc0000005	10822550	10822977	428	907	89	1.0	+	AAUUUUGGCAUCUGAGAGUC	123	360	368	42	54	53	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10823796-10824278	Cluster_1939	Pocillopora_meandrina_HIv1___Sc0000005	10823796	10824278	483	3838	577	1.0	+	UCUCUGUGAUGAAACAUCU	272	1408	1139	337	319	308	327	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10832517-10832947	Cluster_1940	Pocillopora_meandrina_HIv1___Sc0000005	10832517	10832947	431	1604	292	1.0	+	CAGCUUGGCUGAAGUCUGAUGCACA	232	176	571	132	126	289	310	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10833535-10833970	Cluster_1941	Pocillopora_meandrina_HIv1___Sc0000005	10833535	10833970	436	420	192	1.0	+	GUUGAUCACAAACUCAGCUUGGCU	23	119	133	55	32	28	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10841147-10841565	Cluster_1942	Pocillopora_meandrina_HIv1___Sc0000005	10841147	10841565	419	153	104	0.8169934640522876	+	UAUUGCUGAACAGACGCACG	15	69	36	15	22	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10909091-10909513	Cluster_1943	Pocillopora_meandrina_HIv1___Sc0000005	10909091	10909513	423	445	60	0.9932584269662922	+	UACUGCUAUUCUUCUUCAGGC	98	28	14	133	127	133	10	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11109435-11110601	Cluster_1944	Pocillopora_meandrina_HIv1___Sc0000005	11109435	11110601	1167	1312	530	0.11280487804878049	-	UACAAUAACCUCUGAUUUCACUAAAUG	63	10	1223	10	13	21	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11110702-11111315	Cluster_1945	Pocillopora_meandrina_HIv1___Sc0000005	11110702	11111315	614	945	428	0.2571428571428571	.	UAAGUUCUCGUGGUUCCCUUUCAAGAUG	27	25	799	9	16	45	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11111466-11112715	Cluster_1946	Pocillopora_meandrina_HIv1___Sc0000005	11111466	11112715	1250	1548	698	0.10981912144702842	-	UGAUCAGAUUCGUAACAGGCAAAGCAUA	68	45	1404	5	20	19	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11112920-11115327	Cluster_1947	Pocillopora_meandrina_HIv1___Sc0000005	11112920	11115327	2408	4203	1324	0.06590530573399953	-	UGUACAACCAUCCGAUACUCUUGU	655	27	2979	20	27	76	1074	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11115604-11116088	Cluster_1948	Pocillopora_meandrina_HIv1___Sc0000005	11115604	11116088	485	356	214	0.16573033707865167	-	UGAUUCCGCGCUUAUGACUCGUCCCAUC	23	2	320	2	4	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11116245-11116697	Cluster_1949	Pocillopora_meandrina_HIv1___Sc0000005	11116245	11116697	453	254	91	0.031496062992125984	-	UGAACACGCGUACUUGUAAUUAUGAAAUG	45	5	243	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11256775-11257254	Cluster_1950	Pocillopora_meandrina_HIv1___Sc0000005	11256775	11257254	480	604	176	0.956953642384106	+	UUAUAAGGAUCUCAAGGCGAAUAAAGCA	92	37	510	15	12	5	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11260734-11260823	Cluster_1951	Pocillopora_meandrina_HIv1___Sc0000005	11260734	11260823	90	30978	390	1.0	+	UCAGGUUAGGAGCAUGGUAUAGA	11353	11063	138	1180	4480	13443	674	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000005:11261356-11261449	Cluster_1952	Pocillopora_meandrina_HIv1___Sc0000005	11261356	11261449	94	11342	285	1.0	+	UAUGCCAGGUCCUAACUUGAAA	3074	2515	37	1892	4102	2298	498	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000005:11307792-11308261	Cluster_1953	Pocillopora_meandrina_HIv1___Sc0000005	11307792	11308261	470	3860	478	0.002072538860103627	-	GAAGUGUUGAUGUUGGAAUUUAUGAAGGCU	282	232	2352	141	566	436	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11345749-11346169	Cluster_1954	Pocillopora_meandrina_HIv1___Sc0000005	11345749	11346169	421	81	19	0.024691358024691357	-	AACGGUCAAAAAAAAAAAAAAAAA	12	5	34	10	8	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11426379-11426796	Cluster_1955	Pocillopora_meandrina_HIv1___Sc0000005	11426379	11426796	418	69	5	0.0	-	AUUGUUUUUCAUUUGUUGA	59	68	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11485270-11485687	Cluster_1956	Pocillopora_meandrina_HIv1___Sc0000005	11485270	11485687	418	160	124	0.0	-	GAGGAGCGAGACAGAAGACU	6	45	55	18	18	19	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11518650-11519090	Cluster_1957	Pocillopora_meandrina_HIv1___Sc0000005	11518650	11519090	441	280	135	0.0	-	UUUCCGCUUAUUAUCUGAUGAU	18	69	52	40	49	33	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11520400-11520873	Cluster_1958	Pocillopora_meandrina_HIv1___Sc0000005	11520400	11520873	474	239	104	0.0041841004184100415	-	ACCAAGUGAUGAGUUUGAAU	17	107	57	40	18	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11564511-11564936	Cluster_1959	Pocillopora_meandrina_HIv1___Sc0000005	11564511	11564936	426	118	59	1.0	+	UAUUUUUAAUCUCUUGCAUACCCUGUUGG	16	1	117	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11883963-11884509	Cluster_1960	Pocillopora_meandrina_HIv1___Sc0000005	11883963	11884509	547	433	151	1.0	+	UAGCAUUCCAUGUGUACAGUUGACUUUUGAA	51	35	324	14	9	29	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11901631-11902058	Cluster_1961	Pocillopora_meandrina_HIv1___Sc0000005	11901631	11902058	428	94	26	1.0	+	CCAGAGGAAAAGAAACAACAUGCCACAGA	23	1	88	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12166117-12166538	Cluster_1962	Pocillopora_meandrina_HIv1___Sc0000005	12166117	12166538	422	188	139	0.9627659574468085	+	UGAGGUGGGCAAGCGUACUUCG	8	68	49	15	26	20	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12169311-12169764	Cluster_1963	Pocillopora_meandrina_HIv1___Sc0000005	12169311	12169764	454	245	191	1.0	+	GAAAGAGAUUGACGAGGCU	7	54	125	21	15	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12170232-12172359	Cluster_1964	Pocillopora_meandrina_HIv1___Sc0000005	12170232	12172359	2128	3277	2093	0.9993896856881294	+	GCUUGCAGCGUGGAUAAGAGCU	25	958	1105	322	326	294	272	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12416089-12416514	Cluster_1965	Pocillopora_meandrina_HIv1___Sc0000005	12416089	12416514	426	168	59	0.9940476190476191	+	UUUGAUUGACGUACGGUAUUUGAGACGC	26	3	153	2	1	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12421588-12422017	Cluster_1966	Pocillopora_meandrina_HIv1___Sc0000005	12421588	12422017	430	188	31	0.9095744680851063	+	CAAUGUCUUAGUAGAAAAACGUACACCUGU	70	1	172	3	7	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12614499-12617140	Cluster_1967	Pocillopora_meandrina_HIv1___Sc0000005	12614499	12617140	2642	8992	1844	0.005782918149466192	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1315	21	8819	22	26	27	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12632974-12633473	Cluster_1968	Pocillopora_meandrina_HIv1___Sc0000005	12632974	12633473	500	749	261	1.0	+	GCAGUGUUAGCAAGGUGGGCUGAGGGAA	82	249	305	53	37	38	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12689818-12690306	Cluster_1969	Pocillopora_meandrina_HIv1___Sc0000005	12689818	12690306	489	6409	1214	0.9861132782025277	+	AACUCUGGUUUUCCUUCAACACGCA	236	1318	3365	447	477	399	403	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12718037-12718462	Cluster_1970	Pocillopora_meandrina_HIv1___Sc0000005	12718037	12718462	426	176	53	0.0	-	AUGCAGUCUUACUCUUCUUGUCAACA	62	9	124	10	21	11	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12879314-12879727	Cluster_1971	Pocillopora_meandrina_HIv1___Sc0000005	12879314	12879727	414	122	91	1.0	+	CCAAGCAGAAUUGUCUGGAGAACAGUGAGA	5	9	65	10	12	15	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12880229-12880653	Cluster_1972	Pocillopora_meandrina_HIv1___Sc0000005	12880229	12880653	425	201	112	1.0	+	GUACUGUGUGCUUGGUAGACUGUCC	16	53	78	15	17	22	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12881759-12882203	Cluster_1973	Pocillopora_meandrina_HIv1___Sc0000005	12881759	12882203	445	259	156	0.9961389961389961	+	CUAAUGUGACCAUCUUGAGACA	9	76	78	25	35	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12952939-12953368	Cluster_1974	Pocillopora_meandrina_HIv1___Sc0000005	12952939	12953368	430	88	26	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	0	88	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12980349-12980834	Cluster_1975	Pocillopora_meandrina_HIv1___Sc0000005	12980349	12980834	486	1964	229	1.0	+	ACUUGAUGGUGAAAGUCUCUUUUUCUGAUU	659	82	1716	14	26	42	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13075382-13076127	Cluster_1976	Pocillopora_meandrina_HIv1___Sc0000005	13075382	13076127	746	231	90	0.645021645021645	.	UCAAAUCGCUCUCGACCGUACACUUU	23	13	199	4	0	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13249316-13249743	Cluster_1977	Pocillopora_meandrina_HIv1___Sc0000005	13249316	13249743	428	132	36	0.0	-	UGCUCAAUGUCCAGGACUCUCUCUGAGU	25	2	129	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13301595-13302016	Cluster_1978	Pocillopora_meandrina_HIv1___Sc0000005	13301595	13302016	422	227	17	0.0	-	UGAAGAUCUUUGCUCUGAAGU	111	31	0	115	54	26	1	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13318059-13318545	Cluster_1979	Pocillopora_meandrina_HIv1___Sc0000005	13318059	13318545	487	6060	625	0.0	-	UGAUGUUGAUUGUCUCUUUCUGAUUCCA	959	382	3517	522	255	317	1067	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13760603-13761092	Cluster_1980	Pocillopora_meandrina_HIv1___Sc0000005	13760603	13761092	490	1841	434	1.0	+	UGGAAUGAUGGAUUCAUACUGAUAUUAUUG	82	261	1000	84	125	159	212	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13781493-13781939	Cluster_1981	Pocillopora_meandrina_HIv1___Sc0000005	13781493	13781939	447	687	82	0.34643377001455605	.	UCGUUUAGAUCAGAGAUCACCUCAACU	233	2	673	2	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13806355-13806772	Cluster_1982	Pocillopora_meandrina_HIv1___Sc0000005	13806355	13806772	418	202	17	0.0049504950495049506	-	AUCCCACUUCUGACACCA	155	201	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13832594-13833012	Cluster_1983	Pocillopora_meandrina_HIv1___Sc0000005	13832594	13833012	419	7279	35	0.9993130924577552	+	AACUUUUGACGGUGGAUCA	7130	7272	6	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:109760-110162	Cluster_1984	Pocillopora_meandrina_HIv1___Sc0000006	109760	110162	403	208	134	0.11057692307692307	-	UAGAGACUUUAAGUACUGGAAAUACUUA	13	3	178	7	4	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:110499-111625	Cluster_1985	Pocillopora_meandrina_HIv1___Sc0000006	110499	111625	1127	3399	694	0.147396293027361	-	UCCUUUCCAAUCUGUUAAUGUUUCUAGC	927	63	3121	14	14	33	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:119716-120119	Cluster_1986	Pocillopora_meandrina_HIv1___Sc0000006	119716	120119	404	194	85	0.32989690721649484	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	21	0	181	0	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:149398-149826	Cluster_1987	Pocillopora_meandrina_HIv1___Sc0000006	149398	149826	429	502	72	0.0199203187250996	-	AGGUAUAGGUUACUCAAGAUUAAUUGAU	251	2	495	2	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:471610-472156	Cluster_1988	Pocillopora_meandrina_HIv1___Sc0000006	471610	472156	547	1190	408	0.45630252100840335	.	AACACUACUACCGUGAGACUGAAG	83	21	889	16	33	71	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:475227-475648	Cluster_1989	Pocillopora_meandrina_HIv1___Sc0000006	475227	475648	422	211	128	0.04265402843601896	-	UGCGUCUUGGUCUUGAUGGUGAGCAUAG	8	13	183	3	5	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:484472-484900	Cluster_1990	Pocillopora_meandrina_HIv1___Sc0000006	484472	484900	429	161	69	0.0	-	UUCUGUAGCAGCCGAUGUCCUGGGAGAUGG	25	0	152	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:490458-490892	Cluster_1991	Pocillopora_meandrina_HIv1___Sc0000006	490458	490892	435	179	48	0.0	-	UCAAAGAACUCUUUCGACUGCUCAUGGGC	70	7	169	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:495473-496305	Cluster_1992	Pocillopora_meandrina_HIv1___Sc0000006	495473	496305	833	577	232	0.9480069324090121	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	48	1	556	3	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:497239-497707	Cluster_1993	Pocillopora_meandrina_HIv1___Sc0000006	497239	497707	469	724	279	0.13259668508287292	-	UGUAUACCAAAUGAUGACUCAAGUCGACGU	103	10	656	2	9	11	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:497822-498249	Cluster_1994	Pocillopora_meandrina_HIv1___Sc0000006	497822	498249	428	212	113	0.25	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	9	2	198	0	1	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:499995-500445	Cluster_1995	Pocillopora_meandrina_HIv1___Sc0000006	499995	500445	451	431	94	0.018561484918793503	-	UCUAGAUGGAUAUACUCGGAUAACUUACU	113	4	416	3	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:503729-504277	Cluster_1996	Pocillopora_meandrina_HIv1___Sc0000006	503729	504277	549	1168	182	0.0017123287671232876	-	UGAUUGAGUCAAAGACAAUGUGGGAGUUA	226	2	1124	7	7	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:506791-507628	Cluster_1997	Pocillopora_meandrina_HIv1___Sc0000006	506791	507628	838	1002	344	0.04091816367265469	-	UAAUGACUUCAGAGUAGACAGAGACGGU	81	6	969	8	4	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:507698-508124	Cluster_1998	Pocillopora_meandrina_HIv1___Sc0000006	507698	508124	427	343	101	0.05539358600583091	-	UGUACAAGGUCGAAAGAAUCCAGGAUA	160	2	321	2	0	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:508498-508924	Cluster_1999	Pocillopora_meandrina_HIv1___Sc0000006	508498	508924	427	180	103	0.15555555555555556	-	UCAGACUAGCAACAUGAUCUUCGGUGA	21	3	164	3	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:508937-509360	Cluster_2000	Pocillopora_meandrina_HIv1___Sc0000006	508937	509360	424	194	96	0.04639175257731959	-	UCAAAAGCUGCCGAUAAAUCUAAA	30	1	146	1	3	2	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:513018-513961	Cluster_2001	Pocillopora_meandrina_HIv1___Sc0000006	513018	513961	944	43975	649	2.274019329164298e-05	-	UUCAAUGUGAAAAGUCUACUUAGGAUGAGU	27579	11	43914	5	9	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:517129-517559	Cluster_2002	Pocillopora_meandrina_HIv1___Sc0000006	517129	517559	431	479	98	0.0	-	UUGAACGUCACUGUCUAUAAGCAAUGCAA	43	2	446	2	8	14	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:520034-520463	Cluster_2003	Pocillopora_meandrina_HIv1___Sc0000006	520034	520463	430	230	88	0.013043478260869565	-	UGGAAACUAUCGUAUGAAAAGAAAUCAAAGU	47	1	226	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:521145-521556	Cluster_2004	Pocillopora_meandrina_HIv1___Sc0000006	521145	521556	412	117	50	0.0	-	UGAUCGACUGUAUGAAAGCUUUAAGAUGGU	34	7	98	2	1	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:523336-524100	Cluster_2005	Pocillopora_meandrina_HIv1___Sc0000006	523336	524100	765	365	183	0.0	-	UGAGAAGAUCUUUUAUUCGUCGCGGCCAUU	53	2	345	2	10	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:524628-525055	Cluster_2006	Pocillopora_meandrina_HIv1___Sc0000006	524628	525055	428	308	111	0.0	-	UGGGUGUAGUGCUGAAUACUGCAGCAUU	86	6	294	0	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:525188-525606	Cluster_2007	Pocillopora_meandrina_HIv1___Sc0000006	525188	525606	419	215	110	0.0	-	UAAGUUACACUGAUUUAACUCCUUUACAAG	15	3	206	0	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:525830-526840	Cluster_2008	Pocillopora_meandrina_HIv1___Sc0000006	525830	526840	1011	633	303	0.0	-	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	44	5	608	3	5	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:526964-528351	Cluster_2009	Pocillopora_meandrina_HIv1___Sc0000006	526964	528351	1388	5567	1007	0.006825938566552901	-	UUGUAACUGCGAUCGUUCUUUGGAGC	314	18	5188	14	117	142	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:528645-530055	Cluster_2010	Pocillopora_meandrina_HIv1___Sc0000006	528645	530055	1411	1998	721	0.012512512512512513	-	UAAGACAAGUACUUCAAACACUCUCUAGUAG	196	8	1927	3	13	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:531712-532132	Cluster_2011	Pocillopora_meandrina_HIv1___Sc0000006	531712	532132	421	98	46	0.0	-	UUUUAAAAUAAGACUCUCGGAAAUGCGUU	14	1	95	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:537373-537912	Cluster_2012	Pocillopora_meandrina_HIv1___Sc0000006	537373	537912	540	3138	297	0.008604206500956023	-	UGAUUGAGUCAAAGACAAUGUGGGAGUU	1189	3	3042	2	9	10	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:540448-540877	Cluster_2013	Pocillopora_meandrina_HIv1___Sc0000006	540448	540877	430	212	86	0.0	-	UGGUGUCGCUGUAGCAUUAUACAUGUUUAC	52	5	205	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:542720-543129	Cluster_2014	Pocillopora_meandrina_HIv1___Sc0000006	542720	543129	410	150	70	0.0	-	UACUAGUCUGUGACCUUAUUUGAAUUUGUA	23	3	147	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:543292-543722	Cluster_2015	Pocillopora_meandrina_HIv1___Sc0000006	543292	543722	431	249	84	0.004016064257028112	-	UUUACAGGGAUUUGGAAACAAAAAUUACAUC	96	13	232	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:544209-544636	Cluster_2016	Pocillopora_meandrina_HIv1___Sc0000006	544209	544636	428	94	33	0.0	-	UUUGACCAAUGCUAGAAGUAAAUAACCGCU	30	0	92	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:547215-547644	Cluster_2017	Pocillopora_meandrina_HIv1___Sc0000006	547215	547644	430	488	133	0.0	-	UUGAACGUCACUGUCUAUAAGCAAUGC	42	3	465	0	3	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:552241-552653	Cluster_2018	Pocillopora_meandrina_HIv1___Sc0000006	552241	552653	413	128	51	0.0	-	UGUUUAUCCCAACUGUAAUAACGCAAGUAAC	29	4	120	0	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:553903-554332	Cluster_2019	Pocillopora_meandrina_HIv1___Sc0000006	553903	554332	430	572	112	0.0	-	UUUUCCAGAAAGACCAUUAACACUUAGAUU	185	1	567	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:554894-555325	Cluster_2020	Pocillopora_meandrina_HIv1___Sc0000006	554894	555325	432	762	155	0.0	-	UUUGAAACCCCGAUUCAGUUGGACAAAACU	295	20	732	0	1	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:560719-561285	Cluster_2021	Pocillopora_meandrina_HIv1___Sc0000006	560719	561285	567	607	170	0.016474464579901153	-	UAAGAACUAACUGGUGUGAGGUGCUAUU	190	7	586	1	3	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:561704-562132	Cluster_2022	Pocillopora_meandrina_HIv1___Sc0000006	561704	562132	429	183	114	0.01092896174863388	-	UUCAUUUCUUGGACUACCGACUGGACCAUG	8	0	179	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:566406-566836	Cluster_2023	Pocillopora_meandrina_HIv1___Sc0000006	566406	566836	431	477	70	0.0041928721174004195	-	UUUCUGCACUUAUUGGCAAUCUUUUGCUGGA	82	4	466	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:567086-567762	Cluster_2024	Pocillopora_meandrina_HIv1___Sc0000006	567086	567762	677	391	130	0.005115089514066497	-	UGACAUGCAGGUAUACAAUGAAAGCAAGA	41	7	377	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:567799-568217	Cluster_2025	Pocillopora_meandrina_HIv1___Sc0000006	567799	568217	419	243	82	0.0	-	UGAGAUGCUUGGUAAUUAUAGGUUCGG	42	11	218	3	1	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:568764-569364	Cluster_2026	Pocillopora_meandrina_HIv1___Sc0000006	568764	569364	601	380	140	0.002631578947368421	-	UGAGAAUUCACAGCUCUGAUAUAGAAGAUA	35	10	362	2	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:664078-664505	Cluster_2027	Pocillopora_meandrina_HIv1___Sc0000006	664078	664505	428	187	112	0.9144385026737968	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUG	20	1	182	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:743223-743711	Cluster_2028	Pocillopora_meandrina_HIv1___Sc0000006	743223	743711	489	1052	257	0.8545627376425855	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	122	9	925	5	13	63	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:790840-791737	Cluster_2029	Pocillopora_meandrina_HIv1___Sc0000006	790840	791737	898	586	251	0.5	.	UAUUCUUAUCAUCUGCGUUUGGUCUACUGC	36	8	522	3	3	17	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:958695-959122	Cluster_2030	Pocillopora_meandrina_HIv1___Sc0000006	958695	959122	428	395	143	0.1670886075949367	-	UUGGAACGUGUUGCUGAACGCUUGCU	38	17	340	4	14	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1012623-1013052	Cluster_2031	Pocillopora_meandrina_HIv1___Sc0000006	1012623	1013052	430	303	66	0.006600660066006601	-	AGUUGACAUAUUGACUGGUACGAACAAGGG	44	3	290	1	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1058984-1059413	Cluster_2032	Pocillopora_meandrina_HIv1___Sc0000006	1058984	1059413	430	382	69	0.8952879581151832	+	UCAUUUCUUCUACAGACACUGGAUACCAGA	104	7	317	6	2	17	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1068382-1068820	Cluster_2033	Pocillopora_meandrina_HIv1___Sc0000006	1068382	1068820	439	247	133	0.6518218623481782	.	UCAUACGGCUUCUUGAAUUUAUCCAGU	20	11	211	4	5	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1070154-1070581	Cluster_2034	Pocillopora_meandrina_HIv1___Sc0000006	1070154	1070581	428	106	14	0.9716981132075472	+	UACCAAGGUCUUGUAGUCUAGUACAACU	60	0	106	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1102308-1102884	Cluster_2035	Pocillopora_meandrina_HIv1___Sc0000006	1102308	1102884	577	533	229	0.28330206378986866	.	UAUGACAGUUUUUCCGACAUCGAAUUUAGC	32	6	501	3	4	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1107123-1107548	Cluster_2036	Pocillopora_meandrina_HIv1___Sc0000006	1107123	1107548	426	126	67	0.2777777777777778	.	UAAGAGAUCAACUGUCAACGGACGGCU	10	1	123	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1117899-1118499	Cluster_2037	Pocillopora_meandrina_HIv1___Sc0000006	1117899	1118499	601	3081	422	0.09315157416423239	-	UAUCAUGGUCUAAAAUUGGUGCUUCAGUU	607	9	2964	11	13	36	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1119518-1119944	Cluster_2038	Pocillopora_meandrina_HIv1___Sc0000006	1119518	1119944	427	194	75	0.30412371134020616	.	UUAAAACGUGUUGCUGAACGCUUGCUAC	32	12	168	7	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1184889-1185316	Cluster_2039	Pocillopora_meandrina_HIv1___Sc0000006	1184889	1185316	428	84	28	0.023809523809523808	-	AAUGGGAAAACGAGAACAGCGUGAGUGA	36	2	80	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1283609-1284026	Cluster_2040	Pocillopora_meandrina_HIv1___Sc0000006	1283609	1284026	418	146	49	0.9315068493150684	+	UAAAUCUGGAGACUGGGC	52	107	21	8	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1704199-1704640	Cluster_2041	Pocillopora_meandrina_HIv1___Sc0000006	1704199	1704640	442	262	109	0.851145038167939	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	42	9	221	3	4	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1760581-1761007	Cluster_2042	Pocillopora_meandrina_HIv1___Sc0000006	1760581	1761007	427	232	102	0.8318965517241379	+	UCGAGAGAUUUAUCCUAGAAAGGCGAGC	24	5	194	1	2	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1764725-1765153	Cluster_2043	Pocillopora_meandrina_HIv1___Sc0000006	1764725	1765153	429	278	93	0.9172661870503597	+	UCAUAACUAGUGUCCAGAUCUCUCAUC	53	2	272	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1770604-1771023	Cluster_2044	Pocillopora_meandrina_HIv1___Sc0000006	1770604	1771023	420	160	89	0.99375	+	UGAGUAUUUUUCUAGUUCUGGGACUGCC	10	1	143	1	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1785098-1785525	Cluster_2045	Pocillopora_meandrina_HIv1___Sc0000006	1785098	1785525	428	262	116	0.9923664122137404	+	UUCGUCACCAUCUUCACUUUCCCUCAGUGC	26	2	249	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1794331-1794759	Cluster_2046	Pocillopora_meandrina_HIv1___Sc0000006	1794331	1794759	429	236	62	0.9788135593220338	+	UUACAAUUUCUCUCUUGACCUUUAAUUUC	91	5	205	1	2	5	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1796727-1797520	Cluster_2047	Pocillopora_meandrina_HIv1___Sc0000006	1796727	1797520	794	1245	341	0.9526104417670683	+	UUGGGAUUGUGACUGGUUUAAAGGUGAGU	108	6	1177	17	16	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1800817-1801246	Cluster_2048	Pocillopora_meandrina_HIv1___Sc0000006	1800817	1801246	430	455	116	0.9934065934065934	+	UGAACUGCAAGAAACUGCUCGUGGAUCUGC	173	6	435	0	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1801823-1802256	Cluster_2049	Pocillopora_meandrina_HIv1___Sc0000006	1801823	1802256	434	409	112	0.9975550122249389	+	UUCACCAGGAACGAUCUCAGGUACUUUG	76	2	394	1	2	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1802435-1802851	Cluster_2050	Pocillopora_meandrina_HIv1___Sc0000006	1802435	1802851	417	214	108	1.0	+	UGUCUGACAGUUGUCGUUCUGUACCGUC	11	2	211	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1810844-1811273	Cluster_2051	Pocillopora_meandrina_HIv1___Sc0000006	1810844	1811273	430	121	27	0.9917355371900827	+	UGCCUUAAGACCAGAUUGUUUACAGUGAGA	66	1	118	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1814556-1815681	Cluster_2052	Pocillopora_meandrina_HIv1___Sc0000006	1814556	1815681	1126	885	305	0.9977401129943503	+	UCCAUUUCCAUACUUGAGCUUGAGCCACC	81	2	857	2	7	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1839225-1839665	Cluster_2053	Pocillopora_meandrina_HIv1___Sc0000006	1839225	1839665	441	314	167	0.9968152866242038	+	UCAGAUUUGUGCUUGAUGGUCUGUGUGC	13	4	305	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1841407-1841835	Cluster_2054	Pocillopora_meandrina_HIv1___Sc0000006	1841407	1841835	429	274	106	0.9963503649635036	+	UGAAAGAUAUUGUGGUGCGACGCCGUAGA	35	0	271	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1846848-1847277	Cluster_2055	Pocillopora_meandrina_HIv1___Sc0000006	1846848	1847277	430	197	73	0.9949238578680203	+	UUUAUAUCUGUGUAUUUCAACUUUGGCGUU	53	0	196	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1850115-1853109	Cluster_2056	Pocillopora_meandrina_HIv1___Sc0000006	1850115	1853109	2995	9941	1694	0.9884317473091239	+	UGAAUACUUAAGGGUCGGUCAGGCUGAUA	1256	39	9699	18	35	62	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1861618-1862023	Cluster_2057	Pocillopora_meandrina_HIv1___Sc0000006	1861618	1862023	406	163	84	0.2147239263803681	.	UAAGCAAUGUCGGUUUCCAAAAUAAACUGG	15	1	151	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1864157-1864869	Cluster_2058	Pocillopora_meandrina_HIv1___Sc0000006	1864157	1864869	713	388	207	0.5077319587628866	.	UAAGGUUUCCAAUUGCCUCCGUUGGGCA	15	14	307	18	7	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1881775-1882475	Cluster_2059	Pocillopora_meandrina_HIv1___Sc0000006	1881775	1882475	701	761	271	0.900131406044678	+	UUAUCCUUUAGUUUUGAGUCUGGCAAUU	65	9	706	4	6	6	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1895833-1897291	Cluster_2060	Pocillopora_meandrina_HIv1___Sc0000006	1895833	1897291	1459	4067	1133	0.5938037865748709	.	UUAAAUCACAUUUACGCUGCAAUCUGGA	114	74	3463	79	107	151	193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1897414-1898305	Cluster_2061	Pocillopora_meandrina_HIv1___Sc0000006	1897414	1898305	892	4917	701	0.8444173276388042	+	UACGCGAGGAAGUCUUUACCCAUGAAUG	1155	47	4582	12	58	107	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1898536-1898963	Cluster_2062	Pocillopora_meandrina_HIv1___Sc0000006	1898536	1898963	428	415	69	0.963855421686747	+	UGAGUUAAUAUCUGGUCCACUGAAGAA	130	3	377	1	1	32	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1899014-1899789	Cluster_2063	Pocillopora_meandrina_HIv1___Sc0000006	1899014	1899789	776	10183	914	0.2563095355003437	.	GAACUUCAGAUCUUUACGUGACUACAGCA	1605	132	9516	22	30	75	408	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1900971-1902395	Cluster_2064	Pocillopora_meandrina_HIv1___Sc0000006	1900971	1902395	1425	10613	1984	0.4148685574295675	.	ACACAGUGCAACUCUCGAAUCUUAAAAAU	804	186	9264	110	116	348	589	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1902953-1903579	Cluster_2065	Pocillopora_meandrina_HIv1___Sc0000006	1902953	1903579	627	708	169	0.9887005649717514	+	UACGGUGUUCCAUGCCUCUGUAUGAAG	96	1	674	8	4	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1921978-1922405	Cluster_2066	Pocillopora_meandrina_HIv1___Sc0000006	1921978	1922405	428	151	74	0.8344370860927153	+	UAUGAAUGCUCUCGUUGUUGACUGAAG	11	1	133	1	4	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1930255-1930840	Cluster_2067	Pocillopora_meandrina_HIv1___Sc0000006	1930255	1930840	586	749	204	0.49666221628838453	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	217	17	635	6	6	38	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1946306-1946734	Cluster_2068	Pocillopora_meandrina_HIv1___Sc0000006	1946306	1946734	429	476	134	0.9474789915966386	+	UGUAGAAUCAAUCUGUUACUAAGACACC	113	4	445	8	0	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1947525-1947926	Cluster_2069	Pocillopora_meandrina_HIv1___Sc0000006	1947525	1947926	402	176	125	0.8068181818181818	+	UACUUCUAACAGCGUUUCUUUUAGCUCU	9	5	153	2	2	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1948501-1949040	Cluster_2070	Pocillopora_meandrina_HIv1___Sc0000006	1948501	1949040	540	507	183	0.7889546351084813	.	UGUAUUCACUUGGGUUAACUCUUCCACA	108	0	488	1	3	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1967024-1967498	Cluster_2071	Pocillopora_meandrina_HIv1___Sc0000006	1967024	1967498	475	5944	154	0.018337819650067293	-	CAUUCUGCUUACACGGUUUGAGGACUUGUA	2504	3	5916	0	4	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1972166-1972656	Cluster_2072	Pocillopora_meandrina_HIv1___Sc0000006	1972166	1972656	491	1033	170	0.11423039690222653	-	UGAGAUUGGCUGGGAUUUUGGUGAGUG	116	12	964	6	8	25	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1978683-1979222	Cluster_2073	Pocillopora_meandrina_HIv1___Sc0000006	1978683	1979222	540	545	216	0.23669724770642203	.	UGUAUUCACUUGGGUUAACUCUUCCACA	104	1	522	4	3	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1979796-1980198	Cluster_2074	Pocillopora_meandrina_HIv1___Sc0000006	1979796	1980198	403	190	126	0.17894736842105263	-	UAUACCUUUGAUUCAUAGCCUUUCUGAU	10	2	166	1	2	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1980989-1981417	Cluster_2075	Pocillopora_meandrina_HIv1___Sc0000006	1980989	1981417	429	459	114	0.032679738562091505	-	UGUAGAAUCAAUCUGUUACUAAGACACC	118	2	440	9	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2002624-2003033	Cluster_2076	Pocillopora_meandrina_HIv1___Sc0000006	2002624	2003033	410	135	54	0.0	-	UGUGGACGUGUGUGUUUCUUUCGUGCGUA	16	0	134	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2004194-2005361	Cluster_2077	Pocillopora_meandrina_HIv1___Sc0000006	2004194	2005361	1168	2864	871	0.04643854748603352	-	UAAUUUCUUUCAGUUGUUGGCUUGAGG	313	20	2604	18	22	45	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2007314-2007983	Cluster_2078	Pocillopora_meandrina_HIv1___Sc0000006	2007314	2007983	670	2135	255	0.006088992974238876	-	UGUCAAAUUCAGGUUGUGUCAGGAGUCUGC	381	8	2087	2	0	26	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2010508-2010936	Cluster_2079	Pocillopora_meandrina_HIv1___Sc0000006	2010508	2010936	429	523	74	0.9521988527724665	+	UUGAGUCUUUCUUUAGUAAUAUGCAGUG	84	0	513	2	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2012350-2012779	Cluster_2080	Pocillopora_meandrina_HIv1___Sc0000006	2012350	2012779	430	227	92	0.03524229074889868	-	UGAUUGAAUUGACUCGUGGUAGCUAUUGG	20	1	216	3	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2027219-2027971	Cluster_2081	Pocillopora_meandrina_HIv1___Sc0000006	2027219	2027971	753	638	265	0.029780564263322883	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	57	8	579	10	8	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2029207-2029637	Cluster_2082	Pocillopora_meandrina_HIv1___Sc0000006	2029207	2029637	431	195	90	0.0	-	UGAUUUGUUGCUCAACGUAAUUCGUAACCGG	19	1	194	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2032671-2033100	Cluster_2083	Pocillopora_meandrina_HIv1___Sc0000006	2032671	2033100	430	900	120	0.0044444444444444444	-	UGUUAUCACGUCUGUACUCUUCAAUCGAC	480	2	892	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2042803-2043817	Cluster_2084	Pocillopora_meandrina_HIv1___Sc0000006	2042803	2043817	1015	1097	319	0.19051959890610756	-	UAAGAUCUCUUCGGUCAGAUCGUCACGG	153	8	1071	2	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2044081-2044510	Cluster_2085	Pocillopora_meandrina_HIv1___Sc0000006	2044081	2044510	430	710	102	0.9169014084507042	+	UGUAUCUGCAGCUCUUGUUAAUUUGUGC	142	1	704	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2058209-2058968	Cluster_2086	Pocillopora_meandrina_HIv1___Sc0000006	2058209	2058968	760	1667	369	0.9436112777444511	+	UGCAAUUUGAAAUCCUUUGUCGGCCAUA	133	20	1421	11	5	168	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2059557-2059984	Cluster_2087	Pocillopora_meandrina_HIv1___Sc0000006	2059557	2059984	428	136	62	0.11029411764705882	-	UCCAACGGCGAGAACGUAGACAUUUAUUUA	32	5	121	2	6	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2062003-2063042	Cluster_2088	Pocillopora_meandrina_HIv1___Sc0000006	2062003	2063042	1040	1402	647	0.6804564907275321	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	54	28	1218	21	15	34	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2064224-2064648	Cluster_2089	Pocillopora_meandrina_HIv1___Sc0000006	2064224	2064648	425	275	166	0.12	-	CUUGGAUUGAUGCAGAAGUUAACA	16	1	244	3	4	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2065278-2065703	Cluster_2090	Pocillopora_meandrina_HIv1___Sc0000006	2065278	2065703	426	164	69	0.018292682926829267	-	UUAUCAGGAUCUCAAGGCGAAUAAAGCAAG	19	6	155	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2067012-2067673	Cluster_2091	Pocillopora_meandrina_HIv1___Sc0000006	2067012	2067673	662	665	275	0.007518796992481203	-	UGCAUCUGAAUAGGUAUUUCAAACAUUCUC	17	8	602	5	3	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2070860-2071363	Cluster_2092	Pocillopora_meandrina_HIv1___Sc0000006	2070860	2071363	504	3721	361	0.5979575382961569	.	UACGAUCUUACACUUGGAAAUAAUAAAAUG	815	8	3597	5	12	62	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2071608-2072035	Cluster_2093	Pocillopora_meandrina_HIv1___Sc0000006	2071608	2072035	428	156	47	0.04487179487179487	-	UCAGAAUUGGUGGGCUCAGUGGACGGCC	35	1	151	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2074248-2075236	Cluster_2094	Pocillopora_meandrina_HIv1___Sc0000006	2074248	2075236	989	1490	451	0.025503355704697986	-	UGAACGGAACUGUUGUUGUGGAUGACAUC	141	21	1380	16	23	16	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2075446-2076023	Cluster_2095	Pocillopora_meandrina_HIv1___Sc0000006	2075446	2076023	578	397	159	0.005037783375314861	-	UCCAUAGUCAUCUGUGAUAUCUUCAGAGA	41	5	368	2	2	1	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2077278-2077698	Cluster_2096	Pocillopora_meandrina_HIv1___Sc0000006	2077278	2077698	421	190	99	0.0	-	UGAAUCGCUGUAGGUUUGGCCUGUGAAG	21	5	183	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2081084-2081505	Cluster_2097	Pocillopora_meandrina_HIv1___Sc0000006	2081084	2081505	422	89	30	0.0	-	UUCUUUACAAACGUGCUACAAGUAACCAUGC	28	0	88	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2082366-2082803	Cluster_2098	Pocillopora_meandrina_HIv1___Sc0000006	2082366	2082803	438	1491	245	0.0013413816230717639	-	UGUGAAUUCCUUCUCAAAAAGAGCCUUG	236	0	1443	3	4	3	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2083932-2084468	Cluster_2099	Pocillopora_meandrina_HIv1___Sc0000006	2083932	2084468	537	1190	241	0.010084033613445379	-	UGUUUCGCUCUUCAGUAAAAUCCCAGUUGA	116	12	1109	4	0	5	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2085227-2085655	Cluster_2100	Pocillopora_meandrina_HIv1___Sc0000006	2085227	2085655	429	174	52	0.0	-	UCCUGCCUCCUCUGUACGAUAUUGCUGUG	59	1	171	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2086586-2087013	Cluster_2101	Pocillopora_meandrina_HIv1___Sc0000006	2086586	2087013	428	206	102	0.0	-	UGAUCUUACUUGUUUCAACUCUGAGUCAGA	29	3	191	2	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2088855-2089286	Cluster_2102	Pocillopora_meandrina_HIv1___Sc0000006	2088855	2089286	432	167	61	0.0	-	UUAUACGUGAAAAAUCUGUUCCGCUCUAUGU	20	2	163	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2089530-2090266	Cluster_2103	Pocillopora_meandrina_HIv1___Sc0000006	2089530	2090266	737	368	172	0.0	-	UAAAUGUCGUGAGGUUGCUGUUUGAGCAUA	19	3	354	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2093361-2094326	Cluster_2104	Pocillopora_meandrina_HIv1___Sc0000006	2093361	2094326	966	8755	654	0.010736721873215305	-	UGAUUUGUUGCUGCCCUCUUGCUGC	2631	57	8383	15	66	108	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2094699-2095269	Cluster_2105	Pocillopora_meandrina_HIv1___Sc0000006	2094699	2095269	571	1050	334	0.047619047619047616	-	UGGUUUGUUGAGGCAUUUGUCUAAUGGC	110	14	1012	9	4	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2097314-2097714	Cluster_2106	Pocillopora_meandrina_HIv1___Sc0000006	2097314	2097714	401	130	79	0.0	-	UUUAUGGAAUCCAUGGUCUGUCCACUGAC	7	6	119	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2097956-2098522	Cluster_2107	Pocillopora_meandrina_HIv1___Sc0000006	2097956	2098522	567	477	197	0.010482180293501049	-	UGCGAUUUAACUGGAUACUGGGUGUGGUU	50	11	447	0	4	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2098992-2099500	Cluster_2108	Pocillopora_meandrina_HIv1___Sc0000006	2098992	2099500	509	478	199	0.0020920502092050207	-	UAGGUUCUUUAAGGGAAUAUUCAAAACGUG	48	5	460	1	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2100159-2100582	Cluster_2109	Pocillopora_meandrina_HIv1___Sc0000006	2100159	2100582	424	282	131	0.01773049645390071	-	UGAUUACUUGCUGGCCUUCCUCUGAAGU	22	1	248	0	0	3	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2100770-2101564	Cluster_2110	Pocillopora_meandrina_HIv1___Sc0000006	2100770	2101564	795	537	274	0.0186219739292365	-	UGGGUGUGGAUUUCCUUAGCUGAUAAAUA	48	16	501	6	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2103424-2103853	Cluster_2111	Pocillopora_meandrina_HIv1___Sc0000006	2103424	2103853	430	163	67	0.0	-	UUCGAACACUUUGUCUCUUACCACCAGAGC	53	1	158	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2105131-2105704	Cluster_2112	Pocillopora_meandrina_HIv1___Sc0000006	2105131	2105704	574	568	247	0.0	-	UUCCUGCACAGCUCACAUUUAAAACUGUC	84	9	549	2	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2106041-2107040	Cluster_2113	Pocillopora_meandrina_HIv1___Sc0000006	2106041	2107040	1000	3005	493	0.07454242928452579	-	UGCACUUCAUUUUCUGGGAUUUCAUUGUUC	1056	46	2699	22	12	187	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2107146-2108374	Cluster_2114	Pocillopora_meandrina_HIv1___Sc0000006	2107146	2108374	1229	9654	1191	0.00020716801325875285	-	UUGGUGUGAUUGUCAUGUCUGGGAAUUUU	859	107	9255	41	116	62	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2108910-2109311	Cluster_2115	Pocillopora_meandrina_HIv1___Sc0000006	2108910	2109311	402	97	33	0.0	-	UGUGAAAAUUCUCUGCGCCAAUUAGUUGAGC	27	0	93	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2109466-2109887	Cluster_2116	Pocillopora_meandrina_HIv1___Sc0000006	2109466	2109887	422	107	49	0.0	-	UGCUUUAUCAAGACUAACUAUUAUAUCUGA	15	3	93	2	5	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2110009-2110473	Cluster_2117	Pocillopora_meandrina_HIv1___Sc0000006	2110009	2110473	465	1873	165	0.0	-	UACAGCUCUUCAAUUUCUGCAUUUCCAGA	673	2	1862	5	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2222589-2223007	Cluster_2118	Pocillopora_meandrina_HIv1___Sc0000006	2222589	2223007	419	104	6	0.0	-	GAAGUUCUGGUUUAAAAAA	70	103	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2361258-2361678	Cluster_2119	Pocillopora_meandrina_HIv1___Sc0000006	2361258	2361678	421	194	77	0.29896907216494845	.	UGGUAUUUUGAUUUUCUGAUAGACAAGA	42	11	171	8	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2367614-2368043	Cluster_2120	Pocillopora_meandrina_HIv1___Sc0000006	2367614	2368043	430	143	50	0.0	-	UCUGCUGUAUAUUCCAAUCUUUGUCAAUGA	22	0	135	0	0	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2381039-2381442	Cluster_2121	Pocillopora_meandrina_HIv1___Sc0000006	2381039	2381442	404	218	112	0.10091743119266056	-	UCAUCUUUGGUACAUUAGUAAUCACACAA	19	2	199	1	1	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2382027-2382706	Cluster_2122	Pocillopora_meandrina_HIv1___Sc0000006	2382027	2382706	680	1298	357	0.2226502311248074	.	UCCAGUACUGCAUUUUCCCCAAUUUUGGC	133	14	1193	2	6	24	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2406541-2407009	Cluster_2123	Pocillopora_meandrina_HIv1___Sc0000006	2406541	2407009	469	1811	181	0.003865267807840972	-	UGGGGAAGGUCUUCUUGGUCUGGAGAAA	487	11	1662	9	6	40	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2407808-2408403	Cluster_2124	Pocillopora_meandrina_HIv1___Sc0000006	2407808	2408403	596	833	164	0.021608643457382955	-	UUUGAUUUUAAUGGGAUGCUACUGCCCUGUA	190	25	782	4	5	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2409391-2409959	Cluster_2125	Pocillopora_meandrina_HIv1___Sc0000006	2409391	2409959	569	212	87	0.009433962264150943	-	UUGUCUUGUAUACUCCUUGGCUAGCUGU	23	2	203	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2415407-2415972	Cluster_2126	Pocillopora_meandrina_HIv1___Sc0000006	2415407	2415972	566	751	178	0.0013315579227696406	-	UGAAACGAAUAGCUGCUCAACCUGUGGG	68	6	721	0	5	14	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2430788-2432068	Cluster_2127	Pocillopora_meandrina_HIv1___Sc0000006	2430788	2432068	1281	5680	1154	0.964612676056338	+	UGAUCUGACUGUUUCAUGGCUGAACUGUG	356	23	5554	4	11	40	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2446610-2447281	Cluster_2128	Pocillopora_meandrina_HIv1___Sc0000006	2446610	2447281	672	401	125	0.0773067331670823	-	UGCGAGGAAAAGCUUGUGUAGACGCGGC	53	7	381	3	2	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2448506-2448935	Cluster_2129	Pocillopora_meandrina_HIv1___Sc0000006	2448506	2448935	430	102	20	0.00980392156862745	-	UGCUUGUCCCACUGUACGACCUUAGUCGUC	68	0	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2456274-2456696	Cluster_2130	Pocillopora_meandrina_HIv1___Sc0000006	2456274	2456696	423	109	36	0.0	-	UAGGAUCUUGUAAGAGAAGCUGCGCUUCCA	30	1	105	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2481721-2482147	Cluster_2131	Pocillopora_meandrina_HIv1___Sc0000006	2481721	2482147	427	251	125	0.0	-	UGCUACCCAGUUCUGUGUCUUCAUUGAAUG	17	3	244	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2483223-2483653	Cluster_2132	Pocillopora_meandrina_HIv1___Sc0000006	2483223	2483653	431	240	104	0.058333333333333334	-	UUCUCGCUGAUUGAUCUAAAUAAAGACUUU	21	2	237	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2490004-2491209	Cluster_2133	Pocillopora_meandrina_HIv1___Sc0000006	2490004	2491209	1206	4400	757	0.003181818181818182	-	UACUGUCAGGUUGGUGAAAGUGUAUGAGU	942	58	4117	18	86	27	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2492777-2493187	Cluster_2134	Pocillopora_meandrina_HIv1___Sc0000006	2492777	2493187	411	174	80	0.07471264367816093	-	UAAUAUACUGCUGGCGUCACUAGAACAGGU	12	1	168	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2493700-2494299	Cluster_2135	Pocillopora_meandrina_HIv1___Sc0000006	2493700	2494299	600	391	182	0.023017902813299233	-	UGAAAUCUGCUGCACAAUAUUGUUUAAGG	24	1	377	2	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2494751-2495463	Cluster_2136	Pocillopora_meandrina_HIv1___Sc0000006	2494751	2495463	713	973	346	0.009249743062692703	-	UGGUUGCUAUACACUCUCUGAGCUUGGU	99	10	932	2	4	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2510446-2511480	Cluster_2137	Pocillopora_meandrina_HIv1___Sc0000006	2510446	2511480	1035	578	187	0.01903114186851211	-	UAUGACGGUACUUUCAAUGGCUUCAGGC	125	2	526	6	16	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2516342-2516950	Cluster_2138	Pocillopora_meandrina_HIv1___Sc0000006	2516342	2516950	609	450	131	0.0	-	UGUCCUUCCUGAAGAUGGUGUAACCAGGA	41	3	389	43	7	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2534327-2535028	Cluster_2139	Pocillopora_meandrina_HIv1___Sc0000006	2534327	2535028	702	1876	320	0.18230277185501065	-	UUUCCUCUGUUACUGGUAGGAACGGACAGU	224	16	1704	39	10	19	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2536782-2537189	Cluster_2140	Pocillopora_meandrina_HIv1___Sc0000006	2536782	2537189	408	136	64	0.007352941176470588	-	UAAACGUCUUUCUGCCAGCAACAGCUUAUC	14	0	135	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2544036-2544465	Cluster_2141	Pocillopora_meandrina_HIv1___Sc0000006	2544036	2544465	430	134	40	0.0	-	UGUUCAAGAAUCUGUCUGGUCAAAUCCAUC	61	1	131	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2544882-2545307	Cluster_2142	Pocillopora_meandrina_HIv1___Sc0000006	2544882	2545307	426	116	53	0.0	-	UAGGAAAGAUCUUGAUGACUAUGAUUCCCA	27	3	106	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2547406-2547834	Cluster_2143	Pocillopora_meandrina_HIv1___Sc0000006	2547406	2547834	429	158	44	0.0	-	CAGGAUUCGACACUGUAAAUUUCAUGGUG	46	1	154	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2552089-2552517	Cluster_2144	Pocillopora_meandrina_HIv1___Sc0000006	2552089	2552517	429	244	84	0.00819672131147541	-	UGGUAUUGGAUACUCUGAGCACUUGAGGGC	32	3	235	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2554191-2554619	Cluster_2145	Pocillopora_meandrina_HIv1___Sc0000006	2554191	2554619	429	148	52	0.0	-	UUGGUUUCCGAGGCACGGUCUUUGACAGU	47	3	142	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2556125-2556552	Cluster_2146	Pocillopora_meandrina_HIv1___Sc0000006	2556125	2556552	428	147	48	0.0	-	UGCAUAUCUGCUGCAGACAAGGUGAAGAAU	43	1	139	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2561826-2564936	Cluster_2147	Pocillopora_meandrina_HIv1___Sc0000006	2561826	2564936	3111	8351	2131	0.01628547479343791	-	UCUUCAAUGAUUUCUUGUGCUGUCUGGG	359	61	8032	41	38	79	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2565126-2566072	Cluster_2148	Pocillopora_meandrina_HIv1___Sc0000006	2565126	2566072	947	2127	677	0.031029619181946404	-	UGUUUGGAGUGUCUGACGGCGUCUGUUC	101	15	2007	13	13	24	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2568267-2568696	Cluster_2149	Pocillopora_meandrina_HIv1___Sc0000006	2568267	2568696	430	821	141	0.0	-	UUUUCACAAUCCUUCUGCUUCACUGUAGC	335	0	811	1	3	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2569202-2570581	Cluster_2150	Pocillopora_meandrina_HIv1___Sc0000006	2569202	2570581	1380	10882	979	0.0001837897445322551	-	UAACACAAACUAUCUGUUGAUUCAUGAGG	1601	150	10443	92	29	99	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2573126-2573703	Cluster_2151	Pocillopora_meandrina_HIv1___Sc0000006	2573126	2573703	578	1501	253	0.010659560293137908	-	UUGCAAAGAUAAAUCCGUGGCGAACUUC	232	9	1473	2	4	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2575795-2576223	Cluster_2152	Pocillopora_meandrina_HIv1___Sc0000006	2575795	2576223	429	141	44	0.0	-	UGUACAAAACUCUGAUGCCAUUAUGCCUC	61	0	134	3	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2577640-2580188	Cluster_2153	Pocillopora_meandrina_HIv1___Sc0000006	2577640	2580188	2549	7776	2162	0.07445987654320987	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	265	85	7153	50	50	203	235	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2580255-2580676	Cluster_2154	Pocillopora_meandrina_HIv1___Sc0000006	2580255	2580676	422	122	65	0.03278688524590164	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	11	3	108	1	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2581562-2583132	Cluster_2155	Pocillopora_meandrina_HIv1___Sc0000006	2581562	2583132	1571	13979	1659	0.03319264611202518	-	UUUGACGGUCCUUUCAAUAUCUUCGGGAU	2078	232	13298	48	63	83	255	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2583203-2583715	Cluster_2156	Pocillopora_meandrina_HIv1___Sc0000006	2583203	2583715	513	6251	485	0.6358982562789953	.	CGGUACUACAAAAAGAUCCUGAUGGACAGU	1598	34	5248	41	14	99	815	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2586120-2586969	Cluster_2157	Pocillopora_meandrina_HIv1___Sc0000006	2586120	2586969	850	1608	395	0.39800995024875624	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	185	23	1530	8	4	18	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2612856-2613281	Cluster_2158	Pocillopora_meandrina_HIv1___Sc0000006	2612856	2613281	426	227	67	0.022026431718061675	-	UGAUGAUUCAUAUUGUUACAGUUUGU	81	7	202	1	0	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2629857-2630321	Cluster_2159	Pocillopora_meandrina_HIv1___Sc0000006	2629857	2630321	465	2883	371	0.0	-	CUGAUUAAAAUAACCUCACAGAGCUCU	227	572	1734	228	174	47	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2630686-2631145	Cluster_2160	Pocillopora_meandrina_HIv1___Sc0000006	2630686	2631145	460	4457	631	0.0	-	GAGGAAUGUGAAUAUGUCUACUGAUGAUA	529	381	3541	137	138	118	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2631458-2631927	Cluster_2161	Pocillopora_meandrina_HIv1___Sc0000006	2631458	2631927	470	1355	421	0.0	-	UGUCAAUGAAGAACAAUACGA	91	183	658	130	129	130	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2632079-2632574	Cluster_2162	Pocillopora_meandrina_HIv1___Sc0000006	2632079	2632574	496	5322	519	0.0	-	CCACUGUGAUGACUCGAAUAAUCCC	1069	643	2592	275	585	562	665	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2632755-2633251	Cluster_2163	Pocillopora_meandrina_HIv1___Sc0000006	2632755	2633251	497	3179	459	0.0	-	CCACCGUGAUGACUAGAAUA	231	1066	1068	263	218	305	259	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2760526-2760954	Cluster_2164	Pocillopora_meandrina_HIv1___Sc0000006	2760526	2760954	429	316	47	0.9968354430379747	+	UUUCAAGAAAGCUCUGGAAUUGUGUGCAG	109	3	301	1	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2904384-2904807	Cluster_2165	Pocillopora_meandrina_HIv1___Sc0000006	2904384	2904807	424	78	19	0.02564102564102564	-	UUCAAUCACUUGCUUGAGAUCGUGU	20	2	74	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3026686-3027097	Cluster_2166	Pocillopora_meandrina_HIv1___Sc0000006	3026686	3027097	412	127	70	0.968503937007874	+	UGACCGAGGUCUUGAAAAUACUCA	8	51	14	27	16	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3077638-3078920	Cluster_2167	Pocillopora_meandrina_HIv1___Sc0000006	3077638	3078920	1283	1752	582	0.8715753424657534	+	UAAUGCUGAUCUUCUGUUCUUUACAGUA	56	15	1608	4	16	51	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3080456-3081013	Cluster_2168	Pocillopora_meandrina_HIv1___Sc0000006	3080456	3081013	558	1008	302	0.6785714285714286	.	UAAACAUGCAGCGCCGUCUUCUACUGAGA	159	4	947	8	4	21	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3082040-3083001	Cluster_2169	Pocillopora_meandrina_HIv1___Sc0000006	3082040	3083001	962	2704	563	0.5462278106508875	.	AAAUGUCUCAAGUUCAGUGGAAUCAGUG	234	12	2527	5	17	27	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3084650-3085078	Cluster_2170	Pocillopora_meandrina_HIv1___Sc0000006	3084650	3085078	429	298	64	0.9865771812080537	+	UAGGACAACUGAGAAUCCACGUAGACUC	94	0	290	1	5	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3160144-3160569	Cluster_2171	Pocillopora_meandrina_HIv1___Sc0000006	3160144	3160569	426	931	93	0.022556390977443608	-	GUUUAUAUCAAGUUUUCAGACUGUG	404	4	651	8	2	148	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3181837-3182252	Cluster_2172	Pocillopora_meandrina_HIv1___Sc0000006	3181837	3182252	416	144	92	0.7152777777777778	.	UGCGGACCUUUGUGAGAACAG	17	77	7	43	14	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3248159-3248782	Cluster_2173	Pocillopora_meandrina_HIv1___Sc0000006	3248159	3248782	624	1332	189	0.023273273273273273	-	UCAUAGAGUUUAAGACAAGCCCAACAGGUC	410	10	1245	15	34	17	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3295055-3295481	Cluster_2174	Pocillopora_meandrina_HIv1___Sc0000006	3295055	3295481	427	113	37	0.0	-	UGGGUUGACUGAAUUUGUGUGGAAGCUG	26	14	93	0	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3295559-3295986	Cluster_2175	Pocillopora_meandrina_HIv1___Sc0000006	3295559	3295986	428	107	14	0.009345794392523364	-	UAACCCGAGAACUGACACGUGAGUAGUC	77	0	101	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3300115-3300542	Cluster_2176	Pocillopora_meandrina_HIv1___Sc0000006	3300115	3300542	428	105	16	0.047619047619047616	-	UAACCCGAGAACUGACACGUGAGUAGUC	66	1	89	1	0	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3308601-3309513	Cluster_2177	Pocillopora_meandrina_HIv1___Sc0000006	3308601	3309513	913	1089	480	0.08907254361799816	-	UCUGUACUAGAGCAAGAACAAGGUUUU	37	16	984	7	4	13	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3309928-3310589	Cluster_2178	Pocillopora_meandrina_HIv1___Sc0000006	3309928	3310589	662	225	95	0.013333333333333334	-	UAUCAAGUAGAGAUGUCUGAGCCCGAUG	20	1	221	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3447869-3448298	Cluster_2179	Pocillopora_meandrina_HIv1___Sc0000006	3447869	3448298	430	201	51	0.9154228855721394	+	UCAGAUUUUAGGUGGCAUACGAAACACUCA	47	2	194	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3486280-3486972	Cluster_2180	Pocillopora_meandrina_HIv1___Sc0000006	3486280	3486972	693	509	157	1.0	+	GUUAGUGAUGAUGAAGUAAA	70	119	306	26	15	24	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3756606-3757221	Cluster_2181	Pocillopora_meandrina_HIv1___Sc0000006	3756606	3757221	616	2593	915	1.0	+	CGCGGAUAAAAGACAGUUUGAAUGAGCU	60	687	1143	207	164	196	196	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3772459-3772886	Cluster_2182	Pocillopora_meandrina_HIv1___Sc0000006	3772459	3772886	428	156	41	1.0	+	UUGAAUCUUCUCUCACAUUCUCUGGAGC	56	2	149	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3800420-3802391	Cluster_2183	Pocillopora_meandrina_HIv1___Sc0000006	3800420	3802391	1972	5716	1538	0.9394681595521344	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	472	27	5466	19	23	67	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3802936-3803664	Cluster_2184	Pocillopora_meandrina_HIv1___Sc0000006	3802936	3803664	729	313	153	0.9456869009584664	+	UUAUAUAUUAAAUCUGCUUGAAUGAUCGC	14	1	278	3	6	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3804713-3805120	Cluster_2185	Pocillopora_meandrina_HIv1___Sc0000006	3804713	3805120	408	175	107	0.19428571428571428	-	UUGACGCACAUUUCUGAGCCUAGAAAUC	9	3	148	1	0	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3807595-3808404	Cluster_2186	Pocillopora_meandrina_HIv1___Sc0000006	3807595	3808404	810	4553	648	0.9690314078629475	+	UGCGAUAAAUGGCCAUGUGCAGUGAACC	878	43	4417	4	25	26	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3809026-3809444	Cluster_2187	Pocillopora_meandrina_HIv1___Sc0000006	3809026	3809444	419	101	48	0.9900990099009901	+	AGCCUCAAGGAUGUUAUAAGAUAUG	19	7	89	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3816637-3817067	Cluster_2188	Pocillopora_meandrina_HIv1___Sc0000006	3816637	3817067	431	240	89	0.8833333333333333	+	UGUAAACUCUUGAAGGCUCUGAAAUAGCUCA	37	1	219	6	4	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3821515-3821940	Cluster_2189	Pocillopora_meandrina_HIv1___Sc0000006	3821515	3821940	426	139	49	0.9784172661870504	+	UUCUAGACAAGAUCUUUAAUAAAAAAUAA	25	8	124	3	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3825839-3826580	Cluster_2190	Pocillopora_meandrina_HIv1___Sc0000006	3825839	3826580	742	3215	639	0.9779160186625194	+	UAACCGAUUUGAUCAAUGCUUCUGACGUGC	182	16	3128	12	7	25	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3834837-3835264	Cluster_2191	Pocillopora_meandrina_HIv1___Sc0000006	3834837	3835264	428	215	76	0.9953488372093023	+	UUUAUCAGUAUGAUGACUCUUUUUCACA	19	5	190	16	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3837756-3838530	Cluster_2192	Pocillopora_meandrina_HIv1___Sc0000006	3837756	3838530	775	986	383	0.8549695740365112	+	UAGGCGUUAAACUUUCAUUGAUAA	152	4	754	1	12	14	201	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3841572-3842002	Cluster_2193	Pocillopora_meandrina_HIv1___Sc0000006	3841572	3842002	431	430	53	1.0	+	UUACUGCACUGAGGAUAACAAUGAUCAAUG	117	3	419	0	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3864910-3865336	Cluster_2194	Pocillopora_meandrina_HIv1___Sc0000006	3864910	3865336	427	117	55	0.8974358974358975	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	54	4	105	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3870710-3871268	Cluster_2195	Pocillopora_meandrina_HIv1___Sc0000006	3870710	3871268	559	296	146	0.9459459459459459	+	UAUUAUCGAUAAGAAUCCCUAAACAUGU	16	3	282	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3872110-3872853	Cluster_2196	Pocillopora_meandrina_HIv1___Sc0000006	3872110	3872853	744	325	160	0.9261538461538461	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	57	3	310	1	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3887839-3888263	Cluster_2197	Pocillopora_meandrina_HIv1___Sc0000006	3887839	3888263	425	122	49	0.9754098360655737	+	UUUUCCAGAAAGACCAUUAACACUU	26	2	115	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3898252-3898679	Cluster_2198	Pocillopora_meandrina_HIv1___Sc0000006	3898252	3898679	428	289	133	0.9826989619377162	+	UGACUCAGUAGGGGUGUUUCUAUGCGCCAGU	15	1	273	2	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3899292-3899913	Cluster_2199	Pocillopora_meandrina_HIv1___Sc0000006	3899292	3899913	622	943	234	0.9925768822905621	+	UGUAAUACUUCAACAAGGGUGCCUCUGUC	138	2	918	2	2	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3900289-3901926	Cluster_2200	Pocillopora_meandrina_HIv1___Sc0000006	3900289	3901926	1638	2142	727	0.9757236227824463	+	UCUUCAAUGAUUUCUUGUGCUGUCUGGG	122	15	2032	7	15	20	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3907552-3908831	Cluster_2201	Pocillopora_meandrina_HIv1___Sc0000006	3907552	3908831	1280	2194	410	0.9111212397447584	+	UGAUUGUGUUUUCCAGGAACGUGUAAUGC	362	5	2016	9	16	41	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3911965-3912393	Cluster_2202	Pocillopora_meandrina_HIv1___Sc0000006	3911965	3912393	429	243	85	0.9629629629629629	+	UCUCUCUGUUUUGGCCACCUGAAUGUGCA	36	10	227	3	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3921710-3922139	Cluster_2203	Pocillopora_meandrina_HIv1___Sc0000006	3921710	3922139	430	294	37	1.0	+	UGCUUCUAGAGUCAAGUGGGACAAAGACU	87	0	291	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3953958-3954951	Cluster_2204	Pocillopora_meandrina_HIv1___Sc0000006	3953958	3954951	994	602	342	0.4568106312292359	.	UGAGAUCGUGGAAGGCCAAGUUCCUUGC	23	19	557	4	2	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4058767-4059686	Cluster_2205	Pocillopora_meandrina_HIv1___Sc0000006	4058767	4059686	920	4496	331	0.17704626334519574	-	UUGGUGUCAUAGAAGCUUGUAGUAUCU	1802	62	4296	26	6	59	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4360629-4361217	Cluster_2206	Pocillopora_meandrina_HIv1___Sc0000006	4360629	4361217	589	194	71	0.02577319587628866	-	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	31	2	190	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4527159-4527577	Cluster_2207	Pocillopora_meandrina_HIv1___Sc0000006	4527159	4527577	419	132	25	0.9848484848484849	+	CGGCCUGAAAAAAAAAAA	45	103	3	15	5	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4597982-4598401	Cluster_2208	Pocillopora_meandrina_HIv1___Sc0000006	4597982	4598401	420	184	10	0.9891304347826086	+	UGAAAAUCUUUGCUCUGAAA	132	179	1	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4669470-4670085	Cluster_2209	Pocillopora_meandrina_HIv1___Sc0000006	4669470	4670085	616	439	212	0.002277904328018223	-	UAGGAACAUGUCAAUUCGCACAUUC	81	80	269	21	26	15	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4741301-4741763	Cluster_2210	Pocillopora_meandrina_HIv1___Sc0000006	4741301	4741763	463	680	107	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	230	10	657	3	3	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4761102-4761535	Cluster_2211	Pocillopora_meandrina_HIv1___Sc0000006	4761102	4761535	434	1874	54	0.0016008537886872999	-	UGUACCGUGAAACUGGACACUGAAGUUC	1163	0	1836	0	1	36	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4791746-4792175	Cluster_2212	Pocillopora_meandrina_HIv1___Sc0000006	4791746	4792175	430	180	46	0.08888888888888889	-	UGUGUUCCGAAUUGCACGAAAAAGGUCUAU	62	18	151	0	11	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4866022-4866448	Cluster_2213	Pocillopora_meandrina_HIv1___Sc0000006	4866022	4866448	427	136	56	0.8823529411764706	+	UGAAGGGUUAUACAAAAAUAGGCUGUG	24	1	123	0	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5140124-5140554	Cluster_2214	Pocillopora_meandrina_HIv1___Sc0000006	5140124	5140554	431	108	38	0.037037037037037035	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	36	0	104	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5141311-5141739	Cluster_2215	Pocillopora_meandrina_HIv1___Sc0000006	5141311	5141739	429	235	107	0.1276595744680851	-	UAGGCUAGUAGACCAAGUGACGCAGGCGU	28	1	210	1	2	16	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5163420-5163845	Cluster_2216	Pocillopora_meandrina_HIv1___Sc0000006	5163420	5163845	426	100	48	0.02	-	UGACGUCCAAACGAGCCUGAUCUUGAUGG	11	1	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5164016-5164444	Cluster_2217	Pocillopora_meandrina_HIv1___Sc0000006	5164016	5164444	429	2620	94	0.0	-	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1598	7	2606	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5165241-5165661	Cluster_2218	Pocillopora_meandrina_HIv1___Sc0000006	5165241	5165661	421	92	33	0.043478260869565216	-	UUUUACGCAUGGGCUUUGAUGGU	17	1	65	0	3	20	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5171586-5172369	Cluster_2219	Pocillopora_meandrina_HIv1___Sc0000006	5171586	5172369	784	343	141	0.7434402332361516	.	UGUAAGACGCACUCUACUCUGUUGU	62	14	291	13	6	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5240371-5240798	Cluster_2220	Pocillopora_meandrina_HIv1___Sc0000006	5240371	5240798	428	340	117	0.07058823529411765	-	UCUGUCUCCUCUGUAAUAAUGACACUGA	68	5	321	1	1	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5363172-5363595	Cluster_2221	Pocillopora_meandrina_HIv1___Sc0000006	5363172	5363595	424	120	39	0.8083333333333333	+	UUGGUGCAUUUCGAUCCUUGCUGUUC	16	2	115	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5536684-5537200	Cluster_2222	Pocillopora_meandrina_HIv1___Sc0000006	5536684	5537200	517	5623	1078	0.9937755646452072	+	GCUGAUUGAAAACUUUUCCCAAUA	353	1460	1883	537	444	435	864	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5546629-5547169	Cluster_2223	Pocillopora_meandrina_HIv1___Sc0000006	5546629	5547169	541	1789	424	0.0	-	GAUGGCUUGGGUGCUCAUGGGAACAUAU	186	102	1269	80	113	139	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5547280-5547753	Cluster_2224	Pocillopora_meandrina_HIv1___Sc0000006	5547280	5547753	474	603	229	0.0	-	GCUACUCAGCUGUGACUGU	107	224	169	28	60	59	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5733785-5734203	Cluster_2225	Pocillopora_meandrina_HIv1___Sc0000006	5733785	5734203	419	658	13	0.001519756838905775	-	CUUUCUGGAGUUAAGGCUU	544	658	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5739669-5740104	Cluster_2226	Pocillopora_meandrina_HIv1___Sc0000006	5739669	5740104	436	400	168	0.9975	+	GCUGAUUGAAAACUUUUCCCAAUA	30	117	127	37	25	44	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5820329-5821030	Cluster_2227	Pocillopora_meandrina_HIv1___Sc0000006	5820329	5821030	702	587	154	1.0	+	UGCCUCAAAUCAUAAAAUUACUUGU	107	8	573	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5824415-5825515	Cluster_2228	Pocillopora_meandrina_HIv1___Sc0000006	5824415	5825515	1101	1228	364	0.997557003257329	+	UAACCUGUGAAAUAAAAAGAAUGAAGUUGAC	75	6	1165	2	6	18	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5830168-5831006	Cluster_2229	Pocillopora_meandrina_HIv1___Sc0000006	5830168	5831006	839	3296	511	0.9833131067961165	+	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUGG	493	47	3116	27	50	26	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5831442-5832293	Cluster_2230	Pocillopora_meandrina_HIv1___Sc0000006	5831442	5832293	852	1045	320	1.0	+	UUGUCUGCUGUACUCUAACGAUUUGUUUC	65	3	1016	8	2	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5832723-5834537	Cluster_2231	Pocillopora_meandrina_HIv1___Sc0000006	5832723	5834537	1815	10383	1593	0.9494365790234036	+	UGCAUCAAGCAGGAAAAAAAGACAAUGA	746	91	9602	72	130	178	310	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5834970-5835396	Cluster_2232	Pocillopora_meandrina_HIv1___Sc0000006	5834970	5835396	427	272	76	1.0	+	UGUUCCACUACAGCCUCUCUGAACUGGAGU	26	3	266	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5837604-5839281	Cluster_2233	Pocillopora_meandrina_HIv1___Sc0000006	5837604	5839281	1678	2275	669	1.0	+	UGAGAUGUCACUAUUGAAUAUUUAACAAGA	179	37	2175	8	9	27	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5839523-5840406	Cluster_2234	Pocillopora_meandrina_HIv1___Sc0000006	5839523	5840406	884	1017	340	1.0	+	UGACAUGCUUAGAAUUUUCAGCUAAAUUGA	149	5	986	2	2	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5840526-5841061	Cluster_2235	Pocillopora_meandrina_HIv1___Sc0000006	5840526	5841061	536	733	245	1.0	+	UGAUAAUAGAGAGACGUUAAUUGUAGCAGU	43	6	705	0	3	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5841188-5841618	Cluster_2236	Pocillopora_meandrina_HIv1___Sc0000006	5841188	5841618	431	835	102	1.0	+	UGAAAAGAACCUGAGACAGAACCACUAGA	172	9	823	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5841975-5842405	Cluster_2237	Pocillopora_meandrina_HIv1___Sc0000006	5841975	5842405	431	816	91	1.0	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	178	8	804	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5842763-5843542	Cluster_2238	Pocillopora_meandrina_HIv1___Sc0000006	5842763	5843542	780	7244	401	0.9998619547211486	+	UGCCACAUAGUGAAUUUUGCUGAACGUU	869	41	7069	95	10	7	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5843551-5843981	Cluster_2239	Pocillopora_meandrina_HIv1___Sc0000006	5843551	5843981	431	827	109	0.9951632406287787	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	196	13	806	1	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5846808-5847473	Cluster_2240	Pocillopora_meandrina_HIv1___Sc0000006	5846808	5847473	666	4401	710	0.035673710520336285	-	UGAAGCGAUAUGAAAGAUCUUGAUGUG	315	30	4239	10	20	35	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5848646-5849074	Cluster_2241	Pocillopora_meandrina_HIv1___Sc0000006	5848646	5849074	429	222	109	0.7027027027027027	.	UGUUGCAAAGGCUAUGGCAAACACUC	16	6	209	6	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5849772-5850691	Cluster_2242	Pocillopora_meandrina_HIv1___Sc0000006	5849772	5850691	920	779	255	0.8267008985879333	+	UACUGAUGGUUUGUCUUUAAACUGAAAUU	87	4	738	3	4	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5850812-5851241	Cluster_2243	Pocillopora_meandrina_HIv1___Sc0000006	5850812	5851241	430	261	111	0.19157088122605365	-	UCCCAGCGUAUGAACGACUCUCUUAUUUCA	32	1	232	1	1	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5851721-5852502	Cluster_2244	Pocillopora_meandrina_HIv1___Sc0000006	5851721	5852502	782	328	90	1.0	+	UGGACUUUGCUUCUUUUGCCAAUUGUGC	73	3	320	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5858323-5860151	Cluster_2245	Pocillopora_meandrina_HIv1___Sc0000006	5858323	5860151	1829	9236	1372	0.0454742312689476	-	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	3023	40	8929	25	52	66	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5860311-5860880	Cluster_2246	Pocillopora_meandrina_HIv1___Sc0000006	5860311	5860880	570	6193	478	0.9358953657355078	+	UGCAAUGGAUCUAGUACUAUCAAGUUC	2920	24	6018	13	73	31	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5860986-5861969	Cluster_2247	Pocillopora_meandrina_HIv1___Sc0000006	5860986	5861969	984	1339	404	0.7408513816280806	.	UGUUUUGUUUCUGAUUAACCUUGUGC	143	14	1237	20	5	22	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5863646-5865684	Cluster_2248	Pocillopora_meandrina_HIv1___Sc0000006	5863646	5865684	2039	23334	3602	0.062398217193794465	-	UGAGAGAAAUUUUUCUUUGAAAUCUGCAGG	2315	218	22004	141	196	285	490	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5866040-5868414	Cluster_2249	Pocillopora_meandrina_HIv1___Sc0000006	5866040	5868414	2375	5440	1781	0.1917279411764706	-	UGAGGAAUAUAUCAAAGAAGGUCGUGAUC	169	72	5090	88	34	66	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5872014-5873341	Cluster_2250	Pocillopora_meandrina_HIv1___Sc0000006	5872014	5873341	1328	6737	1108	0.9208846667656226	+	UACUUCCAUGACUGGUUGAGGAUAGAUG	992	66	5813	41	51	502	264	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5875872-5877160	Cluster_2251	Pocillopora_meandrina_HIv1___Sc0000006	5875872	5877160	1289	3672	898	0.9223856209150327	+	UCAGCUCUUUCUAACUCUGCAAUUUGAGGU	244	25	3424	20	95	55	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5882690-5883490	Cluster_2252	Pocillopora_meandrina_HIv1___Sc0000006	5882690	5883490	801	7346	616	0.03552953988565206	-	UGCGUGUAAAAGCUGGUCUCAAGAACC	2139	21	7026	82	14	42	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5883592-5884928	Cluster_2253	Pocillopora_meandrina_HIv1___Sc0000006	5883592	5884928	1337	10102	960	0.7076816471985745	.	UGUUACUGUAGAUGGGGUUUCCCUAGC	2227	42	8920	14	85	72	969	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5884948-5885789	Cluster_2254	Pocillopora_meandrina_HIv1___Sc0000006	5884948	5885789	842	5447	801	0.4327152561042776	.	UUUUAUCUCAGGGAAAGCUGCAAAACUG	942	72	4789	49	82	224	231	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5888776-5889198	Cluster_2255	Pocillopora_meandrina_HIv1___Sc0000006	5888776	5889198	423	120	41	1.0	+	UGAUUGUGAUCCGCUGUUCUUGAAAUGAG	30	4	110	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5889962-5890386	Cluster_2256	Pocillopora_meandrina_HIv1___Sc0000006	5889962	5890386	425	229	106	1.0	+	UGGUAUCUUCAGGGCUUCUGUCAUUU	35	4	211	0	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5890418-5890908	Cluster_2257	Pocillopora_meandrina_HIv1___Sc0000006	5890418	5890908	491	294	120	1.0	+	UGGUCUUGAUUGCAGGAAGCAGGUGUUA	28	1	281	4	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5891466-5891894	Cluster_2258	Pocillopora_meandrina_HIv1___Sc0000006	5891466	5891894	429	170	74	1.0	+	UCCUCGCUGCAGCAUCUCUAAUUGUAUGGC	25	1	167	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5891954-5892384	Cluster_2259	Pocillopora_meandrina_HIv1___Sc0000006	5891954	5892384	431	184	92	1.0	+	UUGGAUCACAGUUUGUUGCCUCGGACAGGCU	19	1	169	0	6	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5894348-5894781	Cluster_2260	Pocillopora_meandrina_HIv1___Sc0000006	5894348	5894781	434	344	112	0.014534883720930232	-	UGCUCGCUGACAAAGGAAACUCUCACG	54	30	237	1	8	57	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5896720-5897140	Cluster_2261	Pocillopora_meandrina_HIv1___Sc0000006	5896720	5897140	421	150	75	1.0	+	UGAUUUUGAAAACUCUGAUGGCUUUUG	19	3	143	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5899020-5899442	Cluster_2262	Pocillopora_meandrina_HIv1___Sc0000006	5899020	5899442	423	123	51	0.983739837398374	+	UGCAAUAUACAAGGCUCGAUUUCUCAAUG	21	2	115	1	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5901952-5902378	Cluster_2263	Pocillopora_meandrina_HIv1___Sc0000006	5901952	5902378	427	188	72	1.0	+	UGUGUAUCUUCUGAGUUUUGAGUUUGAGC	26	1	180	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5902985-5903417	Cluster_2264	Pocillopora_meandrina_HIv1___Sc0000006	5902985	5903417	433	228	88	1.0	+	UGAAGACAAGGAGAUUGUUGAUGACGUCCGC	23	0	223	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5905241-5905671	Cluster_2265	Pocillopora_meandrina_HIv1___Sc0000006	5905241	5905671	431	186	85	0.9838709677419355	+	UGGAUUUUCAAUUGAUUCUCGAAAUGUUUGG	29	3	180	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5905755-5906180	Cluster_2266	Pocillopora_meandrina_HIv1___Sc0000006	5905755	5906180	426	261	123	0.9885057471264368	+	UCUGACUGAUUACUGCUGUUUCCACUGC	26	7	249	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5907034-5907472	Cluster_2267	Pocillopora_meandrina_HIv1___Sc0000006	5907034	5907472	439	238	91	1.0	+	UCUUCAGACUUAACUUAGCUAUGAUCUCGA	31	4	234	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5908778-5909395	Cluster_2268	Pocillopora_meandrina_HIv1___Sc0000006	5908778	5909395	618	345	148	1.0	+	UUUCCAUUGCUUGAACUUGCCGGUUUU	28	6	324	0	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5910610-5911029	Cluster_2269	Pocillopora_meandrina_HIv1___Sc0000006	5910610	5911029	420	262	165	0.09923664122137404	-	UCAAAGUCCAGUAUCCUCUGCGAGUCAGA	11	43	112	10	15	38	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5917575-5918268	Cluster_2270	Pocillopora_meandrina_HIv1___Sc0000006	5917575	5918268	694	1188	199	0.9932659932659933	+	UAGAUUGGAGGAAACUCUUUCUGGCGGG	307	11	1134	1	9	19	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5920058-5921204	Cluster_2271	Pocillopora_meandrina_HIv1___Sc0000006	5920058	5921204	1147	973	399	0.8232271325796505	+	UACCACGUCUAGCUCCUCGUGCUCGCU	44	7	859	4	17	53	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5922443-5923664	Cluster_2272	Pocillopora_meandrina_HIv1___Sc0000006	5922443	5923664	1222	2080	512	0.8	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	490	15	1973	7	15	21	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5926582-5927199	Cluster_2273	Pocillopora_meandrina_HIv1___Sc0000006	5926582	5927199	618	684	259	0.7090643274853801	.	UAAAUUGCCAUGUCUAGUAGACCUAUU	33	6	634	7	11	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5927210-5927773	Cluster_2274	Pocillopora_meandrina_HIv1___Sc0000006	5927210	5927773	564	566	224	0.8003533568904594	+	UAAUUUAUCCAUGUAUUCUUGAAGACA	36	8	483	5	23	28	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5928645-5929444	Cluster_2275	Pocillopora_meandrina_HIv1___Sc0000006	5928645	5929444	800	406	247	0.9137931034482759	+	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	15	5	372	3	3	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5929820-5930249	Cluster_2276	Pocillopora_meandrina_HIv1___Sc0000006	5929820	5930249	430	142	38	0.9929577464788732	+	UGCAAAACCAUGUACAGUCGAACCUUGAUU	45	4	134	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5930391-5930838	Cluster_2277	Pocillopora_meandrina_HIv1___Sc0000006	5930391	5930838	448	1882	190	1.0	+	UCCAUUCUGCUCCCACGGUUUGAGGACUUG	370	2	1878	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5931431-5931850	Cluster_2278	Pocillopora_meandrina_HIv1___Sc0000006	5931431	5931850	420	221	103	0.995475113122172	+	UGUCUUUAACUCUGCCCUAACAAUUCAGAA	21	11	196	6	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5932642-5933123	Cluster_2279	Pocillopora_meandrina_HIv1___Sc0000006	5932642	5933123	482	302	119	1.0	+	UCUGCAACGGACUUCUAAGGGGUAAAGGC	47	0	299	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5934311-5935770	Cluster_2280	Pocillopora_meandrina_HIv1___Sc0000006	5934311	5935770	1460	1214	510	0.9975288303130149	+	UGACUUCAUCUGAUCAGUGUUGGUAGAUA	44	26	1135	6	22	8	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5936236-5937077	Cluster_2281	Pocillopora_meandrina_HIv1___Sc0000006	5936236	5937077	842	977	367	1.0	+	UAUAACAGACUCUGCACCUCUUCUGAGC	45	6	955	2	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5940921-5941459	Cluster_2282	Pocillopora_meandrina_HIv1___Sc0000006	5940921	5941459	539	8293	403	1.0	+	UGUGUCGAGCUUCUCUUGUAGCAGGAGU	3177	84	8085	0	65	27	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5941835-5942272	Cluster_2283	Pocillopora_meandrina_HIv1___Sc0000006	5941835	5942272	438	6806	246	0.9989714957390537	+	UUCUGCUGUUUUGGGCUUGCUUUGCCAUC	3792	33	6715	6	15	20	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5947100-5947529	Cluster_2284	Pocillopora_meandrina_HIv1___Sc0000006	5947100	5947529	430	309	36	1.0	+	UCAAACCUUGGCUUGAAUUACCUAUGCACA	190	1	308	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5948137-5948642	Cluster_2285	Pocillopora_meandrina_HIv1___Sc0000006	5948137	5948642	506	6910	359	0.998986975397974	+	UGCUUGAUCCUGCUGUAUCUUUUGAAGGGC	2343	2	6862	4	11	20	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5948646-5949062	Cluster_2286	Pocillopora_meandrina_HIv1___Sc0000006	5948646	5949062	417	200	105	1.0	+	UGUCUGAUCUUCUCCUAGAAACAUUUUAGC	12	0	194	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5952244-5952687	Cluster_2287	Pocillopora_meandrina_HIv1___Sc0000006	5952244	5952687	444	262	79	0.06870229007633588	-	ACGUGUAAGAUCAAGGAAGACAUGUUGAUU	58	3	234	1	3	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5956512-5956930	Cluster_2288	Pocillopora_meandrina_HIv1___Sc0000006	5956512	5956930	419	272	154	1.0	+	UCUAGAUUCUGGAUUUGCCUGUUCGUCU	19	2	255	4	6	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5959619-5960273	Cluster_2289	Pocillopora_meandrina_HIv1___Sc0000006	5959619	5960273	655	1132	210	0.9257950530035336	+	UAAGUUGAGAGGUCAUAGUAACAUUAGC	139	11	1032	4	7	16	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5960956-5961384	Cluster_2290	Pocillopora_meandrina_HIv1___Sc0000006	5960956	5961384	429	179	57	0.994413407821229	+	UAGGAUUUCUGUAGCUUGACAAGUUGUAG	45	5	167	3	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5962707-5963129	Cluster_2291	Pocillopora_meandrina_HIv1___Sc0000006	5962707	5963129	423	86	24	1.0	+	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	28	0	85	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5963561-5963977	Cluster_2292	Pocillopora_meandrina_HIv1___Sc0000006	5963561	5963977	417	194	96	0.979381443298969	+	UCGGACAUAAAUACGAUCCAUCAUU	19	1	186	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5970547-5971262	Cluster_2293	Pocillopora_meandrina_HIv1___Sc0000006	5970547	5971262	716	311	130	1.0	+	UUCAACGUUAUUUGUCUGGGUCUUUACAGC	36	4	303	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5973250-5973678	Cluster_2294	Pocillopora_meandrina_HIv1___Sc0000006	5973250	5973678	429	318	51	1.0	+	UGGGUCUGUGAUUAUGAAGAUGAAAUUC	104	1	312	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5974845-5975816	Cluster_2295	Pocillopora_meandrina_HIv1___Sc0000006	5974845	5975816	972	1146	331	0.9982547993019197	+	UGUAAAAUCUUUUAGGUCUGGCCCUUAUG	169	26	1094	4	4	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5977131-5977728	Cluster_2296	Pocillopora_meandrina_HIv1___Sc0000006	5977131	5977728	598	480	155	1.0	+	UGUAAACAUCUAAUAACUCCUGCGGAGCAGC	68	2	463	0	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5977885-5978419	Cluster_2297	Pocillopora_meandrina_HIv1___Sc0000006	5977885	5978419	535	341	107	0.9882697947214076	+	UCAAACAUUCUUCUGCUCGACUUACUGGC	42	5	320	5	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5978605-5979573	Cluster_2298	Pocillopora_meandrina_HIv1___Sc0000006	5978605	5979573	969	4450	549	0.9788764044943821	+	UCUACCUUAAAUCCCAACUGAUUGCUUUGU	672	53	3973	327	31	25	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5979723-5980153	Cluster_2299	Pocillopora_meandrina_HIv1___Sc0000006	5979723	5980153	431	648	88	0.9953703703703703	+	UGUGUGUUCUAACAGGGUGAUUACUAUAUC	276	26	599	1	2	1	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5982239-5983370	Cluster_2300	Pocillopora_meandrina_HIv1___Sc0000006	5982239	5983370	1132	1475	396	0.5383050847457627	.	ACUGAGAUUCUGGCUGGAUUGUUCCACU	171	14	1358	2	9	37	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5983705-5984819	Cluster_2301	Pocillopora_meandrina_HIv1___Sc0000006	5983705	5984819	1115	16897	1547	0.20690063324850566	.	AAAGAUCUGAACCGACGAAUAGUGUAUGGC	2863	106	15667	36	83	202	803	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5990660-5991085	Cluster_2302	Pocillopora_meandrina_HIv1___Sc0000006	5990660	5991085	426	130	56	0.9923076923076923	+	GAUGAAUGGAGAAACGAUAUGACAAC	29	2	71	2	7	6	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6006867-6007294	Cluster_2303	Pocillopora_meandrina_HIv1___Sc0000006	6006867	6007294	428	372	182	1.0	+	UGAUGCUUUCUAGAUGCUGUAACCAAAAC	27	4	353	0	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6007533-6008373	Cluster_2304	Pocillopora_meandrina_HIv1___Sc0000006	6007533	6008373	841	850	363	0.9929411764705882	+	UGUGUCUUGUUGUAACAAUUGUUGCUUUC	43	16	804	1	3	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6008959-6011701	Cluster_2305	Pocillopora_meandrina_HIv1___Sc0000006	6008959	6011701	2743	9613	1957	0.9781545823364194	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1533	50	9207	29	62	104	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6012823-6014174	Cluster_2306	Pocillopora_meandrina_HIv1___Sc0000006	6012823	6014174	1352	1423	446	0.9985945186226283	+	UGUAUACGUAGUGUCCGAUCUAAAUCCUGA	122	4	1399	3	4	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6014788-6015198	Cluster_2307	Pocillopora_meandrina_HIv1___Sc0000006	6014788	6015198	411	232	148	1.0	+	UCAUCUUCAGAAGACUUCUCCGACACUGC	16	1	226	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6016384-6016836	Cluster_2308	Pocillopora_meandrina_HIv1___Sc0000006	6016384	6016836	453	235	61	0.9063829787234042	+	UGGAUUUUAAAUCGUACAUACCUUCUUA	48	0	210	4	7	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6018479-6018907	Cluster_2309	Pocillopora_meandrina_HIv1___Sc0000006	6018479	6018907	429	392	167	0.826530612244898	+	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	113	3	355	2	9	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6019579-6022030	Cluster_2310	Pocillopora_meandrina_HIv1___Sc0000006	6019579	6022030	2452	12218	3017	0.9603863152725487	+	UGAGGACUUUUCAAAUUUAGCUACAGAUU	476	114	11065	78	102	218	641	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6023232-6024969	Cluster_2311	Pocillopora_meandrina_HIv1___Sc0000006	6023232	6024969	1738	2836	1118	0.9446403385049366	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	105	19	2689	10	25	57	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6031801-6032228	Cluster_2312	Pocillopora_meandrina_HIv1___Sc0000006	6031801	6032228	428	183	73	1.0	+	UCAUUGCGUUGCAUCUUCAGACUUAACUUA	25	5	172	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6032361-6032928	Cluster_2313	Pocillopora_meandrina_HIv1___Sc0000006	6032361	6032928	568	437	200	0.9038901601830663	+	UGUGGUAGACUUGUUUUUGACAUGGCA	37	13	390	11	5	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6042598-6043627	Cluster_2314	Pocillopora_meandrina_HIv1___Sc0000006	6042598	6043627	1030	597	206	0.9949748743718593	+	UCGUUUGUUCCGAGGAUAAGAUGUACA	89	7	580	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6044864-6045288	Cluster_2315	Pocillopora_meandrina_HIv1___Sc0000006	6044864	6045288	425	159	69	1.0	+	UAGGUUAUUGGCAGUGUCUCUUCGAAAAGA	28	3	147	1	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6045497-6046369	Cluster_2316	Pocillopora_meandrina_HIv1___Sc0000006	6045497	6046369	873	536	163	0.9981343283582089	+	CUCUGCUGACUGCAGGACCUUCCUUGC	129	1	519	2	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6067017-6067447	Cluster_2317	Pocillopora_meandrina_HIv1___Sc0000006	6067017	6067447	431	885	169	1.0	+	UUCCUGUACGAUAACACUUAGGUUGCGCA	135	92	756	10	14	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6069995-6070787	Cluster_2318	Pocillopora_meandrina_HIv1___Sc0000006	6069995	6070787	793	1087	376	0.921803127874885	+	UGCGUGACGAUCAAGAACUUGAGAGAGUGU	134	15	1005	8	11	19	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6071058-6072233	Cluster_2319	Pocillopora_meandrina_HIv1___Sc0000006	6071058	6072233	1176	2588	521	0.6228748068006182	.	GAUCUCUUGAAAUGUUCGGAAUUAUGUGG	284	148	2342	37	5	28	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6120475-6121887	Cluster_2320	Pocillopora_meandrina_HIv1___Sc0000006	6120475	6121887	1413	1481	381	0.002025658338960162	-	UACUCUUCGCCAGACGUUUUCCGUACCGAU	148	25	1406	10	14	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6207674-6208092	Cluster_2321	Pocillopora_meandrina_HIv1___Sc0000006	6207674	6208092	419	387	16	0.0	-	AACUUUUGACGGUGGGUCA	95	387	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6278811-6279259	Cluster_2322	Pocillopora_meandrina_HIv1___Sc0000006	6278811	6279259	449	1008	146	0.4107142857142857	.	UUCUAGCUCGACUUCACGCU	208	489	48	125	316	24	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6286308-6286741	Cluster_2323	Pocillopora_meandrina_HIv1___Sc0000006	6286308	6286741	434	666	180	0.0	-	UGUGUUGCAAUGGCGACGAACAUUG	175	23	568	17	12	15	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6499330-6499750	Cluster_2324	Pocillopora_meandrina_HIv1___Sc0000006	6499330	6499750	421	92	48	0.0	-	UCAGUAAGGAUGGAAACUCUUGGA	13	3	43	5	5	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6766538-6766959	Cluster_2325	Pocillopora_meandrina_HIv1___Sc0000006	6766538	6766959	422	191	113	0.08376963350785341	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	36	5	178	0	2	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6768801-6769851	Cluster_2326	Pocillopora_meandrina_HIv1___Sc0000006	6768801	6769851	1051	720	346	0.7569444444444444	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	25	11	675	3	3	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6770111-6770541	Cluster_2327	Pocillopora_meandrina_HIv1___Sc0000006	6770111	6770541	431	644	210	0.9006211180124224	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	99	8	557	1	2	4	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6812238-6812661	Cluster_2328	Pocillopora_meandrina_HIv1___Sc0000006	6812238	6812661	424	90	44	0.9666666666666667	+	UCCCACAUGGUCUAGUGGUUAGGAUUCA	16	12	69	3	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6838768-6839198	Cluster_2329	Pocillopora_meandrina_HIv1___Sc0000006	6838768	6839198	431	689	99	0.0	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	188	31	639	3	9	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6858520-6858950	Cluster_2330	Pocillopora_meandrina_HIv1___Sc0000006	6858520	6858950	431	420	88	1.0	+	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	111	21	382	0	14	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7024118-7024547	Cluster_2331	Pocillopora_meandrina_HIv1___Sc0000006	7024118	7024547	430	258	52	0.007751937984496124	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	84	0	257	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7083119-7083522	Cluster_2332	Pocillopora_meandrina_HIv1___Sc0000006	7083119	7083522	404	181	130	0.0	-	CUUGUUGGAAAAUAUGGCGGU	9	31	77	24	21	20	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7261372-7261772	Cluster_2333	Pocillopora_meandrina_HIv1___Sc0000006	7261372	7261772	401	157	127	0.006369426751592357	-	GUAUUUUAAAUUGUGAACGGUUU	3	25	58	14	20	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7264399-7264808	Cluster_2334	Pocillopora_meandrina_HIv1___Sc0000006	7264399	7264808	410	328	245	0.003048780487804878	-	CACCGAAGGAGCCGAAUUGGUAGACU	5	61	145	29	26	34	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7265080-7265496	Cluster_2335	Pocillopora_meandrina_HIv1___Sc0000006	7265080	7265496	417	137	115	0.0	-	UUCAUCUUCAGGCUGGCC	3	37	61	7	14	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7496273-7496769	Cluster_2336	Pocillopora_meandrina_HIv1___Sc0000006	7496273	7496769	497	632	203	0.6534810126582279	.	UGCGAUUACAGAGGUGCGUUGGAACUCC	152	21	578	7	8	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7599352-7599934	Cluster_2337	Pocillopora_meandrina_HIv1___Sc0000006	7599352	7599934	583	479	228	0.9958246346555324	+	UGUUUGUAGCACGUCCAGUCUGUUGGAGC	32	13	439	1	5	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7600647-7601067	Cluster_2338	Pocillopora_meandrina_HIv1___Sc0000006	7600647	7601067	421	152	92	1.0	+	UGUGUGUUGGAUCCGAGCUCGUAUACACC	8	4	142	1	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7637910-7638338	Cluster_2339	Pocillopora_meandrina_HIv1___Sc0000006	7637910	7638338	429	143	49	0.006993006993006993	-	UGUAUCUUCAGUAUCUUCGUCGCCAGAGC	44	2	138	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7689856-7690284	Cluster_2340	Pocillopora_meandrina_HIv1___Sc0000006	7689856	7690284	429	85	20	0.047058823529411764	-	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	48	0	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7697228-7697657	Cluster_2341	Pocillopora_meandrina_HIv1___Sc0000006	7697228	7697657	430	183	70	0.0	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	22	3	172	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7786884-7787312	Cluster_2342	Pocillopora_meandrina_HIv1___Sc0000006	7786884	7787312	429	313	199	0.009584664536741214	-	CUCUUGUUGACGGUCUGAAGAGAGCAACA	50	53	167	28	23	24	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7908829-7909247	Cluster_2343	Pocillopora_meandrina_HIv1___Sc0000006	7908829	7909247	419	146	67	0.0	-	GAUAUUCUUGAUUCUGAAAACA	16	51	40	8	27	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7910927-7911409	Cluster_2344	Pocillopora_meandrina_HIv1___Sc0000006	7910927	7911409	483	2736	425	0.0	-	CCAUGUUGGUGUGGUCUGAUGAACUGAAAGU	207	434	1545	245	266	140	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7912046-7912476	Cluster_2345	Pocillopora_meandrina_HIv1___Sc0000006	7912046	7912476	431	448	107	0.0	-	UUCAGUGUUGAACUGUUCACAUUCUGAAAA	115	73	335	23	8	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7912843-7913321	Cluster_2346	Pocillopora_meandrina_HIv1___Sc0000006	7912843	7913321	479	3039	377	0.0006581112207963146	-	ACCUAAUGAUGUUUGGUCUGAUGAACUGAAA	324	155	2429	95	66	90	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8391070-8391499	Cluster_2347	Pocillopora_meandrina_HIv1___Sc0000006	8391070	8391499	430	2136	92	0.0	-	UUCUCUCGAACAUUUUACUAUUUAGGUACC	707	11	1991	1	1	130	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8533930-8534360	Cluster_2348	Pocillopora_meandrina_HIv1___Sc0000006	8533930	8534360	431	155	50	0.05806451612903226	-	UCGAUUCCGCGAUGACUACAAUACGUUCUGC	46	5	146	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8556144-8556574	Cluster_2349	Pocillopora_meandrina_HIv1___Sc0000006	8556144	8556574	431	276	196	0.0	-	GGCAGAACUAUGUAAGAACAU	10	56	119	30	17	30	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8844897-8845325	Cluster_2350	Pocillopora_meandrina_HIv1___Sc0000006	8844897	8845325	429	520	23	0.9980769230769231	+	UCGGUUCUUAAAAAAAAAAAAAAAAAA	114	1	462	6	2	9	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8888820-8889249	Cluster_2351	Pocillopora_meandrina_HIv1___Sc0000006	8888820	8889249	430	92	10	0.010869565217391304	-	UGAUAAUCCAAAUUCUUGCGCCUACACAUU	73	1	90	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9039512-9039983	Cluster_2352	Pocillopora_meandrina_HIv1___Sc0000006	9039512	9039983	472	395	77	0.9974683544303797	+	GAGGGUCAUGGGUUCAGGUCCCAUAUCGGGC	77	101	250	9	21	13	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9046560-9046990	Cluster_2353	Pocillopora_meandrina_HIv1___Sc0000006	9046560	9046990	431	2720	216	0.0	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	860	182	2399	6	88	27	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9050433-9050859	Cluster_2354	Pocillopora_meandrina_HIv1___Sc0000006	9050433	9050859	427	231	55	1.0	+	GUGCUGAUAACGCCGAGGUCGAGAGUU	43	43	97	19	14	24	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9100146-9100615	Cluster_2355	Pocillopora_meandrina_HIv1___Sc0000006	9100146	9100615	470	3100	826	0.0035483870967741938	-	GUUUAUCCGAGGCGCGGUUAUUGCUGA	90	864	1201	235	209	234	357	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9100951-9101407	Cluster_2356	Pocillopora_meandrina_HIv1___Sc0000006	9100951	9101407	457	397	133	1.0	+	UAUUGACUUUUAAAUUUCUCCAGAACGGUG	36	14	337	7	6	10	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9202498-9202981	Cluster_2357	Pocillopora_meandrina_HIv1___Sc0000006	9202498	9202981	484	3221	291	1.0	+	UGCCCAAUGAUUAUCUAUGUUGAACACU	518	679	2171	56	125	69	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9311554-9311977	Cluster_2358	Pocillopora_meandrina_HIv1___Sc0000006	9311554	9311977	424	340	44	0.0	-	UGUCUAUUCCAGGUAACCUCUGAU	170	5	49	13	2	31	240	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9416139-9416555	Cluster_2359	Pocillopora_meandrina_HIv1___Sc0000006	9416139	9416555	417	115	22	0.0	-	UUUUGUUCUAAGAUUUGU	33	101	0	14	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9517732-9518155	Cluster_2360	Pocillopora_meandrina_HIv1___Sc0000006	9517732	9518155	424	535	22	1.0	+	AGUUUUGGUGUUCUUCUGUGUG	303	18	45	2	407	32	31	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9565153-9565579	Cluster_2361	Pocillopora_meandrina_HIv1___Sc0000006	9565153	9565579	427	188	106	0.8457446808510638	+	UGAGUCGAGGUUAUUCACAAUACGAGC	34	6	147	3	7	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9591535-9591944	Cluster_2362	Pocillopora_meandrina_HIv1___Sc0000006	9591535	9591944	410	89	36	0.4606741573033708	.	CCAAGUUCUACUUCAGGACAAGGGACGAG	20	3	83	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9632564-9632985	Cluster_2363	Pocillopora_meandrina_HIv1___Sc0000006	9632564	9632985	422	133	20	0.9924812030075187	+	AGUUUUGGUGUCCUCCUCUGUG	48	1	48	5	75	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9643302-9643719	Cluster_2364	Pocillopora_meandrina_HIv1___Sc0000006	9643302	9643719	418	81	25	0.024691358024691357	-	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	18	3	75	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9708117-9708566	Cluster_2365	Pocillopora_meandrina_HIv1___Sc0000006	9708117	9708566	450	321	141	0.9096573208722741	+	AGUUGACAUAUUGACUGGUACAAACAAGGG	44	21	217	11	12	19	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9738231-9738656	Cluster_2366	Pocillopora_meandrina_HIv1___Sc0000006	9738231	9738656	426	218	88	0.6743119266055045	.	UUGGAACGUGUUGCUGAACGCUUGCU	22	20	186	1	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9755350-9755777	Cluster_2367	Pocillopora_meandrina_HIv1___Sc0000006	9755350	9755777	428	94	25	1.0	+	UCAGAUUAUGGAACCGCCAACUUUAUGC	21	3	79	2	5	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9755872-9756301	Cluster_2368	Pocillopora_meandrina_HIv1___Sc0000006	9755872	9756301	430	281	33	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	109	0	277	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9769645-9770074	Cluster_2369	Pocillopora_meandrina_HIv1___Sc0000006	9769645	9770074	430	312	40	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	122	1	307	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9790713-9791956	Cluster_2370	Pocillopora_meandrina_HIv1___Sc0000006	9790713	9791956	1244	3348	876	0.045997610513739545	-	UCUUCGCUGAUUUCUUCCCACAGGGACU	246	14	3267	6	2	12	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9808992-9809420	Cluster_2371	Pocillopora_meandrina_HIv1___Sc0000006	9808992	9809420	429	269	31	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	103	0	266	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9830659-9831089	Cluster_2372	Pocillopora_meandrina_HIv1___Sc0000006	9830659	9831089	431	370	170	0.9756756756756757	+	UUGGAACUUCAGCUGUGAGACGCAGGU	16	8	323	3	6	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9833547-9833990	Cluster_2373	Pocillopora_meandrina_HIv1___Sc0000006	9833547	9833990	444	911	206	0.5784851811196488	.	CCUGAUCGUAAAGACAAACUGCGUG	169	7	795	6	8	24	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9837502-9837929	Cluster_2374	Pocillopora_meandrina_HIv1___Sc0000006	9837502	9837929	428	182	49	0.9175824175824175	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	42	3	168	4	5	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9852912-9853356	Cluster_2375	Pocillopora_meandrina_HIv1___Sc0000006	9852912	9853356	445	403	121	0.09429280397022333	-	UGAGACAGUACACACGAUUUGAUAU	46	1	388	1	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9873510-9873939	Cluster_2376	Pocillopora_meandrina_HIv1___Sc0000006	9873510	9873939	430	290	33	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	105	0	284	1	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9887216-9887645	Cluster_2377	Pocillopora_meandrina_HIv1___Sc0000006	9887216	9887645	430	272	36	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	102	1	270	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9909109-9909538	Cluster_2378	Pocillopora_meandrina_HIv1___Sc0000006	9909109	9909538	430	304	37	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	104	1	295	1	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9926159-9926587	Cluster_2379	Pocillopora_meandrina_HIv1___Sc0000006	9926159	9926587	429	235	24	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	100	0	233	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10020802-10021223	Cluster_2380	Pocillopora_meandrina_HIv1___Sc0000006	10020802	10021223	422	73	25	0.0136986301369863	-	AGUUUUGGUGUUCUUCUUUGUGAGAUGUC	22	2	53	0	8	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10280429-10280841	Cluster_2381	Pocillopora_meandrina_HIv1___Sc0000006	10280429	10280841	413	70	30	0.6285714285714286	.	UGUCAGACUCGUCGGAAGAAGAAUCACG	8	0	65	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10292064-10292481	Cluster_2382	Pocillopora_meandrina_HIv1___Sc0000006	10292064	10292481	418	93	19	0.946236559139785	+	UGAACUACUGCUCGUACUCUAGAUAGG	29	44	41	3	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10393246-10393675	Cluster_2383	Pocillopora_meandrina_HIv1___Sc0000006	10393246	10393675	430	212	42	1.0	+	UGCAAAGAUGUCAGUCAAGAAUAGCCGAGC	78	1	207	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10650628-10651049	Cluster_2384	Pocillopora_meandrina_HIv1___Sc0000006	10650628	10651049	422	90	37	0.044444444444444446	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	17	1	83	4	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10713315-10713742	Cluster_2385	Pocillopora_meandrina_HIv1___Sc0000006	10713315	10713742	428	166	60	0.963855421686747	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	43	1	157	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10793624-10794051	Cluster_2386	Pocillopora_meandrina_HIv1___Sc0000006	10793624	10794051	428	106	26	0.05660377358490566	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	30	4	100	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10813241-10813671	Cluster_2387	Pocillopora_meandrina_HIv1___Sc0000006	10813241	10813671	431	141	60	0.9645390070921985	+	UGUUUACUUUCUUUACAACUUCGGAUACGUG	31	0	137	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10896001-10896432	Cluster_2388	Pocillopora_meandrina_HIv1___Sc0000006	10896001	10896432	432	2806	126	0.011047754811119031	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2119	4	2767	18	9	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10969064-10969550	Cluster_2389	Pocillopora_meandrina_HIv1___Sc0000006	10969064	10969550	487	273	99	0.4249084249084249	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	50	17	241	3	8	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11034947-11035389	Cluster_2390	Pocillopora_meandrina_HIv1___Sc0000006	11034947	11035389	443	272	133	1.0	+	GUUUAUCCGAGGCGCGGUUAUUGCUGA	25	98	83	21	20	27	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11092821-11093342	Cluster_2391	Pocillopora_meandrina_HIv1___Sc0000006	11092821	11093342	522	191	50	0.041884816753926704	-	UCAACAUGUCUUCCUUUGUCUUACACGUG	46	0	190	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11121673-11122194	Cluster_2392	Pocillopora_meandrina_HIv1___Sc0000006	11121673	11122194	522	226	73	0.05752212389380531	-	UCAACAUGUCUUCCUUUGUCUUACACGUG	51	1	221	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11148434-11149390	Cluster_2393	Pocillopora_meandrina_HIv1___Sc0000006	11148434	11149390	957	2290	335	0.036244541484716154	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	354	3	2212	2	7	43	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11166872-11167506	Cluster_2394	Pocillopora_meandrina_HIv1___Sc0000006	11166872	11167506	635	7854	543	0.06735421441303795	-	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	4128	30	7656	22	4	36	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11167824-11168376	Cluster_2395	Pocillopora_meandrina_HIv1___Sc0000006	11167824	11168376	553	248	83	0.07258064516129033	-	UAUACUCCAAAGGUUCUGAAAACGAAUG	45	2	221	2	1	17	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11206362-11206836	Cluster_2396	Pocillopora_meandrina_HIv1___Sc0000006	11206362	11206836	475	7219	622	0.9882255159994459	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	3006	372	6505	110	109	80	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11370986-11371535	Cluster_2397	Pocillopora_meandrina_HIv1___Sc0000006	11370986	11371535	550	706	241	0.1388101983002833	-	UGUAAGAUCUGUAGCCUUGGUUUGCCGAC	86	39	594	14	10	19	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11373785-11374213	Cluster_2398	Pocillopora_meandrina_HIv1___Sc0000006	11373785	11374213	429	347	141	0.0	-	UCUUUCUUAAAACGGAACGUGUACUUGAA	36	5	330	3	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11375457-11375960	Cluster_2399	Pocillopora_meandrina_HIv1___Sc0000006	11375457	11375960	504	1144	279	0.0034965034965034965	-	UCCGACUCGUGCGACACGACAUCUCUUGAU	151	6	1116	2	3	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11376313-11378565	Cluster_2400	Pocillopora_meandrina_HIv1___Sc0000006	11376313	11378565	2253	114526	2967	0.003937970417197841	-	UGAUCUUCUUGAAUUUGCCCAUUUACAAUA	27036	270	112258	85	177	794	942	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11378588-11379259	Cluster_2401	Pocillopora_meandrina_HIv1___Sc0000006	11378588	11379259	672	1828	293	0.00437636761487965	-	UGAUUCUUUGACAGUUAACCCUAGUAG	228	10	1580	85	27	115	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11380054-11381266	Cluster_2402	Pocillopora_meandrina_HIv1___Sc0000006	11380054	11381266	1213	2762	645	0.018102824040550327	-	UCAAGAUCUUCCUCUUUGUCGUACCCGGA	443	24	2628	6	37	40	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11381552-11382373	Cluster_2403	Pocillopora_meandrina_HIv1___Sc0000006	11381552	11382373	822	563	221	0.0017761989342806395	-	UGGCCAUUCAUCUAUUGAAAUGAACUUCGAU	127	14	530	2	4	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11384910-11385866	Cluster_2404	Pocillopora_meandrina_HIv1___Sc0000006	11384910	11385866	957	1151	394	0.0034752389226759338	-	UCUGAUUUGGUAAUUGACUUGGCUGGUC	60	13	1061	2	20	18	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11385947-11386666	Cluster_2405	Pocillopora_meandrina_HIv1___Sc0000006	11385947	11386666	720	307	124	0.0	-	UCUUGAAAUUCUAGACUCUUGGAAAUGCA	57	1	299	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11389022-11390065	Cluster_2406	Pocillopora_meandrina_HIv1___Sc0000006	11389022	11390065	1044	6990	713	0.013304721030042918	-	UGCACUCUUUCCUUGAGAAGUUCCUGGAA	2685	120	6697	36	25	25	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11390317-11390721	Cluster_2407	Pocillopora_meandrina_HIv1___Sc0000006	11390317	11390721	405	189	96	0.0	-	UAUUAUCUGUGGCAACUUGUUUUCUAUC	13	8	175	3	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11390733-11391386	Cluster_2408	Pocillopora_meandrina_HIv1___Sc0000006	11390733	11391386	654	1926	361	0.009345794392523364	-	UAAAAUCCGAAAAAUUCGAAAUGGAAGGCUG	1150	20	1853	8	5	19	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11393309-11393718	Cluster_2409	Pocillopora_meandrina_HIv1___Sc0000006	11393309	11393718	410	176	75	0.36363636363636365	.	UCCAUACAAACACAGUAAAUUGGCCGAA	17	2	160	1	0	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11430683-11431107	Cluster_2410	Pocillopora_meandrina_HIv1___Sc0000006	11430683	11431107	425	235	55	0.00425531914893617	-	CGGUGACAAAUAUCAACUAUGGCA	47	15	85	11	2	61	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11491586-11492016	Cluster_2411	Pocillopora_meandrina_HIv1___Sc0000006	11491586	11492016	431	811	88	0.935881627620222	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	303	10	788	2	3	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11542304-11543575	Cluster_2412	Pocillopora_meandrina_HIv1___Sc0000006	11542304	11543575	1272	1260	501	0.08015873015873017	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	82	19	1179	10	5	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11544445-11544872	Cluster_2413	Pocillopora_meandrina_HIv1___Sc0000006	11544445	11544872	428	146	51	0.0410958904109589	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	65	2	142	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11544956-11545435	Cluster_2414	Pocillopora_meandrina_HIv1___Sc0000006	11544956	11545435	480	334	137	0.10479041916167664	-	UCCAAUCACACACAGUUCUCCUGCGGC	86	1	322	4	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11545757-11546165	Cluster_2415	Pocillopora_meandrina_HIv1___Sc0000006	11545757	11546165	409	215	89	0.06511627906976744	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	21	1	201	1	1	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11581144-11581561	Cluster_2416	Pocillopora_meandrina_HIv1___Sc0000006	11581144	11581561	418	85	19	0.047058823529411764	-	CCCGGGUCUCGGCACCAG	31	83	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11672348-11672776	Cluster_2417	Pocillopora_meandrina_HIv1___Sc0000006	11672348	11672776	429	141	71	0.0	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	34	6	121	7	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11677885-11678302	Cluster_2418	Pocillopora_meandrina_HIv1___Sc0000006	11677885	11678302	418	91	43	0.10989010989010989	-	UCAGAGCAAGAACGACCCCU	19	67	12	8	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11680009-11680439	Cluster_2419	Pocillopora_meandrina_HIv1___Sc0000006	11680009	11680439	431	299	132	0.05351170568561873	-	UAACUGUACUCUUGAAAUUCAUCGAUGC	16	2	285	1	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11680455-11680882	Cluster_2420	Pocillopora_meandrina_HIv1___Sc0000006	11680455	11680882	428	219	118	0.1187214611872146	-	UACUGAUAGUGAAACUGCUCCUUGAACC	13	1	210	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11683538-11683967	Cluster_2421	Pocillopora_meandrina_HIv1___Sc0000006	11683538	11683967	430	93	25	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	36	1	92	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11760004-11760609	Cluster_2422	Pocillopora_meandrina_HIv1___Sc0000006	11760004	11760609	606	2929	294	0.9832707408671901	+	UGAACCGUGCCGAUCUGCUGCCCUUUGA	675	8	2882	2	2	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11762420-11762901	Cluster_2423	Pocillopora_meandrina_HIv1___Sc0000006	11762420	11762901	482	465	70	0.7569892473118279	.	UCCGAAGCCUCGUUUGUAGUCG	108	4	230	1	223	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11811248-11811667	Cluster_2424	Pocillopora_meandrina_HIv1___Sc0000006	11811248	11811667	420	505	9	0.998019801980198	+	UUCCGAAUCUUCUAGUUAGC	401	458	1	37	8	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11830883-11831300	Cluster_2425	Pocillopora_meandrina_HIv1___Sc0000006	11830883	11831300	418	116	9	0.9482758620689655	+	GAUGGAUGGAGACUGCUU	105	111	4	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11993972-11994632	Cluster_2426	Pocillopora_meandrina_HIv1___Sc0000006	11993972	11994632	661	1418	203	0.9992947813822285	+	UUACAUUUGCGACUUCUUCAGAUUGCGAGC	264	39	1210	12	30	71	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12057156-12057627	Cluster_2427	Pocillopora_meandrina_HIv1___Sc0000006	12057156	12057627	472	821	203	0.9987819732034104	+	UGAGACGAAGCACACCGACAUUU	174	52	350	11	37	249	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12087516-12088787	Cluster_2428	Pocillopora_meandrina_HIv1___Sc0000006	12087516	12088787	1272	1313	524	0.08453922315308454	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	84	13	1238	5	7	17	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12089657-12090084	Cluster_2429	Pocillopora_meandrina_HIv1___Sc0000006	12089657	12090084	428	134	51	0.09701492537313433	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	54	0	126	2	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12090168-12090647	Cluster_2430	Pocillopora_meandrina_HIv1___Sc0000006	12090168	12090647	480	322	142	0.08695652173913043	-	UCCAAUCACACACAGUUCUCCUGCGGC	66	1	306	1	2	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12090969-12091621	Cluster_2431	Pocillopora_meandrina_HIv1___Sc0000006	12090969	12091621	653	1501	369	0.03664223850766156	-	UGUUACCGGUCUUGCUAACCACUUGGA	394	8	1416	4	9	12	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12175321-12175749	Cluster_2432	Pocillopora_meandrina_HIv1___Sc0000006	12175321	12175749	429	703	66	0.004267425320056899	-	UGAAGACUGGCCCUGAUAUCAUCAUAU	191	3	673	1	0	21	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12208553-12208974	Cluster_2433	Pocillopora_meandrina_HIv1___Sc0000006	12208553	12208974	422	89	22	0.8202247191011236	+	UACGCAGAGCGGAGCUCACAUACUAAGU	26	18	62	2	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12365265-12365693	Cluster_2434	Pocillopora_meandrina_HIv1___Sc0000006	12365265	12365693	429	85	24	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	48	0	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12369619-12370344	Cluster_2435	Pocillopora_meandrina_HIv1___Sc0000006	12369619	12370344	726	514	198	0.08560311284046693	-	UGUUUUGGUGUGUUCAAGUAUCUUUGA	33	3	491	4	3	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12374555-12375050	Cluster_2436	Pocillopora_meandrina_HIv1___Sc0000006	12374555	12375050	496	2248	182	0.2179715302491103	.	UCCAUCUGUCAGAAAUCCAAACAUGUCUUC	830	1	2208	4	7	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12376022-12376452	Cluster_2437	Pocillopora_meandrina_HIv1___Sc0000006	12376022	12376452	431	722	63	0.027700831024930747	-	UGAAAUGACGAUCACUGAUGAAUCCUUUGUC	327	8	682	11	2	14	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12377153-12377581	Cluster_2438	Pocillopora_meandrina_HIv1___Sc0000006	12377153	12377581	429	194	39	0.9845360824742269	+	AUCUUUCCGAGGCUCUGAGUGGG	48	0	79	12	20	72	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12377822-12378559	Cluster_2439	Pocillopora_meandrina_HIv1___Sc0000006	12377822	12378559	738	835	222	0.081437125748503	-	UCUACUUUGUUGGAUUCACACUGGAUCUUGU	245	8	762	5	9	17	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12380733-12383184	Cluster_2440	Pocillopora_meandrina_HIv1___Sc0000006	12380733	12383184	2452	11875	3003	0.04033684210526316	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	466	122	10790	68	91	183	621	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12383856-12384400	Cluster_2441	Pocillopora_meandrina_HIv1___Sc0000006	12383856	12384400	545	450	187	0.20222222222222222	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	107	12	398	9	9	13	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12391128-12391714	Cluster_2442	Pocillopora_meandrina_HIv1___Sc0000006	12391128	12391714	587	462	200	0.41125541125541126	.	UGAUUGAUGAUUGUGGCACCACCCGCAC	25	16	338	19	10	47	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12400733-12401399	Cluster_2443	Pocillopora_meandrina_HIv1___Sc0000006	12400733	12401399	667	3388	692	0.2618063754427391	.	UUUAUACCCAAUACGAUCUUAUCUCUGA	285	22	3219	6	10	61	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12401669-12402086	Cluster_2444	Pocillopora_meandrina_HIv1___Sc0000006	12401669	12402086	418	262	138	0.15648854961832062	-	UGAACUUAACGACACCUAGAUCUGCACAAGC	19	2	226	1	10	5	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12402282-12403351	Cluster_2445	Pocillopora_meandrina_HIv1___Sc0000006	12402282	12403351	1070	3010	634	0.09302325581395349	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	286	15	2852	7	14	28	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12403742-12404424	Cluster_2446	Pocillopora_meandrina_HIv1___Sc0000006	12403742	12404424	683	282	142	0.07092198581560284	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	38	2	262	7	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12407957-12408590	Cluster_2447	Pocillopora_meandrina_HIv1___Sc0000006	12407957	12408590	634	305	112	0.0	-	UCUAUUCUCAAGCUUUUUGUAGCCCGCUGAU	52	0	302	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12418249-12419391	Cluster_2448	Pocillopora_meandrina_HIv1___Sc0000006	12418249	12419391	1143	6761	1282	0.009761869545925159	-	UGUGCAUUCAGGUUUGUCAUUGUCAAUAAC	549	37	6402	18	88	144	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12419448-12420616	Cluster_2449	Pocillopora_meandrina_HIv1___Sc0000006	12419448	12420616	1169	2064	723	0.02180232558139535	-	UGGGAACAUCUUUGAAGUCAUUUUUAUG	94	26	1926	16	23	33	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12421403-12424171	Cluster_2450	Pocillopora_meandrina_HIv1___Sc0000006	12421403	12424171	2769	42858	3104	0.04932568015306361	-	UGAUCAUGGAUUCUAAACUGGUAAUGGCC	13055	548	40410	564	160	451	725	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12425669-12428587	Cluster_2451	Pocillopora_meandrina_HIv1___Sc0000006	12425669	12428587	2919	14255	2530	0.0001403016485443704	-	UUCAUUCUGAGCACGGACCCUCUUGGACGUU	1278	126	13292	42	434	56	305	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12428777-12429954	Cluster_2452	Pocillopora_meandrina_HIv1___Sc0000006	12428777	12429954	1178	692	367	0.0	-	UGAGAAGAUCUUUUAUUCGUCGCGGCCAUU	59	3	664	2	14	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12430075-12430838	Cluster_2453	Pocillopora_meandrina_HIv1___Sc0000006	12430075	12430838	764	357	141	0.0	-	UGGGUGUAGUGCUGAAUACUGCAGCAUU	75	6	344	0	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12430971-12431389	Cluster_2454	Pocillopora_meandrina_HIv1___Sc0000006	12430971	12431389	419	225	125	0.0	-	UAAGUUACACUGAUUUAACUCCUUUACA	12	2	222	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12431613-12432345	Cluster_2455	Pocillopora_meandrina_HIv1___Sc0000006	12431613	12432345	733	490	234	0.0	-	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	28	5	469	2	7	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12432474-12432909	Cluster_2456	Pocillopora_meandrina_HIv1___Sc0000006	12432474	12432909	436	398	149	0.002512562814070352	-	UGAAUCAUCACCGUCAUCUGCAGGUAGC	58	7	374	3	1	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12435659-12438616	Cluster_2457	Pocillopora_meandrina_HIv1___Sc0000006	12435659	12438616	2958	8068	2388	0.0017352503718393653	-	UUAGAUUUGUGCUUUCUUCAAGAGAACUUGG	386	101	7605	120	51	109	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12438875-12439562	Cluster_2458	Pocillopora_meandrina_HIv1___Sc0000006	12438875	12439562	688	8185	531	0.0002443494196701283	-	UGAACAACAACUGCAGCGAAUAAACA	721	118	7605	178	163	34	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12440581-12441849	Cluster_2459	Pocillopora_meandrina_HIv1___Sc0000006	12440581	12441849	1269	7775	1168	0.028938906752411574	-	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1453	58	7428	18	72	98	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12441900-12443319	Cluster_2460	Pocillopora_meandrina_HIv1___Sc0000006	12441900	12443319	1420	2545	903	0.003929273084479371	-	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	152	17	2465	2	16	25	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12444136-12444951	Cluster_2461	Pocillopora_meandrina_HIv1___Sc0000006	12444136	12444951	816	29405	1172	0.0002720625743921102	-	UAUUUCAGGCUUCUCAAACAUCAUGUGA	4734	519	28303	110	202	123	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12446807-12450450	Cluster_2462	Pocillopora_meandrina_HIv1___Sc0000006	12446807	12450450	3644	150198	6064	0.0006724457050027297	-	UACGUUGGCUUUGUAGAUUACCCUGGUG	13150	628	140624	3791	524	3058	1573	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12450615-12452430	Cluster_2463	Pocillopora_meandrina_HIv1___Sc0000006	12450615	12452430	1816	24746	3251	0.00036369514264931703	-	UCCGAACUCUUGGCUUCUUGGCUUUGCG	1119	189	23929	123	124	141	240	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12452455-12453488	Cluster_2464	Pocillopora_meandrina_HIv1___Sc0000006	12452455	12453488	1034	1170	543	0.0	-	UGUUAUUGAUUCGUUGCCCGGACUCAUGGC	35	44	1047	9	27	17	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12453604-12457216	Cluster_2465	Pocillopora_meandrina_HIv1___Sc0000006	12453604	12457216	3613	93752	3415	9.599795204368973e-05	-	UGUCCACCCCCCACCGGCUGUUUUUUGGUC	20408	914	90397	330	1040	369	702	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12457222-12458419	Cluster_2466	Pocillopora_meandrina_HIv1___Sc0000006	12457222	12458419	1198	2847	710	0.0	-	UGUAAAUUUAAAACUCUGAUAUCUUGUC	235	21	2740	8	18	30	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12458758-12460546	Cluster_2467	Pocillopora_meandrina_HIv1___Sc0000006	12458758	12460546	1789	48929	2097	0.0011240777453044206	-	UAAGUUGAAGAUUGUAGCAGAAGCAAAAGC	11549	318	47473	253	151	279	455	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12461223-12461652	Cluster_2468	Pocillopora_meandrina_HIv1___Sc0000006	12461223	12461652	430	196	78	0.02040816326530612	-	UUGGCGUCUGUGUCGCAUCUGUGUUGCAU	16	10	183	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12499946-12500349	Cluster_2469	Pocillopora_meandrina_HIv1___Sc0000006	12499946	12500349	404	102	51	0.0	-	GACAGACAGAACUUGAAUGGCCAAGUGUG	31	12	67	9	4	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12650102-12650528	Cluster_2470	Pocillopora_meandrina_HIv1___Sc0000006	12650102	12650528	427	151	50	0.9602649006622517	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	3	143	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12776187-12777736	Cluster_2471	Pocillopora_meandrina_HIv1___Sc0000006	12776187	12777736	1550	1305	554	0.9747126436781609	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	89	13	1246	6	7	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12779371-12780413	Cluster_2472	Pocillopora_meandrina_HIv1___Sc0000006	12779371	12780413	1043	834	358	0.9700239808153477	+	UAACAUCUCUCUUUCCGACUUUAACAGC	56	5	799	2	3	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12780550-12781543	Cluster_2473	Pocillopora_meandrina_HIv1___Sc0000006	12780550	12781543	994	1180	468	0.9033898305084745	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	84	12	1080	9	9	13	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12781662-12782153	Cluster_2474	Pocillopora_meandrina_HIv1___Sc0000006	12781662	12782153	492	495	275	0.8080808080808081	+	UGUUCCGGUACAAAUUUUCCCUGCAUA	16	4	424	3	4	16	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12792980-12793795	Cluster_2475	Pocillopora_meandrina_HIv1___Sc0000006	12792980	12793795	816	3089	758	0.06474587245063128	-	UCCGAUACAAUAACGCUGUAGCUUUU	468	63	2862	16	11	66	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12794758-12795434	Cluster_2476	Pocillopora_meandrina_HIv1___Sc0000006	12794758	12795434	677	448	252	0.033482142857142856	-	UAGAAAGGAUCCUCUUCGUCUCUUCCAGG	29	2	418	2	1	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12796401-12797081	Cluster_2477	Pocillopora_meandrina_HIv1___Sc0000006	12796401	12797081	681	2136	275	0.011235955056179775	-	UGUCAAAUUCAGGUUGUGUCAGGAGUCUGC	348	9	2066	0	2	42	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13037557-13038344	Cluster_2478	Pocillopora_meandrina_HIv1___Sc0000006	13037557	13038344	788	1831	445	0.9639541234298198	+	UGUAGAAUCAAUCUGUUACUAAGACACC	109	13	1731	16	10	23	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13104783-13105328	Cluster_2479	Pocillopora_meandrina_HIv1___Sc0000006	13104783	13105328	546	778	280	0.8046272493573264	+	UGCGUGUAAAAGCUGGUCUCAAGAACC	170	9	702	15	7	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13229818-13230240	Cluster_2480	Pocillopora_meandrina_HIv1___Sc0000006	13229818	13230240	423	266	56	0.22556390977443608	.	UGUGUUUGUGUAGAGUUUUGUGU	73	98	2	28	13	121	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13238438-13238854	Cluster_2481	Pocillopora_meandrina_HIv1___Sc0000006	13238438	13238854	417	204	114	0.7156862745098039	.	UUCCGCCAUGACUGUUAUUGU	15	103	30	44	5	19	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13376534-13376951	Cluster_2482	Pocillopora_meandrina_HIv1___Sc0000006	13376534	13376951	418	92	15	0.9782608695652174	+	ACUGCUGCCGGUCGUUGU	68	91	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13405970-13406383	Cluster_2483	Pocillopora_meandrina_HIv1___Sc0000006	13405970	13406383	414	77	23	0.0	-	GCACAGUCUGUAGAAGAUGACCCUGAGA	29	7	64	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13443605-13444156	Cluster_2484	Pocillopora_meandrina_HIv1___Sc0000006	13443605	13444156	552	205	73	0.9317073170731708	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	37	0	180	1	4	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13445396-13446616	Cluster_2485	Pocillopora_meandrina_HIv1___Sc0000006	13445396	13446616	1221	2035	491	0.8088452088452088	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	513	10	1924	2	10	27	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13851754-13852280	Cluster_2486	Pocillopora_meandrina_HIv1___Sc0000006	13851754	13852280	527	7761	1114	0.0005153975003221235	-	UCGUGCAAUUUUUGGAACCCUUA	640	610	3045	763	1523	1244	576	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13862228-13862730	Cluster_2487	Pocillopora_meandrina_HIv1___Sc0000006	13862228	13862730	503	290	148	1.0	+	UGACUCUUGAUAAGUUGUACUCUCCUAGG	15	5	279	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13863717-13864824	Cluster_2488	Pocillopora_meandrina_HIv1___Sc0000006	13863717	13864824	1108	36310	870	0.9979069126962269	+	UAAGAAAUCUUCCACUGAUCGUUGAGUU	7333	381	35233	74	69	180	373	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13865078-13865506	Cluster_2489	Pocillopora_meandrina_HIv1___Sc0000006	13865078	13865506	429	255	94	1.0	+	UGAGGAUGAUGACAUAGCAUAUUGAAGUU	28	5	244	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13867250-13870516	Cluster_2490	Pocillopora_meandrina_HIv1___Sc0000006	13867250	13870516	3267	80041	4394	0.9998875576267163	+	UGCACCAGUUUGACCGUGAUUGCUCGUUGG	6611	1818	75591	554	1033	508	537	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13870567-13871700	Cluster_2491	Pocillopora_meandrina_HIv1___Sc0000006	13870567	13871700	1134	2947	642	1.0	+	UUAUCAUAUGUCUCUGUAGUUUUUACAAC	345	16	2893	10	9	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13871763-13874376	Cluster_2492	Pocillopora_meandrina_HIv1___Sc0000006	13871763	13874376	2614	45151	4681	0.9893911541272619	+	UGCGCCAGUCUUGUUGUGAUUGUCUUUUGGA	3344	718	41428	287	537	865	1316	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13874405-13875001	Cluster_2493	Pocillopora_meandrina_HIv1___Sc0000006	13874405	13875001	597	386	58	0.9974093264248705	+	UGAUUUUUGGAUGCAUAAGAAAUGUACA	202	4	377	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13879584-13881610	Cluster_2494	Pocillopora_meandrina_HIv1___Sc0000006	13879584	13881610	2027	9521	2542	0.8173511185799811	+	UUCUUUCGAUUUUCUUGCAUUUUCUGA	177	123	8244	59	138	376	581	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13881926-13882351	Cluster_2495	Pocillopora_meandrina_HIv1___Sc0000006	13881926	13882351	426	99	35	1.0	+	UGACUCAGCUAGAGUGAACCAUUUGAAGC	19	0	98	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:14024001-14024428	Cluster_2496	Pocillopora_meandrina_HIv1___Sc0000006	14024001	14024428	428	229	46	1.0	+	UGGUUGGACAGUGUUCCAGAAGAGACUG	69	6	207	0	16	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:50715-51144	Cluster_2497	Pocillopora_meandrina_HIv1___Sc0000007	50715	51144	430	473	41	1.0	+	AACUACUGCUCGUACUCUAGAUAUGAC	115	5	465	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:611860-612428	Cluster_2498	Pocillopora_meandrina_HIv1___Sc0000007	611860	612428	569	349	109	0.6848137535816619	.	GCUUGAUGUACGCGAAAGAAAUUCGA	54	11	311	1	8	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:616352-617374	Cluster_2499	Pocillopora_meandrina_HIv1___Sc0000007	616352	617374	1023	2348	461	0.9518739352640545	+	UACGCUGAAAUUUCUGCUUGGGUAGAUG	343	38	2176	55	11	29	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:872994-873470	Cluster_2500	Pocillopora_meandrina_HIv1___Sc0000007	872994	873470	477	45698	607	0.0	-	GGGGAUGUAGCUCAGUGGU	14560	28194	12305	1259	648	757	2535	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:893772-894189	Cluster_2501	Pocillopora_meandrina_HIv1___Sc0000007	893772	894189	418	224	19	1.0	+	AUCGGCCGUGGAUUGGCU	163	219	2	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:969533-970234	Cluster_2502	Pocillopora_meandrina_HIv1___Sc0000007	969533	970234	702	263	131	0.9391634980988594	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	24	1	245	0	3	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:971464-971892	Cluster_2503	Pocillopora_meandrina_HIv1___Sc0000007	971464	971892	429	271	155	0.8782287822878229	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	29	1	247	0	3	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1122671-1123098	Cluster_2504	Pocillopora_meandrina_HIv1___Sc0000007	1122671	1123098	428	259	52	0.9498069498069498	+	UAUUAUUCAUCUGCUGUCUUUUUGCCUC	76	10	231	9	7	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1154912-1155450	Cluster_2505	Pocillopora_meandrina_HIv1___Sc0000007	1154912	1155450	539	2358	526	0.0008481764206955047	-	CCAAUUACUGAUAACUCAGACACUC	182	272	1418	179	126	125	238	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1526279-1526970	Cluster_2506	Pocillopora_meandrina_HIv1___Sc0000007	1526279	1526970	692	243	87	0.9917695473251029	+	UCCGUGUGUUUGUUUGGAUCAUAUCUACGC	28	4	224	3	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1783128-1783546	Cluster_2507	Pocillopora_meandrina_HIv1___Sc0000007	1783128	1783546	419	72	25	0.013888888888888888	-	UACCGUAGAACUUUCCAGAACAUU	22	2	36	0	0	1	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1823707-1824268	Cluster_2508	Pocillopora_meandrina_HIv1___Sc0000007	1823707	1824268	562	4317	439	0.960620801482511	+	UAGAGCUCUUGUUUUUUCCACAUCAAUA	1222	124	3902	14	138	55	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1836764-1837175	Cluster_2509	Pocillopora_meandrina_HIv1___Sc0000007	1836764	1837175	412	96	64	0.21875	.	UAUUGCUGAACAGACGCACG	11	48	15	11	12	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1884502-1885421	Cluster_2510	Pocillopora_meandrina_HIv1___Sc0000007	1884502	1885421	920	537	252	0.9553072625698324	+	UAGGUAAUGGCACAAACUGAGAGGCGUG	31	4	505	4	1	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1885503-1886313	Cluster_2511	Pocillopora_meandrina_HIv1___Sc0000007	1885503	1886313	811	583	343	0.9176672384219554	+	UGCAAGAAGUACUGGGUUCACUGAGACC	17	3	547	7	2	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1886403-1887596	Cluster_2512	Pocillopora_meandrina_HIv1___Sc0000007	1886403	1887596	1194	1290	521	0.9294573643410853	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	106	10	1197	5	5	26	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1925272-1925700	Cluster_2513	Pocillopora_meandrina_HIv1___Sc0000007	1925272	1925700	429	118	37	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	28	0	116	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1953727-1954156	Cluster_2514	Pocillopora_meandrina_HIv1___Sc0000007	1953727	1954156	430	222	46	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	64	3	217	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2004533-2004961	Cluster_2515	Pocillopora_meandrina_HIv1___Sc0000007	2004533	2004961	429	112	38	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	27	0	105	2	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2025510-2025939	Cluster_2516	Pocillopora_meandrina_HIv1___Sc0000007	2025510	2025939	430	119	40	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	39	2	111	1	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2304432-2304859	Cluster_2517	Pocillopora_meandrina_HIv1___Sc0000007	2304432	2304859	428	182	39	0.25274725274725274	.	UUGUUGUGUUUUUCGAUGGUGGGCAUCC	56	3	160	6	6	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2321107-2321518	Cluster_2518	Pocillopora_meandrina_HIv1___Sc0000007	2321107	2321518	412	135	80	0.1037037037037037	-	UGUGACCGAGGUCUUGAAAAA	20	54	6	52	15	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2364816-2365242	Cluster_2519	Pocillopora_meandrina_HIv1___Sc0000007	2364816	2365242	427	164	67	0.9939024390243902	+	UGAUUGACGUACGGUAUUUGAGACGC	25	2	153	1	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2399478-2400302	Cluster_2520	Pocillopora_meandrina_HIv1___Sc0000007	2399478	2400302	825	798	152	0.9962406015037594	+	AGCUGAGUGAUACUGACAUUUC	201	118	36	162	367	95	20	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2483714-2484129	Cluster_2521	Pocillopora_meandrina_HIv1___Sc0000007	2483714	2484129	416	422	17	0.0	-	GAGUUCUACAGUCCGA	329	422	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2625697-2626145	Cluster_2522	Pocillopora_meandrina_HIv1___Sc0000007	2625697	2626145	449	462	199	0.17965367965367965	-	UAUGACGUUCCAGAAUCUUUGACAAAA	39	5	439	2	6	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2626667-2627095	Cluster_2523	Pocillopora_meandrina_HIv1___Sc0000007	2626667	2627095	429	131	53	0.022900763358778626	-	UGAAUAGCAUAACUGAUGAACUACGUG	18	1	129	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2716658-2718359	Cluster_2524	Pocillopora_meandrina_HIv1___Sc0000007	2716658	2718359	1702	3715	1151	0.08775235531628534	-	UGUUUCGUCUAUGUGCAAUGUUACUU	215	29	3492	11	22	57	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2718799-2719226	Cluster_2525	Pocillopora_meandrina_HIv1___Sc0000007	2718799	2719226	428	149	61	0.1342281879194631	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	54	1	133	1	5	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2719310-2719736	Cluster_2526	Pocillopora_meandrina_HIv1___Sc0000007	2719310	2719736	427	311	126	0.11254019292604502	-	UCCAAUCACACACAGUUCUCCUGCGGC	70	2	286	1	2	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2720111-2720538	Cluster_2527	Pocillopora_meandrina_HIv1___Sc0000007	2720111	2720538	428	252	122	0.05952380952380952	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	28	1	235	0	1	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2720768-2721180	Cluster_2528	Pocillopora_meandrina_HIv1___Sc0000007	2720768	2721180	413	200	107	0.07	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	19	4	184	0	0	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3019485-3020049	Cluster_2529	Pocillopora_meandrina_HIv1___Sc0000007	3019485	3020049	565	350	209	0.1742857142857143	-	UGUCUUAAAUUGUCUUUGAAGGGCUUGUUG	14	4	320	2	4	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3066364-3066790	Cluster_2530	Pocillopora_meandrina_HIv1___Sc0000007	3066364	3066790	427	199	83	0.0	-	CCUCAUGGACGCCAAACUGAUGCUCAC	20	2	193	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3070005-3070433	Cluster_2531	Pocillopora_meandrina_HIv1___Sc0000007	3070005	3070433	429	103	23	0.009708737864077669	-	UGAGUUCUACUGUAACGACUGAAUAGACU	41	0	98	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3107655-3108083	Cluster_2532	Pocillopora_meandrina_HIv1___Sc0000007	3107655	3108083	429	293	44	0.006825938566552901	-	AAGAUGUCGAGCGUUUUCGGAACGAGUCG	127	4	272	0	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3209174-3209695	Cluster_2533	Pocillopora_meandrina_HIv1___Sc0000007	3209174	3209695	522	389	210	0.0	-	GUGUCAGCUGCCUGCACUGGGCCAGG	37	42	252	15	18	30	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3243241-3243668	Cluster_2534	Pocillopora_meandrina_HIv1___Sc0000007	3243241	3243668	428	138	65	0.8913043478260869	+	UGUAUUUGCUGAUCUAUUUGACAUCCUU	21	7	125	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3244846-3247558	Cluster_2535	Pocillopora_meandrina_HIv1___Sc0000007	3244846	3247558	2713	4218	2775	0.000474158368895211	-	GGGAAACAGUGUAUACUUUGUAAGU	18	904	1994	293	343	352	332	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3247716-3248683	Cluster_2536	Pocillopora_meandrina_HIv1___Sc0000007	3247716	3248683	968	1277	869	0.0	-	CAUUUGGUCUGUGAGCAAAAGCA	12	279	578	108	120	111	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3248739-3249649	Cluster_2537	Pocillopora_meandrina_HIv1___Sc0000007	3248739	3249649	911	910	621	0.0	-	GCUGUGUCUUAGAGAACC	17	225	374	77	87	72	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3249790-3251091	Cluster_2538	Pocillopora_meandrina_HIv1___Sc0000007	3249790	3251091	1302	1386	992	0.0	-	CAAAAGACUGUAUUGUACUCAAUU	6	352	564	121	111	126	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3251174-3254057	Cluster_2539	Pocillopora_meandrina_HIv1___Sc0000007	3251174	3254057	2884	3400	2371	0.0014705882352941176	-	UUGAAAGUAGCUCUCUGAUUCAC	9	837	1414	271	305	298	275	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3254202-3255319	Cluster_2540	Pocillopora_meandrina_HIv1___Sc0000007	3254202	3255319	1118	1248	844	0.0008012820512820513	-	UUUGAACUAGUGGAGUGGAAAGCU	18	309	514	130	93	104	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3256042-3256965	Cluster_2541	Pocillopora_meandrina_HIv1___Sc0000007	3256042	3256965	924	946	668	0.0	-	AACACUCCGUGUACUCAGACA	10	214	402	84	77	85	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3284710-3285240	Cluster_2542	Pocillopora_meandrina_HIv1___Sc0000007	3284710	3285240	531	943	275	1.0	+	UACCCUCUUCAUUAAAUAGCUUG	61	51	503	64	49	163	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3285428-3285960	Cluster_2543	Pocillopora_meandrina_HIv1___Sc0000007	3285428	3285960	533	369	104	1.0	+	UACCCUCUUCAUUUAAUAGCUUGCUU	79	81	184	36	24	24	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3286476-3286958	Cluster_2544	Pocillopora_meandrina_HIv1___Sc0000007	3286476	3286958	483	5923	505	1.0	+	CCAUUGAGUGCUGUCUGAGCUGA	689	689	1088	407	1409	1728	602	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3412445-3412875	Cluster_2545	Pocillopora_meandrina_HIv1___Sc0000007	3412445	3412875	431	1509	113	1.0	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	507	0	1504	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3416396-3416823	Cluster_2546	Pocillopora_meandrina_HIv1___Sc0000007	3416396	3416823	428	87	15	0.011494252873563218	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	0	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3596624-3597052	Cluster_2547	Pocillopora_meandrina_HIv1___Sc0000007	3596624	3597052	429	158	43	0.8417721518987342	+	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	51	4	148	2	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3621414-3621871	Cluster_2548	Pocillopora_meandrina_HIv1___Sc0000007	3621414	3621871	458	586	169	0.8771331058020477	+	UUGGACGAAAUUUCGAGGUUCACACUCGUU	77	1	568	3	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3625165-3625966	Cluster_2549	Pocillopora_meandrina_HIv1___Sc0000007	3625165	3625966	802	499	149	0.8997995991983968	+	UGAGACUUUGAUUUUAACUGCU	63	35	327	7	113	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3629143-3629888	Cluster_2550	Pocillopora_meandrina_HIv1___Sc0000007	3629143	3629888	746	1335	452	0.6202247191011236	.	CAAGACUGAAUUCCUUAUCAUUGGCACAUC	170	12	1250	9	4	16	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3631086-3631919	Cluster_2551	Pocillopora_meandrina_HIv1___Sc0000007	3631086	3631919	834	586	245	0.04607508532423208	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	58	0	573	2	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3633716-3634331	Cluster_2552	Pocillopora_meandrina_HIv1___Sc0000007	3633716	3634331	616	1315	151	0.24866920152091254	.	UGCUGUAUGUAAUCUGAUGCAAGAACGC	165	7	1146	107	5	30	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3634376-3635132	Cluster_2553	Pocillopora_meandrina_HIv1___Sc0000007	3634376	3635132	757	973	172	0.6115107913669064	.	UAAAGAGGACUGAUAAUCUCAGGUUAUC	267	4	758	5	29	33	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3635509-3635937	Cluster_2554	Pocillopora_meandrina_HIv1___Sc0000007	3635509	3635937	429	251	45	0.027888446215139442	-	AAGGAGUUGAAAAGAACAAUGAUGUAGC	58	1	248	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3656762-3657191	Cluster_2555	Pocillopora_meandrina_HIv1___Sc0000007	3656762	3657191	430	248	50	0.056451612903225805	-	AACUGAAGAAUUAAUCUCUAAAAUUGGUAG	99	4	243	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3662339-3662764	Cluster_2556	Pocillopora_meandrina_HIv1___Sc0000007	3662339	3662764	426	152	60	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	18	0	144	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3690491-3691008	Cluster_2557	Pocillopora_meandrina_HIv1___Sc0000007	3690491	3691008	518	490	218	0.0020408163265306124	-	UGGGUAUUUCCUCGUCCGCAGAACUGGUU	49	5	475	2	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3871978-3872681	Cluster_2558	Pocillopora_meandrina_HIv1___Sc0000007	3871978	3872681	704	281	141	0.9359430604982206	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	37	2	270	0	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3873911-3874340	Cluster_2559	Pocillopora_meandrina_HIv1___Sc0000007	3873911	3874340	430	263	132	0.8593155893536122	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	33	2	240	2	0	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4514094-4514523	Cluster_2560	Pocillopora_meandrina_HIv1___Sc0000007	4514094	4514523	430	187	29	1.0	+	UCAACAGCCUGAACUUGUCUUCACAAGACU	61	0	186	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4561649-4562110	Cluster_2561	Pocillopora_meandrina_HIv1___Sc0000007	4561649	4562110	462	844	344	0.9869668246445498	+	GCAGAGGAAGCGUGCUGGGC	24	403	222	81	78	38	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4596422-4596884	Cluster_2562	Pocillopora_meandrina_HIv1___Sc0000007	4596422	4596884	463	1545	353	1.0	+	AAUAAUGAUGAAUUGCACUGGGUUAUGAUA	118	313	778	66	75	162	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4624808-4625709	Cluster_2563	Pocillopora_meandrina_HIv1___Sc0000007	4624808	4625709	902	1076	263	0.9618959107806692	+	UAAGCAAUCAACUCCAACAAACUCGUCAGA	256	12	1032	8	2	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4800325-4800782	Cluster_2564	Pocillopora_meandrina_HIv1___Sc0000007	4800325	4800782	458	637	181	0.0	-	AAUAAUGAUGAUUUGCACUGA	30	108	201	75	63	109	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4801557-4801981	Cluster_2565	Pocillopora_meandrina_HIv1___Sc0000007	4801557	4801981	425	206	92	0.0	-	AAUGAUGAUGAAUUGCACUG	17	42	87	9	13	31	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4846331-4846744	Cluster_2566	Pocillopora_meandrina_HIv1___Sc0000007	4846331	4846744	414	164	74	0.2804878048780488	.	GAUGAAAGGAAAUGCAAACUUGCUAAAACA	23	2	152	1	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4889037-4889456	Cluster_2567	Pocillopora_meandrina_HIv1___Sc0000007	4889037	4889456	420	104	35	1.0	+	GAUUAUUUGUAGAACUUGCAGUGU	21	37	31	6	2	1	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4960512-4960935	Cluster_2568	Pocillopora_meandrina_HIv1___Sc0000007	4960512	4960935	424	143	48	0.951048951048951	+	UUGGGGAUCAAAGACGAAACGAGU	43	1	37	9	0	15	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4962460-4962870	Cluster_2569	Pocillopora_meandrina_HIv1___Sc0000007	4962460	4962870	411	129	63	0.0	-	UGUAAGUGUAGCCCUGAGUAUCGAUCAGC	17	2	121	5	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5045345-5045793	Cluster_2570	Pocillopora_meandrina_HIv1___Sc0000007	5045345	5045793	449	537	384	0.0	-	AAUUGAUUUUCGUGAAGCUGUCGUU	7	122	244	45	41	37	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5048040-5048457	Cluster_2571	Pocillopora_meandrina_HIv1___Sc0000007	5048040	5048457	418	265	191	0.0	-	GGAUGAAUCUGACAGCGACU	7	58	121	26	23	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5147626-5148534	Cluster_2572	Pocillopora_meandrina_HIv1___Sc0000007	5147626	5148534	909	4560	420	0.9618421052631579	+	UAAGAUCUCUUCGGUCAGAUCGUCACGG	1665	24	4490	7	6	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5192655-5193083	Cluster_2573	Pocillopora_meandrina_HIv1___Sc0000007	5192655	5193083	429	113	44	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	39	0	108	3	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5193674-5194081	Cluster_2574	Pocillopora_meandrina_HIv1___Sc0000007	5193674	5194081	408	70	39	0.22857142857142856	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	10	0	70	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5194635-5195063	Cluster_2575	Pocillopora_meandrina_HIv1___Sc0000007	5194635	5195063	429	116	40	0.0	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	38	0	107	1	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5223879-5224288	Cluster_2576	Pocillopora_meandrina_HIv1___Sc0000007	5223879	5224288	410	94	24	0.3404255319148936	.	AGUGUCAGAAUGCAAUGCCUACUUAUCCCC	22	1	84	3	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5228967-5229397	Cluster_2577	Pocillopora_meandrina_HIv1___Sc0000007	5228967	5229397	431	451	99	0.013303769401330377	-	UGUUCAUGCUGUGCUUGACGAGCUUGUC	118	7	436	1	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5229741-5230355	Cluster_2578	Pocillopora_meandrina_HIv1___Sc0000007	5229741	5230355	615	418	167	0.045454545454545456	-	UCAAAUACAACACCAAAAGAC	74	16	295	84	5	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5262939-5263347	Cluster_2579	Pocillopora_meandrina_HIv1___Sc0000007	5262939	5263347	409	141	91	0.22695035460992907	.	UAUACGAACAGAUCAGUUCCUCCGA	9	9	117	0	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5303058-5304112	Cluster_2580	Pocillopora_meandrina_HIv1___Sc0000007	5303058	5304112	1055	467	183	0.9528907922912205	+	UGUUUACGGACGGUCCUUAUGUUGUGGAG	41	6	446	1	2	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5304523-5304948	Cluster_2581	Pocillopora_meandrina_HIv1___Sc0000007	5304523	5304948	426	112	53	0.9464285714285714	+	UCUAGUUCCCGAUCGUUGGAAUGCCACU	17	0	112	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5306438-5306996	Cluster_2582	Pocillopora_meandrina_HIv1___Sc0000007	5306438	5306996	559	955	248	0.9706806282722513	+	UGGACGUACGCAUUCACGAUCUCGCUCGUU	65	0	915	10	2	5	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5310720-5311147	Cluster_2583	Pocillopora_meandrina_HIv1___Sc0000007	5310720	5311147	428	232	95	0.2543103448275862	.	UGGACCGUACGAAUCUCACUGAUCGAC	37	51	146	23	5	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5326494-5327037	Cluster_2584	Pocillopora_meandrina_HIv1___Sc0000007	5326494	5327037	544	1167	312	1.0	+	UGUAGAUUACAUUGUCGGCACAUU	196	79	432	86	80	154	336	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5327132-5327635	Cluster_2585	Pocillopora_meandrina_HIv1___Sc0000007	5327132	5327635	504	460	237	0.9978260869565218	+	UGCAGGACAAGAGAAAAGAAUU	27	64	213	42	54	33	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5333247-5333666	Cluster_2586	Pocillopora_meandrina_HIv1___Sc0000007	5333247	5333666	420	249	169	0.020080321285140562	-	GUAAGCUUUGUCAGCACUCUACAGAUUUGU	11	48	108	23	16	33	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5341789-5342205	Cluster_2587	Pocillopora_meandrina_HIv1___Sc0000007	5341789	5342205	417	143	70	0.0	-	GCAGAUGAUAAAUGCUCCUUGACUGUGGCA	33	28	95	6	3	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5497876-5498310	Cluster_2588	Pocillopora_meandrina_HIv1___Sc0000007	5497876	5498310	435	284	196	0.0	-	CUCUUCUACGCUGGACAACCUCUAGA	10	85	110	38	19	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5579669-5580098	Cluster_2589	Pocillopora_meandrina_HIv1___Sc0000007	5579669	5580098	430	338	43	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACC	194	3	309	0	6	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5636610-5637039	Cluster_2590	Pocillopora_meandrina_HIv1___Sc0000007	5636610	5637039	430	336	42	0.002976190476190476	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACC	206	0	316	1	4	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5688875-5689904	Cluster_2591	Pocillopora_meandrina_HIv1___Sc0000007	5688875	5689904	1030	18151	1558	0.0	-	GUGGCAACUUUGCUAGUGAACU	1472	883	8002	507	4596	1759	2404	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5886330-5886758	Cluster_2592	Pocillopora_meandrina_HIv1___Sc0000007	5886330	5886758	429	115	32	0.043478260869565216	-	AUCUAAACGAACUUGUUUUUCUUAUGAGCA	47	2	106	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5914402-5914825	Cluster_2593	Pocillopora_meandrina_HIv1___Sc0000007	5914402	5914825	424	109	45	0.7614678899082569	.	UGUGUAUGCGUCUAUAAGUAUUUUGAGC	24	1	108	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6376617-6377151	Cluster_2594	Pocillopora_meandrina_HIv1___Sc0000007	6376617	6377151	535	705	155	1.0	+	UGGCAUUUGUAAAGCCCACGCGACGU	101	29	605	20	14	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6394917-6395341	Cluster_2595	Pocillopora_meandrina_HIv1___Sc0000007	6394917	6395341	425	125	38	0.032	-	GGGGGCAUAGCUCAGUGGUAGAGCAUU	22	9	73	11	14	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6616417-6616844	Cluster_2596	Pocillopora_meandrina_HIv1___Sc0000007	6616417	6616844	428	272	76	0.04044117647058824	-	UGAUAAACCUGUAGCUGAAGCUUCUGCA	72	6	241	5	9	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6749085-6749513	Cluster_2597	Pocillopora_meandrina_HIv1___Sc0000007	6749085	6749513	429	233	40	0.017167381974248927	-	AACUGAAGAAUCGAUCUCUGAAACCGAUA	57	2	217	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6929571-6929998	Cluster_2598	Pocillopora_meandrina_HIv1___Sc0000007	6929571	6929998	428	298	74	0.12416107382550336	-	UGAAACUCUGAUCUGAAAACAUUUGUC	76	12	274	5	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6983631-6984060	Cluster_2599	Pocillopora_meandrina_HIv1___Sc0000007	6983631	6984060	430	82	24	0.012195121951219513	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	26	0	81	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6986003-6986430	Cluster_2600	Pocillopora_meandrina_HIv1___Sc0000007	6986003	6986430	428	93	32	0.021505376344086023	-	AACUGAAGAAUCAACCUCUGAAACCGAUA	48	1	86	4	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7044680-7045107	Cluster_2601	Pocillopora_meandrina_HIv1___Sc0000007	7044680	7045107	428	215	75	0.004651162790697674	-	UGCAGAGACUCUUGGGAACCAAAGCUCAUU	44	1	208	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7045916-7046838	Cluster_2602	Pocillopora_meandrina_HIv1___Sc0000007	7045916	7046838	923	1944	491	0.0	-	UCGGCCACGAUCUUUCUUGUAAACUAGAAA	218	9	1885	9	4	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7046891-7047410	Cluster_2603	Pocillopora_meandrina_HIv1___Sc0000007	7046891	7047410	520	572	165	0.0	-	UGAUAUCAAUAUGACGUCAUAACCGUGGGA	123	2	546	3	3	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7082683-7083500	Cluster_2604	Pocillopora_meandrina_HIv1___Sc0000007	7082683	7083500	818	685	206	0.40145985401459855	.	