Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2-Pmea-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000005:601572-601666 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2-Pmea-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_1798.ps
Locus Name: Cluster_1798
UAUUCUUGGGAUACUCGUCUCUGCCACUCGUAUUUUCUUUCACGUUUAUCGAUGAAAGAAGUACAAGUGGUAGGGAGGGGGUGUCACCAAUUCGC
.....(((((((((((.(((((((((((.((((((.((((((((.....)).)))))))))))).)))))))))))..))))))).))))..... (-45.00)
aAUUCUUGGGAUACUCGUCU........................................................................... len:20 al:1
UAUUCUUGGGAcACUCGUC............................................................................ len:19 al:1
UAUUCUUGGGAUACUCGUaU........................................................................... len:20 al:1
UgUUCUUGGGAUACUCGUCU........................................................................... len:20 al:42
UAUUCUUGGGAUACUCGUCc........................................................................... len:20 al:14
UAUUCUUGGaAUACUCGUCU........................................................................... len:20 al:1
UAUUCUUGGGAUACUCGUCU........................................................................... len:20 al:71
UAUUCUUGGGAUACUCGUCa........................................................................... len:20 al:21
UAUUCUUGGGAUACUCGUCg........................................................................... len:20 al:13
.AUUCUUGGGAUACUCGUCa........................................................................... len:19 al:23
.AUUCUUGGGAUACUCGUCc........................................................................... len:19 al:21
.AUUCUUGGGAUACUCGUCU........................................................................... len:19 al:42
.AcUCUUGGGAUACUCGUCU........................................................................... len:19 al:1
.AUUCUUGGGAUACUCGUuU........................................................................... len:19 al:2
.AUUCUUGGGAUACUCGUC............................................................................ len:18 al:1
.AUUCUUGGGAUACUCGUaU........................................................................... len:19 al:1
.gUUCUUGGGAUACUCGUCU........................................................................... len:19 al:24
.AUUCUUGGGAUACUCGUCg........................................................................... len:19 al:12
..UUCUUGGGAUACUCGUCa........................................................................... len:18 al:3
..cUCUUGGGAUACUCGUCU........................................................................... len:18 al:1
..UUCUUGGGAUACUCGUCc........................................................................... len:18 al:2
..UUCUUGGGAUACUCGUCU........................................................................... len:18 al:13
..UUCUUGGGAUACUCGUCg........................................................................... len:18 al:1
.............CUCGUCUCUGCCACUCGUAUUUUCa......................................................... len:25 al:1
...................UCUGCCACUCGUAUUUUCUUUCg..................................................... len:23 al:1
...................UCUGCCACUCGUAUUUUCUUUC...................................................... len:22 al:10
...................UCUGCCACUCGUAUUUcCUUUCA..................................................... len:23 al:1
...................UCUGCCACUCGUAUUUUCUUg....................................................... len:21 al:1
...................cCUGCCACUCGUAUUUUCUUUC...................................................... len:22 al:1
...................UCUGCCACUCGUAUUUUCUUUCA..................................................... len:23 al:7
....................CUGCCACUCGUAUUUUCUaU....................................................... len:20 al:1
....................CUGCCACUCGUAUUUUCUUcCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUUUCg..................................................... len:22 al:23
....................CcGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:7
....................uUGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:5
....................CUGCCACUCGUAUUUUCUUa....................................................... len:20 al:2
....................CUGCCACUCGUAUUUUCUUUCu..................................................... len:22 al:34
....................CUGCCACUCGUAUUUUCUUUCc..................................................... len:22 al:7
....................CUGuCACUCGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:992
....................CUGCCACcCGUAUUUUCUUUC...................................................... len:21 al:1
....................gUGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUUU....................................................... len:20 al:16
....................CUGCCACUCGUAUUUUCUUgCA..................................................... len:22 al:1
....................CaGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:5
....................aUGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUuGUAUUUUCUUUC...................................................... len:21 al:1
