Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2-Pmea-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000009:3894900-3894992 minus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2-Pmea-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_2973.ps
Locus Name: Cluster_2973
ACAAAGCCGGUUUGACCGAAUAGCAUAACAUUGUAAGAGAUCUUUAAGAGCUCUUGCAUUGUUGUGCUGUUCGGGAAAGCUUAAUCAACAGCG
........(((((..(((((((((((((((.((((((((.(((...))).)))))))).)))))))))))))))..)))))............ (-43.00)
....................UAGCAUAACAUUGUAAGAGAUCUc................................................. len:24 al:2
....................UAGCAUAACAUUGUAAGAGAgC................................................... len:22 al:1
....................UAGCAUAACAUUGUAAG........................................................ len:17 al:330
....................UAGCAUAACAUcGUAAG........................................................ len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUCc.................................................. len:23 al:2
....................UAGCAUAACAUUGUAAGAGAUCa.................................................. len:23 al:25
....................UAGCAUAuCAUUGUAAG........................................................ len:17 al:1
....................cAGCAUAACAUUGUAAG........................................................ len:17 al:3
....................UAGCAUAACAUUGUAAGAuAUC................................................... len:22 al:1
....................UAGCAUAACAUUGUAcG........................................................ len:17 al:1
....................UgGCAUAACAUUGUAAG........................................................ len:17 al:2
....................UAGCAUAACAUUGUAAGAGAUCU.................................................. len:23 al:17
....................UAGCAUAACuUUGUAAG........................................................ len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUa................................................... len:22 al:11
....................UAGCAUAACAUUGUAAGAGA..................................................... len:20 al:4
....................UAGCAUAACAUUGUAAGAGAUC................................................... len:22 al:4
....................UAGCAUAACAUUGUAAGAGgUC................................................... len:22 al:4
....................UAGCAUAACAUUGUAAGAGAaC................................................... len:22 al:6
....................UAGCAUAACAUUGUAAGAGAcC................................................... len:22 al:1
....................UAGCAUAACAUUGUAgG........................................................ len:17 al:2
....................UAaCAUAACAUUGUAAG........................................................ len:17 al:1
....................UAGCAUAACAUUGUAAGAGAUu................................................... len:22 al:8
....................UAGCAUAACAUUGUAAGgGAUC................................................... len:22 al:2
....................UAGCAUAACAUUGUAAGAa...................................................... len:19 al:1
....................UAuCAUAACAUUGUAAG........................................................ len:17 al:1
....................UAGCAUAACAUUGUAAGAGAU.................................................... len:21 al:1
....................UAGCAUAACAUUGUAAGAaAUC................................................... len:22 al:2
....................UAGCAUAACAUUGUAAGAGAUCUUUAu.............................................. len:27 al:2
.......................................AUCUUUAuGAGCUCUUGC.................................... len:18 al:1
........................................UCUUUAuGAGCUCUUGCAUUGUUGUGCUGUU...................... len:31 al:1
.........................................CUUUAuGAGCUCUUGCAU.................................. len:18 al:1
..........................................UUUAuGAGCUCUUGCAUUGUUGUGCUGUU...................... len:29 al:3
..............................................uGAGCUCUUGCAUUGUUGUGCUGUU...................... len:25 al:1
.................................................GCUCUUGCAUUGUUGUGCUG........................ len:20 al:1
.................................................GCUCUUGCAUUGUUuUGCUGUU...................... len:22 al:2
.................................................GCUCUUGCAUUGUUGUGCUGUU...................... len:22 al:79
.................................................GCUCUUGCAUUGUUGUGCUGgU...................... len:22 al:4
.................................................GCUCUUGCAUUGUUGUGCUGaU...................... len:22 al:2
.................................................GCUCUUGCAUUGUUGUGCUGUc...................... len:22 al:24
.................................................GaUCUUGCAUUGUUGUGCUGUU...................... len:22 al:1
.................................................uCUCUUGCAUUGUUGUGCUGUU...................... len:22 al:2
.................................................aCUCUUGCAUUGUUGUGCUGUU...................... len:22 al:3
.................................................GCUCUUGCAUUGUUGUGCUGUa...................... len:22 al:9
.................................................GCUCUUGCAUUGUUGUGCUGcU...................... len:22 al:2
.................................................GCUCUUGCAUUGUUGUaCUGUU...................... len:22 al:1
.................................................GCUCUUGCAUUGUUGUGCUGUUa..................... len:23 al:1
.................................................GCUCUUGCAUUGUUGUGCUGU....................... len:21 al:2