UGGACCACAAACUCUGACCCUAAGCUUAUU	94	9	589	8	13	14	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7083680-7084500	Cluster_2605	Pocillopora_meandrina_HIv1___Sc0000007	7083680	7084500	821	2232	277	0.9623655913978495	+	UUUGAUUCCGAAAAAAUGUAAUCUUCUGC	1194	26	2128	9	22	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7153155-7154927	Cluster_2606	Pocillopora_meandrina_HIv1___Sc0000007	7153155	7154927	1773	9481	2379	0.9283830819533805	+	UGAUAGACUGCACGACGAUUUACGUCA	504	83	8631	68	77	280	342	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7154981-7155658	Cluster_2607	Pocillopora_meandrina_HIv1___Sc0000007	7154981	7155658	678	8289	548	0.996742671009772	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2294	8	8145	4	63	34	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7248731-7249152	Cluster_2608	Pocillopora_meandrina_HIv1___Sc0000007	7248731	7249152	422	102	39	0.09803921568627451	-	UCUUGCCAUAUGAGAUGACUACUGA	29	6	60	1	14	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7355065-7355542	Cluster_2609	Pocillopora_meandrina_HIv1___Sc0000007	7355065	7355542	478	2293	371	1.0	+	GCCCCAAUGAUUAUUUGUAUUGUAGAGU	248	258	1246	141	262	175	211	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7480715-7481625	Cluster_2610	Pocillopora_meandrina_HIv1___Sc0000007	7480715	7481625	911	882	327	0.8934240362811792	+	UGGGUCGUAUUCCUAAAUCUUGAGCAA	65	13	795	15	8	14	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7482963-7483385	Cluster_2611	Pocillopora_meandrina_HIv1___Sc0000007	7482963	7483385	423	107	53	0.9626168224299065	+	UAUUUGCACCGUUUUUCUUGAAUAUAGACA	12	4	100	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7611857-7612286	Cluster_2612	Pocillopora_meandrina_HIv1___Sc0000007	7611857	7612286	430	101	20	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	42	1	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7614942-7615367	Cluster_2613	Pocillopora_meandrina_HIv1___Sc0000007	7614942	7615367	426	218	125	0.8532110091743119	+	UACUGAUAGUGAAACUGCUCCUUGAACC	16	3	203	0	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7615385-7615815	Cluster_2614	Pocillopora_meandrina_HIv1___Sc0000007	7615385	7615815	431	328	136	0.9542682926829268	+	UGAUAACUGUACUCUUGAAAUUCAUCGA	21	1	317	3	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7637557-7638158	Cluster_2615	Pocillopora_meandrina_HIv1___Sc0000007	7637557	7638158	602	691	390	0.001447178002894356	-	AUUGCUAAUGGAUUUGCUGAGAAGU	21	192	318	50	50	38	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7639152-7639561	Cluster_2616	Pocillopora_meandrina_HIv1___Sc0000007	7639152	7639561	410	176	131	0.0	-	GCAGAAGGAACCAUUGGCU	7	70	58	12	11	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7640267-7640674	Cluster_2617	Pocillopora_meandrina_HIv1___Sc0000007	7640267	7640674	408	74	48	0.0	-	CGUGUGGAACGGACGUCAAAU	4	32	15	10	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7641666-7642131	Cluster_2618	Pocillopora_meandrina_HIv1___Sc0000007	7641666	7642131	466	335	224	0.0029850746268656717	-	GGCAACGCCAGGUCUGUGUAUUUCGUGC	9	101	133	14	40	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7650244-7650717	Cluster_2619	Pocillopora_meandrina_HIv1___Sc0000007	7650244	7650717	474	60382	1930	0.9986419793978338	+	CACCCCUCUCCGCUCAUCGACCUCAUC	4637	5432	48291	1645	1596	1565	1853	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7651332-7651803	Cluster_2620	Pocillopora_meandrina_HIv1___Sc0000007	7651332	7651803	472	42227	1154	0.9965898595685225	+	CACCCCUCUCCGCCUAUCGACCUCAU	3974	7897	28678	1701	1031	1366	1554	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7651963-7652545	Cluster_2621	Pocillopora_meandrina_HIv1___Sc0000007	7651963	7652545	583	1192	268	0.5436241610738255	.	UUUUGACUACCAAUGGAACCAGAAAGU	141	166	853	60	31	10	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7670315-7670767	Cluster_2622	Pocillopora_meandrina_HIv1___Sc0000007	7670315	7670767	453	3069	118	1.0	+	UCAUGUAGAUGCGCAUGUCCGG	813	1158	101	69	1631	101	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7794359-7794782	Cluster_2623	Pocillopora_meandrina_HIv1___Sc0000007	7794359	7794782	424	288	208	1.0	+	AUCUUCGAUCACAGGGACUGU	7	82	105	43	15	16	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8002703-8003120	Cluster_2624	Pocillopora_meandrina_HIv1___Sc0000007	8002703	8003120	418	314	41	1.0	+	AACCUCGCUCUGCUACCA	186	314	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8052923-8053350	Cluster_2625	Pocillopora_meandrina_HIv1___Sc0000007	8052923	8053350	428	156	37	0.9935897435897436	+	UGGAAUUCGAAGCAAGUAACAAUGGACA	34	0	150	3	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8205880-8206297	Cluster_2626	Pocillopora_meandrina_HIv1___Sc0000007	8205880	8206297	418	100	53	0.82	+	UCUCGGCAUCUAAUCUCCAUU	26	33	0	59	4	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8242890-8243445	Cluster_2627	Pocillopora_meandrina_HIv1___Sc0000007	8242890	8243445	556	1042	112	0.052783109404990404	-	UUGGGUACUGGUGCACUGG	565	606	409	4	8	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8285013-8285444	Cluster_2628	Pocillopora_meandrina_HIv1___Sc0000007	8285013	8285444	432	28557	233	0.0015407780929369331	-	UAACUUCAACUAGAUCGAAAUGCUCGUGA	20755	31	28400	6	5	4	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8355090-8355519	Cluster_2629	Pocillopora_meandrina_HIv1___Sc0000007	8355090	8355519	430	146	15	1.0	+	CAGCCUGAAAAAAAAAAAAAAAAAAAAAA	37	0	145	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8508721-8509201	Cluster_2630	Pocillopora_meandrina_HIv1___Sc0000007	8508721	8509201	481	2171	267	0.0	-	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	682	75	1935	71	61	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8848491-8848918	Cluster_2631	Pocillopora_meandrina_HIv1___Sc0000007	8848491	8848918	428	222	84	0.972972972972973	+	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	39	3	216	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8849560-8849989	Cluster_2632	Pocillopora_meandrina_HIv1___Sc0000007	8849560	8849989	430	428	123	0.9719626168224299	+	UAUCGUCUUGUUUCUGUUCUGACCCGAAC	79	1	410	0	4	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8903232-8903974	Cluster_2633	Pocillopora_meandrina_HIv1___Sc0000007	8903232	8903974	743	485	356	0.9958762886597938	+	UUUGGACUUGAGCGAAAGCGUCG	7	86	209	41	46	60	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8912963-8913666	Cluster_2634	Pocillopora_meandrina_HIv1___Sc0000007	8912963	8913666	704	341	254	1.0	+	GUCAAAGGAUAACAGAGAACGGACA	12	64	180	23	26	28	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8992163-8992653	Cluster_2635	Pocillopora_meandrina_HIv1___Sc0000007	8992163	8992653	491	267	120	0.9962546816479401	+	CCUUCGAUAGCUCAGUUGGU	38	100	80	20	14	18	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8995452-8995931	Cluster_2636	Pocillopora_meandrina_HIv1___Sc0000007	8995452	8995931	480	63501	2185	0.9985354561345491	+	CCCCCCUCCCCGCCUUAUGACCUCAUC	3032	19032	34963	3955	2724	1392	1435	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8997769-8998243	Cluster_2637	Pocillopora_meandrina_HIv1___Sc0000007	8997769	8998243	475	220692	3487	0.9999456255777283	+	CGCCCCUCCCCGCCCUUUGACCUCAUU	20042	45712	138371	9335	15564	8216	3494	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9006638-9007112	Cluster_2638	Pocillopora_meandrina_HIv1___Sc0000007	9006638	9007112	475	5546	562	0.9994590695997115	+	CGCCCCUCCCCGCCCUUUGACCUCAUU	553	1071	3582	243	369	183	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9011782-9012203	Cluster_2639	Pocillopora_meandrina_HIv1___Sc0000007	9011782	9012203	422	121	37	0.04132231404958678	-	UCGAAUCCGGCUCGAAGGACCA	32	19	15	6	37	20	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9075748-9076178	Cluster_2640	Pocillopora_meandrina_HIv1___Sc0000007	9075748	9076178	431	538	60	0.007434944237918215	-	UGACAAUCAUGCUGCUAAGUUCCUACGC	139	2	535	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9143220-9143647	Cluster_2641	Pocillopora_meandrina_HIv1___Sc0000007	9143220	9143647	428	354	120	0.05367231638418079	-	AAUGGGAAAACGAGAACAGCGUGA	36	7	164	10	2	62	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9194274-9194692	Cluster_2642	Pocillopora_meandrina_HIv1___Sc0000007	9194274	9194692	419	139	61	0.04316546762589928	-	UUCGAAGGCUGUCUUCAAAUUUCACUUGA	19	2	132	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9194835-9195263	Cluster_2643	Pocillopora_meandrina_HIv1___Sc0000007	9194835	9195263	429	167	28	0.0	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	95	0	167	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9448844-9449271	Cluster_2644	Pocillopora_meandrina_HIv1___Sc0000007	9448844	9449271	428	185	78	0.9837837837837838	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	30	4	174	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9450571-9450991	Cluster_2645	Pocillopora_meandrina_HIv1___Sc0000007	9450571	9450991	421	95	41	0.9368421052631579	+	UGAACUUGAACUAUUUGCUGGAGACGAAAG	24	1	90	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9521201-9521609	Cluster_2646	Pocillopora_meandrina_HIv1___Sc0000007	9521201	9521609	409	114	70	0.9824561403508771	+	UGUACUUGAGUAAAGAUUGUUAGAAACU	10	2	101	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9521676-9522721	Cluster_2647	Pocillopora_meandrina_HIv1___Sc0000007	9521676	9522721	1046	2559	735	0.9449003516998827	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	298	33	2392	10	28	46	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9522737-9524224	Cluster_2648	Pocillopora_meandrina_HIv1___Sc0000007	9522737	9524224	1488	4029	1325	0.887813353189377	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	150	56	3567	34	34	156	182	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9526545-9526972	Cluster_2649	Pocillopora_meandrina_HIv1___Sc0000007	9526545	9526972	428	155	60	0.2903225806451613	.	UUAUUUCACAUGAUUUGACAGAAGCCCU	28	4	134	3	1	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9960932-9961359	Cluster_2650	Pocillopora_meandrina_HIv1___Sc0000007	9960932	9961359	428	98	21	1.0	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCG	49	1	97	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10057321-10057751	Cluster_2651	Pocillopora_meandrina_HIv1___Sc0000007	10057321	10057751	431	435	94	0.006896551724137931	-	UAAGACUGACGAAGGCUAAGGUGAACAGC	100	4	419	1	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10058874-10059300	Cluster_2652	Pocillopora_meandrina_HIv1___Sc0000007	10058874	10059300	427	278	74	0.1618705035971223	-	UGUACUUUCUUUGGGCCAUGUAAUCU	70	9	255	4	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10064882-10065311	Cluster_2653	Pocillopora_meandrina_HIv1___Sc0000007	10064882	10065311	430	247	71	0.1659919028340081	-	UUGUCUGGAUUGUACACUUUGAAGUGCA	23	0	242	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10065356-10065769	Cluster_2654	Pocillopora_meandrina_HIv1___Sc0000007	10065356	10065769	414	197	97	0.9593908629441624	+	AAGGACCGCAGAGUUUUCCAGAUG	31	6	141	2	0	4	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10065933-10066449	Cluster_2655	Pocillopora_meandrina_HIv1___Sc0000007	10065933	10066449	517	1818	376	0.4911991199119912	.	GGAUGCUGAAACCAAUUGAUUAACUGAUC	289	4	1733	2	10	25	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10068802-10069229	Cluster_2656	Pocillopora_meandrina_HIv1___Sc0000007	10068802	10069229	428	132	33	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUG	37	1	122	0	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10079401-10079831	Cluster_2657	Pocillopora_meandrina_HIv1___Sc0000007	10079401	10079831	431	1015	96	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUG	333	3	968	3	6	12	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10081788-10082212	Cluster_2658	Pocillopora_meandrina_HIv1___Sc0000007	10081788	10082212	425	83	42	1.0	+	UUUUCCUGGGCUCGCAGCUUUCUCUGUU	6	0	82	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10085918-10086347	Cluster_2659	Pocillopora_meandrina_HIv1___Sc0000007	10085918	10086347	430	316	64	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUA	124	3	303	1	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10261325-10261861	Cluster_2660	Pocillopora_meandrina_HIv1___Sc0000007	10261325	10261861	537	3107	625	0.11200514966205342	-	ACAAGCGAUAUGUGGACCUU	385	634	2241	42	68	32	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10262068-10262496	Cluster_2661	Pocillopora_meandrina_HIv1___Sc0000007	10262068	10262496	429	186	35	0.016129032258064516	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	90	0	173	0	0	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10821461-10821888	Cluster_2662	Pocillopora_meandrina_HIv1___Sc0000007	10821461	10821888	428	93	6	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	72	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10822956-10823397	Cluster_2663	Pocillopora_meandrina_HIv1___Sc0000007	10822956	10823397	442	1389	152	0.06551475881929446	-	UGCGAUCGCCAUGAAAUGAUUCUGGG	406	9	1351	0	9	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11000881-11001308	Cluster_2664	Pocillopora_meandrina_HIv1___Sc0000007	11000881	11001308	428	91	35	0.01098901098901099	-	UAGGAUCGUUCUAGAAAACCAGCGUAAGAUG	31	0	89	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11010953-11011762	Cluster_2665	Pocillopora_meandrina_HIv1___Sc0000007	11010953	11011762	810	251	118	0.7330677290836654	.	UGUUCAACUCUUUCAAUGGCGGCUGUG	20	1	232	0	4	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11146444-11146933	Cluster_2666	Pocillopora_meandrina_HIv1___Sc0000007	11146444	11146933	490	413	114	0.05084745762711865	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	72	6	356	4	3	17	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11171896-11172325	Cluster_2667	Pocillopora_meandrina_HIv1___Sc0000007	11171896	11172325	430	628	97	0.042993630573248405	-	UUAGACAAGGAGAAUUCCAGC	117	56	395	161	3	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11357092-11358413	Cluster_2668	Pocillopora_meandrina_HIv1___Sc0000007	11357092	11358413	1322	1450	481	0.9241379310344827	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	107	11	1378	3	8	27	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11358633-11359287	Cluster_2669	Pocillopora_meandrina_HIv1___Sc0000007	11358633	11359287	655	615	301	0.5951219512195122	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	22	6	550	2	6	18	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11359302-11360083	Cluster_2670	Pocillopora_meandrina_HIv1___Sc0000007	11359302	11360083	782	2564	553	0.9177067082683308	+	UGGAUAUACGUACACAAUCUAGGCUAA	868	12	2484	12	5	14	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11760920-11761347	Cluster_2671	Pocillopora_meandrina_HIv1___Sc0000007	11760920	11761347	428	85	21	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	1	83	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11764011-11764426	Cluster_2672	Pocillopora_meandrina_HIv1___Sc0000007	11764011	11764426	416	223	127	0.8609865470852018	+	UACUGAUAGUGAAACUGCUCCUUGAACCUC	11	4	211	1	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11764448-11764878	Cluster_2673	Pocillopora_meandrina_HIv1___Sc0000007	11764448	11764878	431	341	158	0.9530791788856305	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	26	4	321	1	1	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11769398-11769828	Cluster_2674	Pocillopora_meandrina_HIv1___Sc0000007	11769398	11769828	431	206	40	0.9951456310679612	+	UGUGUGACUUUGUAUGUAUAUUGAGCGU	40	1	205	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11931412-11931839	Cluster_2675	Pocillopora_meandrina_HIv1___Sc0000007	11931412	11931839	428	96	24	0.020833333333333332	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	39	3	90	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11943905-11944332	Cluster_2676	Pocillopora_meandrina_HIv1___Sc0000007	11943905	11944332	428	238	118	0.7773109243697479	.	UAGGGCUAACGAACACUGGUUGGACAGU	52	19	194	18	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12067431-12068032	Cluster_2677	Pocillopora_meandrina_HIv1___Sc0000007	12067431	12068032	602	611	174	0.0016366612111292963	-	UGAUGUUAUACUGUGAAAUCUCGUACCCGG	53	1	597	2	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12077062-12077489	Cluster_2678	Pocillopora_meandrina_HIv1___Sc0000007	12077062	12077489	428	258	63	1.0	+	UAUUACGGCUGUUGACUAUCCUUG	55	22	144	7	1	4	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12231846-12232275	Cluster_2679	Pocillopora_meandrina_HIv1___Sc0000007	12231846	12232275	430	290	53	0.7413793103448276	.	UACCAUAGAACUUUCCAGAACAUUUCAUC	94	0	273	2	0	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12251246-12251725	Cluster_2680	Pocillopora_meandrina_HIv1___Sc0000007	12251246	12251725	480	140418	3652	0.0016308450483556239	-	GUGGUCCGGACGGUCGAGGGUUAUCAAUCC	12670	6623	119925	2696	3287	3224	4663	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12436571-12437198	Cluster_2681	Pocillopora_meandrina_HIv1___Sc0000007	12436571	12437198	628	982	283	0.2820773930753564	.	UUAUACUUUAGAAUCUGAAGAGUGCUCGUC	53	8	935	9	6	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12437496-12438544	Cluster_2682	Pocillopora_meandrina_HIv1___Sc0000007	12437496	12438544	1049	1658	447	0.30759951749095293	.	UGUAACUUUGAGCUUCUUUUUUGCAGGA	208	7	1566	1	11	41	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12465284-12465686	Cluster_2683	Pocillopora_meandrina_HIv1___Sc0000007	12465284	12465686	403	136	61	0.36764705882352944	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	28	8	112	2	1	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12492901-12493331	Cluster_2684	Pocillopora_meandrina_HIv1___Sc0000007	12492901	12493331	431	641	95	0.9609984399375975	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	298	2	630	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12497064-12497660	Cluster_2685	Pocillopora_meandrina_HIv1___Sc0000007	12497064	12497660	597	962	193	0.060291060291060294	-	UCUUAACUGUUAUCUUGGGCGCAGGAGC	179	3	944	0	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12497863-12498464	Cluster_2686	Pocillopora_meandrina_HIv1___Sc0000007	12497863	12498464	602	1294	291	0.2874806800618238	.	CACGAUCUCAUUGUGAAGAAGUUCAAAGA	241	8	1264	3	4	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12509623-12510050	Cluster_2687	Pocillopora_meandrina_HIv1___Sc0000007	12509623	12510050	428	141	53	0.09929078014184398	-	UGAACGCAGAACAGUAGGCCCGUUGGUGA	24	4	128	2	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12510339-12510869	Cluster_2688	Pocillopora_meandrina_HIv1___Sc0000007	12510339	12510869	531	585	136	0.13846153846153847	-	UGAAAACUUUGAACAGACUUUACCUGAAAA	123	2	574	1	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12517058-12517589	Cluster_2689	Pocillopora_meandrina_HIv1___Sc0000007	12517058	12517589	532	603	223	0.009950248756218905	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	29	1	594	0	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12517709-12518138	Cluster_2690	Pocillopora_meandrina_HIv1___Sc0000007	12517709	12518138	430	618	120	0.014563106796116505	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	137	2	610	4	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12521364-12521816	Cluster_2691	Pocillopora_meandrina_HIv1___Sc0000007	12521364	12521816	453	627	277	0.16905901116427433	-	UGAUUUCGGUAUUGAUCCAGGGAAGUG	40	11	565	8	5	9	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12522581-12523010	Cluster_2692	Pocillopora_meandrina_HIv1___Sc0000007	12522581	12523010	430	491	140	0.028513238289205704	-	UGUAGAAUCAAUCUGUUACUAAGACACC	107	1	463	17	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12538793-12539221	Cluster_2693	Pocillopora_meandrina_HIv1___Sc0000007	12538793	12539221	429	93	22	0.0	-	UGAGUUCUACUGUAACGACUGAAUAGACU	28	0	87	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12539417-12539844	Cluster_2694	Pocillopora_meandrina_HIv1___Sc0000007	12539417	12539844	428	86	31	0.011627906976744186	-	UGCGAAAUGGAUUAUUUACUCUCGGCGGGC	14	1	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12541488-12541918	Cluster_2695	Pocillopora_meandrina_HIv1___Sc0000007	12541488	12541918	431	511	89	0.003913894324853229	-	UUGGAAUUCGAAGCAAGUAGCAAUAGA	124	10	435	1	1	3	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12543826-12544865	Cluster_2696	Pocillopora_meandrina_HIv1___Sc0000007	12543826	12544865	1040	3986	803	0.01655795283492223	-	UAUUACACUGUGUCAAAUAGCGUGCCUGA	618	14	3889	19	12	24	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12544927-12545354	Cluster_2697	Pocillopora_meandrina_HIv1___Sc0000007	12544927	12545354	428	166	64	0.0	-	UAGGUGUAUCACUCAGAGUGGAAGAAUGUG	25	3	157	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12573621-12574763	Cluster_2698	Pocillopora_meandrina_HIv1___Sc0000007	12573621	12574763	1143	2138	432	0.07811038353601497	-	UAUGUGUAUUAUUCUUGUUGCUAACAUCA	462	11	1932	17	63	83	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12578994-12579419	Cluster_2699	Pocillopora_meandrina_HIv1___Sc0000007	12578994	12579419	426	88	26	0.0	-	UCUGGCAGCUCUUGCGAUUUCCUGUAAAG	36	1	83	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12585902-12586630	Cluster_2700	Pocillopora_meandrina_HIv1___Sc0000007	12585902	12586630	729	899	244	0.01668520578420467	-	UACAAACAACAGAAUGUUCGAACGGCUCGAC	107	15	867	5	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12590176-12590607	Cluster_2701	Pocillopora_meandrina_HIv1___Sc0000007	12590176	12590607	432	511	123	0.03913894324853229	-	UGAUAUACUGUGCAAGAGCCUGUAAA	146	4	481	1	3	19	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12591473-12591879	Cluster_2702	Pocillopora_meandrina_HIv1___Sc0000007	12591473	12591879	407	104	52	0.4230769230769231	.	GGAAAUAUCAAGUAAAGAUCGGCCGUCAUG	15	6	95	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12595830-12596316	Cluster_2703	Pocillopora_meandrina_HIv1___Sc0000007	12595830	12596316	487	4143	253	0.008206613565049481	-	UGGUUUGAUUGUCAGCAGUAGAUGAAAUG	1822	37	4013	13	7	11	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12596390-12598169	Cluster_2704	Pocillopora_meandrina_HIv1___Sc0000007	12596390	12598169	1780	17046	846	0.0010559662090813093	-	UCAUAAACUCAUUGAUCCUCUUAACAUG	6028	61	16763	20	15	97	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12598811-12601054	Cluster_2705	Pocillopora_meandrina_HIv1___Sc0000007	12598811	12601054	2244	7514	2178	0.08104870907639074	-	UAUGUACGAUUUUAACUGGAAGAAACGUU	369	153	6953	36	58	151	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12601338-12601763	Cluster_2706	Pocillopora_meandrina_HIv1___Sc0000007	12601338	12601763	426	126	65	0.007936507936507936	-	UUUAUACGGUCUUUUUUCUUUGGGAUUUGA	16	2	121	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12607904-12608336	Cluster_2707	Pocillopora_meandrina_HIv1___Sc0000007	12607904	12608336	433	188	73	0.0	-	UCUGCUAUCUGACGCUCUGAACACUGGUC	33	1	185	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12608474-12609228	Cluster_2708	Pocillopora_meandrina_HIv1___Sc0000007	12608474	12609228	755	6015	468	0.010972568578553617	-	UGAACGAUCUUCUCACCAUCUCUUCUGGAA	1459	7	5956	10	4	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12616793-12617382	Cluster_2709	Pocillopora_meandrina_HIv1___Sc0000007	12616793	12617382	590	1057	261	0.13434247871333965	-	UAUCUCUCCCUUGAAAGCUUAUUUGGGUU	168	13	1000	5	5	7	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12617409-12617991	Cluster_2710	Pocillopora_meandrina_HIv1___Sc0000007	12617409	12617991	583	2496	363	0.031650641025641024	-	UAUCUCUCCCUUGAAAGCUUAUUUUGGUU	861	15	2371	14	16	32	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12619579-12620456	Cluster_2711	Pocillopora_meandrina_HIv1___Sc0000007	12619579	12620456	878	1195	384	0.005857740585774059	-	UCCGAUCUGGGGACCAAACCAUAACCUUUC	67	5	1168	7	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12624822-12625236	Cluster_2712	Pocillopora_meandrina_HIv1___Sc0000007	12624822	12625236	415	252	42	0.7261904761904762	.	CUUUCCGAGGUCGCA	183	184	66	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12625344-12626111	Cluster_2713	Pocillopora_meandrina_HIv1___Sc0000007	12625344	12626111	768	678	275	0.0	-	UCCUGAGAGCCUACAGGCAAAGAGAUUGUG	24	6	660	2	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12626251-12626661	Cluster_2714	Pocillopora_meandrina_HIv1___Sc0000007	12626251	12626661	411	180	73	0.0	-	UCUGUAAUGGCUUCUGAGUUGCAACUAGC	18	3	170	0	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12627062-12627490	Cluster_2715	Pocillopora_meandrina_HIv1___Sc0000007	12627062	12627490	429	300	102	0.0	-	UUCGAUCACAUCAGGAGAACUUCCAAGGC	39	5	290	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12627799-12628228	Cluster_2716	Pocillopora_meandrina_HIv1___Sc0000007	12627799	12628228	430	357	71	0.0	-	UAAUCUAAAUCAGGCUCCGGAAGUCCAAUU	173	2	353	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12631368-12631796	Cluster_2717	Pocillopora_meandrina_HIv1___Sc0000007	12631368	12631796	429	156	68	0.0	-	UCUUCCAUAUGUUGGCAACUGUUGUAGUC	28	2	154	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12639707-12640228	Cluster_2718	Pocillopora_meandrina_HIv1___Sc0000007	12639707	12640228	522	3794	370	0.0	-	UCAGUAACUGACCCAGGAUCUUGCUCUUC	1100	14	3707	16	10	7	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12642478-12642981	Cluster_2719	Pocillopora_meandrina_HIv1___Sc0000007	12642478	12642981	504	270	122	0.0	-	UGAUUUGUACGUACAGGGCUUGAUCACGUG	29	11	249	2	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12647061-12647489	Cluster_2720	Pocillopora_meandrina_HIv1___Sc0000007	12647061	12647489	429	245	54	0.0	-	UUCCUGUAACACUUUCACAGAUGCUGACA	105	31	202	0	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12648700-12649127	Cluster_2721	Pocillopora_meandrina_HIv1___Sc0000007	12648700	12649127	428	137	26	0.0072992700729927005	-	UGGUUUCUGGAACUGGAGAUCAAGGAGU	81	5	131	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12699562-12699991	Cluster_2722	Pocillopora_meandrina_HIv1___Sc0000007	12699562	12699991	430	302	36	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	113	0	283	0	3	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12839526-12839943	Cluster_2723	Pocillopora_meandrina_HIv1___Sc0000007	12839526	12839943	418	204	54	0.004901960784313725	-	CCGUGUUGUAGGCUU	65	158	16	6	6	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12853897-12855168	Cluster_2724	Pocillopora_meandrina_HIv1___Sc0000007	12853897	12855168	1272	1211	504	0.09248554913294797	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	91	9	1165	3	4	10	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12855189-12855596	Cluster_2725	Pocillopora_meandrina_HIv1___Sc0000007	12855189	12855596	408	289	163	0.3217993079584775	.	CCCAAUACCAACUGUAGAUGAACUGCUAC	16	2	250	0	1	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12855655-12856465	Cluster_2726	Pocillopora_meandrina_HIv1___Sc0000007	12855655	12856465	811	1135	323	0.07488986784140969	-	UGAAAAUCACUCUGUCCACAUUGAAU	171	15	1041	4	14	30	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12856549-12856975	Cluster_2727	Pocillopora_meandrina_HIv1___Sc0000007	12856549	12856975	427	310	114	0.07419354838709677	-	UCCAAUCACACACAGUUCUCCUGCGGC	72	2	301	0	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12857321-12858404	Cluster_2728	Pocillopora_meandrina_HIv1___Sc0000007	12857321	12858404	1084	2612	707	0.08843797856049004	-	UGUUACCGGUCUUGCUAACCACUUGGA	197	28	2397	15	26	37	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12867093-12867895	Cluster_2729	Pocillopora_meandrina_HIv1___Sc0000007	12867093	12867895	803	1338	348	0.2705530642750374	.	UCAACCAUGAGAACAGAAAACAGAAGCA	98	11	1276	1	12	6	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12899034-12899568	Cluster_2730	Pocillopora_meandrina_HIv1___Sc0000007	12899034	12899568	535	1389	357	0.08135349172066235	-	UACGUUCCAAUUUUCUAGUAUCACUCGC	176	35	1249	4	9	53	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12940130-12941805	Cluster_2731	Pocillopora_meandrina_HIv1___Sc0000007	12940130	12941805	1676	12486	1618	0.09883069037321801	-	UAUAGAUGUAGCUCUUGGUAUGUGCCA	2004	42	11579	25	84	257	499	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12943888-12944684	Cluster_2732	Pocillopora_meandrina_HIv1___Sc0000007	12943888	12944684	797	3039	552	0.8042119118130964	+	AUUUCUUUCAAUUUGGACUCAGCGAUGGA	319	31	2731	28	28	51	170	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12945055-12945484	Cluster_2733	Pocillopora_meandrina_HIv1___Sc0000007	12945055	12945484	430	254	51	0.9960629921259843	+	UCCGAAUACACGUGGAAAGGAUAAUUGGGC	181	0	251	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12945924-12946595	Cluster_2734	Pocillopora_meandrina_HIv1___Sc0000007	12945924	12946595	672	912	204	0.9978070175438597	+	UGCACUGGAAUACAACGAAUUCCCUGAAAGG	136	13	885	6	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12947360-12947787	Cluster_2735	Pocillopora_meandrina_HIv1___Sc0000007	12947360	12947787	428	4248	182	0.02142184557438795	-	UGUUACUGUAGAUGGGGUUUCCCUAGC	1259	7	3602	2	32	15	590	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12948352-12949360	Cluster_2736	Pocillopora_meandrina_HIv1___Sc0000007	12948352	12949360	1009	4444	755	0.8539603960396039	+	UGAUUGUACGCUUCCAGACUGCGAAAGG	862	22	4188	17	13	81	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12960835-12961264	Cluster_2737	Pocillopora_meandrina_HIv1___Sc0000007	12960835	12961264	430	465	45	0.002150537634408602	-	UUGAAGACUUUGUGGAUGAAAAGCUAUG	163	2	459	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12962412-12962949	Cluster_2738	Pocillopora_meandrina_HIv1___Sc0000007	12962412	12962949	538	598	162	0.0	-	UGUAGAAAUCGCUUCAAGCUUACGGCUUAGA	56	7	574	0	11	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12980049-12980657	Cluster_2739	Pocillopora_meandrina_HIv1___Sc0000007	12980049	12980657	609	376	142	0.6356382978723404	.	AAGUAAAAAAGUGCGACUGAAGC	43	15	166	14	12	101	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12981420-12982492	Cluster_2740	Pocillopora_meandrina_HIv1___Sc0000007	12981420	12982492	1073	3987	478	0.9157261098570354	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGCG	663	65	3541	9	28	117	227	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12987565-12989325	Cluster_2741	Pocillopora_meandrina_HIv1___Sc0000007	12987565	12989325	1761	23656	2358	0.027392627663172135	-	UUUUUCGAACAGAUCUUCUGGCCAAAGA	1921	137	22291	108	136	281	703	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12990601-12991442	Cluster_2742	Pocillopora_meandrina_HIv1___Sc0000007	12990601	12991442	842	24411	935	0.00532546802670927	-	UCGGUGUUAUGAUUGUUGAAACAGUCCA	15284	83	23825	77	195	163	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12991489-12991909	Cluster_2743	Pocillopora_meandrina_HIv1___Sc0000007	12991489	12991909	421	95	36	0.010526315789473684	-	UAUAACGAUUUUGACUCCCACUUGGACCA	26	0	93	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12993684-12994114	Cluster_2744	Pocillopora_meandrina_HIv1___Sc0000007	12993684	12994114	431	673	194	0.6552748885586924	.	UUUACGAUCAUCUGACACCUCGUC	115	6	447	1	2	58	159	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13000411-13000840	Cluster_2745	Pocillopora_meandrina_HIv1___Sc0000007	13000411	13000840	430	249	100	0.0321285140562249	-	UGAAAGGAGAUUUAGUAGACUGAAGGAAC	39	1	232	0	5	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13000983-13001963	Cluster_2746	Pocillopora_meandrina_HIv1___Sc0000007	13000983	13001963	981	5076	659	0.0033490937746256896	-	CCCUUCACUCCAGAAUGUAGGACCUCUUU	276	46	4904	22	27	25	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13011617-13012043	Cluster_2747	Pocillopora_meandrina_HIv1___Sc0000007	13011617	13012043	427	146	44	0.0	-	UGAGAUUCAAAGGCUUGGGUAGACUUG	25	1	145	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13012625-13013305	Cluster_2748	Pocillopora_meandrina_HIv1___Sc0000007	13012625	13013305	681	805	231	0.02236024844720497	-	UGAUAUACUGUGCAAGAGCCUGUAAA	153	7	760	4	3	29	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13013702-13014124	Cluster_2749	Pocillopora_meandrina_HIv1___Sc0000007	13013702	13014124	423	145	54	0.7793103448275862	.	AACGUAGCGAACUCGACAAGUAGC	31	9	35	48	0	12	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13014797-13015223	Cluster_2750	Pocillopora_meandrina_HIv1___Sc0000007	13014797	13015223	427	227	128	0.1145374449339207	-	UAUCAAGUGUUCCAGGAUUCUGUCGUC	13	0	208	1	2	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13020809-13021328	Cluster_2751	Pocillopora_meandrina_HIv1___Sc0000007	13020809	13021328	520	954	279	0.1750524109014675	-	UGAUAUGACCUUCGGCAAAAAACUGGA	112	5	855	3	3	22	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13021332-13022810	Cluster_2752	Pocillopora_meandrina_HIv1___Sc0000007	13021332	13022810	1479	1864	719	0.2317596566523605	.	UGUAACUGGUUCACUGCGAUUUUGUAGU	101	15	1603	11	10	73	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13024372-13025535	Cluster_2753	Pocillopora_meandrina_HIv1___Sc0000007	13024372	13025535	1164	2177	675	0.7207165824529168	.	UGCUUGUAGUUGGACCAUGUCUGUGACA	85	59	1936	9	25	28	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13025838-13026267	Cluster_2754	Pocillopora_meandrina_HIv1___Sc0000007	13025838	13026267	430	333	150	0.9069069069069069	+	UGAAGUAACUACGAACCCAUCUCGACCGU	25	2	317	2	4	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13026728-13027153	Cluster_2755	Pocillopora_meandrina_HIv1___Sc0000007	13026728	13027153	426	154	68	0.22727272727272727	.	UAUUUCCGUUCAUUUAAAUAGCUGUUU	16	22	127	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13031527-13031927	Cluster_2756	Pocillopora_meandrina_HIv1___Sc0000007	13031527	13031927	401	243	153	0.13991769547325103	-	UAGAGACUUUAAGUACUGGAAAUACUUA	12	3	207	5	6	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13032186-13032602	Cluster_2757	Pocillopora_meandrina_HIv1___Sc0000007	13032186	13032602	417	277	163	0.20938628158844766	.	UAAACAGUAGAACCAAUGGGUAAGAUA	14	4	231	5	6	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13032732-13033426	Cluster_2758	Pocillopora_meandrina_HIv1___Sc0000007	13032732	13033426	695	1087	354	0.15731370745170192	-	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	111	22	1008	2	6	17	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13039656-13040081	Cluster_2759	Pocillopora_meandrina_HIv1___Sc0000007	13039656	13040081	426	129	56	0.8527131782945736	+	AGAGAUGAUAAGGGACCAGAUCGUUGAA	18	20	95	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13041079-13041503	Cluster_2760	Pocillopora_meandrina_HIv1___Sc0000007	13041079	13041503	425	249	116	0.1566265060240964	-	UGUUCGCGUAAUUCGGUAUGAAUUUGG	23	3	232	1	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13050160-13050944	Cluster_2761	Pocillopora_meandrina_HIv1___Sc0000007	13050160	13050944	785	189	65	0.0	-	UGAUAAUAUCGGACUGUCUCCUGUUGAGA	56	1	185	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13057558-13058799	Cluster_2762	Pocillopora_meandrina_HIv1___Sc0000007	13057558	13058799	1242	11143	1402	0.019563851745490444	-	UCUGACUGACUAACAGGAUAUCUGCUUC	750	42	10842	12	36	80	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13069075-13069502	Cluster_2763	Pocillopora_meandrina_HIv1___Sc0000007	13069075	13069502	428	128	59	0.0	-	AGGACUACCAACAUCUUCUUUUCCCGGU	30	0	124	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13070719-13071146	Cluster_2764	Pocillopora_meandrina_HIv1___Sc0000007	13070719	13071146	428	370	128	0.0	-	UGGAUUGUCUUCAGUUGGGACGUGAUGC	140	2	362	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13084808-13085224	Cluster_2765	Pocillopora_meandrina_HIv1___Sc0000007	13084808	13085224	417	223	118	0.02242152466367713	-	UGAUACUGCAACUUCAUUUCUCUGGAAGA	16	2	210	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13086409-13086835	Cluster_2766	Pocillopora_meandrina_HIv1___Sc0000007	13086409	13086835	427	196	85	0.015306122448979591	-	UGUGAAGUGCUAACAAUGAUCUGAAGUGC	49	11	176	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13087126-13087891	Cluster_2767	Pocillopora_meandrina_HIv1___Sc0000007	13087126	13087891	766	281	103	0.0035587188612099642	-	UGAUCUUUUUUGUUAGGACCUUCCUACUCUU	69	4	276	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13095270-13095700	Cluster_2768	Pocillopora_meandrina_HIv1___Sc0000007	13095270	13095700	431	272	138	0.16176470588235295	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	33	2	247	0	2	2	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13096929-13097630	Cluster_2769	Pocillopora_meandrina_HIv1___Sc0000007	13096929	13097630	702	269	123	0.055762081784386616	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	29	3	260	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13100218-13100648	Cluster_2770	Pocillopora_meandrina_HIv1___Sc0000007	13100218	13100648	431	163	61	0.0	-	UGCACAGACUGACUUUGAAACAUCAAAUAUC	52	1	155	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13443366-13443767	Cluster_2771	Pocillopora_meandrina_HIv1___Sc0000007	13443366	13443767	402	228	172	0.0	-	AAAUAGUGAAUGGAUUUUUGUAGACU	4	40	139	14	8	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13555574-13556003	Cluster_2772	Pocillopora_meandrina_HIv1___Sc0000007	13555574	13556003	430	128	12	0.015625	-	UGAGUAAACCUUCUUUUAAAUUUGAACAUUU	61	0	128	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:145548-146144	Cluster_2773	Pocillopora_meandrina_HIv1___Sc0000008	145548	146144	597	5691	477	0.002635740643120717	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	902	11	5629	3	3	11	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:234987-235415	Cluster_2774	Pocillopora_meandrina_HIv1___Sc0000008	234987	235415	429	166	34	0.0	-	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	34	0	165	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:636585-637181	Cluster_2775	Pocillopora_meandrina_HIv1___Sc0000008	636585	637181	597	5643	496	0.001949317738791423	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	872	11	5603	2	2	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:806592-807009	Cluster_2776	Pocillopora_meandrina_HIv1___Sc0000008	806592	807009	418	141	5	0.014184397163120567	-	AAGGUGAACAAAGCGAUA	110	140	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:930857-931348	Cluster_2777	Pocillopora_meandrina_HIv1___Sc0000008	930857	931348	492	213	104	0.704225352112676	.	UCCGAGUGGCUUUUUUAACUCCUGUAAUA	31	6	166	1	5	12	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:960182-960609	Cluster_2778	Pocillopora_meandrina_HIv1___Sc0000008	960182	960609	428	170	28	0.9941176470588236	+	UAUUAUUCAUCUGCUGUCUUUUUGCCUC	65	0	166	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1007000-1007429	Cluster_2779	Pocillopora_meandrina_HIv1___Sc0000008	1007000	1007429	430	165	38	0.030303030303030304	-	UAAUGUGUGACUUUUUCGCUUUUGUUUUGA	64	0	164	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1058500-1058927	Cluster_2780	Pocillopora_meandrina_HIv1___Sc0000008	1058500	1058927	428	158	52	0.0379746835443038	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	43	2	153	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1311747-1312175	Cluster_2781	Pocillopora_meandrina_HIv1___Sc0000008	1311747	1312175	429	160	30	0.00625	-	AAGAUGUCGAGCGUUUUCCGAACGGAUUG	56	2	142	1	0	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1344713-1345210	Cluster_2782	Pocillopora_meandrina_HIv1___Sc0000008	1344713	1345210	498	158	34	0.04430379746835443	-	UUAUGAGUGAACCUUUCAUCGAGAAACAUG	52	2	154	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1506278-1506707	Cluster_2783	Pocillopora_meandrina_HIv1___Sc0000008	1506278	1506707	430	255	51	0.00392156862745098	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	83	0	253	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1603033-1603626	Cluster_2784	Pocillopora_meandrina_HIv1___Sc0000008	1603033	1603626	594	431	299	0.9837587006960556	+	UCACGCCGGCAUGGAUGAACC	9	137	145	50	32	38	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1604006-1604500	Cluster_2785	Pocillopora_meandrina_HIv1___Sc0000008	1604006	1604500	495	454	325	1.0	+	CAUGAUGUGAUUUCGGGACCGACU	8	86	224	28	39	30	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1604636-1605096	Cluster_2786	Pocillopora_meandrina_HIv1___Sc0000008	1604636	1605096	461	474	320	1.0	+	CUGAUGAACUGACACGCCACAUGC	9	126	182	64	37	19	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1605572-1606131	Cluster_2787	Pocillopora_meandrina_HIv1___Sc0000008	1605572	1606131	560	487	263	0.9958932238193019	+	GAUGUUGACUGUUUAUCAAGGA	17	63	279	25	40	37	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1783802-1783891	Cluster_2788	Pocillopora_meandrina_HIv1___Sc0000008	1783802	1783891	90	1052	81	1.0	+	UAUGUUUUGGCUUGUUCCCA	330	915	11	105	14	5	2	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:1803785-1804208	Cluster_2789	Pocillopora_meandrina_HIv1___Sc0000008	1803785	1804208	424	18423	223	0.9996200401671823	+	CAAUGUUUCGGCUUGUUCCCG	9003	2316	12	15336	346	401	12	21	N	adi-miR-P-novel-6-3p_Acropora_digitifera__Praher_et_al._2021_NA;spi-mir-temp-14_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000008:1917222-1917651	Cluster_2790	Pocillopora_meandrina_HIv1___Sc0000008	1917222	1917651	430	173	42	0.0	-	UGCAACAUGCUUUUUCAUCGUGCUGGACUG	59	1	170	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1921314-1922472	Cluster_2791	Pocillopora_meandrina_HIv1___Sc0000008	1921314	1922472	1159	1230	377	0.01951219512195122	-	UGGUCACGUCAUACUUCUGAAUCUUCAAC	247	8	1194	6	3	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1929792-1930221	Cluster_2792	Pocillopora_meandrina_HIv1___Sc0000008	1929792	1930221	430	311	86	0.06430868167202572	-	UGAACAAGUGAGCAAGAUGAUCUUCAUGAA	113	0	298	0	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1931349-1931776	Cluster_2793	Pocillopora_meandrina_HIv1___Sc0000008	1931349	1931776	428	139	42	0.0	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	26	0	131	2	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1933348-1934418	Cluster_2794	Pocillopora_meandrina_HIv1___Sc0000008	1933348	1934418	1071	3822	766	0.3275771847200419	.	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	314	32	3639	29	16	58	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1940796-1941223	Cluster_2795	Pocillopora_meandrina_HIv1___Sc0000008	1940796	1941223	428	72	14	0.9861111111111112	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	0	72	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1947796-1948211	Cluster_2796	Pocillopora_meandrina_HIv1___Sc0000008	1947796	1948211	416	125	56	0.0	-	UGUGACUCUGGCUUGUAGAGAGAUUCUGG	13	1	123	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1982268-1982695	Cluster_2797	Pocillopora_meandrina_HIv1___Sc0000008	1982268	1982695	428	124	51	0.016129032258064516	-	UUGGAAGAUUUUGUAGACACAACUGACA	43	0	115	2	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1986496-1986975	Cluster_2798	Pocillopora_meandrina_HIv1___Sc0000008	1986496	1986975	480	5447	278	0.8224710850009179	+	UAUGUUCAGGUUGGGCGAGAUGGAUUCGUC	1272	16	5347	15	13	21	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1988270-1990998	Cluster_2799	Pocillopora_meandrina_HIv1___Sc0000008	1988270	1990998	2729	10156	2062	0.007187869239858212	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1242	24	9911	16	56	46	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2002298-2002723	Cluster_2800	Pocillopora_meandrina_HIv1___Sc0000008	2002298	2002723	426	187	60	0.0	-	UGCUCUGAUUGUCUGGCCUUGACCCAGUU	29	0	183	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2004591-2005854	Cluster_2801	Pocillopora_meandrina_HIv1___Sc0000008	2004591	2005854	1264	10648	940	0.05803906836964688	-	UAUUGACAAUGAAUUCGAGACUGACAGUG	2470	62	10095	26	138	83	244	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2007397-2007827	Cluster_2802	Pocillopora_meandrina_HIv1___Sc0000008	2007397	2007827	431	6497	323	0.00015391719255040788	-	UUUGUCACCUCCUUGACUGCUCCUUGAC	1655	7	6391	8	9	5	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2012234-2013269	Cluster_2803	Pocillopora_meandrina_HIv1___Sc0000008	2012234	2013269	1036	3056	553	0.010798429319371727	-	UAUGUCAACUGCUGUCCCUUCUUUUAAAU	897	43	2873	16	25	41	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2013407-2013886	Cluster_2804	Pocillopora_meandrina_HIv1___Sc0000008	2013407	2013886	480	4876	278	0.009433962264150943	-	UUGUCUACAAGAAGCCUGUCCAUUUUGU	3647	220	4612	10	10	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2013935-2014362	Cluster_2805	Pocillopora_meandrina_HIv1___Sc0000008	2013935	2014362	428	400	55	0.0	-	UAGUCCUAAUCAGUCAUUAAAUUUGGUU	197	0	395	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2018903-2021489	Cluster_2806	Pocillopora_meandrina_HIv1___Sc0000008	2018903	2021489	2587	44696	2123	0.01163415070699839	-	UUUCCGUUGCAUUUGAAGACUUCUUGUUAGA	15780	161	43763	167	149	121	335	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2022209-2022636	Cluster_2807	Pocillopora_meandrina_HIv1___Sc0000008	2022209	2022636	428	190	93	0.07894736842105263	-	UGACGUCACGAUCUUUGCGCGCUACCAUU	23	4	176	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2030130-2031953	Cluster_2808	Pocillopora_meandrina_HIv1___Sc0000008	2030130	2031953	1824	26620	2896	0.066190833959429	-	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2261	215	25238	79	157	339	592	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2032341-2036410	Cluster_2809	Pocillopora_meandrina_HIv1___Sc0000008	2032341	2036410	4070	93169	4381	0.18271098756023998	-	CACCAAGGUCUUGUAGUCCAGUACAACU	27356	504	89874	252	305	378	1856	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2038208-2038801	Cluster_2810	Pocillopora_meandrina_HIv1___Sc0000008	2038208	2038801	594	525	138	0.009523809523809525	-	UCAACAGCCUGAACUUGUCUUCACAAGACU	122	6	512	0	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2046339-2046752	Cluster_2811	Pocillopora_meandrina_HIv1___Sc0000008	2046339	2046752	414	121	58	0.0	-	UAAUCUGUCUGUUUCUCGGUCGAAGAAUC	35	2	117	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2047849-2048276	Cluster_2812	Pocillopora_meandrina_HIv1___Sc0000008	2047849	2048276	428	224	119	0.07142857142857142	-	UGUGUGCCUUUCUGAGCUGUCUGAUUUC	16	13	201	2	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2098378-2098857	Cluster_2813	Pocillopora_meandrina_HIv1___Sc0000008	2098378	2098857	480	11796	843	0.00016954899966090201	-	UACAAACAAGUUAAAAUUCUGAGCAGG	796	2998	5983	706	306	747	1056	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2099154-2099629	Cluster_2814	Pocillopora_meandrina_HIv1___Sc0000008	2099154	2099629	476	13573	603	0.0	-	CUGCGAUGAUGACUUAACUUAGGACA	4220	3258	7401	927	388	567	1032	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2104385-2104865	Cluster_2815	Pocillopora_meandrina_HIv1___Sc0000008	2104385	2104865	481	1445	297	0.0	-	UGUGGUGAUGACUUAACUUAGGACA	268	331	705	74	89	114	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2226362-2226785	Cluster_2816	Pocillopora_meandrina_HIv1___Sc0000008	2226362	2226785	424	203	127	0.9901477832512315	+	GACGAUGAUUGUCACUACGUGGUU	31	34	65	14	22	14	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2226881-2227302	Cluster_2817	Pocillopora_meandrina_HIv1___Sc0000008	2226881	2227302	422	235	154	1.0	+	AUUCGAUCAGAGAUGGACA	12	67	58	29	48	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2242788-2244155	Cluster_2818	Pocillopora_meandrina_HIv1___Sc0000008	2242788	2244155	1368	4222	965	0.18995736617716721	-	UGCUGCAUGUCUACUUGUCGAAGUCCUGGC	258	50	3501	46	26	169	430	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2244212-2244632	Cluster_2819	Pocillopora_meandrina_HIv1___Sc0000008	2244212	2244632	421	136	68	0.25735294117647056	.	UAGAAUCUCUUCACCUAUAUGCAUCAU	22	1	128	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2257513-2258066	Cluster_2820	Pocillopora_meandrina_HIv1___Sc0000008	2257513	2258066	554	329	149	0.6838905775075987	.	UGACUUUAUUUGCGUCACGGAUUAGCUGG	25	2	260	4	11	27	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2517345-2517765	Cluster_2821	Pocillopora_meandrina_HIv1___Sc0000008	2517345	2517765	421	112	52	0.0	-	AGUGGUGAUGAAAUUUUUGGU	9	21	40	14	19	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2593578-2594011	Cluster_2822	Pocillopora_meandrina_HIv1___Sc0000008	2593578	2594011	434	1008	195	0.06448412698412699	-	UGUUUCAACUCUUGAAUGAUUCUUGCUU	147	2	983	6	1	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2703702-2704150	Cluster_2823	Pocillopora_meandrina_HIv1___Sc0000008	2703702	2704150	449	1075	155	0.22790697674418606	.	UAGGAUAUAUCACUUGCGUAAUUUACA	205	21	1008	5	10	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2818399-2818824	Cluster_2824	Pocillopora_meandrina_HIv1___Sc0000008	2818399	2818824	426	127	34	0.9921259842519685	+	AACUACUGCUCGUACUCUAGAUGACAAUCA	20	0	126	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3044995-3045591	Cluster_2825	Pocillopora_meandrina_HIv1___Sc0000008	3044995	3045591	597	5742	494	0.0041797283176593526	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	900	6	5678	8	9	8	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3152146-3152630	Cluster_2826	Pocillopora_meandrina_HIv1___Sc0000008	3152146	3152630	485	503	174	0.003976143141153081	-	UACAAAGCUCUCACGAAUUCACAAACAGA	59	4	496	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3153032-3154167	Cluster_2827	Pocillopora_meandrina_HIv1___Sc0000008	3153032	3154167	1136	1378	540	0.006531204644412192	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	101	9	1337	3	6	17	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3154288-3155164	Cluster_2828	Pocillopora_meandrina_HIv1___Sc0000008	3154288	3155164	877	919	399	0.017410228509249184	-	UGCUGAAACGAUUUUGACAGGUUGUCA	56	5	875	1	8	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3155441-3156025	Cluster_2829	Pocillopora_meandrina_HIv1___Sc0000008	3155441	3156025	585	953	337	0.0062959076600209865	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	96	4	939	1	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3489845-3490273	Cluster_2830	Pocillopora_meandrina_HIv1___Sc0000008	3489845	3490273	429	152	43	1.0	+	UCCGAUUCAGACUCCGAACUUGAUUUUGA	41	5	140	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3576420-3576514	Cluster_2831	Pocillopora_meandrina_HIv1___Sc0000008	3576420	3576514	95	301	45	1.0	+	CGAUGGAACACACAAGUAGAGA	89	31	9	14	185	60	2	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:3603048-3603467	Cluster_2832	Pocillopora_meandrina_HIv1___Sc0000008	3603048	3603467	420	257	6	0.0	-	UAUGUUGCUCGGGUUUUUGA	252	254	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3619341-3619435	Cluster_2833	Pocillopora_meandrina_HIv1___Sc0000008	3619341	3619435	95	366	65	0.00546448087431694	-	UGUGCUUUGGUUCAAAAAUGUC	148	65	6	15	212	56	12	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:3682573-3683023	Cluster_2834	Pocillopora_meandrina_HIv1___Sc0000008	3682573	3683023	451	626	80	1.0	+	UCUUGGAGUGUAUCUACAUGAGU	108	65	131	107	137	180	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3792737-3793149	Cluster_2835	Pocillopora_meandrina_HIv1___Sc0000008	3792737	3793149	413	348	253	0.005747126436781609	-	UCAAAGACUGAGGCCAGCAAGACUGAAGA	11	73	152	24	34	41	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3806432-3807174	Cluster_2836	Pocillopora_meandrina_HIv1___Sc0000008	3806432	3807174	743	822	359	0.006082725060827251	-	CAAACAAUUGCUGGCUGAUGGCU	44	178	285	96	71	119	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3945940-3946360	Cluster_2837	Pocillopora_meandrina_HIv1___Sc0000008	3945940	3946360	421	199	105	0.9949748743718593	+	UGUCAUAACGCUCUGUCCGAUCGCUGUA	10	2	191	3	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3947424-3948032	Cluster_2838	Pocillopora_meandrina_HIv1___Sc0000008	3947424	3948032	609	461	159	0.9869848156182213	+	UCUGACCCGUCACUGAAUAUGAUAAGAGU	95	3	447	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3948492-3949248	Cluster_2839	Pocillopora_meandrina_HIv1___Sc0000008	3948492	3949248	757	510	254	0.9803921568627451	+	UGAUUUUGAUAAACUCUGCUAUGUUCGGGA	36	5	489	4	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3949623-3950048	Cluster_2840	Pocillopora_meandrina_HIv1___Sc0000008	3949623	3950048	426	221	127	0.995475113122172	+	UGUCGUGUCUUUCAUCCGCUGUGGCGUA	11	2	206	0	6	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3950885-3951344	Cluster_2841	Pocillopora_meandrina_HIv1___Sc0000008	3950885	3951344	460	761	205	0.17345597897503284	-	UAAACAACAGAAAGUCCUUUGAAACGUG	246	5	744	3	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3961410-3963407	Cluster_2842	Pocillopora_meandrina_HIv1___Sc0000008	3961410	3963407	1998	4123	1379	0.09580402619451855	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	336	30	3845	25	34	57	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3963414-3963841	Cluster_2843	Pocillopora_meandrina_HIv1___Sc0000008	3963414	3963841	428	354	165	0.14689265536723164	-	UUGUCGUGAUCUUUCACUGCUUCUUGC	50	6	333	1	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3963959-3964385	Cluster_2844	Pocillopora_meandrina_HIv1___Sc0000008	3963959	3964385	427	192	85	0.041666666666666664	-	UGAACUUCUCGGCUCCAAACACUAUGG	56	1	181	2	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3964401-3964832	Cluster_2845	Pocillopora_meandrina_HIv1___Sc0000008	3964401	3964832	432	494	178	0.06882591093117409	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	57	2	466	7	1	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3965118-3966291	Cluster_2846	Pocillopora_meandrina_HIv1___Sc0000008	3965118	3966291	1174	945	395	0.07301587301587302	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	141	13	856	2	10	29	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3980226-3980655	Cluster_2847	Pocillopora_meandrina_HIv1___Sc0000008	3980226	3980655	430	1723	181	0.0075449796865931515	-	GGUUUCGUAGUGUAGUGG	407	1165	508	9	10	27	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4396995-4397415	Cluster_2848	Pocillopora_meandrina_HIv1___Sc0000008	4396995	4397415	421	121	26	0.01652892561983471	-	CGUAGAAUGACUGUUACCA	28	44	25	17	2	7	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4433244-4433661	Cluster_2849	Pocillopora_meandrina_HIv1___Sc0000008	4433244	4433661	418	90	9	1.0	+	AACUGUCUGAGUGUCUAU	63	85	3	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4541060-4541481	Cluster_2850	Pocillopora_meandrina_HIv1___Sc0000008	4541060	4541481	422	156	99	1.0	+	AGGGCAAGAACUGUCGAAGACA	14	19	64	6	23	28	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4701279-4701707	Cluster_2851	Pocillopora_meandrina_HIv1___Sc0000008	4701279	4701707	429	152	18	0.9671052631578947	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	64	0	152	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4946465-4946893	Cluster_2852	Pocillopora_meandrina_HIv1___Sc0000008	4946465	4946893	429	238	20	0.9915966386554622	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	97	1	236	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5387738-5387830	Cluster_2853	Pocillopora_meandrina_HIv1___Sc0000008	5387738	5387830	93	1515	131	0.0019801980198019802	-	AACUUUUCUACAAUUCCAGUGGA	274	246	37	131	391	660	50	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:5481836-5482255	Cluster_2854	Pocillopora_meandrina_HIv1___Sc0000008	5481836	5482255	420	474	26	1.0	+	CUUGAAGCGGUUGGAUCA	257	469	5	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5492891-5493311	Cluster_2855	Pocillopora_meandrina_HIv1___Sc0000008	5492891	5493311	421	234	14	1.0	+	CGGCUUGAAAAAAAAAAAAAA	57	151	0	62	20	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5816867-5817285	Cluster_2856	Pocillopora_meandrina_HIv1___Sc0000008	5816867	5817285	419	83	5	1.0	+	CCGGGGGAGACGAUGAUUC	77	82	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6100492-6100916	Cluster_2857	Pocillopora_meandrina_HIv1___Sc0000008	6100492	6100916	425	423	68	0.9976359338061466	+	UGGAAAGUGCGUACGAACGAUUU	119	22	4	10	195	160	32	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6124721-6125148	Cluster_2858	Pocillopora_meandrina_HIv1___Sc0000008	6124721	6125148	428	434	57	0.004608294930875576	-	UGAAAAGAACAAUGAUGUAGCUCGUGCA	320	6	421	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6125278-6125771	Cluster_2859	Pocillopora_meandrina_HIv1___Sc0000008	6125278	6125771	494	188	47	0.026595744680851064	-	UGAGAGUUACCACACAAUAAAAGAGUCAUU	37	6	179	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6307431-6308690	Cluster_2860	Pocillopora_meandrina_HIv1___Sc0000008	6307431	6308690	1260	11307	1476	0.029892986645440878	-	UCUGACUGACUAACAGGAUAUCUGCUUC	758	40	10975	34	39	67	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6310917-6311346	Cluster_2861	Pocillopora_meandrina_HIv1___Sc0000008	6310917	6311346	430	283	150	0.17667844522968199	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	1	252	3	2	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6312576-6313279	Cluster_2862	Pocillopora_meandrina_HIv1___Sc0000008	6312576	6313279	704	294	138	0.09183673469387756	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	37	2	279	2	2	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6374429-6374839	Cluster_2863	Pocillopora_meandrina_HIv1___Sc0000008	6374429	6374839	411	139	65	0.7050359712230215	.	AAUGACCCCGUAAAUCUGCG	9	88	2	38	11	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6516003-6516408	Cluster_2864	Pocillopora_meandrina_HIv1___Sc0000008	6516003	6516408	406	172	132	0.0	-	CGAAUGAUGAACAAUGAACGCUUC	4	35	72	15	15	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6516959-6517380	Cluster_2865	Pocillopora_meandrina_HIv1___Sc0000008	6516959	6517380	422	269	183	0.0	-	AGAAAAACGCUGCGGAUGU	8	112	83	22	17	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6523070-6523803	Cluster_2866	Pocillopora_meandrina_HIv1___Sc0000008	6523070	6523803	734	764	530	0.0013089005235602095	-	GAACGAUCAAGACUCGUCUGGGGAA	11	195	293	86	59	71	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6783256-6783685	Cluster_2867	Pocillopora_meandrina_HIv1___Sc0000008	6783256	6783685	430	228	24	0.0	-	AUGGCAAAAACACAUCUUACAUUGGCUGUA	185	2	224	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6870035-6870463	Cluster_2868	Pocillopora_meandrina_HIv1___Sc0000008	6870035	6870463	429	228	45	1.0	+	AAGUGUGAUCUUUCUCUUAUGUGGCUUUG	137	1	218	3	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6906017-6906501	Cluster_2869	Pocillopora_meandrina_HIv1___Sc0000008	6906017	6906501	485	2050	315	0.6882926829268292	.	UCAGAUCGUAUUUCCUCAGUGUACCAUA	277	3	1987	2	9	7	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6913071-6913566	Cluster_2870	Pocillopora_meandrina_HIv1___Sc0000008	6913071	6913566	496	1094	73	0.9762340036563071	+	UCACACCAAUGUCUUCAUCUGUUAGAGA	753	14	1058	4	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6918899-6919327	Cluster_2871	Pocillopora_meandrina_HIv1___Sc0000008	6918899	6919327	429	95	13	0.010526315789473684	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	42	0	95	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7168458-7168875	Cluster_2872	Pocillopora_meandrina_HIv1___Sc0000008	7168458	7168875	418	108	33	1.0	+	GCUGCGAUGGCCGAGUGG	37	91	5	4	6	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7228615-7229034	Cluster_2873	Pocillopora_meandrina_HIv1___Sc0000008	7228615	7229034	420	113	68	0.8407079646017699	+	CCGCAGCUCAGUGGGUAGAGCAUCUGACCG	8	30	45	16	10	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7351451-7351902	Cluster_2874	Pocillopora_meandrina_HIv1___Sc0000008	7351451	7351902	452	242	134	0.36363636363636365	.	UCAACGAUCACAAUCUUCCUUACUGCUC	13	5	212	1	0	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7352806-7353233	Cluster_2875	Pocillopora_meandrina_HIv1___Sc0000008	7352806	7353233	428	165	67	0.9393939393939394	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	5	151	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7698373-7699731	Cluster_2876	Pocillopora_meandrina_HIv1___Sc0000008	7698373	7699731	1359	6884	1584	0.21368390470656595	.	UUUUACACGAUGCUUUGCUUUGGCCUG	412	72	6087	35	307	157	226	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7722490-7722913	Cluster_2877	Pocillopora_meandrina_HIv1___Sc0000008	7722490	7722913	424	81	30	0.9629629629629629	+	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	29	2	78	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7924005-7924423	Cluster_2878	Pocillopora_meandrina_HIv1___Sc0000008	7924005	7924423	419	170	23	1.0	+	UGUCUGUCUGAGUGUCUGU	71	167	1	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7954481-7954898	Cluster_2879	Pocillopora_meandrina_HIv1___Sc0000008	7954481	7954898	418	144	91	0.9722222222222222	+	UCUUCGUACGGUGUGCUCGCAUGACUUCAA	8	3	135	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8271763-8272196	Cluster_2880	Pocillopora_meandrina_HIv1___Sc0000008	8271763	8272196	434	812	101	0.01847290640394089	-	UGAAGUUAUCCUAAACUGCAGACUUAGC	208	7	793	2	6	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8294890-8295318	Cluster_2881	Pocillopora_meandrina_HIv1___Sc0000008	8294890	8295318	429	114	21	0.9736842105263158	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	45	1	111	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8299092-8299520	Cluster_2882	Pocillopora_meandrina_HIv1___Sc0000008	8299092	8299520	429	171	67	0.0	-	UGUAUUUACAUUGUAUUGUGAUCGAGACUUG	21	1	169	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8324578-8324978	Cluster_2883	Pocillopora_meandrina_HIv1___Sc0000008	8324578	8324978	401	272	185	1.0	+	AUCAGCGAGCUCAGGAUGCCAU	5	84	93	30	27	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8326178-8326593	Cluster_2884	Pocillopora_meandrina_HIv1___Sc0000008	8326178	8326593	416	273	190	0.9963369963369964	+	AUCUAUGGUAACAUGACUGAAGACU	6	62	117	17	25	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8327199-8327617	Cluster_2885	Pocillopora_meandrina_HIv1___Sc0000008	8327199	8327617	419	256	174	1.0	+	GAUGGGACUUGUUAAAAGAGC	11	56	113	29	33	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8393840-8394264	Cluster_2886	Pocillopora_meandrina_HIv1___Sc0000008	8393840	8394264	425	179	113	1.0	+	AUAGGACCUUUGACUUAGAUAAGCA	28	20	111	14	6	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8428576-8428997	Cluster_2887	Pocillopora_meandrina_HIv1___Sc0000008	8428576	8428997	422	698	22	0.0	-	CGGCUUGAAAAAAAAAAAAA	153	449	0	121	71	56	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8460961-8461377	Cluster_2888	Pocillopora_meandrina_HIv1___Sc0000008	8460961	8461377	417	150	80	1.0	+	UGACAAUGAUGACUUGUUCUCCCACU	12	39	80	9	11	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8497463-8497917	Cluster_2889	Pocillopora_meandrina_HIv1___Sc0000008	8497463	8497917	455	419	76	0.9976133651551312	+	UUCCUUCAUCUGUUAAGUUAUU	92	20	80	15	125	48	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8601589-8602001	Cluster_2890	Pocillopora_meandrina_HIv1___Sc0000008	8601589	8602001	413	187	134	0.983957219251337	+	UGAGGAGACUGUGUCCAC	7	51	58	28	19	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8604004-8604428	Cluster_2891	Pocillopora_meandrina_HIv1___Sc0000008	8604004	8604428	425	290	199	1.0	+	CUACUGCAAGAAGGGACU	7	89	96	20	43	17	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8907187-8907932	Cluster_2892	Pocillopora_meandrina_HIv1___Sc0000008	8907187	8907932	746	1296	309	0.16512345679012347	-	UACCAUAGAACUUUCCAGAACAUUUCAUC	157	22	1069	16	16	131	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9290101-9290510	Cluster_2893	Pocillopora_meandrina_HIv1___Sc0000008	9290101	9290510	410	87	30	0.7126436781609196	.	UGUCCACCCCCCACCGGCUGC	17	3	52	17	8	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9406621-9407048	Cluster_2894	Pocillopora_meandrina_HIv1___Sc0000008	9406621	9407048	428	215	87	0.986046511627907	+	UCUGAAUUAUCCCGGGUCUCGGCAUUUUU	20	18	177	5	3	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9421657-9422081	Cluster_2895	Pocillopora_meandrina_HIv1___Sc0000008	9421657	9422081	425	75	23	0.0	-	UCAAUGUGUGAUAUCUGAGUAAACAGGGC	21	0	71	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9467065-9467478	Cluster_2896	Pocillopora_meandrina_HIv1___Sc0000008	9467065	9467478	414	261	195	0.0038314176245210726	-	AGAAUUUGGGCGUGCUGAUGAA	9	67	109	18	29	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9469902-9470319	Cluster_2897	Pocillopora_meandrina_HIv1___Sc0000008	9469902	9470319	418	272	189	0.003676470588235294	-	GAGAUGUAGAAAAAUGCAAGGAGU	5	67	110	22	24	19	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9479573-9479980	Cluster_2898	Pocillopora_meandrina_HIv1___Sc0000008	9479573	9479980	408	120	67	0.0	-	UACAUCUCUAGGUGCAGGACU	9	21	41	24	8	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9498200-9498707	Cluster_2899	Pocillopora_meandrina_HIv1___Sc0000008	9498200	9498707	508	1378	521	0.9927431059506531	+	CGUGAGACCUAAGGGGCU	73	538	402	109	115	119	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9701479-9701891	Cluster_2900	Pocillopora_meandrina_HIv1___Sc0000008	9701479	9701891	413	102	58	0.0	-	UGACGAUUUUCGCGGCUCGAUUUUGU	9	0	101	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9778406-9778836	Cluster_2901	Pocillopora_meandrina_HIv1___Sc0000008	9778406	9778836	431	351	89	0.019943019943019943	-	AGUGCAAAUACUCGUGAAAGCUGAUCGCGGU	39	5	292	36	6	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9845969-9846514	Cluster_2902	Pocillopora_meandrina_HIv1___Sc0000008	9845969	9846514	546	1206	236	0.03233830845771144	-	UAACACAACUCGCUUCCGGUCACGACA	188	8	1159	7	1	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9851650-9852069	Cluster_2903	Pocillopora_meandrina_HIv1___Sc0000008	9851650	9852069	420	99	15	0.0	-	AUCUGUGGUUUUUUUAGGGG	72	93	0	3	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9981438-9982373	Cluster_2904	Pocillopora_meandrina_HIv1___Sc0000008	9981438	9982373	936	453	176	0.9315673289183223	+	UGAAGCAAUGAAACUCUGCAAGGACACU	32	23	407	2	8	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9982614-9983087	Cluster_2905	Pocillopora_meandrina_HIv1___Sc0000008	9982614	9983087	474	718	208	0.41225626740947074	.	GAAGUCGAUAAGCGUUGGACUCAGAGU	57	15	661	7	8	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10037456-10037882	Cluster_2906	Pocillopora_meandrina_HIv1___Sc0000008	10037456	10037882	427	183	51	0.7595628415300546	.	UAGUAUAACUUUGAUCUGAUGAAAAUC	102	0	168	1	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10038202-10038630	Cluster_2907	Pocillopora_meandrina_HIv1___Sc0000008	10038202	10038630	429	379	50	0.9868073878627969	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	268	0	374	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10175853-10176394	Cluster_2908	Pocillopora_meandrina_HIv1___Sc0000008	10175853	10176394	542	356	185	0.0028089887640449437	-	GUGGAACAGCAGAAACUUGAUA	27	52	140	24	56	67	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10274843-10275273	Cluster_2909	Pocillopora_meandrina_HIv1___Sc0000008	10274843	10275273	431	165	24	0.9878787878787879	+	UGAGUAAACCUUCUUUUAAAUUUGAACAUUU	71	1	163	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10367613-10368074	Cluster_2910	Pocillopora_meandrina_HIv1___Sc0000008	10367613	10368074	462	15920	645	0.9974246231155779	+	GGGGAUAUAGCUCAGUGGUAGAGCAUU	3776	1565	9293	959	2194	548	1361	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10491245-10491671	Cluster_2911	Pocillopora_meandrina_HIv1___Sc0000008	10491245	10491671	427	188	84	0.03723404255319149	-	UGUUCUCGGUUAUCAGCUCAGAAAUGCG	17	0	182	1	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10492737-10493162	Cluster_2912	Pocillopora_meandrina_HIv1___Sc0000008	10492737	10493162	426	113	35	0.008849557522123894	-	UGUGUAGAUAUGUCUUUUGGACAGGA	36	0	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10559700-10560127	Cluster_2913	Pocillopora_meandrina_HIv1___Sc0000008	10559700	10560127	428	194	74	0.010309278350515464	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	3	185	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10632661-10633081	Cluster_2914	Pocillopora_meandrina_HIv1___Sc0000008	10632661	10633081	421	374	19	0.9973262032085561	+	UCUGACGAAGGGCUGACACUA	331	13	0	351	8	2	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10670925-10671345	Cluster_2915	Pocillopora_meandrina_HIv1___Sc0000008	10670925	10671345	421	145	83	0.034482758620689655	-	UGAUCAGGACUUUCAGCAUGGAAUAGA	15	8	125	3	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10678356-10679047	Cluster_2916	Pocillopora_meandrina_HIv1___Sc0000008	10678356	10679047	692	2098	985	0.9985700667302193	+	GUUAUCUGAACGGGGCUUACUCUCACUGUGU	51	564	986	137	146	143	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10871176-10871593	Cluster_2917	Pocillopora_meandrina_HIv1___Sc0000008	10871176	10871593	418	83	12	1.0	+	AACUUUUGACAGUGGAUCA	33	83	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10962997-10963435	Cluster_2918	Pocillopora_meandrina_HIv1___Sc0000008	10962997	10963435	439	315	76	0.21904761904761905	.	UAUAUUCACACGUGUUAUCUCGUCGCUCA	64	8	238	2	1	5	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11053590-11054013	Cluster_2919	Pocillopora_meandrina_HIv1___Sc0000008	11053590	11054013	424	108	54	1.0	+	UAGUGUAUACCUGACGGUUAUUUUUAAUC	18	3	104	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11058234-11058649	Cluster_2920	Pocillopora_meandrina_HIv1___Sc0000008	11058234	11058649	416	200	153	0.995	+	GAUGGUGCCUUGAGGAACUCU	6	37	90	27	12	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11119616-11120040	Cluster_2921	Pocillopora_meandrina_HIv1___Sc0000008	11119616	11120040	425	86	33	0.12790697674418605	-	UUGUAUUUGCUGAUCUAUUUGACAUCCA	17	3	73	2	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11124758-11125185	Cluster_2922	Pocillopora_meandrina_HIv1___Sc0000008	11124758	11125185	428	151	38	0.9933774834437086	+	UGUAAACGGUCUUCUUCAAAUUUCUGGC	47	1	150	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11127271-11127696	Cluster_2923	Pocillopora_meandrina_HIv1___Sc0000008	11127271	11127696	426	112	29	0.026785714285714284	-	GUUGACGUGAACGGUGUUAGAUGCCGAGC	38	0	108	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11171418-11171956	Cluster_2924	Pocillopora_meandrina_HIv1___Sc0000008	11171418	11171956	539	854	169	0.9988290398126464	+	GUUUUUACCUUCUGGCUGACUGACAGUU	57	199	524	43	19	41	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:107419-107866	Cluster_2925	Pocillopora_meandrina_HIv1___Sc0000009	107419	107866	448	197	65	0.9898477157360406	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	38	2	192	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:108027-108511	Cluster_2926	Pocillopora_meandrina_HIv1___Sc0000009	108027	108511	485	351	200	0.8233618233618234	+	UGAUUCCGCGCUUAUGACUCGUCCCAU	19	6	295	1	4	15	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:108687-111195	Cluster_2927	Pocillopora_meandrina_HIv1___Sc0000009	108687	111195	2509	4277	1368	0.9240121580547113	+	UGUACAACCAUCCGAUACUCUUGU	696	37	2971	16	28	71	1154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:111410-113227	Cluster_2928	Pocillopora_meandrina_HIv1___Sc0000009	111410	113227	1818	2097	939	0.8588459704339533	+	UCCGAGAGCUUUGUUCACAUAGGCCAUU	70	102	1818	26	30	33	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:113573-114658	Cluster_2929	Pocillopora_meandrina_HIv1___Sc0000009	113573	114658	1086	1406	578	0.8613086770981507	+	UACAAUAACCUCUGAUUUCACUAAAUG	75	14	1279	6	18	18	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:116221-116648	Cluster_2930	Pocillopora_meandrina_HIv1___Sc0000009	116221	116648	428	270	111	0.12222222222222222	-	AGUAGUUUCACUCUUUGGGCAAAAUAUU	68	17	237	9	4	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:140077-140504	Cluster_2931	Pocillopora_meandrina_HIv1___Sc0000009	140077	140504	428	126	41	0.023809523809523808	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	56	2	117	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:140963-141383	Cluster_2932	Pocillopora_meandrina_HIv1___Sc0000009	140963	141383	421	205	126	0.00975609756097561	-	AAUGAAAUGUUUAAACGAAAAUAGUAGAAU	11	5	189	4	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:143286-143715	Cluster_2933	Pocillopora_meandrina_HIv1___Sc0000009	143286	143715	430	1027	77	0.0	-	UGCAGUGGUUUUCUGGAUCCUGAUUGGUG	365	12	1004	9	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:171844-172273	Cluster_2934	Pocillopora_meandrina_HIv1___Sc0000009	171844	172273	430	200	57	0.02	-	GGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	20	6	188	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:201573-202002	Cluster_2935	Pocillopora_meandrina_HIv1___Sc0000009	201573	202002	430	868	129	0.009216589861751152	-	UUCGAUCCUAAAUUCUCUCCAUGCUUCUG	234	13	756	12	13	47	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:239910-241737	Cluster_2936	Pocillopora_meandrina_HIv1___Sc0000009	239910	241737	1828	27094	3001	0.9367756698900126	+	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2326	223	25729	102	125	358	557	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:282982-283409	Cluster_2937	Pocillopora_meandrina_HIv1___Sc0000009	282982	283409	428	164	59	0.024390243902439025	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	58	2	155	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:286345-286774	Cluster_2938	Pocillopora_meandrina_HIv1___Sc0000009	286345	286774	430	448	92	0.0	-	GGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	62	6	429	3	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:331520-331945	Cluster_2939	Pocillopora_meandrina_HIv1___Sc0000009	331520	331945	426	155	78	0.6387096774193548	.	AACUACUUGAACUGGUUCGCCUUAAUGA	16	5	117	23	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:349357-349766	Cluster_2940	Pocillopora_meandrina_HIv1___Sc0000009	349357	349766	410	80	42	0.0125	-	UGCUGUGGUUCUUUGGAUCCUGAUUGGUG	12	6	69	1	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:363140-363673	Cluster_2941	Pocillopora_meandrina_HIv1___Sc0000009	363140	363673	534	3559	234	0.6934532171958415	.	UUACUUAAAUGUUAUUGGUUUGU	759	41	1056	18	1146	1215	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:366415-366844	Cluster_2942	Pocillopora_meandrina_HIv1___Sc0000009	366415	366844	430	990	79	0.0	-	UGCAGUGGUUUUCUGGAUCCUGAUUGGUG	391	16	970	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:447553-447981	Cluster_2943	Pocillopora_meandrina_HIv1___Sc0000009	447553	447981	429	308	41	0.003246753246753247	-	UAGGACAACUGAGAAUCCACGUAGACUC	129	0	304	0	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:478711-479133	Cluster_2944	Pocillopora_meandrina_HIv1___Sc0000009	478711	479133	423	295	195	0.29491525423728815	.	CAUCACAUCGUCCACUCUGGCC	12	68	110	28	34	24	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:479265-479689	Cluster_2945	Pocillopora_meandrina_HIv1___Sc0000009	479265	479689	425	229	104	0.0	-	CACGUCACUGUCAAAAAA	36	73	95	17	8	9	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:480273-481323	Cluster_2946	Pocillopora_meandrina_HIv1___Sc0000009	480273	481323	1051	1740	576	0.0	-	GCAGUAUGAUGAAAGAUUAUGA	155	315	849	116	241	105	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:504251-504671	Cluster_2947	Pocillopora_meandrina_HIv1___Sc0000009	504251	504671	421	391	26	0.028132992327365727	-	CACUUCCUGGAGUUAAGGCU	139	250	1	135	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:539163-539602	Cluster_2948	Pocillopora_meandrina_HIv1___Sc0000009	539163	539602	440	407	191	0.0343980343980344	-	UGCGGCAUGACCUUUGAAAGGCA	20	67	152	28	62	66	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:554654-555074	Cluster_2949	Pocillopora_meandrina_HIv1___Sc0000009	554654	555074	421	137	73	0.6058394160583942	.	GUGGAGUUAAAAGAAGGGACAACA	13	12	90	7	2	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:691221-691863	Cluster_2950	Pocillopora_meandrina_HIv1___Sc0000009	691221	691863	643	861	442	0.0	-	AAUCUUUCGCAGCAUUUUAGACU	34	199	302	53	96	137	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:692538-692952	Cluster_2951	Pocillopora_meandrina_HIv1___Sc0000009	692538	692952	415	125	60	0.008	-	UCAAGAUCUUUCUGUGCAUCCUCUCAUGAA	16	1	122	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:698404-698818	Cluster_2952	Pocillopora_meandrina_HIv1___Sc0000009	698404	698818	415	96	62	0.010416666666666666	-	AGAUGGAAAAAAUUGUGAUCUUUGCA	11	14	57	3	8	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:700978-701398	Cluster_2953	Pocillopora_meandrina_HIv1___Sc0000009	700978	701398	421	153	100	0.0	-	AGAAAGGCGUUGGUGCAGGAGACA	5	48	43	22	13	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:710225-710651	Cluster_2954	Pocillopora_meandrina_HIv1___Sc0000009	710225	710651	427	116	38	0.6293103448275862	.	UCUUUCCAUUUACAGACUCAAGUGGCUGC	21	1	110	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1103767-1104214	Cluster_2955	Pocillopora_meandrina_HIv1___Sc0000009	1103767	1104214	448	2731	268	0.9538630538264372	+	UGAGACAGUACACACGAUUUGAUAU	680	16	2675	2	4	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1104286-1104715	Cluster_2956	Pocillopora_meandrina_HIv1___Sc0000009	1104286	1104715	430	7183	236	0.9901155506055965	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	2052	17	6931	97	12	13	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1144894-1145321	Cluster_2957	Pocillopora_meandrina_HIv1___Sc0000009	1144894	1145321	428	99	32	0.010101010101010102	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	24	0	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1362205-1363105	Cluster_2958	Pocillopora_meandrina_HIv1___Sc0000009	1362205	1363105	901	1276	345	0.8926332288401254	+	UGAAAUCGUCUAAACGAGAUAACAUCUGCUU	133	6	1188	33	3	10	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1446195-1446622	Cluster_2959	Pocillopora_meandrina_HIv1___Sc0000009	1446195	1446622	428	187	69	0.9786096256684492	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	28	4	174	2	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1447923-1448623	Cluster_2960	Pocillopora_meandrina_HIv1___Sc0000009	1447923	1448623	701	186	78	0.9623655913978495	+	UAUUUGCACCGUUUUUCUUGAAUAUAGA	21	2	179	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1449346-1450172	Cluster_2961	Pocillopora_meandrina_HIv1___Sc0000009	1449346	1450172	827	391	100	0.9948849104859335	+	UAGGACAACUGAGAAUCCACGUAGACUC	104	1	380	0	7	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1753899-1754316	Cluster_2962	Pocillopora_meandrina_HIv1___Sc0000009	1753899	1754316	418	149	14	0.9731543624161074	+	CGGCCUGAAAAAAAAAAA	97	146	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1834616-1835044	Cluster_2963	Pocillopora_meandrina_HIv1___Sc0000009	1834616	1835044	429	191	36	0.9424083769633508	+	UUUGAUCUUGAAAUUAUGAUACCUGGAA	69	1	188	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1843950-1844472	Cluster_2964	Pocillopora_meandrina_HIv1___Sc0000009	1843950	1844472	523	894	256	0.8859060402684564	+	UGCUGAAAAUCUGGACUUCUCGUAGAGC	113	10	850	0	0	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2086374-2087156	Cluster_2965	Pocillopora_meandrina_HIv1___Sc0000009	2086374	2087156	783	813	219	0.993849938499385	+	UGAAAGAGAGCGUGCUGUCAAUAUUUAGAC	109	4	794	2	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2662023-2662460	Cluster_2966	Pocillopora_meandrina_HIv1___Sc0000009	2662023	2662460	438	374	121	0.029411764705882353	-	UCUAGACAAAUAACUCUGAUAUUUA	57	9	344	1	1	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2663671-2664213	Cluster_2967	Pocillopora_meandrina_HIv1___Sc0000009	2663671	2664213	543	336	110	0.5178571428571429	.	CUGGAGUGAAGAAAGAUUUGACCUUA	49	4	313	3	2	12	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3334049-3334475	Cluster_2968	Pocillopora_meandrina_HIv1___Sc0000009	3334049	3334475	427	116	42	0.25862068965517243	.	AUUUGUGCUAGAAAGAAUCCGCC	18	0	83	0	2	29	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3388788-3389212	Cluster_2969	Pocillopora_meandrina_HIv1___Sc0000009	3388788	3389212	425	83	30	0.012048192771084338	-	UGUGUAGAUAUGUCUUUUGGACAGGA	21	0	82	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3732208-3733282	Cluster_2970	Pocillopora_meandrina_HIv1___Sc0000009	3732208	3733282	1075	1018	473	0.06483300589390963	-	UGAGUUUGACGGUUUUGAUCCGAUGUUAUC	42	12	961	6	6	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3894900-3894992	Cluster_2971	Pocillopora_meandrina_HIv1___Sc0000009	3894900	3894992	93	578	48	0.0017301038062283738	-	UAGCAUAACAUUGUAAG	330	351	7	3	170	45	2	N	Y	Adi-Mir-2030_5p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2030-5p;_nve-miR-2030-5p;_spi-miR-temp-40;ami-nve-F-miR-2030-5p_Acropora_millepora_Praher_et_al._2021_NA;adi-nve-F-miR-2030_Acropora_digitifera__Praher_et_al._2021_NA;spi-mir-temp-40_Stylophora_pistillata_Liew_et_al._2014_Close_match_of_nve-miR-2030;eca-nve-F-miR-2030_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;miR-2030_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000009:3944407-3945811	Cluster_2972	Pocillopora_meandrina_HIv1___Sc0000009	3944407	3945811	1405	7638	1188	0.08182770358732652	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	1544	38	7195	26	25	105	249	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3945827-3947085	Cluster_2973	Pocillopora_meandrina_HIv1___Sc0000009	3945827	3947085	1259	1868	569	0.21680942184154176	.	UAACUCCGAUCCGAUGACCUAGAAAGUC	167	10	1728	2	35	36	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3947477-3948158	Cluster_2974	Pocillopora_meandrina_HIv1___Sc0000009	3947477	3948158	682	299	168	0.11036789297658862	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	24	3	276	2	2	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4102972-4103398	Cluster_2975	Pocillopora_meandrina_HIv1___Sc0000009	4102972	4103398	427	225	23	1.0	+	AAGAGAACUAAGAAAAAAAAAAAAAA	60	0	210	0	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4224263-4224675	Cluster_2976	Pocillopora_meandrina_HIv1___Sc0000009	4224263	4224675	413	69	16	0.0	-	CGGACCUCAGAUCAG	24	69	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4289447-4290159	Cluster_2977	Pocillopora_meandrina_HIv1___Sc0000009	4289447	4290159	713	643	191	0.10730948678071539	-	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	29	16	560	5	13	8	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4517540-4518080	Cluster_2978	Pocillopora_meandrina_HIv1___Sc0000009	4517540	4518080	541	573	144	0.774869109947644	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	170	0	555	4	0	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4558097-4558525	Cluster_2979	Pocillopora_meandrina_HIv1___Sc0000009	4558097	4558525	429	2700	81	0.0	-	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1653	6	2687	1	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4559322-4559742	Cluster_2980	Pocillopora_meandrina_HIv1___Sc0000009	4559322	4559742	421	82	33	0.012195121951219513	-	UUUUACGCAUGGGCUUUGAUGGU	15	2	58	2	1	18	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4705225-4705659	Cluster_2981	Pocillopora_meandrina_HIv1___Sc0000009	4705225	4705659	435	705	166	0.9276595744680851	+	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	54	21	629	8	8	3	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4744138-4744895	Cluster_2982	Pocillopora_meandrina_HIv1___Sc0000009	4744138	4744895	758	959	359	0.9374348279457768	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	77	5	934	5	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4746610-4747511	Cluster_2983	Pocillopora_meandrina_HIv1___Sc0000009	4746610	4747511	902	934	309	0.9079229122055674	+	UGAGACUUGUUGUUGGGUAACUGACGUG	126	9	877	5	5	12	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4747548-4749568	Cluster_2984	Pocillopora_meandrina_HIv1___Sc0000009	4747548	4749568	2021	6486	1667	0.803422756706753	+	UGAAGUCUGACCGGAAGAUCGCAUAGUC	475	179	5842	26	39	162	238	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4759035-4759464	Cluster_2985	Pocillopora_meandrina_HIv1___Sc0000009	4759035	4759464	430	310	52	0.0032258064516129032	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	147	2	307	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4760218-4760814	Cluster_2986	Pocillopora_meandrina_HIv1___Sc0000009	4760218	4760814	597	5594	498	0.002681444404719342	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	847	11	5540	3	6	7	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4775411-4776044	Cluster_2987	Pocillopora_meandrina_HIv1___Sc0000009	4775411	4776044	634	716	239	0.0712290502793296	-	UGUAGAAUCAAUCUGUUACUAAGACACC	114	4	674	9	6	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4800380-4800797	Cluster_2988	Pocillopora_meandrina_HIv1___Sc0000009	4800380	4800797	418	150	90	0.14666666666666667	-	UGUUGUCCUUUGUUCAGUCUGAUUAACC	11	0	145	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4801045-4802112	Cluster_2989	Pocillopora_meandrina_HIv1___Sc0000009	4801045	4802112	1068	948	320	0.0580168776371308	-	UGAUGUCUUCGACUGCAGAUCUGGCAGC	57	6	855	0	7	21	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4930947-4931371	Cluster_2990	Pocillopora_meandrina_HIv1___Sc0000009	4930947	4931371	425	129	37	0.007751937984496124	-	CGAUUGUAGCUCUGAUUUCCAU	14	13	69	5	19	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4943767-4944198	Cluster_2991	Pocillopora_meandrina_HIv1___Sc0000009	4943767	4944198	432	11451	226	0.0006113003231158851	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	3938	4	11444	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4948006-4948435	Cluster_2992	Pocillopora_meandrina_HIv1___Sc0000009	4948006	4948435	430	9917	207	0.0012100433598870627	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	6265	18	9801	12	9	15	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4983712-4984141	Cluster_2993	Pocillopora_meandrina_HIv1___Sc0000009	4983712	4984141	430	273	140	0.054945054945054944	-	GCAGCACCUGUACUAUGCCAGCCAUCCUAU	27	26	219	5	7	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4986241-4986667	Cluster_2994	Pocillopora_meandrina_HIv1___Sc0000009	4986241	4986667	427	168	89	0.023809523809523808	-	UGUGCUGCAAUUAACUGAGUUGGAGGAAC	32	17	124	5	6	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5001483-5001912	Cluster_2995	Pocillopora_meandrina_HIv1___Sc0000009	5001483	5001912	430	337	79	0.005934718100890208	-	UUUAGAAGCAUUGUCUGCUGGUCUUCCCA	89	8	309	4	3	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5013395-5013823	Cluster_2996	Pocillopora_meandrina_HIv1___Sc0000009	5013395	5013823	429	111	34	0.018018018018018018	-	GAAUUAAGGAGUGUCCACUUGAGCAGAGA	59	1	107	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5019555-5020111	Cluster_2997	Pocillopora_meandrina_HIv1___Sc0000009	5019555	5020111	557	606	276	0.9075907590759076	+	UACUCUGUUGGAUGCUCGUAUAUUAUUCAGC	42	14	555	4	4	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5020191-5020607	Cluster_2998	Pocillopora_meandrina_HIv1___Sc0000009	5020191	5020607	417	98	41	0.9795918367346939	+	UGGAAAUUCUGUCGGCUUCAGUGCCAC	20	0	96	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5039382-5039812	Cluster_2999	Pocillopora_meandrina_HIv1___Sc0000009	5039382	5039812	431	3399	236	0.0002942041776993233	-	CUUAGAAGCGUUGUCUGCUGGUCUUCCCA	884	40	3313	8	8	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5051287-5051715	Cluster_3000	Pocillopora_meandrina_HIv1___Sc0000009	5051287	5051715	429	287	62	0.0627177700348432	-	CCGUAUUUGAUUGCCGUUUGUUCUCUGC	83	17	257	1	6	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5065799-5066228	Cluster_3001	Pocillopora_meandrina_HIv1___Sc0000009	5065799	5066228	430	3648	162	0.0008223684210526315	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	1678	39	3099	9	49	241	211	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5076932-5077372	Cluster_3002	Pocillopora_meandrina_HIv1___Sc0000009	5076932	5077372	441	6992	322	0.007723112128146453	-	CGGUACUGGAAUUAACUGAGUUGGACG	1814	64	6680	24	77	68	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5151780-5152209	Cluster_3003	Pocillopora_meandrina_HIv1___Sc0000009	5151780	5152209	430	317	41	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	126	4	293	1	4	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5154880-5155308	Cluster_3004	Pocillopora_meandrina_HIv1___Sc0000009	5154880	5155308	429	236	59	0.0	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	63	0	228	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5167006-5167481	Cluster_3005	Pocillopora_meandrina_HIv1___Sc0000009	5167006	5167481	476	555	74	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	295	3	532	6	6	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5167505-5167932	Cluster_3006	Pocillopora_meandrina_HIv1___Sc0000009	5167505	5167932	428	86	17	0.9302325581395349	+	ACAACAACAAGGUCCUGUUAUGAAAAUG	43	2	79	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5195133-5195564	Cluster_3007	Pocillopora_meandrina_HIv1___Sc0000009	5195133	5195564	432	35579	454	0.0	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	14771	44	35422	32	27	22	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5199379-5199854	Cluster_3008	Pocillopora_meandrina_HIv1___Sc0000009	5199379	5199854	476	578	67	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	287	3	569	1	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5249163-5249601	Cluster_3009	Pocillopora_meandrina_HIv1___Sc0000009	5249163	5249601	439	215	111	0.10697674418604651	-	GCAGCACCUGUACUAUGCCAGCCAUCCUAUC	16	41	143	4	11	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5252241-5252692	Cluster_3010	Pocillopora_meandrina_HIv1___Sc0000009	5252241	5252692	452	32108	580	0.0060421078858851375	-	CGGUGCAGGAAUUAACUGAGUUGGACG	9523	836	27344	1286	889	764	989	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5312552-5312992	Cluster_3011	Pocillopora_meandrina_HIv1___Sc0000009	5312552	5312992	441	14323	422	0.0002094533268170076	-	AGUGCUAGAAUUAACUGAGUUGGACGAACU	2369	163	13771	134	119	83	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5350474-5350892	Cluster_3012	Pocillopora_meandrina_HIv1___Sc0000009	5350474	5350892	419	431	38	0.0	-	AACUUUUGACGGUGGA	204	430	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5381071-5381529	Cluster_3013	Pocillopora_meandrina_HIv1___Sc0000009	5381071	5381529	459	18513	652	0.015880732458272564	-	CGGUGCUGAAAUUAACUGAGUUGGAGA	3725	696	13064	273	454	770	3256	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5385814-5386269	Cluster_3014	Pocillopora_meandrina_HIv1___Sc0000009	5385814	5386269	456	1723	160	0.0011607661056297156	-	CUCAAGCCGAGCAGACUGCCUACAAUCUGUG	400	62	1622	15	4	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5426650-5427080	Cluster_3015	Pocillopora_meandrina_HIv1___Sc0000009	5426650	5427080	431	522	189	0.02490421455938697	-	ACAGCACCUGUACUAUGCCAGCCAUCCCAU	59	59	387	25	27	16	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5429088-5429525	Cluster_3016	Pocillopora_meandrina_HIv1___Sc0000009	5429088	5429525	438	1533	126	0.0	-	GGUGCAGGAAUUAACUGAGUUGGACGAACU	461	0	1519	1	5	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5461464-5461895	Cluster_3017	Pocillopora_meandrina_HIv1___Sc0000009	5461464	5461895	432	4016	287	0.004233067729083665	-	AGUGCAGGAAUUAACUGAGUUGGACAAACU	927	79	3797	49	26	23	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5465756-5466183	Cluster_3018	Pocillopora_meandrina_HIv1___Sc0000009	5465756	5466183	428	85	29	0.0	-	GAAUUAAGGAGUGUCCACUUGAGCAGAGA	47	7	77	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5521032-5521460	Cluster_3019	Pocillopora_meandrina_HIv1___Sc0000009	5521032	5521460	429	163	59	0.0	-	CUUAGAAGCAUUGUCUGCUGGUCUUCCCA	36	8	148	2	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5528777-5529186	Cluster_3020	Pocillopora_meandrina_HIv1___Sc0000009	5528777	5529186	410	79	27	0.012658227848101266	-	GCAGCACCUGUACUAUGCCAGCCAUCCUA	12	8	69	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5531819-5532250	Cluster_3021	Pocillopora_meandrina_HIv1___Sc0000009	5531819	5532250	432	29851	326	0.0001339988610096814	-	UGUGCUAGAAUUAACUGAGUUGGAGAAACU	12023	157	27318	117	60	2092	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5573593-5574021	Cluster_3022	Pocillopora_meandrina_HIv1___Sc0000009	5573593	5574021	429	4176	102	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	2746	11	4113	10	3	6	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5616752-5617179	Cluster_3023	Pocillopora_meandrina_HIv1___Sc0000009	5616752	5617179	428	150	51	0.08	-	GCAGCACCUGUACUAUGCCAGUCAUCCCA	23	25	116	2	4	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5619718-5620348	Cluster_3024	Pocillopora_meandrina_HIv1___Sc0000009	5619718	5620348	631	16692	409	0.006290438533429188	-	GGUGCAGGAAUUAACUGAGUUGGACGAACU	4609	229	15797	140	195	118	213	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5624158-5624633	Cluster_3025	Pocillopora_meandrina_HIv1___Sc0000009	5624158	5624633	476	2917	130	0.00034281796366129587	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	1817	8	2859	6	3	5	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5631674-5632098	Cluster_3026	Pocillopora_meandrina_HIv1___Sc0000009	5631674	5632098	425	623	141	0.9935794542536116	+	GUUAACGAACGAGACCUUGACCUGU	70	350	108	32	58	38	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5651649-5652072	Cluster_3027	Pocillopora_meandrina_HIv1___Sc0000009	5651649	5652072	424	92	39	0.021739130434782608	-	UACUCCGACACUCCGAUAUGUGAUACUAC	32	0	85	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5684055-5684484	Cluster_3028	Pocillopora_meandrina_HIv1___Sc0000009	5684055	5684484	430	388	120	0.002577319587628866	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	95	9	363	2	6	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5689078-5689507	Cluster_3029	Pocillopora_meandrina_HIv1___Sc0000009	5689078	5689507	430	285	132	0.18596491228070175	-	GCAGCACCUGUACUAUGCCAGCCAUCCUA	26	34	221	9	6	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5691732-5692175	Cluster_3030	Pocillopora_meandrina_HIv1___Sc0000009	5691732	5692175	444	2969	217	0.06096328730212193	-	GGUGCUGGAAUUAACUGAGUUGGAAGAAC	787	270	2197	85	78	60	279	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5696195-5696623	Cluster_3031	Pocillopora_meandrina_HIv1___Sc0000009	5696195	5696623	429	284	29	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	195	2	276	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5749814-5750260	Cluster_3032	Pocillopora_meandrina_HIv1___Sc0000009	5749814	5750260	447	418	120	0.20574162679425836	.	GCAGCACCUGUACUAUGCCAGCCAUCCUA	64	39	355	3	9	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5753007-5753436	Cluster_3033	Pocillopora_meandrina_HIv1___Sc0000009	5753007	5753436	430	464	81	0.010775862068965518	-	UGUGCUAGAAUUAACUGAGUUGGAGAAAUU	184	7	376	7	10	49	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5808018-5808447	Cluster_3034	Pocillopora_meandrina_HIv1___Sc0000009	5808018	5808447	430	364	56	0.005494505494505495	-	AAGAAUGCGAUAGCCGAUAAAGAAACUACU	182	5	347	0	1	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5818362-5818790	Cluster_3035	Pocillopora_meandrina_HIv1___Sc0000009	5818362	5818790	429	635	125	0.004724409448818898	-	GGUGCUGGAAUUAACUGAGUUGC	203	43	215	25	21	237	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5821920-5822373	Cluster_3036	Pocillopora_meandrina_HIv1___Sc0000009	5821920	5822373	454	254	80	0.9763779527559056	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	38	2	244	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5822529-5822956	Cluster_3037	Pocillopora_meandrina_HIv1___Sc0000009	5822529	5822956	428	347	202	0.8645533141210374	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	21	4	303	4	5	7	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5823290-5827409	Cluster_3038	Pocillopora_meandrina_HIv1___Sc0000009	5823290	5827409	4120	7219	2405	0.9211802188668791	+	UGUACAACCAUCCGAUACUCUUGU	674	89	5718	29	62	116	1205	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5828011-5829182	Cluster_3039	Pocillopora_meandrina_HIv1___Sc0000009	5828011	5829182	1172	1398	560	0.8719599427753935	+	UACAAUAACCUCUGAUUUCACUAAAUG	58	8	1293	8	15	33	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5846449-5846895	Cluster_3040	Pocillopora_meandrina_HIv1___Sc0000009	5846449	5846895	447	678	153	0.08702064896755163	-	AAGAAUGUGAUAGCCAAUAAAGAAAGUACU	145	20	588	4	2	15	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5849548-5850049	Cluster_3041	Pocillopora_meandrina_HIv1___Sc0000009	5849548	5850049	502	426	135	0.0	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	69	4	408	0	4	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5856285-5856688	Cluster_3042	Pocillopora_meandrina_HIv1___Sc0000009	5856285	5856688	404	100	47	0.62	.	CCAGUUCCACCAUCUCACCAAU	28	10	30	4	46	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5856893-5857324	Cluster_3043	Pocillopora_meandrina_HIv1___Sc0000009	5856893	5857324	432	16403	306	0.00024385783088459427	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	7043	9	16369	7	3	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5959840-5960535	Cluster_3044	Pocillopora_meandrina_HIv1___Sc0000009	5959840	5960535	696	1602	234	0.9956304619225967	+	UCCAAUCCCCACCGAGAAAGUAUUCAAUAUU	498	10	1564	7	3	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5961241-5961669	Cluster_3045	Pocillopora_meandrina_HIv1___Sc0000009	5961241	5961669	429	303	87	1.0	+	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	63	2	292	0	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6213599-6214133	Cluster_3046	Pocillopora_meandrina_HIv1___Sc0000009	6213599	6214133	535	2628	305	0.9341704718417048	+	UGAGACAGUACACACGAUUUGAUAU	565	6	2564	5	4	31	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6222493-6223187	Cluster_3047	Pocillopora_meandrina_HIv1___Sc0000009	6222493	6223187	695	454	204	0.00881057268722467	-	UCUUCAUGAUUUCUUCUACUUUGAAUGUGGC	34	3	441	2	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6234760-6235163	Cluster_3048	Pocillopora_meandrina_HIv1___Sc0000009	6234760	6235163	404	147	49	0.4897959183673469	.	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	44	0	142	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6235924-6236346	Cluster_3049	Pocillopora_meandrina_HIv1___Sc0000009	6235924	6236346	423	122	71	0.6885245901639344	.	UCCCCUAAGGGAGGCUGUGAACUAAUUUUU	9	35	58	19	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6242821-6243422	Cluster_3050	Pocillopora_meandrina_HIv1___Sc0000009	6242821	6243422	602	3050	317	0.9370491803278689	+	UGAAUACACAUUACCAGUGAACUUGACUAC	601	13	2901	14	7	27	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6244745-6246358	Cluster_3051	Pocillopora_meandrina_HIv1___Sc0000009	6244745	6246358	1614	1202	327	0.48169717138103163	.	GAAGAAAAUAUUAAAGGAAAAAGGAAUGAC	99	20	1128	7	15	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6247110-6247722	Cluster_3052	Pocillopora_meandrina_HIv1___Sc0000009	6247110	6247722	613	821	281	0.3934226552984166	.	AAAGAGCUGAAAAAAAGAAUGUUUC	131	29	714	11	7	23	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6368613-6369361	Cluster_3053	Pocillopora_meandrina_HIv1___Sc0000009	6368613	6369361	749	798	253	0.9761904761904762	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	78	1	783	2	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6369642-6370966	Cluster_3054	Pocillopora_meandrina_HIv1___Sc0000009	6369642	6370966	1325	1548	696	0.9205426356589147	+	UCUGUACAGGAAUUAUACGAAUAAUGGC	35	9	1431	10	10	19	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6435613-6436040	Cluster_3055	Pocillopora_meandrina_HIv1___Sc0000009	6435613	6436040	428	109	14	0.9724770642201835	+	UACCAAGGUCUUGUAGUCUAGUACAACU	70	0	109	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6437275-6437950	Cluster_3056	Pocillopora_meandrina_HIv1___Sc0000009	6437275	6437950	676	1096	392	0.2755474452554745	.	ACGACACCAACGAACAAGACAUCAUCUGUGG	82	15	962	13	12	20	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6543007-6543435	Cluster_3057	Pocillopora_meandrina_HIv1___Sc0000009	6543007	6543435	429	492	40	0.0	-	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	351	0	487	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6598009-6598600	Cluster_3058	Pocillopora_meandrina_HIv1___Sc0000009	6598009	6598600	592	3118	368	0.9935856318152662	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	515	8	3025	0	1	64	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6767031-6767454	Cluster_3059	Pocillopora_meandrina_HIv1___Sc0000009	6767031	6767454	424	92	38	0.010869565217391304	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	16	0	86	5	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6907816-6908244	Cluster_3060	Pocillopora_meandrina_HIv1___Sc0000009	6907816	6908244	429	554	46	0.0	-	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	403	0	549	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7022715-7023169	Cluster_3061	Pocillopora_meandrina_HIv1___Sc0000009	7022715	7023169	455	517	142	0.9806576402321083	+	GUAAACCAGGGGUCGAGAGU	97	342	100	29	29	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7089518-7089940	Cluster_3062	Pocillopora_meandrina_HIv1___Sc0000009	7089518	7089940	423	136	40	0.3897058823529412	.	GUUGUUACAACUGAGGCCGAGGU	33	7	48	2	5	46	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7142340-7143043	Cluster_3063	Pocillopora_meandrina_HIv1___Sc0000009	7142340	7143043	704	271	134	0.948339483394834	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	23	1	260	2	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7144270-7144702	Cluster_3064	Pocillopora_meandrina_HIv1___Sc0000009	7144270	7144702	433	295	153	0.847457627118644	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	27	1	277	0	3	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7160758-7161573	Cluster_3065	Pocillopora_meandrina_HIv1___Sc0000009	7160758	7161573	816	434	128	1.0	+	GAAGACAAAAGAGGUUGGAACACGUUACA	54	27	383	4	10	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7178014-7178443	Cluster_3066	Pocillopora_meandrina_HIv1___Sc0000009	7178014	7178443	430	191	49	0.0	-	UCACUCGUAAGUGGUCGCUCGUAAAUACGU	65	3	183	1	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7206122-7206537	Cluster_3067	Pocillopora_meandrina_HIv1___Sc0000009	7206122	7206537	416	157	92	0.31210191082802546	.	CGCGUGAUUACUUUGACUUC	11	91	3	44	11	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7233774-7234185	Cluster_3068	Pocillopora_meandrina_HIv1___Sc0000009	7233774	7234185	412	176	93	0.4318181818181818	.	UGAAACCCUUGAUCUUCCAGAACGGCUUGA	17	1	149	9	4	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7236606-7237027	Cluster_3069	Pocillopora_meandrina_HIv1___Sc0000009	7236606	7237027	422	160	80	0.5	.	CUUUGAAGAAGACUGCGCAAGAUAACGAGC	22	3	141	2	3	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7249231-7249657	Cluster_3070	Pocillopora_meandrina_HIv1___Sc0000009	7249231	7249657	427	263	63	1.0	+	UCUGGAAGCGUUAUCUGCUGGUCUGCC	83	4	238	1	2	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7263451-7263879	Cluster_3071	Pocillopora_meandrina_HIv1___Sc0000009	7263451	7263879	429	438	48	0.997716894977169	+	GAAGACAACAGAGGAUGGAACACAUUACA	196	18	408	4	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7278506-7278932	Cluster_3072	Pocillopora_meandrina_HIv1___Sc0000009	7278506	7278932	427	261	49	1.0	+	UCUGGAAGCGUUAUCUGCUGGUCUGCC	77	3	243	1	0	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7288102-7288531	Cluster_3073	Pocillopora_meandrina_HIv1___Sc0000009	7288102	7288531	430	358	59	1.0	+	CGGACAUUGAGUCAAAAACAGCUGAUGGU	69	4	348	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7291674-7292101	Cluster_3074	Pocillopora_meandrina_HIv1___Sc0000009	7291674	7292101	428	123	22	0.0	-	GAUGGAAUGUGCUGCACAGGAUAGUGAUU	63	18	92	1	9	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7302743-7303173	Cluster_3075	Pocillopora_meandrina_HIv1___Sc0000009	7302743	7303173	431	218	49	1.0	+	UGGAUUAUCAACGUUUAACAGGGAACUUGUU	29	5	208	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7306880-7307308	Cluster_3076	Pocillopora_meandrina_HIv1___Sc0000009	7306880	7307308	429	184	49	0.5434782608695652	.	AACACACGGAAGAAUCAGU	43	52	120	2	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7320316-7320738	Cluster_3077	Pocillopora_meandrina_HIv1___Sc0000009	7320316	7320738	423	336	245	1.0	+	UGUGUUGUUCUUUGGGGC	6	62	147	27	30	28	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7432988-7433530	Cluster_3078	Pocillopora_meandrina_HIv1___Sc0000009	7432988	7433530	543	961	223	0.16441207075962538	-	AACGCUUGUAAAGAAGAGGCUGAGGUG	126	12	880	6	6	13	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7461286-7461711	Cluster_3079	Pocillopora_meandrina_HIv1___Sc0000009	7461286	7461711	426	182	69	0.06593406593406594	-	AAGGAGAAUAUCCUUCGUGGGCCUGUUCC	25	5	150	2	3	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7540988-7541419	Cluster_3080	Pocillopora_meandrina_HIv1___Sc0000009	7540988	7541419	432	1281	186	0.9398907103825137	+	AUGUAGAGUGUCUUUAAGGUCAAUA	225	17	906	4	12	116	226	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7541597-7542025	Cluster_3081	Pocillopora_meandrina_HIv1___Sc0000009	7541597	7542025	429	181	39	0.861878453038674	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	46	0	174	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7547952-7548381	Cluster_3082	Pocillopora_meandrina_HIv1___Sc0000009	7547952	7548381	430	525	66	0.9809523809523809	+	UAUAGAGUGGAUGCAUUCUGAUCUUUAC	296	2	518	2	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7553820-7554722	Cluster_3083	Pocillopora_meandrina_HIv1___Sc0000009	7553820	7554722	903	1114	380	0.9685816876122083	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	167	8	1058	3	5	25	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7554812-7556026	Cluster_3084	Pocillopora_meandrina_HIv1___Sc0000009	7554812	7556026	1215	865	374	0.9341040462427745	+	UCCACGUCGUCUUUGGGGUUAAAAUACUU	115	7	800	6	4	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7556515-7556950	Cluster_3085	Pocillopora_meandrina_HIv1___Sc0000009	7556515	7556950	436	212	82	0.9198113207547169	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	31	1	194	0	0	14	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7558210-7558619	Cluster_3086	Pocillopora_meandrina_HIv1___Sc0000009	7558210	7558619	410	99	57	0.8787878787878788	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	19	5	89	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7559916-7561576	Cluster_3087	Pocillopora_meandrina_HIv1___Sc0000009	7559916	7561576	1661	2824	706	0.9302407932011332	+	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	216	58	2572	25	11	35	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7893231-7893732	Cluster_3088	Pocillopora_meandrina_HIv1___Sc0000009	7893231	7893732	502	313	123	0.07987220447284345	-	ACACAAUCAAACAACUGGGGGAAAUAGU	21	7	239	9	4	10	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7900058-7900666	Cluster_3089	Pocillopora_meandrina_HIv1___Sc0000009	7900058	7900666	609	408	175	0.9191176470588235	+	UUCGAAUUGUUUGUGAUCCCACACUUCA	32	14	353	2	2	6	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7951082-7951491	Cluster_3090	Pocillopora_meandrina_HIv1___Sc0000009	7951082	7951491	410	134	56	0.3208955223880597	.	UGUAAUACAUGAUAAAAGAACUCCUU	23	0	130	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7954268-7955172	Cluster_3091	Pocillopora_meandrina_HIv1___Sc0000009	7954268	7955172	905	3433	314	0.009612583745994756	-	UCUGGAUUAUAGUCAAGCUCUGUCAUGG	1137	1	3363	5	9	26	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7955219-7955636	Cluster_3092	Pocillopora_meandrina_HIv1___Sc0000009	7955219	7955636	418	82	41	0.024390243902439025	-	UGUAACUCAACUAUUUUAAUUUCUGACUGU	7	1	79	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8094772-8095805	Cluster_3093	Pocillopora_meandrina_HIv1___Sc0000009	8094772	8095805	1034	16225	592	0.9964252696456086	+	UUGGAACGUGUUGCUGAACGCUUGUUGU	5986	298	15698	8	22	155	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8095873-8096303	Cluster_3094	Pocillopora_meandrina_HIv1___Sc0000009	8095873	8096303	431	190	86	0.6894736842105263	.	GUGGAAUUAAAAGAAGGGACAAUUAACAGU	33	9	171	5	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8101210-8101638	Cluster_3095	Pocillopora_meandrina_HIv1___Sc0000009	8101210	8101638	429	401	70	0.9451371571072319	+	AGUGUGAUCAUUGUCAAAAGACUUUUGCA	165	0	379	0	0	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8101892-8102322	Cluster_3096	Pocillopora_meandrina_HIv1___Sc0000009	8101892	8102322	431	1851	243	0.9740680713128039	+	UGUGUUAGACUUUAACAGGAAAGAAUG	650	2	1793	24	6	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8102656-8103068	Cluster_3097	Pocillopora_meandrina_HIv1___Sc0000009	8102656	8103068	413	100	37	0.76	.	UGUUACAAAACCAUUAGAACUAUCAGUU	25	0	85	0	3	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8104117-8105817	Cluster_3098	Pocillopora_meandrina_HIv1___Sc0000009	8104117	8105817	1701	4011	1035	0.7392171528297182	.	UUAUAUCUUCGGUCAAAAAGUGCACUUU	372	54	3592	31	21	135	178	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8109946-8110374	Cluster_3099	Pocillopora_meandrina_HIv1___Sc0000009	8109946	8110374	429	1004	127	0.9920318725099602	+	AUGUAGAGUGUCUUUAAGGUCAAUA	184	28	741	2	10	91	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8110551-8110979	Cluster_3100	Pocillopora_meandrina_HIv1___Sc0000009	8110551	8110979	429	160	34	0.9	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	47	0	156	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8140529-8140952	Cluster_3101	Pocillopora_meandrina_HIv1___Sc0000009	8140529	8140952	424	129	39	0.27906976744186046	.	UCCAUGAUUUGAGGACUUUCCACUA	18	0	104	0	0	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8147702-8148216	Cluster_3102	Pocillopora_meandrina_HIv1___Sc0000009	8147702	8148216	515	800	134	0.2825	.	GUGUGAAACAUGUGGCCUCAGGCAGAAAGU	163	8	644	1	1	65	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8241861-8242270	Cluster_3103	Pocillopora_meandrina_HIv1___Sc0000009	8241861	8242270	410	190	109	0.4263157894736842	.	ACUGGAUACAAAACUGCUCGAUGC	27	0	135	1	2	11	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8242348-8243092	Cluster_3104	Pocillopora_meandrina_HIv1___Sc0000009	8242348	8243092	745	344	158	0.03197674418604651	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	65	1	336	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8299388-8300172	Cluster_3105	Pocillopora_meandrina_HIv1___Sc0000009	8299388	8300172	785	641	296	0.17160686427457097	-	UAUGACGUUCCAGAAUCUUUGACAAAA	44	3	608	6	3	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8300695-8301124	Cluster_3106	Pocillopora_meandrina_HIv1___Sc0000009	8300695	8301124	430	146	60	0.0273972602739726	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	17	1	145	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8380658-8381106	Cluster_3107	Pocillopora_meandrina_HIv1___Sc0000009	8380658	8381106	449	999	51	0.0890890890890891	-	UGCUUCAUUUCCCUGACUGUAGUCAGC	757	0	980	0	0	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9614509-9614937	Cluster_3108	Pocillopora_meandrina_HIv1___Sc0000009	9614509	9614937	429	157	39	0.1337579617834395	-	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	43	0	153	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9615120-9615547	Cluster_3109	Pocillopora_meandrina_HIv1___Sc0000009	9615120	9615547	428	228	70	0.14473684210526316	-	AGAAUGUAGAGUGUCUUUAAGGUCAAUA	30	7	182	1	4	9	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9616179-9616906	Cluster_3110	Pocillopora_meandrina_HIv1___Sc0000009	9616179	9616906	728	369	148	0.7452574525745257	.	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	37	1	319	1	3	6	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9749118-9750247	Cluster_3111	Pocillopora_meandrina_HIv1___Sc0000009	9749118	9750247	1130	1153	397	0.15611448395490027	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	99	9	1092	3	6	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9750647-9751073	Cluster_3112	Pocillopora_meandrina_HIv1___Sc0000009	9750647	9751073	427	108	45	0.046296296296296294	-	UACGUGUAGACUGAGCCAUUGCCUAGU	29	4	90	1	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9754480-9754902	Cluster_3113	Pocillopora_meandrina_HIv1___Sc0000009	9754480	9754902	423	153	69	0.09803921568627451	-	UAACACAAUGAACCAAGGCACGUCCAGA	15	0	135	0	0	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9992975-9993394	Cluster_3114	Pocillopora_meandrina_HIv1___Sc0000009	9992975	9993394	420	117	51	0.9658119658119658	+	UAUGUCACUUUUGUCGAAUGGUAAAUCGG	20	5	106	0	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10299098-10299522	Cluster_3115	Pocillopora_meandrina_HIv1___Sc0000009	10299098	10299522	425	262	62	0.06870229007633588	-	AUGGACAGAACACAGGAAGUGCU	55	6	99	5	11	107	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10301166-10301592	Cluster_3116	Pocillopora_meandrina_HIv1___Sc0000009	10301166	10301592	427	125	45	1.0	+	UGGGAUUGCUUACUCCUGGUGUUGGUAUA	18	1	119	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10335940-10336465	Cluster_3117	Pocillopora_meandrina_HIv1___Sc0000009	10335940	10336465	526	21536	1286	0.001114413075780089	-	UGGGAAUACCCCGUGUUGUAGGCUU	1721	4343	8676	855	1786	3385	2491	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10336550-10336970	Cluster_3118	Pocillopora_meandrina_HIv1___Sc0000009	10336550	10336970	421	90	25	0.9777777777777777	+	AUCGCUUCUCGGCCUUUUGGC	43	17	2	61	9	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10340567-10341094	Cluster_3119	Pocillopora_meandrina_HIv1___Sc0000009	10340567	10341094	528	5253	801	0.9996192651818009	+	GUUGCCUCGGUAUAGCACUACCU	435	1814	1448	314	306	1018	353	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10344529-10344967	Cluster_3120	Pocillopora_meandrina_HIv1___Sc0000009	10344529	10344967	439	425	159	0.9905882352941177	+	UGUGAUCAAGGAGGCAGUCCU	42	124	77	103	51	45	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10363328-10363752	Cluster_3121	Pocillopora_meandrina_HIv1___Sc0000009	10363328	10363752	425	294	60	0.07142857142857142	-	AUGGACAGAACACAGGAAGUGCU	63	4	100	2	8	133	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10446213-10446957	Cluster_3122	Pocillopora_meandrina_HIv1___Sc0000009	10446213	10446957	745	580	229	0.9362068965517242	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	51	4	565	0	2	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10447035-10447645	Cluster_3123	Pocillopora_meandrina_HIv1___Sc0000009	10447035	10447645	611	463	205	0.4427645788336933	.	CGCAUCUUUAUCCAUCACUCAAAGCGGACU	61	8	384	8	8	13	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10447668-10448073	Cluster_3124	Pocillopora_meandrina_HIv1___Sc0000009	10447668	10448073	406	124	84	0.9193548387096774	+	UGAUUGCAGAGGCUUGCGUAUACUGAUA	7	5	106	1	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10480018-10480514	Cluster_3125	Pocillopora_meandrina_HIv1___Sc0000009	10480018	10480514	497	384	155	0.9791666666666666	+	UGAGAAUCUGUUUGGGUCAAUGAUCACAUU	102	2	371	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10482167-10483472	Cluster_3126	Pocillopora_meandrina_HIv1___Sc0000009	10482167	10483472	1306	849	470	0.9799764428739693	+	UGCACUCGGAUCUCUACCCAUUCUAUGAGU	17	16	807	0	4	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10484435-10484992	Cluster_3127	Pocillopora_meandrina_HIv1___Sc0000009	10484435	10484992	558	541	188	0.9648798521256932	+	AUCCGGCUCGAAGGACCA	103	154	364	0	3	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10656954-10657383	Cluster_3128	Pocillopora_meandrina_HIv1___Sc0000009	10656954	10657383	430	377	55	0.002652519893899204	-	AUUGUUUGGAUGUGUCUGCAAAUGCAGUGC	100	1	371	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10657566-10657989	Cluster_3129	Pocillopora_meandrina_HIv1___Sc0000009	10657566	10657989	424	124	38	0.18548387096774194	-	AUGUAGAGUGUCUUUAAGGUCAAC	50	2	38	1	1	15	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10658624-10659053	Cluster_3130	Pocillopora_meandrina_HIv1___Sc0000009	10658624	10659053	430	756	47	0.9748677248677249	+	AAAGGAAUGACAAACAUCUGCCCCAAAGGU	388	3	748	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10749849-10750278	Cluster_3131	Pocillopora_meandrina_HIv1___Sc0000009	10749849	10750278	430	156	49	0.19230769230769232	-	UUUUCCAUUUCGUCUUUCAGAAAGCUGAU	20	1	143	1	2	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10752545-10752967	Cluster_3132	Pocillopora_meandrina_HIv1___Sc0000009	10752545	10752967	423	192	112	0.0	-	UUCUAUACCAUCGCCGAAAUGUCUGGACU	15	1	182	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10997752-10999000	Cluster_3133	Pocillopora_meandrina_HIv1___Sc0000009	10997752	10999000	1249	1391	387	0.9554277498202732	+	UAAGAUUUACACACUGAUCGACCAUGU	450	7	1336	3	4	15	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10999035-10999801	Cluster_3134	Pocillopora_meandrina_HIv1___Sc0000009	10999035	10999801	767	462	220	0.9285714285714286	+	UCCAAUCACACACAGUUCUCCUGCGGC	69	1	442	2	4	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10999818-11000312	Cluster_3135	Pocillopora_meandrina_HIv1___Sc0000009	10999818	11000312	495	803	253	0.9290161892901619	+	UCGGUCUGGGAGUACUUGCGCUCACAC	59	4	762	2	4	7	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11001182-11002453	Cluster_3136	Pocillopora_meandrina_HIv1___Sc0000009	11001182	11002453	1272	1316	518	0.918693009118541	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	86	16	1256	6	5	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11074194-11074663	Cluster_3137	Pocillopora_meandrina_HIv1___Sc0000009	11074194	11074663	470	578	153	0.9965397923875432	+	UUUUUUGAUUUGGCAAAGCUUGAAAUUUCC	180	7	562	3	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11075604-11076016	Cluster_3138	Pocillopora_meandrina_HIv1___Sc0000009	11075604	11076016	413	85	40	1.0	+	UGGAUAAAAACGACUGGGAUAAGAUAUAUGC	16	1	80	0	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11092081-11092708	Cluster_3139	Pocillopora_meandrina_HIv1___Sc0000009	11092081	11092708	628	248	84	0.0	-	UAUUAGUUUUUCCGCUCUUUUGAAGUCU	29	1	244	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11100878-11101287	Cluster_3140	Pocillopora_meandrina_HIv1___Sc0000009	11100878	11101287	410	178	97	0.3651685393258427	.	ACUGGAUACAAAACUGCUCGAUGC	23	3	130	1	0	7	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11101365-11102109	Cluster_3141	Pocillopora_meandrina_HIv1___Sc0000009	11101365	11102109	745	342	154	0.05555555555555555	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	57	1	331	0	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11246400-11247804	Cluster_3142	Pocillopora_meandrina_HIv1___Sc0000009	11246400	11247804	1405	1490	633	0.0953020134228188	-	UCCGUGACACAACGACUUUGCCUUGCUU	114	16	1419	5	10	9	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11248328-11248756	Cluster_3143	Pocillopora_meandrina_HIv1___Sc0000009	11248328	11248756	429	133	56	0.03007518796992481	-	AAACGAUUGAAUAGCAUAACUGAUGAACUA	18	1	128	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11353108-11354065	Cluster_3144	Pocillopora_meandrina_HIv1___Sc0000009	11353108	11354065	958	2956	302	0.9874830852503383	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	597	12	2925	0	2	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11391213-11391967	Cluster_3145	Pocillopora_meandrina_HIv1___Sc0000009	11391213	11391967	755	439	240	0.025056947608200455	-	UGGUUUACAGCGUGCUUUGAAGGUUUUAA	19	4	416	1	6	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11392410-11392838	Cluster_3146	Pocillopora_meandrina_HIv1___Sc0000009	11392410	11392838	429	149	54	0.006711409395973154	-	UGCUCAUAUCUAAUAGGACAACUGCCGUU	53	2	142	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11533128-11533597	Cluster_3147	Pocillopora_meandrina_HIv1___Sc0000009	11533128	11533597	470	549	137	0.9927140255009107	+	UUUUUUGAUUUGGCAAAGCUUGAAAUUUCC	193	10	529	3	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11534538-11534954	Cluster_3148	Pocillopora_meandrina_HIv1___Sc0000009	11534538	11534954	417	113	56	0.9911504424778761	+	UGGAUAAAAACGACUGGGAUAAGAUAUAUGC	14	0	105	0	3	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11551003-11551630	Cluster_3149	Pocillopora_meandrina_HIv1___Sc0000009	11551003	11551630	628	239	94	0.0	-	UAUUAGUUUUUCCGCUCUUUUGAAGUCU	33	0	238	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11649052-11649873	Cluster_3150	Pocillopora_meandrina_HIv1___Sc0000009	11649052	11649873	822	1010	310	0.1900990099009901	-	UGACUUCGUGCCAUCUCUUGUGAUUAUU	125	15	915	4	7	12	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11656065-11657100	Cluster_3151	Pocillopora_meandrina_HIv1___Sc0000009	11656065	11657100	1036	423	125	0.18912529550827423	-	AUGUAGAGUGUCUUUAAGGUCAAC	47	12	320	4	1	19	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11767760-11768545	Cluster_3152	Pocillopora_meandrina_HIv1___Sc0000009	11767760	11768545	786	612	205	0.5816993464052288	.	UGUUAUAUCUGCAUCGGAUGUUAAAGUGC	51	12	563	6	6	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11778166-11778591	Cluster_3153	Pocillopora_meandrina_HIv1___Sc0000009	11778166	11778591	426	179	34	0.0	-	UCCGAUUUAAAAGAUUCUUUGUUUGU	121	1	176	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11778872-11779300	Cluster_3154	Pocillopora_meandrina_HIv1___Sc0000009	11778872	11779300	429	225	57	0.04888888888888889	-	UUUGAUCUUGAAAUUAUGAUACCUGGAA	63	0	222	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11791398-11791862	Cluster_3155	Pocillopora_meandrina_HIv1___Sc0000009	11791398	11791862	465	499	179	0.04609218436873747	-	UGAUGCUGUCGCGUGUACUGCCGAAAAGA	43	1	474	3	0	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11792402-11792830	Cluster_3156	Pocillopora_meandrina_HIv1___Sc0000009	11792402	11792830	429	155	37	0.0064516129032258064	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	73	0	153	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11909906-11910334	Cluster_3157	Pocillopora_meandrina_HIv1___Sc0000009	11909906	11910334	429	155	57	0.9935483870967742	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	47	1	152	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11910487-11911021	Cluster_3158	Pocillopora_meandrina_HIv1___Sc0000009	11910487	11911021	535	728	263	0.9972527472527473	+	UAAAUUCGUCUGCAACAGCUUUGUCGC	43	4	711	1	7	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11935729-11936155	Cluster_3159	Pocillopora_meandrina_HIv1___Sc0000009	11935729	11936155	427	442	156	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	32	97	175	26	33	62	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11936367-11936770	Cluster_3160	Pocillopora_meandrina_HIv1___Sc0000009	11936367	11936770	404	162	108	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	45	79	11	11	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11937947-11938372	Cluster_3161	Pocillopora_meandrina_HIv1___Sc0000009	11937947	11938372	426	429	164	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	34	110	189	16	26	46	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11938579-11938989	Cluster_3162	Pocillopora_meandrina_HIv1___Sc0000009	11938579	11938989	411	195	124	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	7	54	88	6	20	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11940165-11940591	Cluster_3163	Pocillopora_meandrina_HIv1___Sc0000009	11940165	11940591	427	409	137	0.004889975550122249	-	UGGGAAUACCCCGUGUUGUAGGCUU	37	87	178	18	24	61	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11940797-11941233	Cluster_3164	Pocillopora_meandrina_HIv1___Sc0000009	11940797	11941233	437	225	130	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	41	120	9	15	23	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11942383-11942808	Cluster_3165	Pocillopora_meandrina_HIv1___Sc0000009	11942383	11942808	426	383	143	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	36	94	145	14	21	60	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11943006-11943425	Cluster_3166	Pocillopora_meandrina_HIv1___Sc0000009	11943006	11943425	420	229	127	0.9956331877729258	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	20	55	101	13	24	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11944601-11945026	Cluster_3167	Pocillopora_meandrina_HIv1___Sc0000009	11944601	11945026	426	411	169	0.0024330900243309003	-	GGAAUACCCCGUGUUGUAGGCUU	24	101	158	15	40	53	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11945233-11945643	Cluster_3168	Pocillopora_meandrina_HIv1___Sc0000009	11945233	11945643	411	215	129	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	53	94	10	17	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11946819-11947244	Cluster_3169	Pocillopora_meandrina_HIv1___Sc0000009	11946819	11947244	426	388	137	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	37	88	163	19	20	57	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11947451-11947861	Cluster_3170	Pocillopora_meandrina_HIv1___Sc0000009	11947451	11947861	411	228	135	0.9956140350877193	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	62	97	12	19	22	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11949037-11949463	Cluster_3171	Pocillopora_meandrina_HIv1___Sc0000009	11949037	11949463	427	415	164	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	30	89	192	15	21	63	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11949669-11950106	Cluster_3172	Pocillopora_meandrina_HIv1___Sc0000009	11949669	11950106	438	230	148	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	53	108	19	16	21	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11951255-11951680	Cluster_3173	Pocillopora_meandrina_HIv1___Sc0000009	11951255	11951680	426	432	164	0.0023148148148148147	-	UGGGAAUACCCCGUGUUGUAGGCUU	29	115	189	14	24	59	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11951887-11952297	Cluster_3174	Pocillopora_meandrina_HIv1___Sc0000009	11951887	11952297	411	207	120	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	38	99	11	15	29	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11953473-11953899	Cluster_3175	Pocillopora_meandrina_HIv1___Sc0000009	11953473	11953899	427	383	147	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	32	84	165	13	34	55	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11954105-11954515	Cluster_3176	Pocillopora_meandrina_HIv1___Sc0000009	11954105	11954515	411	219	127	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	49	101	7	23	24	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11955691-11956116	Cluster_3177	Pocillopora_meandrina_HIv1___Sc0000009	11955691	11956116	426	394	153	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	29	92	172	18	18	60	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11956323-11956733	Cluster_3178	Pocillopora_meandrina_HIv1___Sc0000009	11956323	11956733	411	224	147	0.9955357142857143	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	64	104	9	13	21	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11957909-11958333	Cluster_3179	Pocillopora_meandrina_HIv1___Sc0000009	11957909	11958333	425	206	102	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	15	50	93	7	12	25	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11958541-11958951	Cluster_3180	Pocillopora_meandrina_HIv1___Sc0000009	11958541	11958951	411	219	143	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	9	47	105	15	12	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11961266-11961691	Cluster_3181	Pocillopora_meandrina_HIv1___Sc0000009	11961266	11961691	426	246	132	0.9959349593495935	+	UUACCUGACGCGGGAGGUACUGUGAUC	14	108	59	23	18	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11962448-11962874	Cluster_3182	Pocillopora_meandrina_HIv1___Sc0000009	11962448	11962874	427	438	171	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	34	93	202	12	30	58	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11963071-11963490	Cluster_3183	Pocillopora_meandrina_HIv1___Sc0000009	11963071	11963490	420	177	118	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	38	92	6	10	13	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11964666-11965092	Cluster_3184	Pocillopora_meandrina_HIv1___Sc0000009	11964666	11965092	427	458	165	0.002183406113537118	-	GGAAUACCCCGUGUUGUAGGCUU	29	117	190	9	29	63	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11965300-11965707	Cluster_3185	Pocillopora_meandrina_HIv1___Sc0000009	11965300	11965707	408	209	130	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	55	89	14	21	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11966884-11967309	Cluster_3186	Pocillopora_meandrina_HIv1___Sc0000009	11966884	11967309	426	457	154	0.002188183807439825	-	UGGGAAUACCCCGUGUUGUAGGCUU	32	115	190	20	35	61	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11967516-11967958	Cluster_3187	Pocillopora_meandrina_HIv1___Sc0000009	11967516	11967958	443	217	125	0.9953917050691244	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	61	97	16	13	15	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11969102-11969527	Cluster_3188	Pocillopora_meandrina_HIv1___Sc0000009	11969102	11969527	426	327	136	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	24	81	145	12	25	35	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11969734-11970144	Cluster_3189	Pocillopora_meandrina_HIv1___Sc0000009	11969734	11970144	411	221	140	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	9	51	111	17	16	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11971320-11971745	Cluster_3190	Pocillopora_meandrina_HIv1___Sc0000009	11971320	11971745	426	287	121	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	25	49	117	23	18	47	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11971952-11972390	Cluster_3191	Pocillopora_meandrina_HIv1___Sc0000009	11971952	11972390	439	237	141	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	61	100	17	13	24	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11973539-11973963	Cluster_3192	Pocillopora_meandrina_HIv1___Sc0000009	11973539	11973963	425	186	94	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	11	44	72	11	9	23	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11974176-11974577	Cluster_3193	Pocillopora_meandrina_HIv1___Sc0000009	11974176	11974577	402	154	105	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	30	80	8	9	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11975753-11976178	Cluster_3194	Pocillopora_meandrina_HIv1___Sc0000009	11975753	11976178	426	270	114	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	21	51	124	12	23	40	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11976388-11976947	Cluster_3195	Pocillopora_meandrina_HIv1___Sc0000009	11976388	11976947	560	4942	552	0.9995953055443141	+	CUACCUCCGAGUGCGGCCCACU	460	2053	559	619	1097	556	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11977971-11978476	Cluster_3196	Pocillopora_meandrina_HIv1___Sc0000009	11977971	11978476	506	5724	583	0.0006988120195667365	-	GGAAUACCCCGUGUUGUAGGCUU	475	1131	2162	289	472	1031	639	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11978605-11979161	Cluster_3197	Pocillopora_meandrina_HIv1___Sc0000009	11978605	11979161	557	2297	588	0.9978232477144101	+	GUUGCCUCGGUAUAGCACUACCUCCG	220	640	932	113	136	360	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11980191-11980611	Cluster_3198	Pocillopora_meandrina_HIv1___Sc0000009	11980191	11980611	421	98	59	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	8	20	43	3	8	13	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11980819-11981229	Cluster_3199	Pocillopora_meandrina_HIv1___Sc0000009	11980819	11981229	411	152	88	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	32	87	6	12	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11982404-11982828	Cluster_3200	Pocillopora_meandrina_HIv1___Sc0000009	11982404	11982828	425	248	112	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	18	58	104	12	15	35	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:21012-21425	Cluster_3201	Pocillopora_meandrina_HIv1___Sc0000010	21012	21425	414	168	131	0.8214285714285714	+	UUGCCGUGCGUCUGUUCAG	6	62	28	24	26	20	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:140324-140751	Cluster_3202	Pocillopora_meandrina_HIv1___Sc0000010	140324	140751	428	175	77	0.9314285714285714	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	65	1	169	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:142783-143192	Cluster_3203	Pocillopora_meandrina_HIv1___Sc0000010	142783	143192	410	323	180	0.7306501547987616	.	CGCGGUUACAAAGAAGAUGACAGA	19	1	260	4	4	12	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:144003-144428	Cluster_3204	Pocillopora_meandrina_HIv1___Sc0000010	144003	144428	426	233	105	0.7854077253218884	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	24	6	211	1	5	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:177177-177603	Cluster_3205	Pocillopora_meandrina_HIv1___Sc0000010	177177	177603	427	247	52	0.9919028340080972	+	UGUUAAUCGAGAGAAGCAUAGACGCAA	66	0	244	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:413541-414064	Cluster_3206	Pocillopora_meandrina_HIv1___Sc0000010	413541	414064	524	666	196	0.042042042042042045	-	UAAUGGGAAAACGAGAACAGCGUGAGUGU	45	1	564	2	4	24	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:414143-414606	Cluster_3207	Pocillopora_meandrina_HIv1___Sc0000010	414143	414606	464	734	113	0.03814713896457766	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	183	108	583	3	3	31	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:414708-415135	Cluster_3208	Pocillopora_meandrina_HIv1___Sc0000010	414708	415135	428	126	49	0.05555555555555555	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	32	3	115	1	2	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:683671-684477	Cluster_3209	Pocillopora_meandrina_HIv1___Sc0000010	683671	684477	807	390	172	1.0	+	UGAUCUUGCAGAGCACAAUCAGAUUCUGAU	40	3	372	1	2	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:685197-685956	Cluster_3210	Pocillopora_meandrina_HIv1___Sc0000010	685197	685956	760	4128	660	0.999031007751938	+	UCAUGAUCACUUAGAGGGUUUGCACUCAUA	469	41	4006	18	33	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:685970-687014	Cluster_3211	Pocillopora_meandrina_HIv1___Sc0000010	685970	687014	1045	2040	328	0.9995098039215686	+	UAUGCAUCGACUUUCACACAGCACUUAGAUU	339	14	1975	9	0	6	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:687962-688391	Cluster_3212	Pocillopora_meandrina_HIv1___Sc0000010	687962	688391	430	407	189	0.9975429975429976	+	UUUUCUUGUAAUUGACUGUCUAGUUUGCCU	26	3	389	2	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:689527-689957	Cluster_3213	Pocillopora_meandrina_HIv1___Sc0000010	689527	689957	431	495	82	1.0	+	UGAAAGGAGAUUUAGUAGACUGAAGGAAUA	95	1	472	2	6	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:690399-690828	Cluster_3214	Pocillopora_meandrina_HIv1___Sc0000010	690399	690828	430	249	65	1.0	+	UACAUGUGUACUGGUAGAGAAAACCCUCC	62	2	244	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:691758-692160	Cluster_3215	Pocillopora_meandrina_HIv1___Sc0000010	691758	692160	403	147	63	1.0	+	UGUUCUAGUCAUUGAAACCUGCAUUUGUU	17	0	144	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:693529-693951	Cluster_3216	Pocillopora_meandrina_HIv1___Sc0000010	693529	693951	423	208	76	0.9855769230769231	+	UGUGUCACGUUCUCAUCUGAAAC	38	1	169	0	0	38	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:697762-698180	Cluster_3217	Pocillopora_meandrina_HIv1___Sc0000010	697762	698180	419	133	61	0.05263157894736842	-	UCUUCCGGUCUGUUUUCGCUUUUUCUGGA	21	5	121	0	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:713480-713909	Cluster_3218	Pocillopora_meandrina_HIv1___Sc0000010	713480	713909	430	218	80	0.9908256880733946	+	UGCUUCAUUUUGAGCUUCUCUGAUCAUAUC	78	1	212	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:750689-751101	Cluster_3219	Pocillopora_meandrina_HIv1___Sc0000010	750689	751101	413	118	68	1.0	+	UGACGUGAAAGUUUCUGGACUUGUUUC	11	1	115	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:751294-751859	Cluster_3220	Pocillopora_meandrina_HIv1___Sc0000010	751294	751859	566	479	113	0.9979123173277662	+	UAUGACGGUACUUUCAAUGGCUUCAGGC	139	8	445	2	14	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:751993-752738	Cluster_3221	Pocillopora_meandrina_HIv1___Sc0000010	751993	752738	746	1727	287	0.9965257672264042	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	366	83	1626	3	0	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:755612-756456	Cluster_3222	Pocillopora_meandrina_HIv1___Sc0000010	755612	756456	845	1891	337	0.8402961396086727	+	UAAGUACUGUCGGAGUUGAACCUUUACGGC	685	11	1830	8	10	23	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:761703-762647	Cluster_3223	Pocillopora_meandrina_HIv1___Sc0000010	761703	762647	945	816	243	0.9019607843137255	+	UGAUUAGAAUCGGGAACAACCA	193	9	569	4	198	11	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:769669-770096	Cluster_3224	Pocillopora_meandrina_HIv1___Sc0000010	769669	770096	428	185	48	1.0	+	UUGGAUCUGUCACUUUCUCGUGAUGCAC	61	3	179	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:790303-790774	Cluster_3225	Pocillopora_meandrina_HIv1___Sc0000010	790303	790774	472	969	169	0.9587203302373581	+	UAAUCGCAACAGGGAAACUAGACUCCGA	213	7	902	3	7	28	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:794554-795949	Cluster_3226	Pocillopora_meandrina_HIv1___Sc0000010	794554	795949	1396	6292	1450	0.9006675143038779	+	AUCCCACCGCUGCCACCA	261	429	5416	40	30	114	263	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:796195-796604	Cluster_3227	Pocillopora_meandrina_HIv1___Sc0000010	796195	796604	410	158	89	0.6645569620253164	.	UCAAAAAGAUCUUUGUUGGAAAUGACAUU	9	11	107	6	12	17	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:797151-797760	Cluster_3228	Pocillopora_meandrina_HIv1___Sc0000010	797151	797760	610	389	125	0.9974293059125964	+	UCGGUACUCUGUUCAAUAAUAUUUCUC	81	2	379	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:801841-803262	Cluster_3229	Pocillopora_meandrina_HIv1___Sc0000010	801841	803262	1422	8101	1154	0.7655844957412665	.	AGAGAUCUUAGAAAACGAUCGUGUGUGCG	546	81	7811	36	36	43	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:804480-805615	Cluster_3230	Pocillopora_meandrina_HIv1___Sc0000010	804480	805615	1136	8557	1500	0.8942386350356434	+	UGAAAGGUACUUUCCGAAUGUUAGCAGAC	636	531	7420	34	96	281	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:807657-808354	Cluster_3231	Pocillopora_meandrina_HIv1___Sc0000010	807657	808354	698	615	209	0.8097560975609757	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	108	20	562	2	2	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:820776-821202	Cluster_3232	Pocillopora_meandrina_HIv1___Sc0000010	820776	821202	427	165	57	0.8787878787878788	+	UGAGUACGGGCACUUAAGAGUUUGAUG	29	9	146	0	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:838175-838998	Cluster_3233	Pocillopora_meandrina_HIv1___Sc0000010	838175	838998	824	438	117	0.9748858447488584	+	UAGGACAACUGAGAAUCCACGUAGACUC	120	0	426	0	7	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:842931-843354	Cluster_3234	Pocillopora_meandrina_HIv1___Sc0000010	842931	843354	424	217	121	0.511520737327189	.	UCUUUUACCAUAUCUAAAACUCCACAUU	16	3	194	2	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:843490-844196	Cluster_3235	Pocillopora_meandrina_HIv1___Sc0000010	843490	844196	707	489	226	0.7750511247443763	.	UCUUUUGGGUCGUAACUUGAAACAUUCAUA	51	6	447	3	6	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:874558-875361	Cluster_3236	Pocillopora_meandrina_HIv1___Sc0000010	874558	875361	804	16738	501	0.9045286175170272	+	UGCUUCAUUUCCCUGACUGUAGUCAGU	3259	40	14948	45	17	51	1637	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:897691-898120	Cluster_3237	Pocillopora_meandrina_HIv1___Sc0000010	897691	898120	430	1539	125	0.9967511371020142	+	UCUUUCGGUCACGUGGGCUUCAAACGCGU	569	4	1525	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:919498-919932	Cluster_3238	Pocillopora_meandrina_HIv1___Sc0000010	919498	919932	435	823	181	0.9696233292831106	+	UAUGACUUAGCUAAUUCCGAUACAUGA	85	2	790	7	4	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:920394-920916	Cluster_3239	Pocillopora_meandrina_HIv1___Sc0000010	920394	920916	523	535	146	0.8766355140186916	+	UCGAACUAACAAUAACCUCCUGCGAUAAAUU	108	14	478	11	0	9	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:922617-923034	Cluster_3240	Pocillopora_meandrina_HIv1___Sc0000010	922617	923034	418	101	23	0.0891089108910891	-	ACAGAUUGAGAGCUCUUU	67	92	8	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:928260-931411	Cluster_3241	Pocillopora_meandrina_HIv1___Sc0000010	928260	931411	3152	3090	1394	0.9294498381877022	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	108	21	2889	12	15	51	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1155444-1155861	Cluster_3242	Pocillopora_meandrina_HIv1___Sc0000010	1155444	1155861	418	155	16	0.0	-	UGGCAUGCAAAAAAAAAA	43	153	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1170327-1170748	Cluster_3243	Pocillopora_meandrina_HIv1___Sc0000010	1170327	1170748	422	280	120	0.9964285714285714	+	UAUGAAAUACAUCGGUGGACU	30	81	60	68	38	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1222391-1222817	Cluster_3244	Pocillopora_meandrina_HIv1___Sc0000010	1222391	1222817	427	1036	87	0.0	-	GGGGGCAUAGCUCAGUGGUAGAGCAUU	513	27	866	34	37	12	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1306165-1306587	Cluster_3245	Pocillopora_meandrina_HIv1___Sc0000010	1306165	1306587	423	567	89	0.05114638447971781	-	CUCGCCUCUACUUGACCUCAUUA	151	189	3	148	71	156	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1313084-1314286	Cluster_3246	Pocillopora_meandrina_HIv1___Sc0000010	1313084	1314286	1203	2438	360	0.22682526661197702	.	UAGAGAACGUUGCUGACACUGAAUGGUC	548	8	2386	1	12	5	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1335014-1335439	Cluster_3247	Pocillopora_meandrina_HIv1___Sc0000010	1335014	1335439	426	99	37	0.9696969696969697	+	CCUCGAGACUGUAAGGAGAGAGACGU	20	10	78	1	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1837449-1838066	Cluster_3248	Pocillopora_meandrina_HIv1___Sc0000010	1837449	1838066	618	293	137	0.006825938566552901	-	UGCUCAUAUCUAAUAGGACAACUGCCGUU	47	2	283	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1847194-1847623	Cluster_3249	Pocillopora_meandrina_HIv1___Sc0000010	1847194	1847623	430	309	106	0.9385113268608414	+	UGUUUCAACUCUUGAAUGAUUCUUGCUU	34	0	296	1	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2209253-2209659	Cluster_3250	Pocillopora_meandrina_HIv1___Sc0000010	2209253	2209659	407	137	95	0.40145985401459855	.	