Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2-Pmea-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000014:9365459-9365552 minus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2-Pmea-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_4138.ps
Locus Name: Cluster_4138
GUUGGAUUUCCAGAAGUCAUAGCAUUGUUACUUAUUUGGAAGAUUUGUGUUCCAGAUUUGUAUCAUUGUUAUGACUUAUGGAGCAAAUCCUGAC
...(((((((((.(((((((((((.((.(((..((((((((........))))))))..))).)).))))))))))).))))...))))).... (-38.50)
....................AGCAUUGUUACUUAUUUGGAAGA................................................... len:23 al:53
....................AGCAUUGUUACUUAUUUGGAAGAUUa................................................ len:26 al:1
....................AGCAUUGUUACUUAUUUGu....................................................... len:19 al:1
....................AGCAUUGUUACUUAUUUGGu...................................................... len:20 al:2
....................AGCAUUGUUACUUAUUUGGAAG.................................................... len:22 al:4
....................AGCAUUGUUACUUAUUUGGA...................................................... len:20 al:40
....................AGCAUUGUUACUUAUUUGGg...................................................... len:20 al:1
....................AGCAUUGUUACUUAUUUGGc...................................................... len:20 al:3
....................AGCAUUGUUACUUAUUUGGAAGAUUUGU.............................................. len:28 al:1
....................AGCAUUGUUACUUAUUcGGAAGA................................................... len:23 al:1
....................AGCAUUGUUACcUAUUUGGA...................................................... len:20 al:2
....................AGCAUUGUUACUUAUUUGGAAGg................................................... len:23 al:2
....................AaCAUUGUUACUUAUUUGGAAGA................................................... len:23 al:1
.....................GCAUUGUUACUUAUUUGGAAG.................................................... len:21 al:1
.....................GCAUcGUUACUUAUUUGGA...................................................... len:19 al:1
.....................GCAUUGUUACUUAUUUGGAAGu................................................... len:22 al:1
.....................GCAUUGUUACUUAUUUGGAgGA................................................... len:22 al:1
.....................GCAUUGUUACUUAUUUGGA...................................................... len:19 al:9
.....................GCAUUGUUACUUAUUUGGg...................................................... len:19 al:2
.....................GCAUUGUUACUUAUUUGGAAGA................................................... len:22 al:16
................................UAUUUGGAAGAUUUGUGUUCa......................................... len:21 al:2
...........................................UUUGUGUUCCAGAUUUGUAUCAUUGUUAc...................... len:29 al:1
...........................................UUUGUGUUCCAGAUUUGUAUCAUUGUUA....................... len:28 al:1
...........................................UUUGUGUUaCAGAUUUGU................................. len:18 al:1
...........................................UUUGUGUUCCAGAUUUGUAUCAUUGUUAU...................... len:29 al:7
................................................aUUCCAGAUUUGUAUCAUUGUUAU...................... len:24 al:1
.................................................aUCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:21
.................................................UUCCAGAUUUGUAUCAUUGUUuU...................... len:23 al:11
.................................................UUCCAGAUUUGUAUCAcUGUUAU...................... len:23 al:14
.................................................UUCCAGAUUUGUAUgAUUGUUAU...................... len:23 al:2
.................................................UUCCcGAUUUGUAUCAUUGUUAU...................... len:23 al:2
.................................................UUCuAGAUUUGUAUCAUUGUUAU...................... len:23 al:4
.................................................UUCCAGAUUUGUAUCcUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUcAU...................... len:23 al:16
.................................................gUCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUgUGUAUCAUUGUUAU...................... len:23 al:3
.................................................UUCCAGAUUUGUAUCAUUa.......................... len:19 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUAUG..................... len:24 al:3
.................................................UUCCAGAUUUGUAUCAUUGUcA....................... len:22 al:2
.................................................UUCCAGAUUUGUAUCAUUGUa........................ len:21 al:4
.................................................UUCCAGAUUUGUAUCAUUcUUAU...................... len:23 al:1
.................................................UUCCAGuUUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAaUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAcUUGUAUCAUUGUUAU...................... len:23 al:20
.................................................UUCCAGAUUUGUAUCAUUGUg........................ len:21 al:6
.................................................UaCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:4
.................................................UUCCAGAUUUGUAUCAUUGUUAUc..................... len:24 al:55
.................................................UUCCAGAUUUGUAgCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUAg...................... len:23 al:153
.................................................UUCCAGAUUUGUAUCAUUGUUAUa..................... len:24 al:89
.................................................UUCCAGAUUUGUAUCAUUGUUAUuA.................... len:25 al:2
.................................................UUCCAGAUUUGUAUCAUUGcUAU...................... len:23 al:98
.................................................UUCCAGAUUUGUAUCAUUGUUu....................... len:22 al:4
.................................................UUCCAGAUUUGUAUCAUUGgUAU...................... len:23 al:2
.................................................UUCCAGgUUUGUAUCAUUGUUAU...................... len:23 al:16
.................................................UUCCAGAUUUGcAUCAUUGUUAU...................... len:23 al:13
.................................................UUuCAGAUUUGUAUCAUUGUUAU...................... len:23 al:4
.................................................UUCCAGAUUUGUAUCAUUGcU........................ len:21 al:2
.................................................UUCCAGAUcUGUAUCAUUGUUAU...................... len:23 al:18