....................CUGCCACUCGUAUUUUCUUUC...................................................... len:21 al:200
....................CUGCCACUCGUAUUUUCUa........................................................ len:19 al:1
....................CUGCCACUCGUAUUUcCUUUCA..................................................... len:22 al:1
....................CUGCCACcCGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUcUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUaGUAUUUUCUUUC...................................................... len:21 al:2
....................CUGCuACUCGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUUUUCUUaC...................................................... len:21 al:1
....................CUGCCACUCGUAUUUUCUUc....................................................... len:20 al:7
....................CUGCCACgCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUU........................................................ len:19 al:4
....................CUGCCACUCGUAUcUUCUUUC...................................................... len:21 al:2
....................CUGCCACUCGcAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCuCUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUcUCUUUCA..................................................... len:22 al:3
....................CUGCCACUCGUAUUUUCU......................................................... len:18 al:6
....................CUGCCACUCaUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCAuUCGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCcUAUUUUCU......................................................... len:18 al:1
....................CUGCCACUCGUAUUUUCUc........................................................ len:19 al:1
....................CUGCCACUCGUAUUUUCcUUC...................................................... len:21 al:1
....................CUGCCgCUCGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUUUUCUUUu...................................................... len:21 al:5
....................CUGuCACUCGUAUUUUCUUUC...................................................... len:21 al:2
....................CUGCCACUCGUAUUcUCUUUC...................................................... len:21 al:2
....................CgGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUUUCACGUUUAUCG............................................ len:31 al:1
....................uUGCCACUCGUAUUUUCUUUC...................................................... len:21 al:3
....................CUGCCACUCGUAUUUUCcUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAgUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUUUUCUUUa...................................................... len:21 al:13
.....................UGCCACUCGUAUUUUCUUU....................................................... len:19 al:1
.....................UGCCACUCGUAUUUUCUUUC...................................................... len:20 al:6
.....................UGCCACUCGUAUUUUCUUUCA..................................................... len:21 al:2
...................................................AUGAAAGAAGUACAAGUGGc........................ len:20 al:1
....................................................UcAAAGAAGUACAAGUGGUAGG..................... len:22 al:1
....................................................UcAAAGAAGUACAAGUGGUAGGG.................... len:23 al:1
....................................................UGAAAGAAGUACAAuUGGUAGGG.................... len:23 al:1
.....................................................cAAAGAAGUACAAGUGGUAGGG.................... len:22 al:7
.....................................................aAAAGAAGUACAAGUGGUAGGG.................... len:22 al:3
.....................................................GAAAGAAGUACAAGUGGU........................ len:18 al:1
.....................................................cAAAGAAGUACAAGUGGUAGG..................... len:21 al:8
.....................................................cAAAGAAGUACAAGUGGUAG...................... len:20 al:6
.....................................................aAAAGAAGUACAAGUGGUAGGGA................... len:23 al:1
.....................................................GAAAGAAGUACAAGUGGUAG...................... len:20 al:2
.....................................................aAAAGAAGUACAAGUGGUAGG..................... len:21 al:1
......................................................AAAGAAGUAaAAGUGGUAGGG.................... len:21 al:5
......................................................AAAGAAGUACAAGUGGUAuGG.................... len:21 al:16
......................................................AAAGAAGUACAAGUGGcAGGG.................... len:21 al:82
......................................................AAAGAAGUACgAGUGGUAG...................... len:19 al:87
......................................................AAAGAAGUACAAGUGGUAGGGu................... len:22 al:12696
......................................................AAAGAAGUACAAGUGGUAaGG.................... len:21 al:41
......................................................AgAGAAGUACAAGUGGU........................ len:17 al:1
......................................................AAAGAAGUACAAGUGGUAGGuA................... len:22 al:4