UGCGUCUGUUCAGUAAUGGA	12	84	15	19	12	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2415327-2415757	Cluster_3251	Pocillopora_meandrina_HIv1___Sc0000010	2415327	2415757	431	243	37	0.9876543209876543	+	AGAGACUCGUCCAAAAUUACUCCUAAGUAUU	75	5	233	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2417991-2418411	Cluster_3252	Pocillopora_meandrina_HIv1___Sc0000010	2417991	2418411	421	144	74	0.9791666666666666	+	UGAUCUUCUGUUUUAUAUUUGAGCCAGC	22	0	139	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2427909-2428328	Cluster_3253	Pocillopora_meandrina_HIv1___Sc0000010	2427909	2428328	420	192	127	0.8645833333333334	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	12	0	176	2	0	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2428422-2428840	Cluster_3254	Pocillopora_meandrina_HIv1___Sc0000010	2428422	2428840	419	276	178	0.9311594202898551	+	UGUACGAGUCAGACACGUGGAUACUUGC	14	0	254	2	1	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2429182-2429617	Cluster_3255	Pocillopora_meandrina_HIv1___Sc0000010	2429182	2429617	436	233	103	0.944206008583691	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	29	2	219	1	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2430352-2430780	Cluster_3256	Pocillopora_meandrina_HIv1___Sc0000010	2430352	2430780	429	174	50	0.7241379310344828	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	30	0	145	0	2	0	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2441809-2442565	Cluster_3257	Pocillopora_meandrina_HIv1___Sc0000010	2441809	2442565	757	1642	286	0.8909866017052375	+	UGUGUCUGUUGUGCAAUUGGGGAGCACU	173	9	1499	5	79	15	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2449123-2450126	Cluster_3258	Pocillopora_meandrina_HIv1___Sc0000010	2449123	2450126	1004	2290	462	0.9344978165938864	+	UGUUUGAUCCAAUUCAGGAUACUUUGGCG	289	14	2173	1	7	41	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2450212-2451571	Cluster_3259	Pocillopora_meandrina_HIv1___Sc0000010	2450212	2451571	1360	2828	650	0.9816124469589816	+	UCCAUGGCUCUUGUGUGCUUGUUGCAUA	397	36	2715	4	13	8	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2455281-2455708	Cluster_3260	Pocillopora_meandrina_HIv1___Sc0000010	2455281	2455708	428	311	107	0.9421221864951769	+	UGCAAGCUUCUCAUUAUUCGGCAGGACU	40	4	293	2	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2455924-2456774	Cluster_3261	Pocillopora_meandrina_HIv1___Sc0000010	2455924	2456774	851	2570	343	0.998443579766537	+	UACUUCCUGUCACUGGACUGAUGAUGCC	654	16	2524	6	6	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2456983-2458012	Cluster_3262	Pocillopora_meandrina_HIv1___Sc0000010	2456983	2458012	1030	2330	420	0.9416309012875537	+	UCAGCAAACUGUUGGAAAUGCAUGCCAUC	649	25	2210	2	37	27	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2461299-2461709	Cluster_3263	Pocillopora_meandrina_HIv1___Sc0000010	2461299	2461709	411	216	120	0.9351851851851852	+	UAGGAAAUGGCGUCCAGUAAGUCUUAGA	16	2	199	3	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2461732-2462161	Cluster_3264	Pocillopora_meandrina_HIv1___Sc0000010	2461732	2462161	430	335	169	0.8507462686567164	+	UAUUCUCAACAGUACUCAAAAAGGUAACACG	27	3	297	3	5	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2462681-2463362	Cluster_3265	Pocillopora_meandrina_HIv1___Sc0000010	2462681	2463362	682	263	141	0.8897338403041825	+	UGACAUGUCGAAACCCGUAAUCUAAAGU	26	0	248	1	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2463754-2464730	Cluster_3266	Pocillopora_meandrina_HIv1___Sc0000010	2463754	2464730	977	1144	261	0.9449300699300699	+	UAACUCCGAUCCGAUGACCUAGAAAGUC	156	2	1098	3	2	6	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2464979-2465572	Cluster_3267	Pocillopora_meandrina_HIv1___Sc0000010	2464979	2465572	594	1019	360	0.7428851815505397	.	UAUAUAUCCUCUGUGAUUGUCUGAUCAC	70	16	851	48	37	24	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2465837-2466347	Cluster_3268	Pocillopora_meandrina_HIv1___Sc0000010	2465837	2466347	511	803	332	0.7671232876712328	.	UCUGAUUGCAUAUACCUGUGAAACUUGU	111	10	716	10	4	27	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2466427-2467881	Cluster_3269	Pocillopora_meandrina_HIv1___Sc0000010	2466427	2467881	1455	5721	1109	0.9521062751267261	+	UAGGAGAUGUGUCUUUCCAGGCUCGAAA	867	33	5414	20	31	43	180	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2469759-2470188	Cluster_3270	Pocillopora_meandrina_HIv1___Sc0000010	2469759	2470188	430	106	20	1.0	+	UGAAAACUGCACUCAACCAAAACUUUGAGC	62	0	105	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2478426-2479157	Cluster_3271	Pocillopora_meandrina_HIv1___Sc0000010	2478426	2479157	732	224	98	0.6294642857142857	.	UACUUGUCUAUCCUGGACCACCGGAACA	38	5	200	0	3	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2479632-2480805	Cluster_3272	Pocillopora_meandrina_HIv1___Sc0000010	2479632	2480805	1174	3713	790	0.9598707244815513	+	UGAAUACUUAAGGGUCGGUCAGGCUGAUA	634	28	3502	30	39	52	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2480915-2481760	Cluster_3273	Pocillopora_meandrina_HIv1___Sc0000010	2480915	2481760	846	8691	785	0.990219767575653	+	UGAGAUAUGUAUUCUUCUUCGAGGCAGA	2942	14	8507	50	11	27	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2482833-2483305	Cluster_3274	Pocillopora_meandrina_HIv1___Sc0000010	2482833	2483305	473	327	142	0.9327217125382263	+	UGAUUUAGAAAUAAGAAAUGAUUCU	19	1	321	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2497239-2498199	Cluster_3275	Pocillopora_meandrina_HIv1___Sc0000010	2497239	2498199	961	3008	610	0.9660904255319149	+	UGAUGAUCGUUGACGGGAGAAAACUCACA	200	27	2890	14	14	26	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2498258-2499149	Cluster_3276	Pocillopora_meandrina_HIv1___Sc0000010	2498258	2499149	892	2853	647	0.9554854539081669	+	UGAACAUGUAGGAAACUGACUUUUGGUC	459	17	2707	10	16	26	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2499159-2501195	Cluster_3277	Pocillopora_meandrina_HIv1___Sc0000010	2499159	2501195	2037	5211	1577	0.8875455766647476	+	UAUUCGUCUAGAGUUUCACCAACCUGU	381	91	4855	39	20	81	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2506868-2507294	Cluster_3278	Pocillopora_meandrina_HIv1___Sc0000010	2506868	2507294	427	158	84	0.9430379746835443	+	UCGGUUAUCAUUACUAUUUGCAUCUUCAUC	29	6	145	2	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2514789-2515216	Cluster_3279	Pocillopora_meandrina_HIv1___Sc0000010	2514789	2515216	428	103	13	0.9902912621359223	+	UAACCCGAGAACUGACACGUGAGUAGUC	68	0	91	0	0	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2519340-2519767	Cluster_3280	Pocillopora_meandrina_HIv1___Sc0000010	2519340	2519767	428	96	11	1.0	+	UAACCCGAGAACUGACACGUGAGUAGUC	60	0	87	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2522763-2523192	Cluster_3281	Pocillopora_meandrina_HIv1___Sc0000010	2522763	2523192	430	179	29	1.0	+	UGACUUGCACAGCUUCUUGAAAUAAACAGG	50	0	170	0	0	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2536734-2537162	Cluster_3282	Pocillopora_meandrina_HIv1___Sc0000010	2536734	2537162	429	128	23	0.9921875	+	UAUUCCAACCGAUCUACUAAUUUUGUGAC	59	0	128	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2537629-2538056	Cluster_3283	Pocillopora_meandrina_HIv1___Sc0000010	2537629	2538056	428	110	23	0.990909090909091	+	AACGUGCUACUGAUUCUGGUGAAGACAUUC	38	1	99	0	10	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2564839-2565268	Cluster_3284	Pocillopora_meandrina_HIv1___Sc0000010	2564839	2565268	430	156	48	0.9935897435897436	+	UGAAUAGCAUAACUGAUGAACUACGUG	24	1	152	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2565790-2566238	Cluster_3285	Pocillopora_meandrina_HIv1___Sc0000010	2565790	2566238	449	477	220	0.8092243186582809	+	UAUGACGUUCCAGAAUCUUUGACAAAA	39	5	444	1	6	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2566408-2567147	Cluster_3286	Pocillopora_meandrina_HIv1___Sc0000010	2566408	2567147	740	894	328	0.9485458612975392	+	UCCGUGACACAACGACUUUGCCUUGCUU	126	7	869	2	4	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2571020-2571648	Cluster_3287	Pocillopora_meandrina_HIv1___Sc0000010	2571020	2571648	629	1883	201	0.9978757302177377	+	UGAUUGGUGCAUUUCGAUCCUUGCUGU	735	4	1869	2	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2602291-2602714	Cluster_3288	Pocillopora_meandrina_HIv1___Sc0000010	2602291	2602714	424	80	13	0.9375	+	AGCAUGACGAAGGUUAGAGAUCGAC	44	1	54	1	0	1	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3002204-3002630	Cluster_3289	Pocillopora_meandrina_HIv1___Sc0000010	3002204	3002630	427	121	47	0.9008264462809917	+	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	27	5	110	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3008210-3008649	Cluster_3290	Pocillopora_meandrina_HIv1___Sc0000010	3008210	3008649	440	842	154	0.040380047505938245	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	199	3	825	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3150263-3150692	Cluster_3291	Pocillopora_meandrina_HIv1___Sc0000010	3150263	3150692	430	278	147	0.1223021582733813	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	32	1	255	2	1	1	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3151922-3152623	Cluster_3292	Pocillopora_meandrina_HIv1___Sc0000010	3151922	3152623	702	238	122	0.058823529411764705	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	28	1	229	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3204118-3204630	Cluster_3293	Pocillopora_meandrina_HIv1___Sc0000010	3204118	3204630	513	188	77	0.015957446808510637	-	CUAGUACAAACAACGAUCGAGUGGCCAUU	27	4	152	9	3	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3204723-3205723	Cluster_3294	Pocillopora_meandrina_HIv1___Sc0000010	3204723	3205723	1001	1693	275	0.14057885410513882	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	233	184	1451	6	5	37	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3263500-3263918	Cluster_3295	Pocillopora_meandrina_HIv1___Sc0000010	3263500	3263918	419	169	103	0.011834319526627219	-	AGAAAGCUCUGAGGAACACU	10	53	52	11	24	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3368202-3369096	Cluster_3296	Pocillopora_meandrina_HIv1___Sc0000010	3368202	3369096	895	555	163	0.17117117117117117	-	UUUCAAACUAAGGAAGGAGAAAGGGAUA	99	11	419	12	5	17	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3369868-3370294	Cluster_3297	Pocillopora_meandrina_HIv1___Sc0000010	3369868	3370294	427	567	70	0.001763668430335097	-	UGAAGAUGGAAUCAAGAAAUGCAAAAC	332	9	492	4	29	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3374263-3374687	Cluster_3298	Pocillopora_meandrina_HIv1___Sc0000010	3374263	3374687	425	176	77	0.017045454545454544	-	GAUUCUGGUAGCGUUUUUAAGUGCGA	17	8	147	1	2	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3388834-3389259	Cluster_3299	Pocillopora_meandrina_HIv1___Sc0000010	3388834	3389259	426	326	161	0.3496932515337423	.	UUAAAAAGACGAGCUCGACA	21	206	0	100	16	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3398303-3399259	Cluster_3300	Pocillopora_meandrina_HIv1___Sc0000010	3398303	3399259	957	600	173	0.075	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	66	11	563	1	4	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3411199-3411966	Cluster_3301	Pocillopora_meandrina_HIv1___Sc0000010	3411199	3411966	768	726	121	1.0	+	UGCAAAAUCGACUCCGAUAACCUCAAAUGG	194	0	723	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3413713-3414157	Cluster_3302	Pocillopora_meandrina_HIv1___Sc0000010	3413713	3414157	445	270	127	0.9666666666666667	+	UCAUCUACAGUCGCAGUUUCAACUUCUAGU	27	2	256	0	5	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3414708-3415123	Cluster_3303	Pocillopora_meandrina_HIv1___Sc0000010	3414708	3415123	416	85	38	0.9058823529411765	+	UGUAUUCUGCUACUGGUUCUCCCGAGC	28	3	78	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3415285-3416188	Cluster_3304	Pocillopora_meandrina_HIv1___Sc0000010	3415285	3416188	904	1081	303	0.9259944495837188	+	UUGGCGUAGUUUCGUUUGCGUGAAAUGUU	157	8	1035	5	5	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3416831-3417254	Cluster_3305	Pocillopora_meandrina_HIv1___Sc0000010	3416831	3417254	424	81	31	0.0	-	AUUGAAAACGAUCUCGGGCGCCCAGAACA	19	0	78	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3644374-3644993	Cluster_3306	Pocillopora_meandrina_HIv1___Sc0000010	3644374	3644993	620	318	129	0.02830188679245283	-	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	43	1	314	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3658432-3658849	Cluster_3307	Pocillopora_meandrina_HIv1___Sc0000010	3658432	3658849	418	162	14	0.9382716049382716	+	CUUUCUGGAGUUAAGGUU	139	153	6	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3676348-3676967	Cluster_3308	Pocillopora_meandrina_HIv1___Sc0000010	3676348	3676967	620	284	122	0.04929577464788732	-	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	59	1	275	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3747752-3748577	Cluster_3309	Pocillopora_meandrina_HIv1___Sc0000010	3747752	3748577	826	2620	648	0.8534351145038168	+	UUAUCAACAGUACGGUUUGACUUGAAUC	280	28	2471	11	30	17	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3940413-3940841	Cluster_3310	Pocillopora_meandrina_HIv1___Sc0000010	3940413	3940841	429	150	24	1.0	+	UGAGUCAAGAUUUGCUUCCACCUGAAGGC	62	1	144	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4088544-4088984	Cluster_3311	Pocillopora_meandrina_HIv1___Sc0000010	4088544	4088984	441	2383	194	0.9899286613512379	+	UGCUGAAAAUCUGGACUUCUCGUAGAGC	640	5	2296	0	0	69	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4358728-4359428	Cluster_3312	Pocillopora_meandrina_HIv1___Sc0000010	4358728	4359428	701	675	219	0.8385185185185186	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	118	15	625	3	1	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4359958-4360363	Cluster_3313	Pocillopora_meandrina_HIv1___Sc0000010	4359958	4360363	406	260	165	0.8538461538461538	+	UAGAGACUUUAAGUACUGGAAAUACUU	9	4	232	4	5	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4480456-4481231	Cluster_3314	Pocillopora_meandrina_HIv1___Sc0000010	4480456	4481231	776	1251	236	0.35091926458832934	.	UCACCAUGAAAAGACUCUGGGCCAAAG	132	6	1181	3	4	14	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4481708-4482136	Cluster_3315	Pocillopora_meandrina_HIv1___Sc0000010	4481708	4482136	429	247	43	0.22672064777327935	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	98	7	234	3	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4482895-4483325	Cluster_3316	Pocillopora_meandrina_HIv1___Sc0000010	4482895	4483325	431	1463	147	0.9712918660287081	+	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	384	4	1449	3	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4483687-4484591	Cluster_3317	Pocillopora_meandrina_HIv1___Sc0000010	4483687	4484591	905	1464	309	0.7117486338797814	.	UAAGGAAAGUCUUUUCUGGGGUCUCCAAA	341	5	1384	3	16	11	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4573143-4573569	Cluster_3318	Pocillopora_meandrina_HIv1___Sc0000010	4573143	4573569	427	137	71	0.9343065693430657	+	UAGAAUCUCUUCACCUAUAUGCAUCAU	28	2	130	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4573776-4575017	Cluster_3319	Pocillopora_meandrina_HIv1___Sc0000010	4573776	4575017	1242	5582	827	0.790935148692225	.	UACUUGUCGAAGUCCUGGCCCUCUAGCC	647	43	4622	17	80	433	387	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5041259-5041677	Cluster_3320	Pocillopora_meandrina_HIv1___Sc0000010	5041259	5041677	419	80	27	0.0	-	UGUAGAACUGUCCGCCCAG	15	43	11	18	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5046153-5046580	Cluster_3321	Pocillopora_meandrina_HIv1___Sc0000010	5046153	5046580	428	489	114	0.9325153374233128	+	UCGACGUCGAUAUCAACAUUCUUAAUGU	207	2	473	0	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5080307-5080730	Cluster_3322	Pocillopora_meandrina_HIv1___Sc0000010	5080307	5080730	424	131	61	1.0	+	UGCACUACACAGCCUCAGACAUUG	12	12	80	3	5	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5112513-5112980	Cluster_3323	Pocillopora_meandrina_HIv1___Sc0000010	5112513	5112980	468	308	218	1.0	+	GACGAAAGAAAGUUGUGGACGCA	6	97	103	22	27	34	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5121116-5121530	Cluster_3324	Pocillopora_meandrina_HIv1___Sc0000010	5121116	5121530	415	233	170	1.0	+	UGAUAACAUAAUCUGCGGCAUCACCUCUGU	11	51	120	15	13	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5169129-5169549	Cluster_3325	Pocillopora_meandrina_HIv1___Sc0000010	5169129	5169549	421	84	24	1.0	+	UGCCAGACCUCUUACAAACCUCU	26	5	2	7	17	50	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5184027-5184454	Cluster_3326	Pocillopora_meandrina_HIv1___Sc0000010	5184027	5184454	428	191	85	0.015706806282722512	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	29	6	172	0	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5215689-5216108	Cluster_3327	Pocillopora_meandrina_HIv1___Sc0000010	5215689	5216108	420	185	119	0.0	-	ACGGAAAAGUCUGACACUGA	12	54	71	15	14	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5218837-5219246	Cluster_3328	Pocillopora_meandrina_HIv1___Sc0000010	5218837	5219246	410	179	131	0.0	-	GGUGAUUGCUGACGGCUGUGCU	6	37	66	21	24	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5386985-5387412	Cluster_3329	Pocillopora_meandrina_HIv1___Sc0000010	5386985	5387412	428	93	13	0.010752688172043012	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	39	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5454680-5455264	Cluster_3330	Pocillopora_meandrina_HIv1___Sc0000010	5454680	5455264	585	3315	407	0.41508295625942687	.	UGUAUGGCAAAGUUCUAAUAUUAAAAAAUU	669	23	2147	138	28	276	703	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5456220-5456936	Cluster_3331	Pocillopora_meandrina_HIv1___Sc0000010	5456220	5456936	717	417	138	0.7841726618705036	.	UGAUGCAAUCUGUUUCUGCAUGAGGGCUGC	53	4	363	5	8	18	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5463922-5464390	Cluster_3332	Pocillopora_meandrina_HIv1___Sc0000010	5463922	5464390	469	196	111	0.6326530612244898	.	UGUAAGACGCACUCUACUCUGUUGU	15	6	173	0	1	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5464715-5465144	Cluster_3333	Pocillopora_meandrina_HIv1___Sc0000010	5464715	5465144	430	120	43	0.9416666666666667	+	AGUUGACAUAUUGACUGGUACAAACAAGGA	64	8	108	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5487259-5487685	Cluster_3334	Pocillopora_meandrina_HIv1___Sc0000010	5487259	5487685	427	297	33	0.9831649831649831	+	GUCCGUCCUAAAGGAAACCCCUGCAA	109	4	283	3	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5840138-5840633	Cluster_3335	Pocillopora_meandrina_HIv1___Sc0000010	5840138	5840633	496	590	68	0.0	-	CGUUACUGUUUGUCUGUAAGGGACGUGAU	83	0	588	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5846252-5846678	Cluster_3336	Pocillopora_meandrina_HIv1___Sc0000010	5846252	5846678	427	212	44	0.09905660377358491	-	AGGGACUGAAACAUCGACUGAAGACG	60	1	179	6	0	6	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5905579-5906074	Cluster_3337	Pocillopora_meandrina_HIv1___Sc0000010	5905579	5906074	496	543	80	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	91	0	537	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5952667-5953092	Cluster_3338	Pocillopora_meandrina_HIv1___Sc0000010	5952667	5953092	426	147	41	0.04081632653061224	-	UCUUGCUUUGGGCUAAUGAUAAGACAU	33	2	101	17	5	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6015149-6015576	Cluster_3339	Pocillopora_meandrina_HIv1___Sc0000010	6015149	6015576	428	173	50	0.9364161849710982	+	UUAGAGAAUGCAAACCCAAUUUGGACGG	48	2	156	1	5	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6072176-6072604	Cluster_3340	Pocillopora_meandrina_HIv1___Sc0000010	6072176	6072604	429	352	47	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	80	0	351	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6130485-6130913	Cluster_3341	Pocillopora_meandrina_HIv1___Sc0000010	6130485	6130913	429	391	53	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	92	0	391	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6186986-6187481	Cluster_3342	Pocillopora_meandrina_HIv1___Sc0000010	6186986	6187481	496	506	86	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	94	1	499	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6239131-6239626	Cluster_3343	Pocillopora_meandrina_HIv1___Sc0000010	6239131	6239626	496	575	59	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	83	0	575	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6359214-6359709	Cluster_3344	Pocillopora_meandrina_HIv1___Sc0000010	6359214	6359709	496	418	71	0.0	-	UCUUGCUUUGGGCUAAUGUUAAGACGUGU	62	4	408	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6433080-6433718	Cluster_3345	Pocillopora_meandrina_HIv1___Sc0000010	6433080	6433718	639	549	298	0.12750455373406194	-	UAAUGCUUAGUAAUGUCGACACACGAACUA	28	12	504	3	10	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6434402-6434829	Cluster_3346	Pocillopora_meandrina_HIv1___Sc0000010	6434402	6434829	428	246	124	0.1991869918699187	-	UGCGUACUUUGUUUGGCUUCACUAUGGC	36	3	214	2	2	8	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6435309-6435744	Cluster_3347	Pocillopora_meandrina_HIv1___Sc0000010	6435309	6435744	436	393	127	0.015267175572519083	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	52	2	385	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6435818-6436243	Cluster_3348	Pocillopora_meandrina_HIv1___Sc0000010	6435818	6436243	426	178	80	0.05056179775280899	-	UAUGUGAUCGGUGAAUUUGCUUCAACA	20	0	166	1	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6436832-6437255	Cluster_3349	Pocillopora_meandrina_HIv1___Sc0000010	6436832	6437255	424	135	72	0.05185185185185185	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	18	0	129	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6468262-6468688	Cluster_3350	Pocillopora_meandrina_HIv1___Sc0000010	6468262	6468688	427	198	99	0.13636363636363635	-	AGUUGACAUAUGGACUGGUACAAACAAGGG	11	9	128	11	8	15	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6504286-6504781	Cluster_3351	Pocillopora_meandrina_HIv1___Sc0000010	6504286	6504781	496	505	71	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	87	0	503	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6531965-6533590	Cluster_3352	Pocillopora_meandrina_HIv1___Sc0000010	6531965	6533590	1626	4462	1045	0.7393545495293591	.	UAAUGUGAAUUUUUGGAUCAUUGGUUGUG	158	42	3944	57	40	131	248	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6564274-6564702	Cluster_3353	Pocillopora_meandrina_HIv1___Sc0000010	6564274	6564702	429	396	53	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	90	2	391	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6635003-6635431	Cluster_3354	Pocillopora_meandrina_HIv1___Sc0000010	6635003	6635431	429	431	65	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	93	0	431	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6696554-6697112	Cluster_3355	Pocillopora_meandrina_HIv1___Sc0000010	6696554	6697112	559	552	105	0.9710144927536232	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	137	2	541	0	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6735763-6736193	Cluster_3356	Pocillopora_meandrina_HIv1___Sc0000010	6735763	6736193	431	234	55	0.07692307692307693	-	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	43	2	226	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6740567-6740994	Cluster_3357	Pocillopora_meandrina_HIv1___Sc0000010	6740567	6740994	428	188	68	0.10106382978723404	-	ACAAGCGAUAUGUGGACCUUGAUCUGCGA	31	1	183	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6741198-6741626	Cluster_3358	Pocillopora_meandrina_HIv1___Sc0000010	6741198	6741626	429	223	65	0.026905829596412557	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	79	0	208	0	1	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6796012-6796440	Cluster_3359	Pocillopora_meandrina_HIv1___Sc0000010	6796012	6796440	429	353	35	0.9943342776203966	+	AGUGACUGAAAAAAAAAAAAAAAAAA	46	12	279	6	14	23	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6844842-6845256	Cluster_3360	Pocillopora_meandrina_HIv1___Sc0000010	6844842	6845256	415	76	35	0.9605263157894737	+	UGUGUAGAUAUGUCUUUUGGACAGGA	17	1	74	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6995127-6995546	Cluster_3361	Pocillopora_meandrina_HIv1___Sc0000010	6995127	6995546	420	2535	85	0.0003944773175542406	-	GUAGUCGUGGCCGAGUGG	1316	2478	14	13	3	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7063587-7064016	Cluster_3362	Pocillopora_meandrina_HIv1___Sc0000010	7063587	7064016	430	278	88	0.017985611510791366	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGC	22	0	265	0	3	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7067135-7067630	Cluster_3363	Pocillopora_meandrina_HIv1___Sc0000010	7067135	7067630	496	520	73	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	92	1	518	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7121699-7122127	Cluster_3364	Pocillopora_meandrina_HIv1___Sc0000010	7121699	7122127	429	408	63	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	80	0	405	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7141349-7141749	Cluster_3365	Pocillopora_meandrina_HIv1___Sc0000010	7141349	7141749	401	202	127	0.11386138613861387	-	UAGAGACUUUAAGUACUGGAAAUACUUA	14	3	181	3	1	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7141817-7142786	Cluster_3366	Pocillopora_meandrina_HIv1___Sc0000010	7141817	7142786	970	814	351	0.21253071253071254	.	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	108	22	722	5	9	19	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7181896-7182334	Cluster_3367	Pocillopora_meandrina_HIv1___Sc0000010	7181896	7182334	439	981	124	0.02854230377166157	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGU	320	3	953	2	16	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7188769-7189197	Cluster_3368	Pocillopora_meandrina_HIv1___Sc0000010	7188769	7189197	429	334	72	0.03293413173652695	-	UAGGACAACUGAGAAUCCACGUAGACUC	118	1	323	1	5	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7190894-7191322	Cluster_3369	Pocillopora_meandrina_HIv1___Sc0000010	7190894	7191322	429	419	59	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	90	0	419	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7239251-7239778	Cluster_3370	Pocillopora_meandrina_HIv1___Sc0000010	7239251	7239778	528	810	203	0.08395061728395062	-	UGAUAUAAAUGACAAAAAGUAAAGGGC	215	19	732	6	6	28	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7239838-7240267	Cluster_3371	Pocillopora_meandrina_HIv1___Sc0000010	7239838	7240267	430	155	58	0.025806451612903226	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	25	1	151	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7258053-7258481	Cluster_3372	Pocillopora_meandrina_HIv1___Sc0000010	7258053	7258481	429	383	51	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	107	0	382	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7364532-7364960	Cluster_3373	Pocillopora_meandrina_HIv1___Sc0000010	7364532	7364960	429	347	49	0.9971181556195965	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	83	0	346	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7435837-7436265	Cluster_3374	Pocillopora_meandrina_HIv1___Sc0000010	7435837	7436265	429	414	54	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	95	0	414	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7460500-7462048	Cluster_3375	Pocillopora_meandrina_HIv1___Sc0000010	7460500	7462048	1549	1969	728	0.9512442864398172	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	82	31	1801	15	9	78	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7462252-7462675	Cluster_3376	Pocillopora_meandrina_HIv1___Sc0000010	7462252	7462675	424	222	130	0.9684684684684685	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	28	1	203	3	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7463684-7464736	Cluster_3377	Pocillopora_meandrina_HIv1___Sc0000010	7463684	7464736	1053	4186	780	0.9849498327759197	+	UCUGUCUGUAUUGUUUUGGACCACGAC	933	33	4066	16	11	30	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7464863-7465856	Cluster_3378	Pocillopora_meandrina_HIv1___Sc0000010	7464863	7465856	994	1138	476	0.9340949033391915	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	88	10	1052	7	9	16	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7465975-7466467	Cluster_3379	Pocillopora_meandrina_HIv1___Sc0000010	7465975	7466467	493	513	287	0.7953216374269005	.	UGAAUUUCGAUCUGCAGACUCUCGGUA	17	4	445	3	9	14	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7500043-7500465	Cluster_3380	Pocillopora_meandrina_HIv1___Sc0000010	7500043	7500465	423	212	62	0.6509433962264151	.	CAAGUUGUAAAUUAUGGGUCGUG	62	2	115	0	4	64	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7535101-7535529	Cluster_3381	Pocillopora_meandrina_HIv1___Sc0000010	7535101	7535529	429	371	59	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	90	1	367	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7597296-7597855	Cluster_3382	Pocillopora_meandrina_HIv1___Sc0000010	7597296	7597855	560	957	142	0.02612330198537095	-	UGCAAACCCAAUUUGGACGGUUCAACUCC	289	0	947	0	9	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7604154-7604584	Cluster_3383	Pocillopora_meandrina_HIv1___Sc0000010	7604154	7604584	431	2967	124	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUGU	504	1	2964	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7665815-7666243	Cluster_3384	Pocillopora_meandrina_HIv1___Sc0000010	7665815	7666243	429	375	46	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	94	0	375	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7738519-7738947	Cluster_3385	Pocillopora_meandrina_HIv1___Sc0000010	7738519	7738947	429	401	58	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	84	1	398	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7900802-7901231	Cluster_3386	Pocillopora_meandrina_HIv1___Sc0000010	7900802	7901231	430	982	96	0.9979633401221996	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUA	564	5	894	2	8	6	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8008738-8009160	Cluster_3387	Pocillopora_meandrina_HIv1___Sc0000010	8008738	8009160	423	1112	82	0.9595323741007195	+	UACUUAAAUGUUAUUGGUUUGU	358	11	44	2	581	441	33	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8010736-8011158	Cluster_3388	Pocillopora_meandrina_HIv1___Sc0000010	8010736	8011158	423	1698	80	0.9740871613663133	+	UACUUAAAUGUUAUUGGUUUGU	576	11	48	2	896	712	29	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8012916-8013008	Cluster_3389	Pocillopora_meandrina_HIv1___Sc0000010	8012916	8013008	93	26677	314	0.9910409716234959	+	UACUUCAAUGUUAUCGGUUUGU	7987	404	130	142	12956	11855	1190	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000010:8076458-8077344	Cluster_3390	Pocillopora_meandrina_HIv1___Sc0000010	8076458	8077344	887	1570	326	0.2949044585987261	.	UUGUUACAAUGGAAUUCUCAUCUUCUAG	165	11	1496	6	2	26	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8149899-8150326	Cluster_3391	Pocillopora_meandrina_HIv1___Sc0000010	8149899	8150326	428	212	119	0.9386792452830188	+	UAUUCCAAGAUUGGCCGUACCAGAGACA	22	4	198	0	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8262784-8263213	Cluster_3392	Pocillopora_meandrina_HIv1___Sc0000010	8262784	8263213	430	118	36	0.1864406779661017	-	UGCUUUGGACGAAAUUUCGAGGUUCACACU	60	9	88	15	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8395007-8395434	Cluster_3393	Pocillopora_meandrina_HIv1___Sc0000010	8395007	8395434	428	225	116	0.7511111111111111	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	14	0	213	0	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8396952-8397379	Cluster_3394	Pocillopora_meandrina_HIv1___Sc0000010	8396952	8397379	428	244	115	0.04918032786885246	-	UAUUGACGAAUUUUCUGAGUACCUUGAAUC	24	0	237	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8397444-8397884	Cluster_3395	Pocillopora_meandrina_HIv1___Sc0000010	8397444	8397884	441	407	194	0.23095823095823095	.	UGCUCGCUCUAUUUCAAACAAAUCUGCACU	25	12	344	3	5	17	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8565037-8565455	Cluster_3396	Pocillopora_meandrina_HIv1___Sc0000010	8565037	8565455	419	156	66	0.0	-	GCGUUGGUGGUAUAGUGGU	50	124	18	3	4	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8566513-8566931	Cluster_3397	Pocillopora_meandrina_HIv1___Sc0000010	8566513	8566931	419	257	69	0.0	-	GCGUUGGUGGUAUAGUGGU	92	181	51	15	6	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8583892-8584344	Cluster_3398	Pocillopora_meandrina_HIv1___Sc0000010	8583892	8584344	453	313	191	0.4472843450479233	.	UUAACGGCUGUGUAGGAUAGAAUCGUCAACC	22	133	92	67	14	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8672504-8672930	Cluster_3399	Pocillopora_meandrina_HIv1___Sc0000010	8672504	8672930	427	193	28	0.010362694300518135	-	AUGCAUUGCCGAUAUUUACUUUAUUUG	94	2	180	2	7	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8752679-8753159	Cluster_3400	Pocillopora_meandrina_HIv1___Sc0000010	8752679	8753159	481	531	124	0.08851224105461393	-	AAGUUUUCCAACGACUCGUUUCUCUGCG	176	0	499	0	0	12	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8886490-8887042	Cluster_3401	Pocillopora_meandrina_HIv1___Sc0000010	8886490	8887042	553	707	287	0.007072135785007072	-	UGGCUGAGCUUCGCGUGUUU	37	182	228	104	58	73	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8891665-8892085	Cluster_3402	Pocillopora_meandrina_HIv1___Sc0000010	8891665	8892085	421	261	113	0.6206896551724138	.	AUUGUGCACCGUGUACCCUCU	42	103	13	115	20	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8902782-8903326	Cluster_3403	Pocillopora_meandrina_HIv1___Sc0000010	8902782	8903326	545	1213	450	0.03462489694971146	-	CGUACGCGCUCGUUGGCCCUC	87	339	189	381	91	132	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8921529-8922238	Cluster_3404	Pocillopora_meandrina_HIv1___Sc0000010	8921529	8922238	710	968	247	0.9721074380165289	+	UGUAAGACUGACAAAGGCUAAGGUGAACAGC	116	5	914	2	5	21	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9015035-9015513	Cluster_3405	Pocillopora_meandrina_HIv1___Sc0000010	9015035	9015513	479	11554	897	0.9983555478622123	+	AUCUAAUGAUGACAGCCUCAGU	2229	2397	2577	925	3734	1536	385	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9079066-9079544	Cluster_3406	Pocillopora_meandrina_HIv1___Sc0000010	9079066	9079544	479	1573	398	0.9993642720915448	+	AGGGAAUGACGAUAACCUUGGAGC	120	225	728	149	150	110	211	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9257329-9257857	Cluster_3407	Pocillopora_meandrina_HIv1___Sc0000010	9257329	9257857	529	4960	1031	0.0004032258064516129	-	GAGGAACGUGAUGAGAGA	312	1684	2140	259	339	242	296	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9315058-9315482	Cluster_3408	Pocillopora_meandrina_HIv1___Sc0000010	9315058	9315482	425	699	92	1.0	+	UGCAAGCAUUAGUGGUGUGUCUCU	174	14	130	23	17	45	470	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9717805-9718228	Cluster_3409	Pocillopora_meandrina_HIv1___Sc0000010	9717805	9718228	424	159	53	0.0	-	GCGGUCUUUGAUUUACAAGUCU	20	17	57	0	44	13	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9759460-9759889	Cluster_3410	Pocillopora_meandrina_HIv1___Sc0000010	9759460	9759889	430	124	35	0.9919354838709677	+	ACUGAAGAAAAUUAUAGAAAGGCAACUGAG	44	1	122	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9776404-9776828	Cluster_3411	Pocillopora_meandrina_HIv1___Sc0000010	9776404	9776828	425	176	58	0.0	-	GUGGUCUUUGAUUUACAAGUCUGGU	50	11	101	4	15	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9834830-9835310	Cluster_3412	Pocillopora_meandrina_HIv1___Sc0000010	9834830	9835310	481	767	245	1.0	+	CUGAUAAAAGUCAUCAAAACCCUGAGAA	93	73	552	22	41	26	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9847650-9848069	Cluster_3413	Pocillopora_meandrina_HIv1___Sc0000010	9847650	9848069	420	163	17	0.049079754601226995	-	UCUUGAUGUUUGAGCUGAGC	71	152	2	8	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9879710-9880136	Cluster_3414	Pocillopora_meandrina_HIv1___Sc0000010	9879710	9880136	427	77	16	1.0	+	CGCGGAAAGAGGAGAGAUUGCUUGUGCACC	26	2	75	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9938591-9939013	Cluster_3415	Pocillopora_meandrina_HIv1___Sc0000010	9938591	9939013	423	182	33	0.9945054945054945	+	UUAUAAUUUACAAACUCUUCUUA	89	4	23	10	28	113	4	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10103315-10103786	Cluster_3416	Pocillopora_meandrina_HIv1___Sc0000010	10103315	10103786	472	11273	519	0.999556462343653	+	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	2989	543	10299	42	275	60	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10172945-10173373	Cluster_3417	Pocillopora_meandrina_HIv1___Sc0000010	10172945	10173373	429	139	40	0.8561151079136691	+	UCGAUUCCACCGAAAGAAAUAACCUGUGC	56	7	129	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10263677-10264104	Cluster_3418	Pocillopora_meandrina_HIv1___Sc0000010	10263677	10264104	428	72	13	1.0	+	AACUGAAGAACCGAUCUCUGAAAUUGAUA	37	1	69	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10888007-10888889	Cluster_3419	Pocillopora_meandrina_HIv1___Sc0000010	10888007	10888889	883	1008	720	0.001984126984126984	-	GACGGAUUAGGAUUGUUUCUUAGGGCAACA	7	214	485	71	86	81	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10889115-10889522	Cluster_3420	Pocillopora_meandrina_HIv1___Sc0000010	10889115	10889522	408	154	113	0.0	-	GAAGAUCAAGGAAACCAUGAAUACU	6	33	70	8	11	19	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11053919-11054459	Cluster_3421	Pocillopora_meandrina_HIv1___Sc0000010	11053919	11054459	541	871	261	0.0	-	GGUGCACUUGUGAAUGGAGCA	156	305	210	227	78	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11163947-11164372	Cluster_3422	Pocillopora_meandrina_HIv1___Sc0000010	11163947	11164372	426	211	103	0.0	-	CAUUGUAGAGUGGUUAUGGCU	13	23	50	31	33	48	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11164832-11165249	Cluster_3423	Pocillopora_meandrina_HIv1___Sc0000010	11164832	11165249	418	171	82	0.0	-	UCAGCCUGAAAGAAAACU	48	102	48	5	5	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11196232-11196659	Cluster_3424	Pocillopora_meandrina_HIv1___Sc0000010	11196232	11196659	428	111	33	1.0	+	UGACAGCUCAUCGAUCAGAAAACAAAGA	30	0	110	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11199054-11199462	Cluster_3425	Pocillopora_meandrina_HIv1___Sc0000010	11199054	11199462	409	147	83	0.5918367346938775	.	UUGUGUCAACUCUCGCCAGA	11	48	69	16	10	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11584486-11584903	Cluster_3426	Pocillopora_meandrina_HIv1___Sc0000010	11584486	11584903	418	498	13	1.0	+	CAGCUGUGGCCCUCGGGC	249	498	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:263839-264256	Cluster_3427	Pocillopora_meandrina_HIv1___Sc0000011	263839	264256	418	626	18	0.011182108626198083	-	CGCUACUUUGACCUCAUA	592	619	6	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:350050-350469	Cluster_3428	Pocillopora_meandrina_HIv1___Sc0000011	350050	350469	420	103	17	0.038834951456310676	-	UAGUGCUGAGUACUCUGAGCU	47	31	2	59	8	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:610820-611227	Cluster_3429	Pocillopora_meandrina_HIv1___Sc0000011	610820	611227	408	93	65	0.0	-	UGUGUGACUGCGAGAUUGCU	13	34	24	5	9	18	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:716133-716553	Cluster_3430	Pocillopora_meandrina_HIv1___Sc0000011	716133	716553	421	230	148	0.0	-	GGUGACUAAGACUGAGCAAGC	10	50	91	33	17	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:728487-728888	Cluster_3431	Pocillopora_meandrina_HIv1___Sc0000011	728487	728888	402	178	109	0.9719101123595506	+	UAACGAACUAUGACAGCAAGGGCCUCAC	13	2	172	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1136360-1136777	Cluster_3432	Pocillopora_meandrina_HIv1___Sc0000011	1136360	1136777	418	191	9	0.031413612565445025	-	UACCUGGUUGAUUCUGCA	180	188	0	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1205065-1205492	Cluster_3433	Pocillopora_meandrina_HIv1___Sc0000011	1205065	1205492	428	174	66	0.0	-	UUUGAUUGACGUACGGUAUUUGAGACGC	24	3	164	0	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1284991-1285406	Cluster_3434	Pocillopora_meandrina_HIv1___Sc0000011	1284991	1285406	416	178	120	0.48314606741573035	.	UCGGGAUAUGUAGUUGCGUCA	12	94	13	55	11	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1293175-1293610	Cluster_3435	Pocillopora_meandrina_HIv1___Sc0000011	1293175	1293610	436	227	89	0.10572687224669604	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	42	0	197	0	1	19	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1294897-1295316	Cluster_3436	Pocillopora_meandrina_HIv1___Sc0000011	1294897	1295316	420	152	91	0.08552631578947369	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	24	2	136	2	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1295664-1296094	Cluster_3437	Pocillopora_meandrina_HIv1___Sc0000011	1295664	1296094	431	671	189	0.01639344262295082	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	164	0	644	1	6	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1313428-1313857	Cluster_3438	Pocillopora_meandrina_HIv1___Sc0000011	1313428	1313857	430	221	56	0.05429864253393665	-	AGACAAAACAAGAUUUUGAGAACUGCUUCA	59	2	207	0	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1415864-1417125	Cluster_3439	Pocillopora_meandrina_HIv1___Sc0000011	1415864	1417125	1262	1399	367	0.11508220157255182	-	UAUCCAUGGUACAAAAAUUCGACUCACA	133	14	1286	6	6	16	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1449371-1449821	Cluster_3440	Pocillopora_meandrina_HIv1___Sc0000011	1449371	1449821	451	318	132	0.330188679245283	.	AGUUGACAUACUGACUGGUACAAAUAAUGGU	20	12	258	7	10	3	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1450351-1450779	Cluster_3441	Pocillopora_meandrina_HIv1___Sc0000011	1450351	1450779	429	103	21	0.08737864077669903	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	39	1	101	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1575633-1576050	Cluster_3442	Pocillopora_meandrina_HIv1___Sc0000011	1575633	1576050	418	145	7	0.9724137931034482	+	UACCCGGAGGAAAAGAAA	138	141	1	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2021516-2021940	Cluster_3443	Pocillopora_meandrina_HIv1___Sc0000011	2021516	2021940	425	89	37	0.9662921348314607	+	UUCUGUGAUAUGGAGGUGCUAUCGUCCGU	13	5	77	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2022131-2022898	Cluster_3444	Pocillopora_meandrina_HIv1___Sc0000011	2022131	2022898	768	3929	204	0.06057520997709341	-	CUGGAAAUUUGACUUGCAUGUAGUGUGAUC	2077	9	3825	20	6	14	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2113956-2114378	Cluster_3445	Pocillopora_meandrina_HIv1___Sc0000011	2113956	2114378	423	139	78	0.0	-	AGAGGAAGAACGUGAACGAA	9	43	55	10	6	17	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2235128-2235748	Cluster_3446	Pocillopora_meandrina_HIv1___Sc0000011	2235128	2235748	621	1734	293	0.9567474048442907	+	UCAAAUACAACACCAAAAGAC	568	316	700	632	26	22	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2235755-2236521	Cluster_3447	Pocillopora_meandrina_HIv1___Sc0000011	2235755	2236521	767	668	307	0.9011976047904192	+	UUCGAACGAGCGUACGCAACGGUGUAUC	37	14	603	12	8	13	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2290352-2290769	Cluster_3448	Pocillopora_meandrina_HIv1___Sc0000011	2290352	2290769	418	128	20	0.0	-	AUCCCUCCGGUGCCUCCC	91	117	5	3	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2312713-2313120	Cluster_3449	Pocillopora_meandrina_HIv1___Sc0000011	2312713	2313120	408	114	85	1.0	+	GUGUUAAAAUUCAGCUGGACUG	5	22	50	5	11	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2575797-2576978	Cluster_3450	Pocillopora_meandrina_HIv1___Sc0000011	2575797	2576978	1182	4625	440	0.7945945945945946	.	UCAGUCCAAGAUCAUUGAAGCCUCCCGUC	683	35	4459	50	7	23	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2577100-2577509	Cluster_3451	Pocillopora_meandrina_HIv1___Sc0000011	2577100	2577509	410	228	126	0.7017543859649122	.	UAAACAACUCUCCGAUUUAAAUCUUUUCCUU	15	1	201	5	1	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2595018-2595447	Cluster_3452	Pocillopora_meandrina_HIv1___Sc0000011	2595018	2595447	430	108	8	1.0	+	UUUGUGAUGAUUGUGGUCUUGCUACUGGUG	92	0	108	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2740916-2741333	Cluster_3453	Pocillopora_meandrina_HIv1___Sc0000011	2740916	2741333	418	384	16	0.0	-	CUUUCCGAGGUCGCGGAU	306	383	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2863633-2864064	Cluster_3454	Pocillopora_meandrina_HIv1___Sc0000011	2863633	2864064	432	360	87	0.925	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	59	0	357	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3070672-3071108	Cluster_3455	Pocillopora_meandrina_HIv1___Sc0000011	3070672	3071108	437	302	101	0.9933774834437086	+	UGAUCAUGCCGUCUGAUGCUAUGCCUUU	67	0	301	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3071247-3071764	Cluster_3456	Pocillopora_meandrina_HIv1___Sc0000011	3071247	3071764	518	4300	540	0.8932558139534884	+	UUGGACGCGUUGCUUGUCUGAACAAGGC	613	14	3967	26	13	136	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3073868-3074297	Cluster_3457	Pocillopora_meandrina_HIv1___Sc0000011	3073868	3074297	430	175	54	0.9885714285714285	+	UGUACUGUGAACAUAGUGUUACCAACCAUU	82	0	174	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3164536-3165009	Cluster_3458	Pocillopora_meandrina_HIv1___Sc0000011	3164536	3165009	474	594	137	0.1734006734006734	-	AAGUAUCGAAACGAUCAAGAAGUAAGUC	127	3	568	1	5	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3260168-3260799	Cluster_3459	Pocillopora_meandrina_HIv1___Sc0000011	3260168	3260799	632	447	335	0.0022371364653243847	-	CAAAUGAUCAGUACUGGCA	6	112	176	39	41	48	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3261970-3262570	Cluster_3460	Pocillopora_meandrina_HIv1___Sc0000011	3261970	3262570	601	522	373	0.0	-	UGUGCCCUGAUGGUAAAACUGUAGAGUA	9	106	231	37	60	36	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3270264-3270678	Cluster_3461	Pocillopora_meandrina_HIv1___Sc0000011	3270264	3270678	415	269	192	0.0037174721189591076	-	AAACAGGACGACCAAGCUG	7	82	83	40	13	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3422687-3423112	Cluster_3462	Pocillopora_meandrina_HIv1___Sc0000011	3422687	3423112	426	172	65	0.877906976744186	+	UUUGUUAGGAGAGUCUGCAACUAAGC	30	3	158	3	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3431914-3432353	Cluster_3463	Pocillopora_meandrina_HIv1___Sc0000011	3431914	3432353	440	781	152	0.06914212548015365	-	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	147	9	744	6	3	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3437444-3437874	Cluster_3464	Pocillopora_meandrina_HIv1___Sc0000011	3437444	3437874	431	428	128	1.0	+	UGAUCUUUAAAGUGAAAUUCGCAGGACUUAA	124	1	421	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3478590-3478999	Cluster_3465	Pocillopora_meandrina_HIv1___Sc0000011	3478590	3478999	410	184	109	0.3695652173913043	.	ACUGGAUACAAAACUGCUCGAUGC	19	2	133	0	3	8	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3479394-3479821	Cluster_3466	Pocillopora_meandrina_HIv1___Sc0000011	3479394	3479821	428	199	78	0.02512562814070352	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	47	1	193	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3482219-3482716	Cluster_3467	Pocillopora_meandrina_HIv1___Sc0000011	3482219	3482716	498	1703	275	0.11802701115678214	-	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	155	8	1653	22	1	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3487323-3487892	Cluster_3468	Pocillopora_meandrina_HIv1___Sc0000011	3487323	3487892	570	360	126	1.0	+	UGAACCCGCGUCUGUCGUGCUACCAAGAUA	37	2	349	0	2	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3488573-3488991	Cluster_3469	Pocillopora_meandrina_HIv1___Sc0000011	3488573	3488991	419	120	48	1.0	+	UGUGCAUUGCAACAUCUGCUAGAUCCUUUGC	35	3	115	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3680930-3681472	Cluster_3470	Pocillopora_meandrina_HIv1___Sc0000011	3680930	3681472	543	455	191	0.07472527472527472	-	UUAAACCGACUCACAGUCCGAUUCGAAU	57	6	433	1	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3697531-3697934	Cluster_3471	Pocillopora_meandrina_HIv1___Sc0000011	3697531	3697934	404	203	147	1.0	+	AAGAUUGAUCCUGGCGCU	6	57	72	23	9	21	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3698610-3699028	Cluster_3472	Pocillopora_meandrina_HIv1___Sc0000011	3698610	3699028	419	214	137	1.0	+	CAUCGAAAAGAAUGGGACUUAUU	9	53	89	24	13	28	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3706023-3706443	Cluster_3473	Pocillopora_meandrina_HIv1___Sc0000011	3706023	3706443	421	252	164	0.996031746031746	+	CGUGAUCUAGAUGCGUGAUUCGGGGAU	16	70	91	31	15	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3706666-3707243	Cluster_3474	Pocillopora_meandrina_HIv1___Sc0000011	3706666	3707243	578	361	240	0.997229916897507	+	CAUCGAAAAGAAUGGGACUUAUU	10	74	143	32	32	35	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3743749-3744171	Cluster_3475	Pocillopora_meandrina_HIv1___Sc0000011	3743749	3744171	423	188	127	1.0	+	GACGUGGUUCGACAACUGAGAGAAU	10	52	90	7	19	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3767033-3767444	Cluster_3476	Pocillopora_meandrina_HIv1___Sc0000011	3767033	3767444	412	156	96	0.7948717948717948	.	UCUUGUGAUCUAUUCGAAUUGUUUGUGAU	12	8	122	2	3	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3851657-3852086	Cluster_3477	Pocillopora_meandrina_HIv1___Sc0000011	3851657	3852086	430	504	138	0.12103174603174603	-	UUGGAUAAUUUUGACGAAACCAGAGACA	178	4	460	1	9	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3852351-3852951	Cluster_3478	Pocillopora_meandrina_HIv1___Sc0000011	3852351	3852951	601	403	182	0.8784119106699751	+	AGUUUGCUGAUUUCCUGGUGCUUUGCGA	24	11	324	5	4	19	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3853490-3854454	Cluster_3479	Pocillopora_meandrina_HIv1___Sc0000011	3853490	3854454	965	1010	421	0.49207920792079207	.	ACAGGAAGUACAACCACAGA	90	140	821	5	13	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3855302-3855822	Cluster_3480	Pocillopora_meandrina_HIv1___Sc0000011	3855302	3855822	521	363	179	0.2892561983471074	.	UCCGUGUCUAGUCCUCCUUUUGAAUGUG	18	14	309	0	10	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4137651-4138080	Cluster_3481	Pocillopora_meandrina_HIv1___Sc0000011	4137651	4138080	430	567	51	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUCG	210	0	562	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4143432-4143861	Cluster_3482	Pocillopora_meandrina_HIv1___Sc0000011	4143432	4143861	430	304	70	0.02631578947368421	-	UGAUCAAGUUUCCUAUCGCCUGUAAACA	75	2	299	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4433355-4433774	Cluster_3483	Pocillopora_meandrina_HIv1___Sc0000011	4433355	4433774	420	347	252	1.0	+	AGAAUCAUGAGAGCUUUGGUACU	8	87	134	26	31	45	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4435430-4435847	Cluster_3484	Pocillopora_meandrina_HIv1___Sc0000011	4435430	4435847	418	197	127	1.0	+	UGUGCUGUGGGAUACUGU	11	87	41	20	25	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4543638-4544060	Cluster_3485	Pocillopora_meandrina_HIv1___Sc0000011	4543638	4544060	423	105	45	1.0	+	UUUCUGCUGGUUGGUGGAGCUCUGGCAGUU	21	20	61	9	7	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4551808-4552227	Cluster_3486	Pocillopora_meandrina_HIv1___Sc0000011	4551808	4552227	420	158	123	1.0	+	GGAAACUCGACGUAAACGCU	5	51	58	7	23	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4710882-4711311	Cluster_3487	Pocillopora_meandrina_HIv1___Sc0000011	4710882	4711311	430	152	65	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	38	0	151	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4885882-4886715	Cluster_3488	Pocillopora_meandrina_HIv1___Sc0000011	4885882	4886715	834	726	80	0.9889807162534435	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	139	0	702	1	0	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4887264-4887693	Cluster_3489	Pocillopora_meandrina_HIv1___Sc0000011	4887264	4887693	430	245	76	0.963265306122449	+	AUGGGUCUUAUUGAACAUUACAGAACAGCA	61	7	183	4	3	6	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4893406-4893830	Cluster_3490	Pocillopora_meandrina_HIv1___Sc0000011	4893406	4893830	425	135	72	0.9777777777777777	+	AGAGUUUUGAAGUAAAUCGGCGAAUCGUU	13	1	124	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4940748-4941167	Cluster_3491	Pocillopora_meandrina_HIv1___Sc0000011	4940748	4941167	420	112	44	0.0	-	CCCUUAACAGCUUGUACUCUG	26	37	22	40	6	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5608018-5608439	Cluster_3492	Pocillopora_meandrina_HIv1___Sc0000011	5608018	5608439	422	180	137	0.9833333333333333	+	AGGGCUGAAGCGACAGAGU	6	49	80	17	18	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5682043-5682449	Cluster_3493	Pocillopora_meandrina_HIv1___Sc0000011	5682043	5682449	407	95	77	0.0	-	GAAAUGGCGGUAGGACUCCACAAGGGUCA	4	23	46	5	1	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5740299-5740769	Cluster_3494	Pocillopora_meandrina_HIv1___Sc0000011	5740299	5740769	471	2269	416	1.0	+	CCCAAAUGAUGAGCAGAUU	192	547	1230	80	104	118	190	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5937066-5937593	Cluster_3495	Pocillopora_meandrina_HIv1___Sc0000011	5937066	5937593	528	307	142	0.3289902280130293	.	UCUUGACUCUUCUCGAUAUCCUCUAUGG	26	36	224	5	11	10	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5937633-5938061	Cluster_3496	Pocillopora_meandrina_HIv1___Sc0000011	5937633	5938061	429	176	39	0.011363636363636364	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	66	0	163	0	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6046750-6047559	Cluster_3497	Pocillopora_meandrina_HIv1___Sc0000011	6046750	6047559	810	654	229	0.04892966360856269	-	UCGGUGUUUUCAAUGUUUAUCGGUUCGG	56	1	628	1	8	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6190043-6190464	Cluster_3498	Pocillopora_meandrina_HIv1___Sc0000011	6190043	6190464	422	128	34	0.8671875	+	AAUUGGUAAUGAGAAUAAUCUA	60	15	0	13	79	18	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6215869-6216344	Cluster_3499	Pocillopora_meandrina_HIv1___Sc0000011	6215869	6216344	476	1779	312	0.0	-	AGCCAGUGACGACUUAAUAUAUUCA	121	206	1386	28	41	47	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6216755-6217183	Cluster_3500	Pocillopora_meandrina_HIv1___Sc0000011	6216755	6217183	429	240	111	0.004166666666666667	-	CCAAAAUUUCUGAGGCCA	18	60	107	11	8	23	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6217611-6218693	Cluster_3501	Pocillopora_meandrina_HIv1___Sc0000011	6217611	6218693	1083	5729	825	0.00017455053237912376	-	CACUCUGUGACUUGAUUAGAAAAUCU	475	948	3176	366	510	410	319	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6218840-6219312	Cluster_3502	Pocillopora_meandrina_HIv1___Sc0000011	6218840	6219312	473	16518	974	0.0	-	GUGUGUGAUGACUGCAUAGUUCAACUGAACA	5037	939	11947	613	613	872	1534	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6219545-6220346	Cluster_3503	Pocillopora_meandrina_HIv1___Sc0000011	6219545	6220346	802	3223	664	0.00031026993484331366	-	GCACCUGAUGAAAUAACCUAUGACACA	145	379	2081	149	199	174	241	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6220823-6221301	Cluster_3504	Pocillopora_meandrina_HIv1___Sc0000011	6220823	6221301	479	1913	529	0.0	-	GAGAAUCAUGACUGUGUCAACUGAAGGUA	54	249	1083	121	181	156	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6222022-6222433	Cluster_3505	Pocillopora_meandrina_HIv1___Sc0000011	6222022	6222433	412	199	153	1.0	+	GAGAGUUUGAACUGUGUC	4	49	80	17	19	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6224058-6224473	Cluster_3506	Pocillopora_meandrina_HIv1___Sc0000011	6224058	6224473	416	251	193	1.0	+	GCUGGCCUUAAUGUGAUGAGAAU	4	49	103	28	16	31	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6224571-6224977	Cluster_3507	Pocillopora_meandrina_HIv1___Sc0000011	6224571	6224977	407	246	174	1.0	+	UUCUUUGAUGGAGAGGACUUCUCAGA	6	61	99	17	15	16	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6225964-6226391	Cluster_3508	Pocillopora_meandrina_HIv1___Sc0000011	6225964	6226391	428	355	232	1.0	+	GUGCUGCUAAUGGACAUGAAAC	16	83	127	20	50	35	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6274499-6274927	Cluster_3509	Pocillopora_meandrina_HIv1___Sc0000011	6274499	6274927	429	360	33	0.10277777777777777	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	227	2	356	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6322907-6323442	Cluster_3510	Pocillopora_meandrina_HIv1___Sc0000011	6322907	6323442	536	2610	449	0.6295019157088123	.	AAGAGUGUUAUCUAUUUUAAUAAACUGAGU	481	7	2402	5	14	49	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6464950-6465485	Cluster_3511	Pocillopora_meandrina_HIv1___Sc0000011	6464950	6465485	536	600	210	0.805	+	UUAGCAAGGCUUUCAAACGGA	21	317	70	123	33	39	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6473164-6473733	Cluster_3512	Pocillopora_meandrina_HIv1___Sc0000011	6473164	6473733	570	4269	520	0.9948465682829702	+	AGAAGCGGUAGGAUCUCCUGUUCG	916	1027	1363	463	211	203	1002	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6476865-6477429	Cluster_3513	Pocillopora_meandrina_HIv1___Sc0000011	6476865	6477429	565	3014	824	0.9873921698739216	+	CAGAGUAGGUGCACCGCUGACA	141	1200	577	382	435	223	197	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6480859-6481343	Cluster_3514	Pocillopora_meandrina_HIv1___Sc0000011	6480859	6481343	485	749	336	0.9799732977303071	+	GUUACUGACGUAGGCUUGA	102	310	168	84	51	63	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6483576-6484067	Cluster_3515	Pocillopora_meandrina_HIv1___Sc0000011	6483576	6484067	492	713	197	0.9943899018232819	+	AGAAAAGGUGCACCGCUGGCA	51	359	148	143	41	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6485782-6486366	Cluster_3516	Pocillopora_meandrina_HIv1___Sc0000011	6485782	6486366	585	4889	956	0.9809777050521579	+	AAGUGAUCACCUGCCGUCA	1217	3131	857	366	184	194	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6489550-6490253	Cluster_3517	Pocillopora_meandrina_HIv1___Sc0000011	6489550	6490253	704	1573	534	0.9917355371900827	+	GUGUUCGGCUUAUAAAACGUCAAGGU	108	488	503	252	96	102	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6645201-6645717	Cluster_3518	Pocillopora_meandrina_HIv1___Sc0000011	6645201	6645717	517	234	79	0.36752136752136755	.	UUAGCGACGAGUGUUCUAUUUCCCUUCAGG	31	1	226	4	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6727213-6727637	Cluster_3519	Pocillopora_meandrina_HIv1___Sc0000011	6727213	6727637	425	117	69	0.9487179487179487	+	UUCAAUGGGAAAACGAGAAUAGCGUGAGU	12	1	91	3	1	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7000730-7001147	Cluster_3520	Pocillopora_meandrina_HIv1___Sc0000011	7000730	7001147	418	150	11	0.9933333333333333	+	UUCUUGGAAUUGCAUGCC	99	147	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7091780-7092359	Cluster_3521	Pocillopora_meandrina_HIv1___Sc0000011	7091780	7092359	580	402	107	0.572139303482587	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	120	6	333	4	3	20	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7092809-7093233	Cluster_3522	Pocillopora_meandrina_HIv1___Sc0000011	7092809	7093233	425	711	165	0.8284106891701828	+	UGAAGUCGAGCUAGAAGAGGA	91	239	133	241	60	31	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7517305-7517727	Cluster_3523	Pocillopora_meandrina_HIv1___Sc0000011	7517305	7517727	423	80	15	1.0	+	AGUGGAGGCCUGUAAUUGCUGCUC	30	6	31	0	0	12	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7538617-7539082	Cluster_3524	Pocillopora_meandrina_HIv1___Sc0000011	7538617	7539082	466	400	159	0.0175	-	UCUUCGGAGGCGUGGGUUC	43	254	41	30	39	25	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7637705-7638451	Cluster_3525	Pocillopora_meandrina_HIv1___Sc0000011	7637705	7638451	747	1173	706	0.0017050298380221654	-	CCACGGUGAUUGGGGAUUAA	14	263	552	88	79	86	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7638531-7638937	Cluster_3526	Pocillopora_meandrina_HIv1___Sc0000011	7638531	7638937	407	167	128	0.005988023952095809	-	GACAGAACUGUUGAUCAGAAAGC	4	46	74	17	5	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7768772-7769198	Cluster_3527	Pocillopora_meandrina_HIv1___Sc0000011	7768772	7769198	427	73	21	1.0	+	UAUUUGCACUAUUGUGGAAAAUUCCUGG	11	0	73	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7770864-7771293	Cluster_3528	Pocillopora_meandrina_HIv1___Sc0000011	7770864	7771293	430	363	27	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	192	0	363	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8011145-8011573	Cluster_3529	Pocillopora_meandrina_HIv1___Sc0000011	8011145	8011573	429	140	45	0.9642857142857143	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	20	1	138	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8012096-8012544	Cluster_3530	Pocillopora_meandrina_HIv1___Sc0000011	8012096	8012544	449	451	185	0.8181818181818182	+	UAUGACGUUCCAGAAUCUUUGACAAAA	39	3	433	1	4	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8012714-8013501	Cluster_3531	Pocillopora_meandrina_HIv1___Sc0000011	8012714	8013501	788	853	300	0.9531066822977726	+	UCCGUGACACAACGACUUUGCCUUGCUU	120	10	830	3	0	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8276048-8276475	Cluster_3532	Pocillopora_meandrina_HIv1___Sc0000011	8276048	8276475	428	148	55	0.20945945945945946	.	UAACAGGAUCAACAAAGUGUCGAGCAUG	31	1	143	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8412931-8413349	Cluster_3533	Pocillopora_meandrina_HIv1___Sc0000011	8412931	8413349	419	443	17	0.0	-	GGGGCUGUGGCUCAGUUGG	260	439	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8478554-8479134	Cluster_3534	Pocillopora_meandrina_HIv1___Sc0000011	8478554	8479134	581	1031	370	0.6333656644034917	.	CGUGUAAACAAGCGAUCUGUAAGA	112	25	764	18	16	31	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8490498-8491053	Cluster_3535	Pocillopora_meandrina_HIv1___Sc0000011	8490498	8491053	556	756	234	0.8928571428571429	+	UAGUAUAACUUUGAUCUGAUGAAAAUAAUC	286	9	696	3	12	11	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8492338-8492763	Cluster_3536	Pocillopora_meandrina_HIv1___Sc0000011	8492338	8492763	426	138	41	0.9855072463768116	+	UGAUAAUCAAAACGUCGGGCACAAGUCACU	55	0	125	2	2	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8494971-8496105	Cluster_3537	Pocillopora_meandrina_HIv1___Sc0000011	8494971	8496105	1135	7007	672	0.9523333809048095	+	UGAAAAAAUCUUCUGUUAUAAACACCUGA	1788	26	6650	26	15	83	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8499550-8500281	Cluster_3538	Pocillopora_meandrina_HIv1___Sc0000011	8499550	8500281	732	2099	261	0.8894711767508338	+	UGAGAAGAACUUCACUAACUUGACUAGUGA	965	9	2057	1	8	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8534433-8535505	Cluster_3539	Pocillopora_meandrina_HIv1___Sc0000011	8534433	8535505	1073	907	319	0.1543550165380375	-	UGUGAUGCUUGUAGGAUGAAAAUGUCU	58	7	848	2	8	13	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8580120-8580548	Cluster_3540	Pocillopora_meandrina_HIv1___Sc0000011	8580120	8580548	429	239	121	0.16736401673640167	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	29	2	210	1	4	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8581778-8582481	Cluster_3541	Pocillopora_meandrina_HIv1___Sc0000011	8581778	8582481	704	281	138	0.07473309608540925	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	31	2	265	0	5	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8622522-8623855	Cluster_3542	Pocillopora_meandrina_HIv1___Sc0000011	8622522	8623855	1334	2257	741	0.17678334071776694	-	UGGAUUACAAGUAAACACAACUGCCUGU	253	13	2000	8	24	136	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8632776-8633199	Cluster_3543	Pocillopora_meandrina_HIv1___Sc0000011	8632776	8633199	424	144	51	0.9027777777777778	+	UGGGUCGUAUUCCUAAAUCUUGAGCAA	20	9	118	1	1	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8759529-8759949	Cluster_3544	Pocillopora_meandrina_HIv1___Sc0000011	8759529	8759949	421	98	37	0.7857142857142857	.	UAUGCAUUGAACGGUAAGGGUAU	34	14	3	14	4	52	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8942245-8942671	Cluster_3545	Pocillopora_meandrina_HIv1___Sc0000011	8942245	8942671	427	790	83	0.056962025316455694	-	UUUCAAACUAAGGAAGGAGAAAGG	213	5	416	16	34	32	287	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8943032-8943461	Cluster_3546	Pocillopora_meandrina_HIv1___Sc0000011	8943032	8943461	430	1478	93	0.9837618403247632	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	748	7	1458	2	0	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8989631-8990060	Cluster_3547	Pocillopora_meandrina_HIv1___Sc0000011	8989631	8990060	430	91	24	0.03296703296703297	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	33	0	88	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9386857-9387285	Cluster_3548	Pocillopora_meandrina_HIv1___Sc0000011	9386857	9387285	429	2865	85	0.00034904013961605586	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2205	1	2862	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9637992-9638413	Cluster_3549	Pocillopora_meandrina_HIv1___Sc0000011	9637992	9638413	422	151	87	0.0	-	UCCAGCUAUGUGAUCUGAACUGAAAAGUUU	33	23	95	8	10	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9680438-9680859	Cluster_3550	Pocillopora_meandrina_HIv1___Sc0000011	9680438	9680859	422	176	119	0.7386363636363636	.	UAACACUAUAAACAUUCUGAGGGCGAUU	13	0	148	2	8	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9680873-9681301	Cluster_3551	Pocillopora_meandrina_HIv1___Sc0000011	9680873	9681301	429	189	102	0.8941798941798942	+	UGAACGUAUAGCCAUCCAGUUGAACUUG	15	0	182	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9711844-9712790	Cluster_3552	Pocillopora_meandrina_HIv1___Sc0000011	9711844	9712790	947	2097	688	0.08631378159275155	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	169	19	1965	17	8	32	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9712795-9713663	Cluster_3553	Pocillopora_meandrina_HIv1___Sc0000011	9712795	9713663	869	551	270	0.07259528130671507	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	26	3	528	3	1	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9713864-9715859	Cluster_3554	Pocillopora_meandrina_HIv1___Sc0000011	9713864	9715859	1996	3513	1150	0.05180757187588955	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	211	32	3265	19	19	70	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9739952-9741130	Cluster_3555	Pocillopora_meandrina_HIv1___Sc0000011	9739952	9741130	1179	1346	517	0.08841010401188708	-	UGUCACUUUGCCGAUGGCUUGACUCGUG	86	6	1220	14	16	55	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9742190-9742888	Cluster_3556	Pocillopora_meandrina_HIv1___Sc0000011	9742190	9742888	699	734	248	0.0340599455040872	-	UAGGACGCUCUACUCCCUCAGCAGUACGGU	64	4	683	1	5	5	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9743274-9744734	Cluster_3557	Pocillopora_meandrina_HIv1___Sc0000011	9743274	9744734	1461	3131	777	0.011178537208559566	-	UGACUUUGUACAGGACUGGACCCGUUUGUUC	209	33	3023	11	9	22	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9747736-9748158	Cluster_3558	Pocillopora_meandrina_HIv1___Sc0000011	9747736	9748158	423	527	40	0.9867172675521821	+	UGACUGUCGGUCAACUGUCGGC	211	10	4	10	305	198	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9786850-9788785	Cluster_3559	Pocillopora_meandrina_HIv1___Sc0000011	9786850	9788785	1936	8306	1797	0.046111244883216954	-	UGUGUGGUUUUUGUAAGAACUAAAAAGUUC	1694	115	7994	33	25	45	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9789366-9791702	Cluster_3560	Pocillopora_meandrina_HIv1___Sc0000011	9789366	9791702	2337	5821	2077	0.799862566569318	.	UCGUAGUAAACAUGGCUUCUUUUUAAAGA	203	117	5227	52	47	186	192	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9794038-9794468	Cluster_3561	Pocillopora_meandrina_HIv1___Sc0000011	9794038	9794468	431	151	15	0.006622516556291391	-	UGAGUAAACCUUCUUUUAAAUUUGAACAUU	69	0	151	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9794660-9795088	Cluster_3562	Pocillopora_meandrina_HIv1___Sc0000011	9794660	9795088	429	145	31	0.0	-	CACCAAAACAACGUAGCUCUUUUGCCAUC	85	0	144	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9806603-9807305	Cluster_3563	Pocillopora_meandrina_HIv1___Sc0000011	9806603	9807305	703	2727	305	0.7532086541987532	.	UGUGUUAGACUUUAACAGGAAAGAAUG	632	12	2678	12	7	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9807646-9808062	Cluster_3564	Pocillopora_meandrina_HIv1___Sc0000011	9807646	9808062	417	173	98	0.5722543352601156	.	AGAAAACGAAAGUGUGGUAGUGGAAGCCGU	7	6	157	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9808077-9808631	Cluster_3565	Pocillopora_meandrina_HIv1___Sc0000011	9808077	9808631	555	249	91	0.8433734939759037	+	UGGAAUGAAGUUUAUGCAGUCUGCUAGA	36	0	230	3	1	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9809548-9810654	Cluster_3566	Pocillopora_meandrina_HIv1___Sc0000011	9809548	9810654	1107	2485	455	0.9436619718309859	+	UGACUAUCAUCUGAAAGGGGCAAUUGGU	294	40	2355	6	24	32	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9825540-9826474	Cluster_3567	Pocillopora_meandrina_HIv1___Sc0000011	9825540	9826474	935	1136	412	0.14172535211267606	-	UCUGUCUCGUAUCAUCUCAUCUGUGAGC	79	11	1017	10	31	15	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9826662-9827089	Cluster_3568	Pocillopora_meandrina_HIv1___Sc0000011	9826662	9827089	428	261	140	0.05363984674329502	-	UCUUCUCCUUGACUUCCUUUUGUAGAGU	34	1	249	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9828072-9828840	Cluster_3569	Pocillopora_meandrina_HIv1___Sc0000011	9828072	9828840	769	464	196	0.0668103448275862	-	UGAUUCAUCAGUAUUAAUGACUGUAGU	66	10	431	2	5	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9836945-9837359	Cluster_3570	Pocillopora_meandrina_HIv1___Sc0000011	9836945	9837359	415	276	150	0.03260869565217391	-	UGACUGUGGAGCAUUGCUGAUAAUGUU	15	1	266	1	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9845259-9845688	Cluster_3571	Pocillopora_meandrina_HIv1___Sc0000011	9845259	9845688	430	215	74	0.0	-	UAUUCAAAGUAAUCUCUGGAGAAGACUGGC	58	2	212	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9847890-9848290	Cluster_3572	Pocillopora_meandrina_HIv1___Sc0000011	9847890	9848290	401	198	118	0.005050505050505051	-	UACGAACGAAAUCUGCGGCGCUAGCUC	16	3	194	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9848383-9848810	Cluster_3573	Pocillopora_meandrina_HIv1___Sc0000011	9848383	9848810	428	304	104	0.006578947368421052	-	UCAACGGUGCCACUCUGGACUUUCCUGU	50	0	299	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9849209-9849638	Cluster_3574	Pocillopora_meandrina_HIv1___Sc0000011	9849209	9849638	430	192	50	0.0	-	UGAAUUUGACGUUUGACUGCCUUGUUCAGC	116	2	188	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9861491-9862035	Cluster_3575	Pocillopora_meandrina_HIv1___Sc0000011	9861491	9862035	545	1615	356	0.7721362229102167	.	GAAAGAAUUAGAGAAUGGGCGUCGCAGG	145	42	1067	29	44	117	316	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9868640-9869320	Cluster_3576	Pocillopora_meandrina_HIv1___Sc0000011	9868640	9869320	681	326	160	0.901840490797546	+	UGAAUGAUGUUGUCGAGUAGAUUGAGAGU	26	7	299	2	10	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9869468-9869877	Cluster_3577	Pocillopora_meandrina_HIv1___Sc0000011	9869468	9869877	410	215	95	0.6558139534883721	.	UAAUAUCAGUUUCUGGUCAAGAUCAAGA	25	8	144	0	24	8	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9869941-9870460	Cluster_3578	Pocillopora_meandrina_HIv1___Sc0000011	9869941	9870460	520	524	212	0.9179389312977099	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	54	3	445	6	0	7	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9874015-9875090	Cluster_3579	Pocillopora_meandrina_HIv1___Sc0000011	9874015	9875090	1076	574	201	0.003484320557491289	-	UGCUUCCAGGAAACAGGCAGAAAAUAUGC	99	6	554	2	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9876546-9876963	Cluster_3580	Pocillopora_meandrina_HIv1___Sc0000011	9876546	9876963	418	340	98	0.0	-	AUCCCACUUCUGACACCA	190	258	73	0	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9881499-9882549	Cluster_3581	Pocillopora_meandrina_HIv1___Sc0000011	9881499	9882549	1051	860	412	0.022093023255813953	-	UACUUUUCCAGGCGUCUAGGUCAAACUU	43	27	800	5	6	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9883183-9883608	Cluster_3582	Pocillopora_meandrina_HIv1___Sc0000011	9883183	9883608	426	175	87	0.0	-	UGCAGAAUCCUGAGCAAUAUUGUCUU	36	1	166	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10071736-10072156	Cluster_3583	Pocillopora_meandrina_HIv1___Sc0000011	10071736	10072156	421	155	100	0.03225806451612903	-	AUGUGAAGCAAGGAUCAUGAAGACU	16	26	80	16	3	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10082662-10083084	Cluster_3584	Pocillopora_meandrina_HIv1___Sc0000011	10082662	10083084	423	74	23	1.0	+	CACGGAUUGUUGUGUCUCUAGCUG	10	0	46	0	4	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10238979-10239401	Cluster_3585	Pocillopora_meandrina_HIv1___Sc0000011	10238979	10239401	423	169	41	0.9349112426035503	+	AUGAAAAUACGUAAUGCAGCUC	26	10	1	14	85	47	12	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10250224-10250643	Cluster_3586	Pocillopora_meandrina_HIv1___Sc0000011	10250224	10250643	420	1759	9	1.0	+	GAAGUUCUGGUUUAAAAAA	783	1758	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10323711-10326083	Cluster_3587	Pocillopora_meandrina_HIv1___Sc0000011	10323711	10326083	2373	18738	2706	0.994396413704771	+	UGUGUAACUUAUCGUAUCCUGGUUGUCC	2670	113	18124	40	140	182	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10437910-10438799	Cluster_3588	Pocillopora_meandrina_HIv1___Sc0000011	10437910	10438799	890	554	380	0.9981949458483754	+	AACUUGUGAAUUAAUUGAAUGAUU	21	108	225	48	43	51	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10442828-10443451	Cluster_3589	Pocillopora_meandrina_HIv1___Sc0000011	10442828	10443451	624	1103	280	0.10154125113327289	-	UAAGAUUCCAAGAUAUUUAAAACAAGU	99	10	964	3	16	12	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:125343-125768	Cluster_3590	Pocillopora_meandrina_HIv1___Sc0000012	125343	125768	426	206	94	0.04854368932038835	-	UGUGAAUCUUUUUACUCGUUAUGUUAAGU	17	4	191	3	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:126609-127033	Cluster_3591	Pocillopora_meandrina_HIv1___Sc0000012	126609	127033	425	122	47	1.0	+	UUGAAUGUUUCAGCUGUUGAUAAGAGCACU	20	4	103	1	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:127941-128369	Cluster_3592	Pocillopora_meandrina_HIv1___Sc0000012	127941	128369	429	117	17	1.0	+	GUGCGAGAUAAGAUCUCUGAAGAUGACAGG	46	0	111	0	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:241078-241499	Cluster_3593	Pocillopora_meandrina_HIv1___Sc0000012	241078	241499	422	164	115	0.9939024390243902	+	AAAGAAAUGAUUGAUCUUGUUCUGGACA	9	43	85	7	12	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:429014-429511	Cluster_3594	Pocillopora_meandrina_HIv1___Sc0000012	429014	429511	498	718	106	0.009749303621169917	-	CGAUCCAACAAGAACAAUAUGUGCUUACUA	153	4	694	2	3	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:694963-695392	Cluster_3595	Pocillopora_meandrina_HIv1___Sc0000012	694963	695392	430	515	88	0.9728155339805825	+	UGCGUAGCUCAACACGAUUUCGUCAAAGGA	94	3	498	0	0	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:697287-697703	Cluster_3596	Pocillopora_meandrina_HIv1___Sc0000012	697287	697703	417	99	30	1.0	+	UGAUAACUUUAAGACGUUCCAACCUUUGG	22	0	98	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:879109-879525	Cluster_3597	Pocillopora_meandrina_HIv1___Sc0000012	879109	879525	417	128	84	0.0	-	UUAGACAGUAUGCUAAAGACA	5	30	56	12	4	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:934758-935175	Cluster_3598	Pocillopora_meandrina_HIv1___Sc0000012	934758	935175	418	116	14	0.06896551724137931	-	UUGAACUCGACCCUGUCA	90	109	3	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1127321-1127875	Cluster_3599	Pocillopora_meandrina_HIv1___Sc0000012	1127321	1127875	555	630	300	0.10317460317460317	-	UAAUGAAGUCGUAAUUUGUCCAUCC	80	6	585	2	12	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1128545-1128965	Cluster_3600	Pocillopora_meandrina_HIv1___Sc0000012	1128545	1128965	421	190	94	0.02631578947368421	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	33	0	180	3	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1129185-1129616	Cluster_3601	Pocillopora_meandrina_HIv1___Sc0000012	1129185	1129616	432	295	106	0.0576271186440678	-	UACGUGUAGAAAGCCUUCUCUGACAUC	40	3	274	0	3	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1495883-1496342	Cluster_3602	Pocillopora_meandrina_HIv1___Sc0000012	1495883	1496342	460	560	174	0.0	-	CAGACAGAUACGGAGCUUACAGAU	53	111	152	33	107	51	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1574026-1575844	Cluster_3603	Pocillopora_meandrina_HIv1___Sc0000012	1574026	1575844	1819	1465	641	0.9706484641638226	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	93	13	1394	5	6	22	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1576712-1577156	Cluster_3604	Pocillopora_meandrina_HIv1___Sc0000012	1576712	1577156	445	967	328	0.9431230610134437	+	UGUUGCUCAAAGGUCUUACUAUACACCA	80	70	792	53	27	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1577214-1578262	Cluster_3605	Pocillopora_meandrina_HIv1___Sc0000012	1577214	1578262	1049	1196	464	0.9506688963210702	+	UCUUGCCGUAGCAUUUCGUGGACGAUCA	120	24	1111	8	6	27	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1578389-1579986	Cluster_3606	Pocillopora_meandrina_HIv1___Sc0000012	1578389	1579986	1598	2051	938	0.8469039492930278	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	122	25	1864	20	16	41	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1651624-1652045	Cluster_3607	Pocillopora_meandrina_HIv1___Sc0000012	1651624	1652045	422	83	26	1.0	+	UCUGUAAACUCCGUAUUUAACAACAAAU	10	0	80	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1700342-1700764	Cluster_3608	Pocillopora_meandrina_HIv1___Sc0000012	1700342	1700764	423	210	95	0.8333333333333334	+	UUUUGUAUCUGGAUUCCUUGACAUCU	17	3	197	1	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1700990-1701402	Cluster_3609	Pocillopora_meandrina_HIv1___Sc0000012	1700990	1701402	413	148	87	0.1891891891891892	-	GUGGAGCUAAAAGAAGGAACAACAGUUGAC	11	2	122	3	1	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1720627-1721056	Cluster_3610	Pocillopora_meandrina_HIv1___Sc0000012	1720627	1721056	430	101	30	0.9900990099009901	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	27	0	98	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1778902-1779428	Cluster_3611	Pocillopora_meandrina_HIv1___Sc0000012	1778902	1779428	527	1012	266	0.808300395256917	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	138	10	850	3	16	77	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1813691-1814109	Cluster_3612	Pocillopora_meandrina_HIv1___Sc0000012	1813691	1814109	419	228	8	0.013157894736842105	-	AACUUUUGACGGUGUCUAU	215	228	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2637212-2637903	Cluster_3613	Pocillopora_meandrina_HIv1___Sc0000012	2637212	2637903	692	898	507	0.9922048997772829	+	CCUGUGUGUGCUCAGACA	28	240	335	91	80	72	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2807434-2807851	Cluster_3614	Pocillopora_meandrina_HIv1___Sc0000012	2807434	2807851	418	111	11	0.972972972972973	+	GAAACAUGCUCUGAGCUC	53	107	3	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2886188-2886621	Cluster_3615	Pocillopora_meandrina_HIv1___Sc0000012	2886188	2886621	434	1361	244	0.0	-	AUUAACUGAAGACACCUGUAACUCUGAAU	246	85	1028	16	120	54	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2886971-2887446	Cluster_3616	Pocillopora_meandrina_HIv1___Sc0000012	2886971	2887446	476	2038	303	0.0	-	UGGAAUGAUGAGUCACUCUUUGAUA	256	290	1438	161	87	22	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2889479-2889955	Cluster_3617	Pocillopora_meandrina_HIv1___Sc0000012	2889479	2889955	477	2316	339	0.0	-	UUAACUGAAGACACCUUUUACUCUGAAU	348	113	1836	49	162	65	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2926923-2927342	Cluster_3618	Pocillopora_meandrina_HIv1___Sc0000012	2926923	2927342	420	165	55	0.18181818181818182	-	GGGCCUGUUUCGUGAAUCGC	38	106	13	27	12	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3102775-3103192	Cluster_3619	Pocillopora_meandrina_HIv1___Sc0000012	3102775	3103192	418	196	108	1.0	+	AGUGUUGCUGAACGAAAAAGGAA	11	54	78	19	19	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3291569-3291996	Cluster_3620	Pocillopora_meandrina_HIv1___Sc0000012	3291569	3291996	428	179	70	0.4022346368715084	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	40	0	168	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3301242-3301665	Cluster_3621	Pocillopora_meandrina_HIv1___Sc0000012	3301242	3301665	424	180	119	0.7666666666666667	.	UUAACACUAUAAACAUUCUGAGGGCGAU	11	2	153	5	5	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3301677-3302105	Cluster_3622	Pocillopora_meandrina_HIv1___Sc0000012	3301677	3302105	429	174	94	0.8908045977011494	+	UGAACGUAUAGCCAUCCAGUUGAACUUG	12	1	164	0	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3417269-3417875	Cluster_3623	Pocillopora_meandrina_HIv1___Sc0000012	3417269	3417875	607	780	155	0.9115384615384615	+	UGGUAAAAUUCUGUUCAAAGU	100	10	569	144	15	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3443230-3443876	Cluster_3624	Pocillopora_meandrina_HIv1___Sc0000012	3443230	3443876	647	735	295	0.11156462585034013	-	UGAAAUACUUGUUCUUUUCCCUGGUUUGCC	84	4	692	5	8	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3443902-3444331	Cluster_3625	Pocillopora_meandrina_HIv1___Sc0000012	3443902	3444331	430	714	71	0.0	-	UCAGCUCUUUCUAACUCUGCAAUUUGAGGU	282	0	713	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3549634-3550060	Cluster_3626	Pocillopora_meandrina_HIv1___Sc0000012	3549634	3550060	427	140	41	0.9571428571428572	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	1	138	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3702104-3702532	Cluster_3627	Pocillopora_meandrina_HIv1___Sc0000012	3702104	3702532	429	91	24	0.01098901098901099	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	24	0	89	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3943389-3943815	Cluster_3628	Pocillopora_meandrina_HIv1___Sc0000012	3943389	3943815	427	75	17	0.05333333333333334	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	28	0	74	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4244144-4244572	Cluster_3629	Pocillopora_meandrina_HIv1___Sc0000012	4244144	4244572	429	109	20	0.009174311926605505	-	GAAGAUUUCUUUGAGAUAGAUGUAGCACA	39	1	104	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4299145-4299601	Cluster_3630	Pocillopora_meandrina_HIv1___Sc0000012	4299145	4299601	457	2540	174	1.0	+	UAUUUGUACAUCGCUGACUUGUUU	543	85	718	20	107	571	1039	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4477901-4478318	Cluster_3631	Pocillopora_meandrina_HIv1___Sc0000012	4477901	4478318	418	731	21	0.0	-	GGAAUCGGCCGUGGAUUA	518	731	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4527319-4527728	Cluster_3632	Pocillopora_meandrina_HIv1___Sc0000012	4527319	4527728	410	130	83	0.46923076923076923	.	CUCGCGUCUGAAGCUGUUAGAGU	15	40	19	17	20	26	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4527933-4528396	Cluster_3633	Pocillopora_meandrina_HIv1___Sc0000012	4527933	4528396	464	296	177	0.5540540540540541	.	UUCGCGUCUGAAGCUGUUAA	28	135	77	49	23	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4724333-4724835	Cluster_3634	Pocillopora_meandrina_HIv1___Sc0000012	4724333	4724835	503	412	170	0.9927184466019418	+	UUCUACUGCUGUAACUUCAUGAAUACUGC	38	4	398	0	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4724871-4725616	Cluster_3635	Pocillopora_meandrina_HIv1___Sc0000012	4724871	4725616	746	658	259	0.9969604863221885	+	UAAGUGCUUUUUCCGACUAACUUUUCUGU	44	12	623	9	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4908638-4909067	Cluster_3636	Pocillopora_meandrina_HIv1___Sc0000012	4908638	4909067	430	297	36	0.0	-	AUACUCUAGCAUUCAGACGGAAGAUUCGCU	129	9	279	5	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4929534-4929951	Cluster_3637	Pocillopora_meandrina_HIv1___Sc0000012	4929534	4929951	418	82	9	0.975609756097561	+	CGGCCUGAAAAAAAAAAA	41	76	0	4	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5242362-5242790	Cluster_3638	Pocillopora_meandrina_HIv1___Sc0000012	5242362	5242790	429	121	31	1.0	+	UGCAUAUCUUGAACUAGUCGGUUGUGAUU	70	0	118	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5269393-5269870	Cluster_3639	Pocillopora_meandrina_HIv1___Sc0000012	5269393	5269870	478	493	306	0.02231237322515213	-	GUUCGAUUCCGGAGAGGGAGCCG	37	104	158	56	60	75	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5275572-5276710	Cluster_3640	Pocillopora_meandrina_HIv1___Sc0000012	5275572	5276710	1139	12397	2188	0.0012906348310075019	-	CUAGUACUGUGAAACUGCGAAUGGCU	885	2422	5562	899	885	938	1691	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5279849-5281602	Cluster_3641	Pocillopora_meandrina_HIv1___Sc0000012	5279849	5281602	1754	1055789	21098	6.91426033042587e-05	-	CAGCUGUGACCCUCGGGU	218260	693106	212081	79893	40216	18097	12396	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5282066-5282613	Cluster_3642	Pocillopora_meandrina_HIv1___Sc0000012	5282066	5282613	548	1299	142	0.05003849114703618	-	UCAUUCACAUCCAUCUGUAAGAAUUUGC	218	8	1204	1	2	3	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5295733-5297102	Cluster_3643	Pocillopora_meandrina_HIv1___Sc0000012	5295733	5297102	1370	6141968	42044	3.305129561078794e-05	-	CUCGGGCUGAGACUUGAAGCA	1189262	1631270	1074882	1917617	385504	1027464	105231	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5299291-5303737	Cluster_3644	Pocillopora_meandrina_HIv1___Sc0000012	5299291	5303737	4447	793703	70138	0.9994179182893349	+	AACUUUUGACGGUGGAUCU	17352	229855	329510	66360	61548	54137	52293	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5461908-5462338	Cluster_3645	Pocillopora_meandrina_HIv1___Sc0000012	5461908	5462338	431	115	42	0.9565217391304348	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	36	0	114	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5463579-5464005	Cluster_3646	Pocillopora_meandrina_HIv1___Sc0000012	5463579	5464005	427	224	145	0.8571428571428571	+	UGAGUCGAGGUUAUUCACAAUACGAGC	27	7	193	1	3	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5507216-5507668	Cluster_3647	Pocillopora_meandrina_HIv1___Sc0000012	5507216	5507668	453	601	53	0.8835274542429284	+	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	381	0	592	0	0	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5578524-5578951	Cluster_3648	Pocillopora_meandrina_HIv1___Sc0000012	5578524	5578951	428	127	52	0.08661417322834646	-	AAGGAUACCACAUUCGGAAGUGUAAGAGA	40	7	107	1	0	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5579115-5579537	Cluster_3649	Pocillopora_meandrina_HIv1___Sc0000012	5579115	5579537	423	86	36	0.32558139534883723	.	UUGUACCGGUCCAUAUGUCAACUGUUG	11	1	84	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5605812-5606228	Cluster_3650	Pocillopora_meandrina_HIv1___Sc0000012	5605812	5606228	417	246	142	0.7845528455284553	.	UAUGACCGUUUGAAUCAGCACAUGUACGAGC	13	70	130	34	8	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5739796-5740215	Cluster_3651	Pocillopora_meandrina_HIv1___Sc0000012	5739796	5740215	420	411	36	1.0	+	CUCGGGCUGAGACUUGACCU	85	394	0	17	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5868872-5869355	Cluster_3652	Pocillopora_meandrina_HIv1___Sc0000012	5868872	5869355	484	245	112	0.926530612244898	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	24	14	179	6	3	17	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6081718-6082147	Cluster_3653	Pocillopora_meandrina_HIv1___Sc0000012	6081718	6082147	430	181	72	0.027624309392265192	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGU	44	1	177	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6088634-6089062	Cluster_3654	Pocillopora_meandrina_HIv1___Sc0000012	6088634	6089062	429	162	40	0.9938271604938271	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	1	160	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6098305-6100303	Cluster_3655	Pocillopora_meandrina_HIv1___Sc0000012	6098305	6100303	1999	4078	1405	0.1032368808239333	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	385	30	3816	23	27	50	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6100310-6100737	Cluster_3656	Pocillopora_meandrina_HIv1___Sc0000012	6100310	6100737	428	358	160	0.1340782122905028	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	56	4	334	0	2	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6100855-6101281	Cluster_3657	Pocillopora_meandrina_HIv1___Sc0000012	6100855	6101281	427	228	94	0.06578947368421052	-	UGAACUUCUCGGCUCCAAACACUAUGG	74	0	211	0	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6101297-6101728	Cluster_3658	Pocillopora_meandrina_HIv1___Sc0000012	6101297	6101728	432	499	195	0.056112224448897796	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	66	3	469	4	2	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6102014-6103188	Cluster_3659	Pocillopora_meandrina_HIv1___Sc0000012	6102014	6103188	1175	1222	444	0.060556464811783964	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	156	32	1098	10	16	28	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6137887-6138307	Cluster_3660	Pocillopora_meandrina_HIv1___Sc0000012	6137887	6138307	421	166	66	0.9819277108433735	+	UACUUAACGUUGGCAGUACUG	41	6	89	65	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6183151-6183691	Cluster_3661	Pocillopora_meandrina_HIv1___Sc0000012	6183151	6183691	541	603	149	0.23383084577114427	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	187	1	577	3	0	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6342093-6342496	Cluster_3662	Pocillopora_meandrina_HIv1___Sc0000012	6342093	6342496	404	103	76	0.0	-	CUAGUGUGAACUGAGACGGU	3	25	48	10	9	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6455183-6455276	Cluster_3663	Pocillopora_meandrina_HIv1___Sc0000012	6455183	6455276	94	2416	125	1.0	+	UGAAAUACUCUGACGGAGUCAGC	1099	308	151	42	196	1432	287	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000012:6591857-6592296	Cluster_3664	Pocillopora_meandrina_HIv1___Sc0000012	6591857	6592296	440	2371	173	0.0	-	UCUGUUAGAAUGAAGAAAGGGACUCCGUC	401	23	2281	8	14	16	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6610946-6611372	Cluster_3665	Pocillopora_meandrina_HIv1___Sc0000012	6610946	6611372	427	178	51	0.30337078651685395	.	CGUGUUUGGAUUGCGAUCACCUGGAGCA	27	2	164	1	1	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6715855-6716285	Cluster_3666	Pocillopora_meandrina_HIv1___Sc0000012	6715855	6716285	431	315	105	0.10793650793650794	-	UACUUCUUGUGACAUUGAAAUGGAUUCCA	35	28	284	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6743354-6743999	Cluster_3667	Pocillopora_meandrina_HIv1___Sc0000012	6743354	6743999	646	3533	529	0.23577696009057458	.	GUGAUUUUCAGUUCAGGACAAUGCAAUUUU	430	50	2805	17	45	81	535	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6750710-6751473	Cluster_3668	Pocillopora_meandrina_HIv1___Sc0000012	6750710	6751473	764	1555	204	0.3337620578778135	.	UGAGAAAAAUGUGACAUGAGAAAUUGAUU	570	56	1390	1	10	20	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6939591-6940020	Cluster_3669	Pocillopora_meandrina_HIv1___Sc0000012	6939591	6940020	430	429	41	0.002331002331002331	-	AACUACUGCUCGUGCUCUAGAUAUGACG	147	18	408	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6963867-6964294	Cluster_3670	Pocillopora_meandrina_HIv1___Sc0000012	6963867	6964294	428	210	37	0.0380952380952381	-	AACUACUGCUCGUGCUCUAGAUAUGACA	105	4	201	1	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6972502-6972930	Cluster_3671	Pocillopora_meandrina_HIv1___Sc0000012	6972502	6972930	429	343	56	0.15160349854227406	-	AGGGACUGAAACAUCGACUGAAGACG	94	3	286	16	0	12	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6988644-6989900	Cluster_3672	Pocillopora_meandrina_HIv1___Sc0000012	6988644	6989900	1257	5188	1340	0.2679259830377795	.	UGUUGUCGAUUAGCUUUGGUACACAGUU	205	55	4445	34	313	130	211	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7218635-7219064	Cluster_3673	Pocillopora_meandrina_HIv1___Sc0000012	7218635	7219064	430	144	48	0.013888888888888888	-	UGAAUAGCAUAACUGAUGAACUACGUG	21	1	142	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7535780-7536207	Cluster_3674	Pocillopora_meandrina_HIv1___Sc0000012	7535780	7536207	428	137	46	0.0	-	UUUGAUCCGUCUUCGCAUGAAAUGCUGC	42	7	123	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7549463-7549893	Cluster_3675	Pocillopora_meandrina_HIv1___Sc0000012	7549463	7549893	431	2592	137	0.00038580246913580245	-	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	702	6	2583	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7556167-7556582	Cluster_3676	Pocillopora_meandrina_HIv1___Sc0000012	7556167	7556582	416	123	68	1.0	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	12	0	111	0	6	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7556645-7559193	Cluster_3677	Pocillopora_meandrina_HIv1___Sc0000012	7556645	7559193	2549	6537	2035	0.9178522257916475	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	270	85	5918	40	59	204	231	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7787967-7788385	Cluster_3678	Pocillopora_meandrina_HIv1___Sc0000012	7787967	7788385	419	218	68	0.0779816513761468	-	UUGGGUACUGGUGCACUGG	90	94	95	4	2	23	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7917423-7917838	Cluster_3679	Pocillopora_meandrina_HIv1___Sc0000012	7917423	7917838	416	140	71	0.5714285714285714	.	UCUUGAUUCAAGUAGGCUUAACA	41	3	84	0	1	50	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7919105-7919763	Cluster_3680	Pocillopora_meandrina_HIv1___Sc0000012	7919105	7919763	659	1909	443	0.14614981665793608	-	UGUGUAGUUCUUCCUAAGACUUUCGUC	141	12	1752	23	13	29	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7920052-7920756	Cluster_3681	Pocillopora_meandrina_HIv1___Sc0000012	7920052	7920756	705	3561	509	0.06178039876439202	-	UGCAAUGGAUCUAGUACUAUCAAGUUC	764	25	3335	20	68	23	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7921185-7921614	Cluster_3682	Pocillopora_meandrina_HIv1___Sc0000012	7921185	7921614	430	793	154	0.9684741488020177	+	UAGUACUGGUGAUUUCUGUUAAUGG	168	2	746	4	11	18	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7922225-7922758	Cluster_3683	Pocillopora_meandrina_HIv1___Sc0000012	7922225	7922758	534	5062	288	0.9946661398656658	+	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	2906	8	4987	9	10	14	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8079060-8079487	Cluster_3684	Pocillopora_meandrina_HIv1___Sc0000012	8079060	8079487	428	247	93	0.12550607287449392	-	UAUGACCGUUUGAAUCAGCCCAUGUACG	68	36	199	7	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8302326-8302754	Cluster_3685	Pocillopora_meandrina_HIv1___Sc0000012	8302326	8302754	429	81	21	0.012345679012345678	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	20	0	79	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8477056-8477461	Cluster_3686	Pocillopora_meandrina_HIv1___Sc0000012	8477056	8477461	406	146	120	0.0	-	CGACUAGUGUGAGUACACCAUU	3	40	57	14	10	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8592535-8592957	Cluster_3687	Pocillopora_meandrina_HIv1___Sc0000012	8592535	8592957	423	114	68	0.05263157894736842	-	AAUGGGAAAACGAGGACAGCGUGA	13	6	73	2	1	10	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8593071-8594026	Cluster_3688	Pocillopora_meandrina_HIv1___Sc0000012	8593071	8594026	956	3244	301	0.010789149198520346	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	1166	5	3139	2	4	29	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8669892-8670347	Cluster_3689	Pocillopora_meandrina_HIv1___Sc0000012	8669892	8670347	456	218	97	0.9678899082568807	+	UGAGAGAGCUGCUGAGUGCAAAAAGUACUUC	51	10	201	2	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8678382-8678810	Cluster_3690	Pocillopora_meandrina_HIv1___Sc0000012	8678382	8678810	429	164	79	1.0	+	UGCUACAAAAAAGGACGUGUUGAGCAGGC	22	1	162	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8680468-8680897	Cluster_3691	Pocillopora_meandrina_HIv1___Sc0000012	8680468	8680897	430	264	126	1.0	+	UGCUCUUGUCUUGGAUGUAAGUGCCUAACA	29	2	258	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8684119-8684548	Cluster_3692	Pocillopora_meandrina_HIv1___Sc0000012	8684119	8684548	430	334	110	1.0	+	UGACAUCGACAUAAGACAUAGAAAAAUGCG	86	0	324	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8702728-8703537	Cluster_3693	Pocillopora_meandrina_HIv1___Sc0000012	8702728	8703537	810	1632	259	0.9981617647058824	+	UACAUAGCCUUGAGGGUUGCAUUGCUCCACA	347	9	1535	2	1	74	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8706679-8707249	Cluster_3694	Pocillopora_meandrina_HIv1___Sc0000012	8706679	8707249	571	40251	560	0.9974907455715386	+	UUGUCUACAAGAAGCCUGUCCAUUUUGU	26970	42	39819	18	38	44	290	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8707330-8707985	Cluster_3695	Pocillopora_meandrina_HIv1___Sc0000012	8707330	8707985	656	1898	389	0.976290832455216	+	UUUUCCCAUUGAACUACAAUAAAACCCAUC	191	82	1744	26	11	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8709379-8709804	Cluster_3696	Pocillopora_meandrina_HIv1___Sc0000012	8709379	8709804	426	186	80	1.0	+	UGUUGAUUGCUUGACCACUGAGUUGA	49	2	165	7	0	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8715359-8715788	Cluster_3697	Pocillopora_meandrina_HIv1___Sc0000012	8715359	8715788	430	97	30	0.9896907216494846	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	27	1	93	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8718444-8718871	Cluster_3698	Pocillopora_meandrina_HIv1___Sc0000012	8718444	8718871	428	227	131	0.8370044052863436	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	12	2	214	1	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8718887-8719317	Cluster_3699	Pocillopora_meandrina_HIv1___Sc0000012	8718887	8719317	431	329	150	0.9422492401215805	+	UGAUAACUGUACUCUUGAAAUUCAUCG	21	1	317	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8721572-8722739	Cluster_3700	Pocillopora_meandrina_HIv1___Sc0000012	8721572	8722739	1168	3223	966	0.4834005584858827	.	UGCAUUAUGUCAAAUUUAGAUUCAUCU	213	43	2901	18	27	80	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8726442-8727520	Cluster_3701	Pocillopora_meandrina_HIv1___Sc0000012	8726442	8727520	1079	3953	917	0.8803440424993676	+	UUGGUAACAGUGUGGUGGAGAACGUGAUU	140	33	3755	25	26	45	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8729518-8730305	Cluster_3702	Pocillopora_meandrina_HIv1___Sc0000012	8729518	8730305	788	393	149	0.9720101781170484	+	UCGGUAACUAAACGGUCAAAAUUAUACUUU	85	2	377	3	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8731310-8731729	Cluster_3703	Pocillopora_meandrina_HIv1___Sc0000012	8731310	8731729	420	103	34	0.9902912621359223	+	UGAUCUUUGCAAUGACGUUGUGACUGAAAA	21	1	99	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8752386-8752974	Cluster_3704	Pocillopora_meandrina_HIv1___Sc0000012	8752386	8752974	589	7165	556	0.6628053035589672	.	UACGUCUGGCCAGCAAUCAACAUCGUC	1568	234	5907	98	25	40	861	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8753728-8754289	Cluster_3705	Pocillopora_meandrina_HIv1___Sc0000012	8753728	8754289	562	362	101	0.994475138121547	+	UAGGUAGUAACGACUGAAAAAAUUCCCU	51	25	329	3	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8759693-8760122	Cluster_3706	Pocillopora_meandrina_HIv1___Sc0000012	8759693	8760122	430	295	113	1.0	+	UGAGCAAGUAACAAAAUCGUUUUGUGGAUU	73	1	280	0	7	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8760474-8760900	Cluster_3707	Pocillopora_meandrina_HIv1___Sc0000012	8760474	8760900	427	345	86	0.8492753623188406	+	UCUGUUUCCAUUGUAUUGAGAGUCUCA	158	8	333	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8762436-8762904	Cluster_3708	Pocillopora_meandrina_HIv1___Sc0000012	8762436	8762904	469	638	217	0.8275862068965517	+	UCUUUCGAUCUUCGUCAAACGAACCCGUU	217	95	461	52	19	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8769961-8770387	Cluster_3709	Pocillopora_meandrina_HIv1___Sc0000012	8769961	8770387	427	258	124	0.9341085271317829	+	UGAUUCAUCAGUAUUAAUGACUGUAGU	57	5	230	2	2	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8770560-8770965	Cluster_3710	Pocillopora_meandrina_HIv1___Sc0000012	8770560	8770965	406	308	182	0.6525974025974026	.	AUGCUUAUAAAACUGACAGAACAAUGGAGA	18	6	263	5	8	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8771212-8771612	Cluster_3711	Pocillopora_meandrina_HIv1___Sc0000012	8771212	8771612	401	124	90	0.8629032258064516	+	UGCGAGUGGCUACUUUGAAUAAUUUAAA	5	0	119	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8771991-8772496	Cluster_3712	Pocillopora_meandrina_HIv1___Sc0000012	8771991	8772496	506	586	229	0.7389078498293515	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	71	13	522	3	4	12	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8783229-8784507	Cluster_3713	Pocillopora_meandrina_HIv1___Sc0000012	8783229	8784507	1279	3981	1353	0.29490077869881937	.	UUAACCAUGUCGAAACGUAUCAGCAGUG	151	79	3481	60	32	65	264	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8785059-8786838	Cluster_3714	Pocillopora_meandrina_HIv1___Sc0000012	8785059	8786838	1780	3222	1179	0.7545003103662321	.	AGGUGUAGAAUGUAAAAAGCAGCU	167	22	2716	34	34	85	331	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8791402-8791892	Cluster_3715	Pocillopora_meandrina_HIv1___Sc0000012	8791402	8791892	491	443	162	0.6433408577878104	.	GAAUCGGCCGUGGAA	36	153	274	0	3	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8794216-8794640	Cluster_3716	Pocillopora_meandrina_HIv1___Sc0000012	8794216	8794640	425	75	24	1.0	+	UGAUAGUAGUGCAAAGACAUGUGUUGGUG	17	0	74	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8806252-8807057	Cluster_3717	Pocillopora_meandrina_HIv1___Sc0000012	8806252	8807057	806	3244	746	0.8921085080147966	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	341	12	3059	13	13	26	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8807244-8810155	Cluster_3718	Pocillopora_meandrina_HIv1___Sc0000012	8807244	8810155	2912	14322	2886	0.8711073872364195	+	UGAUCGAUAGUUUCGCUCUGGAGUUGUG	1276	94	13499	49	63	229	388	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8827926-8828910	Cluster_3719	Pocillopora_meandrina_HIv1___Sc0000012	8827926	8828910	985	1316	213	0.9878419452887538	+	UGUCACACUUUGAACACACAAAAAAGGA	305	140	1125	11	9	1	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9075476-9076776	Cluster_3720	Pocillopora_meandrina_HIv1___Sc0000012	9075476	9076776	1301	1352	616	0.9874260355029586	+	UGCUUUCUGUUCUCUUGUUCUCCAACA	50	8	1280	7	10	14	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9076968-9077377	Cluster_3721	Pocillopora_meandrina_HIv1___Sc0000012	9076968	9077377	410	168	101	0.4226190476190476	.	ACUGGAUACAAAACUGCUCGAUGC	20	1	116	0	2	7	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9077455-9078199	Cluster_3722	Pocillopora_meandrina_HIv1___Sc0000012	9077455	9078199	745	338	156	0.047337278106508875	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	60	2	325	1	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9079951-9081503	Cluster_3723	Pocillopora_meandrina_HIv1___Sc0000012	9079951	9081503	1553	10894	1825	0.9848540480998715	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1325	53	10509	33	43	85	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9092664-9093073	Cluster_3724	Pocillopora_meandrina_HIv1___Sc0000012	9092664	9093073	410	89	21	0.7303370786516854	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	39	1	86	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9102736-9104308	Cluster_3725	Pocillopora_meandrina_HIv1___Sc0000012	9102736	9104308	1573	2233	950	0.9278996865203761	+	UAGGAUCAUAGUCUUUGAACUCCGACGG	77	23	2024	13	10	93	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9104863-9105713	Cluster_3726	Pocillopora_meandrina_HIv1___Sc0000012	9104863	9105713	851	1649	524	0.8896300788356579	+	UGAUUUAUAGGAGUAAUGAGACAUUAU	146	23	1515	19	28	15	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9109032-9110534	Cluster_3727	Pocillopora_meandrina_HIv1___Sc0000012	9109032	9110534	1503	1692	731	0.9645390070921985	+	UGAUUUCCUCUCUGACAUCUAAAGGU	47	13	1579	13	24	24	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9110815-9111244	Cluster_3728	Pocillopora_meandrina_HIv1___Sc0000012	9110815	9111244	430	692	193	0.9797687861271677	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	173	3	672	1	4	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9111596-9112011	Cluster_3729	Pocillopora_meandrina_HIv1___Sc0000012	9111596	9112011	416	170	111	0.9	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	18	1	158	2	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9112220-9113011	Cluster_3730	Pocillopora_meandrina_HIv1___Sc0000012	9112220	9113011	792	1073	421	0.7958993476234856	.	UGCUCAAAACGUUCUACUCCGAAAAGUAU	41	16	905	7	12	70	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9113299-9113734	Cluster_3731	Pocillopora_meandrina_HIv1___Sc0000012	9113299	9113734	436	198	73	0.9494949494949495	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	36	0	185	0	1	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9114316-9114858	Cluster_3732	Pocillopora_meandrina_HIv1___Sc0000012	9114316	9114858	543	873	365	0.8350515463917526	+	UCUAUCACUUUGUCGAUGUCGGUUUUCUC	39	23	735	13	10	21	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9115123-9115523	Cluster_3733	Pocillopora_meandrina_HIv1___Sc0000012	9115123	9115523	401	141	85	0.8439716312056738	+	UGAGCUGAAGUAAAGAAUUCCAUAGACCAA	12	5	127	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9116932-9118951	Cluster_3734	Pocillopora_meandrina_HIv1___Sc0000012	9116932	9118951	2020	2973	1126	0.9653548604103599	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	81	21	2827	8	30	37	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9119216-9120301	Cluster_3735	Pocillopora_meandrina_HIv1___Sc0000012	9119216	9120301	1086	6454	566	0.9259374031608305	+	UCAUAGAGUUUAAGACAAGCCCAACAGGUC	2436	62	6120	38	127	48	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9126640-9127054	Cluster_3736	Pocillopora_meandrina_HIv1___Sc0000012	9126640	9127054	415	247	138	0.979757085020243	+	UCUCUAACUCGUCGUCUGCUUCAUCAGC	23	4	234	3	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9127123-9127835	Cluster_3737	Pocillopora_meandrina_HIv1___Sc0000012	9127123	9127835	713	1030	191	0.9941747572815534	+	UUAUAACCGAGUGUGCCUUAUAACCGAAU	198	3	1017	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9153751-9154840	Cluster_3738	Pocillopora_meandrina_HIv1___Sc0000012	9153751	9154840	1090	5024	1046	0.9082404458598726	+	UCAUCGACAUGCCUUGACUUUGAGCAGU	655	49	4784	23	19	49	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9192779-9193208	Cluster_3739	Pocillopora_meandrina_HIv1___Sc0000012	9192779	9193208	430	327	73	0.0030581039755351682	-	UACUCCGACACUCCGAUAUGUGAUACUAC	92	2	322	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9311500-9311918	Cluster_3740	Pocillopora_meandrina_HIv1___Sc0000012	9311500	9311918	419	131	75	0.007633587786259542	-	CCCAAACUGUAUGUGAAGCUUCA	26	38	25	8	14	35	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9312883-9313417	Cluster_3741	Pocillopora_meandrina_HIv1___Sc0000012	9312883	9313417	535	311	159	0.0	-	AAUAUUGUGGAGGCAGCUGCA	15	104	82	37	19	39	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9416464-9416881	Cluster_3742	Pocillopora_meandrina_HIv1___Sc0000012	9416464	9416881	418	200	47	0.995	+	UUGGGUGGCGUUUUCUUA	45	193	3	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9496538-9497031	Cluster_3743	Pocillopora_meandrina_HIv1___Sc0000012	9496538	9497031	494	211	34	0.5876777251184834	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	80	0	211	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9751539-9751969	Cluster_3744	Pocillopora_meandrina_HIv1___Sc0000012	9751539	9751969	431	90	26	0.9888888888888889	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	32	0	90	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9767406-9767836	Cluster_3745	Pocillopora_meandrina_HIv1___Sc0000012	9767406	9767836	431	1279	92	0.01563721657544957	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	404	1	1276	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9772164-9772580	Cluster_3746	Pocillopora_meandrina_HIv1___Sc0000012	9772164	9772580	417	86	14	1.0	+	AUCCCACUCCUGACACCAU	29	82	0	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9778224-9778651	Cluster_3747	Pocillopora_meandrina_HIv1___Sc0000012	9778224	9778651	428	137	23	0.9927007299270073	+	UUCCUGCAAUGGUUUGUGCAUCGUCUGG	38	3	134	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9808308-9808728	Cluster_3748	Pocillopora_meandrina_HIv1___Sc0000012	9808308	9808728	421	75	23	0.013333333333333334	-	UGACUUUAUUUGCGUCACGGAUUAGCUGG	17	0	73	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9831019-9831445	Cluster_3749	Pocillopora_meandrina_HIv1___Sc0000012	9831019	9831445	427	186	86	1.0	+	UCUGUCUCUACGUCGGUGCAAACCAUGCGC	16	4	178	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9836384-9837012	Cluster_3750	Pocillopora_meandrina_HIv1___Sc0000012	9836384	9837012	629	364	142	0.7637362637362637	.	UCGAUCAGGAGAUACAGAGGGAGCUGAGA	27	8	276	0	19	22	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9890855-9891282	Cluster_3751	Pocillopora_meandrina_HIv1___Sc0000012	9890855	9891282	428	115	48	0.008695652173913044	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUUG	27	0	112	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9922141-9922628	Cluster_3752	Pocillopora_meandrina_HIv1___Sc0000012	9922141	9922628	488	685	219	0.7255474452554744	.	CGGCUGCUCAGUAAUUUUCGAUGGGAGU	81	8	598	13	9	25	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9958130-9958557	Cluster_3753	Pocillopora_meandrina_HIv1___Sc0000012	9958130	9958557	428	164	54	0.10365853658536585	-	AACUGAUAGAGCUGCUACACCUGGAAGC	67	23	117	5	11	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9964596-9965831	Cluster_3754	Pocillopora_meandrina_HIv1___Sc0000012	9964596	9965831	1236	7167	456	0.001116227152225478	-	UACUGAACUGGCUAACAUUUGUACAAAAUC	3446	40	6793	6	39	26	263	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9966705-9967134	Cluster_3755	Pocillopora_meandrina_HIv1___Sc0000012	9966705	9967134	430	448	110	0.044642857142857144	-	UUUGCUCUCCAUUCUGCCAGUAGGCCA	52	28	408	6	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:247159-247662	Cluster_3756	Pocillopora_meandrina_HIv1___Sc0000013	247159	247662	504	627	280	0.2886762360446571	.	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	16	30	451	17	16	41	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:249624-250053	Cluster_3757	Pocillopora_meandrina_HIv1___Sc0000013	249624	250053	430	183	82	0.9344262295081968	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	21	0	171	1	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:250128-250671	Cluster_3758	Pocillopora_meandrina_HIv1___Sc0000013	250128	250671	544	368	177	0.8831521739130435	+	UGAGGACAGAUCUAAUGUACUGAAAAGCGUU	38	1	354	1	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:250823-251251	Cluster_3759	Pocillopora_meandrina_HIv1___Sc0000013	250823	251251	429	189	71	0.9523809523809523	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	42	1	183	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:251265-252162	Cluster_3760	Pocillopora_meandrina_HIv1___Sc0000013	251265	252162	898	872	396	0.8497706422018348	+	UCUACGUCUUUCGCUUGUUUUUCACUGAGU	35	4	799	4	3	21	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:338858-339285	Cluster_3761	Pocillopora_meandrina_HIv1___Sc0000013	338858	339285	428	155	49	0.15483870967741936	-	UACGUAUCAAUACAGACACUUUCGUUCA	53	1	152	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:347884-350366	Cluster_3762	Pocillopora_meandrina_HIv1___Sc0000013	347884	350366	2483	5221	1627	0.9321968971461406	+	UCCGAGACUGUAGAUCCGAGUUGAUCCA	200	42	4878	24	36	69	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:474790-475215	Cluster_3763	Pocillopora_meandrina_HIv1___Sc0000013	474790	475215	426	177	76	0.9887005649717514	+	UGAUUGACGUACGGUAUUUGAGACGC	22	5	157	2	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:560422-560849	Cluster_3764	Pocillopora_meandrina_HIv1___Sc0000013	560422	560849	428	613	51	1.0	+	UAAUCGUUGGCUUUUUCUCGAGGCGUG	258	0	613	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:742806-743234	Cluster_3765	Pocillopora_meandrina_HIv1___Sc0000013	742806	743234	429	426	122	0.9647887323943662	+	UGUAGAAUCAAUCUGUUACUAAGACACC	94	3	397	16	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:743991-744451	Cluster_3766	Pocillopora_meandrina_HIv1___Sc0000013	743991	744451	461	1656	479	0.8254830917874396	+	UAUACCUUUGAUUCAUAGCCUUUCUGAU	82	14	1485	19	21	35	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:744782-746779	Cluster_3767	Pocillopora_meandrina_HIv1___Sc0000013	744782	746779	1998	5298	1569	0.10570026425066063	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	376	62	4928	36	51	73	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:746786-747213	Cluster_3768	Pocillopora_meandrina_HIv1___Sc0000013	746786	747213	428	371	162	0.14555256064690028	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	66	3	349	1	0	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:747331-747757	Cluster_3769	Pocillopora_meandrina_HIv1___Sc0000013	747331	747757	427	205	93	0.0975609756097561	-	UGAACUUCUCGGCUCCAAACACUAUGG	56	1	189	1	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:747773-748277	Cluster_3770	Pocillopora_meandrina_HIv1___Sc0000013	747773	748277	505	725	281	0.09655172413793103	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	55	11	649	7	5	20	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:748490-749664	Cluster_3771	Pocillopora_meandrina_HIv1___Sc0000013	748490	749664	1175	1099	463	0.05732484076433121	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	166	19	977	11	22	21	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:922124-922918	Cluster_3772	Pocillopora_meandrina_HIv1___Sc0000013	922124	922918	795	286	108	0.958041958041958	+	UGAAUUUCUGAAGUGUGUUACUGUGGUA	36	1	265	3	0	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1574801-1575213	Cluster_3773	Pocillopora_meandrina_HIv1___Sc0000013	1574801	1575213	413	169	103	0.7988165680473372	.	UGUAAGACGCACUCUACUCUGUUGU	15	8	141	4	3	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1671541-1672316	Cluster_3774	Pocillopora_meandrina_HIv1___Sc0000013	1671541	1672316	776	241	38	0.9626556016597511	+	UUGGACUGUGCAUAACCAUUUGC	101	5	100	3	3	123	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1700378-1701919	Cluster_3775	Pocillopora_meandrina_HIv1___Sc0000013	1700378	1701919	1542	6556	1664	0.5838926174496645	.	AAGCAGAAGAAGAUCUUGGUGACA	686	80	4554	37	212	263	1410	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1702156-1702853	Cluster_3776	Pocillopora_meandrina_HIv1___Sc0000013	1702156	1702853	698	1000	370	0.069	-	UGUUCCUUGAAUUCUGCGUGCACAAAGC	205	8	932	6	15	9	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1702993-1705652	Cluster_3777	Pocillopora_meandrina_HIv1___Sc0000013	1702993	1705652	2660	4451	1865	0.09952819591103122	-	UGAUAACUUGCUAUCGAUCGCGGUACU	72	101	3930	59	58	117	186	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1714408-1714827	Cluster_3778	Pocillopora_meandrina_HIv1___Sc0000013	1714408	1714827	420	259	171	0.8764478764478765	+	UCUAUAUUACAAAAUAAAUUGUGGGACGUA	16	70	122	33	17	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1870222-1870651	Cluster_3779	Pocillopora_meandrina_HIv1___Sc0000013	1870222	1870651	430	389	102	0.04884318766066838	-	UGAUCAAGUUUCCUAUCGCCUGUAAACACU	91	2	373	2	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1924250-1925026	Cluster_3780	Pocillopora_meandrina_HIv1___Sc0000013	1924250	1925026	777	287	35	0.9895470383275261	+	UUGGACUGUGCAUAACCAUUUGC	139	1	109	0	7	164	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2014873-2016821	Cluster_3781	Pocillopora_meandrina_HIv1___Sc0000013	2014873	2016821	1949	3143	1034	0.25517021953547564	.	UGAUACGAGUAGUUGGAUACAAUCUAAACU	300	35	2875	15	19	49	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2017862-2019125	Cluster_3782	Pocillopora_meandrina_HIv1___Sc0000013	2017862	2019125	1264	1435	562	0.8153310104529616	+	UGUAACUGGUUCACUGCGAUUUUGUAGU	99	8	1271	9	14	33	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2019206-2019650	Cluster_3783	Pocillopora_meandrina_HIv1___Sc0000013	2019206	2019650	445	911	263	0.8419319429198683	+	UGAUAUGACCUUCGGCAAAAAACUGGA	107	3	806	5	6	25	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2586733-2587160	Cluster_3784	Pocillopora_meandrina_HIv1___Sc0000013	2586733	2587160	428	182	69	0.016483516483516484	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	33	3	170	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2639722-2640750	Cluster_3785	Pocillopora_meandrina_HIv1___Sc0000013	2639722	2640750	1029	2365	603	0.9822410147991544	+	UCGGAUUACGCACGAUCACACGUGUCGAGC	100	7	2294	6	10	14	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2641296-2642053	Cluster_3786	Pocillopora_meandrina_HIv1___Sc0000013	2641296	2642053	758	715	328	0.9552447552447553	+	UGCGUUCCUGAAGCAACUUUUGCCUC	55	5	673	9	4	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2949721-2950629	Cluster_3787	Pocillopora_meandrina_HIv1___Sc0000013	2949721	2950629	909	475	248	0.04631578947368421	-	UAGGUAAUGGCACAAACUGAGAGGCGUG	23	1	452	3	1	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2953747-2954523	Cluster_3788	Pocillopora_meandrina_HIv1___Sc0000013	2953747	2954523	777	274	28	0.9927007299270073	+	UUGGACUGUGCAUAACCAUUUGC	134	0	104	0	3	159	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3143644-3144540	Cluster_3789	Pocillopora_meandrina_HIv1___Sc0000013	3143644	3144540	897	1900	545	0.10157894736842105	-	UAAUAGCGACUUUCAACUUCGUGUUUGUC	187	34	1736	22	26	31	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3145050-3146621	Cluster_3790	Pocillopora_meandrina_HIv1___Sc0000013	3145050	3146621	1572	2262	989	0.07427055702917772	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	80	15	2073	13	13	88	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3236496-3236922	Cluster_3791	Pocillopora_meandrina_HIv1___Sc0000013	3236496	3236922	427	145	55	0.027586206896551724	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	0	139	1	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3300860-3301290	Cluster_3792	Pocillopora_meandrina_HIv1___Sc0000013	3300860	3301290	431	632	143	0.9794303797468354	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	128	0	625	3	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3301409-3301940	Cluster_3793	Pocillopora_meandrina_HIv1___Sc0000013	3301409	3301940	532	600	243	0.9883333333333333	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	30	5	579	3	4	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3303861-3304796	Cluster_3794	Pocillopora_meandrina_HIv1___Sc0000013	3303861	3304796	936	559	290	0.9016100178890877	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	28	7	504	6	4	13	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3304810-3305374	Cluster_3795	Pocillopora_meandrina_HIv1___Sc0000013	3304810	3305374	565	3508	662	0.9780501710376283	+	UGAUUUGUACGACCCACUCCUGUUAAC	377	156	3155	13	37	33	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3318555-3319049	Cluster_3796	Pocillopora_meandrina_HIv1___Sc0000013	3318555	3319049	495	489	294	0.20245398773006135	.	UCCGUUUCGAGGUAUUUAUUUAGAGCUC	13	6	423	6	2	10	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3319168-3320243	Cluster_3797	Pocillopora_meandrina_HIv1___Sc0000013	3319168	3320243	1076	3242	885	0.055521283158544106	-	UAUUGAUCUUACAGGCUCCGCAGCGGUU	181	41	3053	25	17	34	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3320297-3321342	Cluster_3798	Pocillopora_meandrina_HIv1___Sc0000013	3320297	3321342	1046	948	410	0.04008438818565401	-	UAUAGUUCUUCUGUACUGGCUCAUUGUC	54	8	905	2	6	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3321678-3322080	Cluster_3799	Pocillopora_meandrina_HIv1___Sc0000013	3321678	3322080	403	236	177	0.3432203389830508	.	UGCGUGAGAAAUCCUGGAUGUAUUGCC	9	52	113	22	23	18	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3322348-3323396	Cluster_3800	Pocillopora_meandrina_HIv1___Sc0000013	3322348	3323396	1049	592	324	0.07432432432432433	-	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	33	11	539	4	4	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3323431-3324524	Cluster_3801	Pocillopora_meandrina_HIv1___Sc0000013	3323431	3324524	1094	1098	414	0.020947176684881604	-	UGAGACUCUCUUGUUGUAAUAUUGCUUG	98	9	1055	5	4	8	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3417712-3418164	Cluster_3802	Pocillopora_meandrina_HIv1___Sc0000013	3417712	3418164	453	223	77	0.9820627802690582	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	40	2	218	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3418321-3418805	Cluster_3803	Pocillopora_meandrina_HIv1___Sc0000013	3418321	3418805	485	373	213	0.8552278820375335	+	UGAUUCCGCGCUUAUGACUCGUCCCAU	17	3	330	2	5	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3419082-3422943	Cluster_3804	Pocillopora_meandrina_HIv1___Sc0000013	3419082	3422943	3862	5857	2081	0.9200956120880998	+	UGUACAACCAUCCGAUACUCUUGU	703	98	4446	36	35	94	1148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3423803-3424977	Cluster_3805	Pocillopora_meandrina_HIv1___Sc0000013	3423803	3424977	1175	1440	603	0.8680555555555556	+	UACAAUAACCUCUGAUUUCACUAAAUG	70	6	1336	4	9	27	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3639403-3640179	Cluster_3806	Pocillopora_meandrina_HIv1___Sc0000013	3639403	3640179	777	403	46	0.9925558312655087	+	UUGGACUGUGCAUAACCAUUUGC	107	2	264	2	7	125	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3889072-3889791	Cluster_3807	Pocillopora_meandrina_HIv1___Sc0000013	3889072	3889791	720	363	171	0.0440771349862259	-	UGAAUUCUUCGUAAACGGUUUCCUGGUC	32	2	352	2	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4059763-4060360	Cluster_3808	Pocillopora_meandrina_HIv1___Sc0000013	4059763	4060360	598	919	322	0.9934711643090316	+	UGUUCUUCUUGACUCUGACGAUCUUCAAC	116	8	897	2	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4060437-4061315	Cluster_3809	Pocillopora_meandrina_HIv1___Sc0000013	4060437	4061315	879	928	390	0.9838362068965517	+	UGCUGAAACGAUUUUGACAGGUUGUCA	69	5	877	7	8	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4061705-4062570	Cluster_3810	Pocillopora_meandrina_HIv1___Sc0000013	4061705	4062570	866	1157	387	0.996542783059637	+	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	81	10	1123	4	7	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4062978-4063459	Cluster_3811	Pocillopora_meandrina_HIv1___Sc0000013	4062978	4063459	482	507	167	0.9960552268244576	+	UACAAAGCUCUCACGAAUUCACAAACAGA	62	0	499	1	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4081126-4081571	Cluster_3812	Pocillopora_meandrina_HIv1___Sc0000013	4081126	4081571	446	538	64	0.7342007434944238	.	UCGUUUAGAUCAGAGAUCACCUCAACU	195	0	536	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4113474-4113899	Cluster_3813	Pocillopora_meandrina_HIv1___Sc0000013	4113474	4113899	426	95	38	0.9894736842105263	+	UGUGUAGAUAUGUCUUUUGGACAGGA	27	1	91	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4115225-4115648	Cluster_3814	Pocillopora_meandrina_HIv1___Sc0000013	4115225	4115648	424	171	90	0.8830409356725146	+	UAAAAUGACUGUUUCCGAUGUUCCCU	12	1	154	1	10	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4150193-4150677	Cluster_3815	Pocillopora_meandrina_HIv1___Sc0000013	4150193	4150677	485	1788	213	0.9983221476510067	+	UGGACAAAUUCAUAGGUCUGAUGCAAACAUG	385	32	1731	5	7	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4150722-4151147	Cluster_3816	Pocillopora_meandrina_HIv1___Sc0000013	4150722	4151147	426	172	59	0.9418604651162791	+	UAAGACCCAUCCAUCACUAUCAACUCG	28	1	170	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4151796-4152622	Cluster_3817	Pocillopora_meandrina_HIv1___Sc0000013	4151796	4152622	827	235	53	0.9872340425531915	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	67	0	233	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4157441-4157851	Cluster_3818	Pocillopora_meandrina_HIv1___Sc0000013	4157441	4157851	411	101	37	0.6039603960396039	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	21	0	100	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4160208-4160634	Cluster_3819	Pocillopora_meandrina_HIv1___Sc0000013	4160208	4160634	427	178	55	0.8033707865168539	+	UGUCAAAUUCUCGUCUUCCUAACCUUU	69	0	170	3	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4178099-4178583	Cluster_3820	Pocillopora_meandrina_HIv1___Sc0000013	4178099	4178583	485	550	189	0.11636363636363636	-	UUAAACCGACUCACAGUCCGAUUCGAAU	109	3	512	4	2	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4188971-4189372	Cluster_3821	Pocillopora_meandrina_HIv1___Sc0000013	4188971	4189372	402	123	69	0.08943089430894309	-	UGUAAUCAUACGCUUAGCCUCAGUGAACGCU	11	2	113	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4189453-4190082	Cluster_3822	Pocillopora_meandrina_HIv1___Sc0000013	4189453	4190082	630	491	253	0.0855397148676171	-	UAGGUAAUGGCACAAACUGAGAGGCGU	29	2	458	3	4	13	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4192997-4193773	Cluster_3823	Pocillopora_meandrina_HIv1___Sc0000013	4192997	4193773	777	231	27	0.9956709956709957	+	UUGGACUGUGCAUAACCAUUUGC	105	0	96	0	1	128	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4470522-4471298	Cluster_3824	Pocillopora_meandrina_HIv1___Sc0000013	4470522	4471298	777	277	34	0.9927797833935018	+	UUGGACUGUGCAUAACCAUUUGC	118	2	122	0	2	146	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4504525-4504942	Cluster_3825	Pocillopora_meandrina_HIv1___Sc0000013	4504525	4504942	418	186	2	1.0	+	UGGCCUGAAAAAAAAAAA	185	186	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4609215-4609720	Cluster_3826	Pocillopora_meandrina_HIv1___Sc0000013	4609215	4609720	506	412	129	0.5825242718446602	.	AAGGAUACCACAUUCGGAAGUGUAAGAGA	56	16	371	5	7	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4609804-4610233	Cluster_3827	Pocillopora_meandrina_HIv1___Sc0000013	4609804	4610233	430	386	138	0.9870466321243523	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	54	9	290	8	3	19	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4811421-4811847	Cluster_3828	Pocillopora_meandrina_HIv1___Sc0000013	4811421	4811847	427	163	84	0.25766871165644173	.	UGUCGACCGCAACCGCAAGCUUUCCGAGU	22	7	147	2	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4816264-4816691	Cluster_3829	Pocillopora_meandrina_HIv1___Sc0000013	4816264	4816691	428	248	83	0.875	+	UACGUAUCAAUACAGACACUUUCGUUCA	104	8	231	0	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4860236-4860664	Cluster_3830	Pocillopora_meandrina_HIv1___Sc0000013	4860236	4860664	429	189	55	0.8994708994708994	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	64	0	179	0	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5103387-5104123	Cluster_3831	Pocillopora_meandrina_HIv1___Sc0000013	5103387	5104123	737	3873	583	0.9842499354505552	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	735	5	3813	3	2	13	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5105247-5106448	Cluster_3832	Pocillopora_meandrina_HIv1___Sc0000013	5105247	5106448	1202	2682	845	0.825876211782252	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	126	37	2461	19	23	26	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5107643-5109615	Cluster_3833	Pocillopora_meandrina_HIv1___Sc0000013	5107643	5109615	1973	5743	1474	0.9367926170990771	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	508	24	5502	16	23	60	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5110149-5110887	Cluster_3834	Pocillopora_meandrina_HIv1___Sc0000013	5110149	5110887	739	352	155	0.9545454545454546	+	UCAUCUCGGUUUUUGCAAAAUGUCAA	18	3	321	3	2	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5111128-5111556	Cluster_3835	Pocillopora_meandrina_HIv1___Sc0000013	5111128	5111556	429	566	55	1.0	+	UGUGAGUUGAUGUUUGGUGGGAUACCU	183	6	557	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5111652-5112680	Cluster_3836	Pocillopora_meandrina_HIv1___Sc0000013	5111652	5112680	1029	4234	937	0.8863958431743033	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	454	55	3926	17	20	82	134	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5112751-5113300	Cluster_3837	Pocillopora_meandrina_HIv1___Sc0000013	5112751	5113300	550	4269	569	0.5947528695244788	.	ACAAGACAGAAUUCCAGCUGAUACAGA	484	48	3936	12	40	78	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5114630-5115060	Cluster_3838	Pocillopora_meandrina_HIv1___Sc0000013	5114630	5115060	431	947	94	0.012671594508975714	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	575	4	920	2	1	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5116587-5118347	Cluster_3839	Pocillopora_meandrina_HIv1___Sc0000013	5116587	5118347	1761	2239	721	0.23358642251004913	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	109	17	2057	7	8	43	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5118826-5119253	Cluster_3840	Pocillopora_meandrina_HIv1___Sc0000013	5118826	5119253	428	152	64	0.02631578947368421	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	24	5	146	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5119308-5120042	Cluster_3841	Pocillopora_meandrina_HIv1___Sc0000013	5119308	5120042	735	1127	310	0.06921029281277728	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	136	7	1064	2	4	24	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5193210-5194947	Cluster_3842	Pocillopora_meandrina_HIv1___Sc0000013	5193210	5194947	1738	2689	1070	0.04202305689847527	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	86	7	2554	11	29	50	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5199542-5200866	Cluster_3843	Pocillopora_meandrina_HIv1___Sc0000013	5199542	5200866	1325	1598	697	0.07008760951188986	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	43	8	1486	5	6	28	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5201147-5201898	Cluster_3844	Pocillopora_meandrina_HIv1___Sc0000013	5201147	5201898	752	759	252	0.022397891963109356	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	80	3	734	4	1	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5203239-5204089	Cluster_3845	Pocillopora_meandrina_HIv1___Sc0000013	5203239	5204089	851	1518	480	0.09354413702239789	-	UGAUUUAUAGGAGUAAUGAGACAUUAU	134	27	1390	22	20	15	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5204644-5206216	Cluster_3846	Pocillopora_meandrina_HIv1___Sc0000013	5204644	5206216	1573	2037	921	0.0859106529209622	-	UAUGAUAAAUACUUCUGCCUAGCUCCUGC	60	20	1849	9	12	78	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5206473-5207150	Cluster_3847	Pocillopora_meandrina_HIv1___Sc0000013	5206473	5207150	678	8103	523	0.0035789213871405654	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2249	10	7959	2	62	36	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5207204-5208976	Cluster_3848	Pocillopora_meandrina_HIv1___Sc0000013	5207204	5208976	1773	9356	2373	0.07642154766994443	-	UGAUAGACUGCACGACGAUUUACGUCA	529	103	8462	69	71	299	352	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5212065-5212493	Cluster_3849	Pocillopora_meandrina_HIv1___Sc0000013	5212065	5212493	429	112	33	0.008928571428571428	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	68	0	112	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5216419-5216850	Cluster_3850	Pocillopora_meandrina_HIv1___Sc0000013	5216419	5216850	432	390	145	0.07948717948717948	-	UGUUUUGGUGUGUUCAAGUAUCUUUGA	30	4	378	1	1	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5219579-5219999	Cluster_3851	Pocillopora_meandrina_HIv1___Sc0000013	5219579	5219999	421	102	46	0.0	-	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	19	1	98	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5221124-5221549	Cluster_3852	Pocillopora_meandrina_HIv1___Sc0000013	5221124	5221549	426	122	40	0.27049180327868855	.	UGUACUUUCUUUGGGCCAUGUAAUCU	27	1	118	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5484731-5485161	Cluster_3853	Pocillopora_meandrina_HIv1___Sc0000013	5484731	5485161	431	209	38	1.0	+	UGUGUGACUUUGUAUGUAUAUUGAGCGU	41	0	208	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5492193-5492621	Cluster_3854	Pocillopora_meandrina_HIv1___Sc0000013	5492193	5492621	429	214	107	0.102803738317757	-	UAAUGAACGUAUAGCCAUCCAGUUGAACU	15	2	201	2	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5492634-5493056	Cluster_3855	Pocillopora_meandrina_HIv1___Sc0000013	5492634	5493056	423	156	104	0.1346153846153846	-	UAACACUAUAAACAUUCUGAGGGCGAUU	7	1	135	3	3	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5580444-5580871	Cluster_3856	Pocillopora_meandrina_HIv1___Sc0000013	5580444	5580871	428	101	23	0.0297029702970297	-	UGAACACGCUCUGAGAACUUGUUUUACG	43	0	100	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5586524-5587233	Cluster_3857	Pocillopora_meandrina_HIv1___Sc0000013	5586524	5587233	710	454	198	0.9559471365638766	+	UUCUCAAUGUUCGUAGGACGUGUAAACACU	25	7	429	4	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5587541-5588626	Cluster_3858	Pocillopora_meandrina_HIv1___Sc0000013	5587541	5588626	1086	3703	903	0.9819065622468269	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	146	29	3598	9	12	27	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5588764-5589335	Cluster_3859	Pocillopora_meandrina_HIv1___Sc0000013	5588764	5589335	572	964	238	0.9802904564315352	+	UGCAUUCUCAAGUCGUGCUCUGUAACGG	244	4	910	3	5	8	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5589521-5590015	Cluster_3860	Pocillopora_meandrina_HIv1___Sc0000013	5589521	5590015	495	653	225	0.9509954058192955	+	UGACGUGUCCUAGGUACUCCACAAAACU	65	15	597	1	10	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5590759-5592015	Cluster_3861	Pocillopora_meandrina_HIv1___Sc0000013	5590759	5592015	1257	1358	511	0.9617083946980854	+	UGAUUUGUACGACCCACUCCUGUUAAC	48	27	1263	5	6	14	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5595130-5595558	Cluster_3862	Pocillopora_meandrina_HIv1___Sc0000013	5595130	5595558	429	307	51	1.0	+	UGGGUUGAGUGAAUUUGUGAGGAAACUGA	131	4	289	3	4	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5595910-5596340	Cluster_3863	Pocillopora_meandrina_HIv1___Sc0000013	5595910	5596340	431	1100	127	1.0	+	UUCAUUCUGUAAUCUUCUCUAAGUCUAGA	219	6	1089	3	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5596710-5597139	Cluster_3864	Pocillopora_meandrina_HIv1___Sc0000013	5596710	5597139	430	420	83	0.9047619047619048	+	UGGACAAACAGUAACGUUACUAUUGCGGUU	135	3	407	1	4	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5735573-5736026	Cluster_3865	Pocillopora_meandrina_HIv1___Sc0000013	5735573	5736026	454	236	99	0.7076271186440678	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	78	10	206	5	3	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5935242-5935645	Cluster_3866	Pocillopora_meandrina_HIv1___Sc0000013	5935242	5935645	404	79	40	0.06329113924050633	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	16	0	74	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5936944-5937371	Cluster_3867	Pocillopora_meandrina_HIv1___Sc0000013	5936944	5937371	428	194	76	0.020618556701030927	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	30	2	188	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6078488-6078915	Cluster_3868	Pocillopora_meandrina_HIv1___Sc0000013	6078488	6078915	428	118	24	0.9915254237288136	+	GCACCAAUCAGAGCUGUUGAAAAACAACA	44	2	113	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6097078-6097495	Cluster_3869	Pocillopora_meandrina_HIv1___Sc0000013	6097078	6097495	418	1180	19	0.00847457627118644	-	AACUUGAAGCGGUUGGAU	1132	1172	4	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6250219-6250632	Cluster_3870	Pocillopora_meandrina_HIv1___Sc0000013	6250219	6250632	414	127	52	0.007874015748031496	-	UGUGACGGUGUGUUAGGACAUUAAUAUA	18	3	115	1	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6278311-6278734	Cluster_3871	Pocillopora_meandrina_HIv1___Sc0000013	6278311	6278734	424	121	61	0.35537190082644626	.	UAGUCUAUCUCUUAACGCGUCAUUCAAG	24	1	109	1	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6284962-6285389	Cluster_3872	Pocillopora_meandrina_HIv1___Sc0000013	6284962	6285389	428	136	53	0.014705882352941176	-	UAAAGAACAAUUAAUUAUCUCUGCCAAG	40	1	135	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6305354-6305781	Cluster_3873	Pocillopora_meandrina_HIv1___Sc0000013	6305354	6305781	428	117	20	0.042735042735042736	-	AACUACUGCUCGUGCUCUAGAUAUGACA	72	2	113	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6319583-6320179	Cluster_3874	Pocillopora_meandrina_HIv1___Sc0000013	6319583	6320179	597	5737	479	0.0019173784207774098	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	842	9	5682	3	4	8	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6764524-6764937	Cluster_3875	Pocillopora_meandrina_HIv1___Sc0000013	6764524	6764937	414	105	62	1.0	+	UGACGAUUUUCGCGGCUCGAUUUUGU	14	0	105	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6783062-6783551	Cluster_3876	Pocillopora_meandrina_HIv1___Sc0000013	6783062	6783551	490	177	85	0.8587570621468926	+	CGGGAUCGAAAAACUAAAUUUUU	9	0	153	0	0	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6788067-6792416	Cluster_3877	Pocillopora_meandrina_HIv1___Sc0000013	6788067	6792416	4350	14370	3810	0.9377870563674322	+	UGACUCUUCAAUCUCUGAAACGACUGCUC	483	112	13457	31	89	259	422	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6839929-6840346	Cluster_3878	Pocillopora_meandrina_HIv1___Sc0000013	6839929	6840346	418	148	74	0.02702702702702703	-	UUGUUAACUUUGUCUACC	33	42	103	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6869967-6870390	Cluster_3879	Pocillopora_meandrina_HIv1___Sc0000013	6869967	6870390	424	281	153	0.33807829181494664	.	AGCGGUCUUCUCUUUUGUGC	13	160	12	74	28	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7305232-7305828	Cluster_3880	Pocillopora_meandrina_HIv1___Sc0000013	7305232	7305828	597	5689	535	0.004746001054666901	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	833	10	5630	1	6	12	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7340257-7341730	Cluster_3881	Pocillopora_meandrina_HIv1___Sc0000013	7340257	7341730	1474	964	464	0.29149377593361	.	UCAGAACUUCAGUAGCAAUGUGCCUAUA	35	25	866	3	14	25	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7341786-7342214	Cluster_3882	Pocillopora_meandrina_HIv1___Sc0000013	7341786	7342214	429	314	177	0.4171974522292994	.	UCUGUCUUUGUGUUCUUACGGUACUUCA	14	10	261	6	15	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7345946-7346369	Cluster_3883	Pocillopora_meandrina_HIv1___Sc0000013	7345946	7346369	424	151	74	0.152317880794702	-	UUGAACUGUUGCAUGCUUCCAUCAAACAU	14	1	129	0	0	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7347540-7348292	Cluster_3884	Pocillopora_meandrina_HIv1___Sc0000013	7347540	7348292	753	684	167	0.017543859649122806	-	UGUAAUACUUCAACAAGGGUGCCUCUGUC	157	3	673	1	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7348557-7349496	Cluster_3885	Pocillopora_meandrina_HIv1___Sc0000013	7348557	7349496	940	1130	339	0.035398230088495575	-	UCUUCCUCUUUACUGUUUCAGCUGGUAC	90	6	1070	8	11	17	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7352066-7352496	Cluster_3886	Pocillopora_meandrina_HIv1___Sc0000013	7352066	7352496	431	829	129	0.8914354644149578	+	UUGAGUUGUAUGACACUGGACGUAGAGA	130	2	632	0	5	130	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7354773-7355198	Cluster_3887	Pocillopora_meandrina_HIv1___Sc0000013	7354773	7355198	426	175	74	0.4514285714285714	.	UGUGAAAGCGGAAUUGCUCCACUAUGAGC	14	6	161	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7362821-7363225	Cluster_3888	Pocillopora_meandrina_HIv1___Sc0000013	7362821	7363225	405	71	21	0.0	-	UGAGAUCUUUUUUACCUAAGUUGUUUGGA	22	2	68	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7379717-7380725	Cluster_3889	Pocillopora_meandrina_HIv1___Sc0000013	7379717	7380725	1009	1803	623	0.0011092623405435386	-	UUCUCUGUUUACUGACUCCUUGUGGAAUGU	67	8	1755	2	18	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7384431-7384855	Cluster_3890	Pocillopora_meandrina_HIv1___Sc0000013	7384431	7384855	425	94	36	0.9468085106382979	+	UGUGUUUUCAAGGUCUGCAGCUGAUGU	20	0	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7386579-7387009	Cluster_3891	Pocillopora_meandrina_HIv1___Sc0000013	7386579	7387009	431	301	188	0.6345514950166113	.	UGAAUAUUCUGAGCUCAUGGCACGUGU	10	82	164	28	17	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7398727-7400680	Cluster_3892	Pocillopora_meandrina_HIv1___Sc0000013	7398727	7400680	1954	5219	1668	0.1184134891741713	-	UAAACACACGAUUUCUAGGUAACGAACAG	370	46	4832	36	62	72	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7400687-7401114	Cluster_3893	Pocillopora_meandrina_HIv1___Sc0000013	7400687	7401114	428	330	139	0.11818181818181818	-	UUGUCGUGAUCUUUCACUGCUUCUUGC	59	4	314	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7401232-7401658	Cluster_3894	Pocillopora_meandrina_HIv1___Sc0000013	7401232	7401658	427	159	82	0.0880503144654088	-	UGAACUUCUCGGCUCCAAACACUAUGG	53	2	148	1	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7401674-7402105	Cluster_3895	Pocillopora_meandrina_HIv1___Sc0000013	7401674	7402105	432	485	207	0.07010309278350516	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	59	5	458	3	2	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7402160-7403566	Cluster_3896	Pocillopora_meandrina_HIv1___Sc0000013	7402160	7403566	1407	1079	423	0.05282669138090825	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	171	14	989	1	14	34	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7406044-7406903	Cluster_3897	Pocillopora_meandrina_HIv1___Sc0000013	7406044	7406903	860	1612	263	0.062034739454094295	-	UGAUCUGUAUCUGAUGAAAAGCUUCCUC	309	2	1599	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7421857-7422707	Cluster_3898	Pocillopora_meandrina_HIv1___Sc0000013	7421857	7422707	851	1367	472	0.11923920994879297	-	UGUGAAUAUCCAUUUGCUUUGACUGGC	121	22	1246	23	26	20	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7423262-7425037	Cluster_3899	Pocillopora_meandrina_HIv1___Sc0000013	7423262	7425037	1776	2570	1131	0.08793774319066149	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	70	23	2354	8	23	94	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7430118-7430544	Cluster_3900	Pocillopora_meandrina_HIv1___Sc0000013	7430118	7430544	427	122	39	0.0	-	UUGGUAACGACUUUCCGGAAAUUUCGGCU	23	0	121	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7431062-7432914	Cluster_3901	Pocillopora_meandrina_HIv1___Sc0000013	7431062	7432914	1853	22739	2648	0.1703680900655262	-	UCCGGUCAAUGUUUAGAGAGCUGAAUAA	1430	126	21459	84	128	221	721	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7433202-7433630	Cluster_3902	Pocillopora_meandrina_HIv1___Sc0000013	7433202	7433630	429	366	136	0.7349726775956285	.	UAGGACAAUUAGCAUUACAGCAGCUUA	25	3	327	8	5	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7433650-7435148	Cluster_3903	Pocillopora_meandrina_HIv1___Sc0000013	7433650	7435148	1499	1428	577	0.3795518207282913	.	CGAUUUCUUAUGUUCAUGCGACUGUUGUG	72	18	1263	14	21	28	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7436253-7437576	Cluster_3904	Pocillopora_meandrina_HIv1___Sc0000013	7436253	7437576	1324	1638	718	0.06837606837606838	-	UAAAGUAUCAUUCCUCGUCACGAACCCG	34	14	1529	13	6	13	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7437859-7438608	Cluster_3905	Pocillopora_meandrina_HIv1___Sc0000013	7437859	7438608	750	820	291	0.03536585365853658	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	73	2	796	2	2	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7441299-7442030	Cluster_3906	Pocillopora_meandrina_HIv1___Sc0000013	7441299	7442030	732	444	238	0.0022522522522522522	-	UGUGUGUCAAAGCUGAACUUAAAGAGCUC	31	3	431	0	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7444686-7445113	Cluster_3907	Pocillopora_meandrina_HIv1___Sc0000013	7444686	7445113	428	90	18	0.0	-	UGAAUCGUGUCUUUAGCCAUUUGACUUGC	33	1	89	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7453585-7454507	Cluster_3908	Pocillopora_meandrina_HIv1___Sc0000013	7453585	7454507	923	5459	857	0.005129144531965561	-	UGAUCACUUGGAGGGUUUGCACUCGGAG	766	45	5264	14	24	55	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7507701-7508131	Cluster_3909	Pocillopora_meandrina_HIv1___Sc0000013	7507701	7508131	431	318	146	0.03773584905660377	-	UGAUAACUGUACUCUUGAAAUUCAUCGAU	22	2	303	0	3	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7508152-7508574	Cluster_3910	Pocillopora_meandrina_HIv1___Sc0000013	7508152	7508574	423	209	123	0.18660287081339713	-	UAUCCUUAAUCUUGAUGGCUCGAGACGU	11	1	205	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7511232-7511659	Cluster_3911	Pocillopora_meandrina_HIv1___Sc0000013	7511232	7511659	428	89	27	0.033707865168539325	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	20	0	84	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7522996-7523424	Cluster_3912	Pocillopora_meandrina_HIv1___Sc0000013	7522996	7523424	429	199	72	0.005025125628140704	-	UAAUAACGACUGCCUUUACUGAAUGGGUC	43	0	197	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7527069-7527699	Cluster_3913	Pocillopora_meandrina_HIv1___Sc0000013	7527069	7527699	631	307	141	0.048859934853420196	-	UCAUCUCGGUUUUUGCAAAAUGUCAA	17	0	282	1	2	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7528339-7530310	Cluster_3914	Pocillopora_meandrina_HIv1___Sc0000013	7528339	7530310	1972	5668	1528	0.06227946365561045	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	466	31	5423	13	24	58	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7533025-7533812	Cluster_3915	Pocillopora_meandrina_HIv1___Sc0000013	7533025	7533812	788	734	274	0.05994550408719346	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	44	2	699	3	9	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7535004-7535413	Cluster_3916	Pocillopora_meandrina_HIv1___Sc0000013	7535004	7535413	410	182	88	0.6428571428571429	.	