.................................................UUCCAGAUUUGUAUCAUUGUU........................ len:21 al:94
.................................................UUCCAGAUUUGUAUaAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUAUGu.................... len:25 al:1
.................................................UUCCAGAUUUGUAUuAUUGUUAU...................... len:23 al:30
.................................................UUCCAGAUUUGgAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:7555
.................................................UUCCAGAUUUGUAUCgUUGUUAU...................... len:23 al:19
.................................................UUCCAGAUUUGUAUCAUUGUUAa...................... len:23 al:220
.................................................cUCCAGAUUUGUAUCAUUGUU........................ len:21 al:3
.................................................UUCCAGAUUUGUAUCAUUGUUc....................... len:22 al:3
.................................................UUCCAGAUUUGUAUCAUUGUUAUaA.................... len:25 al:1
.................................................cUCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:94
.................................................UUCCAGAUUUGUAUCAUUGaU........................ len:21 al:1
.................................................UUCCAGAUUUGUAUCAUUGgU........................ len:21 al:3
.................................................UUCCgGAUUUGUAUCAUUGUUAU...................... len:23 al:30
.................................................UUCCAGAUUUGUAUCAUUGUc........................ len:21 al:26
.................................................UUCCAGAUUUGUAcCAUUGUUAU...................... len:23 al:24
.................................................UUCCAGAUUUGUAUCAUUGUUcU...................... len:23 al:3
.................................................UUCCAGAUUUGUgUCAUUGUUAU...................... len:23 al:15
.................................................UUCCAGAUUUGUAUCAUUGc......................... len:20 al:5
.................................................UUCCAGAUUUGUcUCAUUGUUAU...................... len:23 al:2
.................................................UUCCAGAUUUGUAUCAUUGUUAUu..................... len:24 al:252
.................................................UUCCAGAUUUGUAaCAUUGUUAU...................... len:23 al:5
.................................................UUCCAGAUUUGUAUCAUgGUUAU...................... len:23 al:3
.................................................UUCCAGAUUaGUAUCAUUGUUAU...................... len:23 al:2
.................................................UUCCAGAUUUGUAUCAUUGUUAaG..................... len:24 al:1
.................................................UUCCAGAUUUGUAUCAUUaUUAU...................... len:23 al:2
.................................................UUCCuGAUUUGUAUCAUUGUUAU...................... len:23 al:5
.................................................UUCCAGAUUUaUAUCAUUGU......................... len:20 al:1
.................................................UUCCAGAUUcGUAUCAUUGUUAU...................... len:23 al:21
.................................................UUCCAGAUUUGUuUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUgU...................... len:23 al:185
.................................................UUCCAGAUUUGUAUCAUUGg......................... len:20 al:1
.................................................UUCCAGAUUUcUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUcGUUAU...................... len:23 al:12
.................................................UUCCAGAUUUaUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGU......................... len:20 al:12
.................................................UUCCAGAUaUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUAc...................... len:23 al:1452
.................................................UUCCAGAUUUGaAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUaAU...................... len:23 al:1
.................................................UUCCAGAUUgGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUaCAGAUUUGUAUCAUUGUUAU...................... len:23 al:4
.................................................UUCCAGAUUUGUAUCAUaGUUAU...................... len:23 al:1
.................................................UUCCAaAUUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UcCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:34
.................................................UUCCAGAUUUGUAUCAUUGUUA....................... len:22 al:16
..................................................UCCAGAUUUGUAUCAUUGUUAa...................... len:22 al:6
..................................................UCCAGAUUUGUAUCAUUGUUAUc..................... len:23 al:1
..................................................cCCAGAUUUGUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCAuAUUUGUAUCAUUGUUAU...................... len:22 al:1
..................................................UuCAGAUUUGUAUCAUUGUUAU...................... len:22 al:2
..................................................UCCAGAUUUGUAUCAUUGUUAg...................... len:22 al:2
..................................................UCCAGAUUUGUAcCAUUGUUAU...................... len:22 al:1
..................................................UCaAGAUUUGUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCAGAUUUuUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCAGAUUcGUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCgGAUUUGUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCAGAUUUGUAUCAUUGUUgU...................... len:22 al:3
..................................................UCCAGAUUUGUAUCgUUGUU........................ len:20 al:1
..................................................UCCAGAUUUGUAUCAUUGUUAUa..................... len:23 al:2
..................................................UCCAGAUUUGUAUCAUUGUUAU...................... len:22 al:142
..................................................UCCAGAUUUGUAUCAUUGUUAUu..................... len:23 al:11
..................................................UCCAGAUUUGUAUCAUUGUUAc...................... len:22 al:31
....................................................CAGAUUUGUAUCAUUGUUAU...................... len:20 al:1
.............................................................AUCAUUGUUAUGACUUAUGGA............ len:21 al:1
................................................................AUUGUUAUGACUUAUGGAGaA......... len:21 al:1