......................................................AAAGAAGUACAAGUGGUuG...................... len:19 al:12
......................................................AAAGAAGUACAAGgGGUAGGG.................... len:21 al:14
......................................................AgAGAAGUACAAGUGGUAGGGA................... len:22 al:13
......................................................AAAGAAGUACAgGUGGUAG...................... len:19 al:47
......................................................AAAGAAGUACAAGUGGgAGGG.................... len:21 al:21
......................................................AAAGAAGUACAAGUGGUAGGGcG.................. len:23 al:6
......................................................AAAGAAGUACAAaUGGUAGGG.................... len:21 al:14
......................................................AgAGAAGUACAAGUGGUA....................... len:18 al:7
......................................................AAAGuAGUACAAGUGGUAG...................... len:19 al:3
......................................................AAAGAAGUACAcGUGGUAGG..................... len:20 al:2
......................................................AAAaAAGUACAAGUGGUAGGG.................... len:21 al:7
......................................................AAAGAAGUACAAGUGGUA....................... len:18 al:2232
......................................................AcAGAAGUACAAGUGGUAG...................... len:19 al:33
......................................................AAAGAgGUACAAGUGGUA....................... len:18 al:10
......................................................AAAGgAGUACAAGUGGUAG...................... len:19 al:72
......................................................AAAcAAGUACAAGUGGUAG...................... len:19 al:1
......................................................AAAGgAGUACAAGUGGUAGGG.................... len:21 al:142
......................................................AAAGAAGaACAAGUGGUAGGG.................... len:21 al:8
......................................................AAAGAAGUACAAGUGGaAGGGA................... len:22 al:1
......................................................AAAGAAGUAuAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGUGGcA....................... len:18 al:43
......................................................AgAGAAGUACAAGUGGUAGGG.................... len:21 al:213
......................................................AAAGAAGUACAAGUGGUAGGGAuG................. len:24 al:2
......................................................uAAGAAGUACAAGUGGUAGGG.................... len:21 al:72
......................................................AAAGAAGUACAAGUGGU........................ len:17 al:134
......................................................AAAGAAGUACAAGgGGUAG...................... len:19 al:5
......................................................AAAGAuGUACAAGUGGUAGGGA................... len:22 al:1
......................................................AAAaAAGUACAAGUGGUAG...................... len:19 al:4
......................................................AAAGAAGUACAuGUGGUAGGG.................... len:21 al:22
......................................................AAAGAAGUACAAGUGcUAGGG.................... len:21 al:1
......................................................AAAGAAGUACgAGUGGUAGGG.................... len:21 al:205
......................................................AAAGAuGUACAAGUGGUAG...................... len:19 al:2
......................................................AAAuAAGUACAAGUGGUAGGG.................... len:21 al:2
......................................................AAAGAAGUACAAGUGGc........................ len:17 al:26
......................................................AAAGAAGUACAAGcGGUAGG..................... len:20 al:9
......................................................AAAGAAGUACAAGUGGUuGG..................... len:20 al:4
......................................................AAAGAAcUACAAGUGGUAGGG.................... len:21 al:3
......................................................gAAGAAGUACAAGUGGUAGGGA................... len:22 al:11
......................................................AAAGAAGUACAAGUGGgAG...................... len:19 al:23
......................................................AAAGAAGUACAAGUGGUcGG..................... len:20 al:63
......................................................AAAGAAGUACAAGUGG......................... len:16 al:1
......................................................AAAGAAGUAuAAGUGGUAGG..................... len:20 al:4
......................................................AAAGAAGUACAAGUGGUAGGGgG.................. len:23 al:4
......................................................AAgGAAGUACAAGUGGUAGGGA................... len:22 al:9
......................................................AAAGAAGUACAAGUGGUuGGG.................... len:21 al:42
......................................................AAAGAAGUACAAGUGGUAuGGA................... len:22 al:3
......................................................AAAGAAGUcCAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGUACAAGUGGaAGGG.................... len:21 al:12