UGAUAUUUUUGACCGGGCAAAAAGAAUUA	15	3	176	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7535593-7536021	Cluster_3917	Pocillopora_meandrina_HIv1___Sc0000013	7535593	7536021	429	385	96	0.9142857142857143	+	UGCAGAUCCAGGGAAAUCACAAUUGACG	85	3	376	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7541849-7543172	Cluster_3918	Pocillopora_meandrina_HIv1___Sc0000013	7541849	7543172	1324	1625	716	0.06953846153846154	-	UAAAGUAUCAUUCCUCGUCACGAACCCG	37	14	1502	9	6	23	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7543455-7543898	Cluster_3919	Pocillopora_meandrina_HIv1___Sc0000013	7543455	7543898	444	722	197	0.009695290858725761	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	75	0	713	1	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7546244-7547421	Cluster_3920	Pocillopora_meandrina_HIv1___Sc0000013	7546244	7547421	1178	12334	2119	0.09194097616345062	-	UGAUUUAAGAUCCAUUUGGAAGUUGCUG	566	144	11696	64	89	149	192	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7549121-7549521	Cluster_3921	Pocillopora_meandrina_HIv1___Sc0000013	7549121	7549521	401	121	63	0.0	-	UCCGAGAAGCUGAUUUCUGGACCAGUA	18	1	112	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7551768-7552195	Cluster_3922	Pocillopora_meandrina_HIv1___Sc0000013	7551768	7552195	428	210	34	0.0761904761904762	-	UGGGUCUACUUCGAAUUCAUCGUUGUU	79	0	198	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7559048-7559474	Cluster_3923	Pocillopora_meandrina_HIv1___Sc0000013	7559048	7559474	427	287	136	0.05226480836236934	-	UGCAAACUUUAGCAAAGUGUCGGAUGUG	34	1	270	5	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7559613-7560998	Cluster_3924	Pocillopora_meandrina_HIv1___Sc0000013	7559613	7560998	1386	9019	1017	0.04346379864730014	-	UGAAGAACUUGGUCGAUUACAUGUUGAUA	4416	36	8683	30	35	68	167	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7561746-7562427	Cluster_3925	Pocillopora_meandrina_HIv1___Sc0000013	7561746	7562427	682	1494	259	0.030120481927710843	-	UAAUAUCUGCUGUAGUAGUCAACAACUAC	334	6	1453	3	6	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7585879-7586309	Cluster_3926	Pocillopora_meandrina_HIv1___Sc0000013	7585879	7586309	431	1346	119	0.002228826151560178	-	UGGGUUGAGUGAAUUUUUAAGGAAAUUAAA	478	25	1171	8	102	26	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7589860-7590544	Cluster_3927	Pocillopora_meandrina_HIv1___Sc0000013	7589860	7590544	685	677	140	0.0	-	UGCUUCCUGAACAUGUGUUGCUAGAGUGGA	188	8	633	2	27	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7605446-7606438	Cluster_3928	Pocillopora_meandrina_HIv1___Sc0000013	7605446	7606438	993	792	352	0.026515151515151516	-	UUGGUGUAACCACAGCUGUCUUCCAUUUUGA	39	11	725	3	6	34	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7606715-7608654	Cluster_3929	Pocillopora_meandrina_HIv1___Sc0000013	7606715	7608654	1940	3955	1389	0.03438685208596713	-	UGCAAAACAGCUUUCCUUCUCUAACAAUGA	76	22	3758	10	31	53	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7611226-7612352	Cluster_3930	Pocillopora_meandrina_HIv1___Sc0000013	7611226	7612352	1127	1713	754	0.4109748978400467	.	UCAAGGAUAACUAACUCAUGGCUGAGAUU	40	24	1434	15	22	67	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7615407-7615924	Cluster_3931	Pocillopora_meandrina_HIv1___Sc0000013	7615407	7615924	518	706	295	0.15155807365439095	-	UCAUCUGGUGUGAUUGUAUCGUGUGCAC	37	5	630	8	9	13	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7616599-7617436	Cluster_3932	Pocillopora_meandrina_HIv1___Sc0000013	7616599	7617436	838	429	194	0.15384615384615385	-	UGAGAUCUUUUUAGCUUGAGUUUGUUGA	68	6	398	4	4	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7617489-7618190	Cluster_3933	Pocillopora_meandrina_HIv1___Sc0000013	7617489	7618190	702	594	266	0.12794612794612795	-	UGAAUGAUCUAUCUCGGCAAGUGUACAG	31	10	552	3	2	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7622381-7623212	Cluster_3934	Pocillopora_meandrina_HIv1___Sc0000013	7622381	7623212	832	1624	380	0.01293103448275862	-	UGUUUAUUGUGCGAACUCGACUGCCGCCAC	214	6	1590	3	4	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7624500-7624996	Cluster_3935	Pocillopora_meandrina_HIv1___Sc0000013	7624500	7624996	497	1061	226	0.03958529688972667	-	UGAUAGGACUAAGAGUAUGGUUGAAACC	219	4	993	11	3	24	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7625146-7625560	Cluster_3936	Pocillopora_meandrina_HIv1___Sc0000013	7625146	7625560	415	244	141	0.06147540983606557	-	UAAGGUCUUCCCAAAGUGUCAAUGCGAU	11	5	223	1	4	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7636106-7636536	Cluster_3937	Pocillopora_meandrina_HIv1___Sc0000013	7636106	7636536	431	477	168	0.0	-	UGUAUUACUGGAGUAAGUUAGAUCAUCGUCC	73	40	420	7	0	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7637219-7638133	Cluster_3938	Pocillopora_meandrina_HIv1___Sc0000013	7637219	7638133	915	1348	387	0.017062314540059347	-	UGAAGUCUACCAUUCUCUGACAAAUCGUC	159	4	1293	8	9	18	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7639344-7639773	Cluster_3939	Pocillopora_meandrina_HIv1___Sc0000013	7639344	7639773	430	185	77	0.0	-	UCUUCUACUGUUGUGUCUUGUGGAGCACUC	18	1	183	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7644064-7644890	Cluster_3940	Pocillopora_meandrina_HIv1___Sc0000013	7644064	7644890	827	290	47	0.0034482758620689655	-	UUCAUCUGUUUAAGCUUUGAAAUCUUUGC	98	1	284	0	0	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7647454-7648694	Cluster_3941	Pocillopora_meandrina_HIv1___Sc0000013	7647454	7648694	1241	11181	1403	0.9801448886503891	+	UCUGACUGACUAACAGGAUAUCUGCUUC	737	38	10874	27	33	74	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7757601-7758021	Cluster_3942	Pocillopora_meandrina_HIv1___Sc0000013	7757601	7758021	421	147	55	0.013605442176870748	-	UCCGGCUCGAAGGAAACUUUU	26	67	19	36	2	16	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7936755-7937169	Cluster_3943	Pocillopora_meandrina_HIv1___Sc0000013	7936755	7937169	415	73	18	0.0684931506849315	-	CCUGACUGGCGCCGACACA	32	70	1	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8128876-8129305	Cluster_3944	Pocillopora_meandrina_HIv1___Sc0000013	8128876	8129305	430	663	75	0.007541478129713424	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	286	0	656	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8130059-8130655	Cluster_3945	Pocillopora_meandrina_HIv1___Sc0000013	8130059	8130655	597	5767	508	0.0031212068666551067	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	887	11	5719	4	3	10	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8200834-8201251	Cluster_3946	Pocillopora_meandrina_HIv1___Sc0000013	8200834	8201251	418	540	26	0.0	-	CUUGAAGCGGUUGGA	348	540	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8279316-8279798	Cluster_3947	Pocillopora_meandrina_HIv1___Sc0000013	8279316	8279798	483	3121	328	0.0	-	CAUAGACGCAAGCUCAAUACACA	1043	177	202	122	1057	1260	303	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8350706-8351129	Cluster_3948	Pocillopora_meandrina_HIv1___Sc0000013	8350706	8351129	424	385	44	1.0	+	UGUCAGUGAAGUUGAUAUGAGU	107	57	6	28	174	12	108	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8717884-8718310	Cluster_3949	Pocillopora_meandrina_HIv1___Sc0000013	8717884	8718310	427	107	31	0.0	-	AAGUAUAGCACUGUGUAUUCUUUAGGAG	23	0	101	0	0	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8718535-8719582	Cluster_3950	Pocillopora_meandrina_HIv1___Sc0000013	8718535	8719582	1048	1208	369	0.3882450331125828	.	UGAGAAUUCUGGAAUUUAUGACAACUCC	63	18	1123	12	14	12	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8784465-8784953	Cluster_3951	Pocillopora_meandrina_HIv1___Sc0000013	8784465	8784953	489	448	185	0.8191964285714286	+	UAUGUGAUGCGGUGACCAGACAACGGUGGC	20	5	390	9	9	12	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8948806-8949223	Cluster_3952	Pocillopora_meandrina_HIv1___Sc0000013	8948806	8949223	418	159	18	1.0	+	CAGCACUCUGCAAAGACG	77	147	12	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9076660-9078397	Cluster_3953	Pocillopora_meandrina_HIv1___Sc0000013	9076660	9078397	1738	2745	1105	0.040437158469945354	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	86	17	2619	8	18	42	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9180156-9180831	Cluster_3954	Pocillopora_meandrina_HIv1___Sc0000013	9180156	9180831	676	8189	513	0.002930760776651606	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2254	17	8051	4	50	35	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9180909-9181394	Cluster_3955	Pocillopora_meandrina_HIv1___Sc0000013	9180909	9181394	486	364	227	0.21703296703296704	.	UAUUCUUGCUCUGCUGGCAGCUCCACUA	8	7	289	5	6	23	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9289978-9290404	Cluster_3956	Pocillopora_meandrina_HIv1___Sc0000013	9289978	9290404	427	203	39	0.9950738916256158	+	UAAUCGUUGGCUUUUUCUCGAGGCGUG	71	0	202	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9301023-9301651	Cluster_3957	Pocillopora_meandrina_HIv1___Sc0000013	9301023	9301651	629	3504	383	0.9691780821917808	+	UCGUAUUCUUUUCCAUCCUCGCCGAAC	892	13	3261	31	76	44	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9512978-9513756	Cluster_3958	Pocillopora_meandrina_HIv1___Sc0000013	9512978	9513756	779	609	262	0.6880131362889984	.	UUUGCAGGAAAUGUGAUUUAAAAGGAAAUGU	44	5	543	2	2	23	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9530869-9531293	Cluster_3959	Pocillopora_meandrina_HIv1___Sc0000013	9530869	9531293	425	74	24	0.0	-	GCUUGAUGUACGCGAAAGAAAUUCGA	19	2	71	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9653262-9653875	Cluster_3960	Pocillopora_meandrina_HIv1___Sc0000013	9653262	9653875	614	1975	329	0.053670886075949366	-	UGAGACUCUUUGAAGCGCAACCCGCACA	537	13	1883	8	8	31	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9815081-9815510	Cluster_3961	Pocillopora_meandrina_HIv1___Sc0000013	9815081	9815510	430	177	57	1.0	+	AAGUGAUUAAAGAUGAGCUGAACCCAGUG	27	4	170	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:12879-13299	Cluster_3962	Pocillopora_meandrina_HIv1___Sc0000014	12879	13299	421	79	22	0.0	-	CUUGAAUCGUUUGGACUGCGCCA	20	5	0	12	26	27	9	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:45179-45605	Cluster_3963	Pocillopora_meandrina_HIv1___Sc0000014	45179	45605	427	230	160	0.4434782608695652	.	UUUCUGUAUGUUUAACUUCUAAUAAGUU	8	83	60	44	24	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:84566-84988	Cluster_3964	Pocillopora_meandrina_HIv1___Sc0000014	84566	84988	423	402	73	0.7910447761194029	.	UGUGCAGGUAGAGCAGAGGUUA	69	62	5	124	141	56	14	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:96277-96699	Cluster_3965	Pocillopora_meandrina_HIv1___Sc0000014	96277	96699	423	377	112	0.1856763925729443	-	UUCGCGUCUGAAGCUGUUAGAGU	98	50	43	23	60	195	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:137727-138140	Cluster_3966	Pocillopora_meandrina_HIv1___Sc0000014	137727	138140	414	120	50	0.16666666666666666	-	AAUGAUUUCGGAGUGUAUGCG	19	58	0	47	8	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:428538-428967	Cluster_3967	Pocillopora_meandrina_HIv1___Sc0000014	428538	428967	430	125	34	0.0	-	UUAGUAACUUCUUGGCUAUCUUUACAGCAU	42	0	125	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:465769-467126	Cluster_3968	Pocillopora_meandrina_HIv1___Sc0000014	465769	467126	1358	1890	546	0.5804232804232804	.	UGUGUAAUCGUUCGGUGUAAUCUUGUGUU	111	7	1830	7	10	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:467823-468252	Cluster_3969	Pocillopora_meandrina_HIv1___Sc0000014	467823	468252	430	346	50	0.0	-	UUCCAUGACUCUGUUUAAACGAAAACGAAC	207	0	345	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:489097-489920	Cluster_3970	Pocillopora_meandrina_HIv1___Sc0000014	489097	489920	824	355	181	0.056338028169014086	-	UGAAUCUGGAUAUUGCUCUCCUCUUUAUGUC	25	4	338	2	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:489970-490592	Cluster_3971	Pocillopora_meandrina_HIv1___Sc0000014	489970	490592	623	785	307	0.1159235668789809	-	UUUAACACAGUUGGCUUUAUGAAUUUCCCU	37	14	738	3	9	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:512220-512756	Cluster_3972	Pocillopora_meandrina_HIv1___Sc0000014	512220	512756	537	2671	519	1.0	+	GUGAUGUAUAAUUCAGAGACAUUU	453	107	1503	112	76	149	724	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:516209-516686	Cluster_3973	Pocillopora_meandrina_HIv1___Sc0000014	516209	516686	478	266	112	1.0	+	UUGAUAUCGAAUCCAGAAACAGGU	26	43	67	41	25	35	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:660805-661232	Cluster_3974	Pocillopora_meandrina_HIv1___Sc0000014	660805	661232	428	76	21	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	22	1	74	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:700715-701118	Cluster_3975	Pocillopora_meandrina_HIv1___Sc0000014	700715	701118	404	132	80	1.0	+	CAUGUGACUGAGGGGGCA	14	57	22	25	10	13	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:701482-702103	Cluster_3976	Pocillopora_meandrina_HIv1___Sc0000014	701482	702103	622	4246	696	1.0	+	AAUUCGUAGUGGUAUUCUGAUGUGA	228	1066	1863	264	236	376	441	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:764543-764990	Cluster_3977	Pocillopora_meandrina_HIv1___Sc0000014	764543	764990	448	2153	206	1.0	+	UAGGGCUGAGAUGAAGUCUCUCGUU	269	687	607	66	310	85	398	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:805530-805956	Cluster_3978	Pocillopora_meandrina_HIv1___Sc0000014	805530	805956	427	298	104	0.8489932885906041	+	UUUUGUAUCUGGAUUCCUUGACAUCU	32	6	248	6	11	15	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:806678-807105	Cluster_3979	Pocillopora_meandrina_HIv1___Sc0000014	806678	807105	428	121	41	0.9586776859504132	+	AAGGAUACCACAUUCGGAAGUAUAAGAGA	39	1	111	5	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:838169-838597	Cluster_3980	Pocillopora_meandrina_HIv1___Sc0000014	838169	838597	429	169	76	0.005917159763313609	-	UCUUUCGUCUGUUGUCGAUAAAUGAGAGC	30	2	165	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:881327-881750	Cluster_3981	Pocillopora_meandrina_HIv1___Sc0000014	881327	881750	424	302	45	0.08278145695364239	-	UGUGACAAGAUUUUUCCUGAUGU	104	1	20	7	16	162	96	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1099106-1099730	Cluster_3982	Pocillopora_meandrina_HIv1___Sc0000014	1099106	1099730	625	987	416	0.04154002026342452	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	31	8	941	4	2	12	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1099751-1100330	Cluster_3983	Pocillopora_meandrina_HIv1___Sc0000014	1099751	1100330	580	536	273	0.14365671641791045	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	25	5	477	5	3	8	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1100711-1101460	Cluster_3984	Pocillopora_meandrina_HIv1___Sc0000014	1100711	1101460	750	756	238	0.01984126984126984	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	61	2	745	1	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1121523-1122112	Cluster_3985	Pocillopora_meandrina_HIv1___Sc0000014	1121523	1122112	590	190	80	0.8210526315789474	+	AAUUGACUGCUUUGAGAUUUUUAUUGAGA	31	1	185	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1134417-1135055	Cluster_3986	Pocillopora_meandrina_HIv1___Sc0000014	1134417	1135055	639	535	262	0.5570093457943925	.	CAGGUUCUGAGCCUUCUGACUGACCAGGUC	60	5	507	8	4	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1307073-1307494	Cluster_3987	Pocillopora_meandrina_HIv1___Sc0000014	1307073	1307494	422	158	86	0.9620253164556962	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	19	0	150	2	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1451321-1451767	Cluster_3988	Pocillopora_meandrina_HIv1___Sc0000014	1451321	1451767	447	508	85	0.531496062992126	.	UCGGUUAUAAGACGCACCCUGAAUUUUU	149	3	500	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1452037-1452460	Cluster_3989	Pocillopora_meandrina_HIv1___Sc0000014	1452037	1452460	424	138	24	0.050724637681159424	-	UUAACUGGUAGUCAUGACGUCUCC	50	12	17	0	2	3	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1658721-1659143	Cluster_3990	Pocillopora_meandrina_HIv1___Sc0000014	1658721	1659143	423	193	90	0.9326424870466321	+	UGUAGACGUUUGAUCAGUAUAUCAUGAU	12	1	185	2	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1698695-1699129	Cluster_3991	Pocillopora_meandrina_HIv1___Sc0000014	1698695	1699129	435	538	80	0.9776951672862454	+	UCAGUAGAACACAACUGUCAAGAAGCCACA	179	29	499	3	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1701276-1701705	Cluster_3992	Pocillopora_meandrina_HIv1___Sc0000014	1701276	1701705	430	234	52	1.0	+	UGGAGACUGUUUCAAUUUCUCAUCGAAAUA	120	2	222	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1705301-1705720	Cluster_3993	Pocillopora_meandrina_HIv1___Sc0000014	1705301	1705720	420	119	54	1.0	+	UCCGAUGUCCAUGUCAUGAUUAACAGAAG	15	0	118	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1708938-1710452	Cluster_3994	Pocillopora_meandrina_HIv1___Sc0000014	1708938	1710452	1515	3352	591	0.9979116945107399	+	UAAUAGAAUUUUCAUCAACUUCAAGAGU	683	21	3269	14	12	29	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1715489-1716088	Cluster_3995	Pocillopora_meandrina_HIv1___Sc0000014	1715489	1716088	600	669	225	0.9985052316890882	+	UGAAGUCCAGAUCAUCUUGCUGUAGAAGUU	198	8	646	2	8	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1718239-1718664	Cluster_3996	Pocillopora_meandrina_HIv1___Sc0000014	1718239	1718664	426	107	39	1.0	+	UCCGAUACUGAACACUCCGAUCACUG	28	0	105	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1719216-1719928	Cluster_3997	Pocillopora_meandrina_HIv1___Sc0000014	1719216	1719928	713	1180	281	1.0	+	GGCUUCUAGGACUUCUAUGUGGAUGGCU	101	12	1097	6	21	20	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1720058-1720588	Cluster_3998	Pocillopora_meandrina_HIv1___Sc0000014	1720058	1720588	531	463	127	0.9978401727861771	+	UGAAUUCUCUGACCAAGACGAUAAGAUUGGC	103	4	398	0	0	57	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1721685-1722209	Cluster_3999	Pocillopora_meandrina_HIv1___Sc0000014	1721685	1722209	525	353	143	1.0	+	UGCUUUAUCUCUAGAGCCAUGAACUUGAAG	32	3	336	0	4	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1725116-1725543	Cluster_4000	Pocillopora_meandrina_HIv1___Sc0000014	1725116	1725543	428	186	77	1.0	+	UGUAUCUGUAGUGCAUCCUUCGAUUGAGU	16	0	179	3	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1726851-1727274	Cluster_4001	Pocillopora_meandrina_HIv1___Sc0000014	1726851	1727274	424	140	48	1.0	+	UGCAAGUUCUGGUUUGGUUUUGUUUGAAUC	45	3	131	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1730237-1730740	Cluster_4002	Pocillopora_meandrina_HIv1___Sc0000014	1730237	1730740	504	2136	427	0.9976591760299626	+	UCUUCUCGAUCUGGCUAAAGUCUGUGUC	186	5	2088	3	3	8	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1736983-1737940	Cluster_4003	Pocillopora_meandrina_HIv1___Sc0000014	1736983	1737940	958	1778	362	0.9910011248593926	+	UGGAAUUGGUAGUUCAUUAAAAGCAGGUG	274	12	1690	3	7	10	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1740024-1742285	Cluster_4004	Pocillopora_meandrina_HIv1___Sc0000014	1740024	1742285	2262	6816	2145	0.9215082159624414	+	UAUGUACGAUUUUAACUGGAAGAAACGUU	183	152	6323	33	46	109	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1750913-1751877	Cluster_4005	Pocillopora_meandrina_HIv1___Sc0000014	1750913	1751877	965	785	321	0.8662420382165605	+	UGUUCCAAUAUUUUUCGGUCGAGAUCCACU	54	14	720	21	11	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1751983-1752677	Cluster_4006	Pocillopora_meandrina_HIv1___Sc0000014	1751983	1752677	695	2090	500	0.8866028708133972	+	UGUAUGGUUUCUGCUCGUUCUCUCCACA	387	45	1897	12	18	60	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1753796-1754299	Cluster_4007	Pocillopora_meandrina_HIv1___Sc0000014	1753796	1754299	504	1645	132	0.9993920972644377	+	UCAACCAAGCCUUAGAUCAUUCAGUCUGUG	328	5	1616	2	7	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1761367-1762938	Cluster_4008	Pocillopora_meandrina_HIv1___Sc0000014	1761367	1762938	1572	2292	1011	0.9336823734729494	+	UAGGAUCAUAGUCUUUGAACUCCGACGG	96	15	2094	9	11	88	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1763494-1764344	Cluster_4009	Pocillopora_meandrina_HIv1___Sc0000014	1763494	1764344	851	1579	505	0.902469917669411	+	UGAUUUAUAGGAGUAAUGAGACAUUAU	131	19	1461	19	20	15	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1766207-1766925	Cluster_4010	Pocillopora_meandrina_HIv1___Sc0000014	1766207	1766925	719	1100	249	0.9354545454545454	+	UGCAUCAUCGAUUCGUAAACUGUGCCAAUG	339	4	1069	1	3	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1770787-1771217	Cluster_4011	Pocillopora_meandrina_HIv1___Sc0000014	1770787	1771217	431	601	82	0.9900166389351082	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	258	0	596	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1775329-1775777	Cluster_4012	Pocillopora_meandrina_HIv1___Sc0000014	1775329	1775777	449	1051	154	0.8810656517602283	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	393	18	1010	3	3	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1778202-1778631	Cluster_4013	Pocillopora_meandrina_HIv1___Sc0000014	1778202	1778631	430	335	41	1.0	+	UUCCAUGACUCUGUUUAAACGAAAACGAAC	211	0	332	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1779605-1780027	Cluster_4014	Pocillopora_meandrina_HIv1___Sc0000014	1779605	1780027	423	114	44	0.9736842105263158	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	15	0	110	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1780550-1781905	Cluster_4015	Pocillopora_meandrina_HIv1___Sc0000014	1780550	1781905	1356	1406	545	0.9118065433854907	+	UCCGUGACACAACGACUUUGCCUUGCUU	106	12	1348	4	4	13	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1786397-1786933	Cluster_4016	Pocillopora_meandrina_HIv1___Sc0000014	1786397	1786933	537	225	101	0.6666666666666666	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	42	3	207	1	1	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1788267-1788697	Cluster_4017	Pocillopora_meandrina_HIv1___Sc0000014	1788267	1788697	431	339	38	1.0	+	UGUAAUCGUAACGUUCUUUCAUGAUAAA	62	4	330	1	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1791429-1791857	Cluster_4018	Pocillopora_meandrina_HIv1___Sc0000014	1791429	1791857	429	115	46	1.0	+	GGGUUCAAGGAUUUUAGUGAACAGCCUAGG	17	0	111	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1792562-1793420	Cluster_4019	Pocillopora_meandrina_HIv1___Sc0000014	1792562	1793420	859	522	205	1.0	+	UCCUGAACCUGUUGGAAAGCCAAAUCCAC	41	2	506	4	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1795665-1796092	Cluster_4020	Pocillopora_meandrina_HIv1___Sc0000014	1795665	1796092	428	198	83	1.0	+	UGAUGUUGUUGGGAUGAAGUCUUCAAUG	41	3	193	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1796852-1797273	Cluster_4021	Pocillopora_meandrina_HIv1___Sc0000014	1796852	1797273	422	199	95	0.9949748743718593	+	UCUGAUCUGUCACGGAUGUGGUGUACGC	23	3	194	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1798773-1799503	Cluster_4022	Pocillopora_meandrina_HIv1___Sc0000014	1798773	1799503	731	689	102	0.9680696661828737	+	UGAUUGAUAAACCGGAUGCUGUAGACGU	391	5	674	5	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1799524-1799972	Cluster_4023	Pocillopora_meandrina_HIv1___Sc0000014	1799524	1799972	449	1250	147	0.1928	-	AAGUAAACGAGGUGUUUAAUGUGCGACUCC	444	12	1209	2	0	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1800622-1801148	Cluster_4024	Pocillopora_meandrina_HIv1___Sc0000014	1800622	1801148	527	458	214	0.6965065502183406	.	CUAUUUAUAAUGUUUAAAGCUCUGUUUUGG	17	15	415	1	7	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1814534-1816184	Cluster_4025	Pocillopora_meandrina_HIv1___Sc0000014	1814534	1816184	1651	3216	906	0.9928482587064676	+	UGAAUCUCAUCUUAUCUUCUACUUCAACAUC	184	53	3071	23	13	17	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1816807-1817310	Cluster_4026	Pocillopora_meandrina_HIv1___Sc0000014	1816807	1817310	504	268	107	0.9365671641791045	+	UGAUAUUGUACAAUCUGGCUUUUUUUGAC	42	1	242	2	3	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1818058-1818483	Cluster_4027	Pocillopora_meandrina_HIv1___Sc0000014	1818058	1818483	426	154	60	0.9935064935064936	+	UGCAUUUCUCUGAACCAAACUCCACAAAGUG	17	1	153	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1819524-1820202	Cluster_4028	Pocillopora_meandrina_HIv1___Sc0000014	1819524	1820202	679	265	135	0.9962264150943396	+	UUCAUGAUUUCUUCUACUUUGAAUGUGGC	10	2	252	2	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1823340-1825380	Cluster_4029	Pocillopora_meandrina_HIv1___Sc0000014	1823340	1825380	2041	6863	1637	0.5177036281509544	.	AAAUCUCCUAAAUCUUUGACACAAAUAGA	353	75	5662	43	134	471	478	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1835687-1836563	Cluster_4030	Pocillopora_meandrina_HIv1___Sc0000014	1835687	1836563	877	1283	382	0.5448168355416991	.	UACGUUGCUUGACCUCAUCAUUUUUGG	73	16	1214	10	5	7	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1839328-1839753	Cluster_4031	Pocillopora_meandrina_HIv1___Sc0000014	1839328	1839753	426	91	37	0.978021978021978	+	UGUGUAGAUAUGUCUUUUGGACAGGA	31	1	88	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1849056-1849484	Cluster_4032	Pocillopora_meandrina_HIv1___Sc0000014	1849056	1849484	429	142	42	0.9225352112676056	+	UUGGAUUUGCGUAAAAAAGUAAAAAAUGC	62	0	140	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1849835-1850267	Cluster_4033	Pocillopora_meandrina_HIv1___Sc0000014	1849835	1850267	433	306	104	0.9836601307189542	+	UUAGACGAUCUAGCUUCUGACUUGGUAGA	18	1	301	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1858886-1859307	Cluster_4034	Pocillopora_meandrina_HIv1___Sc0000014	1858886	1859307	422	147	103	0.8163265306122449	+	UAACACUAUAAACAUUCUGAGGGCGAUU	8	2	134	0	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1859321-1859749	Cluster_4035	Pocillopora_meandrina_HIv1___Sc0000014	1859321	1859749	429	180	88	0.8888888888888888	+	UGAACGUAUAGCCAUCCAGUUGAACUUG	14	1	174	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1872858-1873287	Cluster_4036	Pocillopora_meandrina_HIv1___Sc0000014	1872858	1873287	430	232	81	0.9956896551724138	+	UAGGAUGUAUCUGGACGUGUUCUGCACAGU	49	5	223	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1893198-1893619	Cluster_4037	Pocillopora_meandrina_HIv1___Sc0000014	1893198	1893619	422	194	28	1.0	+	AAGACUACAAAUUGCACAUGCC	72	20	2	20	117	32	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1980438-1980860	Cluster_4038	Pocillopora_meandrina_HIv1___Sc0000014	1980438	1980860	423	146	73	0.9452054794520548	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	17	0	136	2	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1981954-1982372	Cluster_4039	Pocillopora_meandrina_HIv1___Sc0000014	1981954	1982372	419	120	73	0.8583333333333333	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	12	3	102	1	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1982845-1983268	Cluster_4040	Pocillopora_meandrina_HIv1___Sc0000014	1982845	1983268	424	156	83	0.8846153846153846	+	UACUGGAAUAAUAACUUUACGAUCAACA	15	2	149	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1983712-1984120	Cluster_4041	Pocillopora_meandrina_HIv1___Sc0000014	1983712	1984120	409	128	65	0.90625	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	11	0	121	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2079375-2079803	Cluster_4042	Pocillopora_meandrina_HIv1___Sc0000014	2079375	2079803	429	354	40	0.002824858757062147	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	268	0	350	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2079918-2080342	Cluster_4043	Pocillopora_meandrina_HIv1___Sc0000014	2079918	2080342	425	167	97	0.6586826347305389	.	AAUUACCUGAUUUCGAUUUUCGUCAAAUG	17	4	141	0	1	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2108222-2108651	Cluster_4044	Pocillopora_meandrina_HIv1___Sc0000014	2108222	2108651	430	213	46	1.0	+	AUGGAUGAUGAGAAGGAGAUGCUCUGAGG	66	27	166	10	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2117321-2117735	Cluster_4045	Pocillopora_meandrina_HIv1___Sc0000014	2117321	2117735	415	119	64	0.09243697478991597	-	UCCGUGACUUGAUGGAGAACGAAUAAUUCG	16	7	103	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2121053-2121458	Cluster_4046	Pocillopora_meandrina_HIv1___Sc0000014	2121053	2121458	406	92	44	0.0	-	UGCUGUUUUGAUCUGCAAGAUUGGUGAUGG	15	8	77	1	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2179577-2180006	Cluster_4047	Pocillopora_meandrina_HIv1___Sc0000014	2179577	2180006	430	211	52	0.909952606635071	+	UAAUCGUUGGCUUUUUCUCGAGACGUGAGC	71	9	198	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2259034-2259461	Cluster_4048	Pocillopora_meandrina_HIv1___Sc0000014	2259034	2259461	428	215	109	0.31627906976744186	.	UUCAAUCUGAUCCGUGUAACUGGGACUU	14	1	164	14	13	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2366038-2366132	Cluster_4049	Pocillopora_meandrina_HIv1___Sc0000014	2366038	2366132	95	1393	67	0.0	-	AUUUUUAGCCCGCGGAAGUUGC	641	54	1	97	930	301	10	22	Y	ami-nve-F-miR-2025-3p_Acropora_millepora_Praher_et_al._2021_NA;Adi-Mir-2025_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2025-3p;_nve-miR-2025-3p;adi-nve-F-miR-2025_Acropora_digitifera__Praher_et_al._2021_NA
Pocillopora_meandrina_HIv1___Sc0000014:2594743-2594833	Cluster_4050	Pocillopora_meandrina_HIv1___Sc0000014	2594743	2594833	91	329	44	0.9969604863221885	+	CGUGGUGCGUUAUUGUUUCGGU	54	60	0	17	167	49	36	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000014:2614195-2614653	Cluster_4051	Pocillopora_meandrina_HIv1___Sc0000014	2614195	2614653	459	302	196	1.0	+	GCAUAUUCUGACCCAAUUUUUGGACCCGUC	7	65	123	42	29	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2712648-2713129	Cluster_4052	Pocillopora_meandrina_HIv1___Sc0000014	2712648	2713129	482	4274	232	0.9932147870846981	+	GGCGCCGUAGCUCAGUUGG	1963	4098	42	52	10	52	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2718186-2718609	Cluster_4053	Pocillopora_meandrina_HIv1___Sc0000014	2718186	2718609	424	248	168	0.008064516129032258	-	GACGUGUACAUAGAAGAGACAGAUU	8	49	133	21	14	16	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2765844-2766270	Cluster_4054	Pocillopora_meandrina_HIv1___Sc0000014	2765844	2766270	427	140	24	0.007142857142857143	-	UACCGAUUUAUAAGUGAGCAGCUCUAG	31	1	137	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3098235-3098724	Cluster_4055	Pocillopora_meandrina_HIv1___Sc0000014	3098235	3098724	490	577	140	0.0	-	GGGAUGAAUGGGAAUCUUCUCUCUGAGCAUA	114	44	441	15	15	27	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3098874-3099419	Cluster_4056	Pocillopora_meandrina_HIv1___Sc0000014	3098874	3099419	546	614	243	0.08631921824104234	-	GGGAUGAAUGGGAAUCUUCUCUCUGAGCAUA	81	25	446	9	25	44	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3282435-3282865	Cluster_4057	Pocillopora_meandrina_HIv1___Sc0000014	3282435	3282865	431	96	35	0.9375	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	0	93	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3337468-3337898	Cluster_4058	Pocillopora_meandrina_HIv1___Sc0000014	3337468	3337898	431	197	79	0.005076142131979695	-	UUUGAUUGACGUACGGUAUUUGAGACGC	23	1	188	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3441053-3441973	Cluster_4059	Pocillopora_meandrina_HIv1___Sc0000014	3441053	3441973	921	908	280	0.9691629955947136	+	UAUUCGCCGAUGAGGAUAUUCUUUGCCCUUU	62	3	845	8	16	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3513949-3514371	Cluster_4060	Pocillopora_meandrina_HIv1___Sc0000014	3513949	3514371	423	255	172	0.0	-	GAGGAUCUUAGCGACUGAGAGUU	7	58	121	12	14	21	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3554588-3555007	Cluster_4061	Pocillopora_meandrina_HIv1___Sc0000014	3554588	3555007	420	168	32	0.19047619047619047	-	UCUGACGAAGGGCUGACA	35	86	0	62	19	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3717108-3717573	Cluster_4062	Pocillopora_meandrina_HIv1___Sc0000014	3717108	3717573	466	458	144	0.980349344978166	+	UCUUCGGAGGCGUGGGUUC	42	305	45	44	37	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3844744-3845165	Cluster_4063	Pocillopora_meandrina_HIv1___Sc0000014	3844744	3845165	422	143	21	0.993006993006993	+	UGGGCUGAAAUCAUACACGUGA	32	6	2	44	37	35	19	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3912992-3913410	Cluster_4064	Pocillopora_meandrina_HIv1___Sc0000014	3912992	3913410	419	80	6	0.0625	-	AACGAAGUACAAGUGGUAA	75	75	2	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4130670-4131078	Cluster_4065	Pocillopora_meandrina_HIv1___Sc0000014	4130670	4131078	409	97	54	0.5154639175257731	.	UAGGUAAAGUCUUUCUGUUAACAGAGUU	12	4	83	0	1	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4138770-4139175	Cluster_4066	Pocillopora_meandrina_HIv1___Sc0000014	4138770	4139175	406	232	186	0.01293103448275862	-	GCAAGUACUCUGUUUGGAUUGGA	4	51	97	18	22	27	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4288484-4288910	Cluster_4067	Pocillopora_meandrina_HIv1___Sc0000014	4288484	4288910	427	194	42	0.26288659793814434	.	AGGGACUGAAACAUCGACUGAAGACG	40	4	166	5	0	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4558169-4559414	Cluster_4068	Pocillopora_meandrina_HIv1___Sc0000014	4558169	4559414	1246	1264	475	0.0680379746835443	-	UACAAACUGCAAAACGGUCUCACCUGGU	100	9	1202	10	3	7	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4559644-4560080	Cluster_4069	Pocillopora_meandrina_HIv1___Sc0000014	4559644	4560080	437	1334	280	0.04422788605697151	-	UGAUCUGUCGUGACUCUGAAUUAAGUUC	152	36	1249	2	5	17	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4560279-4560706	Cluster_4070	Pocillopora_meandrina_HIv1___Sc0000014	4560279	4560706	428	129	43	0.046511627906976744	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	67	1	123	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4560790-4561216	Cluster_4071	Pocillopora_meandrina_HIv1___Sc0000014	4560790	4561216	427	295	129	0.10847457627118644	-	UCCAAUCACACACAGUUCUCCUGCGGC	66	2	269	2	1	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4561591-4562015	Cluster_4072	Pocillopora_meandrina_HIv1___Sc0000014	4561591	4562015	425	262	122	0.05725190839694656	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	22	3	244	0	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4664447-4664871	Cluster_4073	Pocillopora_meandrina_HIv1___Sc0000014	4664447	4664871	425	126	64	0.9523809523809523	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	18	0	121	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4665958-4666384	Cluster_4074	Pocillopora_meandrina_HIv1___Sc0000014	4665958	4666384	427	155	87	0.8838709677419355	+	UGUAUUGAUUGAACUUGUCGGUUGACC	15	1	143	3	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4666855-4667276	Cluster_4075	Pocillopora_meandrina_HIv1___Sc0000014	4666855	4667276	422	170	86	0.8764705882352941	+	UACUGGAAUAAUAACUUUACGAUCAACA	17	2	161	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4684319-4684737	Cluster_4076	Pocillopora_meandrina_HIv1___Sc0000014	4684319	4684737	419	150	101	0.9933333333333333	+	UGGUGCCAGCAAUGUAGACU	7	23	63	20	13	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4686843-4687245	Cluster_4077	Pocillopora_meandrina_HIv1___Sc0000014	4686843	4687245	403	103	73	1.0	+	AGUGAAUGGGGUGGAACUGCU	5	26	39	13	9	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4812850-4813466	Cluster_4078	Pocillopora_meandrina_HIv1___Sc0000014	4812850	4813466	617	567	243	0.6878306878306878	.	AAAGAGCUGAAAAAAAGAAUGUUUC	139	23	464	17	5	16	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4814569-4814996	Cluster_4079	Pocillopora_meandrina_HIv1___Sc0000014	4814569	4814996	428	91	8	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	57	0	90	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4815922-4816551	Cluster_4080	Pocillopora_meandrina_HIv1___Sc0000014	4815922	4816551	630	3323	290	0.14474872103520914	-	UUGAAUGUUGCGAAGCUCUUUGUCCAAA	1110	36	3159	5	18	72	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4993242-4993667	Cluster_4081	Pocillopora_meandrina_HIv1___Sc0000014	4993242	4993667	426	91	32	0.01098901098901099	-	UGUGUAGAUAUGUCUUUUGGACAGGA	21	0	90	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5048490-5048913	Cluster_4082	Pocillopora_meandrina_HIv1___Sc0000014	5048490	5048913	424	535	45	0.0	-	UCUCAUAAAGAGCGUAAAGGGGC	256	13	29	7	15	416	55	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5075505-5075932	Cluster_4083	Pocillopora_meandrina_HIv1___Sc0000014	5075505	5075932	428	402	139	0.0	-	GUUUAUGAUGACAUACAGAUCUGAAA	80	71	275	14	9	24	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5082612-5083021	Cluster_4084	Pocillopora_meandrina_HIv1___Sc0000014	5082612	5083021	410	102	69	1.0	+	CUUGUUAUCCAGGACAAAGAGAAGGCU	6	14	55	3	12	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5335148-5335674	Cluster_4085	Pocillopora_meandrina_HIv1___Sc0000014	5335148	5335674	527	848	372	0.00589622641509434	-	GUUUCUACUGUUUGCCUGUCAAU	28	112	485	30	49	65	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5520891-5521316	Cluster_4086	Pocillopora_meandrina_HIv1___Sc0000014	5520891	5521316	426	1941	51	0.9974240082431737	+	CGGCCUGAAAAAAAAAAAA	578	1396	277	123	66	58	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5733165-5733582	Cluster_4087	Pocillopora_meandrina_HIv1___Sc0000014	5733165	5733582	418	125	49	0.416	.	UGAGCCGAUCCUGACGCAGCA	36	30	18	44	21	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5977390-5977816	Cluster_4088	Pocillopora_meandrina_HIv1___Sc0000014	5977390	5977816	427	130	50	0.8769230769230769	+	UGUACUGUUUGUAUUUUUUUUCCUGGG	31	2	124	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5985949-5987921	Cluster_4089	Pocillopora_meandrina_HIv1___Sc0000014	5985949	5987921	1973	5843	1505	0.9378743795995208	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	516	29	5597	19	25	53	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5988467-5988985	Cluster_4090	Pocillopora_meandrina_HIv1___Sc0000014	5988467	5988985	519	320	137	0.971875	+	UAUUAUACUGCGGGUUACUCAGCCAAGC	17	1	301	1	3	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6119359-6119779	Cluster_4091	Pocillopora_meandrina_HIv1___Sc0000014	6119359	6119779	421	195	75	0.6461538461538462	.	AAGCCUGUUUCGUGAAUCGCA	32	110	9	67	5	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6393303-6393732	Cluster_4092	Pocillopora_meandrina_HIv1___Sc0000014	6393303	6393732	430	236	66	1.0	+	UGCAUAGUGCAGCAAAUUCCAUC	34	13	108	3	32	60	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6491369-6491793	Cluster_4093	Pocillopora_meandrina_HIv1___Sc0000014	6491369	6491793	425	197	71	0.9898477157360406	+	CUCUAUGAAAGAUUUGCACACAAUU	63	17	116	10	6	12	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6570607-6571539	Cluster_4094	Pocillopora_meandrina_HIv1___Sc0000014	6570607	6571539	933	909	270	0.9658965896589659	+	AGAACUUGGAGGAGCAAAAAGAAUUCCA	76	28	774	30	13	33	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6659357-6659784	Cluster_4095	Pocillopora_meandrina_HIv1___Sc0000014	6659357	6659784	428	133	65	0.17293233082706766	-	GCGUUUAAAUUCUCUUCUGGCUCCCAGG	32	1	121	1	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6660034-6660525	Cluster_4096	Pocillopora_meandrina_HIv1___Sc0000014	6660034	6660525	492	2117	246	0.7269721303731695	.	UUUGGGAUCAAAGACGAAACGAGU	473	22	757	158	30	315	835	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6909064-6910206	Cluster_4097	Pocillopora_meandrina_HIv1___Sc0000014	6909064	6910206	1143	15687	1309	0.022120226939504047	-	UUUGUAGGCUCUAACAGUACAUUGUU	4452	1431	13941	53	55	64	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7024208-7024737	Cluster_4098	Pocillopora_meandrina_HIv1___Sc0000014	7024208	7024737	530	2567	408	0.958706661472536	+	UGCUUGAAUUCUGCCGAACUGUACUGC	866	16	2454	3	13	39	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7025303-7026004	Cluster_4099	Pocillopora_meandrina_HIv1___Sc0000014	7025303	7026004	702	271	134	0.922509225092251	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	35	3	254	1	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7027231-7027663	Cluster_4100	Pocillopora_meandrina_HIv1___Sc0000014	7027231	7027663	433	284	159	0.8345070422535211	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	35	5	254	0	3	2	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7060991-7061421	Cluster_4101	Pocillopora_meandrina_HIv1___Sc0000014	7060991	7061421	431	1014	120	0.0	-	UCCGUACUUAAAAUCCCUCACAUUGACUGU	425	11	986	4	6	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7087510-7087936	Cluster_4102	Pocillopora_meandrina_HIv1___Sc0000014	7087510	7087936	427	120	46	0.18333333333333332	-	UCUUGAAGCGUUAUCUGCCGGUCUGCC	10	9	100	8	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7124608-7125035	Cluster_4103	Pocillopora_meandrina_HIv1___Sc0000014	7124608	7125035	428	85	30	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCCUG	49	3	78	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7166952-7167381	Cluster_4104	Pocillopora_meandrina_HIv1___Sc0000014	7166952	7167381	430	17493	270	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCC	4169	35	17370	10	19	16	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7171665-7172100	Cluster_4105	Pocillopora_meandrina_HIv1___Sc0000014	7171665	7172100	436	1063	181	0.04797742238946378	-	UUUACAACGUCCGGCUUGACCAUUUACA	137	10	1011	9	7	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7209425-7209861	Cluster_4106	Pocillopora_meandrina_HIv1___Sc0000014	7209425	7209861	437	7345	234	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCCUG	3776	16	7316	1	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7239259-7239676	Cluster_4107	Pocillopora_meandrina_HIv1___Sc0000014	7239259	7239676	418	84	16	0.9880952380952381	+	CGGCUUGAAGAAAAAAAAAA	27	62	1	4	4	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7247934-7248430	Cluster_4108	Pocillopora_meandrina_HIv1___Sc0000014	7247934	7248430	497	283	67	0.9893992932862191	+	UGAUGCAAUCUGUUUCUGCAUGAGGGC	60	1	282	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7249045-7249473	Cluster_4109	Pocillopora_meandrina_HIv1___Sc0000014	7249045	7249473	429	159	79	0.9559748427672956	+	UAUUUUCAAACUGCGACGAUUGCUUCUGA	23	2	144	0	1	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7351086-7351515	Cluster_4110	Pocillopora_meandrina_HIv1___Sc0000014	7351086	7351515	430	150	37	0.006666666666666667	-	CUCUCUCGAACAUUUUACUAUUUAGGUA	31	4	139	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7526838-7527265	Cluster_4111	Pocillopora_meandrina_HIv1___Sc0000014	7526838	7527265	428	219	127	0.863013698630137	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	23	1	208	0	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7560462-7560889	Cluster_4112	Pocillopora_meandrina_HIv1___Sc0000014	7560462	7560889	428	110	34	1.0	+	UGUGCCAAAGGUUUAGAACGAAAGAACG	27	1	107	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7822908-7823325	Cluster_4113	Pocillopora_meandrina_HIv1___Sc0000014	7822908	7823325	418	546	5	1.0	+	CUGAGAUUGCUGUAGGCU	529	546	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8090277-8090759	Cluster_4114	Pocillopora_meandrina_HIv1___Sc0000014	8090277	8090759	483	2455	583	0.9991853360488798	+	ACUGGGAGAGAAUCAAACUGAUGCUU	216	391	1405	115	102	311	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8094498-8094979	Cluster_4115	Pocillopora_meandrina_HIv1___Sc0000014	8094498	8094979	482	604	181	1.0	+	ACUGGGAGAGAAUCAAACUGAUGGU	34	67	288	52	62	57	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8096152-8096633	Cluster_4116	Pocillopora_meandrina_HIv1___Sc0000014	8096152	8096633	482	378	214	0.9973544973544973	+	CUAGGAGAGAAUCCAGCUGAUGCUC	19	73	205	18	27	20	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8097363-8097787	Cluster_4117	Pocillopora_meandrina_HIv1___Sc0000014	8097363	8097787	425	223	89	1.0	+	AACCUCCUAAGUAAAUAACACCACU	23	35	112	18	16	24	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8099444-8099927	Cluster_4118	Pocillopora_meandrina_HIv1___Sc0000014	8099444	8099927	484	466	214	0.9978540772532188	+	AACCUCCUUCUUGGCAUCGCUGCAUGA	35	67	249	49	37	25	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8244722-8247613	Cluster_4119	Pocillopora_meandrina_HIv1___Sc0000014	8244722	8247613	2892	32069	5488	0.010352677040132215	-	UGGUCUCACGAACUUCUUUUUUUCAAGA	1552	187	31010	175	91	214	392	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8314929-8315357	Cluster_4120	Pocillopora_meandrina_HIv1___Sc0000014	8314929	8315357	429	107	37	0.009345794392523364	-	UCUGCCUCAUUUAAGAACUCUAGCCCAAGG	22	0	100	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8548730-8549222	Cluster_4121	Pocillopora_meandrina_HIv1___Sc0000014	8548730	8549222	493	7185	1344	0.9901183020180933	+	CAUAUACUAAAAUUGGAACGAUA	190	944	3789	507	508	820	617	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8675063-8675486	Cluster_4122	Pocillopora_meandrina_HIv1___Sc0000014	8675063	8675486	424	112	41	0.9910714285714286	+	UGAUUGCAGAGCACAGCAUUGCCACC	15	1	107	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8695815-8696220	Cluster_4123	Pocillopora_meandrina_HIv1___Sc0000014	8695815	8696220	406	118	83	0.00847457627118644	-	CACUGGCGUAGAACCAAGUUGGGACU	8	20	59	7	7	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9034685-9035113	Cluster_4124	Pocillopora_meandrina_HIv1___Sc0000014	9034685	9035113	429	2853	41	0.0	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAA	1211	793	1873	79	56	41	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9077979-9078682	Cluster_4125	Pocillopora_meandrina_HIv1___Sc0000014	9077979	9078682	704	550	232	0.06363636363636363	-	UGAAGACGUCGUUCCAAUUCCAAAGGUG	29	9	500	4	2	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9158628-9159057	Cluster_4126	Pocillopora_meandrina_HIv1___Sc0000014	9158628	9159057	430	826	149	0.986682808716707	+	AUUUAUCCAAAGAACAACGACUCGAGGUC	192	15	661	4	29	9	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9192245-9192674	Cluster_4127	Pocillopora_meandrina_HIv1___Sc0000014	9192245	9192674	430	3370	147	0.9958456973293769	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	1448	6	3350	2	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9355807-9356269	Cluster_4128	Pocillopora_meandrina_HIv1___Sc0000014	9355807	9356269	463	215	148	0.9813953488372092	+	GUGAAUUUGGAUAAACUGUGGUCCCU	5	37	114	16	19	23	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9356493-9356904	Cluster_4129	Pocillopora_meandrina_HIv1___Sc0000014	9356493	9356904	412	146	92	0.9726027397260274	+	UCAGUCGCAGAGCUGAAGAAA	7	43	50	21	8	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9365459-9365552	Cluster_4130	Pocillopora_meandrina_HIv1___Sc0000014	9365459	9365552	94	11095	130	0.0	-	UUCCAGAUUUGUAUCAUUGUUAU	7555	84	19	144	240	10206	402	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000014:9519073-9519500	Cluster_4131	Pocillopora_meandrina_HIv1___Sc0000014	9519073	9519500	428	149	74	0.7919463087248322	.	AAGGUCUGUUGAGCUGCACAAUCUCAGG	12	1	144	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:37646-38073	Cluster_4132	Pocillopora_meandrina_HIv1___Sc0000015	37646	38073	428	158	56	0.0379746835443038	-	UGAAAACUUAACAACGGACGGUAGGUCAUU	27	2	146	3	2	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:84063-84975	Cluster_4133	Pocillopora_meandrina_HIv1___Sc0000015	84063	84975	913	3334	503	0.5203959208158369	.	AUUUGUGAAAGAAAUGAUUUGGAGACCCC	462	26	3112	16	106	19	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:85347-85924	Cluster_4134	Pocillopora_meandrina_HIv1___Sc0000015	85347	85924	578	3569	404	0.5483328663491174	.	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	414	24	3386	9	21	30	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:86507-86955	Cluster_4135	Pocillopora_meandrina_HIv1___Sc0000015	86507	86955	449	1342	110	0.4403874813710879	.	UCAGUGUUUUGUAGUCCAAUGAAACUAAGC	287	18	1284	11	13	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:87437-88212	Cluster_4136	Pocillopora_meandrina_HIv1___Sc0000015	87437	88212	776	7387	434	0.09069987816434276	-	UCACCAUGAAAAGACUCUGGGCCAAAG	2366	12	7240	6	14	72	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:122288-123222	Cluster_4137	Pocillopora_meandrina_HIv1___Sc0000015	122288	123222	935	454	118	0.3920704845814978	.	AGAAAUACUGGCUGUCCAACUUAACAAAGA	45	7	415	3	3	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:309011-309465	Cluster_4138	Pocillopora_meandrina_HIv1___Sc0000015	309011	309465	455	1244	220	0.9991961414790996	+	UCGGCCCUUUCGAAGCUCAGAGC	374	119	360	91	46	543	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:376420-377589	Cluster_4139	Pocillopora_meandrina_HIv1___Sc0000015	376420	377589	1170	1063	222	0.7309501411100658	.	UAUUUUCUUCUGGUGGUUGAUGUCCUC	191	6	1019	4	9	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:377611-378031	Cluster_4140	Pocillopora_meandrina_HIv1___Sc0000015	377611	378031	421	140	70	0.4642857142857143	.	UUAACUCCACAACAGAACUCAAAUUCA	17	3	105	0	3	25	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:424996-425424	Cluster_4141	Pocillopora_meandrina_HIv1___Sc0000015	424996	425424	429	89	29	1.0	+	CAAGACCGUGGGUGAGCUUCAAGACAUGA	30	4	83	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:473953-474380	Cluster_4142	Pocillopora_meandrina_HIv1___Sc0000015	473953	474380	428	564	103	0.9184397163120568	+	UGUGACAGCUCUUUUCCUCCUGCAAAGA	138	14	525	4	1	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:503926-504356	Cluster_4143	Pocillopora_meandrina_HIv1___Sc0000015	503926	504356	431	325	67	0.0	-	CGGAUGUCCAUUCAAGAACCUGAAAACUAU	55	5	311	2	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:963175-963592	Cluster_4144	Pocillopora_meandrina_HIv1___Sc0000015	963175	963592	418	1894	20	0.007391763463569166	-	CUUUCUGGAGUUAAGGCG	1855	1886	4	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1021790-1022211	Cluster_4145	Pocillopora_meandrina_HIv1___Sc0000015	1021790	1022211	422	93	14	1.0	+	UCCGUGUGUUUGAUUGGAACAU	28	14	7	9	40	23	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1067869-1068297	Cluster_4146	Pocillopora_meandrina_HIv1___Sc0000015	1067869	1068297	429	153	43	1.0	+	GAAGAGACCAAUCCCAAGUGGCGUAGAUA	96	7	132	1	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1164772-1165200	Cluster_4147	Pocillopora_meandrina_HIv1___Sc0000015	1164772	1165200	429	225	28	1.0	+	UAGCAAAACAAACAGGUCUUUCGAUGGGA	146	0	223	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1253254-1253683	Cluster_4148	Pocillopora_meandrina_HIv1___Sc0000015	1253254	1253683	430	666	111	1.0	+	UCGGUACUCUGUUCAAUAAUAUUUCUC	228	3	657	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1520535-1520962	Cluster_4149	Pocillopora_meandrina_HIv1___Sc0000015	1520535	1520962	428	182	30	0.14285714285714285	-	UUGCAAAGAUAAAUCCGUGGUGAACUUC	74	1	176	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1564041-1564464	Cluster_4150	Pocillopora_meandrina_HIv1___Sc0000015	1564041	1564464	424	138	33	0.9420289855072463	+	UCGGAUUUUAAGGAGACAGCCCGUCAGU	35	5	64	2	2	23	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1699627-1700330	Cluster_4151	Pocillopora_meandrina_HIv1___Sc0000015	1699627	1700330	704	283	149	0.9187279151943463	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	26	1	268	2	5	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1701560-1701989	Cluster_4152	Pocillopora_meandrina_HIv1___Sc0000015	1701560	1701989	430	214	118	0.8598130841121495	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	27	2	197	1	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1754938-1755365	Cluster_4153	Pocillopora_meandrina_HIv1___Sc0000015	1754938	1755365	428	188	67	0.9946808510638298	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	26	5	179	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1761143-1761570	Cluster_4154	Pocillopora_meandrina_HIv1___Sc0000015	1761143	1761570	428	171	62	0.017543859649122806	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	56	0	166	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1783786-1784599	Cluster_4155	Pocillopora_meandrina_HIv1___Sc0000015	1783786	1784599	814	441	242	0.08616780045351474	-	UGAUUUAUGAGGACAAAUUUGAAGCCAG	15	6	410	1	2	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1884414-1884922	Cluster_4156	Pocillopora_meandrina_HIv1___Sc0000015	1884414	1884922	509	397	139	1.0	+	UGUGUCUUGUAUGCUCUUAAGGAGUCGUC	33	4	389	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1908015-1908452	Cluster_4157	Pocillopora_meandrina_HIv1___Sc0000015	1908015	1908452	438	459	174	0.8779956427015251	+	UGUAAGACGCACUCUACUCUGUUGU	73	26	390	9	6	5	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1913033-1913488	Cluster_4158	Pocillopora_meandrina_HIv1___Sc0000015	1913033	1913488	456	273	85	0.32234432234432236	.	AAAGUUAUGAAUAAAAGGAUCUCUGAAGUG	29	0	266	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1920978-1922650	Cluster_4159	Pocillopora_meandrina_HIv1___Sc0000015	1920978	1922650	1673	3703	1056	0.9705644072373751	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	443	17	3526	12	41	47	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1930537-1930964	Cluster_4160	Pocillopora_meandrina_HIv1___Sc0000015	1930537	1930964	428	124	8	1.0	+	UACCAAGGUCUUGUAGUCUAGUACAACU	83	0	123	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1948482-1949013	Cluster_4161	Pocillopora_meandrina_HIv1___Sc0000015	1948482	1949013	532	6631	404	0.023827477001960487	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	2043	160	6248	12	41	16	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2137008-2137427	Cluster_4162	Pocillopora_meandrina_HIv1___Sc0000015	2137008	2137427	420	90	40	0.06666666666666667	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	22	0	86	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2179033-2179463	Cluster_4163	Pocillopora_meandrina_HIv1___Sc0000015	2179033	2179463	431	520	60	0.9980769230769231	+	UGACAAUCAUGCUGCUAAGUUCCUACGC	167	0	517	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2217630-2218097	Cluster_4164	Pocillopora_meandrina_HIv1___Sc0000015	2217630	2218097	468	331	227	0.0030211480362537764	-	CAGUGACUAUCUUGAAUCAGCA	8	72	156	25	31	18	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2219352-2219768	Cluster_4165	Pocillopora_meandrina_HIv1___Sc0000015	2219352	2219768	417	170	126	0.0058823529411764705	-	CGAACUAUAGAUCAGCUGAAGAAAACUGUU	6	32	95	10	15	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2366479-2366907	Cluster_4166	Pocillopora_meandrina_HIv1___Sc0000015	2366479	2366907	429	423	234	0.0	-	GAAGGAAUAAAAACGAUCGACA	29	108	156	48	52	31	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2498054-2498639	Cluster_4167	Pocillopora_meandrina_HIv1___Sc0000015	2498054	2498639	586	525	353	0.0	-	GAUGAUAGAGACUGGGACUACC	8	139	202	52	48	44	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2588188-2588955	Cluster_4168	Pocillopora_meandrina_HIv1___Sc0000015	2588188	2588955	768	404	161	0.04950495049504951	-	UAUUAUACUGCGGGUUACUCAGCCAAGC	25	1	369	3	4	15	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2589510-2591482	Cluster_4169	Pocillopora_meandrina_HIv1___Sc0000015	2589510	2591482	1973	6948	1660	0.051237766263673	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	489	28	6690	14	27	71	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2691120-2691594	Cluster_4170	Pocillopora_meandrina_HIv1___Sc0000015	2691120	2691594	475	2013	239	1.0	+	GGCCUGUUGGUCUAGUGGCAUGAUUCU	872	71	1843	18	22	19	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2693842-2694272	Cluster_4171	Pocillopora_meandrina_HIv1___Sc0000015	2693842	2694272	431	1161	187	0.0	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	446	64	1041	11	15	15	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2695144-2695606	Cluster_4172	Pocillopora_meandrina_HIv1___Sc0000015	2695144	2695606	463	2537	257	0.9992116673236106	+	GGCCUGUUGGUCUAGUGGUAUGAUUCU	1184	123	2309	21	35	33	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2831547-2831974	Cluster_4173	Pocillopora_meandrina_HIv1___Sc0000015	2831547	2831974	428	89	32	0.02247191011235955	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	35	0	88	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2908426-2908851	Cluster_4174	Pocillopora_meandrina_HIv1___Sc0000015	2908426	2908851	426	97	36	1.0	+	UGUUUGAUCUUUAGGUCCUUCGGACAUAGU	16	0	95	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2943925-2944456	Cluster_4175	Pocillopora_meandrina_HIv1___Sc0000015	2943925	2944456	532	11003	465	1.0	+	CGGAUAAGUACACUUGGCACAUUC	4172	356	4797	140	120	176	5414	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2945554-2946088	Cluster_4176	Pocillopora_meandrina_HIv1___Sc0000015	2945554	2946088	535	4587	521	0.9995639851754959	+	GUGCUACAUUAGAACCCAGUCUACUGA	433	318	2622	228	228	503	688	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3136577-3136996	Cluster_4177	Pocillopora_meandrina_HIv1___Sc0000015	3136577	3136996	420	129	62	1.0	+	UGACAAUUCUGAUGGUUUUCACAAUUCUGA	35	3	122	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3137179-3137740	Cluster_4178	Pocillopora_meandrina_HIv1___Sc0000015	3137179	3137740	562	338	142	0.9911242603550295	+	UCCACACCCAGAUAUGUAAUUCCAUGUAGG	18	4	321	0	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3138374-3138802	Cluster_4179	Pocillopora_meandrina_HIv1___Sc0000015	3138374	3138802	429	123	54	1.0	+	UGAAGAUCUGUAGCAAGGCAAAACUUAGC	26	2	115	3	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3139216-3139827	Cluster_4180	Pocillopora_meandrina_HIv1___Sc0000015	3139216	3139827	612	1249	329	1.0	+	UGUUGUCUUCGCAGGUUGCAGUUGUCC	145	10	1202	4	12	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3142394-3142954	Cluster_4181	Pocillopora_meandrina_HIv1___Sc0000015	3142394	3142954	561	1030	207	0.9660194174757282	+	UGAAACGUCAAGUGCUGCAGAAAUUCUGC	190	37	964	15	8	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3143025-3143693	Cluster_4182	Pocillopora_meandrina_HIv1___Sc0000015	3143025	3143693	669	11131	925	0.9614589884107447	+	UAGGAAGAUACAAGACUACAAAUUUUAGU	1520	74	10549	18	52	231	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3143740-3145500	Cluster_4183	Pocillopora_meandrina_HIv1___Sc0000015	3143740	3145500	1761	2155	746	0.9911832946635731	+	UGUAAACUUCUAUGGGUUUCUUUGACGU	82	22	2075	7	8	17	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3147305-3147741	Cluster_4184	Pocillopora_meandrina_HIv1___Sc0000015	3147305	3147741	437	478	154	0.997907949790795	+	UUUCCGGUCUUUUUGCAGCUUUUCUGUGA	52	1	470	0	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3149186-3149832	Cluster_4185	Pocillopora_meandrina_HIv1___Sc0000015	3149186	3149832	647	569	238	0.7504393673110721	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	40	4	526	1	5	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3149890-3150317	Cluster_4186	Pocillopora_meandrina_HIv1___Sc0000015	3149890	3150317	428	381	55	0.0026246719160104987	-	ACUGAGAUUCUGGCUGGAUUGUUCCACU	145	0	377	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3150652-3152268	Cluster_4187	Pocillopora_meandrina_HIv1___Sc0000015	3150652	3152268	1617	4368	867	0.8397435897435898	+	UAACACAACUCGCUUCCGGUCACGACACU	391	29	4137	23	27	61	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3152356-3152775	Cluster_4188	Pocillopora_meandrina_HIv1___Sc0000015	3152356	3152775	420	136	66	0.9485294117647058	+	UUACAGAAAUUAAUGCGGGAAACAGUACG	20	5	130	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3152830-3153763	Cluster_4189	Pocillopora_meandrina_HIv1___Sc0000015	3152830	3153763	934	818	397	0.9877750611246944	+	UGUAAACUUCUACGGGUUUCUUUGACGU	58	14	755	15	3	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3155089-3155641	Cluster_4190	Pocillopora_meandrina_HIv1___Sc0000015	3155089	3155641	553	215	75	0.9069767441860465	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	33	1	194	1	4	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3156880-3158100	Cluster_4191	Pocillopora_meandrina_HIv1___Sc0000015	3156880	3158100	1221	2030	480	0.8044334975369458	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	490	11	1916	6	11	26	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3159946-3161235	Cluster_4192	Pocillopora_meandrina_HIv1___Sc0000015	3159946	3161235	1290	4225	1054	0.7637869822485207	.	UCAGCGAAGAAUUAAAGAAGAACGG	163	92	3696	17	23	71	326	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3162249-3164104	Cluster_4193	Pocillopora_meandrina_HIv1___Sc0000015	3162249	3164104	1856	5369	1326	0.9364872415719874	+	UGAGAACGACGUCACCAGGCUUUAAGG	193	42	4987	16	40	93	191	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3164893-3165320	Cluster_4194	Pocillopora_meandrina_HIv1___Sc0000015	3164893	3165320	428	340	183	0.8382352941176471	+	UGAAUCGGUACGUGCGAACACGAAAAGG	14	1	298	5	4	4	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3165435-3167680	Cluster_4195	Pocillopora_meandrina_HIv1___Sc0000015	3165435	3167680	2246	5160	1661	0.9027131782945736	+	UGUAUCCUGAAGCAUAAGACGCAGUCG	151	93	4662	30	55	74	246	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3167847-3168312	Cluster_4196	Pocillopora_meandrina_HIv1___Sc0000015	3167847	3168312	466	394	156	0.9974619289340102	+	UGUGCUGUUGUCGGAAGCUUGCUGGCAGU	49	2	384	0	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3170293-3170722	Cluster_4197	Pocillopora_meandrina_HIv1___Sc0000015	3170293	3170722	430	190	83	1.0	+	UGAGAUUACGAAUUUUACGAGCGAGAACGU	40	2	181	2	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3171419-3171845	Cluster_4198	Pocillopora_meandrina_HIv1___Sc0000015	3171419	3171845	427	166	70	0.9939759036144579	+	UGCAACGAUUUUCAGUGGACACAAAUGGGA	48	1	160	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3175207-3176561	Cluster_4199	Pocillopora_meandrina_HIv1___Sc0000015	3175207	3176561	1355	8629	1624	0.9392745393440723	+	UGAGACUUGUUGUUGGGUAACUGACGUG	1627	44	8285	27	27	113	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3497367-3497787	Cluster_4200	Pocillopora_meandrina_HIv1___Sc0000015	3497367	3497787	421	74	17	0.0	-	UACUGCUAUUCUUCUUCAGGC	30	4	1	33	17	13	6	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3626943-3627363	Cluster_4201	Pocillopora_meandrina_HIv1___Sc0000015	3626943	3627363	421	89	16	0.0	-	UACUGCUAUUCUUCUUCAGGC	34	5	1	38	21	22	2	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3719411-3719837	Cluster_4202	Pocillopora_meandrina_HIv1___Sc0000015	3719411	3719837	427	173	43	0.2543352601156069	.	UGAUUGGUGCAUUUCGAUCCUUGCUGU	81	1	165	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3776683-3777111	Cluster_4203	Pocillopora_meandrina_HIv1___Sc0000015	3776683	3777111	429	148	42	0.013513513513513514	-	UGAAACGUGUUGCUGAACGCUUGUUGUAG	27	0	147	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3777213-3777641	Cluster_4204	Pocillopora_meandrina_HIv1___Sc0000015	3777213	3777641	429	96	16	0.020833333333333332	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	44	1	95	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3822576-3823004	Cluster_4205	Pocillopora_meandrina_HIv1___Sc0000015	3822576	3823004	429	105	17	0.9714285714285714	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	42	0	103	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3855316-3855759	Cluster_4206	Pocillopora_meandrina_HIv1___Sc0000015	3855316	3855759	444	225	143	0.48	.	CCGGCAAAUACAAGAAUAAAUACAUCGU	7	8	195	3	1	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4067580-4068007	Cluster_4207	Pocillopora_meandrina_HIv1___Sc0000015	4067580	4068007	428	268	113	0.9104477611940298	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	37	4	250	2	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4161872-4162300	Cluster_4208	Pocillopora_meandrina_HIv1___Sc0000015	4161872	4162300	429	695	14	0.0	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	611	0	695	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4602747-4603152	Cluster_4209	Pocillopora_meandrina_HIv1___Sc0000015	4602747	4603152	406	195	150	0.0	-	UGCUGGAACCUGUACGCAAGGAGACA	5	67	64	9	20	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4604728-4605129	Cluster_4210	Pocillopora_meandrina_HIv1___Sc0000015	4604728	4605129	402	269	197	0.0	-	GCUGGAACCUGUACGCAAGGAAGUA	7	77	78	31	34	26	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4606846-4607255	Cluster_4211	Pocillopora_meandrina_HIv1___Sc0000015	4606846	4607255	410	118	86	0.0	-	AGGAAAGACGAUGUUGCUGCC	5	38	29	15	7	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4719398-4719960	Cluster_4212	Pocillopora_meandrina_HIv1___Sc0000015	4719398	4719960	563	991	257	0.9616548940464178	+	UGGAGUAAUUGGAUCUUGUUCAUCAGAGU	97	3	945	4	4	8	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4858467-4858887	Cluster_4213	Pocillopora_meandrina_HIv1___Sc0000015	4858467	4858887	421	138	25	1.0	+	AGAGAGCUUUCUGAACCAGAA	39	37	0	42	58	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4859061-4859670	Cluster_4214	Pocillopora_meandrina_HIv1___Sc0000015	4859061	4859670	610	606	57	1.0	+	UGUGGUUCGGAAUGCUUUCUCC	356	22	2	61	492	20	9	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5252570-5252997	Cluster_4215	Pocillopora_meandrina_HIv1___Sc0000015	5252570	5252997	428	309	124	0.11003236245954692	-	UGUGUCAGAUGCGUUUCAGAAAUGGUU	86	2	296	1	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5253150-5253805	Cluster_4216	Pocillopora_meandrina_HIv1___Sc0000015	5253150	5253805	656	595	286	0.4184873949579832	.	AUAAGAGAUAUAAACUUCUGAAAGCCUGUG	23	3	528	3	6	22	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5254025-5254682	Cluster_4217	Pocillopora_meandrina_HIv1___Sc0000015	5254025	5254682	658	1130	306	0.08672566371681416	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	116	4	1077	1	4	26	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5254920-5255346	Cluster_4218	Pocillopora_meandrina_HIv1___Sc0000015	5254920	5255346	427	236	135	0.13135593220338984	-	UGAGUCGAGGUUAUUCACAAUACGAGC	44	8	208	1	1	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5319061-5319480	Cluster_4219	Pocillopora_meandrina_HIv1___Sc0000015	5319061	5319480	420	13098	30	0.0	-	CUUUCUGGAGUUAAGGCA	10525	13098	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5640163-5640591	Cluster_4220	Pocillopora_meandrina_HIv1___Sc0000015	5640163	5640591	429	136	49	1.0	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	18	0	135	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5920350-5920918	Cluster_4221	Pocillopora_meandrina_HIv1___Sc0000015	5920350	5920918	569	1702	364	0.1045828437132785	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	287	8	1641	7	7	26	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6137366-6138033	Cluster_4222	Pocillopora_meandrina_HIv1___Sc0000015	6137366	6138033	668	743	114	0.3122476446837147	.	UCGACGUCGAUAUCAACAUUCUUAAUGU	236	0	533	1	43	1	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6142344-6142771	Cluster_4223	Pocillopora_meandrina_HIv1___Sc0000015	6142344	6142771	428	281	121	0.5836298932384342	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	54	21	237	4	7	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6290041-6290469	Cluster_4224	Pocillopora_meandrina_HIv1___Sc0000015	6290041	6290469	429	538	74	0.9907063197026023	+	UUGUGUAUUAAGUGAGUUGUGAUUUCGUU	149	3	373	6	7	38	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6307672-6308092	Cluster_4225	Pocillopora_meandrina_HIv1___Sc0000015	6307672	6308092	421	88	40	1.0	+	AACUGUGAGAUUGUGUGAGAGGUGAGC	16	7	68	4	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6426310-6426739	Cluster_4226	Pocillopora_meandrina_HIv1___Sc0000015	6426310	6426739	430	1198	97	0.0	-	UUACGUAUGCUCUUCACACUCAAGCCUAA	349	15	1140	7	18	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6538539-6538961	Cluster_4227	Pocillopora_meandrina_HIv1___Sc0000015	6538539	6538961	423	276	108	0.11594202898550725	-	UGCGUCUGUUCAGUGAUGGAU	65	104	26	114	25	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6803488-6803949	Cluster_4228	Pocillopora_meandrina_HIv1___Sc0000015	6803488	6803949	462	33981	709	0.00011771283952797152	-	GCACUGAUGGUUCAGUGGUAGAAUUCUC	14646	634	32024	281	417	241	384	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6806070-6806578	Cluster_4229	Pocillopora_meandrina_HIv1___Sc0000015	6806070	6806578	509	440	120	0.925	+	GCACUUGUGGUUCAGUGGUUGAACGCU	51	180	167	42	35	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6810454-6810877	Cluster_4230	Pocillopora_meandrina_HIv1___Sc0000015	6810454	6810877	424	82	23	0.0	-	GGGGGCAUAGCUCAGUGGUAGAGCAUU	17	2	55	1	6	0	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6812947-6813473	Cluster_4231	Pocillopora_meandrina_HIv1___Sc0000015	6812947	6813473	527	591	402	0.0	-	UUAGUUGGAUUCGAGCUCUUGGG	7	158	237	58	43	59	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6817520-6818119	Cluster_4232	Pocillopora_meandrina_HIv1___Sc0000015	6817520	6818119	600	679	419	0.0	-	GACCGAAUGGAAACUCUUUACGUUGACGU	14	168	290	66	50	58	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6819204-6819622	Cluster_4233	Pocillopora_meandrina_HIv1___Sc0000015	6819204	6819622	419	84	58	0.0	-	CAGUAGAUCGAGAUCCAAGCUCUGACC	4	19	34	17	5	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6821250-6821667	Cluster_4234	Pocillopora_meandrina_HIv1___Sc0000015	6821250	6821667	418	329	237	0.0	-	GGACGAUGCGCUGUCGAUGC	5	70	142	23	41	25	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7024427-7024845	Cluster_4235	Pocillopora_meandrina_HIv1___Sc0000015	7024427	7024845	419	175	121	0.005714285714285714	-	GUAAACUGUAAAAUGGUAG	5	45	84	8	12	14	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7029745-7030423	Cluster_4236	Pocillopora_meandrina_HIv1___Sc0000015	7029745	7030423	679	14149	2852	0.9830376705067496	+	CCCUCGUGGCUGAUCUGGUGAU	694	3266	5047	1356	2266	1148	1066	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7075190-7075786	Cluster_4237	Pocillopora_meandrina_HIv1___Sc0000015	7075190	7075786	597	5662	472	0.0031790886612504416	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	901	10	5608	6	3	10	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7203794-7204218	Cluster_4238	Pocillopora_meandrina_HIv1___Sc0000015	7203794	7204218	425	88	26	0.9090909090909091	+	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	44	1	83	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7220785-7221212	Cluster_4239	Pocillopora_meandrina_HIv1___Sc0000015	7220785	7221212	428	238	122	0.5882352941176471	.	UGGCCGAUCUGGACACUCGUU	14	77	41	69	24	23	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7385938-7386363	Cluster_4240	Pocillopora_meandrina_HIv1___Sc0000015	7385938	7386363	426	292	136	0.3458904109589041	.	UGCGAAAUGAACUCAGAGCUUUCUG	61	2	259	4	5	1	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7387855-7388282	Cluster_4241	Pocillopora_meandrina_HIv1___Sc0000015	7387855	7388282	428	99	8	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	67	0	98	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7563932-7564528	Cluster_4242	Pocillopora_meandrina_HIv1___Sc0000015	7563932	7564528	597	5601	505	0.9973219068023568	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	832	10	5542	3	1	14	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7642015-7642588	Cluster_4243	Pocillopora_meandrina_HIv1___Sc0000015	7642015	7642588	574	613	220	0.037520391517128875	-	UAUCUGGAAAACUAUAUGAUCUUAACUUUA	66	11	582	1	3	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7782375-7782875	Cluster_4244	Pocillopora_meandrina_HIv1___Sc0000015	7782375	7782875	501	610	188	0.8147540983606557	+	UGUAAACCUCUGAUUACC	68	108	452	1	0	16	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7789352-7789778	Cluster_4245	Pocillopora_meandrina_HIv1___Sc0000015	7789352	7789778	427	200	104	0.88	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	22	1	184	1	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8022317-8022745	Cluster_4246	Pocillopora_meandrina_HIv1___Sc0000015	8022317	8022745	429	202	94	0.8861386138613861	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	23	1	188	0	0	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8037863-8038266	Cluster_4247	Pocillopora_meandrina_HIv1___Sc0000015	8037863	8038266	404	248	122	0.9193548387096774	+	UACAAGCACACCGUUUGUCAACUUUGAC	15	14	225	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8038314-8038740	Cluster_4248	Pocillopora_meandrina_HIv1___Sc0000015	8038314	8038740	427	209	99	0.8755980861244019	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	30	0	200	1	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8138598-8139026	Cluster_4249	Pocillopora_meandrina_HIv1___Sc0000015	8138598	8139026	429	183	72	1.0	+	GAAGAGUUGAGUAGGAUGUUGAACGAAGA	31	8	166	5	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8253460-8253904	Cluster_4250	Pocillopora_meandrina_HIv1___Sc0000015	8253460	8253904	445	432	136	0.9814814814814815	+	UACGGUAUUUGAGACGCAAUAUGACUCGC	37	7	414	2	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8262262-8262689	Cluster_4251	Pocillopora_meandrina_HIv1___Sc0000015	8262262	8262689	428	204	79	0.9950980392156863	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	5	192	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8263467-8263915	Cluster_4252	Pocillopora_meandrina_HIv1___Sc0000015	8263467	8263915	449	361	159	0.7894736842105263	.	UCUUGUCUUAAAUUCUGAAUUCUCACUUC	60	2	338	1	3	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8339361-8339959	Cluster_4253	Pocillopora_meandrina_HIv1___Sc0000015	8339361	8339959	599	5102	973	0.999607996863975	+	UGCCCAGUGACGAUAAAGAUGA	298	1308	1425	437	714	483	735	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8387393-8387805	Cluster_4254	Pocillopora_meandrina_HIv1___Sc0000015	8387393	8387805	413	187	134	0.0	-	UUAGAUCGAUGACGUGCCC	6	48	82	19	16	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8497462-8497984	Cluster_4255	Pocillopora_meandrina_HIv1___Sc0000015	8497462	8497984	523	1270	375	0.0	-	GGCCAAAGUGAUAACGCUUAUACUCUGAUG	151	175	785	91	75	75	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8498175-8498704	Cluster_4256	Pocillopora_meandrina_HIv1___Sc0000015	8498175	8498704	530	899	302	0.0	-	GAUAAAAAAUAAAGUCUGACACUG	229	213	230	71	80	51	254	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8500922-8501444	Cluster_4257	Pocillopora_meandrina_HIv1___Sc0000015	8500922	8501444	523	915	279	0.0	-	GAUAAAAUUGCAAGUCUGAUACUGA	92	126	482	80	41	63	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8543212-8543629	Cluster_4258	Pocillopora_meandrina_HIv1___Sc0000015	8543212	8543629	418	78	13	1.0	+	UGGCCUGAAAAAAAAAAAAA	17	57	0	13	8	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8687559-8687991	Cluster_4259	Pocillopora_meandrina_HIv1___Sc0000015	8687559	8687991	433	520924	837	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	202351	16	520054	6	25	54	769	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8753275-8753749	Cluster_4260	Pocillopora_meandrina_HIv1___Sc0000015	8753275	8753749	475	5128	372	0.0001950078003120125	-	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	1452	146	3933	452	424	123	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8753830-8754251	Cluster_4261	Pocillopora_meandrina_HIv1___Sc0000015	8753830	8754251	422	99	51	0.010101010101010102	-	UCCCAUGUGGUCUAGUGGUUAGGAUUCCU	9	20	65	10	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8756244-8756664	Cluster_4262	Pocillopora_meandrina_HIv1___Sc0000015	8756244	8756664	421	336	17	1.0	+	UCGACUCCCGGUAUGGGAACA	286	1	2	299	18	15	1	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8783889-8784306	Cluster_4263	Pocillopora_meandrina_HIv1___Sc0000015	8783889	8784306	418	118	9	0.0	-	CGGCCUGAAAAAAAAAAA	76	118	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8855524-8855938	Cluster_4264	Pocillopora_meandrina_HIv1___Sc0000015	8855524	8855938	415	110	86	0.0	-	GGAUUCUACUGUAGCUCCGUAAGUGCU	3	29	49	6	14	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9017659-9018085	Cluster_4265	Pocillopora_meandrina_HIv1___Sc0000015	9017659	9018085	427	449	65	1.0	+	GGGGGCAUAGCUCAGUGGUAGAGCAUU	221	5	366	19	20	10	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9071577-9072007	Cluster_4266	Pocillopora_meandrina_HIv1___Sc0000015	9071577	9072007	431	97301	292	0.9999897226133339	+	GCACUGGUGGUUCAGUGGUAGAAUUCU	61067	9	96493	12	27	38	722	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9072831-9073262	Cluster_4267	Pocillopora_meandrina_HIv1___Sc0000015	9072831	9073262	432	583538	873	0.9999982863155441	+	GCACUGGUGGUUCAGUGGUAGAAUUCUCGCC	166469	47	582263	15	66	81	1066	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9225605-9226032	Cluster_4268	Pocillopora_meandrina_HIv1___Sc0000015	9225605	9226032	428	337	249	0.002967359050445104	-	AGAAAGUAGAAAAGGAAAUUCGUCGUUGGCU	8	78	164	21	35	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9227729-9228139	Cluster_4269	Pocillopora_meandrina_HIv1___Sc0000015	9227729	9228139	411	150	104	0.013333333333333334	-	GAAGGGUCUUGUGCUGAGCA	8	51	44	23	11	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:129098-129526	Cluster_4270	Pocillopora_meandrina_HIv1___Sc0000016	129098	129526	429	134	22	1.0	+	UGAGACCUGUCUGCAUUGAGCUUUAGUGU	85	2	131	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:147295-147704	Cluster_4271	Pocillopora_meandrina_HIv1___Sc0000016	147295	147704	410	172	88	0.19767441860465115	-	UGAAAACUUAACAACGGACGGU	13	1	113	7	23	23	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:166043-166473	Cluster_4272	Pocillopora_meandrina_HIv1___Sc0000016	166043	166473	431	134	44	0.9925373134328358	+	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	58	0	133	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:302160-302585	Cluster_4273	Pocillopora_meandrina_HIv1___Sc0000016	302160	302585	426	100	41	0.98	+	UGUGUAGAUAUGUCUUUUGGACAGGA	32	0	99	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:303144-303889	Cluster_4274	Pocillopora_meandrina_HIv1___Sc0000016	303144	303889	746	1355	419	0.8892988929889298	+	UGACGAUUGGUGUGAGUAGCUCAGCAC	95	8	1172	8	8	17	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:331685-332113	Cluster_4275	Pocillopora_meandrina_HIv1___Sc0000016	331685	332113	429	300	58	1.0	+	UGGAAUUCGAAGCAAGUAACAAUCGACA	94	3	295	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:336418-337826	Cluster_4276	Pocillopora_meandrina_HIv1___Sc0000016	336418	337826	1409	872	402	0.9678899082568807	+	UAGGUAAUGGCACAAACUGAGAGGCGU	25	6	839	0	3	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:337943-338533	Cluster_4277	Pocillopora_meandrina_HIv1___Sc0000016	337943	338533	591	502	276	0.9322709163346613	+	UCUUUCGGUUACUUCCAUCUGGUGAUAAGC	19	4	474	0	3	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:338895-340012	Cluster_4278	Pocillopora_meandrina_HIv1___Sc0000016	338895	340012	1118	1791	640	0.9296482412060302	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	102	17	1669	4	7	27	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:357787-358206	Cluster_4279	Pocillopora_meandrina_HIv1___Sc0000016	357787	358206	420	167	120	0.19161676646706588	-	UGGUGGAGCGCUGCACCGGU	6	49	46	21	26	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:364050-364469	Cluster_4280	Pocillopora_meandrina_HIv1___Sc0000016	364050	364469	420	75	26	0.0	-	ACCCACUGCCAAGGAGCACUUUGAUGAAA	24	1	71	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:380560-380977	Cluster_4281	Pocillopora_meandrina_HIv1___Sc0000016	380560	380977	418	111	52	0.918918918918919	+	UGAUACUUCAAGCACUCCUUUCCCAUU	22	1	101	1	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:399937-400364	Cluster_4282	Pocillopora_meandrina_HIv1___Sc0000016	399937	400364	428	190	91	0.18947368421052632	-	UCACGGUAGUAGUGUUGUUCAAUAGACUG	33	1	165	0	3	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:408747-409166	Cluster_4283	Pocillopora_meandrina_HIv1___Sc0000016	408747	409166	420	392	223	0.47959183673469385	.	UGGAAUAAAGCAACUACGUG	29	271	12	83	23	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:411660-412087	Cluster_4284	Pocillopora_meandrina_HIv1___Sc0000016	411660	412087	428	148	51	0.9459459459459459	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	47	1	145	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:423086-423758	Cluster_4285	Pocillopora_meandrina_HIv1___Sc0000016	423086	423758	673	326	139	0.3803680981595092	.	UGUGAUUUCAACUGUGAGUGUCAGAA	20	8	219	5	6	30	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:429147-429883	Cluster_4286	Pocillopora_meandrina_HIv1___Sc0000016	429147	429883	737	304	153	0.006578947368421052	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	39	3	297	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:430237-430690	Cluster_4287	Pocillopora_meandrina_HIv1___Sc0000016	430237	430690	454	354	155	0.00847457627118644	-	UGACGGCCUUUCAUCUUUGACGCAAUGAUC	20	2	344	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:430801-431229	Cluster_4288	Pocillopora_meandrina_HIv1___Sc0000016	430801	431229	429	119	36	0.0	-	CUCUAGCACACUCGCACAAGUUAAAGGCA	27	2	116	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:449292-449715	Cluster_4289	Pocillopora_meandrina_HIv1___Sc0000016	449292	449715	424	183	86	0.01639344262295082	-	UGUAUCUCCAGCGUCUGAACAAGUCAUGU	31	14	145	9	9	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:461171-461580	Cluster_4290	Pocillopora_meandrina_HIv1___Sc0000016	461171	461580	410	127	54	0.9133858267716536	+	UGAUCAAACUUCUCACAUGCAAAGACUAU	29	0	122	0	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:515713-516345	Cluster_4291	Pocillopora_meandrina_HIv1___Sc0000016	515713	516345	633	367	275	0.9700272479564033	+	GUUGAUCGAGCAUUGCCCCGCGUGACU	7	104	134	23	43	31	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:519485-520144	Cluster_4292	Pocillopora_meandrina_HIv1___Sc0000016	519485	520144	660	420	269	0.9928571428571429	+	AGAGGGGGUAAGAGCGCU	16	114	169	35	31	32	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:700335-700759	Cluster_4293	Pocillopora_meandrina_HIv1___Sc0000016	700335	700759	425	82	26	0.21951219512195122	.	UUGGCACGUGUUGUUCCACAAAGAUAGAGU	38	1	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:705542-706139	Cluster_4294	Pocillopora_meandrina_HIv1___Sc0000016	705542	706139	598	197	33	0.005076142131979695	-	UACCAUAGAACUCACUUGAACAUUUCAUC	56	0	191	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:786273-786694	Cluster_4295	Pocillopora_meandrina_HIv1___Sc0000016	786273	786694	422	1013	42	0.9990128331688055	+	UCUGACGAGGGGCUGACACUCA	415	32	0	498	463	13	7	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:792205-792630	Cluster_4296	Pocillopora_meandrina_HIv1___Sc0000016	792205	792630	426	95	36	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	33	0	94	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1497786-1498305	Cluster_4297	Pocillopora_meandrina_HIv1___Sc0000016	1497786	1498305	520	2112	228	0.047821969696969696	-	UGAGACAGUACACACGAUUUGAUAUA	485	7	2063	2	6	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1506420-1506847	Cluster_4298	Pocillopora_meandrina_HIv1___Sc0000016	1506420	1506847	428	178	75	0.9044943820224719	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	70	0	167	1	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1508607-1509287	Cluster_4299	Pocillopora_meandrina_HIv1___Sc0000016	1508607	1509287	681	435	239	0.7586206896551724	.	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	24	2	360	1	4	19	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1509675-1510523	Cluster_4300	Pocillopora_meandrina_HIv1___Sc0000016	1509675	1510523	849	1099	410	0.8334849863512284	+	UGAUGACUUUGGACUGAAACCAUGAACA	139	15	978	7	23	24	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1528767-1529419	Cluster_4301	Pocillopora_meandrina_HIv1___Sc0000016	1528767	1529419	653	668	241	0.0658682634730539	-	UAAUGACUUCAGAGUAGACAGAGACGGU	73	7	638	7	2	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1530112-1530550	Cluster_4302	Pocillopora_meandrina_HIv1___Sc0000016	1530112	1530550	439	297	118	0.39730639730639733	.	AUAUCCUACAUCUUGUUCAGACGCUGACU	37	3	263	2	4	8	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1542070-1542497	Cluster_4303	Pocillopora_meandrina_HIv1___Sc0000016	1542070	1542497	428	97	24	1.0	+	AGGAUGGACUGUGUUCCAGAGGAGACUG	27	0	89	0	8	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1564856-1565893	Cluster_4304	Pocillopora_meandrina_HIv1___Sc0000016	1564856	1565893	1038	1275	601	0.6580392156862745	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	79	37	1116	9	21	27	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1567184-1567608	Cluster_4305	Pocillopora_meandrina_HIv1___Sc0000016	1567184	1567608	425	254	143	0.16141732283464566	-	CUUGGAUUGAUGCAGAAGUUAACA	16	5	221	2	0	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1961743-1963021	Cluster_4306	Pocillopora_meandrina_HIv1___Sc0000016	1961743	1963021	1279	4170	1203	0.4920863309352518	.	UGAACCAGGAACACUUCGAGCUUUGAUU	220	46	3778	50	39	57	200	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1963371-1964202	Cluster_4307	Pocillopora_meandrina_HIv1___Sc0000016	1963371	1964202	832	4349	895	0.7387905265578294	.	UGUGACUGAAAAGAUCUUGAAAGAACUUA	457	52	3864	33	38	78	284	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1964293-1964722	Cluster_4308	Pocillopora_meandrina_HIv1___Sc0000016	1964293	1964722	430	417	83	0.947242206235012	+	AAACAGAAGACAAAGAUUGUUGAGACAGA	215	0	411	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1973703-1974132	Cluster_4309	Pocillopora_meandrina_HIv1___Sc0000016	1973703	1974132	430	136	42	0.0	-	UGAACGUCUGUGAGCGUCUGUACGCUUAUU	61	0	134	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1975076-1975490	Cluster_4310	Pocillopora_meandrina_HIv1___Sc0000016	1975076	1975490	415	148	65	0.006756756756756757	-	UGUUAACUCACCAUCUAAAACGAAUAGAUU	17	0	147	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1979755-1980183	Cluster_4311	Pocillopora_meandrina_HIv1___Sc0000016	1979755	1980183	429	142	30	0.0	-	UGUUUCAAAGGGAUUCAGUAAGAUUAAUA	71	12	127	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1980877-1982515	Cluster_4312	Pocillopora_meandrina_HIv1___Sc0000016	1980877	1982515	1639	3949	1087	0.03165358318561661	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	246	29	3731	9	40	63	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1983933-1984362	Cluster_4313	Pocillopora_meandrina_HIv1___Sc0000016	1983933	1984362	430	222	110	0.0045045045045045045	-	UGCACCGGUCUUUUUCGAGUCACUGACUUUU	27	3	216	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1985561-1987465	Cluster_4314	Pocillopora_meandrina_HIv1___Sc0000016	1985561	1987465	1905	9996	1615	0.08653461384553822	-	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCG	608	77	9271	62	51	104	431	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1987515-1988161	Cluster_4315	Pocillopora_meandrina_HIv1___Sc0000016	1987515	1988161	647	239	117	0.100418410041841	-	UUCUUCAUUGCUUUAGUCACAGACUUU	29	7	218	1	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1988558-1988986	Cluster_4316	Pocillopora_meandrina_HIv1___Sc0000016	1988558	1988986	429	1314	129	0.0319634703196347	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	809	2	1273	0	5	2	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1992010-1992438	Cluster_4317	Pocillopora_meandrina_HIv1___Sc0000016	1992010	1992438	429	114	39	0.008771929824561403	-	UGCCAUCUUGAAGAUCUGUGUGCACCAUC	54	1	103	1	6	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1992665-1994013	Cluster_4318	Pocillopora_meandrina_HIv1___Sc0000016	1992665	1994013	1349	12080	1493	0.019619205298013247	-	UGUAACAUUUUGCAUCGAUCGACGGUACA	1379	71	11690	112	30	53	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1994460-1994876	Cluster_4319	Pocillopora_meandrina_HIv1___Sc0000016	1994460	1994876	417	226	112	0.01327433628318584	-	UAGCACAUCAAGGCAGUCAAAGAACUAGUC	29	0	213	2	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1995076-1995817	Cluster_4320	Pocillopora_meandrina_HIv1___Sc0000016	1995076	1995817	742	1202	313	0.0016638935108153079	-	ACGGCAACUUCUCAUCUGUAACCUGCAC	196	8	1146	7	2	6	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1997036-1997863	Cluster_4321	Pocillopora_meandrina_HIv1___Sc0000016	1997036	1997863	828	672	347	0.026785714285714284	-	UCGGUGACGAAGGUAAAUAACUAAUGACGU	60	20	611	5	2	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1998333-1999692	Cluster_4322	Pocillopora_meandrina_HIv1___Sc0000016	1998333	1999692	1360	18410	1487	0.04513851167843563	-	UCUGCCGGGAGCUUCUUGUAGAAGACGG	1172	91	17200	55	59	290	715	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1999724-2000612	Cluster_4323	Pocillopora_meandrina_HIv1___Sc0000016	1999724	2000612	889	572	252	0.0	-	UGAUUAUCCGUCUUGGUUAGAAGUUUGCC	34	12	539	3	4	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2000859-2002047	Cluster_4324	Pocillopora_meandrina_HIv1___Sc0000016	2000859	2002047	1189	1067	416	0.0	-	UUUCCAACAUCUGCAGGCGAGACUGC	53	14	1026	4	6	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2004356-2005245	Cluster_4325	Pocillopora_meandrina_HIv1___Sc0000016	2004356	2005245	890	1461	450	0.0006844626967830253	-	UGAGAACUGCUGAUUGGGCUACAAGAUCGC	151	6	1169	5	12	222	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2005475-2006329	Cluster_4326	Pocillopora_meandrina_HIv1___Sc0000016	2005475	2006329	855	3092	310	0.43046571798188876	.	GAUUGGAACAGUCAUCAGACGGGUGGACA	422	87	2896	4	12	38	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2007743-2008172	Cluster_4327	Pocillopora_meandrina_HIv1___Sc0000016	2007743	2008172	430	198	62	0.010101010101010102	-	UGCUGAACAUUGCUCUUCUAAGAAGAUGAC	46	1	178	2	1	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2009466-2010667	Cluster_4328	Pocillopora_meandrina_HIv1___Sc0000016	2009466	2010667	1202	1815	463	0.32231404958677684	.	UUUCCGUUGCAUUAGAGGACUUCUUGUC	193	30	1491	30	27	31	206	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2011247-2011657	Cluster_4329	Pocillopora_meandrina_HIv1___Sc0000016	2011247	2011657	411	147	67	0.5850340136054422	.	UUAACUCCACAACAGAACUCAAAUUCACAGA	11	3	115	2	4	16	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2011707-2012152	Cluster_4330	Pocillopora_meandrina_HIv1___Sc0000016	2011707	2012152	446	2043	163	0.17670093000489476	-	UGCGAUAAUAAAAUUCCAGGACUUUCCAGG	509	1	1821	6	9	65	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2012397-2013189	Cluster_4331	Pocillopora_meandrina_HIv1___Sc0000016	2012397	2013189	793	1066	438	0.0825515947467167	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	43	8	995	2	4	13	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2013194-2013719	Cluster_4332	Pocillopora_meandrina_HIv1___Sc0000016	2013194	2013719	526	431	211	0.05568445475638051	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	35	5	405	3	3	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2014002-2014751	Cluster_4333	Pocillopora_meandrina_HIv1___Sc0000016	2014002	2014751	750	770	253	0.03766233766233766	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	62	3	748	4	2	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2015470-2015897	Cluster_4334	Pocillopora_meandrina_HIv1___Sc0000016	2015470	2015897	428	116	10	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	80	0	115	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2018256-2019743	Cluster_4335	Pocillopora_meandrina_HIv1___Sc0000016	2018256	2019743	1488	3971	1292	0.09695290858725762	-	UAGCGGUAUUUUCUUCAAUAGUAAGGU	156	44	3522	23	35	173	174	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2019759-2020804	Cluster_4336	Pocillopora_meandrina_HIv1___Sc0000016	2019759	2020804	1046	2530	734	0.05810276679841897	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	260	25	2389	17	28	27	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2020872-2021279	Cluster_4337	Pocillopora_meandrina_HIv1___Sc0000016	2020872	2021279	408	101	61	0.039603960396039604	-	UGAGUAAAGAUUGUUAGAAACUGUUUC	7	1	87	0	8	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2021407-2022449	Cluster_4338	Pocillopora_meandrina_HIv1___Sc0000016	2021407	2022449	1043	1062	404	0.307909604519774	.	CAACUUCGCAAAGACCUGACAAGA	58	18	847	65	4	31	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2028106-2028519	Cluster_4339	Pocillopora_meandrina_HIv1___Sc0000016	2028106	2028519	414	80	47	1.0	+	AAAGGUAACUACUGUAGGCU	9	29	23	18	7	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2030384-2031292	Cluster_4340	Pocillopora_meandrina_HIv1___Sc0000016	2030384	2031292	909	1528	607	0.07591623036649214	-	UAAUGAAGUCGUAAUUUGUCCAUCC	76	6	1463	6	12	16	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2031516-2032028	Cluster_4341	Pocillopora_meandrina_HIv1___Sc0000016	2031516	2032028	513	196	101	0.025510204081632654	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	26	0	189	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2032248-2032679	Cluster_4342	Pocillopora_meandrina_HIv1___Sc0000016	2032248	2032679	432	298	122	0.08389261744966443	-	UACGUGUAGAAAGCCUUCUCUGACAUCAA	20	3	277	0	1	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2044454-2044862	Cluster_4343	Pocillopora_meandrina_HIv1___Sc0000016	2044454	2044862	409	85	37	0.1411764705882353	-	UAAUCUGACAUAAACUACCUAGGCACGAGG	25	2	74	0	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2046027-2046437	Cluster_4344	Pocillopora_meandrina_HIv1___Sc0000016	2046027	2046437	411	94	49	0.010638297872340425	-	UGAUUUAGAACUUGUGAACUGUACUAUGCU	13	3	89	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2047355-2048281	Cluster_4345	Pocillopora_meandrina_HIv1___Sc0000016	2047355	2048281	927	6886	865	0.7448446122567528	.	UGUGAUUGCAUGGCUGGUCUUGGAGAGAGC	1136	85	5781	73	72	273	602	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2049709-2052600	Cluster_4346	Pocillopora_meandrina_HIv1___Sc0000016	2049709	2052600	2892	31765	5398	0.011427671966000315	-	UGGUCUCACGAACUUCUUUUUUUCAAGA	1445	187	30751	168	98	212	349	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2052862-2053462	Cluster_4347	Pocillopora_meandrina_HIv1___Sc0000016	2052862	2053462	601	1981	475	0.3437657748611812	.	CGUACCUAAAUCUGUGAAUCCUGAACUUCC	139	68	1791	8	14	49	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2054561-2055417	Cluster_4348	Pocillopora_meandrina_HIv1___Sc0000016	2054561	2055417	857	655	196	0.6183206106870229	.	UCACGAUUUUGAAUGGUAUGGGCA	101	18	463	5	7	33	129	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2057548-2059148	Cluster_4349	Pocillopora_meandrina_HIv1___Sc0000016	2057548	2059148	1601	1342	487	0.04694485842026826	-	UCCGAGAAGCUGAUUUCUGGACCAGUA	57	24	1293	5	4	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2059175-2059856	Cluster_4350	Pocillopora_meandrina_HIv1___Sc0000016	2059175	2059856	682	381	174	0.0026246719160104987	-	UGAUCAAGGAGCUCUUUAGCUUUAACCCU	26	2	365	2	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2059892-2060823	Cluster_4351	Pocillopora_meandrina_HIv1___Sc0000016	2059892	2060823	932	738	313	0.0040650406504065045	-	UGCAUUUUUCCGAUAUAGAGCUGGACGU	47	6	720	4	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2061622-2062935	Cluster_4352	Pocillopora_meandrina_HIv1___Sc0000016	2061622	2062935	1314	7388	1515	0.008391987005955604	-	UGUGCAUUCAGGUUUGUCAUUGUCAAUAAC	523	42	7011	25	92	153	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2062993-2064046	Cluster_4353	Pocillopora_meandrina_HIv1___Sc0000016	2062993	2064046	1054	1880	693	0.01276595744680851	-	UGGGAACAUCUUUGAAGUCAUUUUUAUG	64	33	1764	10	28	31	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2064706-2065899	Cluster_4354	Pocillopora_meandrina_HIv1___Sc0000016	2064706	2065899	1194	3236	902	0.2574165636588381	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	594	27	2905	19	137	62	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2067316-2069298	Cluster_4355	Pocillopora_meandrina_HIv1___Sc0000016	2067316	2069298	1983	4876	1510	0.7750205086136177	.	UUACGAAAUAUCUGAUGGCUGAUC	253	55	4105	38	31	148	499	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2069353-2070005	Cluster_4356	Pocillopora_meandrina_HIv1___Sc0000016	2069353	2070005	653	2543	468	0.03106567046795124	-	UGUUUCAAAGAAAGUCACUAAGACUGAGA	255	30	2455	3	19	23	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2070375-2070801	Cluster_4357	Pocillopora_meandrina_HIv1___Sc0000016	2070375	2070801	427	155	76	0.01935483870967742	-	UCACAUGUAGGUACCAGAUCUCUUCAAAG	17	3	144	1	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2071265-2073721	Cluster_4358	Pocillopora_meandrina_HIv1___Sc0000016	2071265	2073721	2457	12171	3000	0.040177471037712596	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	501	128	11045	68	105	197	628	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2074388-2074931	Cluster_4359	Pocillopora_meandrina_HIv1___Sc0000016	2074388	2074931	544	422	191	0.20853080568720378	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	90	13	364	10	14	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2075275-2075720	Cluster_4360	Pocillopora_meandrina_HIv1___Sc0000016	2075275	2075720	446	313	110	0.025559105431309903	-	UCCGACUUAUUAUAAUUCUUGAAAGACUGA	26	1	303	3	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2076668-2077241	Cluster_4361	Pocillopora_meandrina_HIv1___Sc0000016	2076668	2077241	574	2625	303	0.0064761904761904765	-	UGUUUCUUUUUAAGUCUAUGUAAGUCCACU	733	11	2561	13	14	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2078689-2079504	Cluster_4362	Pocillopora_meandrina_HIv1___Sc0000016	2078689	2079504	816	443	253	0.09932279909706546	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	17	3	409	5	1	8	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2081725-2082293	Cluster_4363	Pocillopora_meandrina_HIv1___Sc0000016	2081725	2082293	569	5955	502	0.006381192275398824	-	UGUCAAAUUCUCAUCUUCCUAAGCUUU	1208	44	5799	48	10	15	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2083077-2083505	Cluster_4364	Pocillopora_meandrina_HIv1___Sc0000016	2083077	2083505	429	209	82	0.215311004784689	.	UUUUUGCUGAGUUGGCUACCAUGG	27	1	162	1	5	1	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2083699-2084123	Cluster_4365	Pocillopora_meandrina_HIv1___Sc0000016	2083699	2084123	425	158	63	0.08227848101265822	-	UCCAUAACUAUUUCUUGUUCCAGCU	24	2	147	0	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2086534-2086961	Cluster_4366	Pocillopora_meandrina_HIv1___Sc0000016	2086534	2086961	428	171	54	0.023391812865497075	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	47	0	165	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2087543-2088032	Cluster_4367	Pocillopora_meandrina_HIv1___Sc0000016	2087543	2088032	490	3538	348	0.0	-	UUCCUGCAGAUAUUUGAGCCAGAUAUAUAUG	555	357	2861	18	18	39	245	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2088101-2089388	Cluster_4368	Pocillopora_meandrina_HIv1___Sc0000016	2088101	2089388	1288	2650	453	0.0022641509433962265	-	UAAACCUCUUGGCAAUAUAAGAUAACUCA	503	23	2591	7	6	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2089561-2090649	Cluster_4369	Pocillopora_meandrina_HIv1___Sc0000016	2089561	2090649	1089	796	337	0.0	-	UUUUGCUUCUCCAGCUGUAGUUCUUGG	46	8	774	5	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2090934-2091801	Cluster_4370	Pocillopora_meandrina_HIv1___Sc0000016	2090934	2091801	868	2379	248	0.004203446826397646	-	UAGGGUGCAACACCAUCUGUAUUGAAUGAG	619	0	2364	0	5	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2098714-2100470	Cluster_4371	Pocillopora_meandrina_HIv1___Sc0000016	2098714	2100470	1757	3512	829	0.0011389521640091116	-	UACAAGGCCAUCUAAAAUAGAAUCAAU	426	23	3400	7	13	43	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2100713-2101564	Cluster_4372	Pocillopora_meandrina_HIv1___Sc0000016	2100713	2101564	852	3698	598	0.0005408328826392645	-	UGACAUCAGCUCUGUGACUCUUUUGG	561	25	3410	4	19	83	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2101591-2102134	Cluster_4373	Pocillopora_meandrina_HIv1___Sc0000016	2101591	2102134	544	664	179	0.0	-	UCCUAGAUGUAUGAUGACUGAGCAUUUCAU	36	4	620	1	4	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2107776-2108200	Cluster_4374	Pocillopora_meandrina_HIv1___Sc0000016	2107776	2108200	425	139	54	0.0	-	UAUGGUGUGCUAGUCAGACAAGUCACUGAU	22	3	131	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2108797-2109222	Cluster_4375	Pocillopora_meandrina_HIv1___Sc0000016	2108797	2109222	426	87	40	0.0	-	UGUGAACUUCUUUCUGACCUGUGAAUGC	13	0	86	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2109276-2109705	Cluster_4376	Pocillopora_meandrina_HIv1___Sc0000016	2109276	2109705	430	101	31	0.0	-	UGAUUUAAAGUUACUGUAUGAGCUAGCUGU	44	1	98	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2155127-2155546	Cluster_4377	Pocillopora_meandrina_HIv1___Sc0000016	2155127	2155546	420	127	65	0.9291338582677166	+	UUUGAUCGGUUUUGGCGUGU	18	74	6	39	6	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2330302-2330731	Cluster_4378	Pocillopora_meandrina_HIv1___Sc0000016	2330302	2330731	430	87	21	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	33	0	85	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2345038-2345465	Cluster_4379	Pocillopora_meandrina_HIv1___Sc0000016	2345038	2345465	428	97	17	0.030927835051546393	-	AACUACUGCUCGUGCUCUAGAUAUGACA	62	1	94	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2383238-2383667	Cluster_4380	Pocillopora_meandrina_HIv1___Sc0000016	2383238	2383667	430	280	103	0.6785714285714286	.	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	68	36	228	7	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2403203-2403628	Cluster_4381	Pocillopora_meandrina_HIv1___Sc0000016	2403203	2403628	426	92	32	0.021739130434782608	-	UGUGUAGAUAUGUCUUUUGGACAGGA	23	0	92	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2869347-2869910	Cluster_4382	Pocillopora_meandrina_HIv1___Sc0000016	2869347	2869910	564	512	324	0.98046875	+	UUUUGAACAGGAUCGAGGCU	9	111	269	37	30	23	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2977687-2978110	Cluster_4383	Pocillopora_meandrina_HIv1___Sc0000016	2977687	2978110	424	101	38	0.0	-	ACUGAGAUUCUGGCUGGAUUGUUCC	16	3	86	0	1	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2998303-2998837	Cluster_4384	Pocillopora_meandrina_HIv1___Sc0000016	2998303	2998837	535	779	347	0.0	-	UAGGUCUGAUGCUGAAUAGGUUGUCACAAUU	84	157	459	31	48	46	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3036411-3036839	Cluster_4385	Pocillopora_meandrina_HIv1___Sc0000016	3036411	3036839	429	232	105	0.41379310344827586	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	49	8	208	2	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3090988-3091978	Cluster_4386	Pocillopora_meandrina_HIv1___Sc0000016	3090988	3091978	991	1652	590	0.8819612590799032	+	UUUGCUGAGAUACAUUUUCCUUCUGA	62	12	1450	6	16	67	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3094680-3095109	Cluster_4387	Pocillopora_meandrina_HIv1___Sc0000016	3094680	3095109	430	200	82	0.94	+	UAAUCCCAGGUCUUGUAUUGUAAUACUUCA	74	0	193	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3210812-3211240	Cluster_4388	Pocillopora_meandrina_HIv1___Sc0000016	3210812	3211240	429	1307	141	0.9801071155317521	+	UUCAGAUAUUUCAGCUGCGAGAUUGA	566	2	1289	1	4	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3211317-3212438	Cluster_4389	Pocillopora_meandrina_HIv1___Sc0000016	3211317	3212438	1122	3521	798	0.8631070718545868	+	UGUGGUAGACUUGUUUUUGACAUGGCA	163	107	2966	58	76	158	156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3214743-3215578	Cluster_4390	Pocillopora_meandrina_HIv1___Sc0000016	3214743	3215578	836	346	138	0.02023121387283237	-	UGACAUUGUUCCUUCAACUGUUUUUUGAC	36	2	336	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3215721-3216149	Cluster_4391	Pocillopora_meandrina_HIv1___Sc0000016	3215721	3216149	429	159	34	0.006289308176100629	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	80	0	154	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3276360-3276777	Cluster_4392	Pocillopora_meandrina_HIv1___Sc0000016	3276360	3276777	418	100	3	0.0	-	AAGGUGAACAAAGCGAUA	75	100	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3425021-3425524	Cluster_4393	Pocillopora_meandrina_HIv1___Sc0000016	3425021	3425524	504	1960	173	0.0066326530612244895	-	AGGAUGGACAGUGAUCCAGAAGAGGACGGA	691	87	1748	19	85	15	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3486771-3487189	Cluster_4394	Pocillopora_meandrina_HIv1___Sc0000016	3486771	3487189	419	138	23	0.9637681159420289	+	CGGCCUGAAAAAAAAAAAA	43	99	24	7	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3529474-3529904	Cluster_4395	Pocillopora_meandrina_HIv1___Sc0000016	3529474	3529904	431	382	117	0.8586387434554974	+	GGGAUGGACAGUGAUCCAGAAGAGAAUGGA	50	18	306	34	16	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3635522-3635950	Cluster_4396	Pocillopora_meandrina_HIv1___Sc0000016	3635522	3635950	429	132	51	0.9772727272727273	+	AUGGACAGUGAUCCAGAAGAGAAUGGAUG	31	4	119	6	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3640173-3640599	Cluster_4397	Pocillopora_meandrina_HIv1___Sc0000016	3640173	3640599	427	98	30	0.01020408163265306	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUAAG	22	0	98	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3672284-3672777	Cluster_4398	Pocillopora_meandrina_HIv1___Sc0000016	3672284	3672777	494	228	98	0.7894736842105263	.	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	54	33	164	20	8	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3736896-3737396	Cluster_4399	Pocillopora_meandrina_HIv1___Sc0000016	3736896	3737396	501	432	146	0.011574074074074073	-	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	65	57	298	16	19	26	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3786097-3786594	Cluster_4400	Pocillopora_meandrina_HIv1___Sc0000016	3786097	3786594	498	298	114	0.8590604026845637	+	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	66	21	257	12	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3853179-3853635	Cluster_4401	Pocillopora_meandrina_HIv1___Sc0000016	3853179	3853635	457	398	160	0.8165829145728644	+	UGAAGAGUAUCACGAUUUCUGUCCACAAUGC	47	8	361	3	6	13	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3853803-3854408	Cluster_4402	Pocillopora_meandrina_HIv1___Sc0000016	3853803	3854408	606	1306	352	0.7526799387442573	.	UUUGACGGAAACAGUUAUGGACGGAUCC	63	21	974	35	47	121	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3877356-3877856	Cluster_4403	Pocillopora_meandrina_HIv1___Sc0000016	3877356	3877856	501	312	111	0.009615384615384616	-	GGGAUGGACAGUGAUCCAGGAGAAAAUGG	28	71	193	24	7	14	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3880780-3881529	Cluster_4404	Pocillopora_meandrina_HIv1___Sc0000016	3880780	3881529	750	2223	626	0.09851551956815115	-	UCAUCUGGUGUGAUUGUAUCGUGUGCAC	153	14	2104	7	32	24	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3881973-3882395	Cluster_4405	Pocillopora_meandrina_HIv1___Sc0000016	3881973	3882395	423	143	84	0.1258741258741259	-	UAAAUCUCUCGGGUCAAUACAGAUGCGUA	10	1	137	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3882866-3883292	Cluster_4406	Pocillopora_meandrina_HIv1___Sc0000016	3882866	3883292	427	151	84	0.13245033112582782	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	14	1	131	1	4	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3884381-3884802	Cluster_4407	Pocillopora_meandrina_HIv1___Sc0000016	3884381	3884802	422	127	67	0.09448818897637795	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	14	1	118	0	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3960711-3961139	Cluster_4408	Pocillopora_meandrina_HIv1___Sc0000016	3960711	3961139	429	218	81	0.8027522935779816	+	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	46	15	162	26	6	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3965357-3965785	Cluster_4409	Pocillopora_meandrina_HIv1___Sc0000016	3965357	3965785	429	161	55	0.0	-	GGGAUGGACAGUGAUCCAGGAGAAAAUGG	25	27	127	2	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3984526-3985964	Cluster_4410	Pocillopora_meandrina_HIv1___Sc0000016	3984526	3985964	1439	2629	654	0.9615823507036896	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	233	7	2545	6	18	17	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4504089-4505176	Cluster_4411	Pocillopora_meandrina_HIv1___Sc0000016	4504089	4505176	1088	1784	442	0.9495515695067265	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	216	4	1723	4	15	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4870761-4871167	Cluster_4412	Pocillopora_meandrina_HIv1___Sc0000016	4870761	4871167	407	105	51	0.2761904761904762	.	UUGGCUCCGAAUGAAAGAUCUUGAAUUACA	16	1	91	2	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4964957-4965385	Cluster_4413	Pocillopora_meandrina_HIv1___Sc0000016	4964957	4965385	429	189	40	0.1746031746031746	-	AAAUGAAGCUCUCUUUGGUGAAAAUGUUG	80	2	184	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5158486-5158914	Cluster_4414	Pocillopora_meandrina_HIv1___Sc0000016	5158486	5158914	429	299	99	0.0	-	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	64	1	292	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5159620-5160222	Cluster_4415	Pocillopora_meandrina_HIv1___Sc0000016	5159620	5160222	603	1318	206	0.002276176024279211	-	UCCAAUCCCCACCGAGAAAGUAUUCAAUAUU	504	9	1291	3	1	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5258006-5258425	Cluster_4416	Pocillopora_meandrina_HIv1___Sc0000016	5258006	5258425	420	182	102	0.0	-	GUGCAUGGCUCAGGAUCGCUUGUGAGGAGA	16	71	82	5	11	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5309996-5310407	Cluster_4417	Pocillopora_meandrina_HIv1___Sc0000016	5309996	5310407	412	135	76	0.9703703703703703	+	UAUAUCACUGGAAAGCUUAUGAACUAUA	10	1	125	0	4	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5310474-5311519	Cluster_4418	Pocillopora_meandrina_HIv1___Sc0000016	5310474	5311519	1046	2480	756	0.9455645161290323	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	265	29	2324	16	31	33	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5311535-5313022	Cluster_4419	Pocillopora_meandrina_HIv1___Sc0000016	5311535	5313022	1488	4076	1295	0.8986751717369971	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	155	50	3619	31	27	151	198	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5321552-5321971	Cluster_4420	Pocillopora_meandrina_HIv1___Sc0000016	5321552	5321971	420	154	101	0.9935064935064936	+	CAGUUGAGCUCUGGGAAGCCCA	9	57	38	12	26	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5324658-5325073	Cluster_4421	Pocillopora_meandrina_HIv1___Sc0000016	5324658	5325073	416	358	254	0.9972067039106145	+	CGUGCUAGAGCUGUGUGAGGA	6	93	126	32	46	23	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5325764-5326185	Cluster_4422	Pocillopora_meandrina_HIv1___Sc0000016	5325764	5326185	422	311	223	1.0	+	GCCUUGUAGUAAGCAGAUGACA	16	73	118	29	36	25	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5327727-5328217	Cluster_4423	Pocillopora_meandrina_HIv1___Sc0000016	5327727	5328217	491	441	322	0.9909297052154195	+	UCCGUCUGGGGCUGUUUCUGUGAAGAU	6	113	189	40	41	30	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5329153-5329572	Cluster_4424	Pocillopora_meandrina_HIv1___Sc0000016	5329153	5329572	420	219	163	1.0	+	CGUGUACUCGGACUUACAUUCUGCA	8	43	92	26	17	16	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5329738-5330156	Cluster_4425	Pocillopora_meandrina_HIv1___Sc0000016	5329738	5330156	419	236	176	1.0	+	CCACUGGAGAACUAAACGU	15	84	63	30	30	14	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5330505-5330925	Cluster_4426	Pocillopora_meandrina_HIv1___Sc0000016	5330505	5330925	421	362	246	0.9972375690607734	+	GCGCAGGCAAGCUGGACU	18	119	111	39	22	44	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5331199-5331606	Cluster_4427	Pocillopora_meandrina_HIv1___Sc0000016	5331199	5331606	408	418	332	1.0	+	UGGACCUUGCUGAGUACGGACA	7	98	164	27	49	42	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5331757-5332175	Cluster_4428	Pocillopora_meandrina_HIv1___Sc0000016	5331757	5332175	419	400	299	1.0	+	GAUUCAACAGAACUGCUGA	5	99	147	47	30	48	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5332327-5333027	Cluster_4429	Pocillopora_meandrina_HIv1___Sc0000016	5332327	5333027	701	807	572	0.9987608426270136	+	GUUGAACUCUGAGACUGAAAAAGGACU	12	199	378	71	55	55	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5333537-5334267	Cluster_4430	Pocillopora_meandrina_HIv1___Sc0000016	5333537	5334267	731	859	607	0.9988358556461001	+	UUCUGUCGAUGUCUUGCCCGGAACAGCA	12	187	394	84	77	55	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5334965-5335386	Cluster_4431	Pocillopora_meandrina_HIv1___Sc0000016	5334965	5335386	422	352	247	1.0	+	CCCAUAGUUGGAAAUGUAACCGUC	10	91	129	17	28	47	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5335782-5336460	Cluster_4432	Pocillopora_meandrina_HIv1___Sc0000016	5335782	5336460	679	717	545	1.0	+	AAACAGUUGCGUGCUUUAGAUGUU	6	153	314	68	68	52	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5337451-5337870	Cluster_4433	Pocillopora_meandrina_HIv1___Sc0000016	5337451	5337870	420	413	302	1.0	+	GAAGACUCUCGAGGAACU	6	93	209	42	22	18	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5338024-5339073	Cluster_4434	Pocillopora_meandrina_HIv1___Sc0000016	5338024	5339073	1050	1087	760	1.0	+	AAAACUAAGGCUGUAGUUAUGGCAGAUA	11	255	533	79	77	70	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5339267-5340211	Cluster_4435	Pocillopora_meandrina_HIv1___Sc0000016	5339267	5340211	945	936	701	0.9989316239316239	+	CUCUAUCCAAACUGUUAAUGCUCCACGAU	35	198	467	71	64	64	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5340851-5341260	Cluster_4436	Pocillopora_meandrina_HIv1___Sc0000016	5340851	5341260	410	330	241	1.0	+	GAUAAGCGCUUACAACCUGACUAA	5	82	120	38	27	25	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5341532-5342012	Cluster_4437	Pocillopora_meandrina_HIv1___Sc0000016	5341532	5342012	481	644	420	1.0	+	CGACGAGGAUUGCUGAAAGCUAAGA	15	134	293	61	62	41	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5342025-5342789	Cluster_4438	Pocillopora_meandrina_HIv1___Sc0000016	5342025	5342789	765	849	610	0.9988221436984688	+	CUCGGACUAGGAACUACU	9	222	370	63	66	70	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5343095-5343501	Cluster_4439	Pocillopora_meandrina_HIv1___Sc0000016	5343095	5343501	407	413	306	1.0	+	GGAGAUCGUCUGCGAUGUCGAGCA	10	124	164	35	21	29	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5343803-5344294	Cluster_4440	Pocillopora_meandrina_HIv1___Sc0000016	5343803	5344294	492	364	267	1.0	+	GACCGAAUUUGUGGACUCUUGGGAGGU	6	97	139	42	28	31	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5344478-5344941	Cluster_4441	Pocillopora_meandrina_HIv1___Sc0000016	5344478	5344941	464	578	404	0.9982698961937716	+	GGGGCUUUUGAGCAUCUGAAGUU	8	110	270	51	40	55	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5345592-5346596	Cluster_4442	Pocillopora_meandrina_HIv1___Sc0000016	5345592	5346596	1005	968	633	0.9989669421487604	+	CUUCUCGAUGUUCGAAGAGUAGACUUCAUGA	12	230	440	71	76	86	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6183757-6184303	Cluster_4443	Pocillopora_meandrina_HIv1___Sc0000016	6183757	6184303	547	229	88	0.2183406113537118	.	UGAUUUCUGAUGGAGACUCUAAGUCUU	31	2	205	1	5	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6353412-6353839	Cluster_4444	Pocillopora_meandrina_HIv1___Sc0000016	6353412	6353839	428	651	60	0.978494623655914	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	337	4	642	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6523027-6523703	Cluster_4445	Pocillopora_meandrina_HIv1___Sc0000016	6523027	6523703	677	8265	554	0.003629764065335753	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2154	8	8140	6	45	33	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6523774-6524266	Cluster_4446	Pocillopora_meandrina_HIv1___Sc0000016	6523774	6524266	493	394	257	0.2131979695431472	.	UCCGAUUUUCUCAACCGCCUCUUGUCC	12	8	325	4	2	22	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6558913-6563469	Cluster_4447	Pocillopora_meandrina_HIv1___Sc0000016	6558913	6563469	4557	12165	3630	0.08590217838060009	-	UGACUCUUCAAUCUCUGAAACGACUGCUC	520	117	11248	37	67	245	451	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6777921-6778642	Cluster_4448	Pocillopora_meandrina_HIv1___Sc0000016	6777921	6778642	722	449	156	0.3741648106904232	.	CAAAGUCUCAAUUACCCACUGUCAUUG	62	11	386	4	6	13	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6879376-6880291	Cluster_4449	Pocillopora_meandrina_HIv1___Sc0000016	6879376	6880291	916	987	225	0.11347517730496454	-	UGUGACAGCUCUUUUCCUCCUGCAAAGA	129	5	871	3	14	64	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6885388-6885815	Cluster_4450	Pocillopora_meandrina_HIv1___Sc0000016	6885388	6885815	428	300	83	0.9466666666666667	+	UUGGAACGUGUUGCUGAACGCUUGCUA	58	5	283	2	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6906122-6906540	Cluster_4451	Pocillopora_meandrina_HIv1___Sc0000016	6906122	6906540	419	317	7	0.9968454258675079	+	CAUUAAUGCUGUAGGUGAA	274	316	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6944636-6945050	Cluster_4452	Pocillopora_meandrina_HIv1___Sc0000016	6944636	6945050	415	118	88	1.0	+	AGCUAACCGAAGAAAGACAACUGGAACCGGC	4	35	44	15	9	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7162884-7163339	Cluster_4453	Pocillopora_meandrina_HIv1___Sc0000016	7162884	7163339	456	1788	214	0.0883668903803132	-	UAAGAAAUCUUCCACUGAUCGUUGAGUU	323	14	1710	8	9	11	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7271419-7271841	Cluster_4454	Pocillopora_meandrina_HIv1___Sc0000016	7271419	7271841	423	183	15	1.0	+	UGAUCCUAAAGCAUUUUCUGAAG	80	1	2	3	78	99	0	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7549557-7549654	Cluster_4455	Pocillopora_meandrina_HIv1___Sc0000016	7549557	7549654	98	19451	319	0.9999485887615033	+	UCAGUUCCACCAGCUCACCAAU	5620	2037	16	1007	9107	7250	34	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7549905-7550358	Cluster_4456	Pocillopora_meandrina_HIv1___Sc0000016	7549905	7550358	454	12259	262	1.0	+	UCAGUUCCACCAGCUCACCAAU	3520	1213	36	977	5348	4540	145	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7550593-7550685	Cluster_4457	Pocillopora_meandrina_HIv1___Sc0000016	7550593	7550685	93	88573	511	1.0	+	UCAGUCCCACCAUCUCACCAAU	40422	12705	185	7581	60327	7492	283	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7553282-7553379	Cluster_4458	Pocillopora_meandrina_HIv1___Sc0000016	7553282	7553379	98	5093	224	0.9998036520714706	+	AGGUGAGCUGUGGGAACUCUUA	2477	385	37	797	3212	568	94	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7555639-7555733	Cluster_4459	Pocillopora_meandrina_HIv1___Sc0000016	7555639	7555733	95	15879	277	1.0	+	UCAGUCCCACCAGCUCACCAAU	3822	3431	42	3677	5612	3055	62	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7556180-7556602	Cluster_4460	Pocillopora_meandrina_HIv1___Sc0000016	7556180	7556602	423	642	81	0.9984423676012462	+	UCAGUUCCACCAGCUCACCAAU	168	83	24	38	280	211	6	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7702668-7703451	Cluster_4461	Pocillopora_meandrina_HIv1___Sc0000016	7702668	7703451	784	2477	177	0.031489705288655634	-	UCGGACUGUGCAUAACCAUUUGCAAAC	1245	105	2175	4	3	73	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7737325-7737742	Cluster_4462	Pocillopora_meandrina_HIv1___Sc0000016	7737325	7737742	418	90	23	0.9333333333333333	+	GGAGGGGGAGAGCUCUCUUG	47	76	8	2	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7925012-7925738	Cluster_4463	Pocillopora_meandrina_HIv1___Sc0000016	7925012	7925738	727	654	208	0.06269113149847094	-	UGAUAAACCUGUAGCUGAAGCUUCUGCA	82	4	617	3	11	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7981204-7981630	Cluster_4464	Pocillopora_meandrina_HIv1___Sc0000016	7981204	7981630	427	86	25	0.0	-	CAGUAUCCUUGUCUUCUGUUGAUGUGUC	21	0	83	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8190424-8190842	Cluster_4465	Pocillopora_meandrina_HIv1___Sc0000016	8190424	8190842	419	207	104	0.9903381642512077	+	UUCCAACAUUAGUAAAAGGUG	18	1	184	20	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8193241-8193668	Cluster_4466	Pocillopora_meandrina_HIv1___Sc0000016	8193241	8193668	428	170	73	0.9705882352941176	+	UGAAUGCGUAACAUAACUCCGAUCGAGU	33	4	165	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8231118-8231587	Cluster_4467	Pocillopora_meandrina_HIv1___Sc0000016	8231118	8231587	470	224	103	0.7053571428571429	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	28	8	187	1	1	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8250838-8251332	Cluster_4468	Pocillopora_meandrina_HIv1___Sc0000016	8250838	8251332	495	1066	218	0.036585365853658534	-	UGUAAUCUCAAUAUCUACCUCUUGACA	260	6	1025	3	23	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8251378-8252098	Cluster_4469	Pocillopora_meandrina_HIv1___Sc0000016	8251378	8252098	721	1060	304	0.9235849056603773	+	UCUUCGUUUUGUACAAAUUCCCACCGA	189	6	1017	3	2	9	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8274017-8274445	Cluster_4470	Pocillopora_meandrina_HIv1___Sc0000016	8274017	8274445	429	144	39	0.034722222222222224	-	AUCUAAACGAACUUGUUUUUCUUAUGAGCA	50	0	137	1	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8355046-8355474	Cluster_4471	Pocillopora_meandrina_HIv1___Sc0000016	8355046	8355474	429	200	51	0.06	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	75	0	187	0	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8546527-8546993	Cluster_4472	Pocillopora_meandrina_HIv1___Sc0000016	8546527	8546993	467	165	76	0.9272727272727272	+	UAAUCGCAACAGGGAAACUAGACUCCGA	21	2	152	1	2	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8551184-8552319	Cluster_4473	Pocillopora_meandrina_HIv1___Sc0000016	8551184	8552319	1136	2875	601	0.9238260869565217	+	UAACACAAUGAACCAAGGCACGUCCAGA	498	19	2739	4	10	41	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8602282-8602686	Cluster_4474	Pocillopora_meandrina_HIv1___Sc0000016	8602282	8602686	405	156	77	0.6730769230769231	.	UAUGACCGUUUGAAUCAGCCCAUGUACA	21	80	53	18	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8637809-8638451	Cluster_4475	Pocillopora_meandrina_HIv1___Sc0000016	8637809	8638451	643	1312	303	0.006859756097560976	-	UAGGCGUAAAUCUUGACUCCGAUCGACUAA	134	29	1261	3	1	2	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8955875-8956296	Cluster_4476	Pocillopora_meandrina_HIv1___Sc0000016	8955875	8956296	422	107	50	0.9906542056074766	+	CAUGUAGUUACUCAGGAAGAAGUC	27	8	46	2	12	2	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:9066859-9067275	Cluster_4477	Pocillopora_meandrina_HIv1___Sc0000016	9066859	9067275	417	99	7	0.0	-	GAGCUGUGACCCUCGGGC	51	99	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:52305-52730	Cluster_4478	Pocillopora_meandrina_HIv1___Sc0000017	52305	52730	426	104	39	0.9807692307692307	+	UCCGAUUUAAAAGAUUCUUUGUUUGU	29	0	98	0	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:210371-210800	Cluster_4479	Pocillopora_meandrina_HIv1___Sc0000017	210371	210800	430	468	122	0.9636752136752137	+	UGUAGAAUCAAUCUGUUACUAAGACACC	109	4	444	11	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:221304-221728	Cluster_4480	Pocillopora_meandrina_HIv1___Sc0000017	221304	221728	425	148	108	0.75	.	UAAAGUUUACUUGUUGUUCUUCUCUG	9	21	94	13	4	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:390054-390665	Cluster_4481	Pocillopora_meandrina_HIv1___Sc0000017	390054	390665	612	617	140	0.5542949756888168	.	UCACUCGUAAAGAAUCGCUCGUAAAUUGAUC	172	18	553	7	5	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:396273-396699	Cluster_4482	Pocillopora_meandrina_HIv1___Sc0000017	396273	396699	427	160	53	0.1375	-	UGUCAAAUUCUCGUCUUCCUAACCUUU	62	0	156	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:399056-399466	Cluster_4483	Pocillopora_meandrina_HIv1___Sc0000017	399056	399466	411	108	39	0.4166666666666667	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	23	1	106	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:404683-405111	Cluster_4484	Pocillopora_meandrina_HIv1___Sc0000017	404683	405111	429	188	34	0.010638297872340425	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	93	0	188	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:405753-406179	Cluster_4485	Pocillopora_meandrina_HIv1___Sc0000017	405753	406179	427	170	55	0.052941176470588235	-	UAAGACCCAUCCAUCACUAUCAACUCG	33	1	168	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:406224-406708	Cluster_4486	Pocillopora_meandrina_HIv1___Sc0000017	406224	406708	485	1786	212	0.0011198208286674132	-	UGGACAAAUUCAUAGGUCUGAUGCAAACAUG	348	31	1725	7	8	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:483166-484666	Cluster_4487	Pocillopora_meandrina_HIv1___Sc0000017	483166	484666	1501	2953	665	0.9492041991195395	+	UAGGAACACGAGAAGAUCUAGAAGAAACUCU	279	44	2758	9	36	57	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:484886-485551	Cluster_4488	Pocillopora_meandrina_HIv1___Sc0000017	484886	485551	666	593	296	0.5733558178752108	.	AUAAGAGAUAUAAACUUCUGAAAGCCUGUG	21	7	534	0	6	18	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:485566-486336	Cluster_4489	Pocillopora_meandrina_HIv1___Sc0000017	485566	486336	771	2504	539	0.90814696485623	+	UGGAUAUACGUACACAAUCUAGGCUAA	789	18	2402	10	7	17	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:566559-566986	Cluster_4490	Pocillopora_meandrina_HIv1___Sc0000017	566559	566986	428	90	11	0.044444444444444446	-	UCGGAUAUAAGGCGGUUAUCAAGCGCUUA	53	1	83	4	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:575298-575843	Cluster_4491	Pocillopora_meandrina_HIv1___Sc0000017	575298	575843	546	672	283	0.3020833333333333	.	UGAUUACAACUUCCGAGGCCGUCGUGUC	33	3	614	9	4	11	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:584231-584640	Cluster_4492	Pocillopora_meandrina_HIv1___Sc0000017	584231	584640	410	71	24	0.9436619718309859	+	UUGUGUAAUUGUUUUAUUCCGCCACGU	21	0	69	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:591378-591902	Cluster_4493	Pocillopora_meandrina_HIv1___Sc0000017	591378	591902	525	233	90	0.3218884120171674	.	GCAACGGAAAUUGUCUGUUCCUCGUUUGGGU	38	7	197	5	4	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:771548-771953	Cluster_4494	Pocillopora_meandrina_HIv1___Sc0000017	771548	771953	406	110	76	1.0	+	GACAGUUGUUCUGUGUGUGU	6	41	40	11	5	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:773596-774101	Cluster_4495	Pocillopora_meandrina_HIv1___Sc0000017	773596	774101	506	371	257	1.0	+	GCGGUGUCGUUGCUCAGACA	9	99	143	32	26	25	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:784268-784713	Cluster_4496	Pocillopora_meandrina_HIv1___Sc0000017	784268	784713	446	276	61	0.5905797101449275	.	UAAGAUCUGAUACAUUCUUUGGCGGUG	60	1	270	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:788139-788564	Cluster_4497	Pocillopora_meandrina_HIv1___Sc0000017	788139	788564	426	71	19	0.014084507042253521	-	UUGCAAUUGAAGACGAUCUCGGGCGCCCA	43	0	70	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:862335-862763	Cluster_4498	Pocillopora_meandrina_HIv1___Sc0000017	862335	862763	429	87	22	0.04597701149425287	-	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	40	4	77	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1204139-1204546	Cluster_4499	Pocillopora_meandrina_HIv1___Sc0000017	1204139	1204546	408	107	66	0.0	-	GGGCUGGACAGUGUUUCAGAAGAGACUGGAC	5	16	65	6	3	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1303712-1304136	Cluster_4500	Pocillopora_meandrina_HIv1___Sc0000017	1303712	1304136	425	86	35	0.9883720930232558	+	UUCUUCUACCACUUCUUUUUCAAACAAUGU	22	1	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1312166-1312771	Cluster_4501	Pocillopora_meandrina_HIv1___Sc0000017	1312166	1312771	606	327	185	0.6085626911314985	.	UGAGAUCGUGGAAGGCCAAGUUCCUUGC	28	7	302	6	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1324597-1325023	Cluster_4502	Pocillopora_meandrina_HIv1___Sc0000017	1324597	1325023	427	182	76	0.01098901098901099	-	UUUGAUUGACGUACGGUAUUUGAGACGC	18	3	172	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1379429-1379855	Cluster_4503	Pocillopora_meandrina_HIv1___Sc0000017	1379429	1379855	427	111	31	0.8018018018018018	+	UACGUAACUUUCGGUUUUUCUUUCCGUA	31	2	108	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1550842-1551662	Cluster_4504	Pocillopora_meandrina_HIv1___Sc0000017	1550842	1551662	821	1232	124	0.648538961038961	.	UCUUGUCAAUUCUGUCCAGGGUGAACCA	513	8	1215	1	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1612900-1613329	Cluster_4505	Pocillopora_meandrina_HIv1___Sc0000017	1612900	1613329	430	359	59	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	146	0	358	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1631655-1632082	Cluster_4506	Pocillopora_meandrina_HIv1___Sc0000017	1631655	1632082	428	244	38	0.9549180327868853	+	UAAAGUGUAUAAAAUGGGCUUCUCAGGA	174	0	242	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1636696-1637949	Cluster_4507	Pocillopora_meandrina_HIv1___Sc0000017	1636696	1637949	1254	1030	408	0.9980582524271845	+	UCUGCAACGGACUUCUAAGGGGUAAAGGC	63	8	999	1	4	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1638965-1639903	Cluster_4508	Pocillopora_meandrina_HIv1___Sc0000017	1638965	1639903	939	603	224	0.9966832504145937	+	UAUCUUGAACUCUGUAAUGAUGGGUGAC	89	6	584	2	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1641559-1642075	Cluster_4509	Pocillopora_meandrina_HIv1___Sc0000017	1641559	1642075	517	7864	337	1.0	+	UGUGUCGAGCUUCUCUUGUAGCAGGAGU	3044	64	7707	3	58	25	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1661006-1661433	Cluster_4510	Pocillopora_meandrina_HIv1___Sc0000017	1661006	1661433	428	121	13	0.9752066115702479	+	UACCAAGGUCUUGUAGUCUAGUACAACU	73	0	121	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1662584-1663020	Cluster_4511	Pocillopora_meandrina_HIv1___Sc0000017	1662584	1663020	437	501	138	0.015968063872255488	-	UGCGAAAGAAACAGGGAAAGUUUGACGAUG	56	2	443	1	10	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1693895-1694327	Cluster_4512	Pocillopora_meandrina_HIv1___Sc0000017	1693895	1694327	433	339	100	0.7551622418879056	.	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	49	0	327	2	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1789680-1790121	Cluster_4513	Pocillopora_meandrina_HIv1___Sc0000017	1789680	1790121	442	312	45	0.9743589743589743	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	155	2	303	1	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1793808-1794253	Cluster_4514	Pocillopora_meandrina_HIv1___Sc0000017	1793808	1794253	446	757	75	0.15191545574636725	-	GUGUAGAUCAGCCGACUUCAACAUGUUU	423	2	731	1	4	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1838158-1838632	Cluster_4515	Pocillopora_meandrina_HIv1___Sc0000017	1838158	1838632	475	322	116	0.9968944099378882	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	46	2	318	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1891306-1891734	Cluster_4516	Pocillopora_meandrina_HIv1___Sc0000017	1891306	1891734	429	86	27	0.023255813953488372	-	CUGGUUCAAACAACGAUCGAGUGGUCAUU	37	1	84	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1900038-1900467	Cluster_4517	Pocillopora_meandrina_HIv1___Sc0000017	1900038	1900467	430	364	56	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	133	1	361	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1926176-1926677	Cluster_4518	Pocillopora_meandrina_HIv1___Sc0000017	1926176	1926677	502	719	134	0.541029207232267	.	UAAAGUGUAUAAAAUGGGCUUCUCAGGA	128	8	682	3	21	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1933470-1933898	Cluster_4519	Pocillopora_meandrina_HIv1___Sc0000017	1933470	1933898	429	175	40	0.011428571428571429	-	UUCUAAGUGUCGCUGAUGUGGGGACUAUU	45	6	166	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2080328-2080757	Cluster_4520	Pocillopora_meandrina_HIv1___Sc0000017	2080328	2080757	430	331	46	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	142	1	329	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2089210-2089703	Cluster_4521	Pocillopora_meandrina_HIv1___Sc0000017	2089210	2089703	494	517	179	0.988394584139265	+	UCCAAGGAUCUUAUCGACCUCAUCGUAGUA	105	0	499	2	0	0	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2113862-2114291	Cluster_4522	Pocillopora_meandrina_HIv1___Sc0000017	2113862	2114291	430	213	67	0.028169014084507043	-	UAAGAUAUCGUUAACAACUCGAAGAAGCG	43	0	212	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2117046-2117463	Cluster_4523	Pocillopora_meandrina_HIv1___Sc0000017	2117046	2117463	418	78	15	0.0	-	AGGAUGGACAGUGAUCCAGAAA	47	17	7	0	54	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2186612-2187049	Cluster_4524	Pocillopora_meandrina_HIv1___Sc0000017	2186612	2187049	438	39278	464	2.5459544783339274e-05	-	UGGAUGGACUGUGUUCCAGAAGAGACAGG	16268	141	38552	13	549	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2206514-2206944	Cluster_4525	Pocillopora_meandrina_HIv1___Sc0000017	2206514	2206944	431	2282	143	0.9991235758106923	+	AGGAUGGACAGUGUUCCAAAAG	1117	16	943	6	1305	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2220748-2221175	Cluster_4526	Pocillopora_meandrina_HIv1___Sc0000017	2220748	2221175	428	92	27	1.0	+	AGGAUGGACAGUGUUCCAAAAGAGACUGG	24	0	69	0	21	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2455876-2456293	Cluster_4527	Pocillopora_meandrina_HIv1___Sc0000017	2455876	2456293	418	182	4	1.0	+	UGGCCUGAAAAAAAAAAA	177	181	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2473930-2474359	Cluster_4528	Pocillopora_meandrina_HIv1___Sc0000017	2473930	2474359	430	234	39	0.008547008547008548	-	ACAGUCAGUCUAUUAUGCAACGCACCCAAU	120	2	226	2	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2489758-2490243	Cluster_4529	Pocillopora_meandrina_HIv1___Sc0000017	2489758	2490243	486	288	118	0.0	-	UCUGACCAGUAAUAUUAAGUUUGUAUGAUC	26	1	284	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2494345-2495070	Cluster_4530	Pocillopora_meandrina_HIv1___Sc0000017	2494345	2495070	726	2089	281	0.21014839636189564	.	UAUAUGACGAUUUGUACAAAAUGAUGGAC	463	15	1877	34	39	41	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2498020-2498449	Cluster_4531	Pocillopora_meandrina_HIv1___Sc0000017	2498020	2498449	430	164	57	0.0	-	UGUAUAUGGUGGAUUGCCAAUGACGGGCGUU	45	1	160	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2543956-2544376	Cluster_4532	Pocillopora_meandrina_HIv1___Sc0000017	2543956	2544376	421	111	87	0.02702702702702703	-	GCGCUGGACUCUGGGUCGGACGGCCCGU	3	32	56	7	5	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2694841-2695270	Cluster_4533	Pocillopora_meandrina_HIv1___Sc0000017	2694841	2695270	430	176	35	0.0	-	UAAUGUGUGACUUUUUCGCUUUUGUUUUGA	81	0	176	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2737275-2737704	Cluster_4534	Pocillopora_meandrina_HIv1___Sc0000017	2737275	2737704	430	191	28	0.010471204188481676	-	UUCACUCCAGAAUGUUUGGCCUCUUUAGCC	134	1	189	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2780735-2781180	Cluster_4535	Pocillopora_meandrina_HIv1___Sc0000017	2780735	2781180	446	1590	223	0.1861635220125786	-	UCCUUCACUCCAGAAUGUUUGGCCUCU	149	15	1423	9	5	72	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2985643-2986055	Cluster_4536	Pocillopora_meandrina_HIv1___Sc0000017	2985643	2986055	413	82	52	0.9878048780487805	+	AUCGAUCCAGCAAAGUGUAGGCA	8	13	26	4	11	19	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2989912-2990352	Cluster_4537	Pocillopora_meandrina_HIv1___Sc0000017	2989912	2990352	441	418	278	1.0	+	CCAGGCUGGCUGAGUGACG	10	171	119	35	37	31	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2993139-2993881	Cluster_4538	Pocillopora_meandrina_HIv1___Sc0000017	2993139	2993881	743	376	275	1.0	+	AACUACCAAGUUCUGAGCGAAAAUGAU	7	120	113	49	31	30	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2995620-2996047	Cluster_4539	Pocillopora_meandrina_HIv1___Sc0000017	2995620	2996047	428	434	272	1.0	+	ACGAAUCGUUGUGGCACAGAUGCUCCA	23	127	185	35	28	26	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3046579-3046987	Cluster_4540	Pocillopora_meandrina_HIv1___Sc0000017	3046579	3046987	409	95	74	0.0	-	GUACUAGACUGUAAGCCA	4	25	45	1	6	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3160389-3161248	Cluster_4541	Pocillopora_meandrina_HIv1___Sc0000017	3160389	3161248	860	427	221	0.6463700234192038	.	UCUAACGGAUACAGCUGCUGUACUGCU	31	24	349	4	8	16	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3161421-3161847	Cluster_4542	Pocillopora_meandrina_HIv1___Sc0000017	3161421	3161847	427	216	92	0.7731481481481481	.	UCACGAAUCUUUGCCAUUGUGAGGCUCACU	24	4	199	2	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3163210-3164062	Cluster_4543	Pocillopora_meandrina_HIv1___Sc0000017	3163210	3164062	853	1288	228	0.08618012422360248	-	CGUGUACGACGCCUCUGCCCGAGCUUCAG	372	12	1238	22	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3164686-3165315	Cluster_4544	Pocillopora_meandrina_HIv1___Sc0000017	3164686	3165315	630	544	239	0.6488970588235294	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	49	3	522	2	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3210425-3210843	Cluster_4545	Pocillopora_meandrina_HIv1___Sc0000017	3210425	3210843	419	97	13	1.0	+	GUGUGUGUCUUUUUUCUCU	58	90	1	6	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3343078-3344855	Cluster_4546	Pocillopora_meandrina_HIv1___Sc0000017	3343078	3344855	1778	2775	1093	0.96	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	93	25	2636	15	18	42	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3563626-3564054	Cluster_4547	Pocillopora_meandrina_HIv1___Sc0000017	3563626	3564054	429	363	92	0.0	-	AAGGAAAUUAAUGAUUGUAUAUGUGAGG	48	5	343	1	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3564620-3565836	Cluster_4548	Pocillopora_meandrina_HIv1___Sc0000017	3564620	3565836	1217	2127	320	0.0009402914903620122	-	UGACAAUCAAACCAUGGACAAACUAAUUUGU	192	15	1961	6	64	19	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3581223-3581652	Cluster_4549	Pocillopora_meandrina_HIv1___Sc0000017	3581223	3581652	430	1859	91	0.0005379236148466917	-	AGUAGAUGCAGUUAGGAAUAAAAUUUUGGA	880	5	1832	4	12	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3581866-3582294	Cluster_4550	Pocillopora_meandrina_HIv1___Sc0000017	3581866	3582294	429	228	46	0.07456140350877193	-	AAGAGAAUCAAGAGCCUGUGCUCCGCGGC	90	5	211	1	6	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3621125-3621525	Cluster_4551	Pocillopora_meandrina_HIv1___Sc0000017	3621125	3621525	401	90	44	0.0	-	GAGUACAUGGACUAUCGAUUCUUCAAGGAU	17	11	70	0	1	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3700714-3701141	Cluster_4552	Pocillopora_meandrina_HIv1___Sc0000017	3700714	3701141	428	107	31	0.07476635514018691	-	UUUUCAGUAAUUAUGCCAAGCACUCAUCGUC	33	0	103	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3979364-3979927	Cluster_4553	Pocillopora_meandrina_HIv1___Sc0000017	3979364	3979927	564	628	323	0.4394904458598726	.	UUUAUCUGGAUGUACAUUGG	28	351	19	180	48	21	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3981302-3981865	Cluster_4554	Pocillopora_meandrina_HIv1___Sc0000017	3981302	3981865	564	712	313	0.39325842696629215	.	UCUUCCACUCGGCCAUCGUAG	37	412	4	213	61	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4136569-4136996	Cluster_4555	Pocillopora_meandrina_HIv1___Sc0000017	4136569	4136996	428	95	17	0.031578947368421054	-	AACUACUGCUCGUGCUCUAGAUAUGACA	34	0	93	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4143141-4143569	Cluster_4556	Pocillopora_meandrina_HIv1___Sc0000017	4143141	4143569	429	294	42	0.9863945578231292	+	AUUGUCUUUAUGGAUCUACUAGGCCAAA	112	0	294	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4180491-4181079	Cluster_4557	Pocillopora_meandrina_HIv1___Sc0000017	4180491	4181079	589	399	199	0.047619047619047616	-	UGCAGUAUUCCAAGGAACUUCUUUGA	48	13	373	3	1	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4181357-4182481	Cluster_4558	Pocillopora_meandrina_HIv1___Sc0000017	4181357	4182481	1125	1119	506	0.18141197497765862	-	UAUGACGUUCCAGAAUCUUUGACAAAA	44	36	995	6	15	30	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4183016-4183444	Cluster_4559	Pocillopora_meandrina_HIv1___Sc0000017	4183016	4183444	429	142	40	0.007042253521126761	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	28	0	140	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4220685-4221103	Cluster_4560	Pocillopora_meandrina_HIv1___Sc0000017	4220685	4221103	419	92	12	1.0	+	CGGCUUGAAAAAAAAAAAA	20	54	2	15	8	13	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4261931-4262359	Cluster_4561	Pocillopora_meandrina_HIv1___Sc0000017	4261931	4262359	429	162	29	1.0	+	GGUGCCUUUGAUGUCUACUGUGACCAGACA	53	0	161	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4272965-4274237	Cluster_4562	Pocillopora_meandrina_HIv1___Sc0000017	4272965	4274237	1273	3165	912	0.8777251184834123	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	350	20	2961	20	19	30	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4274424-4277297	Cluster_4563	Pocillopora_meandrina_HIv1___Sc0000017	4274424	4277297	2874	6650	2254	0.7872180451127819	.	UGAACUCGUGCAACAUCUUGAAGGACA	315	65	5921	71	54	213	326	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4311274-4311701	Cluster_4564	Pocillopora_meandrina_HIv1___Sc0000017	4311274	4311701	428	210	80	0.9619047619047619	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	96	2	202	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4313732-4314141	Cluster_4565	Pocillopora_meandrina_HIv1___Sc0000017	4313732	4314141	410	337	191	0.7804154302670623	.	CGCGGUUACAAAGAAGAUGACAGA	19	1	280	3	3	11	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4314952-4315377	Cluster_4566	Pocillopora_meandrina_HIv1___Sc0000017	4314952	4315377	426	233	103	0.7253218884120172	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	23	9	202	3	3	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4365732-4366160	Cluster_4567	Pocillopora_meandrina_HIv1___Sc0000017	4365732	4366160	429	190	61	1.0	+	GGGGUGGGCAGUUUUUCAAAAGAGAAUGGA	31	14	132	13	12	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4401446-4402222	Cluster_4568	Pocillopora_meandrina_HIv1___Sc0000017	4401446	4402222	777	569	137	0.3884007029876977	.	CCUUUCUACAUCUCUGGCUGCAG	82	9	277	51	5	88	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4404038-4404654	Cluster_4569	Pocillopora_meandrina_HIv1___Sc0000017	4404038	4404654	617	943	279	0.9353128313891834	+	UUCGAGCUAUCACUGAAAGAGGGAGUGGU	88	15	905	3	4	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4459675-4460103	Cluster_4570	Pocillopora_meandrina_HIv1___Sc0000017	4459675	4460103	429	115	36	0.0	-	UGACUCAUCUUUUCUUAUUAUUUCUGGCU	24	1	96	5	2	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4482223-4482640	Cluster_4571	Pocillopora_meandrina_HIv1___Sc0000017	4482223	4482640	418	101	48	0.7227722772277227	.	UUCGCUGUUAGCUUUGUUCUCUGU	15	3	62	3	2	5	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4517327-4517754	Cluster_4572	Pocillopora_meandrina_HIv1___Sc0000017	4517327	4517754	428	208	63	0.0	-	UGGACGGUGUUUCAGAGGAGACUGGAUG	32	2	169	1	3	6	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4573969-4574396	Cluster_4573	Pocillopora_meandrina_HIv1___Sc0000017	4573969	4574396	428	155	47	0.0064516129032258064	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	29	0	148	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4618885-4619312	Cluster_4574	Pocillopora_meandrina_HIv1___Sc0000017	4618885	4619312	428	121	32	0.0	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	20	1	118	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4623169-4623669	Cluster_4575	Pocillopora_meandrina_HIv1___Sc0000017	4623169	4623669	501	512	124	0.634765625	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	167	31	424	25	16	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4693308-4693732	Cluster_4576	Pocillopora_meandrina_HIv1___Sc0000017	4693308	4693732	425	213	106	0.7230046948356808	.	UCGAUUCCACCGAAAGAAAUAACCUGUA	27	33	139	17	8	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4702871-4703296	Cluster_4577	Pocillopora_meandrina_HIv1___Sc0000017	4702871	4703296	426	105	29	0.02857142857142857	-	CCGGCUAAAAAAAAAAAAAAAAAAAAA	16	1	87	1	2	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4707666-4708094	Cluster_4578	Pocillopora_meandrina_HIv1___Sc0000017	4707666	4708094	429	195	72	1.0	+	GUGUUUCAAAAAAGACAGGAUGGCUCGGU	33	6	186	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4742250-4742677	Cluster_4579	Pocillopora_meandrina_HIv1___Sc0000017	4742250	4742677	428	164	58	0.9817073170731707	+	GGGGUGGACGGUGUUCCAAAAGAGACUG	30	6	141	1	10	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4763452-4763881	Cluster_4580	Pocillopora_meandrina_HIv1___Sc0000017	4763452	4763881	430	227	69	0.973568281938326	+	GGGGUGGACGGUGUUCCAAAAGAGACUG	37	3	209	3	6	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4787179-4787608	Cluster_4581	Pocillopora_meandrina_HIv1___Sc0000017	4787179	4787608	430	94	10	0.9787234042553191	+	CACAAGACAAGACUCAGUAUUCGCAAGUUG	75	7	84	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4866060-4866489	Cluster_4582	Pocillopora_meandrina_HIv1___Sc0000017	4866060	4866489	430	372	25	0.008064516129032258	-	AAGAUGUCGAGCGUUAGUUUCCAAACGGG	157	4	364	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4883414-4883842	Cluster_4583	Pocillopora_meandrina_HIv1___Sc0000017	4883414	4883842	429	391	117	0.0025575447570332483	-	GCGUCGGUGGUAUAGUGGUGAGCAUAGCU	78	39	310	5	24	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4969812-4970227	Cluster_4584	Pocillopora_meandrina_HIv1___Sc0000017	4969812	4970227	416	68	14	0.0	-	CGGCCUGAAAAAAAAAGA	14	31	36	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5041786-5042306	Cluster_4585	Pocillopora_meandrina_HIv1___Sc0000017	5041786	5042306	521	2565	383	0.0	-	UUGCACUGUGAAAAUCUGACA	1176	147	693	1388	58	119	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5050908-5051000	Cluster_4586	Pocillopora_meandrina_HIv1___Sc0000017	5050908	5051000	93	132750	610	0.0	-	AACUGCUGAGAUUCUAUGGAUUU	47680	4764	285	1096	22198	101160	3247	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000017:5144143-5144576	Cluster_4587	Pocillopora_meandrina_HIv1___Sc0000017	5144143	5144576	434	2311	146	1.0	+	UGGCUGGACAGUAUUUCAGAAGAGACUUG	1275	9	2293	1	5	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5582995-5583419	Cluster_4588	Pocillopora_meandrina_HIv1___Sc0000017	5582995	5583419	425	76	26	0.02631578947368421	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	34	1	74	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5636506-5636911	Cluster_4589	Pocillopora_meandrina_HIv1___Sc0000017	5636506	5636911	406	382	222	0.806282722513089	+	UCCGAUUUUCUCAACCGCCUCUUGUCC	10	7	312	5	5	16	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5637069-5637746	Cluster_4590	Pocillopora_meandrina_HIv1___Sc0000017	5637069	5637746	678	8068	553	0.995785820525533	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2143	10	7942	5	45	26	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5824989-5825524	Cluster_4591	Pocillopora_meandrina_HIv1___Sc0000017	5824989	5825524	536	1917	386	0.0	-	UUGGUCUUCUGGCUUCAACAUUA	469	158	645	135	192	604	183	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5874595-5875018	Cluster_4592	Pocillopora_meandrina_HIv1___Sc0000017	5874595	5875018	424	95	34	0.30526315789473685	.	CCAAUACCGAAACAACAUAGAUGAACUAAC	19	0	90	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5875339-5875766	Cluster_4593	Pocillopora_meandrina_HIv1___Sc0000017	5875339	5875766	428	446	95	0.9282511210762332	+	UGUUGUGCUUUUUGUUUGUCUUUGAAAA	165	1	430	2	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5875966-5876475	Cluster_4594	Pocillopora_meandrina_HIv1___Sc0000017	5875966	5876475	510	444	97	0.9617117117117117	+	AACUACUGCUCGUACUCUAGAUAUGAC	68	16	416	3	1	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6108360-6108792	Cluster_4595	Pocillopora_meandrina_HIv1___Sc0000017	6108360	6108792	433	557	114	0.9748653500897666	+	AUCUCGGUGGGACCUCCG	216	436	13	19	37	42	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6109021-6109449	Cluster_4596	Pocillopora_meandrina_HIv1___Sc0000017	6109021	6109449	429	224	85	0.0	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	38	43	110	10	9	23	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6109524-6110002	Cluster_4597	Pocillopora_meandrina_HIv1___Sc0000017	6109524	6110002	479	779	317	0.029525032092426188	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	83	245	351	70	55	37	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6397578-6397978	Cluster_4598	Pocillopora_meandrina_HIv1___Sc0000017	6397578	6397978	401	73	18	0.0547945205479452	-	UAAGAAAAGCGCAAAUGUAGUCAUGUGGA	22	0	73	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6534177-6534577	Cluster_4599	Pocillopora_meandrina_HIv1___Sc0000017	6534177	6534577	401	188	137	0.015957446808510637	-	AAACUGAUUCCUUAAACUGC	9	25	106	12	14	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6694333-6694803	Cluster_4600	Pocillopora_meandrina_HIv1___Sc0000017	6694333	6694803	471	2086	248	0.0	-	GAUAUAAUUCUGCAAUGAUGAGGACA	390	296	1308	123	130	87	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6939467-6939874	Cluster_4601	Pocillopora_meandrina_HIv1___Sc0000017	6939467	6939874	408	251	143	0.6613545816733067	.	UCUUGUUGUGAGCGUGGAACA	28	75	25	106	19	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6950784-6951208	Cluster_4602	Pocillopora_meandrina_HIv1___Sc0000017	6950784	6951208	425	120	45	0.975	+	UGCCAAGCGAUGGAAAGGGAGGAAGAGA	28	5	105	2	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7031276-7033410	Cluster_4603	Pocillopora_meandrina_HIv1___Sc0000017	7031276	7033410	2135	6250	1212	0.03568	-	UGUAAUACAAAGUCAUGUGCCACCUCUGC	317	52	6005	11	20	62	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7034028-7034455	Cluster_4604	Pocillopora_meandrina_HIv1___Sc0000017	7034028	7034455	428	245	55	0.12653061224489795	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	111	0	219	0	1	1	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7034719-7035146	Cluster_4605	Pocillopora_meandrina_HIv1___Sc0000017	7034719	7035146	428	120	43	0.025	-	UACAAGACGUACUGGAGAGCAUUGAACAAAU	21	2	116	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7036864-7037297	Cluster_4606	Pocillopora_meandrina_HIv1___Sc0000017	7036864	7037297	434	324	106	0.4074074074074074	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	61	1	295	3	1	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7102000-7102417	Cluster_4607	Pocillopora_meandrina_HIv1___Sc0000017	7102000	7102417	418	97	14	0.9381443298969072	+	CCUUUGUUCUAAGAUUUGC	37	81	6	8	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7103692-7104222	Cluster_4608	Pocillopora_meandrina_HIv1___Sc0000017	7103692	7104222	531	955	327	0.0	-	CAUCUCCACUCUAGCCCAUCUGU	72	172	278	182	72	167	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7115531-7115956	Cluster_4609	Pocillopora_meandrina_HIv1___Sc0000017	7115531	7115956	426	296	211	0.0	-	CAGACUGGGAGCUACUUGCUUUA	6	76	123	22	21	31	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7213310-7213741	Cluster_4610	Pocillopora_meandrina_HIv1___Sc0000017	7213310	7213741	432	1905	171	0.0031496062992125984	-	UGAAAGGACAUUUACAUUUGAGGAUGG	292	33	1780	49	12	21	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7235288-7235729	Cluster_4611	Pocillopora_meandrina_HIv1___Sc0000017	7235288	7235729	442	318	68	0.5849056603773585	.	UCAAAUAAGGUUGCAUGAGCCUCAUGACC	127	4	292	2	1	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7254938-7255365	Cluster_4612	Pocillopora_meandrina_HIv1___Sc0000017	7254938	7255365	428	200	53	0.06	-	GUGUGACUCAAGUAAUGGUUAUUGUUGU	56	3	185	2	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7255604-7257692	Cluster_4613	Pocillopora_meandrina_HIv1___Sc0000017	7255604	7257692	2089	6364	1440	0.9362036455059711	+	UUAAAUGAAGUUUCCAAUGUUUGACUGUC	947	49	5961	29	38	144	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7257721-7258847	Cluster_4614	Pocillopora_meandrina_HIv1___Sc0000017	7257721	7258847	1127	1902	595	0.9458464773922187	+	UGAGCUAUUUCGUUGAUCGUAUCACUGAU	119	34	1797	15	10	16	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7299625-7300051	Cluster_4615	Pocillopora_meandrina_HIv1___Sc0000017	7299625	7300051	427	163	65	0.0	-	UUUGAUUGACGUACGGUAUUUGAGACGC	22	0	155	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7302129-7302556	Cluster_4616	Pocillopora_meandrina_HIv1___Sc0000017	7302129	7302556	428	191	52	0.015706806282722512	-	UCGUAGAACAUCGCAUUACGAGGACCGA	92	1	189	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7303252-7303777	Cluster_4617	Pocillopora_meandrina_HIv1___Sc0000017	7303252	7303777	526	6960	283	0.9744252873563218	+	UCUGUUUCCAUAUUUGAACGCUGACGAC	3247	34	6717	20	10	11	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7321863-7322291	Cluster_4618	Pocillopora_meandrina_HIv1___Sc0000017	7321863	7322291	429	425	66	0.9858823529411764	+	UGAAAGGACAUUUACAUUUGAGGAUGGAG	80	12	399	9	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7343995-7344418	Cluster_4619	Pocillopora_meandrina_HIv1___Sc0000017	7343995	7344418	424	118	36	1.0	+	UCUGUUUCCAUGUUUGAACGCUGACGAC	42	0	114	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7345784-7346209	Cluster_4620	Pocillopora_meandrina_HIv1___Sc0000017	7345784	7346209	426	123	63	0.0	-	UUUGAAAGGAUGCAUUAACGAUAGACGU	22	0	121	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7348006-7348429	Cluster_4621	Pocillopora_meandrina_HIv1___Sc0000017	7348006	7348429	424	117	31	0.0	-	UCUGUUUCCAUGUUUGAACGCUGACGAC	35	0	117	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7409563-7410021	Cluster_4622	Pocillopora_meandrina_HIv1___Sc0000017	7409563	7410021	459	271	118	0.996309963099631	+	CCGACAUGCCUGACUAUUUCAAACAAGC	38	14	235	10	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7410725-7411234	Cluster_4623	Pocillopora_meandrina_HIv1___Sc0000017	7410725	7411234	510	555	140	0.9657657657657658	+	CUGUGGCUCAUGUUAACCCUUUGUAACUG	60	4	543	1	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7416579-7417006	Cluster_4624	Pocillopora_meandrina_HIv1___Sc0000017	7416579	7417006	428	1675	44	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAA	1457	0	1635	0	0	0	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7448131-7448836	Cluster_4625	Pocillopora_meandrina_HIv1___Sc0000017	7448131	7448836	706	378	150	0.19576719576719576	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	73	1	346	0	1	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7508338-7508761	Cluster_4626	Pocillopora_meandrina_HIv1___Sc0000017	7508338	7508761	424	153	56	1.0	+	CCGACAUGCAUGACUAUUUCAAACAAGC	17	3	139	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7557760-7558187	Cluster_4627	Pocillopora_meandrina_HIv1___Sc0000017	7557760	7558187	428	274	42	0.9963503649635036	+	UCGUAGAACAUCGCAUUACGAGGACCGA	140	0	272	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7605253-7605798	Cluster_4628	Pocillopora_meandrina_HIv1___Sc0000017	7605253	7605798	546	270	97	0.9777777777777777	+	UGUACUGAUCUUUGUCUUCUGCAGCCAGA	40	1	267	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7607254-7607681	Cluster_4629	Pocillopora_meandrina_HIv1___Sc0000017	7607254	7607681	428	212	40	0.9905660377358491	+	UGGUAAACUUCCCUAACAUUGGCCUGUG	43	0	210	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7607940-7608368	Cluster_4630	Pocillopora_meandrina_HIv1___Sc0000017	7607940	7608368	429	101	24	0.9801980198019802	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	34	0	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7611048-7611606	Cluster_4631	Pocillopora_meandrina_HIv1___Sc0000017	7611048	7611606	559	445	100	0.45393258426966293	.	AUAGCUCGAACGAGGACUCGUCCUUAACA	77	8	385	1	1	8	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7629197-7629671	Cluster_4632	Pocillopora_meandrina_HIv1___Sc0000017	7629197	7629671	475	353	107	0.4192634560906516	.	UCUGUUUCCAUAUUUGAACACUGUCGAC	96	8	315	4	6	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7631065-7632147	Cluster_4633	Pocillopora_meandrina_HIv1___Sc0000017	7631065	7632147	1083	7653	242	0.0003920031360250882	-	UUUCCAUAUUUGAACGCUGACGACAGUAGG	5153	3	7645	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7632391-7632822	Cluster_4634	Pocillopora_meandrina_HIv1___Sc0000017	7632391	7632822	432	358	78	0.0	-	UGUUGAUUCUUUUCCAUUUAAUACAAU	46	0	351	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7635624-7636052	Cluster_4635	Pocillopora_meandrina_HIv1___Sc0000017	7635624	7636052	429	123	34	0.0	-	UCGGAUCUGAAAAAAACUGCGUUUGUUUUC	25	0	122	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7636103-7636532	Cluster_4636	Pocillopora_meandrina_HIv1___Sc0000017	7636103	7636532	430	159	71	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	40	0	155	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7636880-7637309	Cluster_4637	Pocillopora_meandrina_HIv1___Sc0000017	7636880	7637309	430	180	73	0.0	-	UGUACGCGUAUCUCUUGUUUAUCGAGCUUU	52	2	176	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7639204-7639914	Cluster_4638	Pocillopora_meandrina_HIv1___Sc0000017	7639204	7639914	711	450	125	0.0	-	UGUCAAAUCUUCAAUUGGUCUCUGUGCCGGA	85	5	434	8	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7640766-7641262	Cluster_4639	Pocillopora_meandrina_HIv1___Sc0000017	7640766	7641262	497	520	187	0.0	-	UGGGCAUCCAUCUAUAAAAGUGGGAAAGUU	65	2	505	6	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7707361-7707848	Cluster_4640	Pocillopora_meandrina_HIv1___Sc0000017	7707361	7707848	488	319	108	0.9905956112852664	+	UGACCCAAUAAGUGGACUUCCGUAUUCC	38	6	285	0	1	23	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7726736-7727160	Cluster_4641	Pocillopora_meandrina_HIv1___Sc0000017	7726736	7727160	425	165	61	0.0	-	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	19	1	152	3	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7809959-7810434	Cluster_4642	Pocillopora_meandrina_HIv1___Sc0000017	7809959	7810434	476	300	108	1.0	+	CCGACAUGCCUGACUAUUUCAAACAAGC	42	18	269	3	5	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7811088-7811592	Cluster_4643	Pocillopora_meandrina_HIv1___Sc0000017	7811088	7811592	505	1754	219	0.9612314709236032	+	UCGUAGAACAUCGCAUUACGAGGACCGA	817	6	1697	6	3	18	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7824092-7824816	Cluster_4644	Pocillopora_meandrina_HIv1___Sc0000017	7824092	7824816	725	5955	281	0.0	-	UUUCCAUAUUUGAACGCUGACGACAGUACGU	1480	4	5888	2	3	3	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7827790-7828215	Cluster_4645	Pocillopora_meandrina_HIv1___Sc0000017	7827790	7828215	426	81	28	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	37	0	80	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7839161-7839587	Cluster_4646	Pocillopora_meandrina_HIv1___Sc0000017	7839161	7839587	427	133	62	0.8045112781954887	+	UUUGAAAGGACAUUUACAUUUGAGGAUGGA	15	3	121	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7872587-7874191	Cluster_4647	Pocillopora_meandrina_HIv1___Sc0000017	7872587	7874191	1605	10422	845	0.0009595087315294569	-	UUUCCAUAUUUGAACGCUGACGACAGUAGG	5033	36	10292	14	8	57	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7876569-7876996	Cluster_4648	Pocillopora_meandrina_HIv1___Sc0000017	7876569	7876996	428	214	97	0.0	-	UAGUGUAUACCUGAAGAUCUAUUUUUAGC	16	3	207	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7877574-7877999	Cluster_4649	Pocillopora_meandrina_HIv1___Sc0000017	7877574	7877999	426	122	59	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	22	0	120	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7880962-7881390	Cluster_4650	Pocillopora_meandrina_HIv1___Sc0000017	7880962	7881390	429	154	46	0.006493506493506494	-	UAAAUCUUGCAUUGGAACCACUUGGCGCG	30	0	151	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7885544-7885972	Cluster_4651	Pocillopora_meandrina_HIv1___Sc0000017	7885544	7885972	429	232	118	0.004310344827586207	-	UGCUAAAUGUGUCUUCGUCGGUAUUACGU	17	3	226	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7910611-7911035	Cluster_4652	Pocillopora_meandrina_HIv1___Sc0000017	7910611	7911035	425	219	102	0.5251141552511416	.	CUGUGGCUCAUGUUAACCCUUUGUAACC	34	5	208	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7957991-7958415	Cluster_4653	Pocillopora_meandrina_HIv1___Sc0000017	7957991	7958415	425	181	62	1.0	+	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	23	5	167	2	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7971859-7972287	Cluster_4654	Pocillopora_meandrina_HIv1___Sc0000017	7971859	7972287	429	254	39	0.011811023622047244	-	UACGACGUGGUUCGGAGGCAGUGUGACCA	41	0	247	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7997759-7998191	Cluster_4655	Pocillopora_meandrina_HIv1___Sc0000017	7997759	7998191	433	403	64	1.0	+	UCUGUUUCUAUAUUUGAACGCUGACGAC	86	0	400	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8014781-8015205	Cluster_4656	Pocillopora_meandrina_HIv1___Sc0000017	8014781	8015205	425	181	67	0.011049723756906077	-	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	21	1	165	6	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8043563-8043996	Cluster_4657	Pocillopora_meandrina_HIv1___Sc0000017	8043563	8043996	434	628	63	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	250	0	616	0	0	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8073302-8076351	Cluster_4658	Pocillopora_meandrina_HIv1___Sc0000017	8073302	8076351	3050	74959	4320	0.04066222868501448	-	UGAUCAUGGAUUCUAAACUGGUAAUGGCC	24012	369	71393	282	263	1020	1632	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8086133-8086560	Cluster_4659	Pocillopora_meandrina_HIv1___Sc0000017	8086133	8086560	428	159	24	1.0	+	UCUGUUUCCAUAUUUGGACGCUGACGAC	91	0	154	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8099388-8100744	Cluster_4660	Pocillopora_meandrina_HIv1___Sc0000017	8099388	8100744	1357	2477	645	0.17723052079127977	-	UCGAUCAAUUGGCUUAUAUGAUUCUU	185	42	2026	22	14	142	231	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8106103-8106538	Cluster_4661	Pocillopora_meandrina_HIv1___Sc0000017	8106103	8106538	436	195	77	1.0	+	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	31	0	192	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8115360-8116284	Cluster_4662	Pocillopora_meandrina_HIv1___Sc0000017	8115360	8116284	925	13403	507	0.999925389838096	+	UUUCCAUAUUUGAACGCUGACGACAGUACA	2657	11	13193	4	4	14	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8161609-8162038	Cluster_4663	Pocillopora_meandrina_HIv1___Sc0000017	8161609	8162038	430	243	72	0.9794238683127572	+	UGACCCAAUAAGUGGACUUCCGUAUUCA	29	4	207	1	0	27	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8171890-8172377	Cluster_4664	Pocillopora_meandrina_HIv1___Sc0000017	8171890	8172377	488	56171	588	0.9999287888768226	+	UUUCCAUAUUUGAACGCUGACGACAGUACA	15596	16	55365	5	20	26	739	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8180900-8181326	Cluster_4665	Pocillopora_meandrina_HIv1___Sc0000017	8180900	8181326	427	156	59	0.0	-	CCGACAUGCAUGACUAUUUCAAACAAGC	16	3	145	4	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8209815-8210249	Cluster_4666	Pocillopora_meandrina_HIv1___Sc0000017	8209815	8210249	435	10806	306	0.0037016472330186935	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	4296	7	10493	4	10	13	279	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8261341-8261768	Cluster_4667	Pocillopora_meandrina_HIv1___Sc0000017	8261341	8261768	428	145	23	0.0	-	UCUGUUUCCAUAUUUGAACACUGUCGAC	98	0	135	0	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8261986-8262485	Cluster_4668	Pocillopora_meandrina_HIv1___Sc0000017	8261986	8262485	500	339	75	0.08259587020648967	-	UGUUGGAGACGGUCAUUUUCUGAAAGGA	77	5	322	0	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8265837-8266260	Cluster_4669	Pocillopora_meandrina_HIv1___Sc0000017	8265837	8266260	424	116	42	0.6206896551724138	.	UUUCCAUACUUGAACGCUGACGACAGUAGG	30	0	107	2	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8280142-8280613	Cluster_4670	Pocillopora_meandrina_HIv1___Sc0000017	8280142	8280613	472	581	140	0.25301204819277107	.	AUUGAUUCUAUUUUGUACGGCCUAGU	182	3	563	2	0	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8284831-8285251	Cluster_4671	Pocillopora_meandrina_HIv1___Sc0000017	8284831	8285251	421	75	31	0.9866666666666667	+	UGAAAGGACAUUUACAUUUGAGGAUGGAGG	13	3	66	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8285928-8286355	Cluster_4672	Pocillopora_meandrina_HIv1___Sc0000017	8285928	8286355	428	121	30	0.9834710743801653	+	UCGUAGAACAUCGCAUUACGAGGACCGA	70	0	117	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8345457-8345881	Cluster_4673	Pocillopora_meandrina_HIv1___Sc0000017	8345457	8345881	425	173	68	0.9942196531791907	+	CCGACAUGCAUGACUAUUUCAAACAAGC	21	3	161	4	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8355848-8356270	Cluster_4674	Pocillopora_meandrina_HIv1___Sc0000017	8355848	8356270	423	273	142	0.9816849816849816	+	UGUAACAGCUCUUGUGUCUUCAGGCCUCGA	23	2	262	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8356873-8357301	Cluster_4675	Pocillopora_meandrina_HIv1___Sc0000017	8356873	8357301	429	1441	129	0.9909784871616932	+	UCUUUCGGUUCUUUGGUGAGGUCGCCAUC	691	11	1424	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8359861-8360291	Cluster_4676	Pocillopora_meandrina_HIv1___Sc0000017	8359861	8360291	431	232	123	0.9353448275862069	+	UCCCGAUCGCGAAUAUCGAACCGUCGAUAUG	28	0	210	0	3	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8360425-8360839	Cluster_4677	Pocillopora_meandrina_HIv1___Sc0000017	8360425	8360839	415	153	84	0.8562091503267973	+	UGCGUGUUUUCUAAGUGUCGCUGAUGUG	12	3	133	1	5	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8361688-8362276	Cluster_4678	Pocillopora_meandrina_HIv1___Sc0000017	8361688	8362276	589	53398	1124	0.00013109105209932955	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	22260	68	52932	14	33	196	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8411027-8411454	Cluster_4679	Pocillopora_meandrina_HIv1___Sc0000017	8411027	8411454	428	260	52	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	118	0	258	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8418421-8418858	Cluster_4680	Pocillopora_meandrina_HIv1___Sc0000017	8418421	8418858	438	223	93	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	34	0	218	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8424318-8425401	Cluster_4681	Pocillopora_meandrina_HIv1___Sc0000017	8424318	8425401	1084	3120	502	0.9483974358974359	+	UCGAUCAAUUGGCUUAUAUGAUUCUU	460	13	2964	6	9	28	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8426126-8426538	Cluster_4682	Pocillopora_meandrina_HIv1___Sc0000017	8426126	8426538	413	126	60	0.1349206349206349	-	UGCAUUGGAACCACUUGGCGCGAUCUCAUC	17	2	118	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8437082-8437511	Cluster_4683	Pocillopora_meandrina_HIv1___Sc0000017	8437082	8437511	430	1298	140	0.05084745762711865	-	UGUGAUUGCAUGGCUGGUCUUGGAGAGAGC	395	26	1068	47	14	58	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8437546-8437955	Cluster_4684	Pocillopora_meandrina_HIv1___Sc0000017	8437546	8437955	410	120	63	0.625	.	UAAAGUCUAUCGAAGGACAAGAUCCGUA	9	0	117	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8439842-8440269	Cluster_4685	Pocillopora_meandrina_HIv1___Sc0000017	8439842	8440269	428	176	29	0.0	-	UCUGUUUCCAUAUUUGGACGCUGACGAC	103	0	174	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8450021-8450534	Cluster_4686	Pocillopora_meandrina_HIv1___Sc0000017	8450021	8450534	514	10313	571	0.852322311645496	+	UACGAUCACGUCCGCCAUUAUCACUGAC	2743	46	9285	38	29	347	568	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8458469-8458895	Cluster_4687	Pocillopora_meandrina_HIv1___Sc0000017	8458469	8458895	427	124	38	0.11290322580645161	-	UCUGUUUCCAUAUUUGAACACUGACGAC	31	10	105	5	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8472664-8473134	Cluster_4688	Pocillopora_meandrina_HIv1___Sc0000017	8472664	8473134	471	283	109	0.9964664310954063	+	CCGACAUGCCUGACUAUUUCAAACAAGC	36	10	247	11	3	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8478790-8479217	Cluster_4689	Pocillopora_meandrina_HIv1___Sc0000017	8478790	8479217	428	1668	57	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAA	1399	0	1613	0	1	1	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8485860-8486289	Cluster_4690	Pocillopora_meandrina_HIv1___Sc0000017	8485860	8486289	430	109	24	0.0	-	UGGACUUCCGUAUUCCUCUAGAAUAAGAUA	75	0	109	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8491348-8491803	Cluster_4691	Pocillopora_meandrina_HIv1___Sc0000017	8491348	8491803	456	571	152	0.005253940455341506	-	UCUUCAAUUGGUCUCUGUGCCGGACUGA	68	6	463	21	3	8	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8521175-8521606	Cluster_4692	Pocillopora_meandrina_HIv1___Sc0000017	8521175	8521606	432	405	62	1.0	+	UCUGUUUCUAUAUUUGAACGCUGACGAC	96	0	401	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8533693-8534118	Cluster_4693	Pocillopora_meandrina_HIv1___Sc0000017	8533693	8534118	426	180	59	0.005555555555555556	-	CCGACAUGCAUGACUAUUUCAAACAAGC	21	4	167	3	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8579114-8579615	Cluster_4694	Pocillopora_meandrina_HIv1___Sc0000017	8579114	8579615	502	361	119	0.21329639889196675	.	UGUACUGUUUGUAUUUUUUUUCCUGGG	44	3	312	5	11	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8589297-8589726	Cluster_4695	Pocillopora_meandrina_HIv1___Sc0000017	8589297	8589726	430	375	90	0.9306666666666666	+	UGUUGGAGACGGUCAUUUUCUGAAAGGA	125	0	364	3	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8600200-8600947	Cluster_4696	Pocillopora_meandrina_HIv1___Sc0000017	8600200	8600947	748	497	254	0.8169014084507042	+	UGUAAACUUGAGAGUCGUCAGCGUAACA	18	2	452	2	7	13	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8602145-8602976	Cluster_4697	Pocillopora_meandrina_HIv1___Sc0000017	8602145	8602976	832	574	256	0.05400696864111498	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	63	6	549	0	1	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8614396-8614831	Cluster_4698	Pocillopora_meandrina_HIv1___Sc0000017	8614396	8614831	436	13467	407	0.9988119105962724	+	UCUGUUUCCAUAUUUGAACGCUGACGAU	4278	128	12784	23	138	103	291	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8622621-8623331	Cluster_4699	Pocillopora_meandrina_HIv1___Sc0000017	8622621	8623331	711	963	278	0.9989615784008308	+	UUCGAUCGAUCAGCUGAGCUUUCUAUAGUU	84	3	928	18	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8623502-8623931	Cluster_4700	Pocillopora_meandrina_HIv1___Sc0000017	8623502	8623931	430	280	124	1.0	+	UACUUUUAAUCUCUUGUAUACCCUCUUG	21	3	272	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8626004-8626575	Cluster_4701	Pocillopora_meandrina_HIv1___Sc0000017	8626004	8626575	572	368	170	1.0	+	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	41	3	357	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8629991-8631496	Cluster_4702	Pocillopora_meandrina_HIv1___Sc0000017	8629991	8631496	1506	15283	1203	0.9879604789635543	+	UUUCCAUAUUUGAACGCUGACGACAGUAGG	3539	216	14863	14	31	132	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8631646-8632067	Cluster_4703	Pocillopora_meandrina_HIv1___Sc0000017	8631646	8632067	422	137	68	1.0	+	UCCUUCACCUUCGAUCUCAAAGUAAUGUUC	13	0	136	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8636006-8636685	Cluster_4704	Pocillopora_meandrina_HIv1___Sc0000017	8636006	8636685	680	657	262	0.8599695585996956	+	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	40	12	595	9	2	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8642086-8642602	Cluster_4705	Pocillopora_meandrina_HIv1___Sc0000017	8642086	8642602	517	1908	302	0.9156184486373166	+	UACGACGUGGUUCUGAGGCAGCGUGACC	139	11	1835	4	6	18	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8642732-8643702	Cluster_4706	Pocillopora_meandrina_HIv1___Sc0000017	8642732	8643702	971	1029	326	0.5170068027210885	.	UCUGUUUCCAUAUUUGAACACUGUCGAC	110	9	958	10	15	14	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8660633-8661065	Cluster_4707	Pocillopora_meandrina_HIv1___Sc0000017	8660633	8661065	433	579	139	0.9585492227979274	+	UUUACAACGUCCGGCUUGACCAUUUACA	60	3	543	3	8	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8715732-8716380	Cluster_4708	Pocillopora_meandrina_HIv1___Sc0000017	8715732	8716380	649	504	221	0.9345238095238095	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	36	15	451	7	7	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8855629-8856058	Cluster_4709	Pocillopora_meandrina_HIv1___Sc0000017	8855629	8856058	430	200	28	1.0	+	UUGAUCCAUGUUAUGACUAUCCGACUGACA	42	2	194	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8903791-8904209	Cluster_4710	Pocillopora_meandrina_HIv1___Sc0000017	8903791	8904209	419	89	26	1.0	+	GCCUUGUAGAAUUCUUUGUAGG	14	39	13	7	16	12	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8971228-8971653	Cluster_4711	Pocillopora_meandrina_HIv1___Sc0000017	8971228	8971653	426	145	46	0.0	-	CACUUCCUGAUUUUAACCACAACUGUGUGGU	37	10	118	1	6	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8976789-8977215	Cluster_4712	Pocillopora_meandrina_HIv1___Sc0000017	8976789	8977215	427	82	27	0.012195121951219513	-	UAAUCGUUGGCUUUUUCUCGAGGCGUG	35	1	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9006631-9007117	Cluster_4713	Pocillopora_meandrina_HIv1___Sc0000017	9006631	9007117	487	471	199	0.9426751592356688	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	17	33	316	11	8	35	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9062627-9063081	Cluster_4714	Pocillopora_meandrina_HIv1___Sc0000017	9062627	9063081	455	11127	387	0.9997303855486654	+	GCGUUGGUGGUAUAGUGGUGAGCAUAGCU	3913	386	10518	24	42	104	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9090044-9090720	Cluster_4715	Pocillopora_meandrina_HIv1___Sc0000017	9090044	9090720	677	8342	536	0.003356509230400384	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2282	12	8209	2	43	36	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9090774-9092654	Cluster_4716	Pocillopora_meandrina_HIv1___Sc0000017	9090774	9092654	1881	9429	2406	0.06808781419026408	-	UGAUAGACUGCACGACGAUUUACGUCA	509	92	8608	68	81	253	327	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9151739-9152167	Cluster_4717	Pocillopora_meandrina_HIv1___Sc0000017	9151739	9152167	429	260	57	0.9884615384615385	+	AAGGAGUUAACGACAAGUUGAAGGCGAAG	81	4	229	9	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9244465-9244894	Cluster_4718	Pocillopora_meandrina_HIv1___Sc0000017	9244465	9244894	430	247	92	0.9838056680161943	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	69	1	243	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:125517-125940	Cluster_4719	Pocillopora_meandrina_HIv1___Sc0000018	125517	125940	424	9420	147	0.0005307855626326964	-	UCUGACGAAGGGCUGACACUCA	5827	191	13	2729	6285	128	74	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:167340-167768	Cluster_4720	Pocillopora_meandrina_HIv1___Sc0000018	167340	167768	429	85	30	0.9529411764705882	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	0	84	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:177198-177766	Cluster_4721	Pocillopora_meandrina_HIv1___Sc0000018	177198	177766	569	387	89	0.0	-	CAACAAUGGACAUAAAAGAAUACAAUGCGUG	101	8	371	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:204995-205696	Cluster_4722	Pocillopora_meandrina_HIv1___Sc0000018	204995	205696	702	252	128	0.9325396825396826	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	29	3	243	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:206926-207355	Cluster_4723	Pocillopora_meandrina_HIv1___Sc0000018	206926	207355	430	265	136	0.8641509433962264	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	32	1	241	0	1	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:218817-219711	Cluster_4724	Pocillopora_meandrina_HIv1___Sc0000018	218817	219711	895	841	325	0.7562425683709869	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	150	10	733	4	12	22	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:246943-247783	Cluster_4725	Pocillopora_meandrina_HIv1___Sc0000018	246943	247783	841	835	137	0.004790419161676647	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	184	3	762	0	67	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:255355-256079	Cluster_4726	Pocillopora_meandrina_HIv1___Sc0000018	255355	256079	725	1141	292	0.04820333041191937	-	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	71	14	1034	2	13	16	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:267369-267831	Cluster_4727	Pocillopora_meandrina_HIv1___Sc0000018	267369	267831	463	1142	172	0.046409807355516634	-	UAUUCACACGUGUUAUCUCGUCGCUCG	140	1	1086	2	0	6	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:269536-270067	Cluster_4728	Pocillopora_meandrina_HIv1___Sc0000018	269536	270067	532	2101	258	0.4821513564969062	.	UUCUAGCUCGACUUCACGCU	273	999	207	338	453	99	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:290221-290739	Cluster_4729	Pocillopora_meandrina_HIv1___Sc0000018	290221	290739	519	495	129	0.00202020202020202	-	AGAUUACUCAUGCGGCCUUUUGGAUAAGA	82	1	478	6	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:303788-304217	Cluster_4730	Pocillopora_meandrina_HIv1___Sc0000018	303788	304217	430	995	65	0.0	-	GAAAUUCGGAGUGGCUGCUUAUUUCAUAGC	624	1	990	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:317636-318339	Cluster_4731	Pocillopora_meandrina_HIv1___Sc0000018	317636	318339	704	285	140	0.9649122807017544	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	29	1	275	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:319566-319998	Cluster_4732	Pocillopora_meandrina_HIv1___Sc0000018	319566	319998	433	248	139	0.8145161290322581	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	27	2	222	1	0	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:396275-396705	Cluster_4733	Pocillopora_meandrina_HIv1___Sc0000018	396275	396705	431	4363	148	0.0009168003667201467	-	UGAUGAACUAGAGAACCAGUGCU	1169	7	901	5	32	3077	341	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:454437-454859	Cluster_4734	Pocillopora_meandrina_HIv1___Sc0000018	454437	454859	423	152	73	0.8486842105263158	+	UACCGUGAGACUGAAGAACACAACUAUAUG	14	26	88	10	4	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:456707-457148	Cluster_4735	Pocillopora_meandrina_HIv1___Sc0000018	456707	457148	442	412	40	0.7888349514563107	.	AUCAGCAAGAAAAGCAGGUGCC	161	9	211	0	163	8	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:467842-468271	Cluster_4736	Pocillopora_meandrina_HIv1___Sc0000018	467842	468271	430	216	38	1.0	+	GUGAGUCUGAUACAUCUUGCCGCACAUGGA	115	0	168	0	1	5	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:781035-781472	Cluster_4737	Pocillopora_meandrina_HIv1___Sc0000018	781035	781472	438	254	80	0.011811023622047244	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	45	1	253	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:784362-784786	Cluster_4738	Pocillopora_meandrina_HIv1___Sc0000018	784362	784786	425	119	48	0.9663865546218487	+	UGAUUGCAGAGCACAGCAUUGCCACC	12	1	111	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:1177769-1178195	Cluster_4739	Pocillopora_meandrina_HIv1___Sc0000018	1177769	1178195	427	171	65	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	20	2	166	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2098006-2098514	Cluster_4740	Pocillopora_meandrina_HIv1___Sc0000018	2098006	2098514	509	6706	1037	1.0	+	GCUAGUGAUGACAAAAAGAUGACGAGCCUGA	410	1151	3056	661	657	542	639	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2098964-2099437	Cluster_4741	Pocillopora_meandrina_HIv1___Sc0000018	2098964	2099437	474	12215	899	1.0	+	AUAGAAUGAUGAUGCUUUAGACUAGAGU	1996	1470	7596	542	376	1593	638	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2099479-2099957	Cluster_4742	Pocillopora_meandrina_HIv1___Sc0000018	2099479	2099957	479	4262	422	1.0	+	AUAUCUGAUGAAAACCCCUUUCUGACA	453	549	3221	184	130	126	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2100300-2101798	Cluster_4743	Pocillopora_meandrina_HIv1___Sc0000018	2100300	2101798	1499	8423	1401	0.9998812774545887	+	GAUAAGUCACGUCAGUCUGAUU	570	2698	2405	730	1395	649	546	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2102107-2102876	Cluster_4744	Pocillopora_meandrina_HIv1___Sc0000018	2102107	2102876	770	5601	731	1.0	+	GUGGAAUGAUGUAAAAACUU	713	2691	953	606	387	470	494	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2328246-2328664	Cluster_4745	Pocillopora_meandrina_HIv1___Sc0000018	2328246	2328664	419	269	4	1.0	+	GGUGUGUGAUGACUGAAA	136	269	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2367661-2368075	Cluster_4746	Pocillopora_meandrina_HIv1___Sc0000018	2367661	2368075	415	254	158	0.0	-	CUGACUUGAGGAAAUUGCCAUGAUA	17	76	98	20	15	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2443249-2443678	Cluster_4747	Pocillopora_meandrina_HIv1___Sc0000018	2443249	2443678	430	307	163	0.009771986970684038	-	CAGUGGAAGCGUGCUGGGCCCAUAACCCA	16	130	108	23	23	15	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2462000-2462480	Cluster_4748	Pocillopora_meandrina_HIv1___Sc0000018	2462000	2462480	481	412	128	1.0	+	AGCAGAUGAUGAUUAUGACC	26	100	144	52	48	36	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2542902-2544877	Cluster_4749	Pocillopora_meandrina_HIv1___Sc0000018	2542902	2544877	1976	5502	1422	0.06579425663395129	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	455	28	5252	13	31	65	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2582233-2582685	Cluster_4750	Pocillopora_meandrina_HIv1___Sc0000018	2582233	2582685	453	6189	164	0.00016157699143641945	-	UUUAUUCUGAUAUCAGGGUCACCACCCUAG	1715	36	5211	153	56	685	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2693273-2693701	Cluster_4751	Pocillopora_meandrina_HIv1___Sc0000018	2693273	2693701	429	115	43	1.0	+	UGAGAUCGUGAUGAAAAUUAUUGCUGGAUU	39	8	96	7	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2797804-2798222	Cluster_4752	Pocillopora_meandrina_HIv1___Sc0000018	2797804	2798222	419	896	38	0.9988839285714286	+	UGCCCGGGUCCUCCACCA	556	895	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2808567-2808973	Cluster_4753	Pocillopora_meandrina_HIv1___Sc0000018	2808567	2808973	407	136	82	0.1323529411764706	-	UCAUUAACGUAAACACUGAAAAGCAGGGGU	11	0	126	0	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2886488-2886905	Cluster_4754	Pocillopora_meandrina_HIv1___Sc0000018	2886488	2886905	418	76	1	0.0	-	UUGAACUCGACCCUGUCG	76	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3029533-3029960	Cluster_4755	Pocillopora_meandrina_HIv1___Sc0000018	3029533	3029960	428	115	26	0.8521739130434782	+	AUUGAAGAUAUUUCAGCGGCUGAGUUGA	76	2	107	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3274720-3275230	Cluster_4756	Pocillopora_meandrina_HIv1___Sc0000018	3274720	3275230	511	211	124	0.004739336492890996	-	AAUUGAAGUGGAAUAAAAGCA	18	45	61	40	26	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3276308-3276721	Cluster_4757	Pocillopora_meandrina_HIv1___Sc0000018	3276308	3276721	414	214	148	0.0	-	CGGUUUGGCGAUCUCUGU	7	57	104	15	8	8	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3348228-3348658	Cluster_4758	Pocillopora_meandrina_HIv1___Sc0000018	3348228	3348658	431	1158	73	0.9835924006908463	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	295	4	1144	0	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3520326-3520879	Cluster_4759	Pocillopora_meandrina_HIv1___Sc0000018	3520326	3520879	554	2084	163	0.977447216890595	+	UCGUAUUCUUUUCCAUCCUCGCCGAACAGA	640	4	2039	2	7	8	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3750631-3751057	Cluster_4760	Pocillopora_meandrina_HIv1___Sc0000018	3750631	3751057	427	198	112	0.8686868686868687	+	UGAGUCGAGGUUAUUCACAAUACGAGC	35	5	168	0	3	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3869724-3870153	Cluster_4761	Pocillopora_meandrina_HIv1___Sc0000018	3869724	3870153	430	252	48	0.0	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	91	1	250	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4194708-4195136	Cluster_4762	Pocillopora_meandrina_HIv1___Sc0000018	4194708	4195136	429	235	7	0.9957446808510638	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	206	0	235	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4337764-4338188	Cluster_4763	Pocillopora_meandrina_HIv1___Sc0000018	4337764	4338188	425	631	98	1.0	+	UAGAUCAAGUGUGGUUACUUUAAU	108	53	54	84	116	156	168	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4414758-4415184	Cluster_4764	Pocillopora_meandrina_HIv1___Sc0000018	4414758	4415184	427	211	48	0.004739336492890996	-	CGCGUUUCGAUCGUCAACGUAGGGGAGG	40	1	207	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4484034-4484453	Cluster_4765	Pocillopora_meandrina_HIv1___Sc0000018	4484034	4484453	420	404	29	0.9900990099009901	+	CGGCCUGAAAAAAAAAAA	190	363	1	23	14	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4508023-4508579	Cluster_4766	Pocillopora_meandrina_HIv1___Sc0000018	4508023	4508579	557	5702	556	0.0007015082427218519	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1226	6	5661	2	6	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4508612-4510664	Cluster_4767	Pocillopora_meandrina_HIv1___Sc0000018	4508612	4510664	2053	3219	1370	0.02019260639950295	-	UGCUUUCUGUUCUCUUGUUCUCCAACAAA	78	11	3070	13	20	26	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4564884-4564976	Cluster_4768	Pocillopora_meandrina_HIv1___Sc0000018	4564884	4564976	93	530	60	1.0	+	UAACCUUAUUUGUCUUCACAUGU	143	35	0	42	119	278	56	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000018:4621884-4622308	Cluster_4769	Pocillopora_meandrina_HIv1___Sc0000018	4621884	4622308	425	107	37	0.9532710280373832	+	UGUUGUAUCAAGCGAAAACCGAGAGA	17	2	98	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4692501-4692940	Cluster_4770	Pocillopora_meandrina_HIv1___Sc0000018	4692501	4692940	440	246	127	0.0040650406504065045	-	GCAGUCAUUGUGGCAAGUGUGUAAUAUCU	12	34	142	25	24	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4839414-4839828	Cluster_4771	Pocillopora_meandrina_HIv1___Sc0000018	4839414	4839828	415	190	126	1.0	+	AAUUACUCGAGAUCUUGGAACA	12	46	60	10	27	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4870095-4870517	Cluster_4772	Pocillopora_meandrina_HIv1___Sc0000018	4870095	4870517	423	173	89	0.0	-	GGUCAAGGAUGAUAAUCUCU	12	47	51	31	15	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4873669-4874121	Cluster_4773	Pocillopora_meandrina_HIv1___Sc0000018	4873669	4874121	453	917	51	0.9978189749182116	+	UGGUAGAACCAACUUCGUGUCGA	494	19	8	0	98	772	20	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4889391-4889792	Cluster_4774	Pocillopora_meandrina_HIv1___Sc0000018	4889391	4889792	402	133	92	1.0	+	CUGCACUUAGUUGAACCUUCGACU	6	25	62	11	7	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4969282-4969712	Cluster_4775	Pocillopora_meandrina_HIv1___Sc0000018	4969282	4969712	431	172	59	1.0	+	AAACCGAUACUUCUACCGUUCAACCUGAGA	20	23	112	1	15	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5069169-5069647	Cluster_4776	Pocillopora_meandrina_HIv1___Sc0000018	5069169	5069647	479	236	136	1.0	+	CCAAAUGGCGGAUGCAGAACC	8	92	62	30	24	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5070502-5070916	Cluster_4777	Pocillopora_meandrina_HIv1___Sc0000018	5070502	5070916	415	108	74	1.0	+	CGCUUGGUCAAGGACAUGAAGAUCA	4	27	52	7	8	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5071007-5071618	Cluster_4778	Pocillopora_meandrina_HIv1___Sc0000018	5071007	5071618	612	525	304	0.9980952380952381	+	GUACGUCGUGGCUACUGGGGUAACA	41	106	260	36	38	44	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5072028-5072445	Cluster_4779	Pocillopora_meandrina_HIv1___Sc0000018	5072028	5072445	418	269	195	1.0	+	AGGGGAACUGGUAUUGUGUCU	5	81	113	24	23	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5072563-5073052	Cluster_4780	Pocillopora_meandrina_HIv1___Sc0000018	5072563	5073052	490	322	224	1.0	+	CCUGGCAAAGAAUCACUCAGGACAGAGAGCU	8	94	135	28	19	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5104121-5105290	Cluster_4781	Pocillopora_meandrina_HIv1___Sc0000018	5104121	5105290	1170	1847	362	0.23551705468327017	.	UCAACGCUUAGCAGACUGGUUUAGUGAUC	230	11	1664	3	9	32	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5127916-5128341	Cluster_4782	Pocillopora_meandrina_HIv1___Sc0000018	5127916	5128341	426	155	27	0.9870967741935484	+	AGUGAUUGAAAAAAAAAAAAAAAAA	24	1	122	4	3	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5153901-5154329	Cluster_4783	Pocillopora_meandrina_HIv1___Sc0000018	5153901	5154329	429	84	20	0.0	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	56	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5399535-5399962	Cluster_4784	Pocillopora_meandrina_HIv1___Sc0000018	5399535	5399962	428	125	30	0.0	-	AACUACUGCUCGUACUCUAGAUGACAAU	24	0	125	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5914045-5914458	Cluster_4785	Pocillopora_meandrina_HIv1___Sc0000018	5914045	5914458	414	95	59	0.37894736842105264	.	UAGCACGACGUUUGGAAUAGG	6	53	6	16	7	13	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5932011-5932790	Cluster_4786	Pocillopora_meandrina_HIv1___Sc0000018	5932011	5932790	780	851	358	0.3783783783783784	.	UGUAUUCACUUGGGUUAACUCUUCCACA	104	22	729	6	9	17	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5933123-5933526	Cluster_4787	Pocillopora_meandrina_HIv1___Sc0000018	5933123	5933526	404	189	119	0.17989417989417988	-	UACUUCUAACAGCGUUUCUUUUAGCUCU	11	4	163	2	2	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5934317-5934745	Cluster_4788	Pocillopora_meandrina_HIv1___Sc0000018	5934317	5934745	429	455	128	0.03296703296703297	-	UGUAGAAUCAAUCUGUUACUAAGACACC	102	2	435	4	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5946594-5947633	Cluster_4789	Pocillopora_meandrina_HIv1___Sc0000018	5946594	5947633	1040	4473	774	0.025039123630672927	-	UGUACUGGUUCUUCAAAUGCUUAACUUUGC	763	23	4309	8	8	55	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5962547-5963375	Cluster_4790	Pocillopora_meandrina_HIv1___Sc0000018	5962547	5963375	829	1985	592	0.36523929471032746	.	UGUAUCUGGUUUUUCUGUCUUGAACAAUG	282	35	1610	32	21	181	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5979022-5979452	Cluster_4791	Pocillopora_meandrina_HIv1___Sc0000018	5979022	5979452	431	1478	89	0.0	-	UUCCAGAACAGAGAACCUCUCCCGAUGACC	613	16	1452	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5985449-5986116	Cluster_4792	Pocillopora_meandrina_HIv1___Sc0000018	5985449	5986116	668	926	162	0.0	-	UCUGGUACUUGGACGAUCAACAUGCC	183	6	907	0	0	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5987227-5987656	Cluster_4793	Pocillopora_meandrina_HIv1___Sc0000018	5987227	5987656	430	198	19	0.0	-	UACGAAACUCAUGAUGACAAACAACAAAUG	115	0	197	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5988897-5989562	Cluster_4794	Pocillopora_meandrina_HIv1___Sc0000018	5988897	5989562	666	266	116	0.018796992481203006	-	UCUCUGCUCCUUGAACUGAUAUUAUGAAGC	30	4	245	4	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5990535-5990941	Cluster_4795	Pocillopora_meandrina_HIv1___Sc0000018	5990535	5990941	407	168	78	0.27976190476190477	.	UGACAACAUCAAAAUUUUUAACUGGGC	14	1	157	0	2	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5992569-5993138	Cluster_4796	Pocillopora_meandrina_HIv1___Sc0000018	5992569	5993138	570	1740	266	0.006896551724137931	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	341	3	1708	2	3	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6015912-6016348	Cluster_4797	Pocillopora_meandrina_HIv1___Sc0000018	6015912	6016348	437	819	139	0.002442002442002442	-	UGAUUUAUUCCACUCUGAUAUCGUACAG	328	0	808	2	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6018265-6018691	Cluster_4798	Pocillopora_meandrina_HIv1___Sc0000018	6018265	6018691	427	258	144	0.06589147286821706	-	UGACUUCGUAUCGGUCUUCGCUCCAUGCA	15	5	237	1	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6023501-6023925	Cluster_4799	Pocillopora_meandrina_HIv1___Sc0000018	6023501	6023925	425	124	12	0.967741935483871	+	GUGAAGACGAUUAAGUUGACUGGGG	59	0	108	0	0	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6024504-6024931	Cluster_4800	Pocillopora_meandrina_HIv1___Sc0000018	6024504	6024931	428	220	65	0.08636363636363636	-	UGAUGUCUGCUACUUCCUCUUUUUCAGG	41	3	204	0	3	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6024977-6025753	Cluster_4801	Pocillopora_meandrina_HIv1___Sc0000018	6024977	6025753	777	1214	371	0.37067545304777594	.	ACAUGACUUAUCUCCAGAAGAAUUUGAGG	96	13	1091	6	41	15	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6026053-6026481	Cluster_4802	Pocillopora_meandrina_HIv1___Sc0000018	6026053	6026481	429	212	111	0.12264150943396226	-	UCAUCUUUAGUAAAACUGAAAACGUUGUGGA	14	2	197	2	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6041457-6042847	Cluster_4803	Pocillopora_meandrina_HIv1___Sc0000018	6041457	6042847	1391	2901	663	0.11616683902102723	-	UUUCAAAUGCUUUUGUAGAUCAUCUCCAAA	505	21	2796	7	8	35	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6044345-6045583	Cluster_4804	Pocillopora_meandrina_HIv1___Sc0000018	6044345	6045583	1239	641	269	0.08892355694227769	-	UUCUGAAGUACUUUCCCAAUAACAUUGAAA	47	4	580	4	8	29	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6049515-6049986	Cluster_4805	Pocillopora_meandrina_HIv1___Sc0000018	6049515	6049986	472	298	92	0.0	-	UGAUCUGCUCGAACGUGACUUAGCACUAC	30	2	285	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6052010-6052435	Cluster_4806	Pocillopora_meandrina_HIv1___Sc0000018	6052010	6052435	426	101	42	0.0	-	UGACAGUGCGUGAUCUUCUCUUGAUGUU	22	2	93	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6052990-6053419	Cluster_4807	Pocillopora_meandrina_HIv1___Sc0000018	6052990	6053419	430	237	97	0.0	-	UCUAGUUAACGGUUUGUCUUUGAGAACGAC	37	2	230	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6054042-6054708	Cluster_4808	Pocillopora_meandrina_HIv1___Sc0000018	6054042	6054708	667	291	100	0.0	-	UUGGACUGUGCAGCCUUAAUCAGGAACAAC	88	19	213	47	6	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6055726-6056149	Cluster_4809	Pocillopora_meandrina_HIv1___Sc0000018	6055726	6056149	424	83	36	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	20	0	82	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6060238-6060667	Cluster_4810	Pocillopora_meandrina_HIv1___Sc0000018	6060238	6060667	430	206	73	0.0	-	UUCACGUGCUUGACUCUUUCACCCCAGAUA	26	5	199	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6060669-6061195	Cluster_4811	Pocillopora_meandrina_HIv1___Sc0000018	6060669	6061195	527	345	117	0.0	-	UUGGAACAAUCUUUAAGGUCCUGACGCUG	74	10	317	4	5	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6061223-6061651	Cluster_4812	Pocillopora_meandrina_HIv1___Sc0000018	6061223	6061651	429	122	34	0.0	-	UUGAUUUCUGCUUCAAGGGACUGUUGUGG	50	0	122	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6066390-6066818	Cluster_4813	Pocillopora_meandrina_HIv1___Sc0000018	6066390	6066818	429	177	71	0.01694915254237288	-	UGUUUGUCGAUUAGGCUGAGAAAUUUGUGU	12	25	143	4	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6067322-6067752	Cluster_4814	Pocillopora_meandrina_HIv1___Sc0000018	6067322	6067752	431	1369	118	0.0029218407596785976	-	UGACUCAACUUUACGUAACUUAUGGCUUU	252	6	1307	0	2	9	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6068424-6068852	Cluster_4815	Pocillopora_meandrina_HIv1___Sc0000018	6068424	6068852	429	137	54	0.058394160583941604	-	CAGGUAUAGGUUACUCAAGAUUAAUUGAU	37	3	122	2	7	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6073845-6074443	Cluster_4816	Pocillopora_meandrina_HIv1___Sc0000018	6073845	6074443	599	350	135	0.0	-	UAGGACAGUACAUGGUGUAGCUACCAUCAUC	43	6	339	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6075187-6075821	Cluster_4817	Pocillopora_meandrina_HIv1___Sc0000018	6075187	6075821	635	398	128	0.0	-	UGCGAACUCCAAACUUUCUGUAUCCACAGC	45	2	389	0	4	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6083879-6084308	Cluster_4818	Pocillopora_meandrina_HIv1___Sc0000018	6083879	6084308	430	386	73	0.015544041450777202	-	UAUGACGGUACUUUCAAUGGCUUCAGGC	134	6	355	1	11	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6085166-6085593	Cluster_4819	Pocillopora_meandrina_HIv1___Sc0000018	6085166	6085593	428	208	87	0.014423076923076924	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	20	2	197	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6086451-6088566	Cluster_4820	Pocillopora_meandrina_HIv1___Sc0000018	6086451	6088566	2116	21255	3702	0.018725005880969182	-	UGUGAUCUUGUAGAGUUUCAGAAAAUGA	1664	114	20582	57	65	206	231	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6090996-6091424	Cluster_4821	Pocillopora_meandrina_HIv1___Sc0000018	6090996	6091424	429	293	121	0.017064846416382253	-	CUGUUGCUGAAUUCGAUACCCAUUUUCGG	21	4	284	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6092880-6093306	Cluster_4822	Pocillopora_meandrina_HIv1___Sc0000018	6092880	6093306	427	231	101	0.025974025974025976	-	UUGGCUGUGCUUUGCUGAAUCUUGUCC	17	3	220	2	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6098946-6099537	Cluster_4823	Pocillopora_meandrina_HIv1___Sc0000018	6098946	6099537	592	252	115	0.0	-	UCCUCGAUCUCGUUUUGAAUAGUUUCAAC	24	2	248	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6100824-6101236	Cluster_4824	Pocillopora_meandrina_HIv1___Sc0000018	6100824	6101236	413	189	100	0.0	-	UGGCAGUAGAAUGGGGUUCCUCGAGUUC	8	2	180	1	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6103919-6104805	Cluster_4825	Pocillopora_meandrina_HIv1___Sc0000018	6103919	6104805	887	2051	333	0.046318868844466114	-	AUCCCACUCCUGACACCA	638	960	1027	9	4	13	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6108755-6109178	Cluster_4826	Pocillopora_meandrina_HIv1___Sc0000018	6108755	6109178	424	98	23	0.02040816326530612	-	UAACCCGAGAACUGACACGUGAGUAGUC	58	1	89	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6110872-6111291	Cluster_4827	Pocillopora_meandrina_HIv1___Sc0000018	6110872	6111291	420	187	79	0.0	-	UCUUUAAUCUUGUGUAGUACUCCUAUCAGU	22	1	182	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6111313-6111742	Cluster_4828	Pocillopora_meandrina_HIv1___Sc0000018	6111313	6111742	430	239	104	0.0	-	UGACUCUUGGUAAUCUGAACUGAUCUC	21	6	228	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6112787-6113215	Cluster_4829	Pocillopora_meandrina_HIv1___Sc0000018	6112787	6113215	429	136	36	0.0	-	AUCCUGUACAAUUCUGUAUAUCAGACCAUG	39	2	125	0	5	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6123151-6123564	Cluster_4830	Pocillopora_meandrina_HIv1___Sc0000018	6123151	6123564	414	172	88	0.0	-	UCUUCACAAAUUUAAGAAGACUGUCCAUUGA	27	1	164	0	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6161081-6161508	Cluster_4831	Pocillopora_meandrina_HIv1___Sc0000018	6161081	6161508	428	79	21	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	23	0	79	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6492736-6493260	Cluster_4832	Pocillopora_meandrina_HIv1___Sc0000018	6492736	6493260	525	1276	149	0.9992163009404389	+	CGACCAAAAAUCUUCUAGUGGGGGCUGGA	703	8	1235	6	15	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6620816-6621632	Cluster_4833	Pocillopora_meandrina_HIv1___Sc0000018	6620816	6621632	817	230	55	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	55	0	230	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6654229-6655045	Cluster_4834	Pocillopora_meandrina_HIv1___Sc0000018	6654229	6655045	817	223	50	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	59	1	222	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6671405-6671836	Cluster_4835	Pocillopora_meandrina_HIv1___Sc0000018	6671405	6671836	432	560	227	0.8857142857142857	+	UGUAUGAUGUUCAGGAUUUCAGGUCUG	39	13	514	1	5	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6672102-6672809	Cluster_4836	Pocillopora_meandrina_HIv1___Sc0000018	6672102	6672809	708	2016	417	0.9444444444444444	+	UGAUUUCCUGUUUGACUUGGUUGAAUG	200	16	1932	5	12	21	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6674039-6674468	Cluster_4837	Pocillopora_meandrina_HIv1___Sc0000018	6674039	6674468	430	284	157	0.852112676056338	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	35	2	261	0	3	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6855499-6855592	Cluster_4838	Pocillopora_meandrina_HIv1___Sc0000018	6855499	6855592	94	6913	289	1.0	+	GGAUUAAAAUUUGUUGGGUGUGC	1244	738	316	522	428	3428	1481	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000018:6857660-6858086	Cluster_4839	Pocillopora_meandrina_HIv1___Sc0000018	6857660	6858086	427	20161	307	1.0	+	CUCCGAACAGUUUUAGUCUGA	5735	4328	142	6562	1468	4746	2915	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6936995-6937412	Cluster_4840	Pocillopora_meandrina_HIv1___Sc0000018	6936995	6937412	418	71	19	1.0	+	UGAACUACUGCUCGUACUCUAGAUACG	28	1	70	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6967822-6968229	Cluster_4841	Pocillopora_meandrina_HIv1___Sc0000018	6967822	6968229	408	69	17	0.0	-	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	34	0	64	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6980526-6981623	Cluster_4842	Pocillopora_meandrina_HIv1___Sc0000018	6980526	6981623	1098	1666	479	0.13865546218487396	-	UCCUUGAGCAUUAUAGAAAACUGGGCUUA	123	31	1350	75	45	89	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6981728-6982155	Cluster_4843	Pocillopora_meandrina_HIv1___Sc0000018	6981728	6982155	428	369	110	0.10569105691056911	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	66	3	341	2	5	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7025700-7026117	Cluster_4844	Pocillopora_meandrina_HIv1___Sc0000018	7025700	7026117	418	114	21	0.9912280701754386	+	UCCGGCUCGAAGGACCAU	50	111	1	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7138819-7139235	Cluster_4845	Pocillopora_meandrina_HIv1___Sc0000018	7138819	7139235	417	263	183	1.0	+	AUAAGAUGUUGUCGUGUGCU	7	77	101	20	26	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7593444-7593873	Cluster_4846	Pocillopora_meandrina_HIv1___Sc0000018	7593444	7593873	430	151	79	1.0	+	GAUGACUACGUUAAAAGAUUACUGAACGCU	22	18	111	2	11	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7623761-7624181	Cluster_4847	Pocillopora_meandrina_HIv1___Sc0000018	7623761	7624181	421	86	33	0.9651162790697675	+	GUCUGUUAGAACCUGACCAAGCAU	12	10	25	14	14	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7694968-7695392	Cluster_4848	Pocillopora_meandrina_HIv1___Sc0000018	7694968	7695392	425	100	31	0.04	-	UGAACUACUGCUCGUACUCUAGAUAUG	23	9	86	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7843989-7844410	Cluster_4849	Pocillopora_meandrina_HIv1___Sc0000018	7843989	7844410	422	2956	67	1.0	+	UGAAAAUCUUUGCUCUGA	1419	2453	0	419	32	6	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7849913-7850333	Cluster_4850	Pocillopora_meandrina_HIv1___Sc0000018	7849913	7850333	421	234	123	0.029914529914529916	-	UCGAAUCCCACUUCUGACACCA	23	128	43	24	33	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7852651-7853079	Cluster_4851	Pocillopora_meandrina_HIv1___Sc0000018	7852651	7853079	429	2755	92	1.0	+	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1662	5	2746	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7863900-7864328	Cluster_4852	Pocillopora_meandrina_HIv1___Sc0000018	7863900	7864328	429	182	54	0.9835164835164835	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	67	0	165	0	0	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7864532-7864959	Cluster_4853	Pocillopora_meandrina_HIv1___Sc0000018	7864532	7864959	428	166	64	0.8855421686746988	+	ACAAGCGAUAUGUGGACCUUGAUCUGCGA	26	0	160	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7869456-7869886	Cluster_4854	Pocillopora_meandrina_HIv1___Sc0000018	7869456	7869886	431	231	57	0.9523809523809523	+	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	50	1	222	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7939216-7939628	Cluster_4855	Pocillopora_meandrina_HIv1___Sc0000018	7939216	7939628	413	144	93	0.041666666666666664	-	UAUUUGUGGAGGUCUUUGACGAUGGUAAA	12	0	133	0	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7966082-7967275	Cluster_4856	Pocillopora_meandrina_HIv1___Sc0000018	7966082	7967275	1194	1200	466	0.06583333333333333	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	107	11	1112	5	12	15	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7967560-7969176	Cluster_4857	Pocillopora_meandrina_HIv1___Sc0000018	7967560	7969176	1617	2964	1057	0.058029689608636977	-	UCGGACAUGACGUGUGAAAGAACCGCGCC	106	18	2808	5	12	38	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7969310-7969744	Cluster_4858	Pocillopora_meandrina_HIv1___Sc0000018	7969310	7969744	435	315	140	0.01904761904761905	-	UGACUAUCUGUUCUGGAAUUCCAAAUCUGGC	19	1	309	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8063916-8065979	Cluster_4859	Pocillopora_meandrina_HIv1___Sc0000018	8063916	8065979	2064	6017	1387	0.0835964766494931	-	UGUGAAUACUUCAGCUGGCCAACGAUC	852	102	5291	75	113	232	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8066079-8066502	Cluster_4860	Pocillopora_meandrina_HIv1___Sc0000018	8066079	8066502	424	663	100	0.03167420814479638	-	AAGGAAACUCUCACGUAUGAAGA	318	126	96	4	37	371	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8128517-8129091	Cluster_4861	Pocillopora_meandrina_HIv1___Sc0000018	8128517	8129091	575	954	307	0.16981132075471697	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	133	3	894	4	4	15	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8129368-8129860	Cluster_4862	Pocillopora_meandrina_HIv1___Sc0000018	8129368	8129860	493	987	272	0.11043566362715299	-	UAUAUAUCCUCUGUGAUUGUCUGAUCAC	189	2	924	7	7	21	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8130165-8131142	Cluster_4863	Pocillopora_meandrina_HIv1___Sc0000018	8130165	8131142	978	1901	342	0.0873224618621778	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	322	26	1821	2	3	4	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8131536-8132215	Cluster_4864	Pocillopora_meandrina_HIv1___Sc0000018	8131536	8132215	680	291	163	0.10996563573883161	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	22	6	265	8	1	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8253590-8254028	Cluster_4865	Pocillopora_meandrina_HIv1___Sc0000018	8253590	8254028	439	220	95	0.9136363636363637	+	UUGGAUCUCAAUCGAAACAGAAUUUCCUG	31	4	204	1	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8312293-8312720	Cluster_4866	Pocillopora_meandrina_HIv1___Sc0000018	8312293	8312720	428	163	30	0.9693251533742331	+	UCUUGCUUUGGGCUAACGAUAAGACGUG	52	0	159	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8324947-8325369	Cluster_4867	Pocillopora_meandrina_HIv1___Sc0000018	8324947	8325369	423	106	41	0.7924528301886793	.	UCGUGCAAUUUUGAGAACUUUCA	62	9	17	2	5	68	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8380667-8381089	Cluster_4868	Pocillopora_meandrina_HIv1___Sc0000018	8380667	8381089	423	379	55	0.9894459102902374	+	UUCGCGUCUGAAGCUGUUAGAGU	170	29	11	8	83	244	4	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8453577-8454328	Cluster_4869	Pocillopora_meandrina_HIv1___Sc0000018	8453577	8454328	752	802	247	0.972568578553616	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	72	1	783	3	1	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8454623-8455288	Cluster_4870	Pocillopora_meandrina_HIv1___Sc0000018	8454623	8455288	666	634	321	0.8580441640378549	+	UCAACUUUCUGGUAGUCUAACUGCUGUU	30	7	560	3	2	14	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8455309-8455933	Cluster_4871	Pocillopora_meandrina_HIv1___Sc0000018	8455309	8455933	625	1001	420	0.9600399600399601	+	UCUGUACAGGAAUUAUACGAAUAAUGGC	39	11	952	4	6	9	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8545759-8546159	Cluster_4872	Pocillopora_meandrina_HIv1___Sc0000018	8545759	8546159	401	170	94	0.058823529411764705	-	UAAUUCAAUUUUUGGAGGAACAGGGACGU	18	5	151	2	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8546192-8547524	Cluster_4873	Pocillopora_meandrina_HIv1___Sc0000018	8546192	8547524	1333	1994	618	0.10631895687061184	-	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	482	20	1886	6	14	18	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8547643-8548485	Cluster_4874	Pocillopora_meandrina_HIv1___Sc0000018	8547643	8548485	843	474	199	0.10970464135021098	-	UGUGUCAGAACCCGGCUUGCAUAAGUGA	103	11	440	3	5	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8548968-8549396	Cluster_4875	Pocillopora_meandrina_HIv1___Sc0000018	8548968	8549396	429	176	72	0.017045454545454544	-	UAGGUAUACCGUGAUUGGAGAAAUGGCGU	19	0	175	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8549581-8550019	Cluster_4876	Pocillopora_meandrina_HIv1___Sc0000018	8549581	8550019	439	4481	437	0.005802276277616604	-	UGAUGUAACCGUGAUCUUUGAAGGCCCGA	796	7	4342	25	9	22	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8558410-8558819	Cluster_4877	Pocillopora_meandrina_HIv1___Sc0000018	8558410	8558819	410	132	64	0.9621212121212122	+	UAAUCGCGGUAACAGCAGAACUUCCUUGGGU	23	0	126	0	0	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:18658-19086	Cluster_4878	Pocillopora_meandrina_HIv1___Sc0000019	18658	19086	429	159	42	0.012578616352201259	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	66	0	150	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:37218-37646	Cluster_4879	Pocillopora_meandrina_HIv1___Sc0000019	37218	37646	429	176	46	0.005681818181818182	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	64	0	164	0	0	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:55061-55491	Cluster_4880	Pocillopora_meandrina_HIv1___Sc0000019	55061	55491	431	383	67	0.015665796344647518	-	UGAUGAGCGAUAUCGCAGAACAGCUGCUGA	64	0	380	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:55801-56229	Cluster_4881	Pocillopora_meandrina_HIv1___Sc0000019	55801	56229	429	185	44	0.016216216216216217	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	74	1	173	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:75217-76278	Cluster_4882	Pocillopora_meandrina_HIv1___Sc0000019	75217	76278	1062	3249	685	0.6272699292089874	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	412	147	2846	20	64	52	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:154260-154856	Cluster_4883	Pocillopora_meandrina_HIv1___Sc0000019	154260	154856	597	5472	500	0.9952485380116959	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	825	13	5403	5	6	13	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:182875-183304	Cluster_4884	Pocillopora_meandrina_HIv1___Sc0000019	182875	183304	430	341	39	0.0	-	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	160	0	341	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:184691-185113	Cluster_4885	Pocillopora_meandrina_HIv1___Sc0000019	184691	185113	423	100	50	0.75	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	16	1	95	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:187362-187790	Cluster_4886	Pocillopora_meandrina_HIv1___Sc0000019	187362	187790	429	117	41	0.0	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	40	0	108	1	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:213664-214087	Cluster_4887	Pocillopora_meandrina_HIv1___Sc0000019	213664	214087	424	1523	87	1.0	+	UACAAAAUGUGCUUCAGGUCCAAU	674	53	39	107	63	319	942	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:410963-411377	Cluster_4888	Pocillopora_meandrina_HIv1___Sc0000019	410963	411377	415	233	156	0.0	-	CUUCUGUUCUGGAAAUUCUUGACA	8	37	129	20	11	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:412636-413053	Cluster_4889	Pocillopora_meandrina_HIv1___Sc0000019	412636	413053	418	330	240	0.006060606060606061	-	CUCGUGAGAUGCUGCAGCAGAACA	8	71	131	26	35	29	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:414464-414889	Cluster_4890	Pocillopora_meandrina_HIv1___Sc0000019	414464	414889	426	290	190	0.0	-	AUCGAGUUUGGAGAGCUGUAAGGAGUUGA	14	69	132	29	15	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:454046-454847	Cluster_4891	Pocillopora_meandrina_HIv1___Sc0000019	454046	454847	802	1576	515	0.053934010152284266	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	186	10	1472	10	19	31	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:646583-647106	Cluster_4892	Pocillopora_meandrina_HIv1___Sc0000019	646583	647106	524	1370	218	0.02408759124087591	-	UUUGAUAUAAAGGUUGUGGAAAAACAGU	151	6	1293	8	7	33	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:813192-813621	Cluster_4893	Pocillopora_meandrina_HIv1___Sc0000019	813192	813621	430	475	131	0.023157894736842106	-	UGUAGAAUCAAUCUGUUACUAAGACACC	100	0	450	14	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:904555-904984	Cluster_4894	Pocillopora_meandrina_HIv1___Sc0000019	904555	904984	430	349	47	0.0057306590257879654	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	139	1	346	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:905738-906334	Cluster_4895	Pocillopora_meandrina_HIv1___Sc0000019	905738	906334	597	5797	473	0.0027600483008452647	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	893	10	5749	2	4	8	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1035043-1035449	Cluster_4896	Pocillopora_meandrina_HIv1___Sc0000019	1035043	1035449	407	149	99	0.0	-	AACAGAAACUGACGCGUCA	9	43	64	11	14	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1236348-1236769	Cluster_4897	Pocillopora_meandrina_HIv1___Sc0000019	1236348	1236769	422	271	114	1.0	+	GGUGUCUGAAUCUGACUGAGA	58	47	65	78	31	39	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1262957-1263485	Cluster_4898	Pocillopora_meandrina_HIv1___Sc0000019	1262957	1263485	529	2991	707	0.00033433634236041456	-	GUUUGAUGAUGACUUCUGCCAUGCU	160	708	1175	205	192	191	520	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1280313-1280734	Cluster_4899	Pocillopora_meandrina_HIv1___Sc0000019	1280313	1280734	422	498	55	0.9698795180722891	+	UGGAAUAAUAAUAGUGGUACU	192	29	0	287	161	19	2	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1327248-1327665	Cluster_4900	Pocillopora_meandrina_HIv1___Sc0000019	1327248	1327665	418	81	6	0.9629629629629629	+	CACUCCCUAGACCUCAUU	71	79	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1446512-1447028	Cluster_4901	Pocillopora_meandrina_HIv1___Sc0000019	1446512	1447028	517	16179	539	0.9482044625749428	+	CGAUCCAACAAGAACAAUAUGUGCUGACC	3760	10	15870	14	12	61	212	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1824339-1824957	Cluster_4902	Pocillopora_meandrina_HIv1___Sc0000019	1824339	1824957	619	600	230	0.31166666666666665	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	66	3	540	3	2	12	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1838518-1838935	Cluster_4903	Pocillopora_meandrina_HIv1___Sc0000019	1838518	1838935	418	79	27	1.0	+	AAGAAAGAAGACCCUGGGAAU	10	37	2	28	6	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1884122-1884540	Cluster_4904	Pocillopora_meandrina_HIv1___Sc0000019	1884122	1884540	419	905	51	0.9977900552486187	+	CGCUACUUUGACCUCAUU	461	900	1	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1960329-1960763	Cluster_4905	Pocillopora_meandrina_HIv1___Sc0000019	1960329	1960763	435	1234	256	0.0008103727714748784	-	GAAUAAUUUUGUUGAGGUGCAUUAUCUGACU	137	121	967	44	31	29	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1960846-1961285	Cluster_4906	Pocillopora_meandrina_HIv1___Sc0000019	1960846	1961285	440	1193	237	0.0016764459346186086	-	UUUUGAUGUUGAGAUGCAGUUAUCUGACU	148	50	1049	29	23	22	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1990219-1990640	Cluster_4907	Pocillopora_meandrina_HIv1___Sc0000019	1990219	1990640	422	1478	57	1.0	+	UCUGACGAAGGGCUGACACUCA	877	23	2	467	939	30	17	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1996128-1996558	Cluster_4908	Pocillopora_meandrina_HIv1___Sc0000019	1996128	1996558	431	253	96	0.21739130434782608	.	UGCCAGAAGUGUGAAACUACUUGAACCG	30	5	236	3	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2021781-2022202	Cluster_4909	Pocillopora_meandrina_HIv1___Sc0000019	2021781	2022202	422	80	3	0.9875	+	UCUGACGAAGGGCUGACACUCG	77	0	1	0	77	2	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2023002-2023431	Cluster_4910	Pocillopora_meandrina_HIv1___Sc0000019	2023002	2023431	430	350	60	0.9828571428571429	+	GGCAGUGGUUUUUUGGAUUCUGAUCAGUGU	107	4	338	4	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2027003-2027614	Cluster_4911	Pocillopora_meandrina_HIv1___Sc0000019	2027003	2027614	612	227	110	0.5066079295154186	.	UGGGCUGUUAUUCGUUUGAUAUCAUAAAUC	19	5	211	0	1	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2047134-2047555	Cluster_4912	Pocillopora_meandrina_HIv1___Sc0000019	2047134	2047555	422	70	1	1.0	+	UCUGACGAAGGGCUGACACUCG	70	0	0	0	70	0	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2048332-2048767	Cluster_4913	Pocillopora_meandrina_HIv1___Sc0000019	2048332	2048767	436	796	139	0.9309045226130653	+	GGCAGUGGUUUUUUGGAUUCUGAUCAGUGU	158	11	766	7	6	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2052530-2052967	Cluster_4914	Pocillopora_meandrina_HIv1___Sc0000019	2052530	2052967	438	379	160	0.3482849604221636	.	AUCUACUACAGAUCGCUUGAUGGAUUGCA	32	15	345	5	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2099238-2099683	Cluster_4915	Pocillopora_meandrina_HIv1___Sc0000019	2099238	2099683	446	529	123	0.23440453686200377	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	201	1	509	5	0	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2423518-2424063	Cluster_4916	Pocillopora_meandrina_HIv1___Sc0000019	2423518	2424063	546	3622	401	0.037272225289895086	-	UCGAUUCGUAAACUGUGCCAAUGGUUGUC	557	33	3525	4	12	14	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2426209-2426803	Cluster_4917	Pocillopora_meandrina_HIv1___Sc0000019	2426209	2426803	595	590	207	0.16610169491525423	-	UGUAAUAAAGUAUCUGUAACACCUGAUGGGC	72	6	565	1	1	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2463849-2464507	Cluster_4918	Pocillopora_meandrina_HIv1___Sc0000019	2463849	2464507	659	27841	739	0.0	-	UUUCCAUAUUUGAACGCUGACGACAGUACGU	5376	10	27483	5	3	145	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2480011-2480551	Cluster_4919	Pocillopora_meandrina_HIv1___Sc0000019	2480011	2480551	541	580	147	0.21724137931034482	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	165	1	558	2	2	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2566821-2567246	Cluster_4920	Pocillopora_meandrina_HIv1___Sc0000019	2566821	2567246	426	200	106	0.0	-	GAUGGAUGACCUUGAAUGAUGGGAGCA	19	23	110	11	9	32	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2716498-2716927	Cluster_4921	Pocillopora_meandrina_HIv1___Sc0000019	2716498	2716927	430	90	30	0.9444444444444444	+	GUGAGUCUGAUACAUCUUGCCGCACAUGGA	47	0	84	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2737293-2737718	Cluster_4922	Pocillopora_meandrina_HIv1___Sc0000019	2737293	2737718	426	269	32	0.0	-	AGGGACUGAAACAUCGACUGAAGACA	59	2	81	38	1	43	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2861479-2861910	Cluster_4923	Pocillopora_meandrina_HIv1___Sc0000019	2861479	2861910	432	179	73	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	17	4	167	0	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2977964-2978402	Cluster_4924	Pocillopora_meandrina_HIv1___Sc0000019	2977964	2978402	439	447	169	0.0022371364653243847	-	UCCUAAAUCGAUCUUAUCUGUCUGUAAUU	37	0	410	5	3	24	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3406670-3407099	Cluster_4925	Pocillopora_meandrina_HIv1___Sc0000019	3406670	3407099	430	888	142	0.9966216216216216	+	AAAAGAACGAAGAAGCUGCCAAGA	236	15	346	110	9	74	334	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3506636-3507081	Cluster_4926	Pocillopora_meandrina_HIv1___Sc0000019	3506636	3507081	446	294	118	0.6190476190476191	.	UGUGACACUUUGAGACACUCGUGAGACA	39	0	270	6	1	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3563986-3564415	Cluster_4927	Pocillopora_meandrina_HIv1___Sc0000019	3563986	3564415	430	137	24	0.0	-	UGUACUGUGAACAUAGUGUUACCAACCAUU	70	0	137	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3566354-3567050	Cluster_4928	Pocillopora_meandrina_HIv1___Sc0000019	3566354	3567050	697	1924	312	0.032224532224532226	-	UUGGACGCGUUGCUUGUCUGAACAAGGC	229	5	1767	107	6	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3567084-3567520	Cluster_4929	Pocillopora_meandrina_HIv1___Sc0000019	3567084	3567520	437	347	136	0.023054755043227664	-	UGAUCAUGCCGUCUGAUGCUAUGCCUUU	56	0	341	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3593610-3594168	Cluster_4930	Pocillopora_meandrina_HIv1___Sc0000019	3593610	3594168	559	497	101	0.0	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	87	43	347	92	0	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3721231-3721657	Cluster_4931	Pocillopora_meandrina_HIv1___Sc0000019	3721231	3721657	427	119	24	0.0	-	UCUUUCUGUGUUCAGUAGUGAUCUGCAUC	35	0	119	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3735302-3735776	Cluster_4932	Pocillopora_meandrina_HIv1___Sc0000019	3735302	3735776	475	274	107	0.014598540145985401	-	UGAAUCUUGAUGUGAGUGCUGUCAACACA	37	2	261	2	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3736324-3736752	Cluster_4933	Pocillopora_meandrina_HIv1___Sc0000019	3736324	3736752	429	1051	132	0.015223596574690771	-	UGUUGAACUCUUGCUGCUUGUCAGUGAC	532	4	1008	0	28	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3740698-3741217	Cluster_4934	Pocillopora_meandrina_HIv1___Sc0000019	3740698	3741217	520	874	270	0.19908466819221968	-	UGAUAUGACCUUCGGCAAAAAACUGGA	88	5	758	3	4	24	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3741222-3742488	Cluster_4935	Pocillopora_meandrina_HIv1___Sc0000019	3741222	3742488	1267	1374	542	0.2066957787481805	.	UGUAACUGGUUCACUGCGAUUUUGUAGU	91	18	1197	9	10	40	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3744261-3745833	Cluster_4936	Pocillopora_meandrina_HIv1___Sc0000019	3744261	3745833	1573	3248	854	0.7752463054187192	.	UUGGUUCGGUUGUUGUCACUUUUGAAGU	266	55	2956	12	30	59	136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3746116-3746546	Cluster_4937	Pocillopora_meandrina_HIv1___Sc0000019	3746116	3746546	431	215	119	0.17674418604651163	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	28	1	196	2	3	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3747775-3748476	Cluster_4938	Pocillopora_meandrina_HIv1___Sc0000019	3747775	3748476	702	273	124	0.08424908424908426	-	UGUACUUUGUCUUUGUUGAAUUUGAUUC	28	4	257	3	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3750256-3750997	Cluster_4939	Pocillopora_meandrina_HIv1___Sc0000019	3750256	3750997	742	616	257	0.8928571428571429	+	UCGCUGUAUUAAUGAACGCUUUUUCGGGA	58	6	559	0	11	12	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3756008-3758566	Cluster_4940	Pocillopora_meandrina_HIv1___Sc0000019	3756008	3758566	2559	4469	1295	0.04497650481091967	-	CUCCAUCUUGUCUGUUGAGUUCAACACC	169	27	4238	16	12	76	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3764468-3764886	Cluster_4941	Pocillopora_meandrina_HIv1___Sc0000019	3764468	3764886	419	116	61	0.008620689655172414	-	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	18	3	102	0	0	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3765659-3766696	Cluster_4942	Pocillopora_meandrina_HIv1___Sc0000019	3765659	3766696	1038	2572	709	0.06998444790046657	-	UGUACUUUCUUUGGGCCAUGUAAUCU	181	28	2367	34	16	42	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3766787-3767719	Cluster_4943	Pocillopora_meandrina_HIv1___Sc0000019	3766787	3767719	933	1327	418	0.14318010550113036	-	UGUGUGUUGAUGACAUCUUUGGGUAAAA	106	12	1150	6	14	58	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3769159-3769595	Cluster_4944	Pocillopora_meandrina_HIv1___Sc0000019	3769159	3769595	437	265	121	0.19245283018867926	-	UGUGAUUUCAACUGUGAGUGUCAGAA	14	5	233	1	3	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3769609-3770163	Cluster_4945	Pocillopora_meandrina_HIv1___Sc0000019	3769609	3770163	555	1054	260	0.028462998102466792	-	UGCUUGACUUAUAGUCACUGUACAACUGACU	89	6	1038	3	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3772151-3772578	Cluster_4946	Pocillopora_meandrina_HIv1___Sc0000019	3772151	3772578	428	93	39	0.010752688172043012	-	UUAUUUCCUUGUAUUUCUUUAGAACUUGUA	24	3	89	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3773355-3773782	Cluster_4947	Pocillopora_meandrina_HIv1___Sc0000019	3773355	3773782	428	218	96	0.0	-	UCGGAAACUCUGUCGCUCUCUUAUAUUCU	20	4	207	0	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3774113-3774760	Cluster_4948	Pocillopora_meandrina_HIv1___Sc0000019	3774113	3774760	648	2492	408	0.010032102728731942	-	UCCAACUGUCAUGAACUUGUUACAAUUUAC	249	39	2387	5	13	23	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3775176-3775611	Cluster_4949	Pocillopora_meandrina_HIv1___Sc0000019	3775176	3775611	436	1026	121	0.0009746588693957114	-	UAAUAUCAUCUUACAAAUGUUUAGGACAUG	319	3	1017	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3776588-3777012	Cluster_4950	Pocillopora_meandrina_HIv1___Sc0000019	3776588	3777012	425	165	67	0.006060606060606061	-	UGUUCUCUGCGAUGUGAUAGAAUCCACGUGC	28	7	150	1	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3777317-3777835	Cluster_4951	Pocillopora_meandrina_HIv1___Sc0000019	3777317	3777835	519	418	154	0.0215311004784689	-	UCUUAUCUGCAAGAUGCUUCUGGAAACGC	30	3	402	0	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3779708-3781221	Cluster_4952	Pocillopora_meandrina_HIv1___Sc0000019	3779708	3781221	1514	32626	3217	0.04763072396248391	-	UGUGAAACCCCGGUCUGCCAUAACCAUGUC	3917	354	31071	110	192	295	604	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3782569-3783025	Cluster_4953	Pocillopora_meandrina_HIv1___Sc0000019	3782569	3783025	457	279	133	0.0	-	UAAGAACGAGACGUCCAGAAGAAGACUUUU	38	1	269	1	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3783437-3784268	Cluster_4954	Pocillopora_meandrina_HIv1___Sc0000019	3783437	3784268	832	686	214	0.0	-	UUCGCGCGAAGAUCUAAAAAAAACAUUUGU	156	2	671	5	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3787982-3788407	Cluster_4955	Pocillopora_meandrina_HIv1___Sc0000019	3787982	3788407	426	195	71	0.020512820512820513	-	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	30	1	184	3	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3792172-3792891	Cluster_4956	Pocillopora_meandrina_HIv1___Sc0000019	3792172	3792891	720	104848	1393	0.00011445139630703495	-	UAGGAAUUGCCCUGGACUGCAGUAGAGGC	24159	191	103857	91	39	457	213	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3793197-3793857	Cluster_4957	Pocillopora_meandrina_HIv1___Sc0000019	3793197	3793857	661	7372	500	0.15925122083559415	-	UUGAUUUUGAUGGGAUGCUGCUGCCCUGUA	795	194	6434	40	110	314	280	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3796494-3797437	Cluster_4958	Pocillopora_meandrina_HIv1___Sc0000019	3796494	3797437	944	6554	754	0.032194079951174855	-	UGCUUCAGAUUACUCGACAUGCUAGACA	439	165	6074	60	42	54	159	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3797742-3799350	Cluster_4959	Pocillopora_meandrina_HIv1___Sc0000019	3797742	3799350	1609	8241	1219	0.021113942482708408	-	UAUGAUCUUACAAGAACUGAACUGUGUA	797	17	8075	10	23	38	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3802607-3803033	Cluster_4960	Pocillopora_meandrina_HIv1___Sc0000019	3802607	3803033	427	154	52	0.0	-	UGAUGUUAUACUGUGAAAUCUCGUACCCA	17	1	150	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3804226-3805530	Cluster_4961	Pocillopora_meandrina_HIv1___Sc0000019	3804226	3805530	1305	12353	1338	0.06638063628268437	-	UAUAAUCUGACCACGUCUCUGACUGGGC	1589	188	11343	80	68	276	398	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3809983-3810411	Cluster_4962	Pocillopora_meandrina_HIv1___Sc0000019	3809983	3810411	429	372	70	0.01881720430107527	-	UGAGGAACUUGAAUGGAUAACUCCGGAU	98	2	340	1	0	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3814286-3815767	Cluster_4963	Pocillopora_meandrina_HIv1___Sc0000019	3814286	3815767	1482	14943	1949	0.06484641638225255	-	UCCAUCUAUUGAAACAGCAACUUUGCACACU	1409	83	13720	62	196	234	648	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3816734-3817153	Cluster_4964	Pocillopora_meandrina_HIv1___Sc0000019	3816734	3817153	420	214	83	0.0	-	AAAGAAGUACAAGUGGUAGAU	35	54	101	55	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3822005-3823273	Cluster_4965	Pocillopora_meandrina_HIv1___Sc0000019	3822005	3823273	1269	7822	1173	0.02467399642035285	-	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1547	48	7510	19	61	95	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3823324-3824688	Cluster_4966	Pocillopora_meandrina_HIv1___Sc0000019	3823324	3824688	1365	2622	926	0.0019069412662090007	-	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	122	17	2547	7	11	18	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3825490-3826345	Cluster_4967	Pocillopora_meandrina_HIv1___Sc0000019	3825490	3826345	856	663	251	0.38009049773755654	.	UGAUAACUAUGGACACUGGCC	78	35	452	141	16	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3828011-3828678	Cluster_4968	Pocillopora_meandrina_HIv1___Sc0000019	3828011	3828678	668	1889	348	0.0021175224986765486	-	UACGGUGAAUUCGUCGACUACAACAUGGA	373	26	1833	9	7	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3829320-3830050	Cluster_4969	Pocillopora_meandrina_HIv1___Sc0000019	3829320	3830050	731	654	284	0.0030581039755351682	-	UGGUAGAAAUCCGUCUGAUACAAUCUUC	58	20	613	2	2	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3830252-3832893	Cluster_4970	Pocillopora_meandrina_HIv1___Sc0000019	3830252	3832893	2642	11319	2202	0.010513296227581941	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1223	31	11037	25	30	64	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3833266-3835567	Cluster_4971	Pocillopora_meandrina_HIv1___Sc0000019	3833266	3835567	2302	3805	1175	0.00026281208935611036	-	UCGCUUGCCUUACUUUUAAGCCAUACUGU	195	110	3598	12	28	19	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3835592-3836223	Cluster_4972	Pocillopora_meandrina_HIv1___Sc0000019	3835592	3836223	632	1058	361	0.0	-	UCGGUCAGAAAUGUUGAAAUACACUUUGA	56	6	1023	3	3	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3836384-3836797	Cluster_4973	Pocillopora_meandrina_HIv1___Sc0000019	3836384	3836797	414	157	86	0.0	-	UGGUAGACAAACUCAUUGACUGCGCUCUGC	22	6	140	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3836844-3838490	Cluster_4974	Pocillopora_meandrina_HIv1___Sc0000019	3836844	3838490	1647	6782	1195	0.0007372456502506635	-	UUGCAUCACUUUUAAACAAUGCUGUGGGU	535	75	6615	17	20	36	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3839036-3839953	Cluster_4975	Pocillopora_meandrina_HIv1___Sc0000019	3839036	3839953	918	2934	724	0.0006816632583503749	-	UGGAAAUGAUCCCGAUUGAACCUUACGUC	196	13	2852	13	11	26	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3840104-3841485	Cluster_4976	Pocillopora_meandrina_HIv1___Sc0000019	3840104	3841485	1382	47963	2579	0.002293434522444384	-	UAGGAUCGAAAGUAACCAAUCAUUGAAUA	4599	349	46814	205	99	160	336	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3841533-3842666	Cluster_4977	Pocillopora_meandrina_HIv1___Sc0000019	3841533	3842666	1134	33675	2152	0.0028507795100222717	-	UUCGAUAUUUUGCUAGAAGUGUGAAAA	4910	269	32442	179	122	127	536	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3842916-3844850	Cluster_4978	Pocillopora_meandrina_HIv1___Sc0000019	3842916	3844850	1935	19078	1712	0.0006289967501834574	-	UUUAGGAUCGAAAGUAACCAAUCAUCGAGU	5705	412	17686	234	120	433	193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3845351-3845877	Cluster_4979	Pocillopora_meandrina_HIv1___Sc0000019	3845351	3845877	527	1587	283	0.000630119722747322	-	UGAUUUAUGAUUGGCUGUUAGGCUGGCUC	199	19	1474	17	38	20	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3846212-3847405	Cluster_4980	Pocillopora_meandrina_HIv1___Sc0000019	3846212	3847405	1194	19390	1713	0.001444043321299639	-	UAGGAUCGAAAGUAACCAAUCAUUGAAUA	2775	157	18683	108	69	95	278	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3848216-3848685	Cluster_4981	Pocillopora_meandrina_HIv1___Sc0000019	3848216	3848685	470	505	178	0.007920792079207921	-	UACAAAGCUCUCACGAAUUCACAAACAGA	56	0	498	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3849104-3850240	Cluster_4982	Pocillopora_meandrina_HIv1___Sc0000019	3849104	3850240	1137	1429	573	0.013995801259622114	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	84	15	1380	2	7	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3850360-3851238	Cluster_4983	Pocillopora_meandrina_HIv1___Sc0000019	3850360	3851238	879	884	386	0.019230769230769232	-	UGCUGAAACGAUUUUGACAGGUUGUCA	58	8	839	5	3	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3851407-3852097	Cluster_4984	Pocillopora_meandrina_HIv1___Sc0000019	3851407	3852097	691	986	338	0.007099391480730223	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	99	2	973	3	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3852504-3853375	Cluster_4985	Pocillopora_meandrina_HIv1___Sc0000019	3852504	3853375	872	6693	700	0.00029881966233378154	-	UUUAGGAUCGAAAGUAACCAAUCAUUGAAUA	951	30	6551	14	16	27	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3920176-3920892	Cluster_4986	Pocillopora_meandrina_HIv1___Sc0000019	3920176	3920892	717	362	185	0.0718232044198895	-	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	30	2	331	4	1	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3923034-3923564	Cluster_4987	Pocillopora_meandrina_HIv1___Sc0000019	3923034	3923564	531	622	255	0.014469453376205787	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	32	5	604	4	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3923685-3924115	Cluster_4988	Pocillopora_meandrina_HIv1___Sc0000019	3923685	3924115	431	616	148	0.017857142857142856	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	129	0	611	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3930860-3932086	Cluster_4989	Pocillopora_meandrina_HIv1___Sc0000019	3930860	3932086	1227	3976	870	0.9499496981891348	+	UACUUUCUCUGUGACGGUUGACAUCAUG	277	50	3754	9	26	46	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3932170-3932596	Cluster_4990	Pocillopora_meandrina_HIv1___Sc0000019	3932170	3932596	427	124	48	0.8790322580645161	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	48	0	111	1	6	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3933467-3934738	Cluster_4991	Pocillopora_meandrina_HIv1___Sc0000019	3933467	3934738	1272	1208	469	0.9163907284768212	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	85	13	1137	3	7	14	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3969781-3970333	Cluster_4992	Pocillopora_meandrina_HIv1___Sc0000019	3969781	3970333	553	216	64	0.9305555555555556	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	44	1	198	1	3	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3970686-3971285	Cluster_4993	Pocillopora_meandrina_HIv1___Sc0000019	3970686	3971285	600	1523	303	0.8115561391989494	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	506	11	1434	6	8	17	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4422719-4423146	Cluster_4994	Pocillopora_meandrina_HIv1___Sc0000019	4422719	4423146	428	93	7	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	61	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4424090-4424494	Cluster_4995	Pocillopora_meandrina_HIv1___Sc0000019	4424090	4424494	405	92	43	0.30434782608695654	.	UGAAUGUUGCGAAGCUCUUCGUCCAAAAGA	14	1	85	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4626626-4627050	Cluster_4996	Pocillopora_meandrina_HIv1___Sc0000019	4626626	4627050	425	147	15	1.0	+	UGGUCUGAAGAAAAAAAAAAAAAAA	34	0	89	2	9	14	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4697499-4697931	Cluster_4997	Pocillopora_meandrina_HIv1___Sc0000019	4697499	4697931	433	417	84	0.03117505995203837	-	UCGAUUCCGCGAUGACUACAAUACGUUCUGU	95	2	413	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4747108-4747592	Cluster_4998	Pocillopora_meandrina_HIv1___Sc0000019	4747108	4747592	485	1056	262	0.42045454545454547	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	243	73	684	14	38	100	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4979222-4979641	Cluster_4999	Pocillopora_meandrina_HIv1___Sc0000019	4979222	4979641	420	240	166	0.4708333333333333	.	UACCGAACUUAGCAAACACA	11	124	9	68	24	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4988937-4989354	Cluster_5000	Pocillopora_meandrina_HIv1___Sc0000019	4988937	4989354	418	158	83	0.7025316455696202	.	AACACUACUACCGUGAGACUGAAG	18	5	108	4	3	8	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5004635-5005059	Cluster_5001	Pocillopora_meandrina_HIv1___Sc0000019	5004635	5005059	425	165	87	0.04242424242424243	-	UACGUACUCUCUGAUAUCUGAAUGAAAG	12	0	160	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5181281-5181698	Cluster_5002	Pocillopora_meandrina_HIv1___Sc0000019	5181281	5181698	418	95	3	0.9789473684210527	+	UUGAACUCGACCCUGUCG	93	93	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5259201-5259623	Cluster_5003	Pocillopora_meandrina_HIv1___Sc0000019	5259201	5259623	423	234	157	0.9871794871794872	+	GACGGAAUUGCUAGUGUUAAACACGAAAU	13	42	123	14	26	20	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5416500-5416927	Cluster_5004	Pocillopora_meandrina_HIv1___Sc0000019	5416500	5416927	428	188	84	0.0	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	26	4	177	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5426462-5426886	Cluster_5005	Pocillopora_meandrina_HIv1___Sc0000019	5426462	5426886	425	72	11	0.0	-	UGAACUACUGCUCGUACUCUAGAUAUA	58	0	72	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5428082-5428745	Cluster_5006	Pocillopora_meandrina_HIv1___Sc0000019	5428082	5428745	664	595	232	0.32941176470588235	.	UAAGACAACAUCUUUUAAAGAGCCUGG	44	9	542	5	12	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5430014-5430794	Cluster_5007	Pocillopora_meandrina_HIv1___Sc0000019	5430014	5430794	781	983	203	0.36012207527975587	.	UUCUACCCAUCAACUGUGCGAUUUCAAGA	110	20	929	9	10	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5434354-5434782	Cluster_5008	Pocillopora_meandrina_HIv1___Sc0000019	5434354	5434782	429	121	31	0.01652892561983471	-	UCCGUGAUUCAGAUUAAAAAUUCAGAUGA	22	0	115	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5435341-5435770	Cluster_5009	Pocillopora_meandrina_HIv1___Sc0000019	5435341	5435770	430	144	54	0.0	-	UGUUCAAUACGUGGGCUGUCUUAUUCAAGC	39	0	141	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5437576-5438003	Cluster_5010	Pocillopora_meandrina_HIv1___Sc0000019	5437576	5438003	428	83	31	0.0	-	UCCACGUGUAAAUGAUCGAGUCUGUAUCAC	30	1	82	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5443093-5443583	Cluster_5011	Pocillopora_meandrina_HIv1___Sc0000019	5443093	5443583	491	236	88	0.00423728813559322	-	UAGGGAUAAUCGGUCUUCUAAUGUACUGGA	37	16	217	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5444458-5444886	Cluster_5012	Pocillopora_meandrina_HIv1___Sc0000019	5444458	5444886	429	319	51	0.0	-	UAUAGAACUCUUUAGGUUGUGAGAUGGAG	117	6	229	80	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5446707-5447270	Cluster_5013	Pocillopora_meandrina_HIv1___Sc0000019	5446707	5447270	564	799	225	0.0	-	UCUUGCUUUGGCUGAGACGAGAGACUGUGU	60	3	781	3	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5447713-5448138	Cluster_5014	Pocillopora_meandrina_HIv1___Sc0000019	5447713	5448138	426	143	73	0.0	-	UGAGUAGAUCACUCUGGGACGUCCUCGCC	17	4	131	3	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5448830-5449258	Cluster_5015	Pocillopora_meandrina_HIv1___Sc0000019	5448830	5449258	429	312	75	0.0	-	UGUAAAGAGCUACUCUGGAAACUUGAAGC	75	2	308	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5458238-5458661	Cluster_5016	Pocillopora_meandrina_HIv1___Sc0000019	5458238	5458661	424	126	62	0.015873015873015872	-	UGAUCUGAUCUUGGCGACAUUAUCCUC	21	4	119	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5460529-5460955	Cluster_5017	Pocillopora_meandrina_HIv1___Sc0000019	5460529	5460955	427	108	35	0.0	-	UCCGACUGGGUCUCUCUGUAUUUGAGAAGC	19	1	104	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5467431-5468262	Cluster_5018	Pocillopora_meandrina_HIv1___Sc0000019	5467431	5468262	832	483	182	0.20496894409937888	.	AUCCCUUUUAGUAACCUUAUUGAA	78	24	334	7	7	16	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5468365-5469128	Cluster_5019	Pocillopora_meandrina_HIv1___Sc0000019	5468365	5469128	764	2649	461	0.013590033975084938	-	UCGUUUCUCAUCUACCUUGUGUUCUUG	194	15	2539	2	35	27	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5474494-5474917	Cluster_5020	Pocillopora_meandrina_HIv1___Sc0000019	5474494	5474917	424	122	47	0.0	-	UGAGUGUAUUCUUGAACUGUUUUCCAAC	47	1	119	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5477906-5478336	Cluster_5021	Pocillopora_meandrina_HIv1___Sc0000019	5477906	5478336	431	189	69	0.005291005291005291	-	UUCAAUGUGAAAUAGUUUAUUGAGGAAUGGU	47	0	185	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5478779-5479203	Cluster_5022	Pocillopora_meandrina_HIv1___Sc0000019	5478779	5479203	425	218	98	0.0	-	UGUUUACAGAGGUUUGGGUUGAUGAUCUU	17	1	210	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5482065-5482491	Cluster_5023	Pocillopora_meandrina_HIv1___Sc0000019	5482065	5482491	427	202	112	0.039603960396039604	-	UGAAAGUGUGCACAAGUAUUUCUGCUG	14	3	192	0	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5482975-5483420	Cluster_5024	Pocillopora_meandrina_HIv1___Sc0000019	5482975	5483420	446	869	170	0.006904487917146145	-	UAACUCUGAUUGCUUAAUCCCUCACUGAUG	153	3	849	2	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5483634-5485029	Cluster_5025	Pocillopora_meandrina_HIv1___Sc0000019	5483634	5485029	1396	4398	1252	0.1605275125056844	-	AUCCCACUUCUGACACCA	159	292	3727	26	82	127	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5485757-5486184	Cluster_5026	Pocillopora_meandrina_HIv1___Sc0000019	5485757	5486184	428	365	163	0.03287671232876712	-	UAUCACACUUGUGCUGCCAUGCUGGACA	52	0	347	0	1	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5486851-5489307	Cluster_5027	Pocillopora_meandrina_HIv1___Sc0000019	5486851	5489307	2457	12239	2911	0.03995424462782907	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	494	123	11129	64	103	166	654	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5489974-5490852	Cluster_5028	Pocillopora_meandrina_HIv1___Sc0000019	5489974	5490852	879	912	452	0.22149122807017543	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	82	23	787	12	15	19	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5490886-5491827	Cluster_5029	Pocillopora_meandrina_HIv1___Sc0000019	5490886	5491827	942	763	311	0.08125819134993446	-	UAUUCCAAUCUCCUCUGAAACUCUUCCGGA	75	7	699	3	5	27	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5492614-5493023	Cluster_5030	Pocillopora_meandrina_HIv1___Sc0000019	5492614	5493023	410	175	112	0.15428571428571428	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	18	0	160	0	3	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5493125-5493791	Cluster_5031	Pocillopora_meandrina_HIv1___Sc0000019	5493125	5493791	667	575	260	0.02782608695652174	-	UCUGUUCUGACUUGAUAGGACCUUAUGUC	44	7	549	3	5	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5494122-5494552	Cluster_5032	Pocillopora_meandrina_HIv1___Sc0000019	5494122	5494552	431	889	254	0.43082114735658045	.	ACCCAGUUGAAGAACGAGAGACGU	101	5	559	3	18	84	220	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5495048-5495690	Cluster_5033	Pocillopora_meandrina_HIv1___Sc0000019	5495048	5495690	643	2288	450	0.02666083916083916	-	UGUUCCUUGAAUUCUGCGUGCACAAAGC	320	25	2172	17	12	16	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5495833-5498649	Cluster_5034	Pocillopora_meandrina_HIv1___Sc0000019	5495833	5498649	2817	6469	1946	0.07481836450765188	-	UGUUUGCAGUUAUGAAUGAAUCUCUUUAGC	509	111	5994	51	42	105	166	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5498925-5499650	Cluster_5035	Pocillopora_meandrina_HIv1___Sc0000019	5498925	5499650	726	2427	358	0.014833127317676144	-	UGACAAAUUUUCAUGGCUCCUUUCACAGA	474	58	2262	13	19	20	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5500882-5501311	Cluster_5036	Pocillopora_meandrina_HIv1___Sc0000019	5500882	5501311	430	271	78	0.025830258302583026	-	UGGUCUUGAAAUAUGGUGACACCCAAUCUG	70	6	256	4	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5511087-5512628	Cluster_5037	Pocillopora_meandrina_HIv1___Sc0000019	5511087	5512628	1542	1522	327	0.11695137976346912	-	UGGGUAAACAGACUUUGCACUUUGUAUGC	302	24	1426	16	11	14	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5514558-5514964	Cluster_5038	Pocillopora_meandrina_HIv1___Sc0000019	5514558	5514964	407	86	24	0.046511627906976744	-	UAUUAUCGAUAUAGAUUUCCAUUGAAGU	37	2	81	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5515544-5516386	Cluster_5039	Pocillopora_meandrina_HIv1___Sc0000019	5515544	5516386	843	4674	512	0.006418485237483954	-	UGAACUGUUGAACCACAAGUGAAGAUAC	421	115	4370	26	118	27	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5518101-5518533	Cluster_5040	Pocillopora_meandrina_HIv1___Sc0000019	5518101	5518533	433	303	119	0.009900990099009901	-	UCACAUGUAAACACCUUGCCAUUAUCGAUC	67	7	284	1	6	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5519625-5520293	Cluster_5041	Pocillopora_meandrina_HIv1___Sc0000019	5519625	5520293	669	798	180	0.02631578947368421	-	UCGACGUCGAUAUCAACAUUCUUAAUGU	246	4	776	3	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5528716-5529214	Cluster_5042	Pocillopora_meandrina_HIv1___Sc0000019	5528716	5529214	499	211	73	0.004739336492890996	-	UGGGCGAUUUGCAAUUCAUGGAAAAAUGU	43	3	205	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5530160-5530595	Cluster_5043	Pocillopora_meandrina_HIv1___Sc0000019	5530160	5530595	436	230	73	0.3217391304347826	.	AAGCUCUUUAAGAUCAUUGAACA	40	3	162	0	8	45	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5531747-5532717	Cluster_5044	Pocillopora_meandrina_HIv1___Sc0000019	5531747	5532717	971	857	182	0.002333722287047841	-	UGAGCAAUGAAUUCUUCAAACACAAAACAGA	197	11	829	3	5	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5537318-5538414	Cluster_5045	Pocillopora_meandrina_HIv1___Sc0000019	5537318	5538414	1097	697	301	0.1133428981348637	-	UCGGCUUUGAUUCCUGGCAGCUUAUCAA	76	14	619	4	3	9	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5538438-5538865	Cluster_5046	Pocillopora_meandrina_HIv1___Sc0000019	5538438	5538865	428	320	121	0.084375	-	UACUUUGACAAGAACUAUAGGAUGGCAA	54	5	296	2	5	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5538980-5539390	Cluster_5047	Pocillopora_meandrina_HIv1___Sc0000019	5538980	5539390	411	161	80	0.16149068322981366	-	UCCAUUCUAUACAGCUCUUCACAAUCGUU	16	4	134	0	1	2	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5540318-5540983	Cluster_5048	Pocillopora_meandrina_HIv1___Sc0000019	5540318	5540983	666	489	130	0.05725971370143149	-	UCUUGUACGUUGCUUAGAAGAUUCAC	146	14	423	2	2	28	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5541815-5542236	Cluster_5049	Pocillopora_meandrina_HIv1___Sc0000019	5541815	5542236	422	133	63	0.007518796992481203	-	UAAAACGAUAUUGCUGACAGAAAAAUAACA	25	1	129	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5543716-5544953	Cluster_5050	Pocillopora_meandrina_HIv1___Sc0000019	5543716	5544953	1238	1038	288	0.022157996146435453	-	UGAACGACUCAAAAUCUCCACUGUUGAAAGG	202	3	1001	4	10	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5546262-5547320	Cluster_5051	Pocillopora_meandrina_HIv1___Sc0000019	5546262	5547320	1059	1979	667	0.1056088933804952	-	UACGCUGAAAUUUCUGCUUGGGU	126	55	1567	34	27	208	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5548045-5548474	Cluster_5052	Pocillopora_meandrina_HIv1___Sc0000019	5548045	5548474	430	127	53	0.0	-	UUGGUCUUCCUGUAAUGUGCUGAUUGUGGC	19	1	125	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5549965-5550394	Cluster_5053	Pocillopora_meandrina_HIv1___Sc0000019	5549965	5550394	430	179	46	0.0	-	UGGUUUCUGAAAUUUUGAAUGUGGAAGUUC	62	2	167	2	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5554945-5555364	Cluster_5054	Pocillopora_meandrina_HIv1___Sc0000019	5554945	5555364	420	453	84	0.0	-	AAAUCUUACACUCUUUGCCA	141	283	167	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5555767-5556175	Cluster_5055	Pocillopora_meandrina_HIv1___Sc0000019	5555767	5556175	409	198	86	0.0	-	UGAGUCCUCGUUUUAGCAGCAUGUACUGUU	26	3	188	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5556470-5556917	Cluster_5056	Pocillopora_meandrina_HIv1___Sc0000019	5556470	5556917	448	655	227	0.0	-	UGUCCAGGUCUAGUUGUUCUCCUUCGAUU	68	6	629	3	5	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5558976-5559395	Cluster_5057	Pocillopora_meandrina_HIv1___Sc0000019	5558976	5559395	420	186	98	0.10215053763440861	-	UUCUAAAGCUAGAGAACUGACUCAACUUC	10	8	150	5	1	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5562928-5565476	Cluster_5058	Pocillopora_meandrina_HIv1___Sc0000019	5562928	5565476	2549	6479	2048	0.08041364408087667	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	267	85	5858	41	63	199	233	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5565540-5565954	Cluster_5059	Pocillopora_meandrina_HIv1___Sc0000019	5565540	5565954	415	123	80	0.04878048780487805	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	10	1	112	2	3	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5960840-5961269	Cluster_5060	Pocillopora_meandrina_HIv1___Sc0000019	5960840	5961269	430	180	89	0.06111111111111111	-	UCUGACUUGUAGACUUUGGUGAACUGCA	28	0	174	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6018847-6019274	Cluster_5061	Pocillopora_meandrina_HIv1___Sc0000019	6018847	6019274	428	191	88	0.041884816753926704	-	UCUGACUUGUAGACUUUGGUGAACUGCA	32	0	187	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6044301-6045174	Cluster_5062	Pocillopora_meandrina_HIv1___Sc0000019	6044301	6045174	874	573	299	0.9214659685863874	+	UGAUAACUGUACUCUUGAAAUUCAUCGAU	20	5	540	3	2	5	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6067663-6068288	Cluster_5063	Pocillopora_meandrina_HIv1___Sc0000019	6067663	6068288	626	506	175	0.039525691699604744	-	UCUGACUUGUAGACUUUGGUGAACUGCA	58	1	493	1	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6300765-6301190	Cluster_5064	Pocillopora_meandrina_HIv1___Sc0000019	6300765	6301190	426	95	26	0.010526315789473684	-	UCCGAUUUAAAAGAUUCUUUGUUUGUAGCA	20	0	94	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6301471-6302094	Cluster_5065	Pocillopora_meandrina_HIv1___Sc0000019	6301471	6302094	624	1649	233	0.007883565797453002	-	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	449	0	1638	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6393114-6393565	Cluster_5066	Pocillopora_meandrina_HIv1___Sc0000019	6393114	6393565	452	212	74	0.9669811320754716	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	40	2	205	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6393721-6396888	Cluster_5067	Pocillopora_meandrina_HIv1___Sc0000019	6393721	6396888	3168	5251	1715	0.9255379927632832	+	UGUACAACCAUCCGAUACUCUUGU	683	37	3896	26	23	128	1141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6397087-6398342	Cluster_5068	Pocillopora_meandrina_HIv1___Sc0000019	6397087	6398342	1256	1559	718	0.8832584990378448	+	UGAUCAGAUUCGUAACAGGCAAAGCAUA	55	52	1406	8	18	21	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6398638-6399065	Cluster_5069	Pocillopora_meandrina_HIv1___Sc0000019	6398638	6399065	428	338	180	0.7781065088757396	.	UGUUGUUCCAGGUAGUAUAAGCAAUCUGC	13	12	290	5	5	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6399204-6400375	Cluster_5070	Pocillopora_meandrina_HIv1___Sc0000019	6399204	6400375	1172	8375	1178	0.8807164179104477	+	UACAAUAACCUCUGAUUUCACUAAAUG	1623	32	7628	41	70	251	353	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6411186-6411617	Cluster_5071	Pocillopora_meandrina_HIv1___Sc0000019	6411186	6411617	432	532	123	0.022556390977443608	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	133	6	519	1	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6423927-6424355	Cluster_5072	Pocillopora_meandrina_HIv1___Sc0000019	6423927	6424355	429	87	21	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	0	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6434229-6434651	Cluster_5073	Pocillopora_meandrina_HIv1___Sc0000019	6434229	6434651	423	173	96	0.976878612716763	+	UGUAUUACUGGGCUGCCUAUCUUCAUUGGA	15	3	165	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6437833-6439058	Cluster_5074	Pocillopora_meandrina_HIv1___Sc0000019	6437833	6439058	1226	7462	1351	0.06151165907263468	-	UGUUUUGUUUCUGAUUAACCUUGUGU	602	65	7011	36	39	103	208	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6439915-6441043	Cluster_5075	Pocillopora_meandrina_HIv1___Sc0000019	6439915	6441043	1129	5289	808	0.9697485346946493	+	UGCUUGUAAUGUAAUAUCUCCUGGAGG	557	16	4993	23	28	114	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6441090-6441644	Cluster_5076	Pocillopora_meandrina_HIv1___Sc0000019	6441090	6441644	555	2943	379	0.9850492694529391	+	UAUAUCCUUUUAUUAAGGGUUUGGCGGUAG	1002	12	2885	1	3	14	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6446818-6447245	Cluster_5077	Pocillopora_meandrina_HIv1___Sc0000019	6446818	6447245	428	167	39	0.041916167664670656	-	UCAAAUCGAUUCUGAAUGUUCUCUUUUA	49	0	165	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6457181-6458370	Cluster_5078	Pocillopora_meandrina_HIv1___Sc0000019	6457181	6458370	1190	1362	377	0.8832599118942731	+	UCAUCUCUAUUAUUGGGUCGCUUGUAGU	253	6	1313	7	7	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6462929-6463922	Cluster_5079	Pocillopora_meandrina_HIv1___Sc0000019	6462929	6463922	994	7292	941	0.9637959407569939	+	UGUUCAACUCUUUCAAUGGCAGCUGUG	673	100	6894	32	54	91	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6490502-6491050	Cluster_5080	Pocillopora_meandrina_HIv1___Sc0000019	6490502	6491050	549	1754	222	0.010832383124287344	-	UGUUCAAAAUUAUCGUCUACGUAUGUGU	127	4	1671	4	13	3	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6653730-6654780	Cluster_5081	Pocillopora_meandrina_HIv1___Sc0000019	6653730	6654780	1051	754	366	0.7705570291777188	.	UGAUCAUAUAUUAUUCUAUCUGGAGA	32	9	703	3	6	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6655041-6655470	Cluster_5082	Pocillopora_meandrina_HIv1___Sc0000019	6655041	6655470	430	613	208	0.9119086460032626	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	72	5	522	2	5	12	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6676652-6677081	Cluster_5083	Pocillopora_meandrina_HIv1___Sc0000019	6676652	6677081	430	104	23	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	34	0	100	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6679746-6680158	Cluster_5084	Pocillopora_meandrina_HIv1___Sc0000019	6679746	6680158	413	204	127	0.8725490196078431	+	UACUGAUAGUGAAACUGCUCCUUGAACC	10	4	187	3	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6680180-6680610	Cluster_5085	Pocillopora_meandrina_HIv1___Sc0000019	6680180	6680610	431	292	124	0.9417808219178082	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	17	2	282	1	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:130515-130932	Cluster_5086	Pocillopora_meandrina_HIv1___Sc0000020	130515	130932	418	79	12	0.0	-	GCUGGCUGACUUUGGUGG	27	78	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:312650-314365	Cluster_5087	Pocillopora_meandrina_HIv1___Sc0000020	312650	314365	1716	4272	1354	0.10931647940074907	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	348	42	3938	32	42	67	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:314372-314799	Cluster_5088	Pocillopora_meandrina_HIv1___Sc0000020	314372	314799	428	406	202	0.12315270935960591	-	UUGUCGUGAUCUUUCACUGCUUCUUGC	55	2	368	1	3	18	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:314917-315343	Cluster_5089	Pocillopora_meandrina_HIv1___Sc0000020	314917	315343	427	195	103	0.10256410256410256	-	UGAACUUCUCGGCUCCAAACACUAUGG	53	1	180	1	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:315359-315863	Cluster_5090	Pocillopora_meandrina_HIv1___Sc0000020	315359	315863	505	505	193	0.047524752475247525	-	UAAUUCCAUCUUGCGCUGAUAGCUCGU	57	4	474	5	3	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:316076-317295	Cluster_5091	Pocillopora_meandrina_HIv1___Sc0000020	316076	317295	1220	1211	473	0.0685383980181668	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	153	20	1097	2	16	23	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:324378-324812	Cluster_5092	Pocillopora_meandrina_HIv1___Sc0000020	324378	324812	435	175	63	0.03428571428571429	-	UGUAUUCUUUUAUAACUCUUAGGUUGUGAC	30	2	169	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:336427-336854	Cluster_5093	Pocillopora_meandrina_HIv1___Sc0000020	336427	336854	428	135	65	0.0	-	UGACGUGAAAGUUUCUGGACUUGUUUCGA	12	1	131	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:338038-338466	Cluster_5094	Pocillopora_meandrina_HIv1___Sc0000020	338038	338466	429	295	144	0.10508474576271186	-	UCGGAACAACGGUCGGUCUUCAGGCU	16	6	258	0	1	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:341599-342016	Cluster_5095	Pocillopora_meandrina_HIv1___Sc0000020	341599	342016	418	113	57	0.0	-	UGACGAUUUUCGCGGCUCGAUUUUGU	20	3	108	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:343975-344386	Cluster_5096	Pocillopora_meandrina_HIv1___Sc0000020	343975	344386	412	211	102	0.12796208530805686	-	UGGGAAAUUAUCUCUUGGACCUUUCGC	23	1	190	0	1	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:347036-347464	Cluster_5097	Pocillopora_meandrina_HIv1___Sc0000020	347036	347464	429	349	178	0.3123209169054441	.	UGUGAUUUCUUUGUCUGGCGAAUUUCUCC	33	8	318	3	4	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:351542-351968	Cluster_5098	Pocillopora_meandrina_HIv1___Sc0000020	351542	351968	427	228	118	0.0	-	UUAGAUCGUUCAUGGUUGCAUUCGUGA	23	2	224	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:361830-362341	Cluster_5099	Pocillopora_meandrina_HIv1___Sc0000020	361830	362341	512	1183	203	0.015215553677092139	-	UGAAACUGUUGCAUUUGAUUCUGUUGCUGC	307	1	1168	0	0	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:380637-381078	Cluster_5100	Pocillopora_meandrina_HIv1___Sc0000020	380637	381078	442	908	139	0.19383259911894274	-	UGAACUUGAACUAUUUGCUGGAGACGA	233	4	732	50	15	11	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:382358-382785	Cluster_5101	Pocillopora_meandrina_HIv1___Sc0000020	382358	382785	428	202	67	0.009900990099009901	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	30	3	195	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:395351-395775	Cluster_5102	Pocillopora_meandrina_HIv1___Sc0000020	395351	395775	425	149	54	0.6442953020134228	.	UUGUCUUGUCAAACAGACCCUGGAGAUA	14	1	121	0	1	1	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:775334-775929	Cluster_5103	Pocillopora_meandrina_HIv1___Sc0000020	775334	775929	596	588	255	0.06802721088435375	-	UUACCGGAGUGUUCUCUCGACGCAGUUUC	33	3	550	0	3	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:775949-776378	Cluster_5104	Pocillopora_meandrina_HIv1___Sc0000020	775949	776378	430	343	108	0.02040816326530612	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	50	0	330	1	4	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:857382-857811	Cluster_5105	Pocillopora_meandrina_HIv1___Sc0000020	857382	857811	430	322	50	0.0	-	ACAAAGAACGAAUUGAGCCGACUUCAUGAU	76	3	310	3	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:859608-860032	Cluster_5106	Pocillopora_meandrina_HIv1___Sc0000020	859608	860032	425	85	25	0.0	-	UGGUAGAGCCAGUGAGGAAGCAGCUAAAG	21	3	73	3	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:869363-870043	Cluster_5107	Pocillopora_meandrina_HIv1___Sc0000020	869363	870043	681	1457	174	0.05284831846259437	-	UUCUGCUAUAUUGUGAAAUAACCUCAACAUU	291	35	1371	7	14	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1050284-1050710	Cluster_5108	Pocillopora_meandrina_HIv1___Sc0000020	1050284	1050710	427	112	45	0.08035714285714286	-	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	24	0	109	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1057769-1058237	Cluster_5109	Pocillopora_meandrina_HIv1___Sc0000020	1057769	1058237	469	461	195	0.18004338394793926	-	UUCCUCAUCUGAAGACUCUUCUAGAAUC	33	13	425	5	12	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1058725-1060128	Cluster_5110	Pocillopora_meandrina_HIv1___Sc0000020	1058725	1060128	1404	10645	1523	0.038609675904180366	-	UGAAUCACUGUCAUCAAAACCAUGAAC	1226	93	10093	49	96	113	201	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1061581-1062330	Cluster_5111	Pocillopora_meandrina_HIv1___Sc0000020	1061581	1062330	750	6741	700	0.2772585669781931	.	UAAGAAGAGGAAAAUUUACAUGUUUGA	783	52	6098	16	19	459	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1142046-1142570	Cluster_5112	Pocillopora_meandrina_HIv1___Sc0000020	1142046	1142570	525	369	87	0.8346883468834688	+	UGACUUGAUUUUUUACGGCAUUUUGUAUC	178	6	326	2	11	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1162645-1163073	Cluster_5113	Pocillopora_meandrina_HIv1___Sc0000020	1162645	1163073	429	174	53	0.9942528735632183	+	UGUGCCAAAGAUUUAGAACGAAAGAACGA	50	1	169	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1409826-1410256	Cluster_5114	Pocillopora_meandrina_HIv1___Sc0000020	1409826	1410256	431	242	61	0.008264462809917356	-	UGUGUGACUUUGUAUGUAUAUUGAGCGU	37	0	239	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1424547-1424963	Cluster_5115	Pocillopora_meandrina_HIv1___Sc0000020	1424547	1424963	417	73	21	1.0	+	AGUUGGAAGAAAAUCAAGAGCCCGUG	17	4	63	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1665283-1665721	Cluster_5116	Pocillopora_meandrina_HIv1___Sc0000020	1665283	1665721	439	542	132	0.9649446494464945	+	UGCGAUUUCGUUCCUCGUCCUUGAUGA	73	0	524	0	2	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1806706-1807115	Cluster_5117	Pocillopora_meandrina_HIv1___Sc0000020	1806706	1807115	410	97	34	0.020618556701030927	-	UUUGACAACUUUUGACGA	53	66	13	5	6	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2018664-2019081	Cluster_5118	Pocillopora_meandrina_HIv1___Sc0000020	2018664	2019081	418	121	74	0.01652892561983471	-	GGAAGAACGAAAGCGUUAGACCUGACU	12	28	71	3	5	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2137330-2138663	Cluster_5119	Pocillopora_meandrina_HIv1___Sc0000020	2137330	2138663	1334	15520	2415	0.09632731958762887	-	UCGAAUGCAUAAGUUUACUGGGGCUUGACC	2020	87	14776	46	72	229	310	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2139966-2140397	Cluster_5120	Pocillopora_meandrina_HIv1___Sc0000020	2139966	2140397	432	670	113	0.9298507462686567	+	UGUAUCUAGCUCUCUCUGAACCACAGG	180	3	611	1	2	1	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2140982-2141636	Cluster_5121	Pocillopora_meandrina_HIv1___Sc0000020	2140982	2141636	655	3251	489	0.07167025530605968	-	UACGAUGUGAUGUCUGAUCUUGACCCCGAU	595	14	3052	4	18	64	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2154149-2157219	Cluster_5122	Pocillopora_meandrina_HIv1___Sc0000020	2154149	2157219	3071	6586	2176	0.013209839052535682	-	UGAGACUUAAUUUCACACUACAGGAAUUGU	217	78	6277	33	37	80	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2157969-2158803	Cluster_5123	Pocillopora_meandrina_HIv1___Sc0000020	2157969	2158803	835	966	404	0.002070393374741201	-	UGAUUAAGAUAAGUUCUCUCAUUGGGCAUU	31	31	891	11	13	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2159004-2159497	Cluster_5124	Pocillopora_meandrina_HIv1___Sc0000020	2159004	2159497	494	344	133	0.00872093023255814	-	UAAAGCUGUGUCCACUAUAUCUGAGUAUU	28	4	328	0	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2162622-2163356	Cluster_5125	Pocillopora_meandrina_HIv1___Sc0000020	2162622	2163356	735	4289	262	0.00559570995570063	-	UGUUCCGUUAAUGACAUAAACCUUAGUCCUU	820	16	4177	6	3	10	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2165991-2166419	Cluster_5126	Pocillopora_meandrina_HIv1___Sc0000020	2165991	2166419	429	287	101	0.0	-	UAAUCUUGUCUUCACUGAACUCUAGGCA	56	4	277	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2167227-2167640	Cluster_5127	Pocillopora_meandrina_HIv1___Sc0000020	2167227	2167640	414	208	98	0.0	-	UGUAAACUUCCGCAUCAGCUGUAUUUCAAC	23	6	197	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2167717-2168861	Cluster_5128	Pocillopora_meandrina_HIv1___Sc0000020	2167717	2168861	1145	747	218	0.008032128514056224	-	UGAGAUCUUUAACAUUGCUGAGAUGAUAU	128	14	716	1	6	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2171481-2173323	Cluster_5129	Pocillopora_meandrina_HIv1___Sc0000020	2171481	2173323	1843	10034	1734	0.14361172015148496	-	UACUUGUCGAAGUCCUGGCCCUCUAGCC	700	84	9182	40	132	196	400	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2180250-2180666	Cluster_5130	Pocillopora_meandrina_HIv1___Sc0000020	2180250	2180666	417	220	125	0.0	-	UGAAACGCAUCGUCACAUUGUAUAACUGA	14	0	218	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2183526-2183955	Cluster_5131	Pocillopora_meandrina_HIv1___Sc0000020	2183526	2183955	430	179	71	0.0	-	UCCGAUCAAAGAAACAUCAAAGUGCUCGC	22	0	174	4	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2184196-2185184	Cluster_5132	Pocillopora_meandrina_HIv1___Sc0000020	2184196	2185184	989	1131	617	0.011494252873563218	-	CAUGUCUAAGUAUAAGCACU	44	488	328	99	86	74	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2187009-2187437	Cluster_5133	Pocillopora_meandrina_HIv1___Sc0000020	2187009	2187437	429	267	104	0.00749063670411985	-	UGUUGCUCUAAAUGUAUCUUUGAUGUAUA	42	1	262	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2187597-2188625	Cluster_5134	Pocillopora_meandrina_HIv1___Sc0000020	2187597	2188625	1029	1211	272	0.005780346820809248	-	UGUUAGAAAUUCCAGAAACUGCUUGUGUGC	282	7	1183	2	2	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2193899-2194735	Cluster_5135	Pocillopora_meandrina_HIv1___Sc0000020	2193899	2194735	837	6883	1316	0.0045038500653784685	-	CUUAGAUGUUCUGGGCCGCACGCGCGCUA	264	1974	3352	416	348	368	425	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2196736-2197517	Cluster_5136	Pocillopora_meandrina_HIv1___Sc0000020	2196736	2197517	782	587	339	0.0	-	UAGGAUCUGAUUUCAAUCCAUUUGCUGUC	30	3	558	5	3	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2197561-2199023	Cluster_5137	Pocillopora_meandrina_HIv1___Sc0000020	2197561	2199023	1463	4356	1037	0.009182736455463728	-	UACAAAGUCAUGUGCCACCUCUGCAACA	463	34	4234	7	7	30	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2199973-2200510	Cluster_5138	Pocillopora_meandrina_HIv1___Sc0000020	2199973	2200510	538	520	222	0.0	-	UCUUUUAGUAUCGCCAACUGUGGCUUCGGA	39	4	501	6	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2200810-2201288	Cluster_5139	Pocillopora_meandrina_HIv1___Sc0000020	2200810	2201288	479	1044	279	0.0009578544061302681	-	UGUUGUCAUAUUGUUUCUCCAUUCAUC	131	3	994	2	5	25	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2201494-2202081	Cluster_5140	Pocillopora_meandrina_HIv1___Sc0000020	2201494	2202081	588	337	188	0.0	-	UGAUUCUGGCUUAAGUGAAGUGACGCA	17	4	313	4	9	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2202498-2202922	Cluster_5141	Pocillopora_meandrina_HIv1___Sc0000020	2202498	2202922	425	137	70	0.0	-	UGCACUGUAUCGAUACCACUUAUAGGGAAA	23	0	133	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2203171-2204060	Cluster_5142	Pocillopora_meandrina_HIv1___Sc0000020	2203171	2204060	890	806	319	0.0	-	UGAUAUUAUACAGAUCUUCUGCCUGCAUAGC	93	17	765	11	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2204386-2206467	Cluster_5143	Pocillopora_meandrina_HIv1___Sc0000020	2204386	2206467	2082	16327	1905	0.050529797268328534	-	UCGGUAUAGCUUUCAAAACUGUUGUCACU	2346	422	14213	73	161	801	657	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2206824-2208628	Cluster_5144	Pocillopora_meandrina_HIv1___Sc0000020	2206824	2208628	1805	2898	990	0.0914423740510697	-	UAAACAACGCUCUGAUCGCCAUUAGGUU	100	28	2682	10	31	77	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2208662-2209312	Cluster_5145	Pocillopora_meandrina_HIv1___Sc0000020	2208662	2209312	651	1306	480	0.10719754977029096	-	UGCUUCUCAAUUUCGUCUGUUGUCAGGG	95	12	1198	8	6	35	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2210292-2210722	Cluster_5146	Pocillopora_meandrina_HIv1___Sc0000020	2210292	2210722	431	421	86	0.06413301662707839	-	UCUAUGCUAUUAUUCUGUUUCCGACACACU	99	1	417	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2213520-2214635	Cluster_5147	Pocillopora_meandrina_HIv1___Sc0000020	2213520	2214635	1116	1406	416	0.014935988620199146	-	UGACAAUCAUGCUGCUAAGUUCCUACGC	151	42	1321	2	16	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2215350-2215821	Cluster_5148	Pocillopora_meandrina_HIv1___Sc0000020	2215350	2215821	472	564	183	0.0	-	UAAUUUUGGAUGUGAGCUUCCCGAUAGCC	51	5	548	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2215844-2216273	Cluster_5149	Pocillopora_meandrina_HIv1___Sc0000020	2215844	2216273	430	320	131	0.0	-	UUGUGUCACUAACAAGGGACCUAGAAGAGU	49	2	314	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2218309-2218724	Cluster_5150	Pocillopora_meandrina_HIv1___Sc0000020	2218309	2218724	416	164	80	0.07317073170731707	-	UGUAUUAUUCUGUACCUUCUUCUUGAUAGA	37	12	152	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2219673-2220100	Cluster_5151	Pocillopora_meandrina_HIv1___Sc0000020	2219673	2220100	428	86	31	0.011627906976744186	-	UGACUUAACUGAACUUUCACCUGCAGUGGA	42	0	81	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2222506-2223394	Cluster_5152	Pocillopora_meandrina_HIv1___Sc0000020	2222506	2223394	889	3870	605	0.2801033591731266	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	766	92	3216	40	25	118	379	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2223405-2224021	Cluster_5153	Pocillopora_meandrina_HIv1___Sc0000020	2223405	2224021	617	2463	343	0.11855460820138043	-	UUACAUGAUUUUUAUAGGAGCUGAAUAA	821	6	2328	3	8	23	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2247886-2248414	Cluster_5154	Pocillopora_meandrina_HIv1___Sc0000020	2247886	2248414	529	919	203	0.4504896626768226	.	UGGGUUCUCGAUCACGUCUAAAUACACG	86	12	866	4	6	16	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2257511-2258054	Cluster_5155	Pocillopora_meandrina_HIv1___Sc0000020	2257511	2258054	544	530	125	0.045283018867924525	-	UGAAUAACCACUGAGACGUUCGGUAGA	48	19	487	5	3	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2259509-2259911	Cluster_5156	Pocillopora_meandrina_HIv1___Sc0000020	2259509	2259911	403	218	145	0.38990825688073394	.	AAUUAACGCAGCAUCCGAGAUCUUUCAGA	8	4	198	1	6	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2259957-2262435	Cluster_5157	Pocillopora_meandrina_HIv1___Sc0000020	2259957	2262435	2479	8220	1059	0.048418491484184915	-	UGAGACGAAACCCGACUACAGAAUAGCU	1571	22	7793	19	31	49	306	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2339084-2339501	Cluster_5158	Pocillopora_meandrina_HIv1___Sc0000020	2339084	2339501	418	162	14	0.024691358024691357	-	CGGCCUGAAAAAAAAAAA	126	156	3	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2449892-2450316	Cluster_5159	Pocillopora_meandrina_HIv1___Sc0000020	2449892	2450316	425	166	80	0.006024096385542169	-	GACGGUGUAUGCCUCUGAUGGUUGUA	18	36	90	7	12	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2454190-2454610	Cluster_5160	Pocillopora_meandrina_HIv1___Sc0000020	2454190	2454610	421	125	23	0.0	-	UCCAGCACCAAUGUUAUUGUUA	40	9	1	53	51	11	0	21	N	spi-mir-temp-26_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000020:2455027-2455511	Cluster_5161	Pocillopora_meandrina_HIv1___Sc0000020	2455027	2455511	485	681	184	0.0	-	CUAGCCCCGUGCUCCUGUAACAUUU	170	149	366	35	66	22	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2557825-2558240	Cluster_5162	Pocillopora_meandrina_HIv1___Sc0000020	2557825	2558240	416	87	9	1.0	+	GUUCUAUUUUGUUGGC	78	85	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2571080-2571510	Cluster_5163	Pocillopora_meandrina_HIv1___Sc0000020	2571080	2571510	431	11188	297	0.0003575259206292456	-	GGCCGUGAUCGUAUAGUGGUUAGUACAUU	4328	357	10727	16	9	19	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2582171-2582599	Cluster_5164	Pocillopora_meandrina_HIv1___Sc0000020	2582171	2582599	429	254	175	0.09448818897637795	-	GCACAUAUACUAAAAUUGGAACGAUACAGA	14	59	96	38	28	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2598846-2599327	Cluster_5165	Pocillopora_meandrina_HIv1___Sc0000020	2598846	2599327	482	2255	732	0.9729490022172949	+	UUGGAACGAUACAGAGAAGAUUAGCA	74	530	998	231	142	173	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2609484-2609983	Cluster_5166	Pocillopora_meandrina_HIv1___Sc0000020	2609484	2609983	500	9048	1562	0.009173297966401414	-	GCACAUAUACUAAAAUUGGAACGAUA	269	1539	4313	814	666	1044	672	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2623401-2623828	Cluster_5167	Pocillopora_meandrina_HIv1___Sc0000020	2623401	2623828	428	151	49	0.019867549668874173	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	47	1	143	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2642180-2642605	Cluster_5168	Pocillopora_meandrina_HIv1___Sc0000020	2642180	2642605	426	1311	89	0.996186117467582	+	GGCCGUGAUCGUAUAGUGG	738	948	185	21	16	27	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2644695-2645439	Cluster_5169	Pocillopora_meandrina_HIv1___Sc0000020	2644695	2645439	745	319	140	0.9467084639498433	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	53	2	312	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2645517-2645926	Cluster_5170	Pocillopora_meandrina_HIv1___Sc0000020	2645517	2645926	410	165	89	0.6181818181818182	.	ACUGGAUACAAAACUGCUCGAUGC	25	1	118	1	2	6	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2844026-2845066	Cluster_5171	Pocillopora_meandrina_HIv1___Sc0000020	2844026	2845066	1041	2517	510	0.35955502582439414	.	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	306	16	2366	10	12	27	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2848876-2849478	Cluster_5172	Pocillopora_meandrina_HIv1___Sc0000020	2848876	2849478	603	299	95	0.06020066889632107	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	71	2	276	0	0	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2873332-2873762	Cluster_5173	Pocillopora_meandrina_HIv1___Sc0000020	2873332	2873762	431	16469	395	0.9997571194365171	+	GGCCGUGAUCGUAUAGUGGUUAGUACAUU	5579	779	15518	24	14	32	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2989771-2990214	Cluster_5174	Pocillopora_meandrina_HIv1___Sc0000020	2989771	2990214	444	262	30	0.44656488549618323	.	UGUUUGAUUUUUACAGACUAGCGCUCUUAA	61	15	190	6	10	33	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3033990-3034545	Cluster_5175	Pocillopora_meandrina_HIv1___Sc0000020	3033990	3034545	556	612	223	0.09803921568627451	-	UCCGGUCAGAUUCUUUCCCACUAGCUC	49	14	545	0	9	12	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3036056-3036482	Cluster_5176	Pocillopora_meandrina_HIv1___Sc0000020	3036056	3036482	427	296	125	0.902027027027027	+	UUGGAACGUGUUGCUGAACGCUUGCU	45	15	256	7	7	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3038313-3038790	Cluster_5177	Pocillopora_meandrina_HIv1___Sc0000020	3038313	3038790	478	410	123	0.024390243902439025	-	UCAAUUGUUUACUUUCCUGGCAGGUUGCC	70	4	383	8	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3257820-3258260	Cluster_5178	Pocillopora_meandrina_HIv1___Sc0000020	3257820	3258260	441	1180	155	0.9779661016949153	+	UCUUCCACUGAUCGUUGAGUUGAAGACUA	210	17	1009	27	23	30	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3808509-3808933	Cluster_5179	Pocillopora_meandrina_HIv1___Sc0000020	3808509	3808933	425	150	41	0.0	-	AAGGAAAAGAUCUGAAUCACCGAAUGGUUU	44	1	143	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3891312-3891737	Cluster_5180	Pocillopora_meandrina_HIv1___Sc0000020	3891312	3891737	426	110	28	0.9090909090909091	+	AUAGAUCCAAAAGGUAAAAUUCCAGAA	28	5	102	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4052858-4053283	Cluster_5181	Pocillopora_meandrina_HIv1___Sc0000020	4052858	4053283	426	180	57	0.9555555555555556	+	UUUGUUAGGAGAGUCUGCAACUAAGC	28	1	172	0	4	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4152005-4152430	Cluster_5182	Pocillopora_meandrina_HIv1___Sc0000020	4152005	4152430	426	101	28	0.9702970297029703	+	UGUGUAGAUAUGUCUUUUGGACAGGA	32	0	100	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4152989-4153419	Cluster_5183	Pocillopora_meandrina_HIv1___Sc0000020	4152989	4153419	431	611	176	0.9787234042553191	+	UGACUGACUGUGCUUGUGUACGAUACA	87	3	596	1	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4269388-4269816	Cluster_5184	Pocillopora_meandrina_HIv1___Sc0000020	4269388	4269816	429	279	111	0.7956989247311828	.	UGACUAUUCAACAGCUGUUCUUCUACCG	40	3	256	5	1	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4295668-4296095	Cluster_5185	Pocillopora_meandrina_HIv1___Sc0000020	4295668	4296095	428	147	44	0.006802721088435374	-	UGUGCCAAAGAUUUAGAACGAAAGAACGA	36	0	141	2	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4304724-4305153	Cluster_5186	Pocillopora_meandrina_HIv1___Sc0000020	4304724	4305153	430	209	78	0.9904306220095693	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	78	2	206	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4385019-4385501	Cluster_5187	Pocillopora_meandrina_HIv1___Sc0000020	4385019	4385501	483	682	135	0.9340175953079178	+	UGUUUCAAAGAAAGUCACCAAGGCCAAGA	178	4	662	2	4	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4408578-4409007	Cluster_5188	Pocillopora_meandrina_HIv1___Sc0000020	4408578	4409007	430	189	47	0.005291005291005291	-	UGUGCCAAAGAUUUAGAACGAAAGAACGA	48	0	187	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4625044-4625487	Cluster_5189	Pocillopora_meandrina_HIv1___Sc0000020	4625044	4625487	444	254	131	0.0	-	ACCAGUCGCUGAAUUCGGGUACUGUAGACU	14	73	110	23	13	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4921931-4922354	Cluster_5190	Pocillopora_meandrina_HIv1___Sc0000020	4921931	4922354	424	108	23	1.0	+	UACCGUAGAACUUUCCAGAACAUU	52	8	27	2	1	2	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5066931-5067527	Cluster_5191	Pocillopora_meandrina_HIv1___Sc0000020	5066931	5067527	597	5720	505	0.9963286713286713	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	829	10	5662	2	6	14	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5120302-5120732	Cluster_5192	Pocillopora_meandrina_HIv1___Sc0000020	5120302	5120732	431	2464	188	0.014204545454545454	-	UUCGAAGAAACUCUUGCCAUCGCCUGGA	829	1	2405	0	5	2	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5121680-5122107	Cluster_5193	Pocillopora_meandrina_HIv1___Sc0000020	5121680	5122107	428	91	6	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	57	0	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5222988-5223470	Cluster_5194	Pocillopora_meandrina_HIv1___Sc0000020	5222988	5223470	483	1053	173	0.9924026590693258	+	AAUGGGAAAACGAGAACAGCGUGA	94	29	640	23	16	135	210	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5315836-5316254	Cluster_5195	Pocillopora_meandrina_HIv1___Sc0000020	5315836	5316254	419	156	29	0.8141025641025641	+	AUAUGAGAUUAUGAAAGUA	94	133	13	3	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5453827-5454256	Cluster_5196	Pocillopora_meandrina_HIv1___Sc0000020	5453827	5454256	430	1289	56	0.9992242048099301	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUG	1037	0	1289	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5490480-5490905	Cluster_5197	Pocillopora_meandrina_HIv1___Sc0000020	5490480	5490905	426	243	116	0.7942386831275721	.	GUGGAGUUAAAAGUAGGGACAACAGUUGA	12	14	166	8	5	24	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5542041-5542469	Cluster_5198	Pocillopora_meandrina_HIv1___Sc0000020	5542041	5542469	429	392	56	0.007653061224489796	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	280	1	383	0	3	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5542610-5543037	Cluster_5199	Pocillopora_meandrina_HIv1___Sc0000020	5542610	5543037	428	204	103	0.37745098039215685	.	UUUUGCUCUUUAUCGGGUGUCUGGACCAU	20	0	188	1	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5600501-5601310	Cluster_5200	Pocillopora_meandrina_HIv1___Sc0000020	5600501	5601310	810	155276	1027	0.9936886576161158	+	UUCUGCUGAACUACUUUGAGAACGAGU	77162	858	151528	95	90	242	2463	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5780162-5780592	Cluster_5201	Pocillopora_meandrina_HIv1___Sc0000020	5780162	5780592	431	767	75	0.9921773142112125	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	241	0	763	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5821891-5822342	Cluster_5202	Pocillopora_meandrina_HIv1___Sc0000020	5821891	5822342	452	560	62	0.8571428571428571	+	AGUGACAAGAUUUUUCCUGAUGUA	204	5	58	5	46	210	236	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5914229-5914657	Cluster_5203	Pocillopora_meandrina_HIv1___Sc0000020	5914229	5914657	429	111	21	0.9819819819819819	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	42	1	110	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5915276-5915701	Cluster_5204	Pocillopora_meandrina_HIv1___Sc0000020	5915276	5915701	426	182	95	0.9835164835164835	+	UGGGAAAACGAGAACAGCGUGAGUGUUU	14	1	142	4	2	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5931892-5932319	Cluster_5205	Pocillopora_meandrina_HIv1___Sc0000020	5931892	5932319	428	178	61	0.033707865168539325	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	56	2	167	2	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5977080-5978730	Cluster_5206	Pocillopora_meandrina_HIv1___Sc0000020	5977080	5978730	1651	1498	651	0.11348464619492657	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	75	13	1417	2	3	18	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5979221-5979648	Cluster_5207	Pocillopora_meandrina_HIv1___Sc0000020	5979221	5979648	428	142	52	0.056338028169014086	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	61	1	135	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5979732-5980209	Cluster_5208	Pocillopora_meandrina_HIv1___Sc0000020	5979732	5980209	478	351	147	0.07977207977207977	-	UCCAAUCACACACAGUUCUCCUGCGGC	78	1	336	1	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5980533-5980960	Cluster_5209	Pocillopora_meandrina_HIv1___Sc0000020	5980533	5980960	428	234	122	0.042735042735042736	-	UGUUACCGGUCUUGCUAACCACUUGGA	19	2	222	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5981190-5981602	Cluster_5210	Pocillopora_meandrina_HIv1___Sc0000020	5981190	5981602	413	194	103	0.0979381443298969	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	25	2	182	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6091599-6092028	Cluster_5211	Pocillopora_meandrina_HIv1___Sc0000020	6091599	6092028	430	406	39	0.9753694581280788	+	CGAAGAUGGAAUCAAUAAAUGCAGAACAGG	175	2	352	4	48	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6480082-6480500	Cluster_5212	Pocillopora_meandrina_HIv1___Sc0000020	6480082	6480500	419	87	9	0.0	-	UUUGACAACUUUUGACGGA	55	87	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6703789-6704212	Cluster_5213	Pocillopora_meandrina_HIv1___Sc0000020	6703789	6704212	424	133	54	1.0	+	GACGGAUUGAGGAAGCA	14	32	59	4	8	2	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:193763-194190	Cluster_5214	Pocillopora_meandrina_HIv1___Sc0000021	193763	194190	428	99	16	0.010101010101010102	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	42	0	98	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:324463-324937	Cluster_5215	Pocillopora_meandrina_HIv1___Sc0000021	324463	324937	475	44508	2117	0.9985171205176597	+	GAGGUCCGGACGGUGGAGGGUUAUCCACU	5180	7550	31534	2213	1553	895	763	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:326001-326467	Cluster_5216	Pocillopora_meandrina_HIv1___Sc0000021	326001	326467	467	2668	400	0.9966266866566716	+	AUACCCUUCUCAUAACUUGACUUCCU	268	240	1897	101	181	107	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:326663-327132	Cluster_5217	Pocillopora_meandrina_HIv1___Sc0000021	326663	327132	470	233394	3575	0.9995715399710361	+	GAGGUCCGGACGGCUGAGGGUUAUCUCACA	48709	19138	179964	10312	12805	6997	4178	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:593498-593930	Cluster_5218	Pocillopora_meandrina_HIv1___Sc0000021	593498	593930	433	248	190	1.0	+	CCGCUCGGAGUGCCUGAUGAAAAGACA	5	58	100	28	24	9	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:596199-596601	Cluster_5219	Pocillopora_meandrina_HIv1___Sc0000021	596199	596601	403	148	128	1.0	+	GUAGGGUUGUAAACGAUACAGCGGAGUGCA	3	25	81	10	10	16	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:608439-608851	Cluster_5220	Pocillopora_meandrina_HIv1___Sc0000021	608439	608851	413	188	143	1.0	+	UCUGGAAGCAUUGGGCGGAGCAACUGGGG	5	34	98	18	13	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:608944-609366	Cluster_5221	Pocillopora_meandrina_HIv1___Sc0000021	608944	609366	423	209	153	1.0	+	UGCGGUAGAAAUACGGAAGAGACU	6	29	94	22	14	19	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:758132-758551	Cluster_5222	Pocillopora_meandrina_HIv1___Sc0000021	758132	758551	420	939	49	1.0	+	CCCGGGUCUCGGCACCAU	388	939	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:784913-785341	Cluster_5223	Pocillopora_meandrina_HIv1___Sc0000021	784913	785341	429	141	38	0.0	-	UAAGCAACAUGGGAGCUAUGGUAUUCUUG	55	3	120	3	10	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:896386-896814	Cluster_5224	Pocillopora_meandrina_HIv1___Sc0000021	896386	896814	429	539	71	0.02411873840445269	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	320	5	529	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:975531-975948	Cluster_5225	Pocillopora_meandrina_HIv1___Sc0000021	975531	975948	418	233	143	0.0	-	AGCCGGUUUUAGGAAUGUUA	9	64	68	35	26	26	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1005509-1005931	Cluster_5226	Pocillopora_meandrina_HIv1___Sc0000021	1005509	1005931	423	250	136	0.0	-	AAAAAGAAUGGGACUGUCUGUAAUA	25	57	98	14	17	43	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1065156-1065872	Cluster_5227	Pocillopora_meandrina_HIv1___Sc0000021	1065156	1065872	717	377	203	0.07692307692307693	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	23	4	347	4	2	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1068005-1068589	Cluster_5228	Pocillopora_meandrina_HIv1___Sc0000021	1068005	1068589	585	936	299	0.06517094017094018	-	UGUACUAAUCUUUCCGCCUGACCAUUGGUU	123	8	883	4	11	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1068665-1069095	Cluster_5229	Pocillopora_meandrina_HIv1___Sc0000021	1068665	1069095	431	630	155	0.007936507936507936	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	129	3	621	3	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1499718-1500140	Cluster_5230	Pocillopora_meandrina_HIv1___Sc0000021	1499718	1500140	423	1230	55	1.0	+	UGUGAUUGGAGACUUUUAUCGU	690	33	1	8	1111	64	13	22	N	spi-mir-temp-20_Stylophora_pistillata_Liew_et_al._2014_NA;apa-mir-2037_Exaiptasia_pallida_Baumgarten_et_al._2017_miR-2037;_Nve;_Spis;eca-nve-F-miR-2037_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;mse-nve-F-miR-2037-3p_Metridium_senile_Praher_et_al._2021_Transcriptome-level;sca-nve-F-miR-2037-3p_Scolanthus_callimorphus_Praher_et_al._2021_Transcriptome-level;ami-nve-F-miR-2037-3p_Acropora_millepora_Praher_et_al._2021_NA;spi-nve-F-miR-2037_Stylophora_pistillata_Praher_et_al._2021_NA;avi-miR-temp-2037_Anemonia_viridis_Urbarova_et_al._2018_NA