......................................................AAAGAAGcACAAGUGGUAGGGA................... len:22 al:5
......................................................AAAGAAGUACAgGUGGUAGGGA................... len:22 al:9
......................................................AAAGAgGUACAAGUGGUAGGG.................... len:21 al:130
......................................................gAAGAAGUACAAGUGGUAGGG.................... len:21 al:252
......................................................AAAGAAGUACAAGaGGUAGG..................... len:20 al:5
......................................................AAAGAAGUACAAGUGGgAGGGA................... len:22 al:1
......................................................AAAGAAGUACAAuUGGUAG...................... len:19 al:1
......................................................AcAGAAGUACAAGUGGUAGGGA................... len:22 al:9
......................................................AAAGAAGUgCAAGUGGUAGGGA................... len:22 al:15
......................................................AAcGAAGUACAAGUGGUAGG..................... len:20 al:120
......................................................AAAGAAGUACAAGgGGUA....................... len:18 al:3
......................................................AAAGuAGUACAAGUGGUAGGG.................... len:21 al:16
......................................................AAAGAAaUACAAGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGaUAGG..................... len:20 al:7
......................................................AAAGAAGUACAAGUGGUAc...................... len:19 al:576
......................................................AAAGAAGUACAAGUGGUAaG..................... len:20 al:85
......................................................cAAGAAGUACAAGUGGUA....................... len:18 al:17
......................................................cAAGAAGUACAAGUGGUAG...................... len:19 al:147
......................................................AAAGAAGUACAAGUcGUA....................... len:18 al:1
......................................................AAAGAAGUACgAGUGGUAGGGA................... len:22 al:12
......................................................AAAGAAGUACAAGgGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAcUGGUAGGG.................... len:21 al:2
......................................................AAAGAcGUACAAGUGGUAGGG.................... len:21 al:3
......................................................AAAGgAGUACAAGUGGUAGG..................... len:20 al:23
......................................................gAAGAAGUACAAGUGGUAGG..................... len:20 al:45
......................................................AAAGAAGUACAAaUGGUAG...................... len:19 al:6
......................................................AAAGAAGUACAAGUGGUuGGGA................... len:22 al:3
......................................................AAAGAAGUACAAGUGcUA....................... len:18 al:1
......................................................AAAGAAGUAaAAGUGGUAG...................... len:19 al:1
......................................................AAAGcAGUACAAGUGGUA....................... len:18 al:1
......................................................AgAGAAGUACAAGUGGUAG...................... len:19 al:81
......................................................AAAGAAGUACAAGUuGUAGGG.................... len:21 al:13
......................................................AAAGAAGUACAAGcGGUAGGGA................... len:22 al:5
......................................................AAAGAAGUACAAGUGGUAGGaA................... len:22 al:30
......................................................AAAGAAGgACAAGUGGUAGGGA................... len:22 al:2
......................................................AAAGAAGUACAAGUGGUAGaG.................... len:21 al:1121
......................................................AAAGAAGUACAAGUGGUAGuG.................... len:21 al:29
......................................................AAAGAAGUACAAGUGcU........................ len:17 al:1
......................................................AAAGAAGUACuAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGUGGUAGGa.................... len:21 al:15473
......................................................AAAGAAGUACAAGUGGUAGGGuG.................. len:23 al:88
......................................................AcAGAAGUACAAGUGGUA....................... len:18 al:9
......................................................AAAGcAGUACAAGUGGUAGGG.................... len:21 al:3
......................................................AAAGAAGUACAAGUGGUgGG..................... len:20 al:30
......................................................AAAGAAGUACAAGUGGUgGGGA................... len:22 al:12
......................................................AAAGAAGUAgAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGUACAAGUuGUAGG..................... len:20 al:1
......................................................AAAGgAGUACAAGUGGUAGGGA................... len:22 al:10
......................................................AAAGAAGcACAAGUGGUA....................... len:18 al:2