Pocillopora_meandrina_HIv1___Sc0000021:1662373-1662790	Cluster_5231	Pocillopora_meandrina_HIv1___Sc0000021	1662373	1662790	418	114	41	0.9210526315789473	+	UGCUUUGGACGAAAUUUCGAGGUUCACACC	18	8	98	2	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1663270-1663727	Cluster_5232	Pocillopora_meandrina_HIv1___Sc0000021	1663270	1663727	458	5200	155	0.012692307692307692	-	UGCAUUGUGUUUGCUUCCAGACUUGACUU	1196	68	5071	2	14	26	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1663833-1664360	Cluster_5233	Pocillopora_meandrina_HIv1___Sc0000021	1663833	1664360	528	1318	171	0.9226100151745068	+	AUUUUAAUCAUGUUGGGACUUAAAGGUG	308	12	1209	2	15	49	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1708235-1708676	Cluster_5234	Pocillopora_meandrina_HIv1___Sc0000021	1708235	1708676	442	190	52	0.5789473684210527	.	UACCAUAGAUCUCUCCAAAGCAUUUGACU	33	4	181	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1803561-1803988	Cluster_5235	Pocillopora_meandrina_HIv1___Sc0000021	1803561	1803988	428	169	55	0.9408284023668639	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	26	1	166	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1805532-1805954	Cluster_5236	Pocillopora_meandrina_HIv1___Sc0000021	1805532	1805954	423	161	11	0.0	-	UUUAGAUUGUGUAAGUAGUGUGA	88	9	1	13	36	91	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1807854-1808415	Cluster_5237	Pocillopora_meandrina_HIv1___Sc0000021	1807854	1808415	562	1099	254	0.5696087352138307	.	AAAAGAACGAAGACGCUGCCAAGA	65	58	862	39	15	25	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1810323-1810759	Cluster_5238	Pocillopora_meandrina_HIv1___Sc0000021	1810323	1810759	437	982	135	0.9633401221995926	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	414	17	938	18	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1814973-1815409	Cluster_5239	Pocillopora_meandrina_HIv1___Sc0000021	1814973	1815409	437	831	137	0.8002406738868832	+	UCAAGCUCUUCCUGACACCUGUUGUGU	238	9	753	6	9	10	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1823807-1824425	Cluster_5240	Pocillopora_meandrina_HIv1___Sc0000021	1823807	1824425	619	563	131	0.6181172291296625	.	AAGGAUACCACAUUCGGAAGUGUAAGAGA	122	12	486	9	4	30	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2036658-2037086	Cluster_5241	Pocillopora_meandrina_HIv1___Sc0000021	2036658	2037086	429	166	8	0.006024096385542169	-	UAACGAGAUUAAAAUGGCAAUGAACAAUA	108	2	163	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2067953-2068642	Cluster_5242	Pocillopora_meandrina_HIv1___Sc0000021	2067953	2068642	690	1354	325	0.4527326440177253	.	GUACUCGAUAUUGUCUGGAAUUCUGCCA	314	6	1290	4	16	15	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2342535-2343348	Cluster_5243	Pocillopora_meandrina_HIv1___Sc0000021	2342535	2343348	814	426	242	0.06807511737089202	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	17	2	400	5	4	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2362599-2363026	Cluster_5244	Pocillopora_meandrina_HIv1___Sc0000021	2362599	2363026	428	130	57	0.14615384615384616	-	UGUGUUAACGUUUCACGGACAAGCUACCGA	47	12	105	2	5	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2484436-2485055	Cluster_5245	Pocillopora_meandrina_HIv1___Sc0000021	2484436	2485055	620	726	146	0.571625344352617	.	UGAAGAAUUCACAGUUACUUACUUUAGAUA	94	6	703	3	0	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2487317-2487747	Cluster_5246	Pocillopora_meandrina_HIv1___Sc0000021	2487317	2487747	431	822	130	0.0036496350364963502	-	CAACAAAUCAAACUUGGAGGCUCUUCA	106	1	777	9	2	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2598247-2598676	Cluster_5247	Pocillopora_meandrina_HIv1___Sc0000021	2598247	2598676	430	593	139	0.984822934232715	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	126	0	585	1	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2598797-2599326	Cluster_5248	Pocillopora_meandrina_HIv1___Sc0000021	2598797	2599326	530	549	219	0.9963570127504554	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	38	1	535	5	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2601469-2601896	Cluster_5249	Pocillopora_meandrina_HIv1___Sc0000021	2601469	2601896	428	142	58	0.9788732394366197	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	32	1	139	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2602529-2602956	Cluster_5250	Pocillopora_meandrina_HIv1___Sc0000021	2602529	2602956	428	75	21	1.0	+	GAGCUUAUAACGUUAGCUGCACUGCAGGCU	23	2	71	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2907106-2907527	Cluster_5251	Pocillopora_meandrina_HIv1___Sc0000021	2907106	2907527	422	139	27	0.0	-	CGGGCUGUGAAAUAUCUUUA	39	44	37	8	17	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2924427-2924957	Cluster_5252	Pocillopora_meandrina_HIv1___Sc0000021	2924427	2924957	531	1193	325	1.0	+	AGUUGAUGAUGAUAAACACUGCGC	288	91	341	59	48	169	485	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3151853-3152286	Cluster_5253	Pocillopora_meandrina_HIv1___Sc0000021	3151853	3152286	434	323	87	0.9814241486068112	+	UGUACAUUCUCCCGAUCGCAGGACAGCU	41	0	318	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3254633-3255044	Cluster_5254	Pocillopora_meandrina_HIv1___Sc0000021	3254633	3255044	412	195	87	0.9897435897435898	+	UACGUAGACAUGAUACCC	25	44	143	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3261369-3262002	Cluster_5255	Pocillopora_meandrina_HIv1___Sc0000021	3261369	3262002	634	2079	270	0.012025012025012025	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	475	2	2041	2	6	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3399015-3399445	Cluster_5256	Pocillopora_meandrina_HIv1___Sc0000021	3399015	3399445	431	822	102	0.0036496350364963502	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	360	18	782	8	9	1	4	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3402070-3402499	Cluster_5257	Pocillopora_meandrina_HIv1___Sc0000021	3402070	3402499	430	126	33	0.007936507936507936	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	50	5	117	1	3	0	0	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3403523-3403994	Cluster_5258	Pocillopora_meandrina_HIv1___Sc0000021	3403523	3403994	472	123242	1508	9.736940328784018e-05	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	28213	9551	106621	3106	1835	830	1299	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3404649-3405074	Cluster_5259	Pocillopora_meandrina_HIv1___Sc0000021	3404649	3405074	426	82	25	0.012195121951219513	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	33	3	79	0	0	0	0	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3412626-3413045	Cluster_5260	Pocillopora_meandrina_HIv1___Sc0000021	3412626	3413045	420	245	134	0.27755102040816326	.	UCCUGACAUGAUUCUUUGAGUUCUUUCAA	12	3	215	2	1	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3413092-3413514	Cluster_5261	Pocillopora_meandrina_HIv1___Sc0000021	3413092	3413514	423	138	62	0.7681159420289855	.	UAUGCAUUCAAUGAUCGUGGUCGG	30	2	62	3	1	13	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3414488-3414911	Cluster_5262	Pocillopora_meandrina_HIv1___Sc0000021	3414488	3414911	424	119	40	0.2773109243697479	.	UGUUACAAAACCAUUAGAACUAUCAGUU	30	2	92	0	2	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3414923-3415458	Cluster_5263	Pocillopora_meandrina_HIv1___Sc0000021	3414923	3415458	536	182	77	0.08791208791208792	-	UGCAUGUGCUUUGUCUUGGAUUUCAU	17	3	173	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3418513-3419451	Cluster_5264	Pocillopora_meandrina_HIv1___Sc0000021	3418513	3419451	939	11652	889	0.0025746652935118436	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	1212	905	9809	328	229	177	204	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA;spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3422717-3423187	Cluster_5265	Pocillopora_meandrina_HIv1___Sc0000021	3422717	3423187	471	18305	753	0.0004370390603660202	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	2960	1638	15010	679	463	278	237	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3426420-3426907	Cluster_5266	Pocillopora_meandrina_HIv1___Sc0000021	3426420	3426907	488	1422	370	0.990857946554149	+	CUCCCCUCUUCCACUCACUUGACCUCCU	105	246	921	83	83	55	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3428560-3429035	Cluster_5267	Pocillopora_meandrina_HIv1___Sc0000021	3428560	3429035	476	30924	775	0.0033954210322079937	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	6291	2347	26213	906	708	400	350	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3460874-3461358	Cluster_5268	Pocillopora_meandrina_HIv1___Sc0000021	3460874	3461358	485	217	64	0.9539170506912442	+	GAGGUCCGGAUGGUUGAGGGUUAUCAAAUC	33	30	174	8	1	2	2	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3462997-3463468	Cluster_5269	Pocillopora_meandrina_HIv1___Sc0000021	3462997	3463468	472	8262	682	0.0033890099249576375	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	971	717	6784	291	229	139	102	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:4157525-4157953	Cluster_5270	Pocillopora_meandrina_HIv1___Sc0000021	4157525	4157953	429	207	96	0.5990338164251208	.	CUUCCAAUCAAAGUGCGUUGUGAUCGUG	12	15	184	4	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4236543-4236968	Cluster_5271	Pocillopora_meandrina_HIv1___Sc0000021	4236543	4236968	426	114	42	0.9824561403508771	+	UGUGUAGAUAUGUCUUUUGGACAGGA	34	1	112	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4328885-4329595	Cluster_5272	Pocillopora_meandrina_HIv1___Sc0000021	4328885	4329595	711	1211	315	0.833195706028076	+	UUCGGCAAAAACUAAAAGCGGGCGAAGA	294	8	1113	5	8	15	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4351817-4351909	Cluster_5273	Pocillopora_meandrina_HIv1___Sc0000021	4351817	4351909	93	163	39	1.0	+	ACUGAUAUUCACCAAGUG	34	72	4	45	26	13	3	N	Y	spi-mir-temp-34_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:4582089-4582510	Cluster_5274	Pocillopora_meandrina_HIv1___Sc0000021	4582089	4582510	422	141	29	0.07092198581560284	-	UGGGCUGAAAUCAUACACGUG	34	5	10	47	30	33	16	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4665570-4665991	Cluster_5275	Pocillopora_meandrina_HIv1___Sc0000021	4665570	4665991	422	201	57	0.024875621890547265	-	UCGAAUCCCACUUCUGACACCA	98	72	4	22	102	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4684925-4685354	Cluster_5276	Pocillopora_meandrina_HIv1___Sc0000021	4684925	4685354	430	97	25	0.9896907216494846	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	1	95	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4711499-4711914	Cluster_5277	Pocillopora_meandrina_HIv1___Sc0000021	4711499	4711914	416	120	43	0.3416666666666667	.	GUGGUGGACUGCUUGCAAU	22	92	21	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4905508-4906190	Cluster_5278	Pocillopora_meandrina_HIv1___Sc0000021	4905508	4906190	683	4366	502	0.32340815391662847	.	GUAUCUUCGAAGCUGGAUUACUGUAAUGCC	311	9	4207	7	13	24	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5105603-5106129	Cluster_5279	Pocillopora_meandrina_HIv1___Sc0000021	5105603	5106129	527	763	133	0.40235910878112713	.	UAUUCUUAUCAUCUGCGUUUGGUCUACUGC	126	2	753	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5110514-5110942	Cluster_5280	Pocillopora_meandrina_HIv1___Sc0000021	5110514	5110942	429	207	4	1.0	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	186	0	207	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5129429-5129855	Cluster_5281	Pocillopora_meandrina_HIv1___Sc0000021	5129429	5129855	427	107	45	0.9065420560747663	+	UGAAACUCUGGUCUGAAAAUAUUUUUAAAAC	24	5	94	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5184497-5184901	Cluster_5282	Pocillopora_meandrina_HIv1___Sc0000021	5184497	5184901	405	81	40	1.0	+	AAUAUACUGAAGACAGAGAAGUCCUGCUC	19	10	62	1	4	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5199336-5199754	Cluster_5283	Pocillopora_meandrina_HIv1___Sc0000021	5199336	5199754	419	187	40	0.0053475935828877	-	CACCCCUUGUAGUAGUCAG	43	174	1	7	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5275554-5275969	Cluster_5284	Pocillopora_meandrina_HIv1___Sc0000021	5275554	5275969	416	220	111	0.9954545454545455	+	UAAAACUCUCUUCCUGUAACCUCAGCAGGUG	14	8	207	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5276833-5277938	Cluster_5285	Pocillopora_meandrina_HIv1___Sc0000021	5276833	5277938	1106	107909	2332	0.9999536646618911	+	UUCAUUCUAACAGACGCUUUGUAAAAUCCU	10030	233	105188	187	579	1551	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5278062-5278492	Cluster_5286	Pocillopora_meandrina_HIv1___Sc0000021	5278062	5278492	431	254	97	1.0	+	UUCUUUGACGUGUUACACCAUACAGAUGGUC	56	2	246	1	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5306354-5306783	Cluster_5287	Pocillopora_meandrina_HIv1___Sc0000021	5306354	5306783	430	1203	74	0.99833748960931	+	UUCGAAUGAAGCAAGGUGUUCCUGAACUU	614	5	1193	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5319271-5319710	Cluster_5288	Pocillopora_meandrina_HIv1___Sc0000021	5319271	5319710	440	465	131	1.0	+	GUUAGAAUGAAGAAGGGCGUUCCUUCACU	47	87	325	13	3	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5329303-5329729	Cluster_5289	Pocillopora_meandrina_HIv1___Sc0000021	5329303	5329729	427	112	63	1.0	+	UCGUUUCUUCUGGAAUCUCAAUUCUGUGGA	8	0	108	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5602206-5603069	Cluster_5290	Pocillopora_meandrina_HIv1___Sc0000021	5602206	5603069	864	2029	365	0.02464268112370626	-	UGGACGUACGCAUUCACGAUCUCGCUCGUU	144	5	1994	6	6	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5603857-5604284	Cluster_5291	Pocillopora_meandrina_HIv1___Sc0000021	5603857	5604284	428	242	90	0.08264462809917356	-	UGAAUUCUUCGUAAACGGUUUCCUGGUC	76	4	227	2	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5605710-5606138	Cluster_5292	Pocillopora_meandrina_HIv1___Sc0000021	5605710	5606138	429	182	68	0.12637362637362637	-	UUUGCUUGCCAGAUCCUUUAUCCAAUGAA	24	0	162	0	0	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5607117-5607544	Cluster_5293	Pocillopora_meandrina_HIv1___Sc0000021	5607117	5607544	428	179	52	0.027932960893854747	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	47	0	176	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5659494-5659922	Cluster_5294	Pocillopora_meandrina_HIv1___Sc0000021	5659494	5659922	429	240	60	1.0	+	AGAAGAUGGUUCAUACACUGUUGUUAUGA	74	13	204	7	9	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5770832-5771370	Cluster_5295	Pocillopora_meandrina_HIv1___Sc0000021	5770832	5771370	539	3421	574	1.0	+	CUAUGACUGGUCAUUUCAACUGUAACAUUG	484	247	1997	60	171	250	696	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5811526-5811954	Cluster_5296	Pocillopora_meandrina_HIv1___Sc0000021	5811526	5811954	429	258	133	1.0	+	UGGCAAAAUCUACGAGGUCCGACUCAUGAU	28	40	179	7	12	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5973936-5974361	Cluster_5297	Pocillopora_meandrina_HIv1___Sc0000021	5973936	5974361	426	105	39	0.01904761904761905	-	UGUGUAGAUAUGUCUUUUGGACAGGA	39	0	102	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6041010-6041436	Cluster_5298	Pocillopora_meandrina_HIv1___Sc0000021	6041010	6041436	427	171	67	0.9941520467836257	+	UGAUUGACGUACGGUAUUUGAGACGC	20	2	164	2	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6107460-6107961	Cluster_5299	Pocillopora_meandrina_HIv1___Sc0000021	6107460	6107961	502	517	137	0.0735009671179884	-	UGAAUGACUUCGUUUGUGCAUUGGUAGGC	88	0	504	2	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6116528-6116934	Cluster_5300	Pocillopora_meandrina_HIv1___Sc0000021	6116528	6116934	407	142	84	0.8943661971830986	+	UCAUCUUCAGCGGCUAUCGCAACUGU	11	1	127	0	5	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6138009-6138410	Cluster_5301	Pocillopora_meandrina_HIv1___Sc0000021	6138009	6138410	402	79	34	0.02531645569620253	-	UGAUUGUACAAAUAUCUUUUACUGCUGUA	15	1	75	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6157720-6158165	Cluster_5302	Pocillopora_meandrina_HIv1___Sc0000021	6157720	6158165	446	632	204	0.6582278481012658	.	UCACGGUAGUAGUGUUGUUCAAUAGAUU	91	10	474	6	15	91	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6160724-6161150	Cluster_5303	Pocillopora_meandrina_HIv1___Sc0000021	6160724	6161150	427	170	35	0.0	-	UGAUAUCAUCUUUAGCUCUUGAAAAUG	89	1	169	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6165598-6166346	Cluster_5304	Pocillopora_meandrina_HIv1___Sc0000021	6165598	6166346	749	753	264	0.0650730411686587	-	UUCAUGAUCGUUAUGCGAUAGCAGCAAC	53	5	670	4	0	8	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6166615-6167399	Cluster_5305	Pocillopora_meandrina_HIv1___Sc0000021	6166615	6167399	785	561	259	0.1140819964349376	-	UGGUUGAAUGAUGUUGUCGAGUAGAUU	54	5	483	3	29	19	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6171647-6172591	Cluster_5306	Pocillopora_meandrina_HIv1___Sc0000021	6171647	6172591	945	939	391	0.002129925452609159	-	UGCUUUCUCGAUGACUGCUUGUUGUGC	42	16	894	9	1	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6173344-6174077	Cluster_5307	Pocillopora_meandrina_HIv1___Sc0000021	6173344	6174077	734	478	185	0.0	-	UGAGUUUGUAGAAGCAAUUUGCCGUCUGC	91	2	465	1	4	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6181742-6182314	Cluster_5308	Pocillopora_meandrina_HIv1___Sc0000021	6181742	6182314	573	607	231	0.06589785831960461	-	UGUUUGUGGUAGACUUGUUUUUGACGUG	53	14	475	11	32	31	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6183967-6184395	Cluster_5309	Pocillopora_meandrina_HIv1___Sc0000021	6183967	6184395	429	460	129	0.030434782608695653	-	UGUAGAAUCAAUCUGUUACUAAGACACC	101	3	437	6	2	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6186532-6186960	Cluster_5310	Pocillopora_meandrina_HIv1___Sc0000021	6186532	6186960	429	279	160	0.17204301075268819	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	25	4	256	0	2	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6188190-6189044	Cluster_5311	Pocillopora_meandrina_HIv1___Sc0000021	6188190	6189044	855	582	299	0.09621993127147767	-	UGUAGUUUUUUUCUGUGUCUGUAAGUGC	34	5	551	2	4	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6192308-6193276	Cluster_5312	Pocillopora_meandrina_HIv1___Sc0000021	6192308	6193276	969	7268	744	0.04003852504127683	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	1786	33	7099	10	22	36	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6200869-6201444	Cluster_5313	Pocillopora_meandrina_HIv1___Sc0000021	6200869	6201444	576	434	193	0.002304147465437788	-	UUGGAACUAUUGGUGUACUAGCGCUCGAU	18	3	417	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6201989-6202417	Cluster_5314	Pocillopora_meandrina_HIv1___Sc0000021	6201989	6202417	429	505	81	0.0	-	UUGUAAACUUCUCGAACAUUGGCCUAUU	119	4	494	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6211840-6212267	Cluster_5315	Pocillopora_meandrina_HIv1___Sc0000021	6211840	6212267	428	165	78	0.0	-	UUAACGACUUCAAUGAUUGCUCUUUUGGC	15	1	163	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6214988-6215440	Cluster_5316	Pocillopora_meandrina_HIv1___Sc0000021	6214988	6215440	453	419	199	0.007159904534606206	-	UGUAUGUGAGCGGCCUUGACUUGGUUGUA	23	4	390	5	3	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6215616-6216857	Cluster_5317	Pocillopora_meandrina_HIv1___Sc0000021	6215616	6216857	1242	11210	1451	0.028278322925958964	-	UCUGACUGACUAACAGGAUAUCUGCUUC	739	43	10851	16	39	97	164	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6219623-6220590	Cluster_5318	Pocillopora_meandrina_HIv1___Sc0000021	6219623	6220590	968	28185	1351	0.0010998758204718822	-	UAUGUUGAAUGAGAACUGGAGACCUCGAUU	4472	457	26939	95	154	221	319	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6220618-6221308	Cluster_5319	Pocillopora_meandrina_HIv1___Sc0000021	6220618	6221308	691	522	117	0.013409961685823755	-	UAACGAGAUUAAAAUGGCAAUGAACAAUA	214	3	509	3	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6221535-6221964	Cluster_5320	Pocillopora_meandrina_HIv1___Sc0000021	6221535	6221964	430	417	132	0.0	-	UGCAUUGGCAUGUUUAACUUAAGUUUC	54	1	383	12	2	0	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6222052-6222481	Cluster_5321	Pocillopora_meandrina_HIv1___Sc0000021	6222052	6222481	430	770	133	0.0	-	UGUAUUCGGACAUUUGCAAUUCCACAGG	152	2	752	4	6	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6223462-6223892	Cluster_5322	Pocillopora_meandrina_HIv1___Sc0000021	6223462	6223892	431	228	88	0.02631578947368421	-	UGCAACAAGUUUGGUUUAUGGACAAAAUC	21	2	211	3	1	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6226710-6227744	Cluster_5323	Pocillopora_meandrina_HIv1___Sc0000021	6226710	6227744	1035	18636	1969	0.0013951491736424126	-	UCACAGAACCUGAACCCUCUAAUGGAUGGUC	3006	177	18077	47	114	96	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6227824-6228249	Cluster_5324	Pocillopora_meandrina_HIv1___Sc0000021	6227824	6228249	426	229	82	0.0	-	UGAUUUGCAGCUAACGGAGGUUUGACAGC	55	2	220	5	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6228305-6229009	Cluster_5325	Pocillopora_meandrina_HIv1___Sc0000021	6228305	6229009	705	5420	914	0.041328413284132844	-	UCAGUGUACUUGAGAUUGUGCAGCUCA	560	54	5122	40	21	89	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6229282-6231268	Cluster_5326	Pocillopora_meandrina_HIv1___Sc0000021	6229282	6231268	1987	4239	855	0.014390186364708658	-	UGAUACUUGCAUCAACUUGCACUACUGGC	601	34	4137	11	9	26	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6232086-6233002	Cluster_5327	Pocillopora_meandrina_HIv1___Sc0000021	6232086	6233002	917	736	309	0.001358695652173913	-	UAAAUUCACUGGUUCUCUGGAGUCAACC	28	9	709	4	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6485781-6486190	Cluster_5328	Pocillopora_meandrina_HIv1___Sc0000021	6485781	6486190	410	234	123	0.9230769230769231	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	28	2	212	0	0	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6486512-6486991	Cluster_5329	Pocillopora_meandrina_HIv1___Sc0000021	6486512	6486991	480	346	139	0.9190751445086706	+	UCCAAUCACACACAGUUCUCCUGCGGC	64	1	328	2	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6487009-6487615	Cluster_5330	Pocillopora_meandrina_HIv1___Sc0000021	6487009	6487615	607	1572	422	0.7741730279898219	.	ACCGCUUUUAAGAUUCUGAAAC	96	14	1297	34	114	25	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6487991-6489644	Cluster_5331	Pocillopora_meandrina_HIv1___Sc0000021	6487991	6489644	1654	3105	943	0.8927536231884058	+	UUUUACAUGUUUGACCUCUGGCAGGGCA	355	27	2898	16	19	45	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:149414-149842	Cluster_5332	Pocillopora_meandrina_HIv1___Sc0000022	149414	149842	429	126	38	0.9682539682539683	+	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	40	3	92	9	3	18	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:155777-156215	Cluster_5333	Pocillopora_meandrina_HIv1___Sc0000022	155777	156215	439	203	92	0.43842364532019706	.	UGAUAAAAAAACAGCAACAUCUCUGCCAGC	27	6	185	1	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:158075-158499	Cluster_5334	Pocillopora_meandrina_HIv1___Sc0000022	158075	158499	425	163	81	0.8159509202453987	+	UUCAAUCUCAGACCAUCCAGAUACU	16	2	146	0	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:159825-160249	Cluster_5335	Pocillopora_meandrina_HIv1___Sc0000022	159825	160249	425	270	118	0.7407407407407407	.	AGUGUUCUUAGUCAGCUGAAAGAAAUUUU	19	5	248	2	1	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:160663-161078	Cluster_5336	Pocillopora_meandrina_HIv1___Sc0000022	160663	161078	416	197	89	0.5888324873096447	.	UCGGAAUAUCAUUUUGAAGUCAUUUAUG	24	3	155	2	3	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:162309-162734	Cluster_5337	Pocillopora_meandrina_HIv1___Sc0000022	162309	162734	426	82	27	0.06097560975609756	-	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	43	13	68	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:282851-283277	Cluster_5338	Pocillopora_meandrina_HIv1___Sc0000022	282851	283277	427	141	44	0.7872340425531915	.	CUGUAAUAAAACUAUCUACUGGCAAGU	41	0	137	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:318503-318947	Cluster_5339	Pocillopora_meandrina_HIv1___Sc0000022	318503	318947	445	534	89	0.99812734082397	+	UGAUAUAUGUUCAUGUUUGGGUGUAAGUGC	70	1	527	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:554095-554522	Cluster_5340	Pocillopora_meandrina_HIv1___Sc0000022	554095	554522	428	280	111	0.9857142857142858	+	UGUUGAUGUAACCGUGAUCUUUGAAGG	18	2	253	4	2	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:554717-555135	Cluster_5341	Pocillopora_meandrina_HIv1___Sc0000022	554717	555135	419	215	113	0.9069767441860465	+	UCCAGUCGAGUAGUGCUAAAUAAAAAUU	11	2	196	1	1	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:555710-556633	Cluster_5342	Pocillopora_meandrina_HIv1___Sc0000022	555710	556633	924	820	323	0.9317073170731708	+	UGAAAAAUUUCCGGGGCUGGAGUAAUUCC	34	7	789	3	0	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:556708-557595	Cluster_5343	Pocillopora_meandrina_HIv1___Sc0000022	556708	557595	888	1232	414	0.7272727272727273	.	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	281	11	1122	6	7	20	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:557670-558303	Cluster_5344	Pocillopora_meandrina_HIv1___Sc0000022	557670	558303	634	1682	426	0.8478002378121284	+	UGUGAUAAAUGCAGCCACUCGAUACUCG	85	10	1606	8	13	14	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:558311-558798	Cluster_5345	Pocillopora_meandrina_HIv1___Sc0000022	558311	558798	488	184	112	0.17391304347826086	-	UUCAUCUUGUGAUCUAUUCGAAUUGUUU	17	9	143	2	3	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:559206-559633	Cluster_5346	Pocillopora_meandrina_HIv1___Sc0000022	559206	559633	428	142	39	1.0	+	UGUAAAAUCUGGCAUCCUAUUGGAUAAC	71	0	142	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:561059-562462	Cluster_5347	Pocillopora_meandrina_HIv1___Sc0000022	561059	562462	1404	9472	1140	0.9549197635135135	+	UUGGAUUGUAAUAAGGUACAAGAGGCUG	2224	75	9082	26	25	164	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:568214-568798	Cluster_5348	Pocillopora_meandrina_HIv1___Sc0000022	568214	568798	585	993	328	0.9909365558912386	+	UGUUCUUCUUGACUCUGACGAUCUUCAAC	114	2	979	1	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:569079-569951	Cluster_5349	Pocillopora_meandrina_HIv1___Sc0000022	569079	569951	873	870	368	0.9885057471264368	+	UGCUGAAACGAUUUUGACAGGUUGUCA	60	9	824	1	5	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:570341-571207	Cluster_5350	Pocillopora_meandrina_HIv1___Sc0000022	570341	571207	867	1207	415	0.9917149958574979	+	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	84	6	1183	5	3	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:571607-572035	Cluster_5351	Pocillopora_meandrina_HIv1___Sc0000022	571607	572035	429	196	102	0.9795918367346939	+	UGUGAUUUCUGCCUUUUCAUCCGGUGACU	16	1	192	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:572292-574176	Cluster_5352	Pocillopora_meandrina_HIv1___Sc0000022	572292	574176	1885	9256	2373	0.9204840103716508	+	UGAUAGACUGCACGACGAUUUACGUCA	556	105	8382	71	74	286	338	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:574230-575304	Cluster_5353	Pocillopora_meandrina_HIv1___Sc0000022	574230	575304	1075	8514	672	0.9964763918252291	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2213	20	8352	8	62	27	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:579552-579977	Cluster_5354	Pocillopora_meandrina_HIv1___Sc0000022	579552	579977	426	95	30	0.9894736842105263	+	UGUGUAGAUAUGUCUUUUGGACAGGA	25	0	95	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:583226-583653	Cluster_5355	Pocillopora_meandrina_HIv1___Sc0000022	583226	583653	428	220	109	1.0	+	UCGGACUUGACUGCGUAAAUGGCGUGAAA	22	2	207	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:591921-593905	Cluster_5356	Pocillopora_meandrina_HIv1___Sc0000022	591921	593905	1985	4782	1439	0.2179004600585529	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	237	61	4096	24	32	131	438	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:595321-596515	Cluster_5357	Pocillopora_meandrina_HIv1___Sc0000022	595321	596515	1195	3197	909	0.7566468564279012	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	667	32	2870	17	135	64	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:601615-602445	Cluster_5358	Pocillopora_meandrina_HIv1___Sc0000022	601615	602445	831	1309	598	0.868601986249045	+	UGCGUCUCUUCUAGGGCGGAAAUCCUGA	55	43	1149	22	14	33	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:602632-605304	Cluster_5359	Pocillopora_meandrina_HIv1___Sc0000022	602632	605304	2673	5138	1684	0.9120280264694434	+	UGUUUGUUGGUAGUUCUGGAUGAUUUCC	347	59	4775	24	39	97	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:609873-610283	Cluster_5360	Pocillopora_meandrina_HIv1___Sc0000022	609873	610283	411	148	84	0.9864864864864865	+	UACUGUCACAGAACUUGCACCUUGCCGUU	9	1	142	0	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:612083-612907	Cluster_5361	Pocillopora_meandrina_HIv1___Sc0000022	612083	612907	825	550	246	0.8581818181818182	+	UUAUUCACAAAUAUCUCCAAAUGUUCAA	54	8	494	7	5	9	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:613100-614026	Cluster_5362	Pocillopora_meandrina_HIv1___Sc0000022	613100	614026	927	2752	823	0.8677325581395349	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	257	25	2566	16	24	56	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:620318-621672	Cluster_5363	Pocillopora_meandrina_HIv1___Sc0000022	620318	621672	1355	1432	558	0.6103351955307262	.	UGUACUUCUCAAUAUUAAAAACUUCACU	89	13	1217	11	9	58	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:628299-628714	Cluster_5364	Pocillopora_meandrina_HIv1___Sc0000022	628299	628714	416	142	59	0.7887323943661971	.	UAAUUCUUAACGACUGUUCAUGUCCAUA	34	1	133	1	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:629958-630528	Cluster_5365	Pocillopora_meandrina_HIv1___Sc0000022	629958	630528	571	402	143	0.9552238805970149	+	UGCGACAAAGUACACCAUUUCUGAAGA	30	2	366	1	1	2	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:635878-636302	Cluster_5366	Pocillopora_meandrina_HIv1___Sc0000022	635878	636302	425	114	56	0.017543859649122806	-	UCUUCUCGUGAUUUCCGUUUCCUUCUC	21	1	105	2	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:642188-642683	Cluster_5367	Pocillopora_meandrina_HIv1___Sc0000022	642188	642683	496	295	133	0.4847457627118644	.	UGAUUUAGAAAUAAGAAAUGAUUCU	21	4	269	1	1	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:670832-671259	Cluster_5368	Pocillopora_meandrina_HIv1___Sc0000022	670832	671259	428	161	79	0.9813664596273292	+	UGUAGUUAUCUCUUUCUCCAAUUUUAGG	29	3	153	0	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:672154-672579	Cluster_5369	Pocillopora_meandrina_HIv1___Sc0000022	672154	672579	426	121	47	0.9669421487603306	+	UAGCGAUAGAAAAUCUUAACAAUUAU	26	1	119	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:675440-675925	Cluster_5370	Pocillopora_meandrina_HIv1___Sc0000022	675440	675925	486	1010	217	0.9841584158415841	+	UGUUCCAAUAUUUUUCGGUCGAGAUCCACU	215	18	938	42	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:676202-676915	Cluster_5371	Pocillopora_meandrina_HIv1___Sc0000022	676202	676915	714	2066	610	0.9404646660212972	+	UGAUAGCAACAAUGAAGGUCUGAAGAGA	84	31	1910	15	13	38	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:680302-680731	Cluster_5372	Pocillopora_meandrina_HIv1___Sc0000022	680302	680731	430	257	71	0.8988326848249028	+	UUCUUUAGGUCUUGGCAUUCAUCAGCA	37	1	235	0	6	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:720458-721174	Cluster_5373	Pocillopora_meandrina_HIv1___Sc0000022	720458	721174	717	3819	720	0.9814087457449594	+	UGUGAUAUUCCGAACACUUGAAUGAGUCA	203	26	3593	18	17	53	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:736660-737892	Cluster_5374	Pocillopora_meandrina_HIv1___Sc0000022	736660	737892	1233	2651	630	0.9155035835533761	+	UGGGAUUACAUGUGGAAUUAUUUGACCGCU	136	24	2462	7	10	46	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:768014-768799	Cluster_5375	Pocillopora_meandrina_HIv1___Sc0000022	768014	768799	786	1449	404	0.8881987577639752	+	UGCUGUCUAGUUCCGACUAUCAUAAACUC	66	19	1349	2	7	15	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:775919-776938	Cluster_5376	Pocillopora_meandrina_HIv1___Sc0000022	775919	776938	1020	4740	457	0.026582278481012658	-	UGUGACAGCUCUUUUCCUCCUGCAAAGA	724	36	4025	452	59	48	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:788297-788726	Cluster_5377	Pocillopora_meandrina_HIv1___Sc0000022	788297	788726	430	299	44	1.0	+	UGCAUUUCUAAUUCUGGUUUCGGUUACUCC	151	1	298	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:813610-814041	Cluster_5378	Pocillopora_meandrina_HIv1___Sc0000022	813610	814041	432	21418	247	0.0025212438136147167	-	UAACUUCAACUAGAUCGAAAUGCUCGUGA	15210	6	21326	2	2	6	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:836778-837206	Cluster_5379	Pocillopora_meandrina_HIv1___Sc0000022	836778	837206	429	214	122	0.897196261682243	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	13	2	203	1	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:837291-837710	Cluster_5380	Pocillopora_meandrina_HIv1___Sc0000022	837291	837710	420	307	201	0.9348534201954397	+	UGUACGAGUCAGACACGUGGAUACUUGC	14	1	280	0	4	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:838065-838480	Cluster_5381	Pocillopora_meandrina_HIv1___Sc0000022	838065	838480	416	227	108	0.8986784140969163	+	UCUACGUCUAUCAACCAGGAAUGAAACUCGU	19	3	203	5	3	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:839221-839648	Cluster_5382	Pocillopora_meandrina_HIv1___Sc0000022	839221	839648	428	196	54	0.6938775510204082	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	34	0	149	1	3	1	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:844611-845312	Cluster_5383	Pocillopora_meandrina_HIv1___Sc0000022	844611	845312	702	270	130	0.9259259259259259	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	34	0	260	0	2	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:846541-846971	Cluster_5384	Pocillopora_meandrina_HIv1___Sc0000022	846541	846971	431	286	159	0.8356643356643356	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	29	3	255	4	1	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:879826-880278	Cluster_5385	Pocillopora_meandrina_HIv1___Sc0000022	879826	880278	453	198	109	0.30303030303030304	.	CGCGAUCUUCGGUUGCCUGA	17	95	33	45	13	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1097609-1098029	Cluster_5386	Pocillopora_meandrina_HIv1___Sc0000022	1097609	1098029	421	79	36	0.0	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	15	0	78	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1101425-1101852	Cluster_5387	Pocillopora_meandrina_HIv1___Sc0000022	1101425	1101852	428	164	50	0.0975609756097561	-	UGUAAUAAUCGUUUUGGGUAAUCUCAACA	56	1	150	0	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1103330-1103759	Cluster_5388	Pocillopora_meandrina_HIv1___Sc0000022	1103330	1103759	430	835	151	0.9568862275449102	+	UAGUAUAACUUUGAUCUGAUGAAAAUCAUC	303	1	819	1	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1209663-1210079	Cluster_5389	Pocillopora_meandrina_HIv1___Sc0000022	1209663	1210079	417	115	65	1.0	+	UGCUCAUAUCUAAUAGAACUACUGCCGUU	20	1	110	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1339659-1340085	Cluster_5390	Pocillopora_meandrina_HIv1___Sc0000022	1339659	1340085	427	150	23	0.9866666666666667	+	UGUUGAACAAUCGUGUACGGUGUGGGA	79	0	147	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1443632-1444321	Cluster_5391	Pocillopora_meandrina_HIv1___Sc0000022	1443632	1444321	690	431	132	0.962877030162413	+	AAAGAUCUGAAUUGACAAAUAGUGUACAGU	101	4	366	2	3	17	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1490221-1490639	Cluster_5392	Pocillopora_meandrina_HIv1___Sc0000022	1490221	1490639	419	267	177	0.9962546816479401	+	GAGCUAUUGAAAUUUUGACGAAAU	10	46	135	17	28	16	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1757056-1757482	Cluster_5393	Pocillopora_meandrina_HIv1___Sc0000022	1757056	1757482	427	132	49	0.9621212121212122	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	41	4	121	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1877335-1878073	Cluster_5394	Pocillopora_meandrina_HIv1___Sc0000022	1877335	1878073	739	873	309	0.054982817869415807	-	UCCGUGACACAACGACUUUGCCUUGCUU	122	7	849	3	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1878243-1878679	Cluster_5395	Pocillopora_meandrina_HIv1___Sc0000022	1878243	1878679	437	456	218	0.16666666666666666	-	UAUGACGUUCCAGAAUCUUUGACAAAA	38	1	434	7	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1879214-1879642	Cluster_5396	Pocillopora_meandrina_HIv1___Sc0000022	1879214	1879642	429	136	42	0.0	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	18	1	133	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2039814-2040242	Cluster_5397	Pocillopora_meandrina_HIv1___Sc0000022	2039814	2040242	429	280	57	0.7892857142857143	.	UGAUAUCAUAUUCUCUGUUUCCUCAUC	99	16	216	12	7	23	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2724250-2724677	Cluster_5398	Pocillopora_meandrina_HIv1___Sc0000022	2724250	2724677	428	198	86	0.005050505050505051	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	3	184	0	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2864952-2865381	Cluster_5399	Pocillopora_meandrina_HIv1___Sc0000022	2864952	2865381	430	353	100	0.014164305949008499	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	39	0	348	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2866527-2867222	Cluster_5400	Pocillopora_meandrina_HIv1___Sc0000022	2866527	2867222	696	255	114	0.44313725490196076	.	UCCGAAAAAUGUCAACAGAGAACUGCUUG	44	1	247	5	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2931954-2932373	Cluster_5401	Pocillopora_meandrina_HIv1___Sc0000022	2931954	2932373	420	252	44	0.003968253968253968	-	CUCUGUCUCUGUCCGUGU	58	220	11	5	7	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2937470-2937899	Cluster_5402	Pocillopora_meandrina_HIv1___Sc0000022	2937470	2937899	430	156	41	0.9807692307692307	+	ACAUAUACCGGGUAUUUCUAAACACUGCUU	30	4	140	1	7	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3392158-3392706	Cluster_5403	Pocillopora_meandrina_HIv1___Sc0000022	3392158	3392706	549	540	359	0.0	-	GAAGGAGUUCGGUGGAGCUGUAGACA	8	131	230	42	60	41	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4272758-4273191	Cluster_5404	Pocillopora_meandrina_HIv1___Sc0000022	4272758	4273191	434	432	62	0.006944444444444444	-	UGAUUUGUGACUGCUGUUGUUGCAUGGC	185	3	425	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4274319-4274900	Cluster_5405	Pocillopora_meandrina_HIv1___Sc0000022	4274319	4274900	582	585	237	0.7196581196581197	.	UCAAAAUCUUCGUAAUUCUGGUAAGGA	43	9	518	8	6	21	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4311659-4312086	Cluster_5406	Pocillopora_meandrina_HIv1___Sc0000022	4311659	4312086	428	93	30	0.9247311827956989	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	51	0	89	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4315335-4315931	Cluster_5407	Pocillopora_meandrina_HIv1___Sc0000022	4315335	4315931	597	5701	498	0.0019294860550780565	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	868	11	5646	6	3	11	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4334556-4334977	Cluster_5408	Pocillopora_meandrina_HIv1___Sc0000022	4334556	4334977	422	224	24	0.9866071428571429	+	UCUGACGAAGGGCUGACGCUCA	171	7	1	16	186	12	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4496866-4497284	Cluster_5409	Pocillopora_meandrina_HIv1___Sc0000022	4496866	4497284	419	158	5	1.0	+	AUGGACUAUGAUUUUUUU	74	158	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4641549-4641974	Cluster_5410	Pocillopora_meandrina_HIv1___Sc0000022	4641549	4641974	426	102	34	1.0	+	UGUGUAGAUAUGUCUUUUGGACAGGA	33	1	99	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4679819-4680359	Cluster_5411	Pocillopora_meandrina_HIv1___Sc0000022	4679819	4680359	541	500	165	0.494	.	AUGAGAUUCAUGAAUGGAGACAACC	43	1	443	6	14	3	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4681239-4681674	Cluster_5412	Pocillopora_meandrina_HIv1___Sc0000022	4681239	4681674	436	475	103	0.9957894736842106	+	UGUAAGACUGACAAAGGCUAAGGUGAACAGC	108	6	454	2	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4773435-4774094	Cluster_5413	Pocillopora_meandrina_HIv1___Sc0000022	4773435	4774094	660	597	117	0.9363484087102177	+	UUUCAAACUAAGGAAGGAGAAAGGGAUA	81	5	457	4	6	9	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4949268-4950131	Cluster_5414	Pocillopora_meandrina_HIv1___Sc0000022	4949268	4950131	864	700	321	0.3442857142857143	.	UGCUGUAUCAUCUGAAAACAAAGAAUGC	35	6	620	11	4	17	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4995172-4995791	Cluster_5415	Pocillopora_meandrina_HIv1___Sc0000022	4995172	4995791	620	18620	2353	0.000966702470461869	-	CCUCUGAGCGCGAAGCACGUUGCC	1245	4111	6549	1521	2335	1655	2449	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5033872-5034408	Cluster_5416	Pocillopora_meandrina_HIv1___Sc0000022	5033872	5034408	537	835	294	1.0	+	GACAGAACGUUUGAUGGAAUU	63	146	415	113	60	72	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5113155-5113580	Cluster_5417	Pocillopora_meandrina_HIv1___Sc0000022	5113155	5113580	426	87	33	0.022988505747126436	-	UGUGUAGAUAUGUCUUUUGGACAGGA	22	0	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5232770-5233198	Cluster_5418	Pocillopora_meandrina_HIv1___Sc0000022	5232770	5233198	429	104	30	0.9615384615384616	+	AACUGAAGAACCGAUCUCUAAAAUUGAUU	45	1	98	1	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5310368-5310789	Cluster_5419	Pocillopora_meandrina_HIv1___Sc0000022	5310368	5310789	422	157	13	1.0	+	UCUGACGAAGGGCUGACGCUCA	130	6	0	5	141	5	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5319073-5319530	Cluster_5420	Pocillopora_meandrina_HIv1___Sc0000022	5319073	5319530	458	189	83	0.9153439153439153	+	UCGAUGUUACUGUCCGUUCUCCGUUGA	39	2	171	3	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5625640-5626072	Cluster_5421	Pocillopora_meandrina_HIv1___Sc0000022	5625640	5626072	433	325	111	0.9815384615384616	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	35	9	299	3	4	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5637573-5637993	Cluster_5422	Pocillopora_meandrina_HIv1___Sc0000022	5637573	5637993	421	171	17	0.0	-	GUGAUAGAUCUUUUGGAGACGA	50	103	0	17	50	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5787456-5787885	Cluster_5423	Pocillopora_meandrina_HIv1___Sc0000022	5787456	5787885	430	576	122	0.9965277777777778	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	116	1	570	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5788006-5788536	Cluster_5424	Pocillopora_meandrina_HIv1___Sc0000022	5788006	5788536	531	585	236	0.9829059829059829	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	36	2	569	3	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5790680-5791105	Cluster_5425	Pocillopora_meandrina_HIv1___Sc0000022	5790680	5791105	426	120	49	0.975	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	20	1	115	2	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:6057719-6058222	Cluster_5426	Pocillopora_meandrina_HIv1___Sc0000022	6057719	6058222	504	1934	361	0.0	-	GAAGGAUGAUGACCUAAAAGGCC	185	272	504	136	359	487	176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3659-5396	Cluster_5427	Pocillopora_meandrina_HIv1___Sc0000023	3659	5396	1738	2793	1078	0.04081632653061224	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	110	12	2669	4	23	46	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:132586-133142	Cluster_5428	Pocillopora_meandrina_HIv1___Sc0000023	132586	133142	557	491	185	0.0	-	GAAUUUUGCAGGCUCAUACAACU	44	79	239	30	46	67	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:134704-135255	Cluster_5429	Pocillopora_meandrina_HIv1___Sc0000023	134704	135255	552	1785	397	0.0	-	GCUUACUGCCAGACUACAGAC	203	466	689	347	95	120	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:288293-288719	Cluster_5430	Pocillopora_meandrina_HIv1___Sc0000023	288293	288719	427	142	34	0.971830985915493	+	UUUGACUGUAUUUUUUAUUCCUA	38	2	94	2	2	42	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:613115-613526	Cluster_5431	Pocillopora_meandrina_HIv1___Sc0000023	613115	613526	412	113	52	0.08849557522123894	-	UGAACAAACGUGAGCUUGAGCGAAUUGAAC	28	4	102	1	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:613556-613981	Cluster_5432	Pocillopora_meandrina_HIv1___Sc0000023	613556	613981	426	120	53	0.008333333333333333	-	ACGAUCACGUCGAACUGUAUGGCAGCUAGC	17	3	112	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:622107-622951	Cluster_5433	Pocillopora_meandrina_HIv1___Sc0000023	622107	622951	845	754	249	0.2718832891246684	.	UGUUGGACUCUCCAUGGAUGCGCCUGG	63	7	668	10	2	17	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:623837-624248	Cluster_5434	Pocillopora_meandrina_HIv1___Sc0000023	623837	624248	412	159	79	0.08176100628930817	-	UUAGAUGAUCUUGUGUCUGUGUUAAGAGA	11	1	152	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:662021-662449	Cluster_5435	Pocillopora_meandrina_HIv1___Sc0000023	662021	662449	429	264	95	0.2689393939393939	.	UAGGACAAUUAGCAUUACAGCAGCUUA	28	3	245	1	5	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:663892-664317	Cluster_5436	Pocillopora_meandrina_HIv1___Sc0000023	663892	664317	426	186	96	0.9086021505376344	+	UAUCGAGUACUUACGGCGAAGGAGGCCA	14	1	171	1	4	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:664380-664805	Cluster_5437	Pocillopora_meandrina_HIv1___Sc0000023	664380	664805	426	122	41	0.9754098360655737	+	UGAUAAGUGGAGCCAGGCGUACAUCUAG	16	1	113	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:723792-724221	Cluster_5438	Pocillopora_meandrina_HIv1___Sc0000023	723792	724221	430	211	48	0.990521327014218	+	UGUUAAUCGAGAGAAGCAUAGACGCAAAUC	103	0	210	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:754024-754453	Cluster_5439	Pocillopora_meandrina_HIv1___Sc0000023	754024	754453	430	332	40	1.0	+	UUCCAUGACUCUGUUUAAACGAAAACGAAC	199	0	332	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:757102-757624	Cluster_5440	Pocillopora_meandrina_HIv1___Sc0000023	757102	757624	523	4817	295	0.9958480381980486	+	UGUUAUUUGUGUCUAAUGUUGUCGAACAC	953	10	4760	8	9	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:757805-758231	Cluster_5441	Pocillopora_meandrina_HIv1___Sc0000023	757805	758231	427	184	92	0.20108695652173914	.	UGAGGAAUCGAGAUGGCUAGCUGUGUU	32	19	137	1	11	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:758300-758730	Cluster_5442	Pocillopora_meandrina_HIv1___Sc0000023	758300	758730	431	659	58	0.006069802731411229	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	233	0	657	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:765065-766077	Cluster_5443	Pocillopora_meandrina_HIv1___Sc0000023	765065	766077	1013	2942	410	0.9626104690686608	+	UCGGAUCUUUCACCUCAUGAGCAGCGAGA	875	10	2891	3	0	15	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1061848-1062274	Cluster_5444	Pocillopora_meandrina_HIv1___Sc0000023	1061848	1062274	427	189	19	0.9682539682539683	+	UGGUAAAAUUCUGUUCAAAGUAGGUGC	163	0	187	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1539197-1539697	Cluster_5445	Pocillopora_meandrina_HIv1___Sc0000023	1539197	1539697	501	365	180	0.019178082191780823	-	AAGACAACGACACAUUUGUGCAUUC	36	66	171	38	16	27	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1594033-1594461	Cluster_5446	Pocillopora_meandrina_HIv1___Sc0000023	1594033	1594461	429	93	17	0.0	-	CUCAUGUACAGCAGAACUUGUUGAAUCUG	60	2	89	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1635912-1636355	Cluster_5447	Pocillopora_meandrina_HIv1___Sc0000023	1635912	1636355	444	990	169	1.0	+	UUCCUCUCUGAGCUUACCACAGUCAUGUGAU	220	147	614	78	17	67	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1636538-1636961	Cluster_5448	Pocillopora_meandrina_HIv1___Sc0000023	1636538	1636961	424	113	55	0.9823008849557522	+	AUGUGGAUUAUUUGGUUUAUGAUA	20	7	54	4	8	15	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1648832-1649372	Cluster_5449	Pocillopora_meandrina_HIv1___Sc0000023	1648832	1649372	541	3506	798	1.0	+	ACCCAAAGUGUCAAAUUCCUGGAUA	397	433	1899	522	174	220	258	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1653651-1654082	Cluster_5450	Pocillopora_meandrina_HIv1___Sc0000023	1653651	1654082	432	370	124	1.0	+	ACUAUGUUGAUAUUAGGACGGCAUGAGGUUG	77	52	260	9	12	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1661771-1662196	Cluster_5451	Pocillopora_meandrina_HIv1___Sc0000023	1661771	1662196	426	138	64	1.0	+	AUGUGGAUUAUUUGGUUUAUGAUA	20	7	74	7	8	14	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1887619-1888052	Cluster_5452	Pocillopora_meandrina_HIv1___Sc0000023	1887619	1888052	434	182	68	0.0	-	AACGUGUCACUUGCGAAGAAAUCUGAAGU	23	2	175	3	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1889295-1889722	Cluster_5453	Pocillopora_meandrina_HIv1___Sc0000023	1889295	1889722	428	189	67	0.9788359788359788	+	UGAACCGUGCCGAUCUGCUGCCCUUUGA	47	1	183	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2039300-2039724	Cluster_5454	Pocillopora_meandrina_HIv1___Sc0000023	2039300	2039724	425	79	28	0.0379746835443038	-	UGUGUAGAUAUGUCUUUUGGACAGGA	22	0	79	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2092558-2092986	Cluster_5455	Pocillopora_meandrina_HIv1___Sc0000023	2092558	2092986	429	110	22	0.00909090909090909	-	UCUACAUAAUCUCUUUCUGCAUCACUGAAG	51	2	107	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2508727-2509156	Cluster_5456	Pocillopora_meandrina_HIv1___Sc0000023	2508727	2509156	430	120	28	0.008333333333333333	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	52	2	118	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2562485-2562914	Cluster_5457	Pocillopora_meandrina_HIv1___Sc0000023	2562485	2562914	430	155	57	1.0	+	UGCUUCUAACUCGGGCUGUCUGCCACAGUGG	35	2	151	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2586871-2587289	Cluster_5458	Pocillopora_meandrina_HIv1___Sc0000023	2586871	2587289	419	684	19	1.0	+	CUUUCUGGAGUUAAGGAU	447	680	0	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2665435-2666773	Cluster_5459	Pocillopora_meandrina_HIv1___Sc0000023	2665435	2666773	1339	3108	249	0.9932432432432432	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	1667	10	3063	4	4	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2667925-2668655	Cluster_5460	Pocillopora_meandrina_HIv1___Sc0000023	2667925	2668655	731	327	125	0.44036697247706424	.	CUUGUCUUCGAUCGACAGAGUCAUGUAGU	26	21	242	19	7	7	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2715856-2716273	Cluster_5461	Pocillopora_meandrina_HIv1___Sc0000023	2715856	2716273	418	100	47	0.79	.	ACGGAAAAUGCGUGCACUGU	23	78	2	11	3	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2752938-2754130	Cluster_5462	Pocillopora_meandrina_HIv1___Sc0000023	2752938	2754130	1193	3236	891	0.2391841779975278	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	706	33	2949	17	107	41	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2755547-2757533	Cluster_5463	Pocillopora_meandrina_HIv1___Sc0000023	2755547	2757533	1987	4823	1478	0.7860252954592577	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	264	54	4111	40	35	121	462	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2850001-2850429	Cluster_5464	Pocillopora_meandrina_HIv1___Sc0000023	2850001	2850429	429	158	40	0.9683544303797469	+	UGCUUUAGUCACAGACUUUGCACCUGAAA	53	5	148	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2851851-2852313	Cluster_5465	Pocillopora_meandrina_HIv1___Sc0000023	2851851	2852313	463	415	130	0.7349397590361446	.	UUUAUGCGGUCUUUGAUGCCGAGAAGUCUGC	66	7	390	2	5	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3040453-3040893	Cluster_5466	Pocillopora_meandrina_HIv1___Sc0000023	3040453	3040893	441	1683	106	0.8847296494355318	+	UGAAUCCGCUUUGCAGCAUAAAUGAGC	998	8	1477	11	3	16	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3041762-3042170	Cluster_5467	Pocillopora_meandrina_HIv1___Sc0000023	3041762	3042170	409	166	89	0.6927710843373494	.	CAGUUGUCAACUGGAGUAGGGCCA	12	1	130	0	1	18	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3042931-3043511	Cluster_5468	Pocillopora_meandrina_HIv1___Sc0000023	3042931	3043511	581	256	112	0.8984375	+	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCA	34	6	242	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3062000-3062424	Cluster_5469	Pocillopora_meandrina_HIv1___Sc0000023	3062000	3062424	425	80	36	0.05	-	CUUGUCUUCGAUCGACAGAGUCGUGUAGU	8	0	77	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3062445-3062972	Cluster_5470	Pocillopora_meandrina_HIv1___Sc0000023	3062445	3062972	528	4969	454	0.9370094586435903	+	UAUGUUGAACGAGAACUGAGGACCUCGAUC	775	22	4787	10	22	70	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3120578-3121006	Cluster_5471	Pocillopora_meandrina_HIv1___Sc0000023	3120578	3121006	429	1491	72	1.0	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	1000	2	1488	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3121387-3121812	Cluster_5472	Pocillopora_meandrina_HIv1___Sc0000023	3121387	3121812	426	178	62	0.4044943820224719	.	UCUGCAUGAAGAACAGACCACCUGAUGA	17	1	168	3	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3123006-3123500	Cluster_5473	Pocillopora_meandrina_HIv1___Sc0000023	3123006	3123500	495	1215	203	0.8551440329218107	+	UGAUAAGCUCAGAUCGCUCGAUGUCAGU	303	10	1160	12	5	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3142922-3143514	Cluster_5474	Pocillopora_meandrina_HIv1___Sc0000023	3142922	3143514	593	1786	341	0.6998880179171333	.	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCA	193	16	1636	18	12	26	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3160642-3161069	Cluster_5475	Pocillopora_meandrina_HIv1___Sc0000023	3160642	3161069	428	188	70	0.9148936170212766	+	UGAUGCCGAGAAGUCUGCUCUCCUGAGU	34	4	180	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3235979-3236407	Cluster_5476	Pocillopora_meandrina_HIv1___Sc0000023	3235979	3236407	429	165	51	0.8909090909090909	+	UGCUUUAGUCACAGACUUUGCACCUGAAA	56	5	156	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3237033-3237463	Cluster_5477	Pocillopora_meandrina_HIv1___Sc0000023	3237033	3237463	431	690	185	0.9927536231884058	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	191	1	679	0	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3237511-3238230	Cluster_5478	Pocillopora_meandrina_HIv1___Sc0000023	3237511	3238230	720	503	266	0.9343936381709742	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	23	2	459	4	3	8	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3239517-3239952	Cluster_5479	Pocillopora_meandrina_HIv1___Sc0000023	3239517	3239952	436	240	87	0.9291666666666667	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	41	1	221	1	0	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3240558-3241069	Cluster_5480	Pocillopora_meandrina_HIv1___Sc0000023	3240558	3241069	512	376	207	0.8111702127659575	+	UGACUCACCGACCUCCUGUACUCUCUGA	14	7	309	6	5	12	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3309180-3309773	Cluster_5481	Pocillopora_meandrina_HIv1___Sc0000023	3309180	3309773	594	310	147	0.49032258064516127	.	UGCAUUCUUUGUGGCGUACGUUCUGCUU	33	3	289	3	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3394590-3395020	Cluster_5482	Pocillopora_meandrina_HIv1___Sc0000023	3394590	3395020	431	235	52	0.01276595744680851	-	GCUUGGUUGAUAUUUGUACAAAAUUGAAAUA	60	3	225	0	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3409021-3409451	Cluster_5483	Pocillopora_meandrina_HIv1___Sc0000023	3409021	3409451	431	150	78	0.02	-	UUGGACGUAGAUGUUUGUUUACAUCGUG	21	0	145	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3409791-3410221	Cluster_5484	Pocillopora_meandrina_HIv1___Sc0000023	3409791	3410221	431	133	62	0.06015037593984962	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	38	0	128	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3436895-3437312	Cluster_5485	Pocillopora_meandrina_HIv1___Sc0000023	3436895	3437312	418	165	4	1.0	+	UGGCCUGAAAAAAAAAAA	162	165	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3471890-3472332	Cluster_5486	Pocillopora_meandrina_HIv1___Sc0000023	3471890	3472332	443	316	87	0.6772151898734177	.	UGAAGUAAGCACCCUGGUCUCUGCCAAG	87	1	301	0	4	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3700809-3701236	Cluster_5487	Pocillopora_meandrina_HIv1___Sc0000023	3700809	3701236	428	199	81	0.135678391959799	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	41	3	179	2	4	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3723474-3723972	Cluster_5488	Pocillopora_meandrina_HIv1___Sc0000023	3723474	3723972	499	4622	325	0.9935093033318909	+	UGCUUCUCGAUUCACAUUUUCAUUCUGC	1108	10	4576	7	6	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3781664-3782072	Cluster_5489	Pocillopora_meandrina_HIv1___Sc0000023	3781664	3782072	409	124	90	0.11290322580645161	-	UACAGACAUAAGAGUUUUUGUUUACCGGAG	7	1	115	0	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3791602-3792146	Cluster_5490	Pocillopora_meandrina_HIv1___Sc0000023	3791602	3792146	545	299	119	0.10367892976588629	-	UACCAUCUGACCUUGCCAAAAUUCGAGC	27	14	269	2	2	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3933281-3934530	Cluster_5491	Pocillopora_meandrina_HIv1___Sc0000023	3933281	3934530	1250	894	401	0.7069351230425056	.	UUGGAUUGUAAUAAGGUACAAGAGGCUG	40	11	727	5	8	86	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3936607-3937027	Cluster_5492	Pocillopora_meandrina_HIv1___Sc0000023	3936607	3937027	421	178	80	0.10674157303370786	-	UCAGUGAUCAUGGAAAUUUCG	19	5	107	29	3	32	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3938983-3939411	Cluster_5493	Pocillopora_meandrina_HIv1___Sc0000023	3938983	3939411	429	167	40	0.3592814371257485	.	UAAAGAGGACUGAUAAUCUCAGGUUAUC	49	0	131	1	6	5	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3939486-3939910	Cluster_5494	Pocillopora_meandrina_HIv1___Sc0000023	3939486	3939910	425	189	51	0.010582010582010581	-	UGCCGUGGAAAGGUUAAUCUCGAGG	44	2	124	1	16	11	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4040030-4040525	Cluster_5495	Pocillopora_meandrina_HIv1___Sc0000023	4040030	4040525	496	217	104	0.7603686635944701	.	UGUAAGACGCACUCUACUCUGUUGU	26	29	166	4	7	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4040697-4041185	Cluster_5496	Pocillopora_meandrina_HIv1___Sc0000023	4040697	4041185	489	1994	156	0.11033099297893681	-	UUAACUCCACGGUGCCAAUGACUUUCUU	487	9	1908	7	7	28	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4042473-4042969	Cluster_5497	Pocillopora_meandrina_HIv1___Sc0000023	4042473	4042969	497	362	165	0.861878453038674	+	UUGGAACGUGUUGCUGAACGCUUGCU	44	23	311	4	8	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4071654-4072074	Cluster_5498	Pocillopora_meandrina_HIv1___Sc0000023	4071654	4072074	421	94	38	0.9574468085106383	+	UGAUUACACUGUCAAAAAUUCCUGCGAA	17	2	87	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4466900-4467330	Cluster_5499	Pocillopora_meandrina_HIv1___Sc0000023	4466900	4467330	431	828	79	0.007246376811594203	-	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	286	0	815	1	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4544171-4544592	Cluster_5500	Pocillopora_meandrina_HIv1___Sc0000023	4544171	4544592	422	75	2	1.0	+	UCUGACGAAGGGCUGACACUCG	73	0	0	0	73	0	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4579509-4579936	Cluster_5501	Pocillopora_meandrina_HIv1___Sc0000023	4579509	4579936	428	84	34	0.05952380952380952	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	24	0	81	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4681114-4681542	Cluster_5502	Pocillopora_meandrina_HIv1___Sc0000023	4681114	4681542	429	226	35	1.0	+	CGCGGAAAGAGGGGAAAUUGCACUCUCCC	35	17	181	7	3	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4714493-4714932	Cluster_5503	Pocillopora_meandrina_HIv1___Sc0000023	4714493	4714932	440	266	130	0.9962406015037594	+	AGAUUGAACCACCCAUAGGCUGAUA	23	32	178	14	9	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4716503-4716988	Cluster_5504	Pocillopora_meandrina_HIv1___Sc0000023	4716503	4716988	486	587	225	1.0	+	GAGAAAUGAUGACAGAAU	49	145	344	34	21	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4794386-4794809	Cluster_5505	Pocillopora_meandrina_HIv1___Sc0000023	4794386	4794809	424	25066	190	3.989467804994814e-05	-	UGUCUGUGAGAAUUUAGCUCGU	13475	1017	24	261	21455	2043	266	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5048164-5048594	Cluster_5506	Pocillopora_meandrina_HIv1___Sc0000023	5048164	5048594	431	413	119	0.927360774818402	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	108	4	383	0	0	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5049201-5049799	Cluster_5507	Pocillopora_meandrina_HIv1___Sc0000023	5049201	5049799	599	374	223	0.8021390374331551	+	UAGAGACUUUAAGUACUGGAAAUACUUA	17	4	317	5	11	3	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5063417-5063846	Cluster_5508	Pocillopora_meandrina_HIv1___Sc0000023	5063417	5063846	430	212	58	0.0	-	UGUUAAUCGAGAGAAGCAUAGACGCAAAUC	72	0	206	3	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5256083-5256502	Cluster_5509	Pocillopora_meandrina_HIv1___Sc0000023	5256083	5256502	420	212	14	1.0	+	AUUGUGGUUUUGAUCUUUUU	77	186	0	25	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5493397-5493824	Cluster_5510	Pocillopora_meandrina_HIv1___Sc0000023	5493397	5493824	428	182	49	1.0	+	UCUUGAAGCCUUGUCAGCUGGUCUGCCU	25	4	175	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5719271-5720758	Cluster_5511	Pocillopora_meandrina_HIv1___Sc0000023	5719271	5720758	1488	8098	1903	0.21425043220548284	.	UGCAGUGAAUGGAGAGAUCUGACAUCAGUC	707	103	7002	43	41	291	618	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5720774-5721819	Cluster_5512	Pocillopora_meandrina_HIv1___Sc0000023	5720774	5721819	1046	2634	755	0.044798785117691725	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	286	39	2472	10	32	34	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5721886-5722297	Cluster_5513	Pocillopora_meandrina_HIv1___Sc0000023	5721886	5722297	412	115	71	0.0	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	8	4	101	1	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:147469-147898	Cluster_5514	Pocillopora_meandrina_HIv1___Sc0000024	147469	147898	430	1217	22	0.9967132292522597	+	UGUGAUGUAGAUUGCAACAUUUCGACUGC	524	1	1208	3	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:210383-212120	Cluster_5515	Pocillopora_meandrina_HIv1___Sc0000024	210383	212120	1738	2654	1032	0.04709871891484552	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	109	17	2498	6	26	67	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:467347-467772	Cluster_5516	Pocillopora_meandrina_HIv1___Sc0000024	467347	467772	426	101	32	0.0297029702970297	-	UGUGUAGAUAUGUCUUUUGGACAGGA	31	0	100	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:704432-704953	Cluster_5517	Pocillopora_meandrina_HIv1___Sc0000024	704432	704953	522	1562	369	0.08322663252240717	-	UCCUCGCUAAGAAUUCUUAUUUCGUCG	179	13	1418	17	45	26	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:705080-706057	Cluster_5518	Pocillopora_meandrina_HIv1___Sc0000024	705080	706057	978	1115	405	0.6968609865470852	.	UAACUUCUUGGCUGAUUUAAAAUUUAUGUC	60	10	1038	7	6	21	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:776195-776622	Cluster_5519	Pocillopora_meandrina_HIv1___Sc0000024	776195	776622	428	177	76	1.0	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	34	3	170	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:777922-778962	Cluster_5520	Pocillopora_meandrina_HIv1___Sc0000024	777922	778962	1041	285	128	0.8736842105263158	+	UGGUUAUGUAAAUGAGGUUUCCUGUGAAGG	21	0	268	1	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:956651-957078	Cluster_5521	Pocillopora_meandrina_HIv1___Sc0000024	956651	957078	428	127	32	0.0	-	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	24	0	127	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1007371-1007818	Cluster_5522	Pocillopora_meandrina_HIv1___Sc0000024	1007371	1007818	448	457	109	0.5339168490153173	.	AUAGCUCGAACGAGGACUCGUCCUUAACA	91	2	398	4	7	6	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1008128-1008555	Cluster_5523	Pocillopora_meandrina_HIv1___Sc0000024	1008128	1008555	428	184	37	0.005434782608695652	-	UGGUAAACUUCCCUAACAUUGGCCUGUG	42	0	183	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1010264-1010698	Cluster_5524	Pocillopora_meandrina_HIv1___Sc0000024	1010264	1010698	435	4522	267	0.005970809376382132	-	UUGUUUACCUCUUGUCGUCUCUUAGUUUG	969	9	4436	3	30	35	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1010708-1011221	Cluster_5525	Pocillopora_meandrina_HIv1___Sc0000024	1010708	1011221	514	974	273	0.07905544147843943	-	UUCUUCUUUGGCCUCUCUGAGUCUGAGC	107	10	926	1	3	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1094342-1094767	Cluster_5526	Pocillopora_meandrina_HIv1___Sc0000024	1094342	1094767	426	93	26	0.043010752688172046	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	1	91	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1592893-1594423	Cluster_5527	Pocillopora_meandrina_HIv1___Sc0000024	1592893	1594423	1531	1277	520	0.980422866092404	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	98	14	1217	2	8	20	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1594645-1595069	Cluster_5528	Pocillopora_meandrina_HIv1___Sc0000024	1594645	1595069	425	240	134	0.9541666666666667	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	29	1	212	7	0	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1596077-1597127	Cluster_5529	Pocillopora_meandrina_HIv1___Sc0000024	1596077	1597127	1051	922	368	0.955531453362256	+	UAACAUCUCUCUUUCCGACUUUAACAGC	43	10	865	8	8	16	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1597181-1598862	Cluster_5530	Pocillopora_meandrina_HIv1___Sc0000024	1597181	1598862	1682	1796	785	0.893652561247216	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	87	23	1644	7	19	22	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1737905-1738332	Cluster_5531	Pocillopora_meandrina_HIv1___Sc0000024	1737905	1738332	428	97	14	0.030927835051546393	-	UAACCCGAGAACUGACACGUGAGUAGUC	56	7	81	0	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1742427-1742854	Cluster_5532	Pocillopora_meandrina_HIv1___Sc0000024	1742427	1742854	428	108	13	0.009259259259259259	-	UAACCCGAGAACUGACACGUGAGUAGUC	69	1	101	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1971890-1972476	Cluster_5533	Pocillopora_meandrina_HIv1___Sc0000024	1971890	1972476	587	196	69	0.9846938775510204	+	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	33	1	185	2	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1972818-1973284	Cluster_5534	Pocillopora_meandrina_HIv1___Sc0000024	1972818	1973284	467	656	152	0.8810975609756098	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	90	1	633	0	11	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1975327-1975861	Cluster_5535	Pocillopora_meandrina_HIv1___Sc0000024	1975327	1975861	535	645	123	0.9720930232558139	+	UCAGACUGUGCAUAACCAUUUGCAAACG	87	1	596	0	12	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1988580-1989093	Cluster_5536	Pocillopora_meandrina_HIv1___Sc0000024	1988580	1989093	514	3021	165	0.9281694803045349	+	UUGUCUAGUAUUGACCUUGUGACUUGUGC	1429	5	2994	9	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2043021-2044270	Cluster_5537	Pocillopora_meandrina_HIv1___Sc0000024	2043021	2044270	1250	5953	1211	0.22005711406013775	.	UCUCCAGGAUUUAAAUACUCGAAAAUGG	382	46	5429	13	22	84	359	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2122924-2124411	Cluster_5538	Pocillopora_meandrina_HIv1___Sc0000024	2122924	2124411	1488	10468	2013	0.051681314482231566	-	UCGACGAUCUUAAAAUCCUUUCCUUCUU	774	114	9862	54	53	157	228	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2257156-2257583	Cluster_5539	Pocillopora_meandrina_HIv1___Sc0000024	2257156	2257583	428	189	84	0.037037037037037035	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	32	6	173	3	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2388554-2388980	Cluster_5540	Pocillopora_meandrina_HIv1___Sc0000024	2388554	2388980	427	99	18	1.0	+	UGAACUACUGCUCGUACUCUAGAUAUG	40	6	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2467312-2467738	Cluster_5541	Pocillopora_meandrina_HIv1___Sc0000024	2467312	2467738	427	154	75	0.12987012987012986	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	19	1	145	0	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2584993-2585605	Cluster_5542	Pocillopora_meandrina_HIv1___Sc0000024	2584993	2585605	613	982	167	0.05295315682281059	-	UGGUAAAAUUCUGUUCAAAGUAGGUGU	154	7	851	101	5	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2627559-2627975	Cluster_5543	Pocillopora_meandrina_HIv1___Sc0000024	2627559	2627975	417	83	22	0.9879518072289156	+	AUCCCACUUCUGACACCA	45	74	8	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2629691-2630637	Cluster_5544	Pocillopora_meandrina_HIv1___Sc0000024	2629691	2630637	947	757	183	0.06737120211360634	-	UGUGACAGCUCUUUUCCUCCUGCAAAGAAG	118	22	703	10	2	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2645175-2645595	Cluster_5545	Pocillopora_meandrina_HIv1___Sc0000024	2645175	2645595	421	86	39	0.9883720930232558	+	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	12	1	79	5	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2645964-2646399	Cluster_5546	Pocillopora_meandrina_HIv1___Sc0000024	2645964	2646399	436	255	84	0.7215686274509804	.	UCUGACCAAUUAAUUAUUUUCUGUACCACA	51	3	184	1	2	19	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2695960-2697393	Cluster_5547	Pocillopora_meandrina_HIv1___Sc0000024	2695960	2697393	1434	15109	2676	0.7375736316102985	.	UGAUAGAACAAAUUCUGAUUUACAGGUG	670	132	13773	96	123	417	568	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2852508-2853971	Cluster_5548	Pocillopora_meandrina_HIv1___Sc0000024	2852508	2853971	1464	11211	1225	0.09026848630809027	-	UGCAGAUUGCCCUGACACGAAAUAUCGUC	1962	101	10130	261	201	239	279	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2854894-2855294	Cluster_5549	Pocillopora_meandrina_HIv1___Sc0000024	2854894	2855294	401	177	129	0.1751412429378531	-	UAUACCUUUGAUUCAUAGCCUUUCUGAUU	7	1	163	1	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2856088-2856516	Cluster_5550	Pocillopora_meandrina_HIv1___Sc0000024	2856088	2856516	429	414	115	0.024154589371980676	-	UGUAGAAUCAAUCUGUUACUAAGACACC	104	2	396	9	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2868577-2869002	Cluster_5551	Pocillopora_meandrina_HIv1___Sc0000024	2868577	2869002	426	231	98	0.24242424242424243	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	24	5	203	5	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2869813-2870222	Cluster_5552	Pocillopora_meandrina_HIv1___Sc0000024	2869813	2870222	410	351	193	0.2564102564102564	.	UGUUCUUUCUCUGCUGUAAUAUAUGGC	15	4	279	8	5	15	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2872254-2872681	Cluster_5553	Pocillopora_meandrina_HIv1___Sc0000024	2872254	2872681	428	202	90	0.08415841584158416	-	UAUACACGUUUAGGAUCUUCAUUUUUGA	87	1	193	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2879631-2880057	Cluster_5554	Pocillopora_meandrina_HIv1___Sc0000024	2879631	2880057	427	166	57	0.1686746987951807	-	UGUCAAAUUCUCGUCUUCCUAACCUUU	70	1	163	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2882444-2882855	Cluster_5555	Pocillopora_meandrina_HIv1___Sc0000024	2882444	2882855	412	108	44	0.4722222222222222	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	24	1	104	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2886024-2886449	Cluster_5556	Pocillopora_meandrina_HIv1___Sc0000024	2886024	2886449	426	177	76	0.01694915254237288	-	UGUUCUCUAGAUGUUGCUGACACUUGUC	17	0	170	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2888072-2888500	Cluster_5557	Pocillopora_meandrina_HIv1___Sc0000024	2888072	2888500	429	183	35	0.02185792349726776	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	81	1	181	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2888788-2889209	Cluster_5558	Pocillopora_meandrina_HIv1___Sc0000024	2888788	2889209	422	138	61	0.0	-	UCUAUCCCACCUGUAAUGAAAAAAUCUUUGU	18	0	135	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2889642-2890085	Cluster_5559	Pocillopora_meandrina_HIv1___Sc0000024	2889642	2890085	444	840	150	0.016666666666666666	-	UGUGAAACUCUGGAACUCAACAAUUCC	183	8	794	18	3	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2893306-2894396	Cluster_5560	Pocillopora_meandrina_HIv1___Sc0000024	2893306	2894396	1091	2157	469	0.11636532220676866	-	UAAUGUGAAUUUUUGGAUCAUUGGUUGUG	166	22	2064	7	6	13	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2894482-2894908	Cluster_5561	Pocillopora_meandrina_HIv1___Sc0000024	2894482	2894908	427	378	121	0.12698412698412698	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	78	2	361	3	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2904527-2905081	Cluster_5562	Pocillopora_meandrina_HIv1___Sc0000024	2904527	2905081	555	465	135	0.6301075268817204	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	56	4	432	6	1	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2909145-2911796	Cluster_5563	Pocillopora_meandrina_HIv1___Sc0000024	2909145	2911796	2652	14470	2633	0.10684174153420871	-	UUAUAUGUUUCUCUAAUUCUGCACGAGU	904	164	13511	93	82	181	439	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2912380-2914163	Cluster_5564	Pocillopora_meandrina_HIv1___Sc0000024	2912380	2914163	1784	4151	1210	0.9356781498434112	+	UGAUCUUGUAACAAUUUCCCUGUCAGA	438	58	3950	16	18	37	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2919102-2919605	Cluster_5565	Pocillopora_meandrina_HIv1___Sc0000024	2919102	2919605	504	516	252	0.34108527131782945	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	28	5	480	1	3	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2920383-2920796	Cluster_5566	Pocillopora_meandrina_HIv1___Sc0000024	2920383	2920796	414	127	43	0.0	-	UCGGAUGUCUUCCCAUAAUUUGCUUUGAGA	39	3	123	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2921044-2921472	Cluster_5567	Pocillopora_meandrina_HIv1___Sc0000024	2921044	2921472	429	123	51	0.008130081300813009	-	UGACUAACCAUGACCAAGACUGAUCAUAUU	49	2	120	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2923270-2924756	Cluster_5568	Pocillopora_meandrina_HIv1___Sc0000024	2923270	2924756	1487	131305	3136	0.00035794524199383114	-	UGCGUUUCUGGUAGACUUAUGUUUUGAAA	25357	1085	125006	723	932	1721	1838	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2925030-2926622	Cluster_5569	Pocillopora_meandrina_HIv1___Sc0000024	2925030	2926622	1593	1680	643	0.0	-	UCGGUAUUUUCUGCAAGAAACAGCAAGAGA	80	22	1610	9	12	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2927288-2927864	Cluster_5570	Pocillopora_meandrina_HIv1___Sc0000024	2927288	2927864	577	591	228	0.01353637901861252	-	UCCCGGUAAUCACUCAAAGAAUAAUGAGA	68	6	565	5	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2928128-2928571	Cluster_5571	Pocillopora_meandrina_HIv1___Sc0000024	2928128	2928571	444	2869	233	0.003485535029627048	-	UUAAGAUUAAUUGAUAGGAGAAGUAAAUU	1306	14	2798	17	6	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2928770-2929205	Cluster_5572	Pocillopora_meandrina_HIv1___Sc0000024	2928770	2929205	436	288	151	0.04861111111111111	-	UGACUAAUGAAUAUGAAAGACGGAUGCGGGU	15	6	272	4	1	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2929949-2930654	Cluster_5573	Pocillopora_meandrina_HIv1___Sc0000024	2929949	2930654	706	557	266	0.0	-	UGAUUUUAGCAGACUGGGUGGCUCCUA	54	7	531	1	4	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2930984-2932095	Cluster_5574	Pocillopora_meandrina_HIv1___Sc0000024	2930984	2932095	1112	581	255	0.0	-	UACAACCUUGACCGUUUUACCUCUGAAUAGU	32	20	531	3	5	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2932909-2934247	Cluster_5575	Pocillopora_meandrina_HIv1___Sc0000024	2932909	2934247	1339	33169	1795	0.0002713376948355392	-	UGUGGAUAAUUUAAUAACUGCAGUAAGGAUG	3722	274	29259	355	247	2525	509	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2935134-2936135	Cluster_5576	Pocillopora_meandrina_HIv1___Sc0000024	2935134	2936135	1002	81011	1470	0.00023453605065978694	-	UCAGACUCACUGAAGGUACCGCUUGAAGUA	23134	150	80584	49	67	77	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2938496-2938922	Cluster_5577	Pocillopora_meandrina_HIv1___Sc0000024	2938496	2938922	427	105	20	0.0	-	CUCUGCUGACUGCAGGACCUUCCUUGC	60	0	105	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2939249-2939713	Cluster_5578	Pocillopora_meandrina_HIv1___Sc0000024	2939249	2939713	465	5551	279	0.0003602954422626554	-	UAGACUGUUUCCGCCCGUUGUAUGUGUAC	1229	13	5516	4	6	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2939960-2940388	Cluster_5579	Pocillopora_meandrina_HIv1___Sc0000024	2939960	2940388	429	130	46	0.0	-	UGGACUUUGAACCGCAGACCAUGCUGUUUG	23	2	128	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2940579-2941092	Cluster_5580	Pocillopora_meandrina_HIv1___Sc0000024	2940579	2941092	514	485	205	0.0	-	UCAGGUCUGUCUUCCUCUGCUACAAGC	26	2	469	2	0	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2943422-2943998	Cluster_5581	Pocillopora_meandrina_HIv1___Sc0000024	2943422	2943998	577	324	126	0.0	-	UGUUUGACUGCACAAUUCCUUACUGCACA	41	5	307	2	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2944852-2946315	Cluster_5582	Pocillopora_meandrina_HIv1___Sc0000024	2944852	2946315	1464	5995	1049	0.00316930775646372	-	UCUUUGUUUACCCCAGUUCUGUUUAACU	511	45	5760	16	23	63	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2946412-2947417	Cluster_5583	Pocillopora_meandrina_HIv1___Sc0000024	2946412	2947417	1006	3067	637	0.00097815454841865	-	UGUGUCUUUGCCAGUGUGCAACUCUGUGCUC	182	19	2979	7	8	26	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2947616-2948039	Cluster_5584	Pocillopora_meandrina_HIv1___Sc0000024	2947616	2948039	424	107	54	0.0	-	UGAUAUUUUAACUUUCAUUUUAGUAGUGC	10	1	94	0	2	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2948126-2948556	Cluster_5585	Pocillopora_meandrina_HIv1___Sc0000024	2948126	2948556	431	266	108	0.0	-	AAAGAGCUGAUUUGUUAUUGAAGGUUAAC	25	5	258	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2949353-2950434	Cluster_5586	Pocillopora_meandrina_HIv1___Sc0000024	2949353	2950434	1082	2262	383	0.01989389920424403	-	AGGUAUAGGUUACUCAAGAUUAAUUGAU	220	11	2149	26	4	13	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2951219-2951636	Cluster_5587	Pocillopora_meandrina_HIv1___Sc0000024	2951219	2951636	418	180	101	0.0	-	UGGAGUCUCUUCCCUGUUCUCUGCUUAAG	14	2	167	0	2	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2951808-2952697	Cluster_5588	Pocillopora_meandrina_HIv1___Sc0000024	2951808	2952697	890	946	300	0.0021141649048625794	-	UGGUUCACUUCUUUAGCACACACAUCAAGA	93	21	898	4	4	13	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2953520-2955247	Cluster_5589	Pocillopora_meandrina_HIv1___Sc0000024	2953520	2955247	1728	15678	1415	0.0004464855211123868	-	UGAUUAAGCUCCUCUAGUUCUCGGCAGC	2441	130	14740	56	158	440	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2955585-2956354	Cluster_5590	Pocillopora_meandrina_HIv1___Sc0000024	2955585	2956354	770	1022	382	0.003913894324853229	-	UAAGACAAAUGGGGCUUAUGGCAAUGACC	121	12	985	3	10	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2956919-2957505	Cluster_5591	Pocillopora_meandrina_HIv1___Sc0000024	2956919	2957505	587	474	209	0.0	-	UGUGAUUUGUUAUUACCUAUGGUGGGAUU	33	4	455	0	4	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2957673-2959754	Cluster_5592	Pocillopora_meandrina_HIv1___Sc0000024	2957673	2959754	2082	4411	1272	0.0022670596236681025	-	AGCAGCAAAUCACACUACGUGCACUCAAC	696	54	4240	10	27	36	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2961625-2962054	Cluster_5593	Pocillopora_meandrina_HIv1___Sc0000024	2961625	2962054	430	418	101	0.007177033492822967	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	162	2	414	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2962808-2963480	Cluster_5594	Pocillopora_meandrina_HIv1___Sc0000024	2962808	2963480	673	2170	640	0.12672811059907835	-	UGUGCGUGUUUUCACUGCGGCGACUGUCGC	210	47	1827	24	22	63	187	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2964138-2964604	Cluster_5595	Pocillopora_meandrina_HIv1___Sc0000024	2964138	2964604	467	415	231	0.0	-	UGUGCGUUUCCCCUGCAGAGGACUUUGU	19	7	394	1	4	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3011473-3012013	Cluster_5596	Pocillopora_meandrina_HIv1___Sc0000024	3011473	3012013	541	182	29	0.9340659340659341	+	UAGGAAAUAAAAAACGGAGAAGCAAUUA	45	2	172	5	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3012455-3012893	Cluster_5597	Pocillopora_meandrina_HIv1___Sc0000024	3012455	3012893	439	356	162	0.033707865168539325	-	UGAAUUCUGCCAGAAUCUCUUCGUCUGUC	25	1	340	9	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3026184-3026614	Cluster_5598	Pocillopora_meandrina_HIv1___Sc0000024	3026184	3026614	431	1148	8	0.0017421602787456446	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	1123	0	1145	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3303903-3304324	Cluster_5599	Pocillopora_meandrina_HIv1___Sc0000024	3303903	3304324	422	153	69	0.6470588235294118	.	UACGUUGGUAAUAUUUUGCUUCUCGGCA	24	2	143	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3340389-3340814	Cluster_5600	Pocillopora_meandrina_HIv1___Sc0000024	3340389	3340814	426	2686	126	0.0014892032762472078	-	UCUCUCAUUGCUUUGCACGAAUUAG	1318	43	2279	14	16	322	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3341706-3342134	Cluster_5601	Pocillopora_meandrina_HIv1___Sc0000024	3341706	3342134	429	587	26	0.0	-	UGAACUCUUGAACAGUCAUGUGUG	273	8	105	6	178	17	273	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3418564-3421305	Cluster_5602	Pocillopora_meandrina_HIv1___Sc0000024	3418564	3421305	2742	9773	1959	0.9762611275964391	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1597	77	9337	21	74	136	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3513702-3514143	Cluster_5603	Pocillopora_meandrina_HIv1___Sc0000024	3513702	3514143	442	313	241	0.09584664536741214	-	GAAGAGACAAGGUCGCACUCUGUACGGCUU	7	87	150	30	22	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3537929-3538348	Cluster_5604	Pocillopora_meandrina_HIv1___Sc0000024	3537929	3538348	420	74	23	1.0	+	CAGCUGGUGCUCAGUUAGGUUAGU	37	0	6	9	1	5	53	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3627744-3628216	Cluster_5605	Pocillopora_meandrina_HIv1___Sc0000024	3627744	3628216	473	2656	188	0.9631024096385542	+	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	1429	4	2633	1	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3838747-3839209	Cluster_5606	Pocillopora_meandrina_HIv1___Sc0000024	3838747	3839209	463	469	138	0.8123667377398721	+	UAGUCGACUGAAUUGCUCCGUGUAAGAGG	46	11	419	4	2	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3842999-3843425	Cluster_5607	Pocillopora_meandrina_HIv1___Sc0000024	3842999	3843425	427	167	94	0.9101796407185628	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	22	1	154	2	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3896905-3898219	Cluster_5608	Pocillopora_meandrina_HIv1___Sc0000024	3896905	3898219	1315	5101	602	0.015095079396196824	-	UAUGAUCUUACAAGAACUGAACUGUGUA	844	5	5047	1	3	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4039267-4039915	Cluster_5609	Pocillopora_meandrina_HIv1___Sc0000024	4039267	4039915	649	551	236	0.7078039927404719	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	34	2	502	0	4	18	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4056716-4057308	Cluster_5610	Pocillopora_meandrina_HIv1___Sc0000024	4056716	4057308	593	5366	556	0.6746179649645919	.	UCGACAUCGUCAAUGCACUCUUUGCGCG	379	92	4104	69	25	92	984	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4058901-4059330	Cluster_5611	Pocillopora_meandrina_HIv1___Sc0000024	4058901	4059330	430	2880	83	0.9864583333333333	+	UGAAUGCUGGUAUCUUGAUAGUAGAACA	2543	0	2880	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4078778-4079178	Cluster_5612	Pocillopora_meandrina_HIv1___Sc0000024	4078778	4079178	401	91	37	0.5494505494505495	.	UAUGAUCAAAUUGUUAGUAUUGAAUAAGUU	20	3	87	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4083653-4086648	Cluster_5613	Pocillopora_meandrina_HIv1___Sc0000024	4083653	4086648	2996	21163	3472	0.10305722251098616	-	UGAUUUCCACUGAUCGGCUGUGAAGCCCC	1100	142	19128	86	213	438	1156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4093656-4094411	Cluster_5614	Pocillopora_meandrina_HIv1___Sc0000024	4093656	4094411	756	6628	684	0.5687990343995172	.	CCUCUUCUUAUUGGGAUGUGUACUCUUUC	1328	33	6326	28	31	83	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4106585-4107398	Cluster_5615	Pocillopora_meandrina_HIv1___Sc0000024	4106585	4107398	814	430	234	0.9162790697674419	+	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	16	3	400	5	0	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4127709-4128274	Cluster_5616	Pocillopora_meandrina_HIv1___Sc0000024	4127709	4128274	566	558	176	0.946236559139785	+	UGAUUAGAAUCGGGAACAACCA	91	1	436	4	96	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4161863-4162312	Cluster_5617	Pocillopora_meandrina_HIv1___Sc0000024	4161863	4162312	450	672	222	0.10119047619047619	-	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	118	6	605	3	7	11	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4163088-4163523	Cluster_5618	Pocillopora_meandrina_HIv1___Sc0000024	4163088	4163523	436	234	83	0.0811965811965812	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	52	2	215	0	0	14	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4164810-4165236	Cluster_5619	Pocillopora_meandrina_HIv1___Sc0000024	4164810	4165236	427	176	96	0.13068181818181818	-	UGCUACAUAAUCUUCGACAUCUUUGUUC	20	0	163	1	2	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4165579-4166007	Cluster_5620	Pocillopora_meandrina_HIv1___Sc0000024	4165579	4166007	429	628	183	0.01592356687898089	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	149	0	613	2	2	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4169298-4169705	Cluster_5621	Pocillopora_meandrina_HIv1___Sc0000024	4169298	4169705	408	208	114	0.6201923076923077	.	UGUGACACUUUGAGACACUCGUGAGACA	13	7	185	2	2	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4201926-4202459	Cluster_5622	Pocillopora_meandrina_HIv1___Sc0000024	4201926	4202459	534	625	166	0.008	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	91	3	610	0	0	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4207681-4208168	Cluster_5623	Pocillopora_meandrina_HIv1___Sc0000024	4207681	4208168	488	505	167	0.8792079207920792	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	140	2	492	4	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4208466-4208893	Cluster_5624	Pocillopora_meandrina_HIv1___Sc0000024	4208466	4208893	428	136	42	0.9485294117647058	+	UGGAAUUCGAAGCAAGUAACAAUGGACA	28	2	120	6	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4211041-4211469	Cluster_5625	Pocillopora_meandrina_HIv1___Sc0000024	4211041	4211469	429	323	78	0.015479876160990712	-	UAGGACAACUGAGAAUCCACGUAGACUC	111	1	311	0	7	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4472787-4473204	Cluster_5626	Pocillopora_meandrina_HIv1___Sc0000024	4472787	4473204	418	128	10	0.0078125	-	GAAGUUCUGGUUUAAAAA	116	124	2	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4490178-4490607	Cluster_5627	Pocillopora_meandrina_HIv1___Sc0000024	4490178	4490607	430	223	93	0.9910313901345291	+	UACAAUGAAUACUGUUCCAGAAUUAAGGGC	52	2	211	3	2	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4543521-4543968	Cluster_5628	Pocillopora_meandrina_HIv1___Sc0000024	4543521	4543968	448	1998	196	0.026526526526526525	-	CGAUCCAACAAGAACAAUAUGUGCAGACU	418	10	1880	8	3	22	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4629024-4629867	Cluster_5629	Pocillopora_meandrina_HIv1___Sc0000024	4629024	4629867	844	1490	871	0.9986577181208054	+	UAGGGUUGCCCCAGAGGAACA	16	460	608	129	111	91	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4630626-4631873	Cluster_5630	Pocillopora_meandrina_HIv1___Sc0000024	4630626	4631873	1248	4055	2251	1.0	+	ACCGACUACUUGAUGAAGAUCUUGAC	39	998	1710	323	387	302	335	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4692847-4693265	Cluster_5631	Pocillopora_meandrina_HIv1___Sc0000024	4692847	4693265	419	101	34	0.0	-	AAAGGAAUUAGGACUCUGG	14	42	34	5	5	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4699114-4699771	Cluster_5632	Pocillopora_meandrina_HIv1___Sc0000024	4699114	4699771	658	2909	263	0.946029563423857	+	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	550	1	2875	6	5	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4808666-4808760	Cluster_5633	Pocillopora_meandrina_HIv1___Sc0000024	4808666	4808760	95	3154	144	1.0	+	AGAACCCAAGAAUCUCGA	894	2822	1	301	26	3	1	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000024:4920463-4920901	Cluster_5634	Pocillopora_meandrina_HIv1___Sc0000024	4920463	4920901	439	309	139	0.6731391585760518	.	UACUGCAUUUUGGAAAGCUUCGGCUCA	37	13	267	4	1	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4986860-4987297	Cluster_5635	Pocillopora_meandrina_HIv1___Sc0000024	4986860	4987297	438	422	104	0.933649289099526	+	UCUUCCACUGAUCGUUGAGUUGAAGACUG	71	9	370	15	4	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5009879-5010307	Cluster_5636	Pocillopora_meandrina_HIv1___Sc0000024	5009879	5010307	429	195	98	0.09230769230769231	-	UGAACGUAUAGCCAUCCAGUUGAACUUG	17	1	189	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5010321-5010742	Cluster_5637	Pocillopora_meandrina_HIv1___Sc0000024	5010321	5010742	422	158	104	0.22151898734177214	.	UGACUUUAACACUAUAAACAUUCUGAGG	12	1	142	2	6	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5029510-5029936	Cluster_5638	Pocillopora_meandrina_HIv1___Sc0000024	5029510	5029936	427	121	42	0.9669421487603306	+	UGAUCCAACAAGAACAAUAUGUGCUGA	36	0	115	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5042981-5043407	Cluster_5639	Pocillopora_meandrina_HIv1___Sc0000024	5042981	5043407	427	176	65	0.6761363636363636	.	UAGGAUAUAUCACUUGCGUAAUUUACAACA	34	14	145	6	4	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5153232-5153738	Cluster_5640	Pocillopora_meandrina_HIv1___Sc0000024	5153232	5153738	507	562	263	0.28291814946619215	.	UGUUCUCGGUUAUCAGCUCAGAAAUGCA	25	24	461	8	7	15	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5154716-5155141	Cluster_5641	Pocillopora_meandrina_HIv1___Sc0000024	5154716	5155141	426	102	39	0.0196078431372549	-	UGUGUAGAUAUGUCUUUUGGACAGGA	28	1	100	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5206554-5207098	Cluster_5642	Pocillopora_meandrina_HIv1___Sc0000024	5206554	5207098	545	2412	328	1.0	+	UAGCAUUGUCGGUAUCUGCAGCU	637	140	598	55	120	1411	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5274612-5275041	Cluster_5643	Pocillopora_meandrina_HIv1___Sc0000024	5274612	5275041	430	308	66	0.8863636363636364	+	UUCUGGUUAUCUUGCGAGAAUUUUGUCACC	87	11	276	9	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:32568-33061	Cluster_5644	Pocillopora_meandrina_HIv1___Sc0000025	32568	33061	494	304	85	0.006578947368421052	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	52	0	302	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:52012-52437	Cluster_5645	Pocillopora_meandrina_HIv1___Sc0000025	52012	52437	426	144	44	0.1875	-	UACUGAACUGGCUAGGAUUUGUGCA	23	2	127	0	0	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:52665-53245	Cluster_5646	Pocillopora_meandrina_HIv1___Sc0000025	52665	53245	581	371	155	0.22641509433962265	.	UGAACGAUCCAUUUCAGCCACGGCUAAAGUA	17	1	341	1	8	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:57453-62607	Cluster_5647	Pocillopora_meandrina_HIv1___Sc0000025	57453	62607	5155	26221	5486	0.0911101788642691	-	UGUAUUGUUGAAUCUUCUGGUUUGUCGA	1273	450	24016	197	315	496	747	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:65003-65609	Cluster_5648	Pocillopora_meandrina_HIv1___Sc0000025	65003	65609	607	216	65	0.1111111111111111	-	UCGUCUCACGGGCUGCCAAGCGAUGCGG	42	3	183	3	5	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:65671-66099	Cluster_5649	Pocillopora_meandrina_HIv1___Sc0000025	65671	66099	429	226	41	0.004424778761061947	-	UUGGUCAUAAAGCACAUGAAGAACCGC	56	3	222	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:81390-81833	Cluster_5650	Pocillopora_meandrina_HIv1___Sc0000025	81390	81833	444	869	168	0.18642117376294592	-	UCCAGAUCGUUAAGAAAUAUAUUGAACA	232	6	776	2	7	12	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:85045-85465	Cluster_5651	Pocillopora_meandrina_HIv1___Sc0000025	85045	85465	421	111	35	0.02702702702702703	-	UCAAAACCUUGUUGGCUGUAUUCUCUCAUC	41	0	105	0	5	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:120662-121156	Cluster_5652	Pocillopora_meandrina_HIv1___Sc0000025	120662	121156	495	1586	222	0.005044136191677175	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	384	1	1565	6	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:132328-132758	Cluster_5653	Pocillopora_meandrina_HIv1___Sc0000025	132328	132758	431	173	64	0.0	-	UGCCUCUUAUAAAACAUAUCGUUAUGCUGUA	59	3	165	2	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:133277-133808	Cluster_5654	Pocillopora_meandrina_HIv1___Sc0000025	133277	133808	532	1344	357	0.013392857142857142	-	UGAAGGAACGUGUGGCCCCUCACGAGGUA	80	2	1308	3	5	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:134251-134678	Cluster_5655	Pocillopora_meandrina_HIv1___Sc0000025	134251	134678	428	206	69	0.038834951456310676	-	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	40	0	194	0	2	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:137916-138621	Cluster_5656	Pocillopora_meandrina_HIv1___Sc0000025	137916	138621	706	564	231	0.35815602836879434	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	58	6	536	0	2	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:139242-140097	Cluster_5657	Pocillopora_meandrina_HIv1___Sc0000025	139242	140097	856	1290	225	0.9100775193798449	+	CGUGUACGACGCCUCUGCCCGAGCUUCAG	362	5	1250	11	1	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:141460-141886	Cluster_5658	Pocillopora_meandrina_HIv1___Sc0000025	141460	141886	427	189	88	0.24338624338624337	.	UCACGAAUCUUUGCCAUUGUGAGGCUCACU	16	4	169	0	1	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:142044-142474	Cluster_5659	Pocillopora_meandrina_HIv1___Sc0000025	142044	142474	431	362	182	0.3453038674033149	.	UACGUCUAGUAUAACCUCCUCUAACUC	21	7	300	3	4	31	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:142480-142913	Cluster_5660	Pocillopora_meandrina_HIv1___Sc0000025	142480	142913	434	274	140	0.1897810218978102	-	UCUAACGGAUACAGCUGCUGUACUGCU	17	20	237	0	5	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:151855-152280	Cluster_5661	Pocillopora_meandrina_HIv1___Sc0000025	151855	152280	426	195	32	0.005128205128205128	-	UCAGAAUCAAAUUUUUAGCAGUGGGU	95	1	192	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:152606-153036	Cluster_5662	Pocillopora_meandrina_HIv1___Sc0000025	152606	153036	431	272	16	0.011029411764705883	-	UCAGCUCCAUAUCUUGUUUAACAUCUUAAAC	185	0	271	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:153609-154122	Cluster_5663	Pocillopora_meandrina_HIv1___Sc0000025	153609	154122	514	499	67	0.0	-	UCAAAUGACUGUAGUCUCCAGUGCCAAGACU	107	4	495	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:159877-160308	Cluster_5664	Pocillopora_meandrina_HIv1___Sc0000025	159877	160308	432	2170	44	0.0	-	UCCAGAACUUUUUCACGACCCAAAUGUGGUA	1215	4	2161	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:174243-174676	Cluster_5665	Pocillopora_meandrina_HIv1___Sc0000025	174243	174676	434	503	70	0.009940357852882704	-	AACUACUGCUCGUGCUCUAGAUAUGACA	125	14	483	0	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:177567-177986	Cluster_5666	Pocillopora_meandrina_HIv1___Sc0000025	177567	177986	420	101	36	0.0	-	AAACUGUCUCAUUUCUGUGCGGAUCAUG	23	20	78	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:189065-189920	Cluster_5667	Pocillopora_meandrina_HIv1___Sc0000025	189065	189920	856	2542	638	0.04838709677419355	-	UCUUCAACAUGGACAGGCGAGUUAUCUAUC	261	32	2335	17	32	53	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:189972-190401	Cluster_5668	Pocillopora_meandrina_HIv1___Sc0000025	189972	190401	430	1108	40	0.005415162454873646	-	UCGGGCUUCUUAGCUUUCAAGUCUUUGGGA	541	1	1101	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:197269-197991	Cluster_5669	Pocillopora_meandrina_HIv1___Sc0000025	197269	197991	723	1588	234	0.015113350125944584	-	UGGAAAGUUCUCUGGUAUGCGAGUCAGC	445	13	1536	10	3	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:198895-199356	Cluster_5670	Pocillopora_meandrina_HIv1___Sc0000025	198895	199356	462	1347	148	0.0007423904974016332	-	UGUUGUGGUUUAGGCGUUCUGUAUCUCUAC	267	2	1322	5	2	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:200022-200444	Cluster_5671	Pocillopora_meandrina_HIv1___Sc0000025	200022	200444	423	265	68	0.03018867924528302	-	UCGGUAUAGCUUUCAAAACAGUC	99	2	150	0	2	109	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:215224-215973	Cluster_5672	Pocillopora_meandrina_HIv1___Sc0000025	215224	215973	750	2664	279	0.01951951951951952	-	UCAAUGCUUCUUGUCUGUACCAUCUGUGC	878	4	2647	1	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:309386-309814	Cluster_5673	Pocillopora_meandrina_HIv1___Sc0000025	309386	309814	429	198	44	0.04040404040404041	-	GCCCGACUAGCUCAGUCGGUAGAGCAUGA	83	2	192	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:595824-596251	Cluster_5674	Pocillopora_meandrina_HIv1___Sc0000025	595824	596251	428	276	77	0.9130434782608695	+	UGAAACUCUGAUCUGAAAAUAUUUUC	61	15	219	8	4	15	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:664697-665127	Cluster_5675	Pocillopora_meandrina_HIv1___Sc0000025	664697	665127	431	1868	141	0.0	-	UCACUCGUAAGUGGUCGCUCGUAAAUACGU	567	7	1801	14	10	30	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:721626-722045	Cluster_5676	Pocillopora_meandrina_HIv1___Sc0000025	721626	722045	420	154	88	0.9415584415584416	+	UCGGGCUAUGUAAACACGGA	15	96	16	23	11	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:733529-733950	Cluster_5677	Pocillopora_meandrina_HIv1___Sc0000025	733529	733950	422	183	110	0.11475409836065574	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	19	1	176	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:787805-788233	Cluster_5678	Pocillopora_meandrina_HIv1___Sc0000025	787805	788233	429	95	19	0.9894736842105263	+	ACUGGUACAAACAAGGGUCGCGUAGCCUUU	43	1	92	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:816222-816776	Cluster_5679	Pocillopora_meandrina_HIv1___Sc0000025	816222	816776	555	2744	519	0.9624635568513119	+	UAUUGUAUCUGAUGUUUUCAAUGGUGUA	434	20	2588	11	17	30	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:816830-817507	Cluster_5680	Pocillopora_meandrina_HIv1___Sc0000025	816830	817507	678	8250	540	0.9975757575757576	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2199	2	8108	9	53	35	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:884368-885556	Cluster_5681	Pocillopora_meandrina_HIv1___Sc0000025	884368	885556	1189	14231	1194	0.021502354015880822	-	UUUGUAGGCUCUAACAGUACAUUGUU	4497	184	13747	43	48	79	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:896573-897169	Cluster_5682	Pocillopora_meandrina_HIv1___Sc0000025	896573	897169	597	5621	491	0.9967977228251201	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	868	9	5572	1	5	7	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1160970-1161596	Cluster_5683	Pocillopora_meandrina_HIv1___Sc0000025	1160970	1161596	627	879	148	0.02957906712172924	-	UCCUUUGACUGAUACUCAACUUUCGAUAUC	362	2	866	2	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1169802-1170231	Cluster_5684	Pocillopora_meandrina_HIv1___Sc0000025	1169802	1170231	430	119	22	0.0	-	ACUGGUACAAACAAGGGUCGCGUAGCCUUU	55	1	116	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1275199-1275628	Cluster_5685	Pocillopora_meandrina_HIv1___Sc0000025	1275199	1275628	430	331	62	0.03927492447129909	-	UCCUUUGACUGAUACUCAACUUUCGAUAUC	185	1	326	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1324924-1325353	Cluster_5686	Pocillopora_meandrina_HIv1___Sc0000025	1324924	1325353	430	272	73	0.022058823529411766	-	UAAGGAUCUCAAGGCGAAUAAAGCAAAG	52	6	258	2	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1480405-1481711	Cluster_5687	Pocillopora_meandrina_HIv1___Sc0000025	1480405	1481711	1307	1606	599	0.021793275217932753	-	UAUCUGUUACGUCAUCAAAUUAUAAUGCAC	153	8	1544	4	7	18	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1483450-1483947	Cluster_5688	Pocillopora_meandrina_HIv1___Sc0000025	1483450	1483947	498	261	132	0.01532567049808429	-	UAUGAUACAUCUUCUUUACGUCUCCGAU	18	0	256	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1486012-1486435	Cluster_5689	Pocillopora_meandrina_HIv1___Sc0000025	1486012	1486435	424	212	123	0.0047169811320754715	-	UAAUAAGCUUGGAAAGUAGUCUCGAGUCCA	10	1	208	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1486636-1487065	Cluster_5690	Pocillopora_meandrina_HIv1___Sc0000025	1486636	1487065	430	1221	129	0.005733005733005733	-	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	579	13	1054	0	1	4	149	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1777995-1778415	Cluster_5691	Pocillopora_meandrina_HIv1___Sc0000025	1777995	1778415	421	151	80	0.6556291390728477	.	UCUUAAAAAUGCUGCCCUCGGC	32	46	3	31	63	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2071414-2071843	Cluster_5692	Pocillopora_meandrina_HIv1___Sc0000025	2071414	2071843	430	274	97	0.9963503649635036	+	UGCCUCAAUUAUUUGUUUCCACUGUUGAUC	118	2	263	0	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2075374-2075803	Cluster_5693	Pocillopora_meandrina_HIv1___Sc0000025	2075374	2075803	430	269	70	1.0	+	UACGAGUACGUGGCUCAGAAUUUCCCUUGG	49	2	263	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2231869-2232298	Cluster_5694	Pocillopora_meandrina_HIv1___Sc0000025	2231869	2232298	430	98	31	0.9897959183673469	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	23	0	96	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2234954-2235827	Cluster_5695	Pocillopora_meandrina_HIv1___Sc0000025	2234954	2235827	874	523	260	0.9139579349904398	+	UAACUGUACUCUUGAAAUUCAUCGAUGC	20	8	496	2	3	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2369398-2369823	Cluster_5696	Pocillopora_meandrina_HIv1___Sc0000025	2369398	2369823	426	297	56	0.9966329966329966	+	CGCGGAAAGAGGAGAAAUUGCACU	49	18	145	3	8	2	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2646833-2647260	Cluster_5697	Pocillopora_meandrina_HIv1___Sc0000025	2646833	2647260	428	178	63	0.9550561797752809	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	54	20	138	9	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2974458-2974886	Cluster_5698	Pocillopora_meandrina_HIv1___Sc0000025	2974458	2974886	429	243	17	0.0823045267489712	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	189	0	242	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3200804-3201225	Cluster_5699	Pocillopora_meandrina_HIv1___Sc0000025	3200804	3201225	422	123	68	0.24390243902439024	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	7	1	98	0	5	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3256637-3257056	Cluster_5700	Pocillopora_meandrina_HIv1___Sc0000025	3256637	3257056	420	86	45	0.05813953488372093	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	16	2	81	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3258105-3258783	Cluster_5701	Pocillopora_meandrina_HIv1___Sc0000025	3258105	3258783	679	630	207	0.047619047619047616	-	UCAUCUCCGAGGCUGUUGUAUCAUCAAC	62	7	601	2	4	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3395192-3395616	Cluster_5702	Pocillopora_meandrina_HIv1___Sc0000025	3395192	3395616	425	115	30	0.808695652173913	+	UGGAUUUUCCUCUACAUCGUUUGCU	81	2	108	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3421163-3421658	Cluster_5703	Pocillopora_meandrina_HIv1___Sc0000025	3421163	3421658	496	706	94	0.7776203966005666	.	UGAGAUAUGAAUUAAAAACUGAAUGUGG	108	1	686	1	7	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3587727-3588154	Cluster_5704	Pocillopora_meandrina_HIv1___Sc0000025	3587727	3588154	428	348	81	0.985632183908046	+	UUGUGAUGGAGGCGAUGAGCAGUG	74	11	190	3	7	19	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3682065-3682492	Cluster_5705	Pocillopora_meandrina_HIv1___Sc0000025	3682065	3682492	428	144	57	1.0	+	UAUCAAGUAGAGAUGUCUGAGCCCGAUG	22	0	142	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3683401-3683929	Cluster_5706	Pocillopora_meandrina_HIv1___Sc0000025	3683401	3683929	529	1332	332	0.9722222222222222	+	UUUUCGGCUACUUCUGUCCAUUUUUUGGC	132	7	1300	0	3	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3694598-3695092	Cluster_5707	Pocillopora_meandrina_HIv1___Sc0000025	3694598	3695092	495	248	123	0.875	+	UUAAGGAGCAGAUUUCAAGCUGAGGACGG	16	11	229	3	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3699216-3700043	Cluster_5708	Pocillopora_meandrina_HIv1___Sc0000025	3699216	3700043	828	552	395	0.009057971014492754	-	CACAUGACGAUCUGUACGUGAGCU	12	93	252	56	37	41	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4002468-4002889	Cluster_5709	Pocillopora_meandrina_HIv1___Sc0000025	4002468	4002889	422	105	17	0.0	-	AAGACUACAAAUUGCACAUGCC	50	4	4	8	75	12	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4039565-4039984	Cluster_5710	Pocillopora_meandrina_HIv1___Sc0000025	4039565	4039984	420	97	2	1.0	+	GGUGGGCUGUUGGAUCUUGA	96	97	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4070277-4070820	Cluster_5711	Pocillopora_meandrina_HIv1___Sc0000025	4070277	4070820	544	501	231	0.9321357285429142	+	UGAAUUCUUCGUAAACGGUUUCCUGGUC	77	4	480	3	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4072238-4072677	Cluster_5712	Pocillopora_meandrina_HIv1___Sc0000025	4072238	4072677	440	331	176	0.2084592145015106	.	UACGUUGCUUGACCUCAUCAUUUUUGG	22	6	307	2	2	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4072924-4073324	Cluster_5713	Pocillopora_meandrina_HIv1___Sc0000025	4072924	4073324	401	72	31	0.05555555555555555	-	UACGAUCUGUCGGCUUUCCAGGGCUUUU	12	0	71	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4077666-4078088	Cluster_5714	Pocillopora_meandrina_HIv1___Sc0000025	4077666	4078088	423	130	71	0.7461538461538462	.	UCGGUUCUUCAAUGCUACUGCUCCAACU	11	5	113	2	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4114969-4115399	Cluster_5715	Pocillopora_meandrina_HIv1___Sc0000025	4114969	4115399	431	466	106	0.2510729613733906	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	180	2	448	4	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4342566-4342989	Cluster_5716	Pocillopora_meandrina_HIv1___Sc0000025	4342566	4342989	424	95	34	0.9368421052631579	+	CGAUGGAUAAAAAGGAGAUCACGG	30	1	36	0	2	6	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4472859-4473281	Cluster_5717	Pocillopora_meandrina_HIv1___Sc0000025	4472859	4473281	423	299	43	0.026755852842809364	-	UUCGCGUCUGAAGCUGUUAGAGU	116	16	7	3	65	200	8	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4554604-4555029	Cluster_5718	Pocillopora_meandrina_HIv1___Sc0000025	4554604	4555029	426	83	16	0.012048192771084338	-	UUCAAUGUGAAAAGUUUAUUUAGGAUGA	50	0	82	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4762569-4763127	Cluster_5719	Pocillopora_meandrina_HIv1___Sc0000025	4762569	4763127	559	411	215	0.5255474452554745	.	AAUACAAGCAAAGGAGUUAGAAAAUCACGA	21	8	358	2	8	6	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4764352-4765953	Cluster_5720	Pocillopora_meandrina_HIv1___Sc0000025	4764352	4765953	1602	1838	679	0.18607181719260066	-	UGAGUCUUGGAUUGAAGUACGACAUCACGUG	91	15	1676	8	7	48	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4766196-4766830	Cluster_5721	Pocillopora_meandrina_HIv1___Sc0000025	4766196	4766830	635	780	186	0.03333333333333333	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	85	3	765	2	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5014489-5014908	Cluster_5722	Pocillopora_meandrina_HIv1___Sc0000025	5014489	5014908	420	1372	56	0.0	-	AUCCCACUCCUGACACCA	395	1368	0	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5091292-5091963	Cluster_5723	Pocillopora_meandrina_HIv1___Sc0000025	5091292	5091963	672	1110	318	0.5261261261261261	.	UUUCUUCGAAAACGUGGCAAUCCGUGAUA	124	25	926	8	20	16	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5092916-5093743	Cluster_5724	Pocillopora_meandrina_HIv1___Sc0000025	5092916	5093743	828	995	258	0.4623115577889447	.	UAUUUUCUUCUGGUGGUUGAUGUCCUC	154	10	946	2	7	7	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5093750-5094173	Cluster_5725	Pocillopora_meandrina_HIv1___Sc0000025	5093750	5094173	424	223	84	0.852017937219731	+	AUUCAUGUUAGGUGGUAGAGGUGU	52	2	90	5	10	31	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5095175-5095865	Cluster_5726	Pocillopora_meandrina_HIv1___Sc0000025	5095175	5095865	691	6607	432	0.07143938247313456	-	UUCAUACGGCUUCUAGAAUUUAUCCAGU	3141	51	6212	31	21	50	242	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5098043-5098471	Cluster_5727	Pocillopora_meandrina_HIv1___Sc0000025	5098043	5098471	429	150	52	0.8933333333333333	+	AGCAAGGGCACUUUUGUAAGAGAUUUUGG	27	7	133	2	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5110648-5111424	Cluster_5728	Pocillopora_meandrina_HIv1___Sc0000025	5110648	5111424	777	266	38	0.9887218045112782	+	UUGGACUGUGCAUAACCAUUUGC	117	0	115	0	5	140	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5219139-5219559	Cluster_5729	Pocillopora_meandrina_HIv1___Sc0000025	5219139	5219559	421	151	83	0.6158940397350994	.	UUCACCAUACGGACCGACCCUUU	17	51	7	31	33	23	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5246768-5247196	Cluster_5730	Pocillopora_meandrina_HIv1___Sc0000025	5246768	5247196	429	423	118	0.0425531914893617	-	UGUAGAAUCAAUCUGUUACUAAGACACC	92	3	406	5	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5293601-5294031	Cluster_5731	Pocillopora_meandrina_HIv1___Sc0000025	5293601	5294031	431	747	138	0.9143239625167336	+	UUCAUGCUCUCGUUGUUCGACUGAACG	139	0	720	5	3	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5305154-5306148	Cluster_5732	Pocillopora_meandrina_HIv1___Sc0000025	5305154	5306148	995	1785	468	0.07058823529411765	-	UGAUAUUGUUGUCACAGAUACUUGAAAACA	246	19	1707	7	6	20	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5402913-5403340	Cluster_5733	Pocillopora_meandrina_HIv1___Sc0000025	5402913	5403340	428	194	78	0.9587628865979382	+	UGCGUGUUCUCAUUUCGGGUUGGUGAUC	25	4	184	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5405399-5405839	Cluster_5734	Pocillopora_meandrina_HIv1___Sc0000025	5405399	5405839	441	325	128	0.9323076923076923	+	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	23	3	301	2	2	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5406058-5406570	Cluster_5735	Pocillopora_meandrina_HIv1___Sc0000025	5406058	5406570	513	199	102	0.9597989949748744	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	26	0	188	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5406912-5407702	Cluster_5736	Pocillopora_meandrina_HIv1___Sc0000025	5406912	5407702	791	12702	1371	0.8865532986931192	+	UAAUGAAGUCGUAAUUUGUCCAUCC	3094	89	11958	19	380	108	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:166158-166685	Cluster_5737	Pocillopora_meandrina_HIv1___Sc0000026	166158	166685	528	294	126	0.07482993197278912	-	UCGGCAACAACUGGAGUAAAAAAUUCGGGA	35	5	266	5	1	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:282952-283847	Cluster_5738	Pocillopora_meandrina_HIv1___Sc0000026	282952	283847	896	1225	314	0.5755102040816327	.	UGAUAAGAAAGACAUAAGAAGUUUUGG	132	13	1122	14	12	11	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:288092-289261	Cluster_5739	Pocillopora_meandrina_HIv1___Sc0000026	288092	289261	1170	2062	538	0.17119301648884577	-	AUGAGCGAUAUCGCAGAACAGCUGCUGAG	236	64	1935	10	11	15	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:525538-527015	Cluster_5740	Pocillopora_meandrina_HIv1___Sc0000026	525538	527015	1478	3560	474	0.11067415730337078	-	UGUCAAGUAACCAAGCUUUUUCAAGACUGUU	475	14	3255	23	6	50	212	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:527039-527466	Cluster_5741	Pocillopora_meandrina_HIv1___Sc0000026	527039	527466	428	383	74	0.015665796344647518	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	205	2	375	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:571894-572312	Cluster_5742	Pocillopora_meandrina_HIv1___Sc0000026	571894	572312	419	191	133	1.0	+	UGACUGCUCAACUAGCUAUGGAAAU	10	65	67	10	25	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:573348-574087	Cluster_5743	Pocillopora_meandrina_HIv1___Sc0000026	573348	574087	740	545	371	0.9963302752293578	+	CGCUUUGCGAUUGUAGAAACUGAACGCA	10	124	272	42	45	43	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:621538-621958	Cluster_5744	Pocillopora_meandrina_HIv1___Sc0000026	621538	621958	421	283	75	1.0	+	AAGGAGGUUUUUUGAAAAA	51	141	39	60	15	5	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:630397-630858	Cluster_5745	Pocillopora_meandrina_HIv1___Sc0000026	630397	630858	462	1403	238	1.0	+	UUGAAAUGAUGCAGAAACAUGUUAGACU	194	65	973	19	54	239	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:632280-632715	Cluster_5746	Pocillopora_meandrina_HIv1___Sc0000026	632280	632715	436	355	126	1.0	+	UACCUACAAUGAGACUGA	27	165	97	51	14	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:698284-699067	Cluster_5747	Pocillopora_meandrina_HIv1___Sc0000026	698284	699067	784	797	332	0.1656210790464241	-	UUUAGACUUGCAAACUUUGCUAAAAUGA	95	7	733	6	11	20	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:699942-700643	Cluster_5748	Pocillopora_meandrina_HIv1___Sc0000026	699942	700643	702	273	139	0.07326007326007326	-	UGAUGUGAUUUCCUGUUUGACUUGGUU	23	2	254	1	8	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:791196-791826	Cluster_5749	Pocillopora_meandrina_HIv1___Sc0000026	791196	791826	631	1546	397	0.9650711513583441	+	UGUCGAAGAUAAGUAGCGAAGUUCUAUU	180	14	1469	23	5	9	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:792187-792608	Cluster_5750	Pocillopora_meandrina_HIv1___Sc0000026	792187	792608	422	164	100	0.9390243902439024	+	UAUAAUCAAACGUAAAACUGUGACGUGGGC	23	10	137	5	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:949837-950319	Cluster_5751	Pocillopora_meandrina_HIv1___Sc0000026	949837	950319	483	309	161	0.9773462783171522	+	CCUUCGAUAGCUCAGUUGGU	29	131	84	43	10	24	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:977072-977501	Cluster_5752	Pocillopora_meandrina_HIv1___Sc0000026	977072	977501	430	258	18	0.0	-	UGAAUGCUCUGCGACUGAGUGUAGGACGAG	112	2	252	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1030722-1031142	Cluster_5753	Pocillopora_meandrina_HIv1___Sc0000026	1030722	1031142	421	131	53	0.1984732824427481	-	UCGAUUCCUGAUGUUUCCCGAGA	42	36	18	4	6	63	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1128307-1128734	Cluster_5754	Pocillopora_meandrina_HIv1___Sc0000026	1128307	1128734	428	203	97	0.034482758620689655	-	UACGAUCGCUUUGACUUGACUCGCGUCACA	17	5	193	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1131534-1132186	Cluster_5755	Pocillopora_meandrina_HIv1___Sc0000026	1131534	1132186	653	669	236	0.04484304932735426	-	UAAUGACUUCAGAGUAGACAGAGACGGU	73	4	655	4	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1132594-1133482	Cluster_5756	Pocillopora_meandrina_HIv1___Sc0000026	1132594	1133482	889	515	253	0.23689320388349513	.	UCAGACUAGCAACAUGAUCUUCGGUGA	19	10	440	10	2	35	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1133495-1133918	Cluster_5757	Pocillopora_meandrina_HIv1___Sc0000026	1133495	1133918	424	202	85	0.024752475247524754	-	UCAAAAGCUGCCGAUAAAUCUAAA	47	1	129	3	0	5	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1138805-1139368	Cluster_5758	Pocillopora_meandrina_HIv1___Sc0000026	1138805	1139368	564	394	139	0.025380710659898477	-	UCUAUUUUCUUCUCGGUGCCGAUGACGUGU	33	8	378	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1142822-1143245	Cluster_5759	Pocillopora_meandrina_HIv1___Sc0000026	1142822	1143245	424	176	71	0.011363636363636364	-	UGUAUCUUCGUCCGUGUUCCAUUUGACUC	28	0	165	2	4	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1143715-1144144	Cluster_5760	Pocillopora_meandrina_HIv1___Sc0000026	1143715	1144144	430	313	76	0.0	-	UGAAUUCGUAGUGCUCGUCGUAGAUCAUGA	133	0	295	16	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1154719-1154813	Cluster_5761	Pocillopora_meandrina_HIv1___Sc0000026	1154719	1154813	95	23971	150	0.0	-	UAAGAUCAAGUUCAUGGUAUUCU	14088	61	53	21	570	22819	447	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000026:1240547-1240965	Cluster_5762	Pocillopora_meandrina_HIv1___Sc0000026	1240547	1240965	419	254	49	0.20866141732283464	.	CGGCCUGAAAAAAAAAAA	115	194	26	15	6	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1299033-1299450	Cluster_5763	Pocillopora_meandrina_HIv1___Sc0000026	1299033	1299450	418	616	16	0.9983766233766234	+	CGGCCUGAAAAAAAAA	315	616	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1413056-1413485	Cluster_5764	Pocillopora_meandrina_HIv1___Sc0000026	1413056	1413485	430	1550	122	0.0012903225806451613	-	UCUUUCGGUCACGUGGGCUUCAAACGCGU	581	3	1537	1	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1606998-1607802	Cluster_5765	Pocillopora_meandrina_HIv1___Sc0000026	1606998	1607802	805	916	555	0.001091703056768559	-	CUUGACGAUUGUUUUGGGUUUCACU	28	180	454	45	72	76	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1610525-1610928	Cluster_5766	Pocillopora_meandrina_HIv1___Sc0000026	1610525	1610928	404	153	105	0.0	-	GAGGAGCAGAAUCAGACA	10	51	39	26	16	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1614939-1615346	Cluster_5767	Pocillopora_meandrina_HIv1___Sc0000026	1614939	1615346	408	129	89	0.0	-	GGGGUCUGCGAUCUGAGAAA	7	37	45	9	10	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1616657-1617081	Cluster_5768	Pocillopora_meandrina_HIv1___Sc0000026	1616657	1617081	425	244	173	0.0	-	AAUGCCGAUGAAGACUGGAGACGGAGAUU	7	57	102	25	25	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1842927-1843348	Cluster_5769	Pocillopora_meandrina_HIv1___Sc0000026	1842927	1843348	422	132	68	0.9924242424242424	+	CAAAGAACUGAGCACAGA	16	41	49	15	15	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1905946-1906394	Cluster_5770	Pocillopora_meandrina_HIv1___Sc0000026	1905946	1906394	449	502	217	0.20318725099601595	.	UAUGACGUUCCAGAAUCUUUGACAAAA	33	4	469	6	6	1	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1906916-1907345	Cluster_5771	Pocillopora_meandrina_HIv1___Sc0000026	1906916	1907345	430	137	44	0.014598540145985401	-	AAACGAUUGAAUAGCAUAACUGAUGAACUA	19	0	135	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2020697-2021125	Cluster_5772	Pocillopora_meandrina_HIv1___Sc0000026	2020697	2021125	429	146	42	0.9931506849315068	+	GUUUCCGUAGUGUAGUGGUUAUCACGUGC	49	19	111	4	4	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2099923-2100394	Cluster_5773	Pocillopora_meandrina_HIv1___Sc0000026	2099923	2100394	472	4069	387	0.010076185795035636	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	1040	286	3620	29	75	33	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2270068-2270496	Cluster_5774	Pocillopora_meandrina_HIv1___Sc0000026	2270068	2270496	429	112	46	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	34	0	112	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2272756-2273165	Cluster_5775	Pocillopora_meandrina_HIv1___Sc0000026	2272756	2273165	410	79	35	0.25316455696202533	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	13	1	77	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2274567-2274996	Cluster_5776	Pocillopora_meandrina_HIv1___Sc0000026	2274567	2274996	430	197	41	0.9796954314720813	+	UGGAGAUGGAAUCAAGAAAUGCAAAACAGG	78	1	184	0	5	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2275173-2275598	Cluster_5777	Pocillopora_meandrina_HIv1___Sc0000026	2275173	2275598	426	204	37	0.1715686274509804	-	UAGUUUGAAAAGAUAUCGCUCAGUG	88	9	185	5	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2496420-2496840	Cluster_5778	Pocillopora_meandrina_HIv1___Sc0000026	2496420	2496840	421	148	11	0.0	-	AAAGUUCUGGUUUAAAAAAAAA	41	61	1	31	44	11	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2593185-2593614	Cluster_5779	Pocillopora_meandrina_HIv1___Sc0000026	2593185	2593614	430	304	33	1.0	+	AACUACUGCUCGUACUCUAGAUAUGACA	76	10	290	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2699237-2699665	Cluster_5780	Pocillopora_meandrina_HIv1___Sc0000026	2699237	2699665	429	416	54	0.01201923076923077	-	UGACCGGUUUGCCCGACUGAAUAUCUCUC	222	2	409	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2700106-2700534	Cluster_5781	Pocillopora_meandrina_HIv1___Sc0000026	2700106	2700534	429	170	44	0.0	-	UUGGAUAAAUUGGGUGUUAGUGAGAAGCC	43	1	168	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2854799-2855381	Cluster_5782	Pocillopora_meandrina_HIv1___Sc0000026	2854799	2855381	583	1664	267	0.9783653846153846	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	520	4	1638	4	3	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2855709-2856305	Cluster_5783	Pocillopora_meandrina_HIv1___Sc0000026	2855709	2856305	597	5575	505	0.9974887892376681	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	804	17	5512	7	4	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2858479-2858906	Cluster_5784	Pocillopora_meandrina_HIv1___Sc0000026	2858479	2858906	428	98	45	1.0	+	AGUUUCUUACUUCGGACAUCAAAUUUUGU	15	2	95	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2861063-2861801	Cluster_5785	Pocillopora_meandrina_HIv1___Sc0000026	2861063	2861801	739	1695	269	0.9988200589970502	+	UAACGAGAUUAAAACGACAAUGAACAAUAUA	389	7	1678	0	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2861901-2863409	Cluster_5786	Pocillopora_meandrina_HIv1___Sc0000026	2861901	2863409	1509	7998	612	0.9998749687421855	+	UCUGGAAAAUUUUCAGCGUGUGGGCAUCUC	2694	10	7934	7	13	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2864434-2864857	Cluster_5787	Pocillopora_meandrina_HIv1___Sc0000026	2864434	2864857	424	226	112	1.0	+	UUAGAGACACGAGCUGAACUCCAUUGUAGC	19	0	224	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2864896-2865622	Cluster_5788	Pocillopora_meandrina_HIv1___Sc0000026	2864896	2865622	727	417	160	1.0	+	UUUUGUUACAAGAAUCGAUCUGUGGUUCCAC	33	1	412	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2865714-2867126	Cluster_5789	Pocillopora_meandrina_HIv1___Sc0000026	2865714	2867126	1413	5986	700	0.9998329435349148	+	UGAAAUGACUCUCGGUACAGGACCAUGUG	1559	28	5888	17	7	10	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2867361-2867821	Cluster_5790	Pocillopora_meandrina_HIv1___Sc0000026	2867361	2867821	461	1086	135	1.0	+	UUAUAAGCUUGUGAUCGUUUAUCCAACUGGC	375	9	1068	4	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2867919-2868544	Cluster_5791	Pocillopora_meandrina_HIv1___Sc0000026	2867919	2868544	626	2141	180	1.0	+	UGCAACUUGCCGUCCAUUGUAAAGAACGAU	1177	4	2120	0	10	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2874318-2875769	Cluster_5792	Pocillopora_meandrina_HIv1___Sc0000026	2874318	2875769	1452	12254	1332	0.9872694630324792	+	UCCGAUCCCUGAUCUAAUCCCUGACCCGA	1669	143	11989	19	33	48	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2877087-2877596	Cluster_5793	Pocillopora_meandrina_HIv1___Sc0000026	2877087	2877596	510	435	92	0.9954022988505747	+	UUGGUUCCCUCUUCCACUAGAUGGUAAGU	71	16	404	2	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2926850-2927261	Cluster_5794	Pocillopora_meandrina_HIv1___Sc0000026	2926850	2927261	412	74	29	0.972972972972973	+	UUCACCAUACGGACCGACCCUA	15	19	2	29	20	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3143476-3144415	Cluster_5795	Pocillopora_meandrina_HIv1___Sc0000026	3143476	3144415	940	935	423	0.8609625668449198	+	UUCGAUCUUUUCUGUGUAAUGUGUAGCCG	33	8	841	4	9	34	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3240247-3240674	Cluster_5796	Pocillopora_meandrina_HIv1___Sc0000026	3240247	3240674	428	155	19	0.0	-	UGAAACUCUGAUCUGAAAACAUUUGUC	64	1	154	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3383355-3383785	Cluster_5797	Pocillopora_meandrina_HIv1___Sc0000026	3383355	3383785	431	561	77	0.9964349376114082	+	AAUUAAAUGUAUAAACGAAAAUAGUAGAAU	99	8	542	1	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3714299-3714726	Cluster_5798	Pocillopora_meandrina_HIv1___Sc0000026	3714299	3714726	428	98	24	0.0	-	AGUCAUUUCGAAACAUGGACAACUGGGU	31	0	96	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3864683-3865111	Cluster_5799	Pocillopora_meandrina_HIv1___Sc0000026	3864683	3865111	429	188	35	0.0	-	AGGAUGGACUGUGUUCCAGAAGAGACUG	50	3	178	0	7	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3877771-3878189	Cluster_5800	Pocillopora_meandrina_HIv1___Sc0000026	3877771	3878189	419	70	19	0.0	-	AGGAUGGACAGUGUUCCAGAAGAGACUGG	14	1	65	0	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3907219-3907656	Cluster_5801	Pocillopora_meandrina_HIv1___Sc0000026	3907219	3907656	438	472	171	0.9830508474576272	+	CGCGGGAGACCGGGGUUCGAUUCCCCG	50	36	365	6	40	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3912046-3912474	Cluster_5802	Pocillopora_meandrina_HIv1___Sc0000026	3912046	3912474	429	300	91	0.27	.	GACGCGUAUAAUGUAGCUCUGGUUGAGG	52	13	261	9	0	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4115811-4116238	Cluster_5803	Pocillopora_meandrina_HIv1___Sc0000026	4115811	4116238	428	114	44	0.9649122807017544	+	AGGAUGGACAGUGUUUCAGAAGAGACUGG	13	9	86	4	7	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4178493-4178914	Cluster_5804	Pocillopora_meandrina_HIv1___Sc0000026	4178493	4178914	422	79	8	0.8860759493670886	+	UCUGACGAAGGGCUGACACUCG	69	1	5	1	70	0	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4340248-4340652	Cluster_5805	Pocillopora_meandrina_HIv1___Sc0000026	4340248	4340652	405	115	95	0.008695652173913044	-	GCUGGACGGAAUUCAGUG	4	45	44	12	6	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4542219-4542774	Cluster_5806	Pocillopora_meandrina_HIv1___Sc0000026	4542219	4542774	556	5528	392	0.2541606367583213	.	UCCGGUGUAAAAUAAAACAGAAGCAUU	1346	64	4699	361	36	111	257	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4570036-4570464	Cluster_5807	Pocillopora_meandrina_HIv1___Sc0000026	4570036	4570464	429	388	46	0.005154639175257732	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	275	0	384	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4606865-4607294	Cluster_5808	Pocillopora_meandrina_HIv1___Sc0000026	4606865	4607294	430	304	93	0.9901315789473685	+	UGUAAAGACGUUUUGAGGCUUUGGAGACA	61	2	297	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4661408-4661833	Cluster_5809	Pocillopora_meandrina_HIv1___Sc0000026	4661408	4661833	426	131	61	0.03816793893129771	-	UGCUCGAUUAAUUUGGACAAAGUGUCAUCUC	11	1	128	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4918463-4918885	Cluster_5810	Pocillopora_meandrina_HIv1___Sc0000026	4918463	4918885	423	179	29	0.9888268156424581	+	UUCGCGUCUGAAGCUGUUAGAGU	95	16	6	4	14	135	4	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5244402-5244920	Cluster_5811	Pocillopora_meandrina_HIv1___Sc0000026	5244402	5244920	519	3202	291	1.0	+	GUUGUCAGUCAACUCUCAAACAUCU	1100	116	2592	37	321	66	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5310165-5311667	Cluster_5812	Pocillopora_meandrina_HIv1___Sc0000026	5310165	5311667	1503	1780	741	0.04044943820224719	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	56	21	1680	8	13	33	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5321897-5322314	Cluster_5813	Pocillopora_meandrina_HIv1___Sc0000026	5321897	5322314	418	175	29	0.06857142857142857	-	GAUGGAUGGAGACUGCUC	46	164	5	2	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5391496-5391926	Cluster_5814	Pocillopora_meandrina_HIv1___Sc0000026	5391496	5391926	431	46943	448	0.9999786975693926	+	GCACUGGUGGUUCAGUGGUAGAAUUCUC	13929	19	46807	3	6	9	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5482131-5482553	Cluster_5815	Pocillopora_meandrina_HIv1___Sc0000026	5482131	5482553	423	155	39	1.0	+	UAACGUCAACUUCUUGUCUCUAG	47	5	19	11	2	60	58	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5486208-5486634	Cluster_5816	Pocillopora_meandrina_HIv1___Sc0000026	5486208	5486634	427	720	137	1.0	+	GCAAAAUGAUGAAGAACCAUGGGC	142	46	127	38	42	103	364	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:222628-223057	Cluster_5817	Pocillopora_meandrina_HIv1___Sc0000027	222628	223057	430	208	17	1.0	+	UUAUAACCGAGUGUGCCUUAUAACCGAAU	100	0	208	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:433322-433863	Cluster_5818	Pocillopora_meandrina_HIv1___Sc0000027	433322	433863	542	5077	601	0.00019696671262556627	-	GGUGACCCGCUUACUUCUGCG	724	2031	1193	1357	211	180	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:489845-490263	Cluster_5819	Pocillopora_meandrina_HIv1___Sc0000027	489845	490263	419	213	151	0.9953051643192489	+	CAUGACCCUGGACGCGGUGCACCGUU	6	61	62	27	16	21	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:490699-491360	Cluster_5820	Pocillopora_meandrina_HIv1___Sc0000027	490699	491360	662	360	230	1.0	+	GAGGGAACUAUUGUCUGCAAU	27	102	90	63	35	47	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:632959-635072	Cluster_5821	Pocillopora_meandrina_HIv1___Sc0000027	632959	635072	2114	17814	1863	0.017009093971034017	-	UACGAGCGAUAGAUCUUAAGCAUGUGCUGC	2612	41	15952	271	85	136	1329	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:639475-639959	Cluster_5822	Pocillopora_meandrina_HIv1___Sc0000027	639475	639959	485	2626	313	0.0594059405940594	-	UAGGCGUUAAACUUUCAUUGAUAA	907	22	1572	4	4	17	1007	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:661506-662214	Cluster_5823	Pocillopora_meandrina_HIv1___Sc0000027	661506	662214	709	4012	735	0.9506480558325024	+	UUCAUCGGGAUCUCCUAAAAUAAGUGG	862	11	3879	9	17	34	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:662408-662994	Cluster_5824	Pocillopora_meandrina_HIv1___Sc0000027	662408	662994	587	583	243	0.5420240137221269	.	CAGGAAUGUAGUGCUGAACAACCA	33	4	424	26	12	47	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:663443-663885	Cluster_5825	Pocillopora_meandrina_HIv1___Sc0000027	663443	663885	443	258	102	0.8527131782945736	+	UUUGCCAUGUCUGUUGAAGUAUAGAACAAC	18	2	218	0	3	34	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:665651-666080	Cluster_5826	Pocillopora_meandrina_HIv1___Sc0000027	665651	666080	430	97	24	0.979381443298969	+	UGAACAGAGGUAAAUCUUCGUACAUGAAUGA	50	2	94	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:698437-698866	Cluster_5827	Pocillopora_meandrina_HIv1___Sc0000027	698437	698866	430	159	42	0.0440251572327044	-	UGUACUGUGAACAUAGUGUUACCAACCAUU	70	0	156	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:704407-704834	Cluster_5828	Pocillopora_meandrina_HIv1___Sc0000027	704407	704834	428	191	53	0.6701570680628273	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	60	5	179	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:764669-765087	Cluster_5829	Pocillopora_meandrina_HIv1___Sc0000027	764669	765087	419	235	141	1.0	+	AAGAACCCCUGAGCGCGG	21	110	60	18	12	20	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:765961-766467	Cluster_5830	Pocillopora_meandrina_HIv1___Sc0000027	765961	766467	507	720	397	1.0	+	CAUAGCGUGAACUCAAGAGAGCU	54	119	302	36	46	145	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:783466-783891	Cluster_5831	Pocillopora_meandrina_HIv1___Sc0000027	783466	783891	426	94	34	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	20	0	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:802361-802789	Cluster_5832	Pocillopora_meandrina_HIv1___Sc0000027	802361	802789	429	2221	74	1.0	+	UCUUGGACUGCCAGAGAACUUUGAGCAUU	1376	2	2210	3	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:837534-837952	Cluster_5833	Pocillopora_meandrina_HIv1___Sc0000027	837534	837952	419	90	35	0.03333333333333333	-	UUAUCUAUUACUGCACUGCGGC	11	34	4	8	31	13	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:953117-953545	Cluster_5834	Pocillopora_meandrina_HIv1___Sc0000027	953117	953545	429	154	43	0.006493506493506494	-	UGAAACGUGUUGCUGAACGCUUGUUGUAG	32	2	152	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:953648-954075	Cluster_5835	Pocillopora_meandrina_HIv1___Sc0000027	953648	954075	428	74	13	0.013513513513513514	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	33	0	74	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1050272-1050697	Cluster_5836	Pocillopora_meandrina_HIv1___Sc0000027	1050272	1050697	426	168	66	0.0	-	AACUGGUGCACUUGUAGUGGGUGAUC	55	4	151	3	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1068731-1069156	Cluster_5837	Pocillopora_meandrina_HIv1___Sc0000027	1068731	1069156	426	112	39	0.03571428571428571	-	UGCCGAAAGAGGAGAGAUUGCCCUGUC	15	2	105	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1198587-1199103	Cluster_5838	Pocillopora_meandrina_HIv1___Sc0000027	1198587	1199103	517	247	101	0.9635627530364372	+	UAAAGACUCAUCAUGACAAUCGGUCAGA	38	14	221	4	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1397486-1398303	Cluster_5839	Pocillopora_meandrina_HIv1___Sc0000027	1397486	1398303	818	2983	1354	0.0013409319477036541	-	CUUGUCAAUGAUAAAAGUUCUACCCA	60	789	1275	266	216	259	178	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1400737-1401246	Cluster_5840	Pocillopora_meandrina_HIv1___Sc0000027	1400737	1401246	510	616	347	0.0	-	GAUCUGGAGAAACAUGUUAAUGAAU	19	196	214	51	52	56	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1401646-1402550	Cluster_5841	Pocillopora_meandrina_HIv1___Sc0000027	1401646	1402550	905	3397	1154	0.005004415660877244	-	ACAGUGAUUGAACGAGGCA	184	1222	842	414	394	300	225	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1405659-1406272	Cluster_5842	Pocillopora_meandrina_HIv1___Sc0000027	1405659	1406272	614	709	488	0.0014104372355430183	-	AUUUAGGUCUGGGAACAGUGUAUCC	12	156	318	54	66	65	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1406305-1406711	Cluster_5843	Pocillopora_meandrina_HIv1___Sc0000027	1406305	1406711	407	224	184	0.0	-	UGGAGGCAGCUGGACAAUAUGCUCU	5	48	101	15	28	20	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1406775-1407194	Cluster_5844	Pocillopora_meandrina_HIv1___Sc0000027	1406775	1407194	420	152	79	0.0	-	UUAGAAAAAGACGUGUACCA	26	74	32	26	8	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1408831-1409253	Cluster_5845	Pocillopora_meandrina_HIv1___Sc0000027	1408831	1409253	423	150	112	0.0	-	UGUGGACAAAGUGUGAAAUGCA	3	34	62	7	18	15	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1541116-1541543	Cluster_5846	Pocillopora_meandrina_HIv1___Sc0000027	1541116	1541543	428	324	64	0.0	-	CUCGUGGCUGUCAGGUUCGCUGUGCUGU	55	26	174	53	14	48	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1658367-1658797	Cluster_5847	Pocillopora_meandrina_HIv1___Sc0000027	1658367	1658797	431	392	84	0.08163265306122448	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	124	7	368	2	0	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1662174-1662991	Cluster_5848	Pocillopora_meandrina_HIv1___Sc0000027	1662174	1662991	818	673	156	0.03268945022288262	-	UACUAGAAUCUAACGAACAGCUCGAACACU	74	30	619	1	3	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1668827-1669254	Cluster_5849	Pocillopora_meandrina_HIv1___Sc0000027	1668827	1669254	428	273	37	0.02564102564102564	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	123	0	267	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1772386-1772800	Cluster_5850	Pocillopora_meandrina_HIv1___Sc0000027	1772386	1772800	415	77	18	0.025974025974025976	-	GACUUUGGUGGAGAUGGA	18	69	1	0	4	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1871789-1872212	Cluster_5851	Pocillopora_meandrina_HIv1___Sc0000027	1871789	1872212	424	2235	93	0.9991051454138703	+	UAGUUUUGAUUGUUGACAGCGUU	1019	69	11	27	407	1575	146	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1965563-1966261	Cluster_5852	Pocillopora_meandrina_HIv1___Sc0000027	1965563	1966261	699	641	435	0.0062402496099844	-	AGGACUGAUGCGUUUCUCGUGUU	13	131	304	51	54	54	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1970770-1971419	Cluster_5853	Pocillopora_meandrina_HIv1___Sc0000027	1970770	1971419	650	1353	635	0.005912786400591279	-	CAUCGAUGUAGAAAUAAAUGUAACACUUUU	19	328	625	118	104	94	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1974268-1974685	Cluster_5854	Pocillopora_meandrina_HIv1___Sc0000027	1974268	1974685	418	273	181	0.014652014652014652	-	AGAGCAAAAGGGACGAAGA	8	95	69	28	33	27	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1977430-1977834	Cluster_5855	Pocillopora_meandrina_HIv1___Sc0000027	1977430	1977834	405	151	109	0.026490066225165563	-	CUUCACAAGGACUGAUGUGUUCC	7	25	59	18	14	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1981421-1981841	Cluster_5856	Pocillopora_meandrina_HIv1___Sc0000027	1981421	1981841	421	304	221	0.0	-	CAGUUAGGACACGUUGCGCAU	8	58	133	28	33	28	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1981888-1982310	Cluster_5857	Pocillopora_meandrina_HIv1___Sc0000027	1981888	1982310	423	155	95	0.0	-	GACGACUGUGUACUGCUGU	10	48	60	12	14	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2334838-2335266	Cluster_5858	Pocillopora_meandrina_HIv1___Sc0000027	2334838	2335266	429	200	58	1.0	+	UCUGACGAGAAACGAGCUUUCCCAAAAUC	60	5	190	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2343596-2344208	Cluster_5859	Pocillopora_meandrina_HIv1___Sc0000027	2343596	2344208	613	490	151	0.9591836734693877	+	UAAUGCUGCUUAAUUCUUCCUCCAAUAGGA	84	6	465	4	6	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2345299-2345720	Cluster_5860	Pocillopora_meandrina_HIv1___Sc0000027	2345299	2345720	422	129	61	0.8449612403100775	+	UUGAAUGUUUUCUGCACUGUAGAGAAGAC	12	4	112	0	6	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2346262-2346696	Cluster_5861	Pocillopora_meandrina_HIv1___Sc0000027	2346262	2346696	435	230	123	0.7869565217391304	.	UGAACUACACGAGGAACUAGACGAACUUUAC	12	8	198	0	2	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2449992-2450525	Cluster_5862	Pocillopora_meandrina_HIv1___Sc0000027	2449992	2450525	534	1261	274	0.8620142743854085	+	UUAUUUCUACAUAGAGCGAGCUCACAUC	540	65	1117	23	13	40	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2572781-2573209	Cluster_5863	Pocillopora_meandrina_HIv1___Sc0000027	2572781	2573209	429	151	71	0.7218543046357616	.	UCGAUUCCACCGAAAGAAAUAACCUGUGC	28	28	99	14	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2691298-2691725	Cluster_5864	Pocillopora_meandrina_HIv1___Sc0000027	2691298	2691725	428	89	21	0.9775280898876404	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	32	1	88	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2889739-2890161	Cluster_5865	Pocillopora_meandrina_HIv1___Sc0000027	2889739	2890161	423	342	69	0.06725146198830409	-	UUCGCGUCUGAAGCUGUUAGAGU	119	37	16	9	55	218	7	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2974520-2974943	Cluster_5866	Pocillopora_meandrina_HIv1___Sc0000027	2974520	2974943	424	180	20	0.9888888888888889	+	UUUGAACUCCUAAGAUCUGAUUGU	112	2	7	1	1	3	166	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2994566-2994993	Cluster_5867	Pocillopora_meandrina_HIv1___Sc0000027	2994566	2994993	428	186	60	0.2956989247311828	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	37	1	147	2	1	2	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2995733-2996153	Cluster_5868	Pocillopora_meandrina_HIv1___Sc0000027	2995733	2996153	421	235	116	0.08936170212765958	-	UGAAAGAACUUUCAUGAUGCGUUUUACCU	17	1	216	2	2	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2996504-2996928	Cluster_5869	Pocillopora_meandrina_HIv1___Sc0000027	2996504	2996928	425	311	186	0.07395498392282958	-	UCAGACACGUGGAUACUUGCGAUGAAGU	15	5	283	0	3	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2997011-2997436	Cluster_5870	Pocillopora_meandrina_HIv1___Sc0000027	2997011	2997436	426	188	124	0.14361702127659576	-	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	17	1	169	1	6	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3271772-3272346	Cluster_5871	Pocillopora_meandrina_HIv1___Sc0000027	3271772	3272346	575	889	289	0.16647919010123735	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	127	7	839	1	3	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3272708-3273120	Cluster_5872	Pocillopora_meandrina_HIv1___Sc0000027	3272708	3273120	413	218	129	0.17889908256880735	-	UGAACUUAACGACACCUAGAUCUGCACAAGC	17	3	189	1	8	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3273423-3274148	Cluster_5873	Pocillopora_meandrina_HIv1___Sc0000027	3273423	3274148	726	1044	239	0.15996168582375478	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	156	6	987	2	1	13	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3274793-3275472	Cluster_5874	Pocillopora_meandrina_HIv1___Sc0000027	3274793	3275472	680	248	130	0.09274193548387097	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	29	0	233	6	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3398822-3399226	Cluster_5875	Pocillopora_meandrina_HIv1___Sc0000027	3398822	3399226	405	112	51	1.0	+	UGAUCUGAUUGAGUUAACUAAACUGGAGUG	23	2	102	0	6	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3402621-3403050	Cluster_5876	Pocillopora_meandrina_HIv1___Sc0000027	3402621	3403050	430	363	110	0.9421487603305785	+	UAGUAUAACUUUGAUCUGAUGAAAAUC	73	0	354	2	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3407295-3407721	Cluster_5877	Pocillopora_meandrina_HIv1___Sc0000027	3407295	3407721	427	122	50	0.819672131147541	+	UGCUUCAUUUCCUUGACUGUAGUCUGC	22	5	108	2	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3414587-3415537	Cluster_5878	Pocillopora_meandrina_HIv1___Sc0000027	3414587	3415537	951	3072	584	0.9251302083333334	+	UGACUCCUUUCAAUCUGGCACAACCC	404	51	2805	29	32	84	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3747916-3748344	Cluster_5879	Pocillopora_meandrina_HIv1___Sc0000027	3747916	3748344	429	266	66	0.0	-	AAGGAAACCGAUCAGUUUAGACUCACAUU	109	3	252	0	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3928055-3928478	Cluster_5880	Pocillopora_meandrina_HIv1___Sc0000027	3928055	3928478	424	214	123	0.08411214953271028	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	44	1	200	1	0	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3929345-3929772	Cluster_5881	Pocillopora_meandrina_HIv1___Sc0000027	3929345	3929772	428	184	72	0.9510869565217391	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	1	175	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3931252-3932300	Cluster_5882	Pocillopora_meandrina_HIv1___Sc0000027	3931252	3932300	1049	736	343	0.8057065217391305	+	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	26	9	694	3	4	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3932560-3932990	Cluster_5883	Pocillopora_meandrina_HIv1___Sc0000027	3932560	3932990	431	647	216	0.9072642967542504	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	99	4	548	3	2	9	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3959280-3959698	Cluster_5884	Pocillopora_meandrina_HIv1___Sc0000027	3959280	3959698	419	150	35	0.9666666666666667	+	UUGGGUACUGGUGCACUGG	72	77	42	2	2	23	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3973506-3973954	Cluster_5885	Pocillopora_meandrina_HIv1___Sc0000027	3973506	3973954	449	2657	162	0.8411742566804666	+	UCCAUCUUCACCUAUUCUUGCACUGCU	490	7	2582	3	17	15	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4051379-4051821	Cluster_5886	Pocillopora_meandrina_HIv1___Sc0000027	4051379	4051821	443	469	143	0.15991471215351813	-	UAGGAACCAAAUACUUUCACAGUAAAGC	81	7	420	2	2	25	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4138015-4138983	Cluster_5887	Pocillopora_meandrina_HIv1___Sc0000027	4138015	4138983	969	1402	395	0.13338088445078458	-	UCACAGGUAUAUAUUCUAUCGCUCUUCAAC	92	12	1269	10	8	43	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4142855-4143281	Cluster_5888	Pocillopora_meandrina_HIv1___Sc0000027	4142855	4143281	427	112	28	1.0	+	UAAAAGCUCCUGUGCAACCUGCACUGA	47	0	111	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4191636-4192761	Cluster_5889	Pocillopora_meandrina_HIv1___Sc0000027	4191636	4192761	1126	2176	563	0.06020220588235294	-	UCGUAUGAAAUGAGCUUCUGAACUAGGA	229	18	2054	6	10	29	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4311000-4311455	Cluster_5890	Pocillopora_meandrina_HIv1___Sc0000027	4311000	4311455	456	194	64	0.0	-	AAGGAAACGGAUCGGUUUAGACUCACAUU	34	5	154	9	2	18	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4356950-4357770	Cluster_5891	Pocillopora_meandrina_HIv1___Sc0000027	4356950	4357770	821	1064	146	0.18796992481203006	-	UAAUCGUUGGCUUUUUCUCGAGGCGUG	304	29	1004	8	6	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4585570-4587589	Cluster_5892	Pocillopora_meandrina_HIv1___Sc0000027	4585570	4587589	2020	6347	1662	0.21695289112966756	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	439	201	5680	24	43	180	219	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4588480-4588908	Cluster_5893	Pocillopora_meandrina_HIv1___Sc0000027	4588480	4588908	429	223	123	0.23318385650224216	.	UCCGCUACGUUUUGCUCUCCUGGGACGU	15	3	199	4	3	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4589617-4590384	Cluster_5894	Pocillopora_meandrina_HIv1___Sc0000027	4589617	4590384	768	957	341	0.06478578892371996	-	UGUGUGUCUGAAUGGUCCUUGUGGAACA	79	4	922	6	3	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4692660-4693174	Cluster_5895	Pocillopora_meandrina_HIv1___Sc0000027	4692660	4693174	515	318	233	1.0	+	AUCGUGCUGUCAUGUGGAC	8	81	132	28	20	29	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4746753-4747703	Cluster_5896	Pocillopora_meandrina_HIv1___Sc0000027	4746753	4747703	951	2493	462	0.9991977537103891	+	UCGUUUGUUCCGAGGAUAAGAUGUACGGG	452	44	2422	7	2	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4918196-4918669	Cluster_5897	Pocillopora_meandrina_HIv1___Sc0000027	4918196	4918669	474	168	59	0.47619047619047616	.	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	28	13	143	7	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4943975-4944393	Cluster_5898	Pocillopora_meandrina_HIv1___Sc0000027	4943975	4944393	419	976	57	0.9989754098360656	+	UGCCCGGGUCCUCCACCA	535	955	21	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:5109811-5110214	Cluster_5899	Pocillopora_meandrina_HIv1___Sc0000027	5109811	5110214	404	138	90	0.572463768115942	.	UGACCAAAUCGAAAUAUCUAUAGUUCCUGU	9	1	127	1	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:5348420-5348854	Cluster_5900	Pocillopora_meandrina_HIv1___Sc0000027	5348420	5348854	435	364	63	0.0027472527472527475	-	UGUGUCUAAUGUUGUCGAACGCCCCGCA	113	2	353	2	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:5491266-5492079	Cluster_5901	Pocillopora_meandrina_HIv1___Sc0000027	5491266	5492079	814	426	225	0.15258215962441316	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	20	7	394	3	1	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:96301-96724	Cluster_5902	Pocillopora_meandrina_HIv1___Sc0000028	96301	96724	424	192	63	0.14583333333333334	-	AAUCUCUUUAAGCAUGGACCUGG	42	1	56	4	2	76	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:213783-214227	Cluster_5903	Pocillopora_meandrina_HIv1___Sc0000028	213783	214227	445	329	254	1.0	+	GACAUCAAAGAGAAGCUCUGUUA	5	88	130	27	25	28	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:215954-216389	Cluster_5904	Pocillopora_meandrina_HIv1___Sc0000028	215954	216389	436	417	272	1.0	+	GAACUGUGAGUAUACUGAAGGU	8	93	160	45	48	39	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:217988-218637	Cluster_5905	Pocillopora_meandrina_HIv1___Sc0000028	217988	218637	650	740	480	0.9986486486486487	+	AGAAGGAAAUCACUGCUCUGGCU	17	191	279	65	89	74	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:407248-407669	Cluster_5906	Pocillopora_meandrina_HIv1___Sc0000028	407248	407669	422	104	33	0.0	-	UUUUUCACGCAUGUUGUUAUGG	22	13	1	6	55	26	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:512013-512673	Cluster_5907	Pocillopora_meandrina_HIv1___Sc0000028	512013	512673	661	680	413	1.0	+	GAAGAACGUGUGUAGUAAAACCUA	23	192	242	54	64	57	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:535351-535780	Cluster_5908	Pocillopora_meandrina_HIv1___Sc0000028	535351	535780	430	107	23	0.9532710280373832	+	UUCAGUCCCUCAAGCAAGUUGUCAAGCGGU	44	2	105	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:546898-548917	Cluster_5909	Pocillopora_meandrina_HIv1___Sc0000028	546898	548917	2020	2410	909	0.6850622406639004	.	UGAGGAAUAUGAUCUACACCAUUGCUGC	64	90	1965	39	82	78	156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:598975-599397	Cluster_5910	Pocillopora_meandrina_HIv1___Sc0000028	598975	599397	423	104	40	0.16346153846153846	-	UAUGAUAUCACUGUGGAGCGAGG	37	10	21	7	3	53	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:600728-601129	Cluster_5911	Pocillopora_meandrina_HIv1___Sc0000028	600728	601129	402	147	88	0.4013605442176871	.	UGGACUCGCAGUCAGACGGU	9	44	59	22	7	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:692877-693300	Cluster_5912	Pocillopora_meandrina_HIv1___Sc0000028	692877	693300	424	89	36	0.898876404494382	+	UAAGAUCGAUAAAAAAAAAAAAAAAAA	10	4	65	4	3	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:716352-716780	Cluster_5913	Pocillopora_meandrina_HIv1___Sc0000028	716352	716780	429	77	16	1.0	+	UAAGACAUUUCGCAGAUUUUGACACUCGUU	31	0	77	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:795185-795604	Cluster_5914	Pocillopora_meandrina_HIv1___Sc0000028	795185	795604	420	281	185	1.0	+	UUUGCAGAUGUGGAAAAUGACC	7	93	87	33	33	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:797934-798365	Cluster_5915	Pocillopora_meandrina_HIv1___Sc0000028	797934	798365	432	299	213	1.0	+	GCAGUGAACCUGAUCACGAAAUUUGUUUUCA	8	65	141	27	17	34	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:820274-820700	Cluster_5916	Pocillopora_meandrina_HIv1___Sc0000028	820274	820700	427	226	18	0.0	-	UGGAUUCUUGAAAAAAAAAAAAAAAAA	49	6	165	4	7	16	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:866909-867338	Cluster_5917	Pocillopora_meandrina_HIv1___Sc0000028	866909	867338	430	532	107	0.9736842105263158	+	UGUUUAUCUUCUGUAUGAUUUGGCUCGGU	141	5	503	15	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:867670-868098	Cluster_5918	Pocillopora_meandrina_HIv1___Sc0000028	867670	868098	429	147	51	0.9387755102040817	+	UGAACGCAGAACAGUAGGCCCGUUGGUGA	27	5	130	1	4	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:893321-893750	Cluster_5919	Pocillopora_meandrina_HIv1___Sc0000028	893321	893750	430	248	126	0.008064516129032258	-	CAACAAUGGACAUAGAAGAGUACAAUGCAU	16	12	221	1	2	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:925585-926031	Cluster_5920	Pocillopora_meandrina_HIv1___Sc0000028	925585	926031	447	223	90	0.2600896860986547	.	GAAGAGCUGAAAAAACAGAAACAGAAGACA	32	8	209	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:928630-929114	Cluster_5921	Pocillopora_meandrina_HIv1___Sc0000028	928630	929114	485	429	95	0.2727272727272727	.	GCUGAAAACAACAAUGGACAUAGAAGAGC	93	12	382	2	3	5	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:929523-930086	Cluster_5922	Pocillopora_meandrina_HIv1___Sc0000028	929523	930086	564	695	262	0.007194244604316547	-	AACAGUGAAGUGUGAAUCUCUAAUGAUCUU	79	27	583	34	21	10	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:935841-936270	Cluster_5923	Pocillopora_meandrina_HIv1___Sc0000028	935841	936270	430	272	74	0.003676470588235294	-	UCUCAAAGCCAUAUCUGCUGGUCUUCCAGU	56	6	253	2	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:975759-976189	Cluster_5924	Pocillopora_meandrina_HIv1___Sc0000028	975759	976189	431	116	31	0.008620689655172414	-	UGUGACUGAAAAGAUCCUGAAGGAACUGAAC	68	2	107	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:980376-980928	Cluster_5925	Pocillopora_meandrina_HIv1___Sc0000028	980376	980928	553	605	269	0.11735537190082644	-	UAAUGAAGUCGUAAUUUGUCCAUCC	77	6	569	1	9	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:981506-982018	Cluster_5926	Pocillopora_meandrina_HIv1___Sc0000028	981506	982018	513	167	90	0.023952095808383235	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	20	1	164	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:982237-982973	Cluster_5927	Pocillopora_meandrina_HIv1___Sc0000028	982237	982973	737	396	155	0.06313131313131314	-	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	25	2	371	0	2	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1030156-1030585	Cluster_5928	Pocillopora_meandrina_HIv1___Sc0000028	1030156	1030585	430	411	138	0.7445255474452555	.	UUUUGUGUUAUCUUGUCUUGGAGA	59	12	260	20	6	41	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1031663-1032256	Cluster_5929	Pocillopora_meandrina_HIv1___Sc0000028	1031663	1032256	594	1643	390	0.9257455873402313	+	UAUGAAAGAUCUUGAUGUGGUGCGUCA	159	19	1582	7	7	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1032408-1032895	Cluster_5930	Pocillopora_meandrina_HIv1___Sc0000028	1032408	1032895	488	3191	276	0.9677217173299906	+	UAAGAUCUCUUCGGUCAGAUCGUCACGG	1159	11	3152	2	6	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1044986-1045476	Cluster_5931	Pocillopora_meandrina_HIv1___Sc0000028	1044986	1045476	491	1332	342	0.23873873873873874	.	GAAGAGCUGAAAAAAUGGAAACAGAAGAC	86	31	1235	12	14	18	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1045550-1046077	Cluster_5932	Pocillopora_meandrina_HIv1___Sc0000028	1045550	1046077	528	1424	381	0.12219101123595505	-	GCUGAAAACAACGAUGGACACAGAAGAGU	263	17	1347	7	10	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1049910-1050671	Cluster_5933	Pocillopora_meandrina_HIv1___Sc0000028	1049910	1050671	762	1845	663	0.011382113821138212	-	CAACUAACCAUCCGUCGAUAUUGCAGUGA	77	63	1562	24	29	34	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1083748-1084176	Cluster_5934	Pocillopora_meandrina_HIv1___Sc0000028	1083748	1084176	429	178	20	0.02247191011235955	-	UUGACUGACAGAAGAUCUGGAAACUGAAG	60	1	163	5	8	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1084464-1084890	Cluster_5935	Pocillopora_meandrina_HIv1___Sc0000028	1084464	1084890	427	271	110	0.2177121771217712	.	ACAAAUCCCAAAAGACUGAGCCCUCAACUC	42	3	250	3	4	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1084951-1085841	Cluster_5936	Pocillopora_meandrina_HIv1___Sc0000028	1084951	1085841	891	553	272	0.2513562386980108	.	UAACGUAACAUUGAAUCAGAACAU	35	5	464	2	4	7	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1092280-1093012	Cluster_5937	Pocillopora_meandrina_HIv1___Sc0000028	1092280	1093012	733	517	235	0.009671179883945842	-	AAUGAAUCAAAGUUGGCUGUAGAC	32	5	429	1	2	41	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1114711-1115140	Cluster_5938	Pocillopora_meandrina_HIv1___Sc0000028	1114711	1115140	430	424	112	0.5047169811320755	.	UCUGUCUCAACAAUCUUUGUCUUCUGUU	56	1	411	2	4	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1115370-1115798	Cluster_5939	Pocillopora_meandrina_HIv1___Sc0000028	1115370	1115798	429	229	113	0.06986899563318777	-	GAAAAGAUCUUGAAGGAACUGAACCUGGCA	16	7	212	1	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1116460-1117552	Cluster_5940	Pocillopora_meandrina_HIv1___Sc0000028	1116460	1117552	1093	2698	862	0.09822090437361009	-	AUGGAUCCAAUUUGUUCACGUCUACUGCG	95	54	2357	36	53	53	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1141498-1141925	Cluster_5941	Pocillopora_meandrina_HIv1___Sc0000028	1141498	1141925	428	1005	61	0.9960199004975124	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	495	2	998	1	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1151157-1151877	Cluster_5942	Pocillopora_meandrina_HIv1___Sc0000028	1151157	1151877	721	2768	576	0.16365606936416185	-	UUAAACCGACUCACAGUCCGAUUCGAAU	302	55	2318	13	40	223	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1158472-1158902	Cluster_5943	Pocillopora_meandrina_HIv1___Sc0000028	1158472	1158902	431	333	98	0.003003003003003003	-	GCUGAAAACAACAAUGGACUUAGAAGAGU	70	0	331	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1165516-1165933	Cluster_5944	Pocillopora_meandrina_HIv1___Sc0000028	1165516	1165933	418	104	53	0.5480769230769231	.	AUGUCGGCCAUCUUUGUUAA	13	61	12	21	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1204201-1204631	Cluster_5945	Pocillopora_meandrina_HIv1___Sc0000028	1204201	1204631	431	115	30	0.0	-	UGGAUUAUCGACGUUUAACAGAGAACUUGCC	47	3	106	3	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1214120-1214541	Cluster_5946	Pocillopora_meandrina_HIv1___Sc0000028	1214120	1214541	422	84	36	0.05952380952380952	-	UGCAAUUGCGUGAUUUAAGUAAAAUGUUC	16	0	76	0	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1221414-1222060	Cluster_5947	Pocillopora_meandrina_HIv1___Sc0000028	1221414	1222060	647	402	191	0.009950248756218905	-	AAUGAAUCAAAGUUGGCUGUAGAC	26	7	333	1	3	22	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1261645-1262093	Cluster_5948	Pocillopora_meandrina_HIv1___Sc0000028	1261645	1262093	449	645	162	0.14573643410852713	-	GAAGAGCUGAAAAAAUGGAAACAGAAGACA	93	1	635	0	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1264644-1265502	Cluster_5949	Pocillopora_meandrina_HIv1___Sc0000028	1264644	1265502	859	1709	419	0.021650087770626096	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	83	41	1512	7	68	35	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1269510-1270949	Cluster_5950	Pocillopora_meandrina_HIv1___Sc0000028	1269510	1270949	1440	11015	2108	0.10422151611438947	-	AUCAGUCAGAUUUGGUUGCUCUGCCAUCCC	713	205	10045	78	92	248	347	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1373147-1373575	Cluster_5951	Pocillopora_meandrina_HIv1___Sc0000028	1373147	1373575	429	106	37	1.0	+	UCUCAAAGCCAUAUCUGCUGGUCUUCCAGU	24	0	102	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1376469-1376886	Cluster_5952	Pocillopora_meandrina_HIv1___Sc0000028	1376469	1376886	418	132	86	0.9924242424242424	+	AACAGUGAAGUGCGAAUCUCUAAUGAUCUU	12	3	123	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1395524-1396507	Cluster_5953	Pocillopora_meandrina_HIv1___Sc0000028	1395524	1396507	984	1331	452	0.9278737791134485	+	AUGGAUCCAAUUUGUACACGUCUACUGUG	113	35	1220	12	21	22	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1397764-1398189	Cluster_5954	Pocillopora_meandrina_HIv1___Sc0000028	1397764	1398189	426	178	84	0.9943820224719101	+	GCUGAAAACAACAAUGGAUGAGGGAGAGU	16	5	159	2	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1558478-1558895	Cluster_5955	Pocillopora_meandrina_HIv1___Sc0000028	1558478	1558895	418	777	21	0.9794079794079794	+	GAAGUUCUGGUUUAAAAA	733	765	5	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1838433-1838839	Cluster_5956	Pocillopora_meandrina_HIv1___Sc0000028	1838433	1838839	407	133	91	0.0	-	GUGGCUCGUUGAAAGAAU	4	47	50	8	11	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1959386-1959901	Cluster_5957	Pocillopora_meandrina_HIv1___Sc0000028	1959386	1959901	516	417	158	0.8585131894484412	+	UGAGAUUGUGUAGGUAUGUCUUUUGGACAGG	33	2	361	0	1	45	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2035084-2035513	Cluster_5958	Pocillopora_meandrina_HIv1___Sc0000028	2035084	2035513	430	879	62	1.0	+	CUUGCAAGGAUCAACCGAUGGAAAUUAUGU	380	3	864	2	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2235437-2235851	Cluster_5959	Pocillopora_meandrina_HIv1___Sc0000028	2235437	2235851	415	68	18	0.0	-	CUCGUUGUGUGUGUGUAU	22	68	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2252016-2252422	Cluster_5960	Pocillopora_meandrina_HIv1___Sc0000028	2252016	2252422	407	92	39	0.08695652173913043	-	GAACAGAAGACAAAGAUUGUUGAGACAGA	12	4	75	1	7	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2254255-2254724	Cluster_5961	Pocillopora_meandrina_HIv1___Sc0000028	2254255	2254724	470	555	191	0.012612612612612612	-	GCUGAAAACAACAAUAGACGUAGAAGAGU	65	9	520	4	1	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2269759-2270188	Cluster_5962	Pocillopora_meandrina_HIv1___Sc0000028	2269759	2270188	430	286	54	0.9825174825174825	+	UGAUCAAGUUUCCUAUCGCCUGUAAACA	75	2	281	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2272485-2273583	Cluster_5963	Pocillopora_meandrina_HIv1___Sc0000028	2272485	2273583	1099	1257	482	0.22991249005568815	.	UCCGUGACACAACGACUUUGCCUUGCUU	109	16	1096	16	3	23	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2273753-2274201	Cluster_5964	Pocillopora_meandrina_HIv1___Sc0000028	2273753	2274201	449	451	210	0.1973392461197339	-	UAUGACGUUCCAGAAUCUUUGACAAAA	35	3	425	3	8	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2274765-2275194	Cluster_5965	Pocillopora_meandrina_HIv1___Sc0000028	2274765	2275194	430	155	53	0.012903225806451613	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	33	0	153	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2281627-2282045	Cluster_5966	Pocillopora_meandrina_HIv1___Sc0000028	2281627	2282045	419	156	73	0.0	-	UGAAGAUCUGAACGUCUUGGCAUUGUC	29	1	145	0	5	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2285050-2285477	Cluster_5967	Pocillopora_meandrina_HIv1___Sc0000028	2285050	2285477	428	108	15	0.9814814814814815	+	AACUACUGCUCGUGCUCUAGAUAUGACA	53	0	107	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2318944-2319363	Cluster_5968	Pocillopora_meandrina_HIv1___Sc0000028	2318944	2319363	420	202	28	0.0	-	UGGCCUGAAAAAAAAAAAAA	41	137	0	39	26	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2502458-2502952	Cluster_5969	Pocillopora_meandrina_HIv1___Sc0000028	2502458	2502952	495	429	251	0.8158508158508159	+	GUGAUACCUAUGAACCUGGAGGCU	10	9	349	5	7	22	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2503021-2503697	Cluster_5970	Pocillopora_meandrina_HIv1___Sc0000028	2503021	2503697	677	8097	532	0.9959244164505372	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2226	5	7960	3	44	45	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2506422-2506837	Cluster_5971	Pocillopora_meandrina_HIv1___Sc0000028	2506422	2506837	416	116	43	0.6551724137931034	.	UGAUUGAUUAGGACUAUUUUAUAUGAAU	22	4	100	3	1	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2516269-2516951	Cluster_5972	Pocillopora_meandrina_HIv1___Sc0000028	2516269	2516951	683	1543	334	0.7537265068049255	.	UGUUUAUCUUCUGUAUGAUUUGGCUCGGU	149	8	1489	12	12	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2655966-2656393	Cluster_5973	Pocillopora_meandrina_HIv1___Sc0000028	2655966	2656393	428	210	40	0.009523809523809525	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	91	0	203	2	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3016606-3017082	Cluster_5974	Pocillopora_meandrina_HIv1___Sc0000028	3016606	3017082	477	3428199	1466	1.1667934096007845e-06	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	1113071	4470	3419212	145	326	364	3682	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3737511-3738213	Cluster_5975	Pocillopora_meandrina_HIv1___Sc0000028	3737511	3738213	703	2261	515	0.3772666961521451	.	ACACAGUGCAACUCUCGAAUCUUAAAAAU	229	10	2082	13	19	56	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4044555-4044965	Cluster_5976	Pocillopora_meandrina_HIv1___Sc0000028	4044555	4044965	411	176	133	0.9943181818181818	+	CAAGGAAUCUGAUGCUGCUAAGGCU	6	33	83	9	18	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4165140-4165567	Cluster_5977	Pocillopora_meandrina_HIv1___Sc0000028	4165140	4165567	428	139	55	0.02158273381294964	-	UAACGAACAGCUCGAACACUCGAUACCAGC	22	1	134	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4188650-4189075	Cluster_5978	Pocillopora_meandrina_HIv1___Sc0000028	4188650	4189075	426	178	108	0.8370786516853933	+	UUAACACUAUAAACAUUCUGAGGGCGAU	14	2	157	6	7	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4189085-4189513	Cluster_5979	Pocillopora_meandrina_HIv1___Sc0000028	4189085	4189513	429	205	102	0.8731707317073171	+	UAAUGAACGUAUAGCCAUCCAGUUGAACU	14	4	195	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4395479-4395908	Cluster_5980	Pocillopora_meandrina_HIv1___Sc0000028	4395479	4395908	430	321	74	0.13707165109034267	-	AUUGAUUCUAUUUUGUACGGCCUAGU	121	7	299	2	8	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4997301-4997774	Cluster_5981	Pocillopora_meandrina_HIv1___Sc0000028	4997301	4997774	474	989	176	1.0	+	GCAGCUGAUGAAUUAAAAUU	148	576	103	176	82	31	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:241050-241477	Cluster_5982	Pocillopora_meandrina_HIv1___Sc0000029	241050	241477	428	365	130	0.9561643835616438	+	UCUGUCUCCUCUGUAAUAAUGACACUGA	68	2	353	4	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:271604-272654	Cluster_5983	Pocillopora_meandrina_HIv1___Sc0000029	271604	272654	1051	733	369	0.7844474761255116	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	22	3	686	4	3	15	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:272914-273344	Cluster_5984	Pocillopora_meandrina_HIv1___Sc0000029	272914	273344	431	604	210	0.8940397350993378	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	87	5	516	4	6	11	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:354102-354884	Cluster_5985	Pocillopora_meandrina_HIv1___Sc0000029	354102	354884	783	1718	318	0.8329452852153667	+	UUCAUGCUCUCGUUGUUCAACUGAACGAAG	291	223	1394	10	3	69	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:478823-479308	Cluster_5986	Pocillopora_meandrina_HIv1___Sc0000029	478823	479308	486	1750	224	0.9982857142857143	+	UGGACAAAUUCAUAGGUCUGAUGCAAACAUG	383	29	1686	2	10	15	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:479352-479777	Cluster_5987	Pocillopora_meandrina_HIv1___Sc0000029	479352	479777	426	158	55	0.9556962025316456	+	UAAGACCCAUCCAUCACUAUCAACUCG	23	1	155	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:480405-480833	Cluster_5988	Pocillopora_meandrina_HIv1___Sc0000029	480405	480833	429	184	38	0.9891304347826086	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	87	0	184	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:486033-486480	Cluster_5989	Pocillopora_meandrina_HIv1___Sc0000029	486033	486480	448	783	120	0.7535121328224776	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	160	1	766	2	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:488897-489351	Cluster_5990	Pocillopora_meandrina_HIv1___Sc0000029	488897	489351	455	1541	285	0.8221933809214795	+	UUUCCAACGUAUCGAAGAAAAUUUCACUGA	172	11	1453	1	9	28	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:594923-595346	Cluster_5991	Pocillopora_meandrina_HIv1___Sc0000029	594923	595346	424	83	32	0.060240963855421686	-	CGGCCGGAAAAAAAAAAAAAAAAAAAAAAAA	14	4	74	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:958370-958779	Cluster_5992	Pocillopora_meandrina_HIv1___Sc0000029	958370	958779	410	78	28	0.02564102564102564	-	UGAAAAACUGUGACCGAGGC	20	48	2	20	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1029893-1030594	Cluster_5993	Pocillopora_meandrina_HIv1___Sc0000029	1029893	1030594	702	275	131	0.92	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	27	1	260	2	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1031824-1032252	Cluster_5994	Pocillopora_meandrina_HIv1___Sc0000029	1031824	1032252	429	360	190	0.8055555555555556	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	28	3	327	2	1	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1036429-1036848	Cluster_5995	Pocillopora_meandrina_HIv1___Sc0000029	1036429	1036848	420	145	81	0.9379310344827586	+	UUUGAUCGGUUUUGGCGUGU	20	94	3	38	7	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1128233-1128662	Cluster_5996	Pocillopora_meandrina_HIv1___Sc0000029	1128233	1128662	430	147	71	0.9591836734693877	+	UGUUUACUUUCUUUACAACUUCGGAUACGUG	28	2	143	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1356522-1356951	Cluster_5997	Pocillopora_meandrina_HIv1___Sc0000029	1356522	1356951	430	12023	31	8.31739166597355e-05	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAA	5606	475	11446	48	36	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1617394-1617993	Cluster_5998	Pocillopora_meandrina_HIv1___Sc0000029	1617394	1617993	600	1489	281	0.19408999328408327	-	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	454	9	1408	5	9	18	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1618346-1618898	Cluster_5999	Pocillopora_meandrina_HIv1___Sc0000029	1618346	1618898	553	228	69	0.08333333333333333	-	UAUACUCCAAAGGUUCUGAAAACGAAUG	36	3	198	2	3	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1638242-1638651	Cluster_6000	Pocillopora_meandrina_HIv1___Sc0000029	1638242	1638651	410	157	63	0.732484076433121	.	UUGUUAACUUUGUCUACA	19	39	84	1	0	5	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1726811-1727238	Cluster_6001	Pocillopora_meandrina_HIv1___Sc0000029	1726811	1727238	428	220	88	0.9409090909090909	+	UUAAAUGGCUUGUAAUGACUAAUAAACA	38	0	218	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1727380-1728146	Cluster_6002	Pocillopora_meandrina_HIv1___Sc0000029	1727380	1728146	767	1747	503	0.8820835718374356	+	UGGAUCAAUCUGUUUUUUAUGACAAUA	102	9	1656	3	20	27	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1729528-1730826	Cluster_6003	Pocillopora_meandrina_HIv1___Sc0000029	1729528	1730826	1299	9785	1822	0.5689320388349515	.	ACAUGACAAAACUACGAGCUUAGAAGA	748	50	7977	63	722	312	661	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1983857-1984287	Cluster_6004	Pocillopora_meandrina_HIv1___Sc0000029	1983857	1984287	431	114	24	0.06140350877192982	-	UAAUUCAAACUAUUUGGACACUGGCUUCAAU	64	1	107	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2110212-2110623	Cluster_6005	Pocillopora_meandrina_HIv1___Sc0000029	2110212	2110623	412	137	76	0.0	-	UCCCACAUGGUCUAGCGGUUAGGAUUCCU	15	22	77	14	10	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2127060-2127474	Cluster_6006	Pocillopora_meandrina_HIv1___Sc0000029	2127060	2127474	415	167	120	0.0	-	UAAAUGUACUGUGGGUUGAUACACUUGCCGC	5	23	100	17	6	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2144180-2144602	Cluster_6007	Pocillopora_meandrina_HIv1___Sc0000029	2144180	2144602	423	1731	32	0.9994222992489891	+	CGGCCUGAAGAAAAAAAA	337	881	1	310	296	240	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2159095-2159904	Cluster_6008	Pocillopora_meandrina_HIv1___Sc0000029	2159095	2159904	810	422	145	0.3459715639810427	.	UUCGCGUCUGAAGCUGUUAGAGU	117	59	21	43	34	238	27	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2406014-2406432	Cluster_6009	Pocillopora_meandrina_HIv1___Sc0000029	2406014	2406432	419	96	37	0.010416666666666666	-	UAUUGCUGAACAGACGCACA	33	76	3	8	7	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2495203-2495618	Cluster_6010	Pocillopora_meandrina_HIv1___Sc0000029	2495203	2495618	416	78	21	0.0	-	UGUACCGUGAAACUGGACACUGA	39	0	36	0	0	41	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2569415-2569825	Cluster_6011	Pocillopora_meandrina_HIv1___Sc0000029	2569415	2569825	411	178	137	0.0	-	CCAAUCUAGAAGUGAUGAAUUCCUGCC	6	37	109	8	4	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2576425-2576847	Cluster_6012	Pocillopora_meandrina_HIv1___Sc0000029	2576425	2576847	423	245	49	0.0326530612244898	-	UGGUUUUGUUAGACGAAUGAUG	55	34	2	10	126	68	5	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2755286-2755714	Cluster_6013	Pocillopora_meandrina_HIv1___Sc0000029	2755286	2755714	429	1022	98	1.0	+	AAGUUGAACAGUACAUACUUGGAGGGCA	335	5	967	1	24	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3026372-3026786	Cluster_6014	Pocillopora_meandrina_HIv1___Sc0000029	3026372	3026786	415	214	7	0.985981308411215	+	CUUUCCGAGGUCGCA	156	211	1	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3051035-3051553	Cluster_6015	Pocillopora_meandrina_HIv1___Sc0000029	3051035	3051553	519	188	78	0.648936170212766	.	UCGGUUAUAAGACGCACCCUGAAUUUUU	55	3	167	1	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3159055-3159478	Cluster_6016	Pocillopora_meandrina_HIv1___Sc0000029	3159055	3159478	424	160	43	0.00625	-	UUAACUGGUAGUCAUGACGUCUCC	59	0	98	0	1	1	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3198881-3199283	Cluster_6017	Pocillopora_meandrina_HIv1___Sc0000029	3198881	3199283	403	89	68	0.6292134831460674	.	UGUCUCGAUGAACGCACAGCUGA	5	17	23	10	17	15	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3218961-3219391	Cluster_6018	Pocillopora_meandrina_HIv1___Sc0000029	3218961	3219391	431	2482	96	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	1111	1	2479	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3310561-3310967	Cluster_6019	Pocillopora_meandrina_HIv1___Sc0000029	3310561	3310967	407	152	129	1.0	+	AUAAAGGAUCACGAGAUAGAGAGCU	4	28	69	15	13	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3399939-3400368	Cluster_6020	Pocillopora_meandrina_HIv1___Sc0000029	3399939	3400368	430	451	17	0.0	-	ACAUUACCGAAUGACUGUUCUAAAGAAUU	309	0	441	1	2	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3440457-3440885	Cluster_6021	Pocillopora_meandrina_HIv1___Sc0000029	3440457	3440885	429	126	34	1.0	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	25	0	125	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3518051-3518964	Cluster_6022	Pocillopora_meandrina_HIv1___Sc0000029	3518051	3518964	914	2168	607	0.238929889298893	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	144	23	1797	10	20	220	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4083263-4083679	Cluster_6023	Pocillopora_meandrina_HIv1___Sc0000029	4083263	4083679	417	145	104	0.0	-	UCUCGUAGAAGGACAAGA	3	40	68	10	9	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4582445-4583039	Cluster_6024	Pocillopora_meandrina_HIv1___Sc0000029	4582445	4583039	595	525	324	0.0	-	GAGAGAGGACGAAUUGCU	17	180	170	56	52	31	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4784112-4784538	Cluster_6025	Pocillopora_meandrina_HIv1___Sc0000029	4784112	4784538	427	131	68	1.0	+	GCUUCUAUUACCGUCAGAUCUUUGAAGAGU	35	18	98	3	8	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:81358-81775	Cluster_6026	Pocillopora_meandrina_HIv1___Sc0000030	81358	81775	418	96	1	1.0	+	CUUCCAAGACUCCAGACA	96	96	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:124220-124707	Cluster_6027	Pocillopora_meandrina_HIv1___Sc0000030	124220	124707	488	229	88	0.5152838427947598	.	AACGUGUCGAUUGUGAGUUUUCAC	18	10	151	1	11	19	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:125789-126216	Cluster_6028	Pocillopora_meandrina_HIv1___Sc0000030	125789	126216	428	98	26	0.0	-	UUAAAUGAGCUUUCGCGAUAACAUGAGGA	43	0	98	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:126305-126731	Cluster_6029	Pocillopora_meandrina_HIv1___Sc0000030	126305	126731	427	215	70	0.0	-	UCUUUCUGGAUACGGCAGCUUCUUGAA	69	10	198	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:130026-130451	Cluster_6030	Pocillopora_meandrina_HIv1___Sc0000030	130026	130451	426	128	55	0.03125	-	UCCGUUGUCACUUCGAAUCUCCUUGGGGC	24	2	121	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:131091-131516	Cluster_6031	Pocillopora_meandrina_HIv1___Sc0000030	131091	131516	426	180	62	0.4	.	UCGACACGUUCCUUGUUUACAUAAAGGC	26	0	157	0	5	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:161973-162400	Cluster_6032	Pocillopora_meandrina_HIv1___Sc0000030	161973	162400	428	102	34	0.9607843137254902	+	UUAUUUGCACUAUUGUGGAAAAUUCCUGG	16	0	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:334765-335299	Cluster_6033	Pocillopora_meandrina_HIv1___Sc0000030	334765	335299	535	869	295	0.998849252013809	+	GAAGACCAACUGUUAUGUUAAUGAAGC	51	133	511	27	44	56	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:336545-336953	Cluster_6034	Pocillopora_meandrina_HIv1___Sc0000030	336545	336953	409	245	180	0.9877551020408163	+	AACAAUAAAAUCGGCGUUACAAAAGAUA	8	66	109	31	11	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:369631-370103	Cluster_6035	Pocillopora_meandrina_HIv1___Sc0000030	369631	370103	473	354	104	0.5169491525423728	.	CAAGAACUCAGCUACCCUCGAUAUUUCCUU	54	2	332	0	12	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:430885-431895	Cluster_6036	Pocillopora_meandrina_HIv1___Sc0000030	430885	431895	1011	1316	293	0.5189969604863222	.	UCUUCCUUUUAUCUCCUGUCCUUUUUAGA	221	23	1193	8	12	24	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:487042-487466	Cluster_6037	Pocillopora_meandrina_HIv1___Sc0000030	487042	487466	425	187	83	0.17647058823529413	-	UCAGCAAUACCUAAUUCUUCGUGUAGACGU	18	5	168	0	2	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:512019-512447	Cluster_6038	Pocillopora_meandrina_HIv1___Sc0000030	512019	512447	429	331	95	0.19939577039274925	-	AUUGAUUCUAUUUUGUACGGCCUAGU	94	9	295	6	8	12	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:528530-529053	Cluster_6039	Pocillopora_meandrina_HIv1___Sc0000030	528530	529053	524	1053	168	0.9905033238366572	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	351	31	921	10	2	13	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:794156-794584	Cluster_6040	Pocillopora_meandrina_HIv1___Sc0000030	794156	794584	429	186	92	0.9946236559139785	+	UGGCAAGACAGUAGAGUUAGCAUUAUGGGA	31	31	124	11	12	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:802573-802991	Cluster_6041	Pocillopora_meandrina_HIv1___Sc0000030	802573	802991	419	140	90	1.0	+	CGGCAAGACAGUAGAGUUAGCAUUAUGGG	16	18	83	15	7	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1038303-1038717	Cluster_6042	Pocillopora_meandrina_HIv1___Sc0000030	1038303	1038717	415	138	105	0.0	-	UACUGGCUGAGUUACGACUGUGAAA	4	36	63	12	13	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1096429-1096854	Cluster_6043	Pocillopora_meandrina_HIv1___Sc0000030	1096429	1096854	426	204	139	0.0	-	GGGAAUACCGUGACUUGACA	9	51	94	13	18	17	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1302848-1303275	Cluster_6044	Pocillopora_meandrina_HIv1___Sc0000030	1302848	1303275	428	211	41	0.08530805687203792	-	UGAAACUCUGAUCUGAAAACAUUUGUC	69	16	189	5	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1409546-1410032	Cluster_6045	Pocillopora_meandrina_HIv1___Sc0000030	1409546	1410032	487	1513	328	1.0	+	ACACUCAUUGCUGUGUUUAUUCUUGACAUG	201	83	1283	20	28	33	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1504933-1505382	Cluster_6046	Pocillopora_meandrina_HIv1___Sc0000030	1504933	1505382	450	150	52	0.0	-	UUAGUUGUUAAAACGGCUGCUCU	17	18	16	15	43	45	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1620499-1621066	Cluster_6047	Pocillopora_meandrina_HIv1___Sc0000030	1620499	1621066	568	790	249	0.016455696202531647	-	UGACUCGUGUUAGUGCUCGGUGCUUCG	97	11	754	0	0	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1621328-1621755	Cluster_6048	Pocillopora_meandrina_HIv1___Sc0000030	1621328	1621755	428	118	53	0.01694915254237288	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	27	0	113	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1623897-1624427	Cluster_6049	Pocillopora_meandrina_HIv1___Sc0000030	1623897	1624427	531	577	233	0.010398613518197574	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	27	3	564	3	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1624548-1624977	Cluster_6050	Pocillopora_meandrina_HIv1___Sc0000030	1624548	1624977	430	614	140	0.02280130293159609	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	139	1	602	3	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2184565-2184991	Cluster_6051	Pocillopora_meandrina_HIv1___Sc0000030	2184565	2184991	427	245	50	0.9918367346938776	+	UAAUCGUUGGCUUUUUCUCGAGACGUG	81	4	235	2	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2250965-2251677	Cluster_6052	Pocillopora_meandrina_HIv1___Sc0000030	2250965	2251677	713	368	133	0.7065217391304348	.	UUUUGCAGUUGAACUUAAGGAACAUAGC	45	5	321	14	3	2	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2351724-2352244	Cluster_6053	Pocillopora_meandrina_HIv1___Sc0000030	2351724	2352244	521	2449	193	0.0012249897917517355	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	926	7	2434	0	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2352347-2352778	Cluster_6054	Pocillopora_meandrina_HIv1___Sc0000030	2352347	2352778	432	2880	175	0.004166666666666667	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	1048	2	2875	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2441886-2442310	Cluster_6055	Pocillopora_meandrina_HIv1___Sc0000030	2441886	2442310	425	92	36	0.9782608695652174	+	UGUGUAGAUAUGUCUUUUGGACAGGA	22	1	90	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2443025-2443803	Cluster_6056	Pocillopora_meandrina_HIv1___Sc0000030	2443025	2443803	779	765	273	0.938562091503268	+	UGACGAUUGGUGUGAGUAGCUCAGCAC	41	7	695	4	5	10	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2455657-2457394	Cluster_6057	Pocillopora_meandrina_HIv1___Sc0000030	2455657	2457394	1738	2753	1058	0.9545949872865964	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	100	20	2617	14	17	45	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2530379-2530788	Cluster_6058	Pocillopora_meandrina_HIv1___Sc0000030	2530379	2530788	410	132	64	0.5606060606060606	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	16	5	119	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2535115-2535893	Cluster_6059	Pocillopora_meandrina_HIv1___Sc0000030	2535115	2535893	779	2222	541	0.2304230423042304	.	UUUUCCAUUUCGUCUUUCAGAAAGCUGAU	183	29	2050	6	15	41	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2541437-2541859	Cluster_6060	Pocillopora_meandrina_HIv1___Sc0000030	2541437	2541859	423	532	60	0.9755639097744361	+	UUCGCGUCUGAAGCUGUUAGAGU	239	54	12	7	96	349	14	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2552048-2553299	Cluster_6061	Pocillopora_meandrina_HIv1___Sc0000030	2552048	2553299	1252	13704	1093	0.030356100408639813	-	UUUGUAGGCUCUAACAGUACAUUGUU	4348	187	13203	29	47	57	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2561843-2563369	Cluster_6062	Pocillopora_meandrina_HIv1___Sc0000030	2561843	2563369	1527	18529	1838	0.04117869285984133	-	UUUGUAGGCUCUAACAGUACAUUGUU	4417	277	17574	39	66	102	471	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2574974-2575596	Cluster_6063	Pocillopora_meandrina_HIv1___Sc0000030	2574974	2575596	623	605	214	0.996694214876033	+	UGUAUUGUAGCCGUAAGAUUCCUUUUGGAUC	122	2	587	2	2	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2575919-2576424	Cluster_6064	Pocillopora_meandrina_HIv1___Sc0000030	2575919	2576424	506	1710	211	0.9994152046783625	+	UGAAACUCUUUGUAUAAUGUACGUAUCCGG	721	5	1698	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2583026-2583561	Cluster_6065	Pocillopora_meandrina_HIv1___Sc0000030	2583026	2583561	536	308	152	0.21753246753246752	.	UACCAGAUCUAGCAAUUAUAGAAGUAUGCC	21	7	272	1	1	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2588002-2588429	Cluster_6066	Pocillopora_meandrina_HIv1___Sc0000030	2588002	2588429	428	135	41	0.9777777777777777	+	AUGUUUACCAGAGUCGAAAUGAAUCGCC	25	0	129	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2592360-2592803	Cluster_6067	Pocillopora_meandrina_HIv1___Sc0000030	2592360	2592803	444	418	155	0.9066985645933014	+	UGAUGAUAUUUCAGUGAUCACUUUUCUGUU	150	6	388	1	2	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2599239-2599668	Cluster_6068	Pocillopora_meandrina_HIv1___Sc0000030	2599239	2599668	430	115	30	1.0	+	AACCACUGCAGAGCCAUAGAAACUUUUUGU	59	3	111	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2616784-2617213	Cluster_6069	Pocillopora_meandrina_HIv1___Sc0000030	2616784	2617213	430	247	112	0.9230769230769231	+	UGGAGUAAUUGGAUCUUGUUCAUCAGAGU	16	5	223	3	3	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2627661-2628089	Cluster_6070	Pocillopora_meandrina_HIv1___Sc0000030	2627661	2628089	429	233	44	0.12446351931330472	-	UAAUCGACGAAUACAAUCCAGGUAUAACC	85	5	196	1	0	20	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2666798-2667352	Cluster_6071	Pocillopora_meandrina_HIv1___Sc0000030	2666798	2667352	555	308	179	1.0	+	CCUUAUGCCAAGACUGUGUUAAAACA	34	45	221	13	9	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3024772-3025324	Cluster_6072	Pocillopora_meandrina_HIv1___Sc0000030	3024772	3025324	553	213	73	0.92018779342723	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	32	0	186	0	6	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3025677-3026275	Cluster_6073	Pocillopora_meandrina_HIv1___Sc0000030	3025677	3026275	599	1495	263	0.8180602006688963	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	502	8	1415	7	8	15	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3073309-3073771	Cluster_6074	Pocillopora_meandrina_HIv1___Sc0000030	3073309	3073771	463	816	285	0.0012254901960784314	-	AGGGAUGGUGAAAUUCAUAGUUCUGAGGCA	181	88	605	27	31	36	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3271465-3271884	Cluster_6075	Pocillopora_meandrina_HIv1___Sc0000030	3271465	3271884	420	195	5	0.0	-	GAAGUUCUGGUUUUAAAAAA	84	193	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3297483-3297915	Cluster_6076	Pocillopora_meandrina_HIv1___Sc0000030	3297483	3297915	433	202	73	0.8217821782178217	+	UCGAUUCAAAUUUGACAGUGGCGUGGUUCUU	25	13	168	12	4	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3306544-3306971	Cluster_6077	Pocillopora_meandrina_HIv1___Sc0000030	3306544	3306971	428	135	71	0.1037037037037037	-	UAGGACGCGUUGUGCGAACUCUAAUCGCUU	8	4	121	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3427575-3427996	Cluster_6078	Pocillopora_meandrina_HIv1___Sc0000030	3427575	3427996	422	124	16	0.008064516129032258	-	UCGAAUCCCACUCCUGACACCA	72	31	0	14	73	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3477520-3478057	Cluster_6079	Pocillopora_meandrina_HIv1___Sc0000030	3477520	3478057	538	657	71	0.0060882800608828	-	UGGUAAAAUUCUGUUCAAAGUAGGUGU	193	2	643	6	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3568440-3569613	Cluster_6080	Pocillopora_meandrina_HIv1___Sc0000030	3568440	3569613	1174	3063	656	0.37283708782239633	.	UGAUUCUGCAGACACUAAAAUAACUCCAUU	295	33	2784	17	18	85	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3772717-3773145	Cluster_6081	Pocillopora_meandrina_HIv1___Sc0000030	3772717	3773145	429	179	43	0.9888268156424581	+	UCUUGCUGAGUGACUAAUGUUAGUUCGUA	82	0	167	10	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4047045-4047691	Cluster_6082	Pocillopora_meandrina_HIv1___Sc0000030	4047045	4047691	647	2538	362	0.09771473601260836	-	UACACUGUGCCAAAUAGCUUGCCUUAUU	293	12	2373	4	8	92	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4091845-4093102	Cluster_6083	Pocillopora_meandrina_HIv1___Sc0000030	4091845	4093102	1258	5166	1309	0.7200929152148664	.	UGUUGUCGAUUAGCUUUGGUACACAGUU	227	66	4416	32	306	137	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4101883-4102307	Cluster_6084	Pocillopora_meandrina_HIv1___Sc0000030	4101883	4102307	425	276	57	0.5362318840579711	.	UGAAGUCGAGCUAGAAGAGGA	34	129	2	77	52	13	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4407822-4408597	Cluster_6085	Pocillopora_meandrina_HIv1___Sc0000030	4407822	4408597	776	1378	648	0.000725689404934688	-	UGGAAAUGAUGAAAAUUGGUUU	30	313	523	167	179	104	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4490492-4491404	Cluster_6086	Pocillopora_meandrina_HIv1___Sc0000030	4490492	4491404	913	1179	463	0.914334181509754	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	59	7	1120	7	8	18	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4491504-4491923	Cluster_6087	Pocillopora_meandrina_HIv1___Sc0000030	4491504	4491923	420	170	100	0.888235294117647	+	UGAGCUCGAACGAUCCAGUACUUUGUU	15	0	159	1	2	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4492125-4492539	Cluster_6088	Pocillopora_meandrina_HIv1___Sc0000030	4492125	4492539	415	179	98	0.7206703910614525	.	UCCGCUACGUUUUGCUCUCCUGGGACGUGU	13	5	151	5	2	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4493118-4494019	Cluster_6089	Pocillopora_meandrina_HIv1___Sc0000030	4493118	4494019	902	1054	328	0.905123339658444	+	UGAGACUUGUUGUUGGGUAACUGACGUG	153	4	994	7	3	17	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4494056-4496075	Cluster_6090	Pocillopora_meandrina_HIv1___Sc0000030	4494056	4496075	2020	6407	1647	0.7814889964101763	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	448	180	5762	33	44	163	225	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4522592-4523017	Cluster_6091	Pocillopora_meandrina_HIv1___Sc0000030	4522592	4523017	426	140	68	0.09285714285714286	-	UUUGACGUUCUUGCUUCUGUCUCACCAG	25	4	134	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4528996-4529423	Cluster_6092	Pocillopora_meandrina_HIv1___Sc0000030	4528996	4529423	428	110	18	0.990909090909091	+	UUGUCUACGAGAAGCCUGUCCAUUUUGU	90	7	102	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4530096-4530525	Cluster_6093	Pocillopora_meandrina_HIv1___Sc0000030	4530096	4530525	430	2261	80	0.9792127377266696	+	UUAACUCCACGGUGCCAAUGACUUUCUU	785	5	2230	5	4	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:189661-190090	Cluster_6094	Pocillopora_meandrina_HIv1___Sc0000031	189661	190090	430	187	57	0.9946524064171123	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	51	1	180	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:228829-229279	Cluster_6095	Pocillopora_meandrina_HIv1___Sc0000031	228829	229279	451	654	147	0.9984709480122325	+	GACGAGGUGGCCGAGUGG	156	508	73	16	18	30	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:308440-308869	Cluster_6096	Pocillopora_meandrina_HIv1___Sc0000031	308440	308869	430	124	57	0.10483870967741936	-	AAAGUUAUGAAUAAAAGGAUCUCUGAAGUG	25	0	109	0	1	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:840572-840994	Cluster_6097	Pocillopora_meandrina_HIv1___Sc0000031	840572	840994	423	287	199	0.003484320557491289	-	GAGGUGCUAGAACAAGACA	11	74	111	27	44	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:852697-853125	Cluster_6098	Pocillopora_meandrina_HIv1___Sc0000031	852697	853125	429	114	41	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	32	0	100	2	1	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:855373-855797	Cluster_6099	Pocillopora_meandrina_HIv1___Sc0000031	855373	855797	425	94	50	0.1702127659574468	-	UCUUUCCAUUUACAGACUCAAGUGGCUGU	17	0	90	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:857199-857628	Cluster_6100	Pocillopora_meandrina_HIv1___Sc0000031	857199	857628	430	350	36	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	135	0	350	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:950692-951110	Cluster_6101	Pocillopora_meandrina_HIv1___Sc0000031	950692	951110	419	1595	11	0.0	-	UAUUAGUGCUGUAGGUGAA	1441	1595	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:978864-979284	Cluster_6102	Pocillopora_meandrina_HIv1___Sc0000031	978864	979284	421	80	14	0.0125	-	AGACGAAGGACUAACGCUCGAAA	18	10	0	9	15	35	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1353862-1354290	Cluster_6103	Pocillopora_meandrina_HIv1___Sc0000031	1353862	1354290	429	267	60	0.9250936329588015	+	GUGUAGAUCAGCCGACUUCAAUAUGUUU	76	11	232	6	7	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1455545-1456179	Cluster_6104	Pocillopora_meandrina_HIv1___Sc0000031	1455545	1456179	635	888	386	0.7916666666666666	.	UGACAUUAAAUUGGUUAGGAACACGAG	43	21	759	6	7	35	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1456417-1457074	Cluster_6105	Pocillopora_meandrina_HIv1___Sc0000031	1456417	1457074	658	1146	332	0.9275741710296684	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	116	6	1086	5	5	24	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1584679-1585096	Cluster_6106	Pocillopora_meandrina_HIv1___Sc0000031	1584679	1585096	418	1291	16	0.0	-	UCCCCGCAUCUCCACCAC	1001	1291	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1782267-1782706	Cluster_6107	Pocillopora_meandrina_HIv1___Sc0000031	1782267	1782706	440	1562	159	0.9974391805377721	+	GACGAGGUGGCCGAGUGG	392	1450	47	21	18	14	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1938096-1938628	Cluster_6108	Pocillopora_meandrina_HIv1___Sc0000031	1938096	1938628	533	397	127	0.2770780856423174	.	UGCAUUCUUUCUUUUCCACUGAAAUUCC	28	7	354	2	2	4	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2002024-2002452	Cluster_6109	Pocillopora_meandrina_HIv1___Sc0000031	2002024	2002452	429	491	85	0.9674134419551935	+	UACAAACAACAGAAUGUUCGAACGGCU	93	10	461	5	1	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2010004-2010431	Cluster_6110	Pocillopora_meandrina_HIv1___Sc0000031	2010004	2010431	428	113	42	0.08849557522123894	-	UGGAAAGUUCUGUGGUAUGCAAGUCAGC	34	3	99	2	2	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2085244-2085671	Cluster_6111	Pocillopora_meandrina_HIv1___Sc0000031	2085244	2085671	428	199	104	0.9195979899497487	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	25	3	184	1	2	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2251737-2252161	Cluster_6112	Pocillopora_meandrina_HIv1___Sc0000031	2251737	2252161	425	78	19	0.038461538461538464	-	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	47	0	76	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2468718-2469138	Cluster_6113	Pocillopora_meandrina_HIv1___Sc0000031	2468718	2469138	421	81	33	0.9876543209876543	+	UUUUACGCAUGGGCUUUGAUGGUAUAUCA	12	1	60	2	3	13	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2469935-2470363	Cluster_6114	Pocillopora_meandrina_HIv1___Sc0000031	2469935	2470363	429	2714	97	1.0	+	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1660	6	2701	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2470534-2470951	Cluster_6115	Pocillopora_meandrina_HIv1___Sc0000031	2470534	2470951	418	84	42	1.0	+	UGACGUCCAAACGAGCCUGAUCUUGAU	10	0	81	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2609712-2610141	Cluster_6116	Pocillopora_meandrina_HIv1___Sc0000031	2609712	2610141	430	164	29	0.0	-	AAAAUACUGAAGUGUGCUAGUAAUGAUGAC	101	3	160	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2621728-2622157	Cluster_6117	Pocillopora_meandrina_HIv1___Sc0000031	2621728	2622157	430	2787	122	1.0	+	GUGAUAAGAAACAUGCUCUGAGCUU	913	585	1725	122	60	225	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2642438-2642850	Cluster_6118	Pocillopora_meandrina_HIv1___Sc0000031	2642438	2642850	413	167	116	0.9880239520958084	+	AUUACCGUUGCUACGCGGAUGAAGAGGCU	8	47	58	16	17	21	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2645498-2645920	Cluster_6119	Pocillopora_meandrina_HIv1___Sc0000031	2645498	2645920	423	257	178	0.9922178988326849	+	GGCUAAAAGGACGUGUCACACUCAACA	6	58	107	31	16	20	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2651920-2652333	Cluster_6120	Pocillopora_meandrina_HIv1___Sc0000031	2651920	2652333	414	228	167	0.9912280701754386	+	GUGUGGAGUCCUGUAAAACCAUUUUGGCUU	7	52	119	20	12	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2661084-2661506	Cluster_6121	Pocillopora_meandrina_HIv1___Sc0000031	2661084	2661506	423	265	184	1.0	+	GGAUGGAGUCUGAAGAAUU	7	68	102	13	34	29	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2663002-2663419	Cluster_6122	Pocillopora_meandrina_HIv1___Sc0000031	2663002	2663419	418	229	144	1.0	+	UUCAUGGUGACAACUUUGACUGGACA	8	64	88	27	22	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2665651-2666077	Cluster_6123	Pocillopora_meandrina_HIv1___Sc0000031	2665651	2666077	427	269	179	1.0	+	AGGGACUGCGUGGAAAGCU	14	91	91	21	26	9	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2666312-2666858	Cluster_6124	Pocillopora_meandrina_HIv1___Sc0000031	2666312	2666858	547	300	207	1.0	+	GACAUAGCGAUCGAUGACAUAACAU	7	55	146	37	28	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2671864-2672313	Cluster_6125	Pocillopora_meandrina_HIv1___Sc0000031	2671864	2672313	450	198	132	1.0	+	CGUGGCAAAAAGUUGGCUCUCA	7	29	85	15	25	24	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2688633-2689044	Cluster_6126	Pocillopora_meandrina_HIv1___Sc0000031	2688633	2689044	412	221	174	0.995475113122172	+	GACGACUGUGGUGAUAACUCAGAUGAAGU	6	47	99	9	23	26	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2689283-2689700	Cluster_6127	Pocillopora_meandrina_HIv1___Sc0000031	2689283	2689700	418	192	144	1.0	+	GGGACCUAUGUUCGACCACACUCUC	5	45	100	9	13	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2691784-2692205	Cluster_6128	Pocillopora_meandrina_HIv1___Sc0000031	2691784	2692205	422	196	108	1.0	+	CAAGAGCGGCAGUGCCUGGACU	17	50	53	12	42	22	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2693225-2693644	Cluster_6129	Pocillopora_meandrina_HIv1___Sc0000031	2693225	2693644	420	231	182	1.0	+	GAUUUCUCUGAUGAUUGUGGUGAUGAGAG	4	54	88	24	23	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2693729-2694134	Cluster_6130	Pocillopora_meandrina_HIv1___Sc0000031	2693729	2694134	406	156	109	0.9935897435897436	+	GACAGGACCGUUGAAGGGA	6	52	46	17	10	15	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2694854-2695659	Cluster_6131	Pocillopora_meandrina_HIv1___Sc0000031	2694854	2695659	806	550	379	1.0	+	AACAUCGGAUAUCUGCAGGU	11	136	217	55	61	53	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2695761-2696217	Cluster_6132	Pocillopora_meandrina_HIv1___Sc0000031	2695761	2696217	457	270	199	1.0	+	UCCGGUGCGAUAGUGGACACC	5	70	97	32	23	30	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2698212-2698629	Cluster_6133	Pocillopora_meandrina_HIv1___Sc0000031	2698212	2698629	418	228	136	0.9956140350877193	+	CAAAGGAUAUGUGCAACUGGAGUAACUCCA	12	65	92	26	9	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2701372-2701781	Cluster_6134	Pocillopora_meandrina_HIv1___Sc0000031	2701372	2701781	410	197	137	1.0	+	GUUCGGCUGCGUCAGUGAUGGCA	5	50	82	17	12	22	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2703836-2704284	Cluster_6135	Pocillopora_meandrina_HIv1___Sc0000031	2703836	2704284	449	253	145	1.0	+	CAGUCAGGGACCUUGCGACU	13	90	53	34	26	27	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2704508-2704953	Cluster_6136	Pocillopora_meandrina_HIv1___Sc0000031	2704508	2704953	446	323	241	1.0	+	AUAUGCAGAACGUGUGGAGCAAAGUU	6	77	149	19	33	21	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2705918-2706347	Cluster_6137	Pocillopora_meandrina_HIv1___Sc0000031	2705918	2706347	430	269	169	1.0	+	CAGACGAAGGCAACUGUGCAAAGACUC	6	65	96	26	36	20	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2708474-2708898	Cluster_6138	Pocillopora_meandrina_HIv1___Sc0000031	2708474	2708898	425	277	205	1.0	+	GAACAUGGUCUAUGUCUGUACU	6	54	146	26	18	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2710377-2710796	Cluster_6139	Pocillopora_meandrina_HIv1___Sc0000031	2710377	2710796	420	285	198	1.0	+	AAAAUGACUGUGGAGACAACU	11	65	100	38	17	33	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2713483-2713891	Cluster_6140	Pocillopora_meandrina_HIv1___Sc0000031	2713483	2713891	409	143	99	1.0	+	GAACAUGGGAUAUCUGAAGGU	9	43	38	21	11	24	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2714892-2715406	Cluster_6141	Pocillopora_meandrina_HIv1___Sc0000031	2714892	2715406	515	405	206	1.0	+	CAGGACUGUACUGAUGGCGAAGAUGAACUC	74	71	241	21	23	22	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2718804-2719218	Cluster_6142	Pocillopora_meandrina_HIv1___Sc0000031	2718804	2719218	415	263	197	1.0	+	GCAUCCGACUGUGGCCGGC	8	96	76	29	22	20	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2719463-2720011	Cluster_6143	Pocillopora_meandrina_HIv1___Sc0000031	2719463	2720011	549	303	194	0.9933993399339934	+	AACGGUGUGGAUUGCCAGAGAGCU	9	73	126	33	20	17	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2723551-2723968	Cluster_6144	Pocillopora_meandrina_HIv1___Sc0000031	2723551	2723968	418	139	97	1.0	+	AAUUACAACGGUGCAAGAUGUCAGAACUGUA	5	26	64	15	12	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2724656-2725076	Cluster_6145	Pocillopora_meandrina_HIv1___Sc0000031	2724656	2725076	421	169	101	0.9940828402366864	+	CUUCUGACUAUGUCGGCCAACGAUGUGACA	21	36	95	11	9	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2728504-2728925	Cluster_6146	Pocillopora_meandrina_HIv1___Sc0000031	2728504	2728925	422	213	150	0.9953051643192489	+	GAAAACGAGACUAGAAGAACAUUGCUGUCU	5	44	91	26	23	15	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2755644-2756062	Cluster_6147	Pocillopora_meandrina_HIv1___Sc0000031	2755644	2756062	419	69	19	0.014492753623188406	-	UAGACAGAUACAAACUCCGAGGAGGAA	33	0	66	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3008660-3009271	Cluster_6148	Pocillopora_meandrina_HIv1___Sc0000031	3008660	3009271	612	1778	640	0.0	-	GUUGUGAUCACUGGAGUAGUUAGGACAGU	73	478	760	143	89	154	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3010333-3010901	Cluster_6149	Pocillopora_meandrina_HIv1___Sc0000031	3010333	3010901	569	1067	374	0.0	-	ACCUUCCCUUUAAAAGCACCACACU	100	129	647	42	79	84	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3146486-3146911	Cluster_6150	Pocillopora_meandrina_HIv1___Sc0000031	3146486	3146911	426	138	61	0.07971014492753623	-	UGUUGCAUACAAGAUCUCCUGGUUGUAAGA	26	0	129	0	6	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3147356-3148464	Cluster_6151	Pocillopora_meandrina_HIv1___Sc0000031	3147356	3148464	1109	916	467	0.2445414847161572	.	UUUGUAUCUUUCGGGUUUGAUUCCAGUA	43	16	853	4	8	12	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3160689-3161116	Cluster_6152	Pocillopora_meandrina_HIv1___Sc0000031	3160689	3161116	428	102	7	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	69	0	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3163105-3164498	Cluster_6153	Pocillopora_meandrina_HIv1___Sc0000031	3163105	3164498	1394	1297	368	0.938319198149576	+	UCAAAUACAACACCAAAAGAC	302	52	840	357	14	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3181659-3182070	Cluster_6154	Pocillopora_meandrina_HIv1___Sc0000031	3181659	3182070	412	128	79	0.6484375	.	UUGUCGGGAUAUGUAGUUGCA	13	49	4	51	19	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3190502-3190919	Cluster_6155	Pocillopora_meandrina_HIv1___Sc0000031	3190502	3190919	418	214	152	0.0	-	CCUCUGUAGAUUAGUAAAUGGGCU	8	55	71	21	12	32	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3198438-3198859	Cluster_6156	Pocillopora_meandrina_HIv1___Sc0000031	3198438	3198859	422	94	27	0.0	-	AAGGGCAAGGAUGACAAUUACAUU	27	4	10	6	17	25	32	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3318396-3318825	Cluster_6157	Pocillopora_meandrina_HIv1___Sc0000031	3318396	3318825	430	220	56	0.7	.	UAGUGUUUGUAUUGUUGGAAUAAAUGGUCA	44	14	198	5	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3335146-3335573	Cluster_6158	Pocillopora_meandrina_HIv1___Sc0000031	3335146	3335573	428	189	82	0.9947089947089947	+	UUUGAUUGACGUACGGUAUUUGAGACGC	23	2	183	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3369381-3369798	Cluster_6159	Pocillopora_meandrina_HIv1___Sc0000031	3369381	3369798	418	131	39	0.0	-	UAAUAUGUGAUGAACUUA	51	88	42	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3548527-3549585	Cluster_6160	Pocillopora_meandrina_HIv1___Sc0000031	3548527	3549585	1059	4971	748	0.19694226513779922	-	UGUAAGUGCAUCUGUUGACUUUUGAAGA	1770	29	4512	23	225	75	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3551577-3552004	Cluster_6161	Pocillopora_meandrina_HIv1___Sc0000031	3551577	3552004	428	200	77	0.1	-	UUAAAUGGCUUGUAAUGACUAAUAAACA	39	0	196	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3651114-3651647	Cluster_6162	Pocillopora_meandrina_HIv1___Sc0000031	3651114	3651647	534	798	229	0.0012531328320802004	-	UUUGCCCUUAGAGGUGUUGCUCUUCA	87	43	380	45	83	177	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3673548-3673976	Cluster_6163	Pocillopora_meandrina_HIv1___Sc0000031	3673548	3673976	429	178	86	0.03932584269662921	-	UGACACCAUAGUGCUCUAACUUCUGUAA	15	0	162	1	6	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3674203-3674615	Cluster_6164	Pocillopora_meandrina_HIv1___Sc0000031	3674203	3674615	413	91	47	0.01098901098901099	-	UUCUGACAGGUGACGAUUUUCGCGGCUC	10	0	89	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3863646-3864066	Cluster_6165	Pocillopora_meandrina_HIv1___Sc0000031	3863646	3864066	421	78	27	0.9871794871794872	+	CCAGGACAUAUUUUCGUUAACCGGUACACC	21	6	53	1	2	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3872536-3872950	Cluster_6166	Pocillopora_meandrina_HIv1___Sc0000031	3872536	3872950	415	150	95	0.36	.	UCUUCUCUUUUGUGCGGACA	9	81	10	40	13	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3882014-3882836	Cluster_6167	Pocillopora_meandrina_HIv1___Sc0000031	3882014	3882836	823	606	92	0.9983498349834984	+	CCAGGAUAUAGAAUGUUGGUUUGCACUGC	141	6	518	2	5	3	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3894259-3894687	Cluster_6168	Pocillopora_meandrina_HIv1___Sc0000031	3894259	3894687	429	225	53	0.9733333333333334	+	UGCAUGUGCUUUGUCUUGGAUUUCAUAGU	43	6	210	1	4	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3894807-3895230	Cluster_6169	Pocillopora_meandrina_HIv1___Sc0000031	3894807	3895230	424	147	60	0.7551020408163265	.	UGUUACAAAACCAUUAGAACUAUCAGU	18	3	117	0	3	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3896115-3897020	Cluster_6170	Pocillopora_meandrina_HIv1___Sc0000031	3896115	3897020	906	2124	502	0.7951977401129944	.	UCCUGACAUGAUUCUUUGAGUUCUUUC	239	39	1895	20	20	46	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3902209-3902722	Cluster_6171	Pocillopora_meandrina_HIv1___Sc0000031	3902209	3902722	514	4543	358	0.9267004182258419	+	UUAUAUCUUCGGUCAAAAAGUGCACUUU	1291	8	4394	10	6	8	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3958888-3959317	Cluster_6172	Pocillopora_meandrina_HIv1___Sc0000031	3958888	3959317	430	86	20	0.9767441860465116	+	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	47	2	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4007449-4007866	Cluster_6173	Pocillopora_meandrina_HIv1___Sc0000031	4007449	4007866	418	143	8	0.027972027972027972	-	CGGCCUGAAAAAAAAAAA	127	141	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4019453-4019988	Cluster_6174	Pocillopora_meandrina_HIv1___Sc0000031	4019453	4019988	536	2960	388	0.0	-	AUCCUCCUUUGUUCCAGUGGCUGUGUU	490	146	2401	50	65	67	231	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4163166-4163593	Cluster_6175	Pocillopora_meandrina_HIv1___Sc0000031	4163166	4163593	428	101	26	1.0	+	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	22	0	100	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4293756-4294176	Cluster_6176	Pocillopora_meandrina_HIv1___Sc0000031	4293756	4294176	421	82	34	0.012195121951219513	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUUG	14	1	76	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4501137-4501681	Cluster_6177	Pocillopora_meandrina_HIv1___Sc0000031	4501137	4501681	545	2817	351	0.9996450124245652	+	UUUGCCUUGAUAAGUGUUGCUCUGUCA	436	76	2154	22	132	371	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:4496-5713	Cluster_6178	Pocillopora_meandrina_HIv1___Sc0000032	4496	5713	1218	8339	702	0.9254107207099173	+	UGACGGAAAAGCGAUUCUCCCCUGACAAGGC	2027	46	7905	19	23	201	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:35625-36052	Cluster_6179	Pocillopora_meandrina_HIv1___Sc0000032	35625	36052	428	320	87	0.959375	+	UGACUAUUCAACAGCUGUUCUUCUACCA	55	3	289	1	2	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:554647-555065	Cluster_6180	Pocillopora_meandrina_HIv1___Sc0000032	554647	555065	419	134	44	0.9776119402985075	+	UGAAAAACUGUGACCGAGGU	14	79	5	20	27	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:591284-591713	Cluster_6181	Pocillopora_meandrina_HIv1___Sc0000032	591284	591713	430	294	63	0.04421768707482993	-	UGAACAAGUGAGCAAGAUGAUCUUCAUGAA	121	0	292	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:592847-593274	Cluster_6182	Pocillopora_meandrina_HIv1___Sc0000032	592847	593274	428	122	42	0.03278688524590164	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	17	1	115	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:705796-706224	Cluster_6183	Pocillopora_meandrina_HIv1___Sc0000032	705796	706224	429	185	53	0.10810810810810811	-	AUCUAAACGAACUUGUUUUUCUUAUGAACA	41	3	170	1	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:732298-734035	Cluster_6184	Pocillopora_meandrina_HIv1___Sc0000032	732298	734035	1738	2773	1099	0.04507753335737468	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	90	15	2625	9	32	44	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:906845-907277	Cluster_6185	Pocillopora_meandrina_HIv1___Sc0000032	906845	907277	433	3768	226	1.0	+	GGGGAUGUAGCUCAGUGGU	1089	2205	1055	138	46	73	251	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:976628-977084	Cluster_6186	Pocillopora_meandrina_HIv1___Sc0000032	976628	977084	457	232	154	0.01293103448275862	-	GCCAGUACUGUGGAAAAUGCU	6	72	76	32	20	20	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:977545-977958	Cluster_6187	Pocillopora_meandrina_HIv1___Sc0000032	977545	977958	414	223	155	0.0	-	GGCAAGCAGUUGGAAGAUGGACGUACC	12	59	97	17	23	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:978626-979054	Cluster_6188	Pocillopora_meandrina_HIv1___Sc0000032	978626	979054	429	172	108	0.0	-	CUCUGACUGGGAAGACCAU	10	60	60	13	9	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1020496-1020906	Cluster_6189	Pocillopora_meandrina_HIv1___Sc0000032	1020496	1020906	411	188	120	0.10638297872340426	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	27	4	176	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1022750-1023800	Cluster_6190	Pocillopora_meandrina_HIv1___Sc0000032	1022750	1023800	1051	710	354	0.7577464788732394	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	28	3	671	3	1	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1024060-1024490	Cluster_6191	Pocillopora_meandrina_HIv1___Sc0000032	1024060	1024490	431	653	217	0.9111791730474732	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	89	4	571	2	3	6	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1084086-1085479	Cluster_6192	Pocillopora_meandrina_HIv1___Sc0000032	1084086	1085479	1394	13754	5092	0.9994183510251563	+	CGAAGAUGUGGAUCUGAGCUCU	86	3168	5979	1091	1348	1078	1090	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1118221-1118753	Cluster_6193	Pocillopora_meandrina_HIv1___Sc0000032	1118221	1118753	533	420	174	0.10714285714285714	-	UUGGACCAAGAUAGGCUGCUUUAGCAAG	40	7	396	1	2	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1287750-1288194	Cluster_6194	Pocillopora_meandrina_HIv1___Sc0000032	1287750	1288194	445	328	160	0.9939024390243902	+	GGAGAGAAGUCCUUUGAAUCCUUUGAAAGA	22	34	242	13	8	18	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1289450-1289886	Cluster_6195	Pocillopora_meandrina_HIv1___Sc0000032	1289450	1289886	437	191	129	1.0	+	GUUUAGCUGCGAUGUAUUUUCUGUG	10	46	78	25	15	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1290726-1291992	Cluster_6196	Pocillopora_meandrina_HIv1___Sc0000032	1290726	1291992	1267	1000	576	0.998	+	GUGGAUAAACCUGACGGCCUUGCAGUU	20	251	426	58	95	100	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1292775-1293294	Cluster_6197	Pocillopora_meandrina_HIv1___Sc0000032	1292775	1293294	520	630	429	1.0	+	GGAAACUGAAGGCUCAGCACGGUG	8	132	270	55	66	55	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1293438-1293865	Cluster_6198	Pocillopora_meandrina_HIv1___Sc0000032	1293438	1293865	428	367	272	1.0	+	UAAGAACCUCUUCCCCCA	7	88	181	18	28	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1327328-1327740	Cluster_6199	Pocillopora_meandrina_HIv1___Sc0000032	1327328	1327740	413	172	98	1.0	+	UUAGAUCGUUCAUGGUUGCAUUCGUGA	9	0	170	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1332112-1332539	Cluster_6200	Pocillopora_meandrina_HIv1___Sc0000032	1332112	1332539	428	105	24	1.0	+	UCGGUAGAAUCCUUAACAAA	19	20	82	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1333095-1333525	Cluster_6201	Pocillopora_meandrina_HIv1___Sc0000032	1333095	1333525	431	338	63	0.9970414201183432	+	CAUAAUCUGACACUUUACCUCGCCUUUAGUU	70	1	331	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1334774-1335201	Cluster_6202	Pocillopora_meandrina_HIv1___Sc0000032	1334774	1335201	428	107	30	1.0	+	UGUGCCAAAGGUUUAGAACGAAAGAACG	31	0	105	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1335767-1336197	Cluster_6203	Pocillopora_meandrina_HIv1___Sc0000032	1335767	1336197	431	560	94	1.0	+	CACCAAAACUGUACACAUCAACCUUAAAA	154	5	538	1	2	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1336655-1337342	Cluster_6204	Pocillopora_meandrina_HIv1___Sc0000032	1336655	1337342	688	710	268	0.9619718309859155	+	UUCUAUGGUAUGCAAGUCAGCAUGACUCAGC	60	35	657	3	1	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1338475-1339347	Cluster_6205	Pocillopora_meandrina_HIv1___Sc0000032	1338475	1339347	873	1184	262	0.9864864864864865	+	UCGGAUAUAAGGCGGUUAUCAAGCGCUCA	127	11	1139	4	6	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1553445-1553862	Cluster_6206	Pocillopora_meandrina_HIv1___Sc0000032	1553445	1553862	418	153	16	0.006535947712418301	-	CUGAGAUUGCUGUAGGCG	94	152	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1645914-1646410	Cluster_6207	Pocillopora_meandrina_HIv1___Sc0000032	1645914	1646410	497	1551	295	0.9664732430689877	+	AAUGGGAAAACGAGAACAGCGUGA	205	30	871	27	21	266	336	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1728758-1729173	Cluster_6208	Pocillopora_meandrina_HIv1___Sc0000032	1728758	1729173	416	137	70	0.043795620437956206	-	AGAGUUUUGAAGUAAAUCGGCGAAUCGUU	14	1	116	1	1	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1742364-1742801	Cluster_6209	Pocillopora_meandrina_HIv1___Sc0000032	1742364	1742801	438	302	120	0.26158940397350994	.	UUAUUUCCUUCUCAACUGUCCGUCACC	28	14	229	6	13	27	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1891335-1891765	Cluster_6210	Pocillopora_meandrina_HIv1___Sc0000032	1891335	1891765	431	93	10	1.0	+	GGUAAAUCCAUUGGAGAGAUUUGAGCUCGUG	73	4	88	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1997294-1997767	Cluster_6211	Pocillopora_meandrina_HIv1___Sc0000032	1997294	1997767	474	6214	456	0.9996781461216607	+	GCGACAGUGGUGUAACGGUUAUCAUGGC	1230	1807	3730	60	150	272	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2121789-2122217	Cluster_6212	Pocillopora_meandrina_HIv1___Sc0000032	2121789	2122217	429	94	15	0.9893617021276596	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	0	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2230250-2230656	Cluster_6213	Pocillopora_meandrina_HIv1___Sc0000032	2230250	2230656	407	211	99	0.24170616113744076	.	UCUUCAUAAUGUCUCUAGGCCUCGCUU	18	6	165	4	21	0	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2274262-2274682	Cluster_6214	Pocillopora_meandrina_HIv1___Sc0000032	2274262	2274682	421	167	97	0.08982035928143713	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	18	0	156	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2345790-2346721	Cluster_6215	Pocillopora_meandrina_HIv1___Sc0000032	2345790	2346721	932	499	332	0.8857715430861723	+	UCAGACACGUGGAUACUUGCGAUGAAGU	21	4	451	2	5	12	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2347073-2347500	Cluster_6216	Pocillopora_meandrina_HIv1___Sc0000032	2347073	2347500	428	226	111	0.9247787610619469	+	UCUACGUCUAUCAACCAGGAAUGAAACUCGU	18	1	210	2	1	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2348233-2348660	Cluster_6217	Pocillopora_meandrina_HIv1___Sc0000032	2348233	2348660	428	190	57	0.7105263157894737	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	33	1	151	0	1	6	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2375641-2376068	Cluster_6218	Pocillopora_meandrina_HIv1___Sc0000032	2375641	2376068	428	251	93	0.6932270916334662	.	GUGUAUCCUAUGGUAACAGUUGACGUGA	30	0	242	2	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2376095-2376524	Cluster_6219	Pocillopora_meandrina_HIv1___Sc0000032	2376095	2376524	430	338	168	0.2455621301775148	.	UCCAACUCUGUUCCAGGUGACA	16	9	265	8	24	21	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2378160-2378587	Cluster_6220	Pocillopora_meandrina_HIv1___Sc0000032	2378160	2378587	428	192	68	0.052083333333333336	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	44	0	184	0	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2412513-2412940	Cluster_6221	Pocillopora_meandrina_HIv1___Sc0000032	2412513	2412940	428	195	78	0.9179487179487179	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	84	1	189	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2414703-2415381	Cluster_6222	Pocillopora_meandrina_HIv1___Sc0000032	2414703	2415381	679	423	240	0.8203309692671394	+	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	21	5	366	3	4	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2415532-2415943	Cluster_6223	Pocillopora_meandrina_HIv1___Sc0000032	2415532	2415943	412	187	136	0.7005347593582888	.	UUUUUUACCUCCAUCCGGCGAUUGUAACC	11	5	159	2	6	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2416192-2416616	Cluster_6224	Pocillopora_meandrina_HIv1___Sc0000032	2416192	2416616	425	240	105	0.7125	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	36	6	211	6	4	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2453605-2454032	Cluster_6225	Pocillopora_meandrina_HIv1___Sc0000032	2453605	2454032	428	170	93	0.07647058823529412	-	UGACGUCACGAUCUUUGCGCGCUACCAUU	21	4	158	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2461526-2463347	Cluster_6226	Pocillopora_meandrina_HIv1___Sc0000032	2461526	2463347	1822	27026	2964	0.06408643528454082	-	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2230	235	25590	78	127	375	621	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2788209-2789661	Cluster_6227	Pocillopora_meandrina_HIv1___Sc0000032	2788209	2789661	1453	1854	822	0.4336569579288026	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	96	33	1494	19	24	95	189	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2789881-2791202	Cluster_6228	Pocillopora_meandrina_HIv1___Sc0000032	2789881	2791202	1322	1993	602	0.11239337681886603	-	UCUGCGUAAAAGAUUUCUUCACUGAGU	121	22	1832	13	9	56	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2994073-2994499	Cluster_6229	Pocillopora_meandrina_HIv1___Sc0000032	2994073	2994499	427	98	23	0.05102040816326531	-	UGAUAUCAUAUUCUCUGUUUCCUCAUC	48	0	95	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3147841-3148258	Cluster_6230	Pocillopora_meandrina_HIv1___Sc0000032	3147841	3148258	418	275	10	1.0	+	UAUUAAUGCUGUAGGCUU	258	268	5	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3170627-3171054	Cluster_6231	Pocillopora_meandrina_HIv1___Sc0000032	3170627	3171054	428	186	107	0.10752688172043011	-	UAUUCCAAGAUUGGCCGUACCAGAGACA	18	0	178	2	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3217471-3217899	Cluster_6232	Pocillopora_meandrina_HIv1___Sc0000032	3217471	3217899	429	99	25	0.030303030303030304	-	AAAGAACCCGGUCACCUGUGCUGCAAAGG	57	0	92	3	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:189713-190128	Cluster_6233	Pocillopora_meandrina_HIv1___Sc0000033	189713	190128	416	122	25	1.0	+	AACUUUUGACGGUGG	45	116	4	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:205780-206208	Cluster_6234	Pocillopora_meandrina_HIv1___Sc0000033	205780	206208	429	114	35	0.0	-	AUGCAGUUGAAGAAACUAGUUAGACAAGG	27	3	107	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:352602-353035	Cluster_6235	Pocillopora_meandrina_HIv1___Sc0000033	352602	353035	434	19920	474	0.998644578313253	+	UACAACGGGGACUAGCUCCGAUCUCUCAAG	4397	19	19869	12	4	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:512579-513004	Cluster_6236	Pocillopora_meandrina_HIv1___Sc0000033	512579	513004	426	132	67	1.0	+	AUAGUGGCACCGACUUUGAAGUAUGGAUU	8	4	124	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:534254-534684	Cluster_6237	Pocillopora_meandrina_HIv1___Sc0000033	534254	534684	431	486	93	0.0102880658436214	-	UGGCUGGGAACCAACCUCGGAGAAAAUGAC	94	13	427	14	2	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:534887-535315	Cluster_6238	Pocillopora_meandrina_HIv1___Sc0000033	534887	535315	429	139	33	0.0	-	AGCAUUUCCCGAGGGUCUGACUUACGACA	36	0	138	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:542928-544164	Cluster_6239	Pocillopora_meandrina_HIv1___Sc0000033	542928	544164	1237	5224	1082	0.11581163859111791	-	UAUUUGAUCUGUCUACCUCUUUAAAGGA	255	328	4478	193	55	43	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:561022-561449	Cluster_6240	Pocillopora_meandrina_HIv1___Sc0000033	561022	561449	428	218	70	0.03669724770642202	-	UGCAUUGUAAUCGGGAUAGACCUAUUGA	38	5	202	4	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:586365-586786	Cluster_6241	Pocillopora_meandrina_HIv1___Sc0000033	586365	586786	422	136	34	0.9705882352941176	+	UUGGAUAUCCUAACACGUGUGA	32	31	1	27	66	10	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:588867-589295	Cluster_6242	Pocillopora_meandrina_HIv1___Sc0000033	588867	589295	429	168	43	0.0	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	58	0	163	1	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:601778-602205	Cluster_6243	Pocillopora_meandrina_HIv1___Sc0000033	601778	602205	428	136	46	0.0	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	37	1	132	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:614817-615245	Cluster_6244	Pocillopora_meandrina_HIv1___Sc0000033	614817	615245	429	167	37	0.0	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	54	0	167	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:640336-640764	Cluster_6245	Pocillopora_meandrina_HIv1___Sc0000033	640336	640764	429	164	44	0.012195121951219513	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	46	1	157	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:659174-659761	Cluster_6246	Pocillopora_meandrina_HIv1___Sc0000033	659174	659761	588	3768	408	0.9856687898089171	+	UGUAGAAUCAAUCUGUUACUAAGACACC	660	15	3634	69	7	26	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:661526-662065	Cluster_6247	Pocillopora_meandrina_HIv1___Sc0000033	661526	662065	540	545	203	0.8110091743119267	+	UGUAUUCACUUGGGUUAACUCUUCCACA	119	2	533	1	4	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:670510-670940	Cluster_6248	Pocillopora_meandrina_HIv1___Sc0000033	670510	670940	431	404	52	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	118	0	401	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:677264-677694	Cluster_6249	Pocillopora_meandrina_HIv1___Sc0000033	677264	677694	431	350	48	0.005714285714285714	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	145	1	347	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:683227-683663	Cluster_6250	Pocillopora_meandrina_HIv1___Sc0000033	683227	683663	437	53117	681	7.530545776305138e-05	-	AGCAUUUCCCGAAGGUCUGACAUACGAC	11525	171	52533	133	127	68	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:703744-704547	Cluster_6251	Pocillopora_meandrina_HIv1___Sc0000033	703744	704547	804	214	47	0.0	-	UGCAAAAGAAGACGCUUGGCUGGGAACCA	69	1	212	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:719372-719799	Cluster_6252	Pocillopora_meandrina_HIv1___Sc0000033	719372	719799	428	80	20	0.0	-	UGCAAAAGAAGACGCUUGGCUGGGAACCA	50	0	79	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:719973-720403	Cluster_6253	Pocillopora_meandrina_HIv1___Sc0000033	719973	720403	431	1068	96	0.0	-	AGCAUUUCCCGAAGGUCUGACAUACGAC	188	3	1055	2	5	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:743365-743782	Cluster_6254	Pocillopora_meandrina_HIv1___Sc0000033	743365	743782	418	140	75	0.8785714285714286	+	GAGUAGAUCAGCCGACUUCAACAUGUUU	17	5	117	2	2	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:747341-747769	Cluster_6255	Pocillopora_meandrina_HIv1___Sc0000033	747341	747769	429	253	47	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	76	0	252	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:778352-778780	Cluster_6256	Pocillopora_meandrina_HIv1___Sc0000033	778352	778780	429	783	81	0.9706257982120051	+	GUGUAGAUCAGCCGACUUCAACAUGUUC	157	15	602	9	30	54	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:789485-789913	Cluster_6257	Pocillopora_meandrina_HIv1___Sc0000033	789485	789913	429	242	69	0.008264462809917356	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	58	1	238	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:794099-794535	Cluster_6258	Pocillopora_meandrina_HIv1___Sc0000033	794099	794535	437	291	105	0.013745704467353952	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	54	0	284	0	0	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:809830-810258	Cluster_6259	Pocillopora_meandrina_HIv1___Sc0000033	809830	810258	429	213	50	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	56	1	211	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:819637-820064	Cluster_6260	Pocillopora_meandrina_HIv1___Sc0000033	819637	820064	428	204	47	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	51	0	201	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:831472-831899	Cluster_6261	Pocillopora_meandrina_HIv1___Sc0000033	831472	831899	428	124	33	0.9919354838709677	+	AGCAUUUCCCGAGGGUCUAACAUACGAC	39	0	123	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:848924-849351	Cluster_6262	Pocillopora_meandrina_HIv1___Sc0000033	848924	849351	428	165	22	0.9939393939393939	+	UGAAUCGUCGAUGAGAGUGAAUAAUACU	93	0	164	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1073974-1074484	Cluster_6263	Pocillopora_meandrina_HIv1___Sc0000033	1073974	1074484	511	792	307	0.05555555555555555	-	GCCUCUCACGGACCACCA	44	456	129	74	68	41	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1123428-1123881	Cluster_6264	Pocillopora_meandrina_HIv1___Sc0000033	1123428	1123881	454	1403	91	0.0	-	UUUGCUAGUUGCUUUUGUCCCGUU	361	36	48	34	51	596	638	24	N	spi-mir-temp-25_Stylophora_pistillata_Liew_et_al._2014_Considered_bona_fideas_close_match_to_nve-_and_hma-miR-2022.;Adi-Mir-2022_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2022-3p;_nve-miR-2022-3p;_spi-miR-temp-25;eca-nve-F-miR-2022_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;ami-nve-F-miR-2022-3p_Acropora_millepora_Praher_et_al._2021_NA
Pocillopora_meandrina_HIv1___Sc0000033:1435427-1435837	Cluster_6265	Pocillopora_meandrina_HIv1___Sc0000033	1435427	1435837	411	125	64	0.504	.	UUGACCGGGUGGAAAUAAGAGAGACAGC	11	7	98	7	0	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1528802-1529229	Cluster_6266	Pocillopora_meandrina_HIv1___Sc0000033	1528802	1529229	428	178	89	0.8707865168539326	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	22	0	172	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1641798-1642214	Cluster_6267	Pocillopora_meandrina_HIv1___Sc0000033	1641798	1642214	417	133	81	0.9924812030075187	+	UGCUCAUAUCUAAUAGAACUACUGCCGUU	11	1	129	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1652824-1653255	Cluster_6268	Pocillopora_meandrina_HIv1___Sc0000033	1652824	1653255	432	679	174	0.9837997054491899	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	180	3	663	2	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1653602-1654011	Cluster_6269	Pocillopora_meandrina_HIv1___Sc0000033	1653602	1654011	410	137	81	0.8613138686131386	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	18	0	128	0	1	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1655295-1655802	Cluster_6270	Pocillopora_meandrina_HIv1___Sc0000033	1655295	1655802	508	585	226	0.5042735042735043	.	UAAGUCUGUAACCCCUGUGGCAC	157	7	319	12	5	214	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1687808-1688227	Cluster_6271	Pocillopora_meandrina_HIv1___Sc0000033	1687808	1688227	420	271	38	0.992619926199262	+	CACUCUCAUGACCACUUU	64	265	0	6	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1689820-1690239	Cluster_6272	Pocillopora_meandrina_HIv1___Sc0000033	1689820	1690239	420	126	44	0.09523809523809523	-	CCGGGCUACUUCUUCGCAGU	35	81	5	18	1	17	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1752361-1752775	Cluster_6273	Pocillopora_meandrina_HIv1___Sc0000033	1752361	1752775	415	81	24	1.0	+	UGAUAUAUGUUCAUGUUUGGGUGUAAGC	25	0	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1935370-1935788	Cluster_6274	Pocillopora_meandrina_HIv1___Sc0000033	1935370	1935788	419	4078	13	1.0	+	AACCCCGCAUCUCCACCA	3700	4078	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2087740-2088163	Cluster_6275	Pocillopora_meandrina_HIv1___Sc0000033	2087740	2088163	424	197	81	0.9746192893401016	+	UCAAAAGCUGCCGAUAAAUCUAAA	48	3	138	1	0	1	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2088176-2088602	Cluster_6276	Pocillopora_meandrina_HIv1___Sc0000033	2088176	2088602	427	151	79	0.8344370860927153	+	UCAGACUAGCAACAUGAUCUUCGGUGA	19	1	134	3	0	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2089469-2090403	Cluster_6277	Pocillopora_meandrina_HIv1___Sc0000033	2089469	2090403	935	1024	332	0.9384765625	+	UAAUGACUUCAGAGUAGACAGAGACGGU	93	10	973	8	4	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2227624-2228244	Cluster_6278	Pocillopora_meandrina_HIv1___Sc0000033	2227624	2228244	621	807	170	0.677819083023544	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	134	4	642	1	6	123	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2528639-2529055	Cluster_6279	Pocillopora_meandrina_HIv1___Sc0000033	2528639	2529055	417	126	78	0.19047619047619047	-	UUCUAGACGAGAUCUUUAGUAAAAAGCA	8	19	69	15	14	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2644755-2645166	Cluster_6280	Pocillopora_meandrina_HIv1___Sc0000033	2644755	2645166	412	158	81	0.46835443037974683	.	UUACUGAACAGACGCACGGC	30	96	6	33	12	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2647969-2648391	Cluster_6281	Pocillopora_meandrina_HIv1___Sc0000033	2647969	2648391	423	216	130	0.9814814814814815	+	GAUCAAAGUUGGCCGAGAAAGGAAAGCA	12	56	83	22	23	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2718101-2718523	Cluster_6282	Pocillopora_meandrina_HIv1___Sc0000033	2718101	2718523	423	303	225	0.0	-	UGAGUAUGUAGACAUUAAGAGACU	5	53	125	29	32	23	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2718875-2719527	Cluster_6283	Pocillopora_meandrina_HIv1___Sc0000033	2718875	2719527	653	579	420	0.0	-	AAUGACGAGAAUCGAUGAAUACGUGGACGU	12	108	311	33	40	35	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2866422-2867925	Cluster_6284	Pocillopora_meandrina_HIv1___Sc0000033	2866422	2867925	1504	1780	780	0.048314606741573035	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	67	9	1651	14	29	32	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2905215-2905624	Cluster_6285	Pocillopora_meandrina_HIv1___Sc0000033	2905215	2905624	410	90	18	0.18888888888888888	-	UGACAUCUCAUCUACAUCUACAUCUACUUU	56	3	84	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2910222-2910666	Cluster_6286	Pocillopora_meandrina_HIv1___Sc0000033	2910222	2910666	445	582	122	0.21305841924398625	.	UGUCAAAUUCUCGUCUUCCUAACCUUU	202	5	557	1	3	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3079765-3080198	Cluster_6287	Pocillopora_meandrina_HIv1___Sc0000033	3079765	3080198	434	221	77	0.0	-	UGUCUGAACUCUAAAACUUCAUUUGGGAUC	47	2	217	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3082788-3083402	Cluster_6288	Pocillopora_meandrina_HIv1___Sc0000033	3082788	3083402	615	667	244	0.3823088455772114	.	UGCAAGAACAAGUUCGCGACGUGGUAUU	111	20	603	9	10	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3084205-3084715	Cluster_6289	Pocillopora_meandrina_HIv1___Sc0000033	3084205	3084715	511	614	226	0.0016286644951140066	-	UGUAAAGCGACUGAUCUCACGUGAUAAAUG	43	6	594	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3084987-3085943	Cluster_6290	Pocillopora_meandrina_HIv1___Sc0000033	3084987	3085943	957	2146	473	0.024697110904007457	-	UUGGACUUCUUUGCUUCACCUGAGGCAGC	219	12	2066	5	13	19	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3086828-3087460	Cluster_6291	Pocillopora_meandrina_HIv1___Sc0000033	3086828	3087460	633	1617	297	0.0055658627087198514	-	UCACUCACGAUAGAAUUUUAAACAGAU	194	5	1590	0	3	14	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3093993-3096086	Cluster_6292	Pocillopora_meandrina_HIv1___Sc0000033	3093993	3096086	2094	14623	2110	0.04855364836216919	-	UGUUAGCUCGUCGACCUGAACGCCACUUUC	1540	356	13560	56	162	222	267	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3096304-3097773	Cluster_6293	Pocillopora_meandrina_HIv1___Sc0000033	3096304	3097773	1470	2019	708	0.01188707280832095	-	UAAGACAAGUACUUCAAACACUCUCUAGUAG	200	14	1932	9	8	20	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3098208-3101538	Cluster_6294	Pocillopora_meandrina_HIv1___Sc0000033	3098208	3101538	3331	9272	2425	0.16587575496117343	-	UGUUAAAUCUCCUCUAAACUUUGUAAUGA	381	162	8004	140	110	447	409	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3101625-3102139	Cluster_6295	Pocillopora_meandrina_HIv1___Sc0000033	3101625	3102139	515	7941	669	0.22301977080972168	.	UGAUUUCUCUGAUAUUACCAUCAGCGC	940	67	7244	32	293	120	185	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3102350-3102782	Cluster_6296	Pocillopora_meandrina_HIv1___Sc0000033	3102350	3102782	433	3211	252	0.015882902522578637	-	UGCACUAAGCAAUGAUUUGUCACCUGAAUU	1064	24	3160	1	3	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3102834-3103833	Cluster_6297	Pocillopora_meandrina_HIv1___Sc0000033	3102834	3103833	1000	1256	400	0.010350318471337579	-	UAAAACGAUAUUGCUGACAGAAAAAUAACA	128	15	1210	4	7	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3103946-3104677	Cluster_6298	Pocillopora_meandrina_HIv1___Sc0000033	3103946	3104677	732	3422	628	0.004091174751607247	-	UGAUCAAUCAAGGAAAAUGUCUCGUACUGUU	302	17	3346	2	9	16	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3104763-3110353	Cluster_6299	Pocillopora_meandrina_HIv1___Sc0000033	3104763	3110353	5591	31590	5581	0.0059512503956948406	-	UGCAAAGUCCCAUAUAUCCAUUGUAACAUU	1704	281	30261	189	231	307	321	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3110696-3111545	Cluster_6300	Pocillopora_meandrina_HIv1___Sc0000033	3110696	3111545	850	1745	416	0.39083094555873926	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	205	29	1664	8	5	20	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3111595-3112752	Cluster_6301	Pocillopora_meandrina_HIv1___Sc0000033	3111595	3112752	1158	2464	895	0.00040584415584415587	-	UUACCGGUUUGAUGCCAAGACAUUUGA	110	32	2273	26	34	55	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3112803-3117488	Cluster_6302	Pocillopora_meandrina_HIv1___Sc0000033	3112803	3117488	4686	61710	6116	0.0010695187165775401	-	UAGGUGCUGCCCUGCAAAUUCCCAUAUAUC	5068	2142	55111	692	1099	1473	1193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3117976-3118918	Cluster_6303	Pocillopora_meandrina_HIv1___Sc0000033	3117976	3118918	943	27541	714	0.006971424421771177	-	UGCUAUCAACUUAAAUUUAUGAACCUCACU	10757	114	26615	116	122	325	249	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3119235-3125163	Cluster_6304	Pocillopora_meandrina_HIv1___Sc0000033	3119235	3125163	5929	89385	6735	0.0007160038037702075	-	UAGGUGCUGCCCUGCAAAUUCCCAUAUAUC	18190	4786	80533	939	930	1273	924	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3125753-3126547	Cluster_6305	Pocillopora_meandrina_HIv1___Sc0000033	3125753	3126547	795	1859	485	0.0	-	UGAUCUAACUGAUGUUGACUCAUUCUGAC	113	7	1780	7	17	30	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3126776-3127230	Cluster_6306	Pocillopora_meandrina_HIv1___Sc0000033	3126776	3127230	455	325	151	0.0	-	UGAGGACUUUGCAUCAGAAAAGACAGUUGUU	35	2	305	7	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3127267-3129880	Cluster_6307	Pocillopora_meandrina_HIv1___Sc0000033	3127267	3129880	2614	8010	1802	0.0004993757802746567	-	UAUCAGCAAAGUGAAGAUAAUGUAGAACCUA	862	115	7608	37	47	115	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3130174-3130645	Cluster_6308	Pocillopora_meandrina_HIv1___Sc0000033	3130174	3130645	472	369	146	0.0	-	UCAUCCGACCUUUCGAAAUCUAGCUUGUU	42	6	360	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:32926-33504	Cluster_6309	Pocillopora_meandrina_HIv1___Sc0000034	32926	33504	579	824	108	0.0012135922330097086	-	ACUGUGUACGAACUCUGUCAAAUGGAUG	209	9	727	2	5	37	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:167436-167927	Cluster_6310	Pocillopora_meandrina_HIv1___Sc0000034	167436	167927	492	27883	992	3.586414661263135e-05	-	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	8246	794	26535	71	109	252	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:215119-215548	Cluster_6311	Pocillopora_meandrina_HIv1___Sc0000034	215119	215548	430	531	130	0.07532956685499058	-	UGCAGUAGCUUUGAAAUCGUUGGCGGGU	67	4	505	1	3	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:218602-219029	Cluster_6312	Pocillopora_meandrina_HIv1___Sc0000034	218602	219029	428	195	54	0.02564102564102564	-	UUUGAGACAUAAACUGUUCAGUUUGAGC	83	1	191	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:233012-234459	Cluster_6313	Pocillopora_meandrina_HIv1___Sc0000034	233012	234459	1448	4354	1335	0.7078548461185117	.	UGCGACUUUCCUUUUCUUUGGCACAA	210	46	3830	28	51	104	295	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:234948-235374	Cluster_6314	Pocillopora_meandrina_HIv1___Sc0000034	234948	235374	427	237	141	0.004219409282700422	-	UCGGCUAACGUUAAACUUCACAGCGUUCUUU	16	2	229	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:236037-236577	Cluster_6315	Pocillopora_meandrina_HIv1___Sc0000034	236037	236577	541	296	149	0.05405405405405406	-	UUGGACAACCUCAUGAGAGUAACCCUCGUC	20	10	268	3	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:251674-252102	Cluster_6316	Pocillopora_meandrina_HIv1___Sc0000034	251674	252102	429	162	76	0.08024691358024691	-	UUAGAUCAAUGACUUCUGAGAUGAUGCCUU	15	2	147	3	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:252438-252864	Cluster_6317	Pocillopora_meandrina_HIv1___Sc0000034	252438	252864	427	189	58	0.06878306878306878	-	UUGAAUGUUUUCUGCACUGUAGAGAAGAC	29	2	169	1	3	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:254124-254550	Cluster_6318	Pocillopora_meandrina_HIv1___Sc0000034	254124	254550	427	123	51	0.04878048780487805	-	UAAUGCUGCUUAAUUCUUCCUCCAAUAGGA	23	0	119	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:254736-255177	Cluster_6319	Pocillopora_meandrina_HIv1___Sc0000034	254736	255177	442	206	91	0.4368932038834951	.	UGAAGACAUAGUAGAAAGAUCACU	21	7	143	0	2	5	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:264353-264780	Cluster_6320	Pocillopora_meandrina_HIv1___Sc0000034	264353	264780	428	190	87	0.0	-	UAACGAUCUUGCUGUCGCUGUUGGGAGC	20	3	180	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:268956-269690	Cluster_6321	Pocillopora_meandrina_HIv1___Sc0000034	268956	269690	735	376	145	0.018617021276595744	-	UAAAUGGCCAUUAUUGAUCUCAGUACAUC	33	1	356	1	7	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:273601-274030	Cluster_6322	Pocillopora_meandrina_HIv1___Sc0000034	273601	274030	430	314	66	0.8789808917197452	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	129	9	264	2	0	2	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:281232-281664	Cluster_6323	Pocillopora_meandrina_HIv1___Sc0000034	281232	281664	433	3592	194	0.0	-	UGAACAGACUUGAUGACUACUGCAUAUGCUU	1004	1	3580	1	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:284152-284563	Cluster_6324	Pocillopora_meandrina_HIv1___Sc0000034	284152	284563	412	116	59	0.0	-	UGUGUCGACGAUAGUAACACCAGCUUGAGG	8	3	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:300245-301292	Cluster_6325	Pocillopora_meandrina_HIv1___Sc0000034	300245	301292	1048	4574	625	0.0006558810668998689	-	UGACAGCUGGCUCUUCUGAGCAUUUAGGAG	521	69	4365	55	15	21	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:304345-304926	Cluster_6326	Pocillopora_meandrina_HIv1___Sc0000034	304345	304926	582	457	184	0.019693654266958426	-	UGUAAAGACGUUUUGAGGCUUUGGAGACA	39	2	435	3	3	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:306994-307423	Cluster_6327	Pocillopora_meandrina_HIv1___Sc0000034	306994	307423	430	332	109	0.0	-	UGAUCAACCAGUAUCGAACAGGAUUUAAGU	88	2	321	0	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:309422-309848	Cluster_6328	Pocillopora_meandrina_HIv1___Sc0000034	309422	309848	427	326	146	0.003067484662576687	-	UGUUCUGUGUUCGUUCUCUGUGAAGGC	34	3	312	2	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:309881-311240	Cluster_6329	Pocillopora_meandrina_HIv1___Sc0000034	309881	311240	1360	2601	652	0.0	-	UGUGAGACAUUGUGAAUCUUCUGACAGCUGC	175	20	2541	7	9	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:311570-311999	Cluster_6330	Pocillopora_meandrina_HIv1___Sc0000034	311570	311999	430	521	130	0.03262955854126679	-	UUCAUUGUGAGGAGAUGAUUCGGUGUUA	86	14	492	4	6	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:377601-378031	Cluster_6331	Pocillopora_meandrina_HIv1___Sc0000034	377601	378031	431	1052	146	0.9477186311787072	+	UGAGACAGUACACACGAUUUGAUAUA	249	4	1027	2	0	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:408804-409230	Cluster_6332	Pocillopora_meandrina_HIv1___Sc0000034	408804	409230	427	147	58	0.30612244897959184	.	UGUGUGCAGUUUUCUCUAAUCUUGUUU	18	0	130	0	0	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:443822-444250	Cluster_6333	Pocillopora_meandrina_HIv1___Sc0000034	443822	444250	429	192	40	1.0	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	87	0	178	0	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:564007-564436	Cluster_6334	Pocillopora_meandrina_HIv1___Sc0000034	564007	564436	430	3420	178	0.0	-	UGGAACAUGGUAGGAGAGUGCAUGCAUG	1068	43	3291	8	20	19	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:674187-674705	Cluster_6335	Pocillopora_meandrina_HIv1___Sc0000034	674187	674705	519	254	108	0.9921259842519685	+	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	53	2	248	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:832826-833649	Cluster_6336	Pocillopora_meandrina_HIv1___Sc0000034	832826	833649	824	2028	102	0.004437869822485207	-	UUGGACUGUGCAUAACCAUUUGU	1117	36	743	0	39	1150	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:864097-864526	Cluster_6337	Pocillopora_meandrina_HIv1___Sc0000034	864097	864526	430	99	26	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	30	0	96	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:909162-909585	Cluster_6338	Pocillopora_meandrina_HIv1___Sc0000034	909162	909585	424	112	30	0.8928571428571429	+	AGCAUGACGAAGGUUAGAGAUCGAC	39	4	71	0	1	2	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1411820-1412249	Cluster_6339	Pocillopora_meandrina_HIv1___Sc0000034	1411820	1412249	430	75	12	0.0	-	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	53	0	75	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1425587-1426014	Cluster_6340	Pocillopora_meandrina_HIv1___Sc0000034	1425587	1426014	428	142	59	0.9225352112676056	+	UUAAACCGACUCACAGUCCGAUUCGAAU	32	0	136	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1690392-1690810	Cluster_6341	Pocillopora_meandrina_HIv1___Sc0000034	1690392	1690810	419	295	9	0.010169491525423728	-	UAUUAAUGCUGUAGGUGAU	201	293	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1758627-1759046	Cluster_6342	Pocillopora_meandrina_HIv1___Sc0000034	1758627	1759046	420	79	29	1.0	+	GAUUGGCUAGUUGGACACAUAUGUAG	12	15	33	14	10	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2059786-2060212	Cluster_6343	Pocillopora_meandrina_HIv1___Sc0000034	2059786	2060212	427	222	131	0.8603603603603603	+	UGAGUCGAGGUUAUUCACAAUACGAGC	23	3	193	3	1	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2060450-2061107	Cluster_6344	Pocillopora_meandrina_HIv1___Sc0000034	2060450	2061107	658	1203	366	0.8827930174563591	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	103	14	1123	7	5	26	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2061327-2061780	Cluster_6345	Pocillopora_meandrina_HIv1___Sc0000034	2061327	2061780	454	464	233	0.5560344827586207	.	AUAAGAGAUAUAAACUUCUGAAAGCCUGUG	30	3	437	3	3	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2061902-2062557	Cluster_6346	Pocillopora_meandrina_HIv1___Sc0000034	2061902	2062557	656	611	282	0.8036006546644845	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	110	6	547	10	4	15	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2161700-2162206	Cluster_6347	Pocillopora_meandrina_HIv1___Sc0000034	2161700	2162206	507	423	166	0.735224586288416	.	UAAGACGCACUCUACUCUGUUGUCAAUAC	42	18	357	9	6	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2221418-2221854	Cluster_6348	Pocillopora_meandrina_HIv1___Sc0000034	2221418	2221854	437	1694	327	1.0	+	GUCUCCCCUUGUCAGAGUGUAUGAAGU	211	130	1306	45	33	96	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2262728-2263202	Cluster_6349	Pocillopora_meandrina_HIv1___Sc0000034	2262728	2263202	475	271	116	0.01107011070110701	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	48	91	133	14	9	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2440726-2441146	Cluster_6350	Pocillopora_meandrina_HIv1___Sc0000034	2440726	2441146	421	121	49	0.5785123966942148	.	CCAAUACCGAAACAACAUAGAUGAACUAACA	15	2	111	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2581784-2582380	Cluster_6351	Pocillopora_meandrina_HIv1___Sc0000034	2581784	2582380	597	5581	487	0.9971331302633937	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	841	11	5517	4	7	8	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2626176-2626794	Cluster_6352	Pocillopora_meandrina_HIv1___Sc0000034	2626176	2626794	619	957	207	0.9602925809822361	+	UUGUGUGUUUGGCUGGAGCAUCUGCGGC	139	22	880	10	6	15	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2727977-2728403	Cluster_6353	Pocillopora_meandrina_HIv1___Sc0000034	2727977	2728403	427	80	28	0.95	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	0	78	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2746578-2747174	Cluster_6354	Pocillopora_meandrina_HIv1___Sc0000034	2746578	2747174	597	5745	489	0.9980852915578764	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	849	15	5681	1	7	16	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2812994-2813594	Cluster_6355	Pocillopora_meandrina_HIv1___Sc0000034	2812994	2813594	601	2815	283	0.9822380106571936	+	UAUCAUGGUCUAAAAUUGGUGCUUCAGUU	870	5	2773	0	5	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2821751-2822178	Cluster_6356	Pocillopora_meandrina_HIv1___Sc0000034	2821751	2822178	428	246	97	0.0040650406504065045	-	UGAGUGUCUUGAAAGUUCUGUCUGGUC	39	4	239	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2824948-2825376	Cluster_6357	Pocillopora_meandrina_HIv1___Sc0000034	2824948	2825376	429	71	11	1.0	+	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	33	0	69	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2830459-2830887	Cluster_6358	Pocillopora_meandrina_HIv1___Sc0000034	2830459	2830887	429	156	20	0.0	-	UGUUAACCAGUGUUUAGUUGGCAGUGUGG	65	1	154	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2836051-2836477	Cluster_6359	Pocillopora_meandrina_HIv1___Sc0000034	2836051	2836477	427	169	81	0.17159763313609466	-	UCUAUCGGGAAAUCUCAAUGCAUGGAGC	20	2	152	1	1	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2850194-2850828	Cluster_6360	Pocillopora_meandrina_HIv1___Sc0000034	2850194	2850828	635	652	304	0.9432515337423313	+	UAAUCAUUACAAAACUCUCUGACUCUGG	34	16	613	2	3	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2851262-2853851	Cluster_6361	Pocillopora_meandrina_HIv1___Sc0000034	2851262	2853851	2590	8479	1978	0.8702677202500295	+	UGAAUAAACGAGCCAAGGGAAAUCCUGA	393	60	7847	43	56	112	361	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2867825-2868716	Cluster_6362	Pocillopora_meandrina_HIv1___Sc0000034	2867825	2868716	892	307	120	0.6482084690553745	.	UACGUAAUCUAACCCUUGCAAUGACUUGC	42	7	228	0	3	35	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2904544-2905250	Cluster_6363	Pocillopora_meandrina_HIv1___Sc0000034	2904544	2905250	707	429	111	0.993006993006993	+	UAGGACAACUGAGAAUCCACGUAGACUC	112	0	421	0	5	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2907200-2907622	Cluster_6364	Pocillopora_meandrina_HIv1___Sc0000034	2907200	2907622	423	110	63	0.9	+	UGCUUGAAUUCUGCCGAACUGUACUGC	20	1	100	1	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2908286-2909080	Cluster_6365	Pocillopora_meandrina_HIv1___Sc0000034	2908286	2909080	795	2299	573	0.9230100043497173	+	UCCGUAUAUGAAUGUAUCGUCUGCAAU	263	20	2177	19	4	37	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2910217-2910646	Cluster_6366	Pocillopora_meandrina_HIv1___Sc0000034	2910217	2910646	430	233	123	0.8497854077253219	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	37	2	210	3	1	2	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2937155-2937903	Cluster_6367	Pocillopora_meandrina_HIv1___Sc0000034	2937155	2937903	749	896	373	0.025669642857142856	-	UAAGUAAGUAGACAUGGAUAGGCCUUGA	46	7	861	5	2	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2946021-2946448	Cluster_6368	Pocillopora_meandrina_HIv1___Sc0000034	2946021	2946448	428	99	17	0.9696969696969697	+	UAACCCGAGAACUGACACGUGAGUAGUC	60	0	87	0	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2950488-2950915	Cluster_6369	Pocillopora_meandrina_HIv1___Sc0000034	2950488	2950915	428	100	21	0.96	+	UAACCCGAGAACUGACACGUGAGUAGUC	60	0	90	0	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2954955-2955382	Cluster_6370	Pocillopora_meandrina_HIv1___Sc0000034	2954955	2955382	428	112	17	0.9732142857142857	+	UAACCCGAGAACUGACACGUGAGUAGUC	70	2	98	1	1	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2959422-2959849	Cluster_6371	Pocillopora_meandrina_HIv1___Sc0000034	2959422	2959849	428	105	18	0.9809523809523809	+	UAACCCGAGAACUGACACGUGAGUAGUC	73	0	97	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2963889-2964316	Cluster_6372	Pocillopora_meandrina_HIv1___Sc0000034	2963889	2964316	428	112	17	0.9732142857142857	+	UAACCCGAGAACUGACACGUGAGUAGUC	71	0	97	2	0	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2976051-2976606	Cluster_6373	Pocillopora_meandrina_HIv1___Sc0000034	2976051	2976606	556	3459	470	0.9875686614628505	+	UGUACGUGCUCGUGAUCUCGUAAUGCUGAC	429	13	3389	8	6	13	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2982314-2982753	Cluster_6374	Pocillopora_meandrina_HIv1___Sc0000034	2982314	2982753	440	244	120	0.7172131147540983	.	UACGCUUAAACUUUUCCUUGAUCAAUUUG	20	10	202	2	7	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3000361-3000809	Cluster_6375	Pocillopora_meandrina_HIv1___Sc0000034	3000361	3000809	449	394	72	0.5152284263959391	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	110	3	389	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3068438-3068862	Cluster_6376	Pocillopora_meandrina_HIv1___Sc0000034	3068438	3068862	425	106	47	0.8584905660377359	+	UAACAUCGAACUGGACCUAAAUUUAAG	13	17	77	8	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3069260-3069686	Cluster_6377	Pocillopora_meandrina_HIv1___Sc0000034	3069260	3069686	427	152	57	0.9868421052631579	+	UUGACCGGGUGGAAAUAAGAGAGACAGC	18	6	125	1	0	2	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:64573-65016	Cluster_6378	Pocillopora_meandrina_HIv1___Sc0000035	64573	65016	444	454	111	0.23127753303964757	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	180	1	432	1	1	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:67982-68407	Cluster_6379	Pocillopora_meandrina_HIv1___Sc0000035	67982	68407	426	132	46	0.25	.	UCGAAGAUACAAACAUAUGAACCAGCA	24	0	127	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:148078-148501	Cluster_6380	Pocillopora_meandrina_HIv1___Sc0000035	148078	148501	424	90	34	0.9222222222222223	+	UACGUGUAGACUGAGCCAUUGCCUAGU	22	0	77	1	0	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:148904-150032	Cluster_6381	Pocillopora_meandrina_HIv1___Sc0000035	148904	150032	1129	1202	406	0.8286189683860233	+	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	94	12	1119	2	4	23	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:214892-215320	Cluster_6382	Pocillopora_meandrina_HIv1___Sc0000035	214892	215320	429	154	37	0.9935064935064936	+	AUUGCAAGCAAACGGCUCGGAGUCUUCUU	38	1	146	2	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:218978-219411	Cluster_6383	Pocillopora_meandrina_HIv1___Sc0000035	218978	219411	434	1008	154	0.998015873015873	+	AUUGCAAACAAACGGCUACGAGUCUUCUUC	220	10	825	11	8	5	149	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:220024-220453	Cluster_6384	Pocillopora_meandrina_HIv1___Sc0000035	220024	220453	430	204	58	1.0	+	AUUGUAAGCCUUCUUCGUGCAAACCUGA	52	11	181	2	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:271304-271756	Cluster_6385	Pocillopora_meandrina_HIv1___Sc0000035	271304	271756	453	242	95	0.9752066115702479	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	35	2	234	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:271912-272396	Cluster_6386	Pocillopora_meandrina_HIv1___Sc0000035	271912	272396	485	334	179	0.8592814371257484	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	30	0	297	2	1	14	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:272572-275080	Cluster_6387	Pocillopora_meandrina_HIv1___Sc0000035	272572	275080	2509	4346	1424	0.9302807179015187	+	UGUACAACCAUCCGAUACUCUUGU	676	34	3093	17	19	77	1106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:275279-276534	Cluster_6388	Pocillopora_meandrina_HIv1___Sc0000035	275279	276534	1256	1465	668	0.8784982935153584	+	UUGGAUACAUGAUCAGAUUCGUAACA	37	50	1303	8	22	25	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:277449-278556	Cluster_6389	Pocillopora_meandrina_HIv1___Sc0000035	277449	278556	1108	1315	551	0.8714828897338402	+	UACAAUAACCUCUGAUUUCACUAAAUG	63	15	1200	3	11	24	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:282145-282573	Cluster_6390	Pocillopora_meandrina_HIv1___Sc0000035	282145	282573	429	301	50	0.9966777408637874	+	AUUGCAAGCGAACGGCUAGGAGUCUUCUU	112	7	284	1	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:307392-307927	Cluster_6391	Pocillopora_meandrina_HIv1___Sc0000035	307392	307927	536	187	73	0.8823529411764706	+	UGCAUGUGCUUUGUCUUGGAUUUCAU	20	2	176	1	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:307942-308348	Cluster_6392	Pocillopora_meandrina_HIv1___Sc0000035	307942	308348	407	88	38	0.7613636363636364	.	UGUUACAAAACCAUUAGAACUAUCAGUU	16	2	70	1	3	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:309347-309764	Cluster_6393	Pocillopora_meandrina_HIv1___Sc0000035	309347	309764	418	118	55	0.288135593220339	.	UAUGCAUUCAAUGAUCGUGGUCGG	26	1	62	1	2	8	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:309810-310471	Cluster_6394	Pocillopora_meandrina_HIv1___Sc0000035	309810	310471	662	286	143	0.5944055944055944	.	UAUGCAUUCAAUGAUCGUGGUCGG	23	4	217	2	4	12	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:412063-412557	Cluster_6395	Pocillopora_meandrina_HIv1___Sc0000035	412063	412557	495	879	254	0.12514220705346984	-	AAUGGGAAAACGAGAACAGCGUGA	59	17	609	17	9	82	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:578022-578473	Cluster_6396	Pocillopora_meandrina_HIv1___Sc0000035	578022	578473	452	202	73	0.9900990099009901	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	27	1	198	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:578632-579059	Cluster_6397	Pocillopora_meandrina_HIv1___Sc0000035	578632	579059	428	305	173	0.8491803278688524	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	28	0	276	1	1	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:579393-581800	Cluster_6398	Pocillopora_meandrina_HIv1___Sc0000035	579393	581800	2408	4307	1358	0.9185047596935222	+	UGUACAACCAUCCGAUACUCUUGU	701	22	3002	17	31	81	1154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:581999-583254	Cluster_6399	Pocillopora_meandrina_HIv1___Sc0000035	581999	583254	1256	1494	687	0.8882195448460509	+	UGAUCAGAUUCGUAACAGGCAAAGCAUA	56	50	1337	11	16	24	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:583270-583704	Cluster_6400	Pocillopora_meandrina_HIv1___Sc0000035	583270	583704	435	373	183	0.5040214477211796	.	UGCAAUGGUCUGCAGGUUCGUAGGAUG	20	16	313	5	5	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:584166-585285	Cluster_6401	Pocillopora_meandrina_HIv1___Sc0000035	584166	585285	1120	3889	873	0.8840318848032913	+	UGCUAACACGGGACGAUUUGGAUGAAGCC	402	20	3629	13	49	52	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:593477-593906	Cluster_6402	Pocillopora_meandrina_HIv1___Sc0000035	593477	593906	430	1805	57	1.0	+	AUUGCAAGCAAACGGCUAGGAGUCUUCUU	1261	0	1803	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:667118-667546	Cluster_6403	Pocillopora_meandrina_HIv1___Sc0000035	667118	667546	429	161	58	1.0	+	UAAGUUGAUCUCGGUUGUCGAAAGGCAGUA	23	0	161	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:672252-672704	Cluster_6404	Pocillopora_meandrina_HIv1___Sc0000035	672252	672704	453	244	89	0.020491803278688523	-	UGAACACGCGUACUUGUAAUUAUGAAAUG	55	2	237	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:676378-676800	Cluster_6405	Pocillopora_meandrina_HIv1___Sc0000035	676378	676800	423	129	67	0.8449612403100775	+	UAAGACGCACUCUACUCUGUUGUCAAUAC	21	7	112	3	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:677759-678185	Cluster_6406	Pocillopora_meandrina_HIv1___Sc0000035	677759	678185	427	196	86	0.2193877551020408	.	UGUACUGUUUGUAUUUUUUUUCCUGGG	35	3	176	4	4	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:757961-758385	Cluster_6407	Pocillopora_meandrina_HIv1___Sc0000035	757961	758385	425	116	26	0.0	-	UACUGGUGCGAUGCAACUCUCGAUA	56	0	93	15	8	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:763025-763446	Cluster_6408	Pocillopora_meandrina_HIv1___Sc0000035	763025	763446	422	135	52	1.0	+	UUCGAGCGUAAGCCCUUCUCCA	20	4	10	18	43	40	20	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:954470-955072	Cluster_6409	Pocillopora_meandrina_HIv1___Sc0000035	954470	955072	603	726	188	0.04132231404958678	-	UCUGUAAACUCCGUAUUUAAUAACAAUUAA	88	9	691	5	1	0	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:964606-965035	Cluster_6410	Pocillopora_meandrina_HIv1___Sc0000035	964606	965035	430	168	33	1.0	+	UACUCUUCAAAAAAAUCUCUGGAACCAAGA	79	0	168	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:981170-981716	Cluster_6411	Pocillopora_meandrina_HIv1___Sc0000035	981170	981716	547	2595	143	0.9645472061657033	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	706	4	2583	1	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1000950-1001370	Cluster_6412	Pocillopora_meandrina_HIv1___Sc0000035	1000950	1001370	421	1517	27	0.998681608437706	+	CGGCCUGAAAAAAAAAAA	884	1424	0	50	26	17	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1080556-1080981	Cluster_6413	Pocillopora_meandrina_HIv1___Sc0000035	1080556	1080981	426	108	35	0.027777777777777776	-	UAAUCGUUGGCUCUUUCUCGAGACGUG	25	2	104	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1143856-1144329	Cluster_6414	Pocillopora_meandrina_HIv1___Sc0000035	1143856	1144329	474	1364	224	1.0	+	AUGAAUGAUGAAUGUGAAU	240	631	598	46	19	35	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1144745-1145576	Cluster_6415	Pocillopora_meandrina_HIv1___Sc0000035	1144745	1145576	832	4559	540	1.0	+	GAUUACAAAAUAUACCGGAAGUCUGAUA	894	447	2580	350	335	414	433	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1146812-1147303	Cluster_6416	Pocillopora_meandrina_HIv1___Sc0000035	1146812	1147303	492	654	189	0.9969418960244648	+	UGUGUCUUGGCUUUGAUUGGUGCCGUCA	193	132	368	70	32	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1472151-1473315	Cluster_6417	Pocillopora_meandrina_HIv1___Sc0000035	1472151	1473315	1165	984	437	0.32621951219512196	.	UCUUCUCCAAAGACGUCUGAAUAUUCACUC	49	5	891	8	7	20	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1473587-1474099	Cluster_6418	Pocillopora_meandrina_HIv1___Sc0000035	1473587	1474099	513	723	273	0.06915629322268327	-	UAAACGUACUGGUGGUUGUGUUCUAAACC	41	5	685	6	7	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1474132-1474899	Cluster_6419	Pocillopora_meandrina_HIv1___Sc0000035	1474132	1474899	768	386	192	0.13212435233160622	-	UAGGUAUACCGUGAUUGGAGAAAUGGCGU	21	13	342	4	5	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1475095-1475522	Cluster_6420	Pocillopora_meandrina_HIv1___Sc0000035	1475095	1475522	428	307	143	0.048859934853420196	-	UGUUGAUGUAACCGUGAUCUUUGAAGG	18	2	281	5	1	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1581037-1581465	Cluster_6421	Pocillopora_meandrina_HIv1___Sc0000035	1581037	1581465	429	201	65	0.2736318407960199	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	39	1	166	1	2	2	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1582204-1582625	Cluster_6422	Pocillopora_meandrina_HIv1___Sc0000035	1582204	1582625	422	232	109	0.08189655172413793	-	UCUACGUCUAUCAACCAGGAAUGAAACUCGU	18	3	212	1	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1582977-1583395	Cluster_6423	Pocillopora_meandrina_HIv1___Sc0000035	1582977	1583395	419	255	170	0.08235294117647059	-	UCAGACACGUGGAUACUUGCGAUGAAGU	12	4	235	1	3	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1583481-1583909	Cluster_6424	Pocillopora_meandrina_HIv1___Sc0000035	1583481	1583909	429	211	139	0.1895734597156398	-	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	17	0	188	4	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1989820-1989912	Cluster_6425	Pocillopora_meandrina_HIv1___Sc0000035	1989820	1989912	93	4597	200	1.0	+	UAUUUACAACUCUCAAAACAAC	1730	611	48	386	2012	1503	37	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000035:2501614-2502039	Cluster_6426	Pocillopora_meandrina_HIv1___Sc0000035	2501614	2502039	426	100	32	0.0	-	CUUCGUAGAAAUUACCGGACUGUAACAGG	21	5	77	3	12	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2674926-2675334	Cluster_6427	Pocillopora_meandrina_HIv1___Sc0000035	2674926	2675334	409	157	86	0.4267515923566879	.	ACUGGAUACAAAACUGCUCGAUGC	17	0	115	2	5	5	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2675412-2676156	Cluster_6428	Pocillopora_meandrina_HIv1___Sc0000035	2675412	2676156	745	347	159	0.05475504322766571	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	58	1	333	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2743900-2744864	Cluster_6429	Pocillopora_meandrina_HIv1___Sc0000035	2743900	2744864	965	2299	657	0.40365376250543716	.	UGUACCUUUGUCGAUUCUGAUCAUCGCA	133	22	2151	10	27	38	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2746976-2747526	Cluster_6430	Pocillopora_meandrina_HIv1___Sc0000035	2746976	2747526	551	640	190	0.928125	+	UCCUUGUAUACUUUUGGGCCUUUCCAGA	70	4	621	1	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:84755-86650	Cluster_6431	Pocillopora_meandrina_HIv1___Sc0000036	84755	86650	1896	10816	2260	0.9639423076923077	+	CAGGUCUACUGCUUUACUUCUGAGAGUAA	765	87	10115	36	159	170	249	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:86681-87721	Cluster_6432	Pocillopora_meandrina_HIv1___Sc0000036	86681	87721	1041	2292	683	0.9594240837696335	+	UGCUUUAACUUUCUUUGGAUCAGGUCUAA	124	20	2170	13	30	23	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:87873-89407	Cluster_6433	Pocillopora_meandrina_HIv1___Sc0000036	87873	89407	1535	9386	2115	0.875026635414447	+	UCUACGUCUUUCGCUUGUUUUUCACUGAGU	270	42	8812	33	46	181	272	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:189032-189433	Cluster_6434	Pocillopora_meandrina_HIv1___Sc0000036	189032	189433	402	194	99	0.09278350515463918	-	UAAGAUUCCAAGAUAUUUAAAACAAGU	24	1	173	0	6	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:201228-201640	Cluster_6435	Pocillopora_meandrina_HIv1___Sc0000036	201228	201640	413	185	140	0.8756756756756757	+	UAACAGCUUAAGACGCGAACGAG	13	41	55	25	17	28	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:651439-651920	Cluster_6436	Pocillopora_meandrina_HIv1___Sc0000036	651439	651920	482	591	232	0.10490693739424704	-	UAAUCUGAAGGUCGUGAGU	63	366	65	98	22	33	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:714464-714879	Cluster_6437	Pocillopora_meandrina_HIv1___Sc0000036	714464	714879	416	202	133	0.9158415841584159	+	UAAAUGACUCAGUCUACUAAAAUAGAACUA	10	43	123	7	6	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1027025-1027429	Cluster_6438	Pocillopora_meandrina_HIv1___Sc0000036	1027025	1027429	405	177	124	0.0	-	GACGGGUUUUUAUGACGAACU	12	32	81	30	13	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1284759-1285299	Cluster_6439	Pocillopora_meandrina_HIv1___Sc0000036	1284759	1285299	541	1184	419	0.9974662162162162	+	CUGCACACUUUUUAAGACCUGUC	102	232	402	104	196	182	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1286770-1287192	Cluster_6440	Pocillopora_meandrina_HIv1___Sc0000036	1286770	1287192	423	155	77	0.9935483870967742	+	UAGCACGCUGUUUCAACCAUGAAAGAACA	31	22	98	5	7	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1292308-1292851	Cluster_6441	Pocillopora_meandrina_HIv1___Sc0000036	1292308	1292851	544	1784	427	1.0	+	GUUUGACGACAAUAGACCUUGGUACACAA	285	224	1129	65	116	132	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1346400-1346823	Cluster_6442	Pocillopora_meandrina_HIv1___Sc0000036	1346400	1346823	424	150	63	1.0	+	AAGGCCAGAAAAUCUGAAGAGACU	18	29	47	11	12	14	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1389110-1389539	Cluster_6443	Pocillopora_meandrina_HIv1___Sc0000036	1389110	1389539	430	529	77	0.0	-	UCUGGAAGCGUUAUCUGCUGGUCUGCC	141	0	515	2	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1437981-1438412	Cluster_6444	Pocillopora_meandrina_HIv1___Sc0000036	1437981	1438412	432	780	178	0.001282051282051282	-	UCUGGAAGCGUUAUCUGCCGGUCUGCCUG	161	61	688	7	7	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1504251-1504679	Cluster_6445	Pocillopora_meandrina_HIv1___Sc0000036	1504251	1504679	429	148	38	0.0	-	UCUGGAAGCAUUAUCUGCCGGUCUGCCUG	49	2	143	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1527809-1528277	Cluster_6446	Pocillopora_meandrina_HIv1___Sc0000036	1527809	1528277	469	1224	296	0.0016339869281045752	-	UGUGACUGAAAAGAUCUUGAAGGAACAUA	166	12	982	18	13	49	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1532703-1533139	Cluster_6447	Pocillopora_meandrina_HIv1___Sc0000036	1532703	1533139	437	284	110	0.0035211267605633804	-	UCUGAAAGCAUUAUCUGCCGGUCUGCCUG	35	13	250	6	6	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1557087-1557516	Cluster_6448	Pocillopora_meandrina_HIv1___Sc0000036	1557087	1557516	430	318	126	0.0	-	CGUUAUCUGCUGGUCUGCCUGUACUUGUC	82	36	254	7	7	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1572102-1572553	Cluster_6449	Pocillopora_meandrina_HIv1___Sc0000036	1572102	1572553	452	479	77	0.0	-	UCUCGAAGCAUUGUCUGCUGGUCUGCCUG	76	3	474	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1597170-1597606	Cluster_6450	Pocillopora_meandrina_HIv1___Sc0000036	1597170	1597606	437	1288	253	0.0	-	UCUUGAAGCAUUAUCUGCUGGUCUGCCUG	306	243	984	24	13	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1601496-1601928	Cluster_6451	Pocillopora_meandrina_HIv1___Sc0000036	1601496	1601928	433	1078	126	0.9981447124304267	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	640	3	1067	1	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1615578-1616029	Cluster_6452	Pocillopora_meandrina_HIv1___Sc0000036	1615578	1616029	452	434	84	0.0	-	UCUCGAAGCAUUGUCUGCUGGUCUGCCUG	73	6	419	1	5	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1686687-1687189	Cluster_6453	Pocillopora_meandrina_HIv1___Sc0000036	1686687	1687189	503	420	146	0.7523809523809524	.	UCUGGCCACAAAUCGUGCAUUCUUGUUC	69	11	352	3	13	29	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2265598-2266027	Cluster_6454	Pocillopora_meandrina_HIv1___Sc0000036	2265598	2266027	430	162	51	0.9938271604938271	+	UGAAUAGCAUAACUGAUGAACUACGUG	22	0	160	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2266549-2267225	Cluster_6455	Pocillopora_meandrina_HIv1___Sc0000036	2266549	2267225	677	986	378	0.7221095334685599	.	UGACUUUCGCUAUCUUCCAACAAUCAGGGA	42	12	869	22	7	22	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2281183-2281602	Cluster_6456	Pocillopora_meandrina_HIv1___Sc0000036	2281183	2281602	420	180	87	0.10555555555555556	-	CGUGUUUACAUGGCCUGAUG	31	79	12	32	46	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2400213-2400686	Cluster_6457	Pocillopora_meandrina_HIv1___Sc0000036	2400213	2400686	474	256366	704	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUCGCC	68051	382	255393	12	25	42	512	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2716860-2717282	Cluster_6458	Pocillopora_meandrina_HIv1___Sc0000036	2716860	2717282	423	171	37	0.9415204678362573	+	UUCGCGUCUGAAGCUGUUAGAGU	83	10	11	5	23	120	2	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2755154-2755583	Cluster_6459	Pocillopora_meandrina_HIv1___Sc0000036	2755154	2755583	430	194	30	1.0	+	UAAGACUGCAAAUGAAAAACGUCAAAUGGC	113	5	187	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2927793-2928327	Cluster_6460	Pocillopora_meandrina_HIv1___Sc0000036	2927793	2928327	535	3156	428	1.0	+	AUAAUUAACAGUUGGCAGAUAUUG	676	215	800	73	225	792	1051	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2960173-2960605	Cluster_6461	Pocillopora_meandrina_HIv1___Sc0000036	2960173	2960605	433	310	126	0.932258064516129	+	UACGUGUAGAAAGCCUUCUCUGACAUC	31	4	287	2	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2960936-2961336	Cluster_6462	Pocillopora_meandrina_HIv1___Sc0000036	2960936	2961336	401	168	83	0.9821428571428571	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	16	0	162	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2961678-2962468	Cluster_6463	Pocillopora_meandrina_HIv1___Sc0000036	2961678	2962468	791	4056	995	0.9282544378698225	+	UAACUUCCCAUUCCUGAACAGAUUCGUG	309	107	3736	22	37	54	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:4441-4869	Cluster_6464	Pocillopora_meandrina_HIv1___Sc0000037	4441	4869	429	372	34	0.013440860215053764	-	UUUUUCCUGUGAACUGAUAUCAACUUAG	229	1	368	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:6786-7213	Cluster_6465	Pocillopora_meandrina_HIv1___Sc0000037	6786	7213	428	160	47	0.8875	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	53	5	153	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:13248-13672	Cluster_6466	Pocillopora_meandrina_HIv1___Sc0000037	13248	13672	425	85	36	0.9411764705882353	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	40	0	79	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:177212-177641	Cluster_6467	Pocillopora_meandrina_HIv1___Sc0000037	177212	177641	430	269	47	0.0	-	UGUGCUAGUCAAUGGGAACGUAAAUUUGAU	154	6	255	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:373185-373611	Cluster_6468	Pocillopora_meandrina_HIv1___Sc0000037	373185	373611	427	185	39	0.13513513513513514	-	UUGGUGCAUUUCGAUCCUUGCUGUUCA	44	1	181	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:657487-657913	Cluster_6469	Pocillopora_meandrina_HIv1___Sc0000037	657487	657913	427	163	67	0.1165644171779141	-	UGCUUUAACGAACUGAUGUGUUUCUUGA	44	1	158	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:695148-695559	Cluster_6470	Pocillopora_meandrina_HIv1___Sc0000037	695148	695559	412	170	141	0.0058823529411764705	-	CUCGAUGGAAAUUCUUAAUGGC	3	33	75	15	19	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:705632-706037	Cluster_6471	Pocillopora_meandrina_HIv1___Sc0000037	705632	706037	406	140	115	0.007142857142857143	-	CUAGUAACUGAUGCUCGACUUCUUUGAAUUU	4	38	74	7	7	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1082539-1083487	Cluster_6472	Pocillopora_meandrina_HIv1___Sc0000037	1082539	1083487	949	2260	724	0.09646017699115045	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	190	12	2125	9	12	33	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1083489-1084357	Cluster_6473	Pocillopora_meandrina_HIv1___Sc0000037	1083489	1084357	869	593	269	0.0657672849915683	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	37	7	557	3	3	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1084558-1086553	Cluster_6474	Pocillopora_meandrina_HIv1___Sc0000037	1084558	1086553	1996	3504	1179	0.06649543378995434	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	193	34	3210	16	31	83	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1090517-1090944	Cluster_6475	Pocillopora_meandrina_HIv1___Sc0000037	1090517	1090944	428	519	40	0.9980732177263969	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	269	1	516	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1092825-1093253	Cluster_6476	Pocillopora_meandrina_HIv1___Sc0000037	1092825	1093253	429	119	47	0.9831932773109243	+	AGUUGACAUAUGGACCGGUACAAACAAGGG	25	1	111	1	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1230340-1231032	Cluster_6477	Pocillopora_meandrina_HIv1___Sc0000037	1230340	1231032	693	676	194	1.0	+	UGAGAACUUCUGGUCGUGUUAAACUAAUA	112	3	660	1	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1231089-1231516	Cluster_6478	Pocillopora_meandrina_HIv1___Sc0000037	1231089	1231516	428	241	90	1.0	+	UUGGUCUUUAUCUUUUCAGGGUCUGGAA	38	5	229	0	5	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1306233-1306654	Cluster_6479	Pocillopora_meandrina_HIv1___Sc0000037	1306233	1306654	422	126	76	0.9444444444444444	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	11	0	120	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1307746-1308170	Cluster_6480	Pocillopora_meandrina_HIv1___Sc0000037	1307746	1308170	425	130	76	0.8615384615384616	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	12	1	114	0	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1309506-1309918	Cluster_6481	Pocillopora_meandrina_HIv1___Sc0000037	1309506	1309918	413	150	93	0.8733333333333333	+	UGCUUGUGACUUAAGUUGUCGUUCUUCU	11	3	138	0	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1803344-1803763	Cluster_6482	Pocillopora_meandrina_HIv1___Sc0000037	1803344	1803763	420	1721	71	0.9959325973271353	+	UGUCUGUCUGAGUGUCUAC	547	1712	1	8	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1935822-1936396	Cluster_6483	Pocillopora_meandrina_HIv1___Sc0000037	1935822	1936396	575	439	158	0.9271070615034168	+	UAAGAUUUACACACUGAUCGACCAUGU	146	4	407	0	5	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1936420-1937055	Cluster_6484	Pocillopora_meandrina_HIv1___Sc0000037	1936420	1937055	636	548	238	0.718978102189781	.	AAGUUUGUGAGCCCUGACAAUCCGGAAGA	34	8	467	2	9	10	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1937377-1938367	Cluster_6485	Pocillopora_meandrina_HIv1___Sc0000037	1937377	1938367	991	3720	625	0.967741935483871	+	UCGGAUGUACUCUUCUGCCCCAUGUGGAUG	477	25	3539	25	22	41	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1938809-1939211	Cluster_6486	Pocillopora_meandrina_HIv1___Sc0000037	1938809	1939211	403	252	144	0.6587301587301587	.	CCCAAUACCAACUGUAGAUGAACUGCUAC	12	1	211	0	3	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1939231-1940796	Cluster_6487	Pocillopora_meandrina_HIv1___Sc0000037	1939231	1940796	1566	1799	704	0.9633129516397999	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	101	16	1725	1	5	24	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2093152-2093575	Cluster_6488	Pocillopora_meandrina_HIv1___Sc0000037	2093152	2093575	424	118	20	0.9915254237288136	+	UGACGUUCAAACUUUUCUAGAAGGGAAA	25	25	67	14	4	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2142047-2142474	Cluster_6489	Pocillopora_meandrina_HIv1___Sc0000037	2142047	2142474	428	104	43	0.0673076923076923	-	UAUUUGCACUAUUGUGGAAAAUUCCUGU	16	5	93	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2252197-2254838	Cluster_6490	Pocillopora_meandrina_HIv1___Sc0000037	2252197	2254838	2642	9652	1915	0.9933692498963945	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1307	36	9439	16	27	35	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2270053-2270481	Cluster_6491	Pocillopora_meandrina_HIv1___Sc0000037	2270053	2270481	429	175	30	1.0	+	UGUAAAUCUUGUCUGGAUCUGGGUCAACA	78	3	170	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2277242-2277671	Cluster_6492	Pocillopora_meandrina_HIv1___Sc0000037	2277242	2277671	430	232	113	0.8793103448275862	+	UCAGUGACUUUUGAGACUAUUGGUAAUAAU	18	1	223	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2277916-2278420	Cluster_6493	Pocillopora_meandrina_HIv1___Sc0000037	2277916	2278420	505	417	137	0.9592326139088729	+	UAGUUGACGAAUUUCUGGUGUUAUAAACGG	41	1	406	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2280209-2281530	Cluster_6494	Pocillopora_meandrina_HIv1___Sc0000037	2280209	2281530	1322	2099	593	0.9075750357313006	+	UCUUCCAUUUUAUGACUCAAAGCCUCUGGGA	64	17	1915	8	38	37	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2281809-2282636	Cluster_6495	Pocillopora_meandrina_HIv1___Sc0000037	2281809	2282636	828	724	244	0.8328729281767956	+	UGUGUGACUUAAGCUUCUAGCUGCAAACAGC	88	2	670	5	8	6	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2282728-2283298	Cluster_6496	Pocillopora_meandrina_HIv1___Sc0000037	2282728	2283298	571	1253	362	0.8276137270550679	+	UCAAACCUCUCUUGGAUGAAUUUCAUGG	86	7	1145	18	32	16	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2342605-2343031	Cluster_6497	Pocillopora_meandrina_HIv1___Sc0000037	2342605	2343031	427	168	80	0.02976190476190476	-	UGUUUCGCUUAGAAUUGUUGCAGUUGGC	16	5	159	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2417449-2417876	Cluster_6498	Pocillopora_meandrina_HIv1___Sc0000037	2417449	2417876	428	119	30	1.0	+	AAUCUAACCAACAGAAAAAUUCUGCAAUCCU	27	6	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2424920-2425367	Cluster_6499	Pocillopora_meandrina_HIv1___Sc0000037	2424920	2425367	448	448	174	0.9553571428571429	+	UAUUAACAAGGUUGCUCAGUAUUGAUGCUG	22	2	428	3	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2425382-2425999	Cluster_6500	Pocillopora_meandrina_HIv1___Sc0000037	2425382	2425999	618	499	192	0.9719438877755511	+	UGAACACGUGGAUGAUGGAACAGUUCAUUG	39	1	481	2	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2431072-2431714	Cluster_6501	Pocillopora_meandrina_HIv1___Sc0000037	2431072	2431714	643	563	206	1.0	+	UCGGUCUUUAUCUGCACGUAUUCGUAUGUU	57	5	555	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2432048-2432468	Cluster_6502	Pocillopora_meandrina_HIv1___Sc0000037	2432048	2432468	421	387	48	0.9974160206718347	+	AAAGAAGUACAAGUGGUAGAA	103	148	27	210	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2449003-2449426	Cluster_6503	Pocillopora_meandrina_HIv1___Sc0000037	2449003	2449426	424	75	22	1.0	+	UGUGACUUACAUCUGAUCUUGGCUCCA	17	0	73	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2464093-2464523	Cluster_6504	Pocillopora_meandrina_HIv1___Sc0000037	2464093	2464523	431	180	39	0.9944444444444445	+	UAAUGCUGCUGAAUUCUUCCUCCAACAGGA	52	1	179	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2473274-2473815	Cluster_6505	Pocillopora_meandrina_HIv1___Sc0000037	2473274	2473815	542	596	155	0.7802013422818792	.	UGUGAAAGCGGAAUCGUUUUGCUAUGAGC	108	7	565	2	1	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2490869-2491294	Cluster_6506	Pocillopora_meandrina_HIv1___Sc0000037	2490869	2491294	426	95	42	0.9789473684210527	+	UUGUUGUGUUAUUGAUCGUGGGCUUCCAU	14	1	91	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2592424-2592899	Cluster_6507	Pocillopora_meandrina_HIv1___Sc0000037	2592424	2592899	476	3811	258	0.9997376016793492	+	CUGCAGUGAUGAGAACACUUUACCAUAGAUU	1816	182	3470	23	28	40	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2680229-2680657	Cluster_6508	Pocillopora_meandrina_HIv1___Sc0000037	2680229	2680657	429	116	19	1.0	+	AACUGAAGAAUCAAUCUCUGAAACCGAUA	65	0	115	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2733618-2734033	Cluster_6509	Pocillopora_meandrina_HIv1___Sc0000037	2733618	2734033	416	92	45	0.45652173913043476	.	CACACGAAUACGAGUAGACUUGAGG	10	1	76	1	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2790803-2791229	Cluster_6510	Pocillopora_meandrina_HIv1___Sc0000037	2790803	2791229	427	155	43	1.0	+	AGUGUGUCGGUUCUGAGCUAGCUUCU	24	2	144	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:60657-61164	Cluster_6511	Pocillopora_meandrina_HIv1___Sc0000038	60657	61164	508	887	346	0.992108229988726	+	CAAAUGGAGGCGUGGGUUC	37	515	176	104	26	33	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:211854-212281	Cluster_6512	Pocillopora_meandrina_HIv1___Sc0000038	211854	212281	428	292	126	0.6678082191780822	.	UAGGGCUAACGAACACUGGUUGGACAGU	52	22	247	8	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:212683-213109	Cluster_6513	Pocillopora_meandrina_HIv1___Sc0000038	212683	213109	427	204	84	0.10294117647058823	-	UAGAAUGAACGGCUUAAACAAACACCUU	17	10	187	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:246164-246579	Cluster_6514	Pocillopora_meandrina_HIv1___Sc0000038	246164	246579	416	171	119	0.9941520467836257	+	AAAGCUAGGACCUGAUGUAAGUCA	6	35	82	13	12	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:287118-287545	Cluster_6515	Pocillopora_meandrina_HIv1___Sc0000038	287118	287545	428	174	49	0.27011494252873564	.	UCCGAGUGCUGCACCUUCUUUCAUGGGAA	55	7	159	6	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:502976-503393	Cluster_6516	Pocillopora_meandrina_HIv1___Sc0000038	502976	503393	418	80	12	0.8875	+	CUUUCCGAGGUCGCGUUU	68	72	2	2	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:628652-629098	Cluster_6517	Pocillopora_meandrina_HIv1___Sc0000038	628652	629098	447	509	167	0.518664047151277	.	CGAUAGCACAAAAAAACUCCAGGA	99	31	294	10	9	41	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:629192-629744	Cluster_6518	Pocillopora_meandrina_HIv1___Sc0000038	629192	629744	553	657	224	0.8584474885844748	+	UACAUCCUGUAUAGAAUUCUUUAAUGAC	42	9	598	5	5	15	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:630886-631496	Cluster_6519	Pocillopora_meandrina_HIv1___Sc0000038	630886	631496	611	849	238	0.9128386336866903	+	UGGACCUUCAGAAUUUUCAGCAUUCUUA	178	13	766	9	10	23	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:631535-631961	Cluster_6520	Pocillopora_meandrina_HIv1___Sc0000038	631535	631961	427	374	60	0.9598930481283422	+	UGGGUACAGACGGUAGGUUGAUGAUCU	132	10	351	0	10	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:632216-632645	Cluster_6521	Pocillopora_meandrina_HIv1___Sc0000038	632216	632645	430	177	73	0.9378531073446328	+	AAACAACAGAAUGUUCGGACGGCUCGACG	20	4	162	4	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1141528-1142272	Cluster_6522	Pocillopora_meandrina_HIv1___Sc0000038	1141528	1142272	745	536	218	0.06343283582089553	-	UCAGACUUCAUGACUGUUUCAGAAAUAGUGG	55	1	517	2	4	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1216908-1217348	Cluster_6523	Pocillopora_meandrina_HIv1___Sc0000038	1216908	1217348	441	304	108	0.04276315789473684	-	GUAAACCAGGGGUCGAGAGU	56	202	40	35	14	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1251510-1251939	Cluster_6524	Pocillopora_meandrina_HIv1___Sc0000038	1251510	1251939	430	170	82	0.029411764705882353	-	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	39	0	163	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1252309-1253285	Cluster_6525	Pocillopora_meandrina_HIv1___Sc0000038	1252309	1253285	977	988	363	0.0728744939271255	-	UUUACCUAGAGUCUCUAAUGAUUGAACAUU	99	7	942	4	6	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1257056-1257821	Cluster_6526	Pocillopora_meandrina_HIv1___Sc0000038	1257056	1257821	766	514	224	0.03501945525291829	-	UGCGACACAAAUGGCUCUUGCACAACACA	56	5	494	2	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1257984-1258448	Cluster_6527	Pocillopora_meandrina_HIv1___Sc0000038	1257984	1258448	465	215	76	0.0	-	UACAUGUCUUCACUGUUGAGCUGGGUGA	39	2	208	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1259180-1259624	Cluster_6528	Pocillopora_meandrina_HIv1___Sc0000038	1259180	1259624	445	233	101	0.008583690987124463	-	UGAUGGGCCGUCUGGUACGCAAACGUUC	38	3	216	3	2	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1263833-1264863	Cluster_6529	Pocillopora_meandrina_HIv1___Sc0000038	1263833	1264863	1031	1325	364	0.13811320754716983	-	UACAAUACGAGUACUGUCGAACACACGGC	127	187	1103	3	5	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1269354-1269797	Cluster_6530	Pocillopora_meandrina_HIv1___Sc0000038	1269354	1269797	444	382	166	0.005235602094240838	-	UUGGAGAACGACGCCCGUAGAUGUGGGU	29	4	339	1	6	4	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1270502-1270931	Cluster_6531	Pocillopora_meandrina_HIv1___Sc0000038	1270502	1270931	430	119	37	0.008403361344537815	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	0	118	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1271207-1272267	Cluster_6532	Pocillopora_meandrina_HIv1___Sc0000038	1271207	1272267	1061	1631	394	0.5916615573267934	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	177	35	1534	15	6	17	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1272757-1273178	Cluster_6533	Pocillopora_meandrina_HIv1___Sc0000038	1272757	1273178	422	226	99	0.7964601769911505	.	UUCCAAUGCAACUGUGGAUCUGCUGAAGC	32	4	166	4	23	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1274815-1275420	Cluster_6534	Pocillopora_meandrina_HIv1___Sc0000038	1274815	1275420	606	370	142	0.008108108108108109	-	UGAAACUCUUACCUCGCUAACGCAUUUGUA	93	1	365	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1277615-1278355	Cluster_6535	Pocillopora_meandrina_HIv1___Sc0000038	1277615	1278355	741	609	292	0.0	-	UUGGAGAACGACGCCCGUAGAUGUGGGU	31	15	559	3	7	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1278888-1281935	Cluster_6536	Pocillopora_meandrina_HIv1___Sc0000038	1278888	1281935	3048	41241	3461	0.003443175480710943	-	UGGUUUCAAGACUUCAAGAAAGAUUUCAGG	7356	196	40377	116	142	186	224	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1282338-1285466	Cluster_6537	Pocillopora_meandrina_HIv1___Sc0000038	1282338	1285466	3129	44912	3671	0.0009574278589241183	-	UUUCUACCUUAAACUUCUGACUCUUAUGGU	7511	798	42914	142	186	447	425	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1285568-1286857	Cluster_6538	Pocillopora_meandrina_HIv1___Sc0000038	1285568	1286857	1290	4681	1218	0.0004272591326639607	-	UGCCAAAAGACUGUUGUGGCUCAAGGUCAC	283	52	4474	27	45	48	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1287164-1289504	Cluster_6539	Pocillopora_meandrina_HIv1___Sc0000038	1287164	1289504	2341	35927	2608	5.5668438778634455e-05	-	UGUUUACGGGUGAUUGAAUGAGAACUGGU	5482	103	35043	60	39	85	597	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1289836-1292288	Cluster_6540	Pocillopora_meandrina_HIv1___Sc0000038	1289836	1292288	2453	372330	2525	4.834421078075901e-05	-	UUCCUGCACGGCUUCAGGCAAUUCUGGC	157594	391	369979	96	172	242	1450	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1296788-1297325	Cluster_6541	Pocillopora_meandrina_HIv1___Sc0000038	1296788	1297325	538	388	139	0.03350515463917526	-	UGACGCUAUCGGUUUUAAGUUUUUGAACA	21	8	365	3	1	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1353302-1353719	Cluster_6542	Pocillopora_meandrina_HIv1___Sc0000038	1353302	1353719	418	402	76	0.0472636815920398	-	AUCCGCCAUGUGCCUCCA	223	314	22	38	13	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1390108-1390737	Cluster_6543	Pocillopora_meandrina_HIv1___Sc0000038	1390108	1390737	630	12374	541	0.9116696298690803	+	UGUGCUGGAAUUAACUGAGUUGGAGGAAC	2296	597	8347	341	1049	1656	384	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1553779-1554205	Cluster_6544	Pocillopora_meandrina_HIv1___Sc0000038	1553779	1554205	427	163	79	0.3067484662576687	.	UCCUUCGUCUAAUAUCAUGUGUAAAAUGUU	24	9	136	2	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1718391-1718867	Cluster_6545	Pocillopora_meandrina_HIv1___Sc0000038	1718391	1718867	477	570	381	0.9982456140350877	+	UGCGGAGAGAGCCUUAGAUA	8	147	227	67	47	30	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1719658-1720066	Cluster_6546	Pocillopora_meandrina_HIv1___Sc0000038	1719658	1720066	409	246	200	0.9959349593495935	+	CACGAAAUGGAUGUCCCGAAGAGAGC	4	65	111	14	20	21	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1720833-1721301	Cluster_6547	Pocillopora_meandrina_HIv1___Sc0000038	1720833	1721301	469	366	243	1.0	+	GAUGGAUUUGAAGUCUCAGUUUG	10	69	177	38	20	36	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1721507-1721926	Cluster_6548	Pocillopora_meandrina_HIv1___Sc0000038	1721507	1721926	420	208	154	1.0	+	GUAACUGAGAUGAAUGGAAGGAUU	6	49	74	22	18	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1722230-1722757	Cluster_6549	Pocillopora_meandrina_HIv1___Sc0000038	1722230	1722757	528	654	324	1.0	+	ACUGCCCAGCGGUUUAUUGUUACA	16	76	340	59	46	63	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1724166-1724826	Cluster_6550	Pocillopora_meandrina_HIv1___Sc0000038	1724166	1724826	661	627	418	0.9984051036682615	+	UUGUGUCUGUCCCUCAAGGUU	10	137	220	87	60	62	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1849728-1850468	Cluster_6551	Pocillopora_meandrina_HIv1___Sc0000038	1849728	1850468	741	395	172	0.035443037974683546	-	UUGUCGUAUUCGGCUAAUAACUCUGGGUC	24	4	383	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1851234-1851661	Cluster_6552	Pocillopora_meandrina_HIv1___Sc0000038	1851234	1851661	428	210	111	0.06190476190476191	-	UGAUAGGAGCGACUCUCGAUUUUGA	15	1	197	3	0	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1851687-1852685	Cluster_6553	Pocillopora_meandrina_HIv1___Sc0000038	1851687	1852685	999	733	346	0.0572987721691678	-	UCGAAUCGUCGGCAGACAACGCAGUGUCGA	46	9	665	31	7	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1913941-1914919	Cluster_6554	Pocillopora_meandrina_HIv1___Sc0000038	1913941	1914919	979	9368	861	0.932536293766012	+	UGAAUGCUGGUAUCUUGAUAGUAGAAC	2809	114	8224	65	754	124	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2000336-2000758	Cluster_6555	Pocillopora_meandrina_HIv1___Sc0000038	2000336	2000758	423	101	41	0.6732673267326733	.	UUGUACCGGUCCAUAUGUCAACUGUUG	20	0	95	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2024443-2025948	Cluster_6556	Pocillopora_meandrina_HIv1___Sc0000038	2024443	2025948	1506	1532	382	0.10704960835509138	-	UAGGAGCUGAAUAACUCAGAAUUGAGC	169	9	1414	7	8	11	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2048099-2048527	Cluster_6557	Pocillopora_meandrina_HIv1___Sc0000038	2048099	2048527	429	101	17	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	70	0	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2053370-2053797	Cluster_6558	Pocillopora_meandrina_HIv1___Sc0000038	2053370	2053797	428	305	112	0.33114754098360655	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	61	7	241	2	5	11	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2054249-2054677	Cluster_6559	Pocillopora_meandrina_HIv1___Sc0000038	2054249	2054677	429	155	18	0.03870967741935484	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	68	1	151	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2128900-2129794	Cluster_6560	Pocillopora_meandrina_HIv1___Sc0000038	2128900	2129794	895	401	173	0.341645885286783	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	54	11	311	7	3	17	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2129978-2130405	Cluster_6561	Pocillopora_meandrina_HIv1___Sc0000038	2129978	2130405	428	137	17	0.021897810218978103	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	59	1	133	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2153366-2153794	Cluster_6562	Pocillopora_meandrina_HIv1___Sc0000038	2153366	2153794	429	105	19	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	73	0	104	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2158209-2158833	Cluster_6563	Pocillopora_meandrina_HIv1___Sc0000038	2158209	2158833	625	309	113	0.343042071197411	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	44	6	238	2	5	15	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2159286-2159713	Cluster_6564	Pocillopora_meandrina_HIv1___Sc0000038	2159286	2159713	428	148	23	0.04054054054054054	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGU	53	0	146	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2184108-2184535	Cluster_6565	Pocillopora_meandrina_HIv1___Sc0000038	2184108	2184535	428	256	96	0.94921875	+	UGAUUAAGAACGAUAAACUGGAACGUG	47	3	247	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2184776-2186379	Cluster_6566	Pocillopora_meandrina_HIv1___Sc0000038	2184776	2186379	1604	2504	752	0.8023162939297125	+	UGAGUCUUGGAUUGAAGUACGACAUCACGUG	145	15	2271	5	9	69	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2186423-2186827	Cluster_6567	Pocillopora_meandrina_HIv1___Sc0000038	2186423	2186827	405	153	99	0.5490196078431373	.	