......................................................AAuGAAGUACAAGUGGUAGGGA................... len:22 al:2
......................................................AAAGAAGUACAAGUGGaAG...................... len:19 al:5
......................................................AAuGAAGUACAAGUGGUA....................... len:18 al:2
......................................................AAAGAAGUACAAGUGGUAGGGg................... len:22 al:984
......................................................AAAGAAGUACuAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAAGcACAAGUGGUAGGG.................... len:21 al:64
......................................................AAuGAAGUACAAGUGGUAG...................... len:19 al:6
......................................................AAgGAAGUACAAGUGGUAGG..................... len:20 al:23
......................................................uAAGAAGUACAAGUGGUAG...................... len:19 al:30
......................................................AAAGAAGUACuAGUGGUAGGG.................... len:21 al:32
......................................................AAAuAAGUACAAGUGGUAG...................... len:19 al:5
......................................................cAAGAAGUACAAGUGGUAGGG.................... len:21 al:375
......................................................AAAGAAGUACAgGUGGUAGG..................... len:20 al:22
......................................................AAgGAAGUACAAGUGGUAG...................... len:19 al:66
......................................................AAAGAAGUACAAGUuGUAG...................... len:19 al:4
......................................................AAAGAAGUACAAGUGGUAcGG.................... len:21 al:4
......................................................AAAGAAGUACAAGUGGUgGGG.................... len:21 al:175
......................................................AAAGAAGUACAAaUGGUAGG..................... len:20 al:3
......................................................AAAGAAGUACAAGUGGUAGGu.................... len:21 al:2951
......................................................AAAGAAGUACAAGcGGUA....................... len:18 al:3
......................................................AuAGAAGUACAAGUGGUAG...................... len:19 al:11
......................................................cAAGAAGUACAAGUGGUAGGGA................... len:22 al:16
......................................................AAAGcAGUACAAGUGGUAG...................... len:19 al:1
......................................................AAgGAAGUACAAGUGGUA....................... len:18 al:14
......................................................AAAGAAGUAgAAGUGGUAGGG.................... len:21 al:3
......................................................AAAGAAaUACAAGUGGUAGGG.................... len:21 al:23
......................................................AAAGAAGUACAcGUGGUAGGG.................... len:21 al:7
......................................................AAAGAAGUACAAGUGGUAGG..................... len:20 al:8123
......................................................AAAGcAGUACAAGUGGUAGG..................... len:20 al:1
......................................................AAcGAAGUACAAGUGGUAG...................... len:19 al:266
......................................................AAAGAAGUACAAGcGGUAGGG.................... len:21 al:90
......................................................AAAGAAGUACAuGUGGUAGG..................... len:20 al:5
......................................................AAAGAAGcACAAGUGGUAGG..................... len:20 al:8
......................................................AAAGAAGUACAAGUGGUAu...................... len:19 al:528
......................................................uAAGAAGUACAAGUGGUAGG..................... len:20 al:11
......................................................AuAGAAGUACAAGUGGUAGG..................... len:20 al:5
......................................................AAAGAAaUACAAGUGGUAGGGA................... len:22 al:3
......................................................AAAGAAGUACgAGUGGUA....................... len:18 al:9
......................................................AAAGAAGUACAAGUGGUAGcG.................... len:21 al:414
......................................................AAAGAAGUAaAAGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUgCAAGUGGUAGG..................... len:20 al:23
......................................................AAAGAAGUACAAGUGGUAaGGA................... len:22 al:3
......................................................AAAGAAGaACAAGUGGUAG...................... len:19 al:3
......................................................AAAGAAGUACgAGUGGU........................ len:17 al:2
......................................................AAAGAAGUACAAGUGaUAGGGA................... len:22 al:4
......................................................AAAGAAGUACAAGUGGUAGu..................... len:20 al:483
......................................................AAAGAAGUACAAGUGGUgG...................... len:19 al:93
......................................................AAcGAAGUACAAGUGGUAGGGA................... len:22 al:46
......................................................AAAGAAGUACAAGUcGUAGG..................... len:20 al:1