AAUUAACGCAGCAUCCGAGAUCUUUCAGA	13	3	145	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2277716-2278611	Cluster_6568	Pocillopora_meandrina_HIv1___Sc0000038	2277716	2278611	896	1723	635	0.591990713871155	.	AUUUAUAUCAAGGAAGGCGGUGUU	92	99	1153	28	42	125	276	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2303627-2304055	Cluster_6569	Pocillopora_meandrina_HIv1___Sc0000038	2303627	2304055	429	123	27	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	77	0	119	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2308701-2309325	Cluster_6570	Pocillopora_meandrina_HIv1___Sc0000038	2308701	2309325	625	365	139	0.3698630136986301	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	55	11	276	9	7	17	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2309777-2310205	Cluster_6571	Pocillopora_meandrina_HIv1___Sc0000038	2309777	2310205	429	153	18	0.032679738562091505	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	58	0	151	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2329849-2330263	Cluster_6572	Pocillopora_meandrina_HIv1___Sc0000038	2329849	2330263	415	131	68	0.9847328244274809	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	15	0	125	1	4	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2330327-2331372	Cluster_6573	Pocillopora_meandrina_HIv1___Sc0000038	2330327	2331372	1046	2773	1025	0.7926433465560765	.	UCCUCGUACACAUCUUUCUAAAAGUUUA	111	66	2277	106	67	172	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2331388-2332875	Cluster_6574	Pocillopora_meandrina_HIv1___Sc0000038	2331388	2332875	1488	4187	1303	0.9030331979937903	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	132	45	3763	31	27	158	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2335419-2337240	Cluster_6575	Pocillopora_meandrina_HIv1___Sc0000038	2335419	2337240	1822	33306	3423	0.9282111331291659	+	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2242	426	31153	108	188	480	951	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2344734-2345161	Cluster_6576	Pocillopora_meandrina_HIv1___Sc0000038	2344734	2345161	428	180	90	0.9333333333333333	+	UGACGUCACGAUCUUUGCGCGCUACCAU	22	4	166	1	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2352207-2352634	Cluster_6577	Pocillopora_meandrina_HIv1___Sc0000038	2352207	2352634	428	123	41	0.8373983739837398	+	ACGACUAUUACGGUCAGCUGAUUACUGGA	26	0	114	0	0	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2549411-2549853	Cluster_6578	Pocillopora_meandrina_HIv1___Sc0000038	2549411	2549853	443	801	87	0.1760299625468165	-	UUUCAAACUAAGGAAGGAGAAAGGGAUA	314	4	697	4	11	10	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2558329-2558754	Cluster_6579	Pocillopora_meandrina_HIv1___Sc0000038	2558329	2558754	426	115	51	0.06956521739130435	-	CUUCCAAUCAAAGUGCGUUGUGAUCGUGU	10	1	108	4	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2694496-2695197	Cluster_6580	Pocillopora_meandrina_HIv1___Sc0000038	2694496	2695197	702	281	147	0.9288256227758007	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	30	1	266	0	4	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2696427-2696855	Cluster_6581	Pocillopora_meandrina_HIv1___Sc0000038	2696427	2696855	429	262	137	0.8625954198473282	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	26	1	242	1	0	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:44068-44495	Cluster_6582	Pocillopora_meandrina_HIv1___Sc0000039	44068	44495	428	89	23	0.0	-	GACUGAAGCACGAGCAUCAUUCACUGUGGC	31	5	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:58776-59316	Cluster_6583	Pocillopora_meandrina_HIv1___Sc0000039	58776	59316	541	3697	574	0.0	-	CAGUCCAUAUCUAGUACCUAUA	605	349	2158	289	708	65	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:85340-85766	Cluster_6584	Pocillopora_meandrina_HIv1___Sc0000039	85340	85766	427	97	27	1.0	+	GCGACACUUUGAUCCUUGAUGAUCUGG	37	0	95	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:324852-325278	Cluster_6585	Pocillopora_meandrina_HIv1___Sc0000039	324852	325278	427	158	43	0.05063291139240506	-	UGGGUACAGACGGUAGGUUGAUGAUCU	36	2	147	1	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:326234-326787	Cluster_6586	Pocillopora_meandrina_HIv1___Sc0000039	326234	326787	554	318	110	0.11320754716981132	-	UGAGAUAGUUCUUCUGAUGUUUAUG	31	14	282	2	4	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:478396-478869	Cluster_6587	Pocillopora_meandrina_HIv1___Sc0000039	478396	478869	474	1344	209	0.20907738095238096	.	UUGUAACAACUUCCACUUGUGUGUCUGUG	266	24	1125	5	14	120	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:478922-479395	Cluster_6588	Pocillopora_meandrina_HIv1___Sc0000039	478922	479395	474	569	172	0.070298769771529	-	UGAGAUAGUUCUUCUGAUGUUUAUGAUA	67	2	538	3	4	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:561562-562243	Cluster_6589	Pocillopora_meandrina_HIv1___Sc0000039	561562	562243	682	633	322	0.8846761453396524	+	UAGUUUCUUGUUCAAUGUGUUUAGAUGG	22	18	552	3	17	17	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:562253-563012	Cluster_6590	Pocillopora_meandrina_HIv1___Sc0000039	562253	563012	760	79459	2470	0.006430989566946476	-	UGAUGAACUAUCUGGUGAAUCUUCUGGU	19770	575	77535	159	279	290	621	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:563069-563756	Cluster_6591	Pocillopora_meandrina_HIv1___Sc0000039	563069	563756	688	7922	738	0.017419843473870236	-	UAAAACGAAGAUUGUCUGCACAAAUUUGC	2080	32	7248	24	108	337	173	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:564480-564984	Cluster_6592	Pocillopora_meandrina_HIv1___Sc0000039	564480	564984	505	544	207	0.9411764705882353	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	51	7	512	5	0	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565000-565536	Cluster_6593	Pocillopora_meandrina_HIv1___Sc0000039	565000	565536	537	457	203	0.9080962800875274	+	UGAACUUCUCGGCUCCAAACACUAUGG	51	5	425	4	2	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565544-565971	Cluster_6594	Pocillopora_meandrina_HIv1___Sc0000039	565544	565971	428	378	173	0.8571428571428571	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	53	2	355	3	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565978-567972	Cluster_6595	Pocillopora_meandrina_HIv1___Sc0000039	565978	567972	1995	7772	1855	0.9327071538857437	+	UAAACACACGAUUUCUAGGUAACGAACAG	1165	107	7274	54	53	117	167	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1069808-1071863	Cluster_6596	Pocillopora_meandrina_HIv1___Sc0000039	1069808	1071863	2056	5639	1299	0.028551161553466927	-	UAUUCUGGAUACUGUUUAUAUUUAAAUGAC	283	22	5327	34	32	49	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1079123-1079540	Cluster_6597	Pocillopora_meandrina_HIv1___Sc0000039	1079123	1079540	418	124	66	0.31451612903225806	.	UGACUUGGAUUUGAAUUCU	13	35	65	13	9	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1084366-1084788	Cluster_6598	Pocillopora_meandrina_HIv1___Sc0000039	1084366	1084788	423	152	77	0.5526315789473685	.	UUGGAACGUAUUCAAGAAAGGGC	24	5	82	1	1	40	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1115578-1116057	Cluster_6599	Pocillopora_meandrina_HIv1___Sc0000039	1115578	1116057	480	221	104	0.9140271493212669	+	GUGGAGUUAAAAGAAGGGACAACA	16	16	136	8	8	18	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1431207-1431924	Cluster_6600	Pocillopora_meandrina_HIv1___Sc0000039	1431207	1431924	718	2669	356	1.0	+	UGGCUGUGAUGAACUUAC	298	1658	451	390	96	38	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1582816-1583244	Cluster_6601	Pocillopora_meandrina_HIv1___Sc0000039	1582816	1583244	429	91	7	0.945054945054945	+	UGGAUUAUCAUUUUUUGUUAGUGUUGGUG	61	1	89	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1662139-1662566	Cluster_6602	Pocillopora_meandrina_HIv1___Sc0000039	1662139	1662566	428	107	44	0.0	-	UGGUGAAGGAACUAAGUUACGCUUGUAUG	26	4	96	2	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1812903-1813329	Cluster_6603	Pocillopora_meandrina_HIv1___Sc0000039	1812903	1813329	427	211	43	0.7440758293838863	.	UGGGUCUACUUCGAAUUCAUCGUUGUU	81	0	204	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2015662-2016196	Cluster_6604	Pocillopora_meandrina_HIv1___Sc0000039	2015662	2016196	535	665	250	0.0	-	UGACUAACCAGGAGAUGAUAUUU	91	72	333	12	24	170	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2019639-2020189	Cluster_6605	Pocillopora_meandrina_HIv1___Sc0000039	2019639	2020189	551	3697	706	0.0002704895861509332	-	CUUGACUAACCAGGAGAUGACAUUU	555	256	2503	78	265	362	233	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2075617-2076041	Cluster_6606	Pocillopora_meandrina_HIv1___Sc0000039	2075617	2076041	425	263	186	1.0	+	AUCUGGAUGAGACGUAUGCGAGUGCUCA	7	75	110	18	25	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2076937-2077481	Cluster_6607	Pocillopora_meandrina_HIv1___Sc0000039	2076937	2077481	545	4123	643	1.0	+	CCUGGGCUCCUAUGACAUUU	530	1336	1566	187	216	146	672	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2187027-2187479	Cluster_6608	Pocillopora_meandrina_HIv1___Sc0000039	2187027	2187479	453	443	85	0.9954853273137697	+	UCUGUUAAGAAAUACCACAAGGA	117	32	19	15	53	198	126	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2282094-2282550	Cluster_6609	Pocillopora_meandrina_HIv1___Sc0000039	2282094	2282550	457	2716	291	0.0062592047128129605	-	UUCGAUCCUAAAUUCUCUUCAUGCUUCUG	479	38	2312	24	40	223	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2285405-2285833	Cluster_6610	Pocillopora_meandrina_HIv1___Sc0000039	2285405	2285833	429	122	51	0.0	-	AGUAGUGGUUUUUUGGAUCCUGAUUGGUG	22	2	115	3	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2337808-2338367	Cluster_6611	Pocillopora_meandrina_HIv1___Sc0000039	2337808	2338367	560	650	136	0.13230769230769232	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	208	16	505	6	37	78	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2383393-2383821	Cluster_6612	Pocillopora_meandrina_HIv1___Sc0000039	2383393	2383821	429	1615	137	0.021671826625386997	-	UAUGUUUUGAUCGCUUGAGAGUUUUGUGU	624	8	1578	3	8	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2398032-2398673	Cluster_6613	Pocillopora_meandrina_HIv1___Sc0000039	2398032	2398673	642	1170	302	0.4461538461538462	.	UAUGUUUUGAUCGCUAGAGAGUUUUGUGU	126	49	988	42	38	15	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2419810-2420247	Cluster_6614	Pocillopora_meandrina_HIv1___Sc0000039	2419810	2420247	438	1928	244	0.007261410788381743	-	UGGUAGUGGUUUUUUGGAUCCUGAUUGGU	222	29	1837	16	14	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2434444-2434872	Cluster_6615	Pocillopora_meandrina_HIv1___Sc0000039	2434444	2434872	429	288	77	0.020833333333333332	-	UUCGAUCCUAAAUUCUCUUCAUGCUUCUG	76	16	212	3	5	36	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2437887-2438315	Cluster_6616	Pocillopora_meandrina_HIv1___Sc0000039	2437887	2438315	429	117	38	0.0	-	AGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	26	1	116	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2460547-2460958	Cluster_6617	Pocillopora_meandrina_HIv1___Sc0000039	2460547	2460958	412	97	57	0.010309278350515464	-	AAUGAAAUGUUUAAACGAAAAUAGUAGAAU	11	3	90	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2462945-2463371	Cluster_6618	Pocillopora_meandrina_HIv1___Sc0000039	2462945	2463371	427	159	68	0.3584905660377358	.	GGCAGUGGUUAUUUGGAUCCUGAUUGGUGU	18	10	137	2	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2491389-2491817	Cluster_6619	Pocillopora_meandrina_HIv1___Sc0000039	2491389	2491817	429	419	107	0.07637231503579953	-	UUCGAUCCUAAAUUCUCUUCAUG	58	8	206	20	25	122	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2492122-2492548	Cluster_6620	Pocillopora_meandrina_HIv1___Sc0000039	2492122	2492548	427	160	81	0.0125	-	UUUGUAAAUUGUUAAAAUGUAGGGAAUCUC	15	3	146	2	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2494721-2495151	Cluster_6621	Pocillopora_meandrina_HIv1___Sc0000039	2494721	2495151	431	733	147	0.001364256480218281	-	AGCAGUGGUUUUCUGGAUCCUGAUUGGUG	148	26	683	11	5	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:241239-241664	Cluster_6622	Pocillopora_meandrina_HIv1___Sc0000040	241239	241664	426	158	68	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	19	2	150	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:294499-295072	Cluster_6623	Pocillopora_meandrina_HIv1___Sc0000040	294499	295072	574	3407	223	0.008511887290871734	-	AAGAUGUCGAGCGAUUUCGGAACGGGUU	1168	21	3196	5	4	33	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:302280-302701	Cluster_6624	Pocillopora_meandrina_HIv1___Sc0000040	302280	302701	422	104	30	1.0	+	CUUGAAUCGUUUGGACUGCGCCA	30	7	2	11	40	37	7	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:320124-320705	Cluster_6625	Pocillopora_meandrina_HIv1___Sc0000040	320124	320705	582	1464	268	0.9672131147540983	+	UGAACCGUGCCGAUCUGCUGCCCUUUGA	278	3	1435	1	7	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:321042-321471	Cluster_6626	Pocillopora_meandrina_HIv1___Sc0000040	321042	321471	430	308	64	0.9772727272727273	+	UCCGAUUUAAAAGAUUCUUUGUUUGU	74	2	296	1	3	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:520422-520849	Cluster_6627	Pocillopora_meandrina_HIv1___Sc0000040	520422	520849	428	82	15	0.012195121951219513	-	GUGUAGAUCAGCCGACUUCAACAUGUUU	61	0	79	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:563526-564122	Cluster_6628	Pocillopora_meandrina_HIv1___Sc0000040	563526	564122	597	5746	495	0.003132613992342499	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	892	11	5680	2	5	20	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:732452-732880	Cluster_6629	Pocillopora_meandrina_HIv1___Sc0000040	732452	732880	429	80	19	0.0	-	GACUAACAGAAGGAACUUUUAAACAACGUC	34	5	74	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:786458-786886	Cluster_6630	Pocillopora_meandrina_HIv1___Sc0000040	786458	786886	429	433	104	0.18244803695150116	-	UUGUAUUUGCUGAUCUAUUUGACAUCCUU	119	18	389	5	6	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:909113-909543	Cluster_6631	Pocillopora_meandrina_HIv1___Sc0000040	909113	909543	431	854	114	0.9297423887587822	+	UGCGAUUUCGUUCCUCGUCCUUGAUGAUG	271	0	840	0	3	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:936689-937118	Cluster_6632	Pocillopora_meandrina_HIv1___Sc0000040	936689	937118	430	223	87	0.0	-	UCAGUCUCUGCAAUUCUCUGCUUUAGCAGC	22	0	217	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:956366-956777	Cluster_6633	Pocillopora_meandrina_HIv1___Sc0000040	956366	956777	412	236	176	0.2542372881355932	.	CGAGAUUACUGUGUGAUGGAUGUCCU	6	107	56	30	14	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:957810-958239	Cluster_6634	Pocillopora_meandrina_HIv1___Sc0000040	957810	958239	430	179	71	0.0223463687150838	-	UGCGAACUCGACUGCCGCCACGUGUGUA	28	2	176	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1037091-1037596	Cluster_6635	Pocillopora_meandrina_HIv1___Sc0000040	1037091	1037596	506	792	153	0.026515151515151516	-	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	176	2	773	2	4	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1102506-1102935	Cluster_6636	Pocillopora_meandrina_HIv1___Sc0000040	1102506	1102935	430	245	97	0.00816326530612245	-	UCAGUCUCUGCAAUUCUCUGCUUUAGC	19	6	229	0	1	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1137367-1138125	Cluster_6637	Pocillopora_meandrina_HIv1___Sc0000040	1137367	1138125	759	283	118	0.8197879858657244	+	UGUUCUCUGUCUUUUCACCACCGUCUG	14	7	218	8	4	6	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1139158-1139587	Cluster_6638	Pocillopora_meandrina_HIv1___Sc0000040	1139158	1139587	430	249	69	0.9156626506024096	+	AUGGAGAGCAAAAGACUGGACGAUUAGGA	28	2	222	1	2	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1156822-1157627	Cluster_6639	Pocillopora_meandrina_HIv1___Sc0000040	1156822	1157627	806	404	168	0.2524752475247525	.	GUUGACGUGAACGGUGUUAGAUGCCGAGC	30	2	386	2	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1158929-1159356	Cluster_6640	Pocillopora_meandrina_HIv1___Sc0000040	1158929	1159356	428	175	45	0.005714285714285714	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	54	0	175	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1159389-1159954	Cluster_6641	Pocillopora_meandrina_HIv1___Sc0000040	1159389	1159954	566	1198	310	0.04006677796327212	-	UAUAUCUUCUUCGGACGCCCACGGCGCG	292	1	1156	1	1	15	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1189637-1190377	Cluster_6642	Pocillopora_meandrina_HIv1___Sc0000040	1189637	1190377	741	535	185	0.680373831775701	.	GUGUAUACGAUCAGAACGGAAAUGAAUGU	125	7	477	1	10	7	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1191425-1191854	Cluster_6643	Pocillopora_meandrina_HIv1___Sc0000040	1191425	1191854	430	275	81	0.9018181818181819	+	GGAGAGCAAAAGACUGGACGAUUAGGAAA	30	3	234	0	4	19	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1210222-1211396	Cluster_6644	Pocillopora_meandrina_HIv1___Sc0000040	1210222	1211396	1175	909	377	0.9383938393839384	+	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	144	13	830	2	11	17	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1211682-1212113	Cluster_6645	Pocillopora_meandrina_HIv1___Sc0000040	1211682	1212113	432	487	190	0.9527720739219713	+	UAAUUCCAUCUUGCGCUGAUAGCUCGU	61	5	461	5	0	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1212129-1213100	Cluster_6646	Pocillopora_meandrina_HIv1___Sc0000040	1212129	1213100	972	622	308	0.8794212218649518	+	UUUGUCGUGAUCUUUCACUGCUUCUUGC	56	4	575	3	6	13	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1213107-1215104	Cluster_6647	Pocillopora_meandrina_HIv1___Sc0000040	1213107	1215104	1998	4305	1506	0.9005807200929152	+	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	384	35	4057	30	29	45	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1221387-1221814	Cluster_6648	Pocillopora_meandrina_HIv1___Sc0000040	1221387	1221814	428	277	68	0.8447653429602888	+	CAGUUCAGUAUUUUAGGAGUCGAUCCCA	61	4	204	0	6	4	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1222588-1223017	Cluster_6649	Pocillopora_meandrina_HIv1___Sc0000040	1222588	1223017	430	811	100	0.9704069050554871	+	UGUGCUCAUACCUUAGCUGUGGCUGAAAUG	202	6	798	2	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1223568-1223997	Cluster_6650	Pocillopora_meandrina_HIv1___Sc0000040	1223568	1223997	430	272	84	0.9411764705882353	+	AUGGAGAGCAAAAGACUGGACGAUUAGGA	27	5	229	1	5	14	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1315909-1316345	Cluster_6651	Pocillopora_meandrina_HIv1___Sc0000040	1315909	1316345	437	267	99	0.03745318352059925	-	UAGAAAACAUUUUCAGUCUGCAAUUCUCUGC	38	6	250	1	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1339764-1341073	Cluster_6652	Pocillopora_meandrina_HIv1___Sc0000040	1339764	1341073	1310	10147	801	0.011629052922045925	-	UGAAGACAAGUGAUUCGCAAUCGAGGGG	878	460	9086	5	27	238	331	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1459450-1460463	Cluster_6653	Pocillopora_meandrina_HIv1___Sc0000040	1459450	1460463	1014	4645	703	0.23616792249730895	.	GUGUGAAACAUGUGGCCUCAGGCAGAAAGU	754	88	3564	19	27	482	465	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1491678-1492232	Cluster_6654	Pocillopora_meandrina_HIv1___Sc0000040	1491678	1492232	555	487	156	0.3264887063655031	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	76	0	440	10	6	15	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1738924-1739371	Cluster_6655	Pocillopora_meandrina_HIv1___Sc0000040	1738924	1739371	448	4150	61	0.05301204819277108	-	AUACUGAUAAUUGUGGUGACCAGACGAAUG	1447	3	3944	39	5	40	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1782051-1782472	Cluster_6656	Pocillopora_meandrina_HIv1___Sc0000040	1782051	1782472	422	158	71	0.8987341772151899	+	UGAAGGUAACGUUUCAUCCCGACUGAGA	26	9	140	2	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1866697-1867124	Cluster_6657	Pocillopora_meandrina_HIv1___Sc0000040	1866697	1867124	428	140	29	0.9428571428571428	+	UGCGAUUACAGAGGUGCGUUGGAACUCA	90	3	136	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1873852-1874282	Cluster_6658	Pocillopora_meandrina_HIv1___Sc0000040	1873852	1874282	431	234	86	0.9358974358974359	+	UUCUGCUAGGUUUGAAGUAGCUUUCUAAAGC	101	1	228	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1895511-1896019	Cluster_6659	Pocillopora_meandrina_HIv1___Sc0000040	1895511	1896019	509	228	98	0.11403508771929824	-	UGUACCAUCUGACCUUGCCAAAAUUCGA	20	7	210	5	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1928526-1928955	Cluster_6660	Pocillopora_meandrina_HIv1___Sc0000040	1928526	1928955	430	250	53	0.004	-	UGAAUGCCGGUAUAGCAAGCUCAGCUCUGU	49	0	244	4	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1934665-1935088	Cluster_6661	Pocillopora_meandrina_HIv1___Sc0000040	1934665	1935088	424	164	67	0.17073170731707318	-	UACUGAACUUCUUCCAACCAAUGGAGA	12	2	146	0	1	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1966896-1968389	Cluster_6662	Pocillopora_meandrina_HIv1___Sc0000040	1966896	1968389	1494	3002	1069	0.2045303131245836	.	UAGAAGGAUUUGAAAAUGUCAGGCAUG	197	37	2737	28	19	43	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1968942-1969370	Cluster_6663	Pocillopora_meandrina_HIv1___Sc0000040	1968942	1969370	429	165	96	0.9212121212121213	+	UACUUGACUCUAGGAUACACAAGUUCUGG	29	1	155	0	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1969489-1970722	Cluster_6664	Pocillopora_meandrina_HIv1___Sc0000040	1969489	1970722	1234	3188	1048	0.6860100376411543	.	AGGUGUAGAAUGUAAAAAGCAGCU	142	20	2758	24	24	66	296	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2227580-2228008	Cluster_6665	Pocillopora_meandrina_HIv1___Sc0000040	2227580	2228008	429	1052	48	0.9990494296577946	+	UCGAAGAUCUUUCUCUACUGU	487	8	419	492	68	41	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2234514-2234936	Cluster_6666	Pocillopora_meandrina_HIv1___Sc0000040	2234514	2234936	423	238	90	0.9369747899159664	+	UGAAAGGCUGUGACCGAGGUCA	28	95	10	75	54	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2282624-2283051	Cluster_6667	Pocillopora_meandrina_HIv1___Sc0000040	2282624	2283051	428	252	32	0.9920634920634921	+	UUCUUUACGUGCUCAACUUCUUGAACUU	86	0	238	0	0	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2323975-2324437	Cluster_6668	Pocillopora_meandrina_HIv1___Sc0000040	2323975	2324437	463	746	100	0.967828418230563	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	484	1	716	17	7	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2425460-2426225	Cluster_6669	Pocillopora_meandrina_HIv1___Sc0000040	2425460	2426225	766	3704	411	0.45518358531317493	.	UUGUCUGUAAACAGUGCAAUACUAGCUUUGC	599	15	3499	13	14	119	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:179304-180092	Cluster_6670	Pocillopora_meandrina_HIv1___Sc0000041	179304	180092	789	602	172	0.024916943521594685	-	UUGGGUACUGGUGCACUGG	108	138	438	2	9	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:251235-251700	Cluster_6671	Pocillopora_meandrina_HIv1___Sc0000041	251235	251700	466	334	82	0.8083832335329342	+	UACUUUCUCAGUCGUAGUAACUUUCUUUG	43	51	180	11	54	3	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:396145-396575	Cluster_6672	Pocillopora_meandrina_HIv1___Sc0000041	396145	396575	431	2796	36	0.000715307582260372	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	2313	0	2794	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:433194-433603	Cluster_6673	Pocillopora_meandrina_HIv1___Sc0000041	433194	433603	410	96	33	0.7083333333333334	.	UAUGAUAUCACUGUGGAGCGAGG	24	3	50	5	1	29	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:725433-725860	Cluster_6674	Pocillopora_meandrina_HIv1___Sc0000041	725433	725860	428	86	19	0.011627906976744186	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	26	0	85	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1104897-1105322	Cluster_6675	Pocillopora_meandrina_HIv1___Sc0000041	1104897	1105322	426	226	105	0.6415929203539823	.	GUUGACGUGAACGGUGUUAGAUGCCGAGC	33	3	190	1	1	6	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1107410-1107837	Cluster_6676	Pocillopora_meandrina_HIv1___Sc0000041	1107410	1107837	428	156	35	0.00641025641025641	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	39	1	154	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1145307-1145724	Cluster_6677	Pocillopora_meandrina_HIv1___Sc0000041	1145307	1145724	418	106	3	1.0	+	AACCUGGUUGAUCCUGCA	99	106	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1287240-1287657	Cluster_6678	Pocillopora_meandrina_HIv1___Sc0000041	1287240	1287657	418	338	9	0.0	-	GAUGAGGCUCAUAAAAAU	276	338	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1434800-1435210	Cluster_6679	Pocillopora_meandrina_HIv1___Sc0000041	1434800	1435210	411	171	130	1.0	+	GAUGGUCGUACCCUGAGC	4	47	52	18	27	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1438370-1439141	Cluster_6680	Pocillopora_meandrina_HIv1___Sc0000041	1438370	1439141	772	6824	1199	0.09041617819460727	-	UGGGUCUUUUUUUUACUUCGGAAGAAUU	781	178	6308	71	29	67	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1439159-1442538	Cluster_6681	Pocillopora_meandrina_HIv1___Sc0000041	1439159	1442538	3380	9787	2364	0.1324205578829059	-	AGCAGGAAAAAAAGAUGAUGAACUUGUU	443	179	8799	118	146	207	338	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1507467-1507896	Cluster_6682	Pocillopora_meandrina_HIv1___Sc0000041	1507467	1507896	430	172	28	0.0	-	UGUGCAUUGACUGUCAUUUCUAAAUAAACU	79	0	172	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1508695-1509914	Cluster_6683	Pocillopora_meandrina_HIv1___Sc0000041	1508695	1509914	1220	16516	2288	0.03965851295713248	-	UGGAAGAAUGUUACAGUGAACUGGUUGU	1619	98	15863	42	123	184	206	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1551017-1551434	Cluster_6684	Pocillopora_meandrina_HIv1___Sc0000041	1551017	1551434	418	94	4	0.0	-	CUUUGGUGGAGAUGGAUG	87	94	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1579105-1579671	Cluster_6685	Pocillopora_meandrina_HIv1___Sc0000041	1579105	1579671	567	2306	462	0.9176062445793582	+	UUAAACCGACUCACAGUCCGAUUCGAAU	292	17	2197	9	13	23	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1754604-1755022	Cluster_6686	Pocillopora_meandrina_HIv1___Sc0000041	1754604	1755022	419	69	16	0.014492753623188406	-	UGUAGAGAUCCAGGCCUGGUAG	24	16	10	10	26	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2102529-2103805	Cluster_6687	Pocillopora_meandrina_HIv1___Sc0000041	2102529	2103805	1277	1357	517	0.09285187914517318	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	91	13	1294	4	2	14	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2103821-2104228	Cluster_6688	Pocillopora_meandrina_HIv1___Sc0000041	2103821	2104228	408	227	150	0.28634361233480177	.	UCUUGCAGAUUGAAAGGAAUUCGCCUCA	10	4	187	1	3	15	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2104670-2105097	Cluster_6689	Pocillopora_meandrina_HIv1___Sc0000041	2104670	2105097	428	140	48	0.10714285714285714	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	63	0	131	0	6	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2105181-2106409	Cluster_6690	Pocillopora_meandrina_HIv1___Sc0000041	2105181	2106409	1229	2188	882	0.14945155393053017	-	UCCAAUCACACACAGUUCUCCUGCGGC	66	24	1980	10	15	58	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2106455-2107043	Cluster_6691	Pocillopora_meandrina_HIv1___Sc0000041	2106455	2107043	589	785	250	0.29936305732484075	.	UAUAUCUCCCAGGGAGUCUCCUCUGUC	65	13	717	1	6	26	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:113049-114320	Cluster_6692	Pocillopora_meandrina_HIv1___Sc0000042	113049	114320	1272	1277	522	0.08927173061863743	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	109	13	1216	5	8	10	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:114346-114991	Cluster_6693	Pocillopora_meandrina_HIv1___Sc0000042	114346	114991	646	1445	397	0.057439446366782006	-	UGAUCUGUCGUGACUCUGAAUUAAGUUC	157	27	1347	6	8	26	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:115077-116127	Cluster_6694	Pocillopora_meandrina_HIv1___Sc0000042	115077	116127	1051	2836	736	0.17806770098730607	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	240	13	2453	18	44	68	240	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:116502-117332	Cluster_6695	Pocillopora_meandrina_HIv1___Sc0000042	116502	117332	831	953	413	0.08499475341028331	-	UCUUGACAUGGGAUGUAUUCCUUGAAUA	47	9	885	4	9	16	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:249250-249840	Cluster_6696	Pocillopora_meandrina_HIv1___Sc0000042	249250	249840	591	1916	340	0.9994780793319415	+	GGAUAGCUGACUUGUGCGAAUAUUA	289	153	1255	52	35	65	356	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:624742-625606	Cluster_6697	Pocillopora_meandrina_HIv1___Sc0000042	624742	625606	865	1417	404	0.8419195483415667	+	UGAUCUGGAAUUCCGAAUCUGGAAAAUGCA	183	10	1365	5	5	6	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:625815-626879	Cluster_6698	Pocillopora_meandrina_HIv1___Sc0000042	625815	626879	1065	1541	391	0.9208306294613887	+	UGUUAAUGUCUGUACGAGUCUCUCGUC	187	9	1460	5	18	17	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:627094-627506	Cluster_6699	Pocillopora_meandrina_HIv1___Sc0000042	627094	627506	413	242	138	0.8429752066115702	+	UGACGUAACUUUUCCAAUGAACUUAACGA	17	0	216	4	5	2	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:627868-628442	Cluster_6700	Pocillopora_meandrina_HIv1___Sc0000042	627868	628442	575	861	248	0.8072009291521487	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	118	5	812	4	7	12	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1021394-1022282	Cluster_6701	Pocillopora_meandrina_HIv1___Sc0000042	1021394	1022282	889	1007	255	0.9553128103277061	+	AGGAUCUGCAUCACCUGGAUAAAUUUGC	152	12	916	5	7	26	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1270194-1270608	Cluster_6702	Pocillopora_meandrina_HIv1___Sc0000042	1270194	1270608	415	181	101	0.0055248618784530384	-	AUCGCUUGUGGUGCCCUCG	11	84	25	21	22	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1278999-1279424	Cluster_6703	Pocillopora_meandrina_HIv1___Sc0000042	1278999	1279424	426	102	28	0.9313725490196079	+	UCGUGAUAUUCUUUAGCCUUCUGAUAUU	44	1	100	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1347342-1347770	Cluster_6704	Pocillopora_meandrina_HIv1___Sc0000042	1347342	1347770	429	127	49	1.0	+	CAAUGUGCGACGGUUUAAACUUACAAGUUA	40	9	107	3	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1622587-1623139	Cluster_6705	Pocillopora_meandrina_HIv1___Sc0000042	1622587	1623139	553	227	82	0.920704845814978	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	34	1	200	1	4	15	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1623492-1624091	Cluster_6706	Pocillopora_meandrina_HIv1___Sc0000042	1623492	1624091	600	1492	296	0.7915549597855228	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	466	12	1415	3	10	12	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1719575-1720000	Cluster_6707	Pocillopora_meandrina_HIv1___Sc0000042	1719575	1720000	426	124	34	1.0	+	UGAACUACUGCUCGUACUCUAGAUGACA	23	0	124	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1728030-1728459	Cluster_6708	Pocillopora_meandrina_HIv1___Sc0000042	1728030	1728459	430	455	118	0.8131868131868132	+	UGCGAUUACAGAGGUGCGUUGGAACUCU	154	32	407	5	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1781534-1781951	Cluster_6709	Pocillopora_meandrina_HIv1___Sc0000042	1781534	1781951	418	78	2	1.0	+	CUUCCAAGACUCCAGACA	77	78	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1908956-1910728	Cluster_6710	Pocillopora_meandrina_HIv1___Sc0000042	1908956	1910728	1773	9361	2386	0.9259694477085781	+	UGAUAGACUGCACGACGAUUUACGUCA	560	97	8501	51	91	262	359	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1910782-1911458	Cluster_6711	Pocillopora_meandrina_HIv1___Sc0000042	1910782	1911458	677	8023	558	0.9976318085504176	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2107	11	7900	5	49	23	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:45034-45462	Cluster_6712	Pocillopora_meandrina_HIv1___Sc0000043	45034	45462	429	216	122	0.8981481481481481	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	20	0	202	5	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:118478-119696	Cluster_6713	Pocillopora_meandrina_HIv1___Sc0000043	118478	119696	1219	6328	1305	0.24936788874841972	.	UGAUCAACUGAGAGCAUUAAGUAUAACUGG	479	78	5682	51	65	206	246	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:142705-143357	Cluster_6714	Pocillopora_meandrina_HIv1___Sc0000043	142705	143357	653	1640	461	0.0006097560975609756	-	UUGACUGAUGCAGUCUUUAGUAAUCUGAUGG	240	186	1081	96	77	141	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:208491-208980	Cluster_6715	Pocillopora_meandrina_HIv1___Sc0000043	208491	208980	490	1133	214	0.00353045013239188	-	AGUGAAUGAUGAAAUGUGUAUU	140	467	241	137	224	35	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:219904-220394	Cluster_6716	Pocillopora_meandrina_HIv1___Sc0000043	219904	220394	491	653	165	0.0	-	AGUGAGUGAUGAAAUGUGU	41	247	217	70	74	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:383154-383582	Cluster_6717	Pocillopora_meandrina_HIv1___Sc0000043	383154	383582	429	346	120	0.0	-	GAUCUCUCGUCCUUAUUCUGAUGA	32	11	244	4	17	10	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:439738-440714	Cluster_6718	Pocillopora_meandrina_HIv1___Sc0000043	439738	440714	977	3627	721	0.23325062034739455	.	UGUGAUCGCAUAUAGCUACUUCUGU	415	111	3300	24	22	83	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:555393-555820	Cluster_6719	Pocillopora_meandrina_HIv1___Sc0000043	555393	555820	428	76	11	0.013157894736842105	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	31	0	75	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:617191-617605	Cluster_6720	Pocillopora_meandrina_HIv1___Sc0000043	617191	617605	415	131	5	1.0	+	CUUUCCGAGGUCGCA	99	131	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:657103-657521	Cluster_6721	Pocillopora_meandrina_HIv1___Sc0000043	657103	657521	419	488	31	1.0	+	GUGGUCGAGGUGAGGGGA	117	488	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:664135-664558	Cluster_6722	Pocillopora_meandrina_HIv1___Sc0000043	664135	664558	424	271	29	0.996309963099631	+	UGGCCUGAAAAAAAAAAAAAA	37	54	60	42	34	32	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:682728-683210	Cluster_6723	Pocillopora_meandrina_HIv1___Sc0000043	682728	683210	483	237	132	0.0	-	GAAAGGAGAGUGAGAAGCCUGUUA	34	45	94	14	14	24	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:870038-870714	Cluster_6724	Pocillopora_meandrina_HIv1___Sc0000043	870038	870714	677	8252	550	0.0030295685894328648	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2216	7	8125	8	48	21	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:870768-871208	Cluster_6725	Pocillopora_meandrina_HIv1___Sc0000043	870768	871208	441	2622	500	0.031655225019069415	-	UAUUGUAUCUGAUGUUUUCAAUGGUGUA	416	26	2467	6	11	46	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:933766-934194	Cluster_6726	Pocillopora_meandrina_HIv1___Sc0000043	933766	934194	429	196	47	0.9387755102040817	+	CUCACUAGCAAUGUAUCAGAUCGUUGACU	54	5	149	6	20	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1057389-1057816	Cluster_6727	Pocillopora_meandrina_HIv1___Sc0000043	1057389	1057816	428	169	76	0.13609467455621302	-	UGUUUGAUCCAAUUCAGGAUACUUUGGCA	23	1	153	2	0	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1058179-1058608	Cluster_6728	Pocillopora_meandrina_HIv1___Sc0000043	1058179	1058608	430	715	170	0.057342657342657345	-	UGAACGAUCUUCUCACCAUCUCUUCUGGAA	164	7	685	3	0	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1070665-1071201	Cluster_6729	Pocillopora_meandrina_HIv1___Sc0000043	1070665	1071201	537	5254	703	0.0	-	AUCGGUGUUCAAUGAACUGACAGUU	773	392	3510	138	340	324	550	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1193305-1193726	Cluster_6730	Pocillopora_meandrina_HIv1___Sc0000043	1193305	1193726	422	196	126	0.9948979591836735	+	GGCGACUGCAAAUAUGAAGGU	6	80	48	29	17	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1196585-1197090	Cluster_6731	Pocillopora_meandrina_HIv1___Sc0000043	1196585	1197090	506	698	361	1.0	+	UCGAGACAGACACUUUGGCU	24	213	240	53	78	44	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1197261-1197923	Cluster_6732	Pocillopora_meandrina_HIv1___Sc0000043	1197261	1197923	663	524	360	1.0	+	AUGAACUGAAGCCGUUGCUGGAACGACCACU	9	127	233	36	34	39	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1198022-1198576	Cluster_6733	Pocillopora_meandrina_HIv1___Sc0000043	1198022	1198576	555	276	191	1.0	+	GUCUUAGCGAGGACUGCAGCGU	6	84	86	34	32	20	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1198788-1199302	Cluster_6734	Pocillopora_meandrina_HIv1___Sc0000043	1198788	1199302	515	564	304	1.0	+	UGUGAUCUUUUCGGAACCGAGGAACA	30	102	273	26	37	46	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1199682-1200151	Cluster_6735	Pocillopora_meandrina_HIv1___Sc0000043	1199682	1200151	470	405	249	1.0	+	GAGACUGAGGAACAACGUACCCA	11	80	147	47	42	48	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1200357-1200876	Cluster_6736	Pocillopora_meandrina_HIv1___Sc0000043	1200357	1200876	520	1119	324	1.0	+	UCAGUCGUUUGGUGGAAACCUUA	243	118	475	74	71	319	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1201226-1201716	Cluster_6737	Pocillopora_meandrina_HIv1___Sc0000043	1201226	1201716	491	463	298	1.0	+	GGCAAUGGCUGCUGGAAGCUCU	14	101	178	38	67	28	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1201775-1202262	Cluster_6738	Pocillopora_meandrina_HIv1___Sc0000043	1201775	1202262	488	505	303	1.0	+	GUUGUCCAAGCAGACGAGACUCU	13	123	192	36	55	61	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1202372-1202797	Cluster_6739	Pocillopora_meandrina_HIv1___Sc0000043	1202372	1202797	426	258	177	0.9922480620155039	+	CAGCUGUGUAUGCUCUACGAAGA	6	53	133	17	21	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1202918-1203421	Cluster_6740	Pocillopora_meandrina_HIv1___Sc0000043	1202918	1203421	504	675	435	1.0	+	AGCGGUGUUCAACUUGGUAGUCA	15	141	272	50	63	76	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1204969-1205448	Cluster_6741	Pocillopora_meandrina_HIv1___Sc0000043	1204969	1205448	480	367	273	1.0	+	GACCGAAACGAAGCUUAGACAAGA	6	90	146	31	36	31	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1205695-1206724	Cluster_6742	Pocillopora_meandrina_HIv1___Sc0000043	1205695	1206724	1030	815	523	1.0	+	CCCGAUCAAGUCACUCUUAGUGGAAAAUUG	9	244	330	63	62	50	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1207095-1207525	Cluster_6743	Pocillopora_meandrina_HIv1___Sc0000043	1207095	1207525	431	209	133	1.0	+	AUCUACAGGAACACAGAGCUGGACGGAUUUG	11	57	102	16	8	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1207805-1208251	Cluster_6744	Pocillopora_meandrina_HIv1___Sc0000043	1207805	1208251	447	299	219	1.0	+	AACUGGACUCUGAAGGCA	6	77	113	28	33	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1208427-1209617	Cluster_6745	Pocillopora_meandrina_HIv1___Sc0000043	1208427	1209617	1191	1145	789	0.9991266375545852	+	CGCCUCGCGACAGUUGUGUAUAUU	7	268	492	116	97	82	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1210088-1210640	Cluster_6746	Pocillopora_meandrina_HIv1___Sc0000043	1210088	1210640	553	680	403	0.9970588235294118	+	AAAAAAUUGAGGCUGACGU	11	165	291	59	46	60	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1210927-1211411	Cluster_6747	Pocillopora_meandrina_HIv1___Sc0000043	1210927	1211411	485	391	232	1.0	+	AAUGAUGUGCUACAAACUUCUGAAAAAGU	23	54	210	25	39	34	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1211639-1212558	Cluster_6748	Pocillopora_meandrina_HIv1___Sc0000043	1211639	1212558	920	776	519	0.9961340206185567	+	GUUUGCACCGUGGAGCAGGACA	8	191	283	90	83	64	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1212786-1213213	Cluster_6749	Pocillopora_meandrina_HIv1___Sc0000043	1212786	1213213	428	329	176	1.0	+	UCAAGUAGAGAUCGUGCGUGGAAGCA	15	105	108	49	20	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1213344-1213862	Cluster_6750	Pocillopora_meandrina_HIv1___Sc0000043	1213344	1213862	519	456	303	1.0	+	GGCAUGUGUGGUGACUGUAAUGCAGAACA	10	102	175	40	55	38	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1213865-1214748	Cluster_6751	Pocillopora_meandrina_HIv1___Sc0000043	1213865	1214748	884	1662	866	1.0	+	UGCGCUCUUCGUAACUUACAUUUCUGUUCA	57	310	837	91	154	132	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1520958-1521381	Cluster_6752	Pocillopora_meandrina_HIv1___Sc0000043	1520958	1521381	424	145	84	0.1724137931034483	-	AGUUGACAUAUUGACUGGUAUAAACAAGGG	8	3	119	1	2	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1688244-1690419	Cluster_6753	Pocillopora_meandrina_HIv1___Sc0000043	1688244	1690419	2176	2883	912	0.9673950745750954	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	684	25	2760	7	11	26	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1691428-1692471	Cluster_6754	Pocillopora_meandrina_HIv1___Sc0000043	1691428	1692471	1044	3577	800	0.9815487838971205	+	UUGGAAUUGGUAGAACUGACUUUACCA	435	19	3468	11	14	31	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1692607-1694204	Cluster_6755	Pocillopora_meandrina_HIv1___Sc0000043	1692607	1694204	1598	1547	731	0.8758888170652877	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	95	13	1409	4	12	31	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1834980-1835476	Cluster_6756	Pocillopora_meandrina_HIv1___Sc0000043	1834980	1835476	497	477	229	0.2809224318658281	.	UAAGAGCGUCUCAUUUUCUCAAUUGCUG	20	18	408	2	7	21	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:6319-6735	Cluster_6757	Pocillopora_meandrina_HIv1___Sc0000044	6319	6735	417	73	25	1.0	+	ACUUAAUGGACUAGAACUUCGCCA	13	22	13	13	7	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:124779-125205	Cluster_6758	Pocillopora_meandrina_HIv1___Sc0000044	124779	125205	427	308	77	0.8474025974025974	+	GCGACAACUUUCGGCUACAAAUCGUGC	132	28	253	8	8	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:364704-365124	Cluster_6759	Pocillopora_meandrina_HIv1___Sc0000044	364704	365124	421	105	59	0.7619047619047619	.	AAAGGAUAGAACUGACCGGUCAGG	16	1	65	5	8	3	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:409810-410234	Cluster_6760	Pocillopora_meandrina_HIv1___Sc0000044	409810	410234	425	40146	159	0.0	-	UUCCAAAUCUGUGAUGUUAUUGA	33115	126	78	69	1058	37607	1208	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:420597-421023	Cluster_6761	Pocillopora_meandrina_HIv1___Sc0000044	420597	421023	427	230	132	0.8782608695652174	+	UGAGUCGAGGUUAUUCACAAUACGAGC	34	2	206	2	1	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:421261-421918	Cluster_6762	Pocillopora_meandrina_HIv1___Sc0000044	421261	421918	658	1101	325	0.9182561307901907	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	106	7	1046	1	2	30	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:422138-422793	Cluster_6763	Pocillopora_meandrina_HIv1___Sc0000044	422138	422793	656	630	297	0.5714285714285714	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	31	6	552	3	4	19	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:422942-423589	Cluster_6764	Pocillopora_meandrina_HIv1___Sc0000044	422942	423589	648	630	268	0.8555555555555555	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	115	4	570	10	4	15	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:557949-558378	Cluster_6765	Pocillopora_meandrina_HIv1___Sc0000044	557949	558378	430	109	21	1.0	+	UAAGAGCAGAAUCUCAUUGAUCUAUUUUAGA	60	4	98	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:569299-570194	Cluster_6766	Pocillopora_meandrina_HIv1___Sc0000044	569299	570194	896	1281	322	0.38485558157689304	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	217	9	1201	13	11	14	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:587677-588131	Cluster_6767	Pocillopora_meandrina_HIv1___Sc0000044	587677	588131	455	6169	164	0.9998378991732858	+	UUACUCUUGACGCUUAUAUCACU	1751	135	57	252	1729	3531	465	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:883695-884124	Cluster_6768	Pocillopora_meandrina_HIv1___Sc0000044	883695	884124	430	304	63	0.9835526315789473	+	CGAUCCAACAAGAACAGUAUGUGCUGACU	83	1	295	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:930296-930705	Cluster_6769	Pocillopora_meandrina_HIv1___Sc0000044	930296	930705	410	108	39	0.0	-	UUGGUUUGUGUACGCUUGGAGUU	30	0	58	0	8	36	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1020355-1020763	Cluster_6770	Pocillopora_meandrina_HIv1___Sc0000044	1020355	1020763	409	247	187	0.004048582995951417	-	CUAGGCAUUUUUAUUGACUGAAA	5	58	111	18	17	22	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1087018-1087438	Cluster_6771	Pocillopora_meandrina_HIv1___Sc0000044	1087018	1087438	421	255	24	0.9921568627450981	+	UAAUCUGAAGGUCGUGAGU	54	226	0	29	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1108933-1109346	Cluster_6772	Pocillopora_meandrina_HIv1___Sc0000044	1108933	1109346	414	177	66	0.011299435028248588	-	UAAUCCCAUCGAUUCUGCAGCCGCCAUU	28	2	166	1	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1109942-1110423	Cluster_6773	Pocillopora_meandrina_HIv1___Sc0000044	1109942	1110423	482	10974	489	0.0030982321851649353	-	UAAUCAACUGUGGCUGUGCGAUGUUCUGC	3244	77	10718	23	22	72	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1155525-1155945	Cluster_6774	Pocillopora_meandrina_HIv1___Sc0000044	1155525	1155945	421	991	32	0.9989909182643795	+	CGGCCUGAAAAAAAAAAA	622	907	20	44	19	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1219142-1219560	Cluster_6775	Pocillopora_meandrina_HIv1___Sc0000044	1219142	1219560	419	92	50	0.0	-	UAUUGAAAAUGAUUUUGGAAUGGAUCCA	14	1	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1339185-1339613	Cluster_6776	Pocillopora_meandrina_HIv1___Sc0000044	1339185	1339613	429	90	23	0.0	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	41	0	89	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1381470-1381889	Cluster_6777	Pocillopora_meandrina_HIv1___Sc0000044	1381470	1381889	420	72	22	0.0	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	33	1	71	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1474411-1474829	Cluster_6778	Pocillopora_meandrina_HIv1___Sc0000044	1474411	1474829	419	355	26	0.0	-	AACUUUUGACGGUGGGUCU	114	353	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1500329-1500759	Cluster_6779	Pocillopora_meandrina_HIv1___Sc0000044	1500329	1500759	431	271	69	0.01107011070110701	-	UGUUACGUCGUGGUAGUCUUCCGAUGAGGC	43	1	264	0	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1605931-1606361	Cluster_6780	Pocillopora_meandrina_HIv1___Sc0000044	1605931	1606361	431	330	148	0.04242424242424243	-	UGAUAACUGUACUCUUGAAAUUCAUCGA	20	5	315	1	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1606380-1606804	Cluster_6781	Pocillopora_meandrina_HIv1___Sc0000044	1606380	1606804	425	239	131	0.1087866108786611	-	UAUCCUUAAUCUUGAUGGCUCGAGACGU	16	3	226	3	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1609462-1609889	Cluster_6782	Pocillopora_meandrina_HIv1___Sc0000044	1609462	1609889	428	84	27	0.023809523809523808	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	26	0	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1619070-1620250	Cluster_6783	Pocillopora_meandrina_HIv1___Sc0000044	1619070	1620250	1181	1710	665	0.06198830409356725	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	100	30	1579	8	9	33	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1620553-1621144	Cluster_6784	Pocillopora_meandrina_HIv1___Sc0000044	1620553	1621144	592	528	295	0.058712121212121215	-	UCCGUUUCGCUUGACUACUGGGACAAUUG	18	2	499	2	2	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1621250-1621668	Cluster_6785	Pocillopora_meandrina_HIv1___Sc0000044	1621250	1621668	419	128	63	0.109375	-	UGUAAUCAUACGCUUAGCCUCAGUGAACGCU	15	1	115	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1621743-1622216	Cluster_6786	Pocillopora_meandrina_HIv1___Sc0000044	1621743	1622216	474	286	126	0.03146853146853147	-	UAGGUAAUGGCACAAACUGAGAGGCGU	31	0	271	3	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1640462-1640962	Cluster_6787	Pocillopora_meandrina_HIv1___Sc0000044	1640462	1640962	501	200	95	0.01	-	UGUACGUUGACUCUACUGACUUGAGACCUC	19	0	197	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:182701-183119	Cluster_6788	Pocillopora_meandrina_HIv1___Sc0000045	182701	183119	419	172	71	0.03488372093023256	-	UAUUUGCACCGUUUUUCUUGAAUAUAGA	17	0	163	0	2	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:183195-183615	Cluster_6789	Pocillopora_meandrina_HIv1___Sc0000045	183195	183615	421	75	22	0.013333333333333334	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	26	1	74	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:184675-185344	Cluster_6790	Pocillopora_meandrina_HIv1___Sc0000045	184675	185344	670	667	245	0.09145427286356822	-	UUGGUAUCAUCUCCGAGGCUGUUGUAUC	108	12	610	2	7	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:234132-234612	Cluster_6791	Pocillopora_meandrina_HIv1___Sc0000045	234132	234612	481	2156	224	0.9948979591836735	+	CAACAAAUCAAACUUAGAGGCUCUUCAGC	319	7	2097	13	4	9	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:284932-285360	Cluster_6792	Pocillopora_meandrina_HIv1___Sc0000045	284932	285360	429	7693	134	0.000519953204211621	-	AUUGCAAGCAAACGGCUAGGAGUCUUCU	3361	16	7608	6	6	5	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:294530-294958	Cluster_6793	Pocillopora_meandrina_HIv1___Sc0000045	294530	294958	429	430	107	0.9697674418604652	+	UGUAGAAUCAAUCUGUUACUAAGACACC	85	0	408	10	1	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:295037-295522	Cluster_6794	Pocillopora_meandrina_HIv1___Sc0000045	295037	295522	486	269	146	0.8773234200743495	+	UGUCUAUCUGUGAGAAUGCCAUUGGAU	9	4	236	3	1	3	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:295733-296153	Cluster_6795	Pocillopora_meandrina_HIv1___Sc0000045	295733	296153	421	203	129	0.8275862068965517	+	UGGACUCUAUAAUGUCUUUAAACAUGGU	11	5	181	0	2	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:296743-297264	Cluster_6796	Pocillopora_meandrina_HIv1___Sc0000045	296743	297264	522	568	203	0.8116197183098591	+	UGUAUUCACUUGGGUUAACUCUUCCACA	94	0	548	1	4	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:351507-351935	Cluster_6797	Pocillopora_meandrina_HIv1___Sc0000045	351507	351935	429	98	26	0.09183673469387756	-	UGUAUCUUCAGAGGAUUUCGGAUCGCUCA	64	2	93	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:791112-791534	Cluster_6798	Pocillopora_meandrina_HIv1___Sc0000045	791112	791534	423	120	30	0.0	-	UAACAUGAAGAUAUGAAAUUCCUA	42	4	9	1	0	54	52	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:792311-792733	Cluster_6799	Pocillopora_meandrina_HIv1___Sc0000045	792311	792733	423	253	21	0.0	-	UAACAUGAAGACGUUGAAUUUCU	108	29	7	11	59	108	39	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:826503-826931	Cluster_6800	Pocillopora_meandrina_HIv1___Sc0000045	826503	826931	429	88	22	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	1	86	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:219132-220447	Cluster_6801	Pocillopora_meandrina_HIv1___Sc0000046	219132	220447	1316	12505	1133	0.9951219512195122	+	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUGG	4230	89	12127	122	38	52	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:222590-223018	Cluster_6802	Pocillopora_meandrina_HIv1___Sc0000046	222590	223018	429	237	79	1.0	+	UGAACUGUCUGCUGCUGAUGAUGAUGAGC	89	9	214	1	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:223387-223816	Cluster_6803	Pocillopora_meandrina_HIv1___Sc0000046	223387	223816	430	228	102	1.0	+	UUGGAUAAUGCUGACAACUUGGGCAAUACC	40	5	213	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:231177-231605	Cluster_6804	Pocillopora_meandrina_HIv1___Sc0000046	231177	231605	429	249	90	1.0	+	UAAGUUCACUGAAAAGGUCUAGACGUUCAAG	31	5	240	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:235152-235750	Cluster_6805	Pocillopora_meandrina_HIv1___Sc0000046	235152	235750	599	598	193	0.9882943143812709	+	UGUAUGCUGUUUGUUGGACGUUGCUGAUA	103	10	558	5	10	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:241309-241886	Cluster_6806	Pocillopora_meandrina_HIv1___Sc0000046	241309	241886	578	336	142	0.9970238095238095	+	UGAAGACGGUGAUAAACGAAUUUAUUCUGU	70	7	323	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:242202-242741	Cluster_6807	Pocillopora_meandrina_HIv1___Sc0000046	242202	242741	540	783	256	1.0	+	UGAAACUAGCCUCUGGAUGUAAAGGAC	35	4	723	3	22	10	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:244759-246061	Cluster_6808	Pocillopora_meandrina_HIv1___Sc0000046	244759	246061	1303	2474	420	0.8965238480194018	+	UCCACAUGGAUUCUUAACCCAGCAAUAGACC	319	43	2328	15	14	26	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:246101-247174	Cluster_6809	Pocillopora_meandrina_HIv1___Sc0000046	246101	247174	1074	10036	1255	0.9799721004384216	+	UAGGAGCUGAAUAACUCAGAAUUGAGC	1367	55	9621	24	48	102	186	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:248155-248584	Cluster_6810	Pocillopora_meandrina_HIv1___Sc0000046	248155	248584	430	251	88	0.9960159362549801	+	UGCCUCAAUUAUUUGUUUCCACUGUUGAUC	105	1	245	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:254125-254646	Cluster_6811	Pocillopora_meandrina_HIv1___Sc0000046	254125	254646	522	3347	312	0.9940244995518375	+	UGCACUCUGCCAAUUUCUCGUUCAAUUCG	1161	27	3210	10	17	52	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:254949-255374	Cluster_6812	Pocillopora_meandrina_HIv1___Sc0000046	254949	255374	426	131	56	1.0	+	UUUUUAAAAUAAGACUCUCGGAAAUGCGUU	25	1	128	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:255660-256064	Cluster_6813	Pocillopora_meandrina_HIv1___Sc0000046	255660	256064	405	187	103	1.0	+	UACUUCCCACUUUUGGACCAUUAAUGAGA	18	4	172	2	6	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:256240-256670	Cluster_6814	Pocillopora_meandrina_HIv1___Sc0000046	256240	256670	431	444	158	1.0	+	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	68	2	419	5	9	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:256899-257308	Cluster_6815	Pocillopora_meandrina_HIv1___Sc0000046	256899	257308	410	199	109	1.0	+	UAAGUUACACUGAUUUAACUCCUUUACA	12	2	194	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:257445-257872	Cluster_6816	Pocillopora_meandrina_HIv1___Sc0000046	257445	257872	428	328	121	1.0	+	UGGGUGUAGUGCUGAAUACUGCAGCAUU	95	2	317	0	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:261258-262127	Cluster_6817	Pocillopora_meandrina_HIv1___Sc0000046	261258	262127	870	6755	628	0.971280532938564	+	UGACCUAAAAUGUAGUGAACAGACUUUU	989	113	6036	44	94	152	316	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:263488-263914	Cluster_6818	Pocillopora_meandrina_HIv1___Sc0000046	263488	263914	427	211	84	0.995260663507109	+	UAUUGACUUUGGUCCUUGUAUGAGGGAGA	31	3	205	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:265288-265716	Cluster_6819	Pocillopora_meandrina_HIv1___Sc0000046	265288	265716	429	399	124	0.9974937343358395	+	UUCAUUCUCUAAACAUCUUUCUCUGUUU	83	3	393	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:266491-266920	Cluster_6820	Pocillopora_meandrina_HIv1___Sc0000046	266491	266920	430	223	77	1.0	+	UGUGUAGAAGUUGUCCACAUAGAGAAGAUG	85	4	217	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:269962-270503	Cluster_6821	Pocillopora_meandrina_HIv1___Sc0000046	269962	270503	542	399	142	0.9974937343358395	+	UGAUGUUGCUGUUCUGGCUUUUCCAAGU	30	3	383	2	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:277575-278003	Cluster_6822	Pocillopora_meandrina_HIv1___Sc0000046	277575	278003	429	302	119	0.9966887417218543	+	UGGUUAUCUGCAAUUUGUGUCAAAAUAUGU	35	2	294	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:278266-279149	Cluster_6823	Pocillopora_meandrina_HIv1___Sc0000046	278266	279149	884	1040	339	0.9903846153846154	+	UUGGCAUUAAUUUUUGAACGGUUGGAACACC	79	11	992	3	11	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:280694-281698	Cluster_6824	Pocillopora_meandrina_HIv1___Sc0000046	280694	281698	1005	566	183	0.9240282685512368	+	UGCUUGACUUAUAGUCACUGUACAACUGACU	64	11	520	4	5	15	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:290983-291409	Cluster_6825	Pocillopora_meandrina_HIv1___Sc0000046	290983	291409	427	121	51	0.9752066115702479	+	UCUGCCUCAUUUAAGAACUCUAGCCCAAGG	22	0	113	2	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:293250-293669	Cluster_6826	Pocillopora_meandrina_HIv1___Sc0000046	293250	293669	420	176	92	0.9943181818181818	+	UCUAACCAUCUGAAUGAGAGCCAUCGCAUC	16	0	172	3	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:307283-309048	Cluster_6827	Pocillopora_meandrina_HIv1___Sc0000046	307283	309048	1766	14681	1545	0.8001498535522104	+	UAUAGAUGUAGCUCUUGGUAUGUGCCA	1778	87	12813	63	186	618	914	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:309715-310136	Cluster_6828	Pocillopora_meandrina_HIv1___Sc0000046	309715	310136	422	176	94	0.9090909090909091	+	UAGCCUUCUCUGAAAAACUUGUAAAUCUUC	11	1	164	1	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:311089-311636	Cluster_6829	Pocillopora_meandrina_HIv1___Sc0000046	311089	311636	548	1419	266	0.9936575052854123	+	UGUGAAUUUACUGACCAUCUCGACAUUGGUA	186	9	1379	2	12	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:319687-320119	Cluster_6830	Pocillopora_meandrina_HIv1___Sc0000046	319687	320119	433	288	105	0.9201388888888888	+	UACGUGUAGAAAGCCUUCUCUGACAUC	20	2	264	2	1	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:320338-320869	Cluster_6831	Pocillopora_meandrina_HIv1___Sc0000046	320338	320869	532	202	119	0.9653465346534653	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	18	1	195	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:321062-322202	Cluster_6832	Pocillopora_meandrina_HIv1___Sc0000046	321062	322202	1141	4601	1112	0.9563138448163443	+	UUAGUAACUCAGCUCUCAUUGUGCCAUC	200	49	4418	9	26	33	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:330775-331195	Cluster_6833	Pocillopora_meandrina_HIv1___Sc0000046	330775	331195	421	139	51	0.9928057553956835	+	UCUUGUAACCGUGAUAGCUCAGGCUGACU	21	2	137	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:331848-332271	Cluster_6834	Pocillopora_meandrina_HIv1___Sc0000046	331848	332271	424	102	50	1.0	+	UCAUUUUCUGAAGGAGCUUAGAAACCAGA	8	3	97	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:332705-333133	Cluster_6835	Pocillopora_meandrina_HIv1___Sc0000046	332705	333133	429	335	126	0.9970149253731343	+	UGUGAAAUAGUGUCUGAUACAAGAAGGUC	30	6	301	8	10	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:336248-337540	Cluster_6836	Pocillopora_meandrina_HIv1___Sc0000046	336248	337540	1293	13838	1324	0.9739124150888857	+	UAGAGUGGAUGCAUUCUGAUCUUUACCA	1639	67	13452	28	31	65	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:344572-345940	Cluster_6837	Pocillopora_meandrina_HIv1___Sc0000046	344572	345940	1369	786	436	0.08269720101781171	-	UAAUUUGCACUCUUCAUAGAUCCCUAAAGG	24	16	714	3	24	8	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:353960-354387	Cluster_6838	Pocillopora_meandrina_HIv1___Sc0000046	353960	354387	428	216	30	1.0	+	UAAAGCUUGGGGUAAUAGAUUUCUGUCU	53	0	215	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:363046-363474	Cluster_6839	Pocillopora_meandrina_HIv1___Sc0000046	363046	363474	429	197	45	0.9187817258883249	+	UGGAAAACCAUCUUGAACCGCUUAAAGCA	77	1	187	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:402469-402899	Cluster_6840	Pocillopora_meandrina_HIv1___Sc0000046	402469	402899	431	572	80	0.9912587412587412	+	UGCAUACUGUUUGCUCUUGAAUUUCAUCA	277	0	567	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:403060-403650	Cluster_6841	Pocillopora_meandrina_HIv1___Sc0000046	403060	403650	591	286	131	0.8811188811188811	+	UAGGAACGCUUUGAAUUUCUCUGAGACA	15	5	254	1	0	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:404017-405352	Cluster_6842	Pocillopora_meandrina_HIv1___Sc0000046	404017	405352	1336	7767	1072	0.9378138277327154	+	UGAAGAACUUGAUCGAUUACAUGUUGAUA	3409	28	7498	19	30	58	134	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:405422-406276	Cluster_6843	Pocillopora_meandrina_HIv1___Sc0000046	405422	406276	855	528	246	0.8484848484848485	+	UAAGACCGUAUGGACCUGUUUUCUGACUGGC	35	9	468	5	7	14	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:410127-410555	Cluster_6844	Pocillopora_meandrina_HIv1___Sc0000046	410127	410555	429	142	54	1.0	+	UGAAUUCUUGAAUACUGCUUUGGGUCAGCA	29	1	140	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:411343-411770	Cluster_6845	Pocillopora_meandrina_HIv1___Sc0000046	411343	411770	428	317	69	0.9968454258675079	+	UUAUUUCCAUUUCUGCAUGAGUUUGAGC	200	1	315	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:419043-419455	Cluster_6846	Pocillopora_meandrina_HIv1___Sc0000046	419043	419455	413	90	30	0.9555555555555556	+	UCUGUCUAGUGUUCCACCUUCUGUACAUU	29	3	83	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:426261-426690	Cluster_6847	Pocillopora_meandrina_HIv1___Sc0000046	426261	426690	430	386	89	0.9922279792746114	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	186	7	347	1	0	5	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:439425-439855	Cluster_6848	Pocillopora_meandrina_HIv1___Sc0000046	439425	439855	431	384	79	1.0	+	CAACAAUCGUGAAAUUGCUCGUGAAUAUGGC	159	3	374	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:440926-441351	Cluster_6849	Pocillopora_meandrina_HIv1___Sc0000046	440926	441351	426	114	30	0.9912280701754386	+	UGUUACUCUCAGAUCUUGGCAGACGCCU	23	2	112	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:453172-453577	Cluster_6850	Pocillopora_meandrina_HIv1___Sc0000046	453172	453577	406	190	107	0.9947368421052631	+	UGUGACUGAGGCUUGUUUUGAUAACUC	9	2	175	1	0	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:459439-459856	Cluster_6851	Pocillopora_meandrina_HIv1___Sc0000046	459439	459856	418	105	38	1.0	+	UUGGCACGUGUCCAUCUUUGAUUUCUGA	20	0	104	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:462155-462564	Cluster_6852	Pocillopora_meandrina_HIv1___Sc0000046	462155	462564	410	75	40	1.0	+	UAUCCGGUUGUAACGCUAGACAGUCACGCU	12	1	74	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:464181-464610	Cluster_6853	Pocillopora_meandrina_HIv1___Sc0000046	464181	464610	430	201	63	0.2935323383084577	.	UAUCUGAGCAUUUCAUAACAAUGUAACUUC	57	0	186	0	1	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:527203-527729	Cluster_6854	Pocillopora_meandrina_HIv1___Sc0000046	527203	527729	527	1008	122	0.1388888888888889	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	219	2	997	1	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:657920-658503	Cluster_6855	Pocillopora_meandrina_HIv1___Sc0000046	657920	658503	584	800	250	0.02125	-	UGACUGACUGUGCUUGUGUACGAUACACGAC	69	3	772	4	2	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:658899-659487	Cluster_6856	Pocillopora_meandrina_HIv1___Sc0000046	658899	659487	589	236	111	0.025423728813559324	-	UGUGUAGAUAUGUCUUUUGGACAGGA	29	5	225	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000049:27861-28457	Cluster_6857	Pocillopora_meandrina_HIv1___Sc0000049	27861	28457	597	5676	501	0.9968287526427061	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	842	8	5603	3	6	17	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:92873-93301	Cluster_6858	Pocillopora_meandrina_HIv1___Sc0000051	92873	93301	429	101	15	0.9900990099009901	+	UGUUUACGGGUGACUGAAGAAGAACUGGU	73	0	100	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:130033-130444	Cluster_6859	Pocillopora_meandrina_HIv1___Sc0000051	130033	130444	412	128	54	0.796875	.	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	15	4	121	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:159395-159820	Cluster_6860	Pocillopora_meandrina_HIv1___Sc0000051	159395	159820	426	136	72	0.8970588235294118	+	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	14	2	129	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:3818-4246	Cluster_6861	Pocillopora_meandrina_HIv1___Sc0000055	3818	4246	429	401	31	0.0	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	303	0	399	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:22288-22718	Cluster_6862	Pocillopora_meandrina_HIv1___Sc0000055	22288	22718	431	400	119	0.935	+	UGACUGUUGACCACCAAGAUUUGGAUC	60	0	339	2	22	20	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:55728-56159	Cluster_6863	Pocillopora_meandrina_HIv1___Sc0000055	55728	56159	432	1986	45	0.972809667673716	+	UAAAAUCCGAAAAAUUCGAAAUGGAAGGCUG	1619	2	1932	4	0	15	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:111446-111876	Cluster_6864	Pocillopora_meandrina_HIv1___Sc0000055	111446	111876	431	302	133	0.1456953642384106	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	61	9	267	4	1	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000057:62935-63402	Cluster_6865	Pocillopora_meandrina_HIv1___Sc0000057	62935	63402	468	307	118	0.8273615635179153	+	AUAUAUCCUAUACGCAUCUGAUAACAUUUUC	32	30	234	6	16	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:1689-2114	Cluster_6866	Pocillopora_meandrina_HIv1___Sc0000061	1689	2114	426	329	128	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	29	68	157	9	23	39	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:2321-2731	Cluster_6867	Pocillopora_meandrina_HIv1___Sc0000061	2321	2731	411	198	122	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	42	91	11	14	25	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:3907-4329	Cluster_6868	Pocillopora_meandrina_HIv1___Sc0000061	3907	4329	423	137	78	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	9	35	60	7	7	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:11377-11803	Cluster_6869	Pocillopora_meandrina_HIv1___Sc0000061	11377	11803	427	424	153	0.0023584905660377358	-	GGAAUACCCCGUGUUGUAGGCUU	30	88	184	15	30	62	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:12009-12419	Cluster_6870	Pocillopora_meandrina_HIv1___Sc0000061	12009	12419	411	166	103	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	30	82	11	14	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:13595-14020	Cluster_6871	Pocillopora_meandrina_HIv1___Sc0000061	13595	14020	426	420	144	0.002380952380952381	-	CUGGGAAUACCCCGUGUUGUAGGCUU	32	86	180	10	35	59	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:14227-14637	Cluster_6872	Pocillopora_meandrina_HIv1___Sc0000061	14227	14637	411	201	117	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	9	53	90	10	11	23	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:15813-16238	Cluster_6873	Pocillopora_meandrina_HIv1___Sc0000061	15813	16238	426	414	151	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	33	104	181	19	29	47	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:16445-16855	Cluster_6874	Pocillopora_meandrina_HIv1___Sc0000061	16445	16855	411	211	139	1.0	+	AAUAUCUGAUACGCUGCUCAUUGAGCA	8	41	100	15	16	25	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:18031-18456	Cluster_6875	Pocillopora_meandrina_HIv1___Sc0000061	18031	18456	426	409	159	0.004889975550122249	-	GGAAUACCCCGUGUUGUAGGCUU	21	80	182	19	29	52	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:18663-19073	Cluster_6876	Pocillopora_meandrina_HIv1___Sc0000061	18663	19073	411	237	135	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	52	112	13	25	20	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:20249-20674	Cluster_6877	Pocillopora_meandrina_HIv1___Sc0000061	20249	20674	426	423	152	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	30	91	167	16	40	63	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:22467-22892	Cluster_6878	Pocillopora_meandrina_HIv1___Sc0000061	22467	22892	426	435	162	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	28	116	178	18	27	57	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:23099-23509	Cluster_6879	Pocillopora_meandrina_HIv1___Sc0000061	23099	23509	411	225	133	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	50	114	6	15	18	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:24685-25110	Cluster_6880	Pocillopora_meandrina_HIv1___Sc0000061	24685	25110	426	403	150	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	26	89	172	10	34	46	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:25314-25727	Cluster_6881	Pocillopora_meandrina_HIv1___Sc0000061	25314	25727	414	228	142	0.9956140350877193	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	48	119	8	17	21	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:26903-27328	Cluster_6882	Pocillopora_meandrina_HIv1___Sc0000061	26903	27328	426	441	170	0.0022675736961451248	-	UGGGAAUACCCCGUGUUGUAGGCUU	38	107	175	17	34	65	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:27535-27945	Cluster_6883	Pocillopora_meandrina_HIv1___Sc0000061	27535	27945	411	219	130	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	56	103	9	18	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:29121-29546	Cluster_6884	Pocillopora_meandrina_HIv1___Sc0000061	29121	29546	426	395	146	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	29	84	175	17	21	56	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:29753-30190	Cluster_6885	Pocillopora_meandrina_HIv1___Sc0000061	29753	30190	438	237	145	0.9957805907172996	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	7	69	113	10	13	23	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:31339-31763	Cluster_6886	Pocillopora_meandrina_HIv1___Sc0000061	31339	31763	425	182	91	0.005494505494505495	-	GGAAUACCCCGUGUUGUAGGCUU	15	44	73	7	10	23	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:31966-32412	Cluster_6887	Pocillopora_meandrina_HIv1___Sc0000061	31966	32412	447	231	129	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	54	115	9	13	25	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:39387-39812	Cluster_6888	Pocillopora_meandrina_HIv1___Sc0000061	39387	39812	426	379	138	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	36	90	144	13	36	60	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:40019-40429	Cluster_6889	Pocillopora_meandrina_HIv1___Sc0000061	40019	40429	411	192	108	0.9947916666666666	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	43	102	6	14	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:41604-42029	Cluster_6890	Pocillopora_meandrina_HIv1___Sc0000061	41604	42029	426	412	147	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	29	95	163	22	36	57	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:42236-42646	Cluster_6891	Pocillopora_meandrina_HIv1___Sc0000061	42236	42646	411	191	125	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	42	92	12	15	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:43822-44247	Cluster_6892	Pocillopora_meandrina_HIv1___Sc0000061	43822	44247	426	324	130	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	22	67	149	12	15	49	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:44445-44864	Cluster_6893	Pocillopora_meandrina_HIv1___Sc0000061	44445	44864	420	226	135	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	20	45	113	18	17	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:46041-46464	Cluster_6894	Pocillopora_meandrina_HIv1___Sc0000061	46041	46464	424	159	95	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	12	35	73	6	7	28	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:46673-47083	Cluster_6895	Pocillopora_meandrina_HIv1___Sc0000061	46673	47083	411	187	116	0.9946524064171123	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	32	90	14	17	24	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:54032-54457	Cluster_6896	Pocillopora_meandrina_HIv1___Sc0000061	54032	54457	426	409	159	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	24	91	175	19	24	57	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:56250-56675	Cluster_6897	Pocillopora_meandrina_HIv1___Sc0000061	56250	56675	426	431	162	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	29	91	173	17	32	74	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:56882-57292	Cluster_6898	Pocillopora_meandrina_HIv1___Sc0000061	56882	57292	411	227	141	0.9955947136563876	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	66	104	16	14	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:58468-58894	Cluster_6899	Pocillopora_meandrina_HIv1___Sc0000061	58468	58894	427	416	161	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	27	86	186	19	25	58	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:59100-59510	Cluster_6900	Pocillopora_meandrina_HIv1___Sc0000061	59100	59510	411	205	124	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	22	44	95	17	16	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:60686-61111	Cluster_6901	Pocillopora_meandrina_HIv1___Sc0000061	60686	61111	426	405	159	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	36	104	162	16	20	59	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:61309-61728	Cluster_6902	Pocillopora_meandrina_HIv1___Sc0000061	61309	61728	420	224	138	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	58	115	10	16	18	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:62904-63329	Cluster_6903	Pocillopora_meandrina_HIv1___Sc0000061	62904	63329	426	434	156	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	32	102	189	9	29	65	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:63536-63946	Cluster_6904	Pocillopora_meandrina_HIv1___Sc0000061	63536	63946	411	218	120	0.9954128440366973	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	54	92	6	21	30	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:65122-65547	Cluster_6905	Pocillopora_meandrina_HIv1___Sc0000061	65122	65547	426	337	136	0.002967359050445104	-	UGGGAAUACCCCGUGUUGUAGGCUU	21	93	134	15	16	39	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:67340-67762	Cluster_6906	Pocillopora_meandrina_HIv1___Sc0000061	67340	67762	423	142	77	0.007042253521126761	-	UGGGAAUACCCCGUGUUGUAGGCUU	10	27	59	6	13	26	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000066:51411-51837	Cluster_6907	Pocillopora_meandrina_HIv1___Sc0000066	51411	51837	427	145	62	0.9448275862068966	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	34	0	137	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000067:40407-41364	Cluster_6908	Pocillopora_meandrina_HIv1___Sc0000067	40407	41364	958	1315	233	0.9817490494296578	+	UUGAAACGUGUUGCUGAACGCUUGUUGU	365	4	1273	2	3	23	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000067:64340-64947	Cluster_6909	Pocillopora_meandrina_HIv1___Sc0000067	64340	64947	608	4573	321	0.09381150229608572	-	UCCGGUGUAAAAUAAAACAGAAGCAUU	1440	67	3787	382	35	42	260	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000069:14374-16151	Cluster_6910	Pocillopora_meandrina_HIv1___Sc0000069	14374	16151	1778	2874	1105	0.9599860821155184	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	102	23	2743	8	18	40	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:28307-29023	Cluster_6911	Pocillopora_meandrina_HIv1___Sc0000077	28307	29023	717	412	200	0.07281553398058252	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	29	5	382	3	4	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:31165-31695	Cluster_6912	Pocillopora_meandrina_HIv1___Sc0000077	31165	31695	531	571	213	0.008756567425569177	-	UCAGACGUGAACUGUGGACCAUUAUC	27	1	563	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:31816-32245	Cluster_6913	Pocillopora_meandrina_HIv1___Sc0000077	31816	32245	430	615	124	0.016260162601626018	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	133	1	605	2	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:613-1030	Cluster_6914	Pocillopora_meandrina_HIv1___Sc0000080	613	1030	418	203	103	0.019704433497536946	-	UUGUCUUGUUUCUGUUCUGACCCGAACA	19	2	198	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:11173-11595	Cluster_6915	Pocillopora_meandrina_HIv1___Sc0000080	11173	11595	423	136	42	0.5735294117647058	.	CAAGUUGUAAAUUAUGGGUCGUG	45	3	79	0	2	45	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:14588-15017	Cluster_6916	Pocillopora_meandrina_HIv1___Sc0000080	14588	15017	430	135	46	0.0	-	UCAAAACCUUGUUGGCUGUAUUCUCUCAUC	44	1	124	1	7	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000081:33329-33757	Cluster_6917	Pocillopora_meandrina_HIv1___Sc0000081	33329	33757	429	260	67	0.0	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	52	0	258	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:19971-20587	Cluster_6918	Pocillopora_meandrina_HIv1___xfSc0000000	19971	20587	617	355	126	0.9126760563380282	+	UGUACUCUUUCUAUUUUCCUUCGUUCCUGGG	51	7	335	1	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:261113-261538	Cluster_6919	Pocillopora_meandrina_HIv1___xfSc0000000	261113	261538	426	155	68	0.9935483870967742	+	GUCUUUCUUAGUACUUUCUCUGUCUUAGUG	36	21	96	4	10	8	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:369300-369822	Cluster_6920	Pocillopora_meandrina_HIv1___xfSc0000000	369300	369822	523	1838	177	0.9940152339499456	+	UGUUGGACGUUGCUGAUACGAAGUUUUC	216	18	1773	14	13	7	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:375428-375956	Cluster_6921	Pocillopora_meandrina_HIv1___xfSc0000000	375428	375956	529	751	183	0.08388814913448735	-	UUUGAUAUAAAGGUUGUGGAAAAACAGU	77	8	701	4	1	18	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:587017-587444	Cluster_6922	Pocillopora_meandrina_HIv1___xfSc0000000	587017	587444	428	136	70	0.9264705882352942	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	28	0	129	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:588528-588954	Cluster_6923	Pocillopora_meandrina_HIv1___xfSc0000000	588528	588954	427	130	68	0.8384615384615385	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	17	0	114	0	3	8	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:598004-598432	Cluster_6924	Pocillopora_meandrina_HIv1___xfSc0000000	598004	598432	429	176	38	0.005681818181818182	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	71	0	165	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:651583-652001	Cluster_6925	Pocillopora_meandrina_HIv1___xfSc0000000	651583	652001	419	121	7	0.01652892561983471	-	UUAUGUUUUGGCUUGUUUU	106	120	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:659750-660262	Cluster_6926	Pocillopora_meandrina_HIv1___xfSc0000000	659750	660262	513	384	128	0.9401041666666666	+	UAAUGCGUCUAAGUAGGCCAAGCCUUUGAUU	30	1	355	0	3	1	24	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:695933-696404	Cluster_6927	Pocillopora_meandrina_HIv1___xfSc0000000	695933	696404	472	428	180	0.9065420560747663	+	UCUGUACUAGAGCAAGAACAAGGUUUU	33	5	382	3	3	0	35	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:696415-696844	Cluster_6928	Pocillopora_meandrina_HIv1___xfSc0000000	696415	696844	430	269	139	0.929368029739777	+	UUUUCGGCUACUUCUGUCCAUUUUUGGC	21	3	258	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:814453-815105	Cluster_6929	Pocillopora_meandrina_HIv1___xfSc0000000	814453	815105	653	610	299	0.21311475409836064	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	92	9	540	11	5	12	33	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:815252-815909	Cluster_6930	Pocillopora_meandrina_HIv1___xfSc0000000	815252	815909	658	643	320	0.374805598755832	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	27	5	575	2	10	17	34	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:816129-816786	Cluster_6931	Pocillopora_meandrina_HIv1___xfSc0000000	816129	816786	658	1198	336	0.08096828046744574	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	104	11	1120	4	9	32	22	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:817024-817450	Cluster_6932	Pocillopora_meandrina_HIv1___xfSc0000000	817024	817450	427	197	112	0.13705583756345177	-	UGAGUCGAGGUUAUUCACAAUACGAGC	31	5	176	2	2	2	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1384894-1385321	Cluster_6933	Pocillopora_meandrina_HIv1___xfSc0000000	1384894	1385321	428	112	42	0.09821428571428571	-	UUAAACCGACUCACAGUCCGAUUCGAAU	41	0	107	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1437925-1438367	Cluster_6934	Pocillopora_meandrina_HIv1___xfSc0000000	1437925	1438367	443	387	204	0.8475452196382429	+	UACUCUUUCGAGUUUCGUGUUACUGUUGGG	23	10	353	1	7	6	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1596809-1597237	Cluster_6935	Pocillopora_meandrina_HIv1___xfSc0000000	1596809	1597237	429	102	20	0.7647058823529411	.	CUUCAUUCUGAUCUAUUGUUACAGUUACAAC	36	0	100	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:43913-44382	Cluster_6936	Pocillopora_meandrina_HIv1___xfSc0000001	43913	44382	470	5297	326	0.14140079290164245	-	UGAUCUGCGCAUAGGAAUUGCCCUGGAC	1971	11	5027	7	27	66	159	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:44948-45376	Cluster_6937	Pocillopora_meandrina_HIv1___xfSc0000001	44948	45376	429	240	62	0.85	+	AUGUAGAGUGUCUUUAAGGUCAAUA	36	1	193	3	0	7	36	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:45557-45985	Cluster_6938	Pocillopora_meandrina_HIv1___xfSc0000001	45557	45985	429	151	35	0.8543046357615894	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	37	1	145	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:316338-317779	Cluster_6939	Pocillopora_meandrina_HIv1___xfSc0000001	316338	317779	1442	8016	1209	0.8957085828343313	+	UGUGAAACCCCGGUCUGCCAUAACCAUGUC	729	27	7686	25	38	111	129	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:422317-422742	Cluster_6940	Pocillopora_meandrina_HIv1___xfSc0000001	422317	422742	426	246	87	0.8048780487804879	+	AUGUAGAGUGUCUUUAAGGUCAAUA	31	3	201	0	0	15	27	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:422923-423401	Cluster_6941	Pocillopora_meandrina_HIv1___xfSc0000001	422923	423401	479	344	60	0.7616279069767442	.	AUUGUUUGGAUGUGUCUGCAAAUGCAGUGC	47	0	323	0	0	10	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:433285-433793	Cluster_6942	Pocillopora_meandrina_HIv1___xfSc0000001	433285	433793	509	2383	276	0.9475451112043642	+	UGUUUCACACUUUACUACAUUCCCUGGU	655	39	2240	6	4	29	65	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:441368-441790	Cluster_6943	Pocillopora_meandrina_HIv1___xfSc0000001	441368	441790	423	101	46	0.039603960396039604	-	UACUCUCCUCUUGAGCUGCUCGGAUAUCAGC	31	2	94	1	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:611350-611768	Cluster_6944	Pocillopora_meandrina_HIv1___xfSc0000001	611350	611768	419	132	83	0.9848484848484849	+	UCUUCGUACGGUGUGCUCGCAUGACUUCAAU	10	1	126	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:614071-614497	Cluster_6945	Pocillopora_meandrina_HIv1___xfSc0000001	614071	614497	427	87	35	0.9540229885057471	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	28	0	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:655377-655787	Cluster_6946	Pocillopora_meandrina_HIv1___xfSc0000001	655377	655787	411	135	59	0.5259259259259259	.	AUUCGUUUCAAUCGGGGUUUAGACGUU	17	5	120	1	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:984696-985112	Cluster_6947	Pocillopora_meandrina_HIv1___xfSc0000001	984696	985112	417	83	31	0.927710843373494	+	CCGUGUCUUAAGAAACAAAGUUGUCAGCA	16	0	60	0	0	1	22	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1018829-1019229	Cluster_6948	Pocillopora_meandrina_HIv1___xfSc0000001	1018829	1019229	401	121	75	0.9917355371900827	+	UCUUCGUACGGUGUGCUCGCAUGACUUCAAU	10	0	119	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1019324-1019729	Cluster_6949	Pocillopora_meandrina_HIv1___xfSc0000001	1019324	1019729	406	133	69	0.9924812030075187	+	UAAUAAACUCAAAAGAUUAUAACGCGG	12	0	133	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1021546-1021972	Cluster_6950	Pocillopora_meandrina_HIv1___xfSc0000001	1021546	1021972	427	92	43	0.9347826086956522	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	26	0	87	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1062394-1062821	Cluster_6951	Pocillopora_meandrina_HIv1___xfSc0000001	1062394	1062821	428	155	63	0.41935483870967744	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	24	5	138	1	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1104054-1104463	Cluster_6952	Pocillopora_meandrina_HIv1___xfSc0000001	1104054	1104463	410	154	92	0.9675324675324676	+	UUGGCUCUUUCACUUCGAACUGAUUUUGA	13	0	149	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1106692-1108687	Cluster_6953	Pocillopora_meandrina_HIv1___xfSc0000001	1106692	1108687	1996	7937	1555	0.969509890386796	+	UACUCUUCUGUGCUGUAUUCCAUUUGC	1001	30	7621	20	40	83	143	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1108888-1109756	Cluster_6954	Pocillopora_meandrina_HIv1___xfSc0000001	1108888	1109756	869	693	331	0.9163059163059163	+	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	36	8	651	0	2	14	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1109758-1110707	Cluster_6955	Pocillopora_meandrina_HIv1___xfSc0000001	1109758	1110707	950	2289	763	0.9126256006989952	+	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	178	16	2155	9	12	28	69	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:168712-169762	Cluster_6956	Pocillopora_meandrina_HIv1___xfSc0000002	168712	169762	1051	1160	406	0.9301724137931034	+	UCCAGUCGAGUAGUGCUAAAUAAAAAUUGCU	77	3	1113	6	2	15	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:170249-170886	Cluster_6957	Pocillopora_meandrina_HIv1___xfSc0000002	170249	170886	638	750	240	0.9466666666666667	+	UGUGUCAGAACCCGGCUUGCAUAAGUGA	105	7	701	5	5	25	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:170923-171342	Cluster_6958	Pocillopora_meandrina_HIv1___xfSc0000002	170923	171342	420	236	142	0.6949152542372882	.	UAGACGAAGAAUCCAGUAAACUAACUGUGUU	20	1	212	4	2	3	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:171520-173001	Cluster_6959	Pocillopora_meandrina_HIv1___xfSc0000002	171520	173001	1482	4023	1127	0.814317673378076	+	UCACUGAAGACUCGAGUACA	151	340	3397	63	29	36	158	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:178160-178586	Cluster_6960	Pocillopora_meandrina_HIv1___xfSc0000002	178160	178586	427	152	76	0.09210526315789473	-	UUAUAAGGAUCUCAAGGCGAAAAAAGGG	43	12	131	6	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:303947-304378	Cluster_6961	Pocillopora_meandrina_HIv1___xfSc0000002	303947	304378	432	337	118	0.0	-	UUCUGUAGCAGCCGAUGUCCUGGGAGAUG	32	1	301	9	6	2	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:344012-344439	Cluster_6962	Pocillopora_meandrina_HIv1___xfSc0000002	344012	344439	428	195	98	0.8102564102564103	+	UAUGACGUCUUCAAUUUACUUUAUUUGA	27	29	145	10	1	8	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:444423-444835	Cluster_6963	Pocillopora_meandrina_HIv1___xfSc0000002	444423	444835	413	188	107	0.09574468085106383	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	36	5	174	0	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:446677-447730	Cluster_6964	Pocillopora_meandrina_HIv1___xfSc0000002	446677	447730	1054	766	346	0.7610966057441253	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	35	2	711	5	8	19	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:447991-448420	Cluster_6965	Pocillopora_meandrina_HIv1___xfSc0000002	447991	448420	430	597	204	0.9078726968174204	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	85	7	499	0	1	12	78	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:480368-480796	Cluster_6966	Pocillopora_meandrina_HIv1___xfSc0000002	480368	480796	429	284	127	0.0	-	UGCGUUCUGUCGGUGAUGUGAUUUUACCAC	54	3	276	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:482097-482525	Cluster_6967	Pocillopora_meandrina_HIv1___xfSc0000002	482097	482525	429	269	141	0.0	-	UCGGUCUGGUCGCUCUGGAUGAUGACGC	24	1	258	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:482702-483129	Cluster_6968	Pocillopora_meandrina_HIv1___xfSc0000002	482702	483129	428	347	85	0.0	-	UGGAUUGUCUUCAGUUGGGACGUGAUGC	168	1	335	0	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:483467-484031	Cluster_6969	Pocillopora_meandrina_HIv1___xfSc0000002	483467	484031	565	5272	314	0.0	-	UCUGGUCAGGCUGCAAGCAUACAACACC	3264	16	5220	3	19	4	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:497091-497514	Cluster_6970	Pocillopora_meandrina_HIv1___xfSc0000002	497091	497514	424	134	75	0.9552238805970149	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	16	1	129	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:498601-499027	Cluster_6971	Pocillopora_meandrina_HIv1___xfSc0000002	498601	499027	427	125	80	0.808	+	UGUAUUGAUUGAACUUGUCGGUUGACC	14	3	103	2	1	13	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:500363-500771	Cluster_6972	Pocillopora_meandrina_HIv1___xfSc0000002	500363	500771	409	126	77	0.873015873015873	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUU	9	0	114	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:573629-574054	Cluster_6973	Pocillopora_meandrina_HIv1___xfSc0000002	573629	574054	426	133	60	0.03759398496240601	-	UAUAAAGAUGUUCAUCGGCCCAGUGGCGUGA	23	4	126	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:574455-574867	Cluster_6974	Pocillopora_meandrina_HIv1___xfSc0000002	574455	574867	413	141	79	0.14893617021276595	-	UGCUUGUGACUUAAGUUGUCGUUCUUCU	10	1	125	1	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:575312-575715	Cluster_6975	Pocillopora_meandrina_HIv1___xfSc0000002	575312	575715	404	131	80	0.1297709923664122	-	UAAAUCUCUCGGGUCAAUACAGAUGCGUA	14	3	122	0	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:576204-576630	Cluster_6976	Pocillopora_meandrina_HIv1___xfSc0000002	576204	576630	427	150	93	0.14	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	11	2	135	3	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:576884-577284	Cluster_6977	Pocillopora_meandrina_HIv1___xfSc0000002	576884	577284	401	123	71	0.3333333333333333	.	UCGGAUACGGUUGCAAUUCCUCGCGGC	10	2	115	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:577714-578141	Cluster_6978	Pocillopora_meandrina_HIv1___xfSc0000002	577714	578141	428	131	60	0.022900763358778626	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	16	0	126	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:652776-653204	Cluster_6979	Pocillopora_meandrina_HIv1___xfSc0000002	652776	653204	429	386	48	0.0025906735751295338	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	285	1	379	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:653268-653684	Cluster_6980	Pocillopora_meandrina_HIv1___xfSc0000002	653268	653684	417	111	63	0.15315315315315314	-	UUUUGCUCUUUAUCGGGUGUCUGGACC	10	1	104	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:116596-117022	Cluster_6981	Pocillopora_meandrina_HIv1___xfSc0000003	116596	117022	427	81	25	0.9876543209876543	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	28	0	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:231720-232134	Cluster_6982	Pocillopora_meandrina_HIv1___xfSc0000003	231720	232134	415	210	118	1.0	+	UCUGUUCUGGUUCGGGGUAGAUUCCCUGGC	12	0	203	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:232473-232900	Cluster_6983	Pocillopora_meandrina_HIv1___xfSc0000003	232473	232900	428	411	116	1.0	+	UGGAUUGUCUUCAGUUGGGACGUGAUGC	149	2	403	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:233077-233724	Cluster_6984	Pocillopora_meandrina_HIv1___xfSc0000003	233077	233724	648	341	169	0.9970674486803519	+	UCGGUCUGGUCGCUCUGGAUGAUGACGC	20	1	331	2	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:234000-234676	Cluster_6985	Pocillopora_meandrina_HIv1___xfSc0000003	234000	234676	677	675	310	1.0	+	UAAGACUACGUGAAUUGGAAUUUGAGGU	30	3	646	4	1	5	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:234871-235369	Cluster_6986	Pocillopora_meandrina_HIv1___xfSc0000003	234871	235369	499	714	240	1.0	+	UGCGUGUCCUUUUCUGCUGAGUUUGGAA	85	3	689	7	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:8030-8744	Cluster_6987	Pocillopora_meandrina_HIv1___xfSc0000004	8030	8744	715	397	202	0.08060453400503778	-	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	29	8	360	3	3	7	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:10888-11418	Cluster_6988	Pocillopora_meandrina_HIv1___xfSc0000004	10888	11418	531	559	214	0.005366726296958855	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	33	3	548	1	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:11539-11969	Cluster_6989	Pocillopora_meandrina_HIv1___xfSc0000004	11539	11969	431	598	130	0.023411371237458192	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	134	0	589	3	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:42435-42862	Cluster_6990	Pocillopora_meandrina_HIv1___xfSc0000004	42435	42862	428	531	65	0.9077212806026366	+	UUGGACAAAGCAUCACUAAACAAAGUUU	332	0	508	0	0	22	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:148429-148965	Cluster_6991	Pocillopora_meandrina_HIv1___xfSc0000004	148429	148965	537	615	112	0.014634146341463415	-	GAUAUUGUCAGACAAGAUGCCAAACUGAA	81	13	579	0	8	4	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:149661-150070	Cluster_6992	Pocillopora_meandrina_HIv1___xfSc0000004	149661	150070	410	79	9	0.8354430379746836	+	UAAGCUUUCGUCCAUGUUAUCACUU	41	0	79	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:199831-200258	Cluster_6993	Pocillopora_meandrina_HIv1___xfSc0000004	199831	200258	428	98	27	0.9693877551020408	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	35	0	97	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:204461-204976	Cluster_6994	Pocillopora_meandrina_HIv1___xfSc0000004	204461	204976	516	653	76	0.6952526799387443	.	UUGGACAAAGCAUCACUAAACAAAGUUU	296	4	632	0	0	16	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:227067-227495	Cluster_6995	Pocillopora_meandrina_HIv1___xfSc0000004	227067	227495	429	88	37	0.9886363636363636	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	30	0	87	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:261818-262245	Cluster_6996	Pocillopora_meandrina_HIv1___xfSc0000004	261818	262245	428	494	62	0.937246963562753	+	UUGGACAAAGCAUCACUAAACAAAGUUU	283	0	471	1	2	20	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:263030-263439	Cluster_6997	Pocillopora_meandrina_HIv1___xfSc0000004	263030	263439	410	79	6	0.810126582278481	+	UAAGCUUUCGUCCAUGUUAUCACUU	49	0	78	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:332329-333223	Cluster_6998	Pocillopora_meandrina_HIv1___xfSc0000004	332329	333223	895	570	278	0.13157894736842105	-	UGUGAGUUAUGUGACCCUGAACAGC	27	37	471	14	17	15	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:334450-334777	Cluster_6999	Pocillopora_meandrina_HIv1___xfSc0000004	334450	334777	328	326	112	0.012269938650306749	-	UGCUUCUUUCUCGAUUUGUGAGAACUUCUUC	29	1	319	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:78009-78425	Cluster_7000	Pocillopora_meandrina_HIv1___xfSc0000006	78009	78425	417	122	77	0.819672131147541	+	UGAGUAAAUGCUGUAAAGUCUAGGACC	7	1	111	0	4	2	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:78981-79720	Cluster_7001	Pocillopora_meandrina_HIv1___xfSc0000006	78981	79720	740	324	152	0.9475308641975309	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	66	5	307	1	0	3	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:79803-80211	Cluster_7002	Pocillopora_meandrina_HIv1___xfSc0000006	79803	80211	409	182	107	0.6373626373626373	.	ACUGGAUACAAAACUGCUCGAUGC	22	1	132	3	3	9	34	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:105567-106030	Cluster_7003	Pocillopora_meandrina_HIv1___xfSc0000006	105567	106030	464	1433	192	0.09630146545708304	-	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUA	220	15	1234	54	13	30	87	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:37985-38400	Cluster_7004	Pocillopora_meandrina_HIv1___xfSc0000007	37985	38400	416	227	110	0.920704845814978	+	UAAGAUUUACACACUGAUCGACCAUGU	24	1	216	1	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:38630-39054	Cluster_7005	Pocillopora_meandrina_HIv1___xfSc0000007	38630	39054	425	249	131	0.927710843373494	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	22	1	230	0	2	5	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:39376-39855	Cluster_7006	Pocillopora_meandrina_HIv1___xfSc0000007	39376	39855	480	338	141	0.9467455621301775	+	UCCAAUCACACACAGUUCUCCUGCGGC	75	3	317	0	3	4	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:39939-40366	Cluster_7007	Pocillopora_meandrina_HIv1___xfSc0000007	39939	40366	428	122	42	0.9262295081967213	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	55	2	115	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:40383-40958	Cluster_7008	Pocillopora_meandrina_HIv1___xfSc0000007	40383	40958	576	1270	419	0.9031496062992126	+	UCUCAUGUUGGUACUGCUCACUCGCUG	113	64	1088	14	5	53	46	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:41231-42507	Cluster_7009	Pocillopora_meandrina_HIv1___xfSc0000007	41231	42507	1277	1355	542	0.9254612546125461	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	108	14	1280	6	4	20	31	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:77076-77505	Cluster_7010	Pocillopora_meandrina_HIv1___xfSc0000007	77076	77505	430	115	31	1.0	+	AUUGCAAGCAAACGGCUCGGAGUCUUUUUC	69	11	91	8	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:81664-82093	Cluster_7011	Pocillopora_meandrina_HIv1___xfSc0000007	81664	82093	430	284	47	1.0	+	AUUGCAAGCCUUCUUCGUGCAAGCCUGACC	150	8	275	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:125491-126431	Cluster_7012	Pocillopora_meandrina_HIv1___xfSc0000007	125491	126431	941	2916	571	0.06412894375857339	-	UAUUUGAUCUGUCUACCUCUUUAAAGGA	280	24	2778	12	10	9	83	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:140904-141332	Cluster_7013	Pocillopora_meandrina_HIv1___xfSc0000007	140904	141332	429	215	63	0.06511627906976744	-	UGCAUUGUAAUCGGGAUAGACCUAUUGA	63	6	189	8	1	7	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:248543-248972	Cluster_7014	Pocillopora_meandrina_HIv1___xfSc0000007	248543	248972	430	1809	68	1.0	+	AUUGCAAGCAAACGGCUAGGAGUCUUCUU	1265	2	1803	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000012:38929-39359	Cluster_7015	Pocillopora_meandrina_HIv1___xfSc0000012	38929	39359	431	245	80	0.9877551020408163	+	UUGAAUACUUUAAUGACAACGAUGAAAC	58	1	239	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000012:147097-147519	Cluster_7016	Pocillopora_meandrina_HIv1___xfSc0000012	147097	147519	423	209	109	0.5023923444976076	.	UGGUAAAUGAAGGUUCCUGGAGGCAUGAC	14	9	154	5	6	21	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:13538-14068	Cluster_7017	Pocillopora_meandrina_HIv1___xfSc0000017	13538	14068	531	580	189	0.9879310344827587	+	UGCUCAUAUCUAAUAGGACAACUGCCGUC	62	1	564	1	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:39350-39877	Cluster_7018	Pocillopora_meandrina_HIv1___xfSc0000017	39350	39877	528	36646	1725	0.0003820335097964307	-	UGGGAAUACCCCGUGUUGUAGGCUU	3005	7185	17695	1215	2125	4464	3962	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:42217-43151	Cluster_7019	Pocillopora_meandrina_HIv1___xfSc0000017	42217	43151	935	1645	664	0.9963525835866262	+	UGUGGGUAACUCGAGCGUAUAA	94	513	493	208	202	133	96	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:43800-44315	Cluster_7020	Pocillopora_meandrina_HIv1___xfSc0000017	43800	44315	516	6579	1529	0.005471956224350205	-	AGUUAAGCCCUGUCGGGCGGGGUUAGUACUU	225	1917	3302	456	316	292	296	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:44827-45388	Cluster_7021	Pocillopora_meandrina_HIv1___xfSc0000017	44827	45388	562	1838	463	0.9983677910772579	+	CGUUCGCGCUCGUCCCCGC	176	739	506	149	219	127	98	N	N	miR-9415_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___xfSc0000017:46013-46438	Cluster_7022	Pocillopora_meandrina_HIv1___xfSc0000017	46013	46438	426	260	130	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	17	67	115	11	17	31	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:47103-47608	Cluster_7023	Pocillopora_meandrina_HIv1___xfSc0000017	47103	47608	506	8614	1572	0.9990712793127466	+	CAUUGCACUUCGACUGGGUUGACC	228	1746	3982	627	683	812	764	N	N	miR-9415_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___xfSc0000017:48236-48652	Cluster_7024	Pocillopora_meandrina_HIv1___xfSc0000017	48236	48652	417	84	54	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	6	26	31	2	4	12	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:50458-50978	Cluster_7025	Pocillopora_meandrina_HIv1___xfSc0000017	50458	50978	521	4314	936	0.0037088548910523874	-	UGGGAAUACCCCGUGUUGUAGGCUU	193	1092	2016	219	262	415	310	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:51490-52056	Cluster_7026	Pocillopora_meandrina_HIv1___xfSc0000017	51490	52056	567	14447	1306	0.9995846888627397	+	CGUUCGCGCUCGUCCCCGC	2896	8786	1755	1258	1598	677	373	N	N	miR-9415_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___xfSc0000017:52682-53105	Cluster_7027	Pocillopora_meandrina_HIv1___xfSc0000017	52682	53105	424	157	88	0.0	-	GGGAAUACCCCGUGUUGUAGGCUU	9	45	56	10	10	17	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:54904-55405	Cluster_7028	Pocillopora_meandrina_HIv1___xfSc0000017	54904	55405	502	1640	341	0.0	-	ACCCCGUGUUGUAGGCUU	119	550	596	60	114	153	167	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:55533-55946	Cluster_7029	Pocillopora_meandrina_HIv1___xfSc0000017	55533	55946	414	153	86	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	31	93	4	8	12	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:57122-57547	Cluster_7030	Pocillopora_meandrina_HIv1___xfSc0000017	57122	57547	426	297	118	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	24	60	133	15	14	42	33	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:57761-58164	Cluster_7031	Pocillopora_meandrina_HIv1___xfSc0000017	57761	58164	404	159	109	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	39	81	13	9	14	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:59339-59762	Cluster_7032	Pocillopora_meandrina_HIv1___xfSc0000017	59339	59762	424	145	69	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	11	29	69	4	10	20	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:59972-60382	Cluster_7033	Pocillopora_meandrina_HIv1___xfSc0000017	59972	60382	411	157	98	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	40	82	4	8	8	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:61559-61983	Cluster_7034	Pocillopora_meandrina_HIv1___xfSc0000017	61559	61983	425	230	119	0.004347826086956522	-	GGAAUACCCCGUGUUGUAGGCUU	22	44	102	13	11	35	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:62191-62601	Cluster_7035	Pocillopora_meandrina_HIv1___xfSc0000017	62191	62601	411	177	101	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	17	35	83	14	17	20	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:62613-63038	Cluster_7036	Pocillopora_meandrina_HIv1___xfSc0000017	62613	63038	426	262	166	0.9961832061068703	+	AUACUUACCUGACGCGGG	15	76	92	27	24	28	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:63779-64204	Cluster_7037	Pocillopora_meandrina_HIv1___xfSc0000017	63779	64204	426	461	158	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	35	105	211	12	31	60	42	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:65997-66423	Cluster_7038	Pocillopora_meandrina_HIv1___xfSc0000017	65997	66423	427	412	175	0.0024271844660194173	-	GGAAUACCCCGUGUUGUAGGCUU	23	99	172	18	32	50	41	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:66629-67039	Cluster_7039	Pocillopora_meandrina_HIv1___xfSc0000017	66629	67039	411	214	124	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	51	92	7	27	17	20	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:68215-68640	Cluster_7040	Pocillopora_meandrina_HIv1___xfSc0000017	68215	68640	426	332	128	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	30	78	138	11	17	56	32	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:68847-69809	Cluster_7041	Pocillopora_meandrina_HIv1___xfSc0000017	68847	69809	963	1451	641	0.9965541006202618	+	CGUUCGCGCUCGUCCCCGC	99	454	495	112	166	119	105	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:70434-70860	Cluster_7042	Pocillopora_meandrina_HIv1___xfSc0000017	70434	70860	427	438	153	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	33	98	201	18	29	56	36	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:71066-71476	Cluster_7043	Pocillopora_meandrina_HIv1___xfSc0000017	71066	71476	411	189	109	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	54	94	5	11	13	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:72652-73077	Cluster_7044	Pocillopora_meandrina_HIv1___xfSc0000017	72652	73077	426	414	160	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	33	94	178	12	26	67	37	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:73284-73694	Cluster_7045	Pocillopora_meandrina_HIv1___xfSc0000017	73284	73694	411	216	131	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	52	91	16	22	20	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:74870-75296	Cluster_7046	Pocillopora_meandrina_HIv1___xfSc0000017	74870	75296	427	380	156	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	26	95	154	14	24	52	41	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:75502-75912	Cluster_7047	Pocillopora_meandrina_HIv1___xfSc0000017	75502	75912	411	220	124	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	47	100	15	21	18	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:77088-77512	Cluster_7048	Pocillopora_meandrina_HIv1___xfSc0000017	77088	77512	425	282	135	0.0035460992907801418	-	UGGGAAUACCCCGUGUUGUAGGCUU	22	68	118	8	18	45	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:77720-78130	Cluster_7049	Pocillopora_meandrina_HIv1___xfSc0000017	77720	78130	411	211	134	0.985781990521327	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	45	104	12	20	17	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:79307-79732	Cluster_7050	Pocillopora_meandrina_HIv1___xfSc0000017	79307	79732	426	434	147	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	33	99	192	11	37	59	36	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:79939-80375	Cluster_7051	Pocillopora_meandrina_HIv1___xfSc0000017	79939	80375	437	212	131	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	44	104	14	12	19	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:81525-81951	Cluster_7052	Pocillopora_meandrina_HIv1___xfSc0000017	81525	81951	427	446	175	0.002242152466367713	-	GGAAUACCCCGUGUUGUAGGCUU	31	94	182	16	35	75	44	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:82157-82567	Cluster_7053	Pocillopora_meandrina_HIv1___xfSc0000017	82157	82567	411	200	110	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	46	105	11	14	10	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:83743-84169	Cluster_7054	Pocillopora_meandrina_HIv1___xfSc0000017	83743	84169	427	401	151	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	24	80	188	15	30	47	41	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:84375-84785	Cluster_7055	Pocillopora_meandrina_HIv1___xfSc0000017	84375	84785	411	200	120	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	9	44	91	19	16	18	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:85961-86386	Cluster_7056	Pocillopora_meandrina_HIv1___xfSc0000017	85961	86386	426	324	138	0.0030864197530864196	-	UGGGAAUACCCCGUGUUGUAGGCUU	22	80	133	17	27	38	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:86593-87035	Cluster_7057	Pocillopora_meandrina_HIv1___xfSc0000017	86593	87035	443	238	140	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	60	110	12	17	23	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:88179-88697	Cluster_7058	Pocillopora_meandrina_HIv1___xfSc0000017	88179	88697	519	4560	846	0.0017543859649122807	-	UGGGAAUACCCCGUGUUGUAGGCUU	287	855	2180	156	379	492	498	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:88804-89223	Cluster_7059	Pocillopora_meandrina_HIv1___xfSc0000017	88804	89223	420	164	106	0.9939024390243902	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	42	96	4	10	4	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:89225-89774	Cluster_7060	Pocillopora_meandrina_HIv1___xfSc0000017	89225	89774	550	1272	488	1.0	+	CGUUCGCGCUCGUCCCCA	44	318	513	117	118	114	92	N	N	miR-9415_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___xfSc0000017:90404-90827	Cluster_7061	Pocillopora_meandrina_HIv1___xfSc0000017	90404	90827	424	131	62	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	11	33	58	4	4	15	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:91034-91444	Cluster_7062	Pocillopora_meandrina_HIv1___xfSc0000017	91034	91444	411	159	95	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	18	32	80	7	13	13	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:92620-93041	Cluster_7063	Pocillopora_meandrina_HIv1___xfSc0000017	92620	93041	422	106	60	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	9	28	40	2	4	18	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:93255-93658	Cluster_7064	Pocillopora_meandrina_HIv1___xfSc0000017	93255	93658	404	138	87	0.9927536231884058	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	30	75	5	9	6	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:95462-95881	Cluster_7065	Pocillopora_meandrina_HIv1___xfSc0000017	95462	95881	420	163	106	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	35	91	11	5	8	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:97055-97573	Cluster_7066	Pocillopora_meandrina_HIv1___xfSc0000017	97055	97573	519	6176	670	0.0006476683937823834	-	GGAAUACCCCGUGUUGUAGGCUU	916	2649	425	426	797	1706	173	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:97674-98247	Cluster_7067	Pocillopora_meandrina_HIv1___xfSc0000017	97674	98247	574	8324	986	0.9992791926958193	+	CAAGUGUAGUAUCUGUUCU	554	2312	4099	215	640	713	345	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000021:6767-7195	Cluster_7068	Pocillopora_meandrina_HIv1___xfSc0000021	6767	7195	429	178	45	0.028089887640449437	-	AAUGGGAAAACGAGAACAGCGUGAGUGU	35	1	147	2	1	7	20	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000021:7791-8219	Cluster_7069	Pocillopora_meandrina_HIv1___xfSc0000021	7791	8219	429	2095	100	0.00954653937947494	-	UGAAACUCUGAUCUGAAAAUAUUUUUA	1225	5	2082	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000058:8405-8834	Cluster_7070	Pocillopora_meandrina_HIv1___xfSc0000058	8405	8834	430	340	145	0.05588235294117647	-	UGUUCUUGUAGUCUUUUAACAGCUUGUU	29	0	329	1	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000058:9997-10445	Cluster_7071	Pocillopora_meandrina_HIv1___xfSc0000058	9997	10445	449	339	142	0.11209439528023599	-	UACAGCCGAUAUGGAAGCAUUUAAUUC	29	2	317	0	3	7	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000059:13828-14262	Cluster_7072	Pocillopora_meandrina_HIv1___xfSc0000059	13828	14262	435	300	104	1.0	+	UGUACUCUGCCGAUAGCUUGCGAUUUUCAUC	48	1	293	0	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000146:258-1373	Cluster_7073	Pocillopora_meandrina_HIv1___xfSc0000146	258	1373	1116	4695	850	0.8766773162939298	+	UACUUUCUGAUUGACUUGGAGUGUGGGG	890	59	4138	14	26	151	307	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000146:25018-25637	Cluster_7074	Pocillopora_meandrina_HIv1___xfSc0000146	25018	25637	620	782	168	0.35294117647058826	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	129	1	607	4	8	131	31	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:3126-3572	Cluster_7075	Pocillopora_meandrina_HIv1___xfSc0000168	3126	3572	447	330	155	0.14545454545454545	-	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	51	7	284	3	8	5	23	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:3831-4338	Cluster_7076	Pocillopora_meandrina_HIv1___xfSc0000168	3831	4338	508	659	286	0.054628224582701064	-	UCUUCUUUGGACUGUUUUUUGCAUAAAGGA	35	3	624	2	6	10	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:6572-7264	Cluster_7077	Pocillopora_meandrina_HIv1___xfSc0000168	6572	7264	693	822	252	0.0170316301703163	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	203	1	806	0	4	4	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:7670-8095	Cluster_7078	Pocillopora_meandrina_HIv1___xfSc0000168	7670	8095	426	160	72	0.11875	-	UCACUUUCCUGGCUGUCCAUGUUGAC	38	1	147	2	1	7	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:15157-15584	Cluster_7079	Pocillopora_meandrina_HIv1___xfSc0000168	15157	15584	428	180	85	0.005555555555555556	-	UGUACUUCUCUGACCACUCUAGUUCAGGA	45	7	164	4	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:15951-16965	Cluster_7080	Pocillopora_meandrina_HIv1___xfSc0000168	15951	16965	1015	1075	390	0.0018604651162790699	-	UGGGAAUUGUAACAAAAAGUGUUAGUGUG	46	13	1030	5	2	14	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:17735-18328	Cluster_7081	Pocillopora_meandrina_HIv1___xfSc0000168	17735	18328	594	408	191	0.0	-	UUGGCUGAUCUUCUUUAUUAUAUGUGAGU	39	2	401	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:21430-22809	Cluster_7082	Pocillopora_meandrina_HIv1___xfSc0000168	21430	22809	1380	1423	509	0.18271257905832747	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	95	37	1293	9	5	25	54	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:22923-23332	Cluster_7083	Pocillopora_meandrina_HIv1___xfSc0000168	22923	23332	410	87	35	0.11494252873563218	-	UACGUGUAGACUGAGCCAUUGCCUAGU	29	0	68	2	1	0	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:31977-32817	Cluster_7084	Pocillopora_meandrina_HIv1___xfSc0000168	31977	32817	841	1222	368	0.15875613747954173	-	UAAACUACUAACGGCUUUUGACAAUGCUUU	111	15	1118	2	13	32	42	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000175:30110-30936	Cluster_7085	Pocillopora_meandrina_HIv1___xfSc0000175	30110	30936	827	398	115	0.9798994974874372	+	UAGGACAACUGAGAAUCCACGUAGACUC	89	0	385	1	6	0	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000206:12940-13422	Cluster_7086	Pocillopora_meandrina_HIv1___xfSc0000206	12940	13422	483	15968	190	0.9948021042084169	+	UACCAAGGUCUUGUAGUCUAGUACAACU	6071	16	15835	4	51	11	51	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000212:2286-2714	Cluster_7087	Pocillopora_meandrina_HIv1___xfSc0000212	2286	2714	429	203	101	0.8817733990147784	+	UGACUUAUAACAGCGACUUUGCACUUUUA	36	7	190	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:18834-19448	Cluster_7088	Pocillopora_meandrina_HIv1___xfSc0000217	18834	19448	615	596	156	0.9093959731543624	+	UGACUGUCGGUCAACUGUCGGCC	51	13	455	3	10	56	59	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:24561-24987	Cluster_7089	Pocillopora_meandrina_HIv1___xfSc0000217	24561	24987	427	160	42	1.0	+	ACAGAUCGGAUCACAGAUCAUGUGAGC	44	26	132	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:27133-27697	Cluster_7090	Pocillopora_meandrina_HIv1___xfSc0000217	27133	27697	565	201	68	0.009950248756218905	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	26	1	200	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:33134-33560	Cluster_7091	Pocillopora_meandrina_HIv1___xfSc0000217	33134	33560	427	146	67	0.0821917808219178	-	UGAUCUGAUUUUACUCGUUGUAGAUAA	16	2	137	0	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:33610-34458	Cluster_7092	Pocillopora_meandrina_HIv1___xfSc0000217	33610	34458	849	747	359	0.05756358768406961	-	UGAUCUGGUUUGAGUCUUGUAUUAGAAC	25	5	716	2	2	9	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:34509-34927	Cluster_7093	Pocillopora_meandrina_HIv1___xfSc0000217	34509	34927	419	74	29	0.0	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	16	1	72	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000228:24353-24856	Cluster_7094	Pocillopora_meandrina_HIv1___xfSc0000228	24353	24856	504	596	313	0.31208053691275167	.	UGAUCUACAGCUCUUAGGAUGUCAUUUGA	59	38	500	9	14	13	22	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000237:9779-10472	Cluster_7095	Pocillopora_meandrina_HIv1___xfSc0000237	9779	10472	694	1780	446	0.0005617977528089888	-	GUUAGUGAUGAUGAAGUAAAAGGUCUGAUGU	376	211	1252	79	64	82	92	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000262:25212-25643	Cluster_7096	Pocillopora_meandrina_HIv1___xfSc0000262	25212	25643	432	382	84	0.9267015706806283	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	68	1	381	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000264:2370-2797	Cluster_7097	Pocillopora_meandrina_HIv1___xfSc0000264	2370	2797	428	95	40	1.0	+	AAAGAAACGAAUCGGUUUAAACUCACAUU	24	5	82	2	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000264:26323-26751	Cluster_7098	Pocillopora_meandrina_HIv1___xfSc0000264	26323	26751	429	149	41	0.18791946308724833	-	UGUAUCUUCAGAGGACUUCAGGUCGCUCA	57	2	138	3	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000275:3122-3552	Cluster_7099	Pocillopora_meandrina_HIv1___xfSc0000275	3122	3552	431	136	48	0.014705882352941176	-	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	55	2	133	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000284:20495-20921	Cluster_7100	Pocillopora_meandrina_HIv1___xfSc0000284	20495	20921	427	146	46	0.07534246575342465	-	UAGGACUAACAUCUCGACUUCUUA	23	1	117	0	0	0	28	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:8410-9028	Cluster_7101	Pocillopora_meandrina_HIv1___xfSc0000343	8410	9028	619	456	155	0.8048245614035088	+	UGAAUGUUGCGAAGCUCUUCGUCCAAAAGA	123	11	407	9	3	15	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:9872-10368	Cluster_7102	Pocillopora_meandrina_HIv1___xfSc0000343	9872	10368	497	971	216	0.44490216271884653	.	AUUCAUGUUAGGUGGUAGAGGUGU	143	53	487	13	73	111	234	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:11558-12139	Cluster_7103	Pocillopora_meandrina_HIv1___xfSc0000343	11558	12139	582	2444	455	0.820785597381342	+	UUUCCGUUGCAUUAGAGGACUUCUUGUU	731	50	2242	33	12	32	75	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:78-509	Cluster_7104	Pocillopora_meandrina_HIv1___xfSc0000376	78	509	432	601	79	0.9983361064891847	+	UAUAAUAACUGUUGGUUUCCUGGACAAUC	124	2	579	5	3	2	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:1159-1588	Cluster_7105	Pocillopora_meandrina_HIv1___xfSc0000376	1159	1588	430	138	56	1.0	+	UGCUCUUAAGGAGUCGUCCGAUUUUGAAUU	20	3	134	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:1629-2225	Cluster_7106	Pocillopora_meandrina_HIv1___xfSc0000376	1629	2225	597	645	169	0.9767441860465116	+	UAUGUCGUGUGUGCACUUUGGUGACUGC	85	7	607	5	3	10	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:3024-3453	Cluster_7107	Pocillopora_meandrina_HIv1___xfSc0000376	3024	3453	430	1032	68	1.0	+	UGCGAAACCGCGUGUAAAUUCUCUACUAUU	488	0	1024	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:11926-12345	Cluster_7108	Pocillopora_meandrina_HIv1___xfSc0000376	11926	12345	420	131	81	1.0	+	UUUCCUUUCUUUUGUACUUGUCGGACGUGA	15	3	123	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:13856-14561	Cluster_7109	Pocillopora_meandrina_HIv1___xfSc0000376	13856	14561	706	203	66	1.0	+	UGAAACGGUCAAUCUCCUUGAAAUCUGGGA	54	0	200	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:14913-15442	Cluster_7110	Pocillopora_meandrina_HIv1___xfSc0000376	14913	15442	530	497	145	0.23340040241448692	.	CAGUAUCACAAGAUGGGAAUGAGG	53	4	272	28	11	68	114	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:21858-22264	Cluster_7111	Pocillopora_meandrina_HIv1___xfSc0000376	21858	22264	407	101	41	0.9207920792079208	+	UGUGCAAGCACCAAGUUGAAUGAGAGC	16	1	92	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:23488-24614	Cluster_7112	Pocillopora_meandrina_HIv1___xfSc0000376	23488	24614	1127	553	207	0.5045207956600362	.	AUCUUUCCGAGGCUCUGAGUGGG	44	4	349	17	15	101	67	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:28123-28554	Cluster_7113	Pocillopora_meandrina_HIv1___xfSc0000376	28123	28554	432	310	105	0.9516129032258065	+	UACGUGUAGAAAGCCUUCUCUGACAUC	25	1	292	4	3	7	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:28774-29193	Cluster_7114	Pocillopora_meandrina_HIv1___xfSc0000376	28774	29193	420	136	61	0.9779411764705882	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	21	3	129	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:29864-30464	Cluster_7115	Pocillopora_meandrina_HIv1___xfSc0000376	29864	30464	601	695	348	0.9093525179856116	+	UAAUGAAGUCGUAAUUUGUCCAUCC	85	8	649	4	12	13	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:33482-33911	Cluster_7116	Pocillopora_meandrina_HIv1___xfSc0000376	33482	33911	430	709	206	0.9830747531734838	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	190	0	691	1	3	8	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:35966-36401	Cluster_7117	Pocillopora_meandrina_HIv1___xfSc0000376	35966	36401	436	238	102	0.9369747899159664	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	33	1	219	0	1	14	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:41523-41955	Cluster_7118	Pocillopora_meandrina_HIv1___xfSc0000376	41523	41955	433	395	155	0.9341772151898734	+	UGUUUUGGUGUGUUCAAGUAUCUUUGA	26	1	386	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:45892-46320	Cluster_7119	Pocillopora_meandrina_HIv1___xfSc0000376	45892	46320	429	84	27	1.0	+	UCAAAUCUGUACCAGUGCCACUCAGCAUC	49	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000423:29248-29694	Cluster_7120	Pocillopora_meandrina_HIv1___xfSc0000423	29248	29694	447	1698	243	0.07479387514723204	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCU	151	9	1497	13	38	112	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000423:30170-30595	Cluster_7121	Pocillopora_meandrina_HIv1___xfSc0000423	30170	30595	426	98	38	0.09183673469387756	-	UACGUGUAGACUGAGCCAUUGCCUAGU	27	1	87	2	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000423:34008-34430	Cluster_7122	Pocillopora_meandrina_HIv1___xfSc0000423	34008	34430	423	142	63	0.056338028169014086	-	UAACACAAUGAACCAAGGCACGUCCAGA	16	6	121	0	2	10	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000436:26683-27108	Cluster_7123	Pocillopora_meandrina_HIv1___xfSc0000436	26683	27108	426	161	59	0.0	-	UUUGAUUGACGUACGGUAUUUGAGACGC	20	1	153	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000436:42973-43542	Cluster_7124	Pocillopora_meandrina_HIv1___xfSc0000436	42973	43542	570	792	142	0.9886363636363636	+	UAGACAUGACAUCAGCCUCUGAGCCAACUC	271	4	782	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:3977-4490	Cluster_7125	Pocillopora_meandrina_HIv1___xfSc0000445	3977	4490	514	1314	337	0.1400304414003044	-	UGAUCCGCUCCCAUUCGAACUUUAGGC	127	5	1192	6	14	38	59	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:21289-22084	Cluster_7126	Pocillopora_meandrina_HIv1___xfSc0000445	21289	22084	796	403	196	0.13647642679900746	-	UGUUCCUGAACUUCGCGCGAAAACUCGA	39	1	369	1	3	10	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:22475-22901	Cluster_7127	Pocillopora_meandrina_HIv1___xfSc0000445	22475	22901	427	194	97	0.19072164948453607	-	UGAACAAGGAAACACCAAAUAAUAUCUC	18	3	172	2	0	6	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:1-800	Cluster_7128	Pocillopora_meandrina_HIv1___xfSc0000477	1	800	800	669	319	0.08520179372197309	-	UGAUCUAAAUUUAACAAUCUUGCCUUUU	58	8	617	7	4	6	27	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:844-1421	Cluster_7129	Pocillopora_meandrina_HIv1___xfSc0000477	844	1421	578	3256	557	0.013513513513513514	-	UGUGAUAUUCCGAACACUUGAAUGAGUCA	205	13	3077	11	15	33	107	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:1796-2238	Cluster_7130	Pocillopora_meandrina_HIv1___xfSc0000477	1796	2238	443	1562	230	0.02560819462227913	-	UUCGAUCUAUACCAUCUGGAGGCUAAUU	306	3	1537	3	2	2	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:15549-15966	Cluster_7131	Pocillopora_meandrina_HIv1___xfSc0000477	15549	15966	418	78	27	0.01282051282051282	-	UUGAGUGACAUGGGAAUGAAUUAGUCAGA	20	3	63	0	6	0	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:20269-20696	Cluster_7132	Pocillopora_meandrina_HIv1___xfSc0000477	20269	20696	428	82	22	0.08536585365853659	-	GAAGAACUCAUUAACCGGCUCCGUAAAG	35	2	80	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:39655-40079	Cluster_7133	Pocillopora_meandrina_HIv1___xfSc0000540	39655	40079	425	278	62	0.07553956834532374	-	AUGGACAGAACACAGGAAGUGCU	64	6	101	6	8	130	27	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:41358-41786	Cluster_7134	Pocillopora_meandrina_HIv1___xfSc0000540	41358	41786	429	157	46	0.9872611464968153	+	UAAGAUAUCGUUAACAACUCGAAGAAGCA	32	1	155	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:10286-10856	Cluster_7135	Pocillopora_meandrina_HIv1___xfSc0000555	10286	10856	571	2743	275	0.999635435654393	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	682	1	2728	0	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:20847-21271	Cluster_7136	Pocillopora_meandrina_HIv1___xfSc0000555	20847	21271	425	166	72	0.9698795180722891	+	UUUCCUAUUUUCAGUUAAAAACUCUUAU	15	0	164	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:21513-21935	Cluster_7137	Pocillopora_meandrina_HIv1___xfSc0000555	21513	21935	423	224	83	0.9821428571428571	+	UGUCAUGUCAACGUCUGGUUGGAACCAUC	40	1	221	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:22028-22721	Cluster_7138	Pocillopora_meandrina_HIv1___xfSc0000555	22028	22721	694	757	307	0.9128137384412153	+	UAUGAUUGAAUUGACUCGUGGUAGCUAUU	27	12	707	1	4	13	20	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:22903-23332	Cluster_7139	Pocillopora_meandrina_HIv1___xfSc0000555	22903	23332	430	196	75	0.9744897959183674	+	UUGGAGAUGAUCUUUGCGAUGACAUUGUG	40	4	184	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:34374-34813	Cluster_7140	Pocillopora_meandrina_HIv1___xfSc0000555	34374	34813	440	2470	323	0.9748987854251012	+	UAAUUUAUCCAUGUAUUCUUGAAGACGU	316	8	2403	3	4	28	24	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:35795-36771	Cluster_7141	Pocillopora_meandrina_HIv1___xfSc0000555	35795	36771	977	699	332	0.9155937052932761	+	UUCGAUCUUUUCUGUGUAAUGUGUAGC	31	12	648	5	4	7	23	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:39714-40144	Cluster_7142	Pocillopora_meandrina_HIv1___xfSc0000555	39714	40144	431	557	181	0.0718132854578097	-	UAACGUAGUGGUAUCCAUUGAACAAGUUC	85	6	479	5	2	8	57	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:40403-41452	Cluster_7143	Pocillopora_meandrina_HIv1___xfSc0000555	40403	41452	1050	967	409	0.27197518097207857	.	ACGUAUUGCAAGCUUGAAAUUAACCACA	49	10	895	12	5	27	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000566:34959-35386	Cluster_7144	Pocillopora_meandrina_HIv1___xfSc0000566	34959	35386	428	139	34	0.9928057553956835	+	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	30	1	136	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:366-1215	Cluster_7145	Pocillopora_meandrina_HIv1___xfSc0000567	366	1215	850	363	170	0.11570247933884298	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	50	8	324	5	3	10	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:6059-8283	Cluster_7146	Pocillopora_meandrina_HIv1___xfSc0000567	6059	8283	2225	21400	2515	0.9717289719626169	+	UCCGAGACUGUAGAUCCGAGUUGAUCCA	3281	108	20544	100	123	183	342	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:8785-9268	Cluster_7147	Pocillopora_meandrina_HIv1___xfSc0000567	8785	9268	484	395	171	0.9493670886075949	+	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	31	2	386	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:9273-10551	Cluster_7148	Pocillopora_meandrina_HIv1___xfSc0000567	9273	10551	1279	1812	828	0.8250551876379691	+	UGUAACGGAACAGACUCCAAUAUACA	46	27	1574	19	27	42	123	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:25703-26133	Cluster_7149	Pocillopora_meandrina_HIv1___xfSc0000567	25703	26133	431	147	43	1.0	+	UGCAUGAUCUGUCUAAGCUAAGGAAACGAGC	42	0	146	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:42864-43305	Cluster_7150	Pocillopora_meandrina_HIv1___xfSc0000567	42864	43305	442	456	161	0.9978070175438597	+	UGCUUUCUGUUCUCUUGUUCUCCAACAAA	61	1	447	1	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000570:34339-34766	Cluster_7151	Pocillopora_meandrina_HIv1___xfSc0000570	34339	34766	428	115	29	1.0	+	UGAACUACUGCUCGUACUCUAGAUGACA	21	0	115	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:18000-18419	Cluster_7152	Pocillopora_meandrina_HIv1___xfSc0000579	18000	18419	420	317	209	0.9558359621451105	+	UCAGACACGUGGAUACUUGCGAUGAAGU	15	0	302	0	3	3	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:18777-19203	Cluster_7153	Pocillopora_meandrina_HIv1___xfSc0000579	18777	19203	427	228	120	0.9210526315789473	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	17	0	213	1	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:19932-20358	Cluster_7154	Pocillopora_meandrina_HIv1___xfSc0000579	19932	20358	427	160	61	0.7375	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	26	0	136	0	3	2	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:27709-28811	Cluster_7155	Pocillopora_meandrina_HIv1___xfSc0000583	27709	28811	1103	1062	358	0.060263653483992465	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	101	6	1001	5	5	14	31	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:29246-30468	Cluster_7156	Pocillopora_meandrina_HIv1___xfSc0000583	29246	30468	1223	2019	479	0.1896978702327885	-	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	510	14	1900	5	10	22	68	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:31468-32249	Cluster_7157	Pocillopora_meandrina_HIv1___xfSc0000583	31468	32249	782	338	132	0.1893491124260355	-	UAUACUCCAAAGGUUCUGAAAACGAAUG	36	2	279	3	9	27	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:33456-33885	Cluster_7158	Pocillopora_meandrina_HIv1___xfSc0000583	33456	33885	430	1050	110	0.017142857142857144	-	UAACUUCAACUAGAUCGAAAUACUCGUGA	650	23	996	5	4	15	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000596:34954-35845	Cluster_7159	Pocillopora_meandrina_HIv1___xfSc0000596	34954	35845	892	1652	482	0.8765133171912833	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	201	8	1546	10	19	39	30	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:1-6639	Cluster_7160	Pocillopora_meandrina_HIv1___xfSc0000616	1	6639	6639	7095589	132787	0.0002419813210714431	-	CUCGGGCUGAGACUUGAAGCG	1477082	1060968	2307243	1884783	595369	466429	780797	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:9553-15450	Cluster_7161	Pocillopora_meandrina_HIv1___xfSc0000616	9553	15450	5898	5981615	112611	0.00010281504242583316	-	CUCGGGCUGAGACUUGAAGCG	1475128	841685	1593318	1848647	549640	420449	727876	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:24459-24889	Cluster_7162	Pocillopora_meandrina_HIv1___xfSc0000616	24459	24889	431	10897	364	0.9998164632467652	+	GGGGGUAUAGCUCAGUGGUAGA	3883	1398	3833	626	4423	182	435	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000621:37651-38093	Cluster_7163	Pocillopora_meandrina_HIv1___xfSc0000621	37651	38093	443	236	112	0.8940677966101694	+	UCCGUCUAUCUCCGCUCGAACCUUUGGAU	24	2	200	2	5	1	26	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000655:10705-11254	Cluster_7164	Pocillopora_meandrina_HIv1___xfSc0000655	10705	11254	550	366	135	0.7158469945355191	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	63	15	325	2	14	7	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000655:14051-14479	Cluster_7165	Pocillopora_meandrina_HIv1___xfSc0000655	14051	14479	429	156	46	0.0	-	UCUGGAAGCAUUAUCUGCCGGUCUGCCUG	47	4	145	4	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:7790-8388	Cluster_7166	Pocillopora_meandrina_HIv1___xfSc0000704	7790	8388	599	319	88	0.8119122257053292	+	UGGAAUCAUGCCUUGCAUCUGUUAUAAC	90	0	283	1	2	22	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:8925-9753	Cluster_7167	Pocillopora_meandrina_HIv1___xfSc0000704	8925	9753	829	672	243	0.5044642857142857	.	UAUAUGGAGUCGUUCUCUGCUGAAGAUG	61	19	518	40	1	22	72	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:21986-22444	Cluster_7168	Pocillopora_meandrina_HIv1___xfSc0000704	21986	22444	459	263	153	0.11406844106463879	-	UUCGUCGAACUUCUUCAGGACUUGUGA	12	0	252	2	2	5	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:22891-23317	Cluster_7169	Pocillopora_meandrina_HIv1___xfSc0000704	22891	23317	427	136	77	0.19852941176470587	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	16	2	117	5	0	7	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:25875-26481	Cluster_7170	Pocillopora_meandrina_HIv1___xfSc0000704	25875	26481	607	528	80	0.9810606060606061	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	113	2	508	1	1	5	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:26497-27293	Cluster_7171	Pocillopora_meandrina_HIv1___xfSc0000704	26497	27293	797	277	110	0.9747292418772563	+	UGCUUUAGUCACAGACUUUGCACCUGAAA	29	14	258	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:28347-28835	Cluster_7172	Pocillopora_meandrina_HIv1___xfSc0000704	28347	28835	489	5044	442	0.9674861221252974	+	UAUGUUGAACGAGAACUGAGGACCUCGAUC	869	16	4831	14	40	77	66	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000705:276-695	Cluster_7173	Pocillopora_meandrina_HIv1___xfSc0000705	276	695	420	187	15	0.0	-	GUGAAAGGCUAAACAAACUU	56	171	0	10	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000705:30667-31330	Cluster_7174	Pocillopora_meandrina_HIv1___xfSc0000705	30667	31330	664	557	101	0.8994614003590664	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	303	1	538	0	0	4	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000716:16771-17199	Cluster_7175	Pocillopora_meandrina_HIv1___xfSc0000716	16771	17199	429	266	73	0.9736842105263158	+	AUCUUCUGAAUCAAGAAAAAAGAGGCUGG	98	0	264	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000760:22912-23336	Cluster_7176	Pocillopora_meandrina_HIv1___xfSc0000760	22912	23336	425	82	14	0.04878048780487805	-	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	57	0	81	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000765:14969-15396	Cluster_7177	Pocillopora_meandrina_HIv1___xfSc0000765	14969	15396	428	128	25	0.0	-	AAAUCAAACAUAUCGCGGCAAGGGUGGA	63	6	114	0	2	6	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000811:4425-4855	Cluster_7178	Pocillopora_meandrina_HIv1___xfSc0000811	4425	4855	431	1622	96	1.0	+	UUGGAAUUCGAAGCAAGUAACAAUUGACAGG	563	0	1620	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000812:24713-25141	Cluster_7179	Pocillopora_meandrina_HIv1___xfSc0000812	24713	25141	429	404	51	0.0049504950495049506	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	297	2	399	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000824:3688-4115	Cluster_7180	Pocillopora_meandrina_HIv1___xfSc0000824	3688	4115	428	92	40	0.0	-	ACGAAAAUAGUAGAAUGAAGUCAGAAGC	14	0	87	1	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000824:11828-13068	Cluster_7181	Pocillopora_meandrina_HIv1___xfSc0000824	11828	13068	1241	13439	1135	0.01607262445122405	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2337	49	13126	19	74	70	101	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:18635-19900	Cluster_7182	Pocillopora_meandrina_HIv1___xfSc0000836	18635	19900	1266	26119	2665	0.8343351583138712	+	UGAUGAAUUCACAUGUUGACGAACACUUGA	3461	308	22574	214	568	862	1593	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:31963-33875	Cluster_7183	Pocillopora_meandrina_HIv1___xfSc0000836	31963	33875	1913	5432	1419	0.9331737849779087	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	495	25	5195	10	16	55	131	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:34471-35000	Cluster_7184	Pocillopora_meandrina_HIv1___xfSc0000836	34471	35000	530	247	111	0.9676113360323887	+	UGCUUUACAUUUUGCCUCUGACGAAGAACA	19	3	222	2	4	6	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:1884-2309	Cluster_7185	Pocillopora_meandrina_HIv1___xfSc0000840	1884	2309	426	159	65	0.7484276729559748	.	AUUGAUUCUAUUUUGUACGGCCUAGU	44	14	127	7	7	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:7618-8047	Cluster_7186	Pocillopora_meandrina_HIv1___xfSc0000840	7618	8047	430	1295	54	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUG	1056	0	1295	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:28786-29215	Cluster_7187	Pocillopora_meandrina_HIv1___xfSc0000840	28786	29215	430	240	80	0.6083333333333333	.	UUUCAGAUUUUGCUUUUUACGACGAGUU	33	2	221	0	0	4	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:31255-31871	Cluster_7188	Pocillopora_meandrina_HIv1___xfSc0000868	31255	31871	617	626	188	0.9568690095846646	+	UUCAGUUACGCUUUCGCUCUAAUAGUUGUU	140	7	598	0	0	7	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:32924-34952	Cluster_7189	Pocillopora_meandrina_HIv1___xfSc0000868	32924	34952	2029	3717	1181	0.8614474038202852	+	UGUAAAAUCUGGCAUCCUAUUGGAUAAC	179	45	3342	19	30	154	127	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:35232-35930	Cluster_7190	Pocillopora_meandrina_HIv1___xfSc0000868	35232	35930	699	565	215	0.9221238938053097	+	UGUGUCAGAACCCGGCUUGCAUAAGUGA	116	4	519	3	7	28	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:35955-36357	Cluster_7191	Pocillopora_meandrina_HIv1___xfSc0000868	35955	36357	403	176	68	0.9659090909090909	+	UGUUAAGUUUGAUGUUCCGCUCUCUGCGUC	14	1	172	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:36592-36831	Cluster_7192	Pocillopora_meandrina_HIv1___xfSc0000868	36592	36831	240	1312	66	0.9809451219512195	+	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	1179	2	1293	1	0	4	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000886:1768-2194	Cluster_7193	Pocillopora_meandrina_HIv1___xfSc0000886	1768	2194	427	177	103	0.3615819209039548	.	UGUGACACUUUGAGACACUCGUGAGACA	19	0	157	3	1	5	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000890:8258-8889	Cluster_7194	Pocillopora_meandrina_HIv1___xfSc0000890	8258	8889	632	4347	448	0.05037957211870255	-	UUUGAUCUUGAAAUUAUGAUACCUGGAA	1772	4	4274	7	4	37	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000892:18825-19245	Cluster_7195	Pocillopora_meandrina_HIv1___xfSc0000892	18825	19245	421	92	30	0.0	-	CUUGAAUCGUUUGGACUGCGCCA	27	7	1	11	24	41	8	23	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:14310-14737	Cluster_7196	Pocillopora_meandrina_HIv1___xfSc0000953	14310	14737	428	150	30	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	53	5	143	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:24299-24710	Cluster_7197	Pocillopora_meandrina_HIv1___xfSc0000953	24299	24710	412	206	112	0.3737864077669903	.	ACUGGAUACAAAACUGCUCGAUGC	28	4	147	0	1	7	47	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:24784-25527	Cluster_7198	Pocillopora_meandrina_HIv1___xfSc0000953	24784	25527	744	329	130	0.04559270516717325	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	59	4	311	0	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:30618-31037	Cluster_7199	Pocillopora_meandrina_HIv1___xfSc0000953	30618	31037	420	86	29	1.0	+	UCCUCGGUAGUAUAGUGGUAAGUAUCCC	24	20	66	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:2509-3192	Cluster_7200	Pocillopora_meandrina_HIv1___xfSc0000968	2509	3192	684	307	148	0.742671009771987	.	UGUGUGCAUUUAUUCCCCUUUCUGAAAU	24	2	248	2	3	19	33	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:3207-3635	Cluster_7201	Pocillopora_meandrina_HIv1___xfSc0000968	3207	3635	429	210	50	0.05238095238095238	-	AUCUUUCCGAGGCUCUGAGUGGG	49	3	86	11	21	73	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:7136-7575	Cluster_7202	Pocillopora_meandrina_HIv1___xfSc0000968	7136	7575	440	317	116	0.917981072555205	+	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	29	0	299	0	3	6	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:7795-8214	Cluster_7203	Pocillopora_meandrina_HIv1___xfSc0000968	7795	8214	420	133	66	0.9699248120300752	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	27	2	126	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:8885-9439	Cluster_7204	Pocillopora_meandrina_HIv1___xfSc0000968	8885	9439	555	625	278	0.9056	+	UAAUGAAGUCGUAAUUUGUCCAUCC	88	4	583	0	11	12	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:12503-12933	Cluster_7205	Pocillopora_meandrina_HIv1___xfSc0000968	12503	12933	431	664	173	0.983433734939759	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	177	0	649	0	3	8	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:13274-13701	Cluster_7206	Pocillopora_meandrina_HIv1___xfSc0000968	13274	13701	428	162	96	0.9135802469135802	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	20	0	151	2	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:14987-15422	Cluster_7207	Pocillopora_meandrina_HIv1___xfSc0000968	14987	15422	436	240	98	0.9375	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	42	0	220	0	2	13	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:20544-20975	Cluster_7208	Pocillopora_meandrina_HIv1___xfSc0000968	20544	20975	432	381	143	0.9291338582677166	+	UGUUUUGGUGUGUUCAAGUAUCUUUGA	32	1	372	1	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:24909-25337	Cluster_7209	Pocillopora_meandrina_HIv1___xfSc0000968	24909	25337	429	94	27	1.0	+	UCAAAUCUGUACCAGUGCCACUCAGCAUC	51	1	92	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:31116-31529	Cluster_7210	Pocillopora_meandrina_HIv1___xfSc0000968	31116	31529	414	112	52	1.0	+	UAGUCGACUUUGUGCAACCCGAGUAA	19	0	105	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:14537-14993	Cluster_7211	Pocillopora_meandrina_HIv1___xfSc0000974	14537	14993	457	271	74	0.014760147601476014	-	UGGGCCAUGGUGGAUAGUUGAUAUUCUUC	66	3	259	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:16539-16968	Cluster_7212	Pocillopora_meandrina_HIv1___xfSc0000974	16539	16968	430	116	47	0.9913793103448276	+	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	27	0	116	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:17063-17815	Cluster_7213	Pocillopora_meandrina_HIv1___xfSc0000974	17063	17815	753	630	270	1.0	+	UGCUGUACUCGACGCCAACGUUUCUUGG	29	4	615	2	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:18214-19444	Cluster_7214	Pocillopora_meandrina_HIv1___xfSc0000974	18214	19444	1231	782	287	1.0	+	UUGGACUGUGCAGCCUUAAUCAGGAACAAC	129	4	759	5	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000975:5701-6132	Cluster_7215	Pocillopora_meandrina_HIv1___xfSc0000975	5701	6132	432	3107	108	0.000643707756678468	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2230	8	3091	1	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001011:6233-6661	Cluster_7216	Pocillopora_meandrina_HIv1___xfSc0001011	6233	6661	429	354	43	1.0	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	269	0	349	1	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:12363-12917	Cluster_7217	Pocillopora_meandrina_HIv1___xfSc0001179	12363	12917	555	188	82	0.06382978723404255	-	UGUGGUUACGCCCUUCAAGUGAGAAAACUGA	25	3	177	4	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:14603-15030	Cluster_7218	Pocillopora_meandrina_HIv1___xfSc0001179	14603	15030	428	145	43	0.0	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	36	1	142	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:15669-16097	Cluster_7219	Pocillopora_meandrina_HIv1___xfSc0001179	15669	16097	429	349	154	0.12893982808022922	-	UGCGAUUUCGUUCCUCGUCCUUGAUGAUG	38	1	309	0	3	11	25	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001276:11651-12113	Cluster_7220	Pocillopora_meandrina_HIv1___xpSc0001276	11651	12113	463	2706	69	0.03399852180339985	-	UGAUUUGUUGCUGCCCUCUUGCUGC	1128	6	2641	3	2	11	43	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001280:16194-17090	Cluster_7221	Pocillopora_meandrina_HIv1___xpSc0001280	16194	17090	897	1598	217	0.9618272841051314	+	UGAGACAGUACACACGAUUUGAUAUA	194	14	1560	7	3	3	11	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001281:28694-29156	Cluster_7222	Pocillopora_meandrina_HIv1___xpSc0001281	28694	29156	463	20761	696	0.9917634025335966	+	UGAAUGCUGGUAUCUUGAUAGUAGAACA	11971	35	20471	15	49	147	44	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001344:2542-3535	Cluster_7223	Pocillopora_meandrina_HIv1___xpSc0001344	2542	3535	994	12859	796	0.016719807138968815	-	UUUGUAGGCUCUAACAGUACAUUGUU	4450	176	12448	19	33	58	125	N	N	NA