......................................................cAAGAAGUACAAGUGGUAGG..................... len:20 al:85
......................................................AAAGuAGUACAAGUGGUAGG..................... len:20 al:3
......................................................AAAGAAuUACAAGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAuUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGUg....................... len:18 al:50
......................................................AAAGAAGUACAAGUGGUAGaGA................... len:22 al:6
......................................................AAAGAAGUACAAGUGGUAGGGA................... len:22 al:2616
......................................................AAAGAAGUACuAGUGGUAGG..................... len:20 al:6
......................................................AAAGAAGUACAgGUGGUA....................... len:18 al:7
......................................................AAAGgAGUACAAGUGGUA....................... len:18 al:8
......................................................AgAGAAGUACAAGUGGUAGG..................... len:20 al:27
......................................................AAAGAgGUACAAGUGGUAGG..................... len:20 al:29
......................................................AAAGAAGUACAAGUGGUAG...................... len:19 al:18119
......................................................AAAGAAGUACAcGUGGUAG...................... len:19 al:5
......................................................AAAGAAuUACAAGUGGUAGGG.................... len:21 al:3
......................................................AAAGAAGUACAAGUGGUcGGG.................... len:21 al:29
......................................................AAAGAAGUACAgGUGGU........................ len:17 al:2
......................................................AAAGAAGUACAAGUGGUu....................... len:18 al:8
......................................................AAuGAAGUACAAGUGGUAGG..................... len:20 al:7
......................................................AAAGAAGUACAAGUGGUAGGGuGG................. len:24 al:3
......................................................AAAGAAGUACAAGUaGUA....................... len:18 al:2
......................................................AAAGAAGaACAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUAuAAGUGGUAGGG.................... len:21 al:37
......................................................AAAGAAGUACAAGUGGgA....................... len:18 al:4
......................................................AuAGAAGUACAAGUGGUAGGGA................... len:22 al:2
......................................................AAAGAAGUACAAGUGGUAGGGAu.................. len:23 al:55
......................................................AAAGAAGUACAAGUGGUcG...................... len:19 al:208
......................................................AAAGAAGUACAAGUaGU........................ len:17 al:1
......................................................AAAGAAGUACAAGUGGUAGGc.................... len:21 al:642
......................................................AAAGAAGgACAAGUGGUAGGG.................... len:21 al:4
......................................................AAAGAAGUACuAGUGGUAG...................... len:19 al:8
......................................................AAAGAAGUgCAAGUGGUAGGG.................... len:21 al:109
......................................................AAAGAAGUACAAGUGGg........................ len:17 al:9
......................................................AAAGuAGUACAAGUGGUAGGGA................... len:22 al:1
......................................................AAuGAAGUACAAGUGGUAGGG.................... len:21 al:18
......................................................AAAGAAGUACAAGUGGUAGGGc................... len:22 al:3198
......................................................AAAGAAGUACAAGcGGUAG...................... len:19 al:26
......................................................AAAGAAGUACAAuUGGUAGGGA................... len:22 al:1
......................................................AAAGAAaUACAAGUGGUA....................... len:18 al:2
......................................................AAAGAAGUcCAAGUGGUAGGG.................... len:21 al:6
......................................................AAAGAAGUACAgGUGGUAGGG.................... len:21 al:152
......................................................AAAGAAGUACAAGUGGcAGGGA................... len:22 al:5
......................................................AAAGAAGUACAAGUGGUAGa..................... len:20 al:2430
......................................................AAAGAAGUACAAGUGGUAGc..................... len:20 al:93
......................................................AAAGAAGUACAAGUaGUAGGG.................... len:21 al:30
......................................................AAAcAAGUACAAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAAGgACAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGUACAAGaGGUAGGGA................... len:22 al:2
......................................................uAAGAAGUACAAGUGGUAGGGA................... len:22 al:6
......................................................AAAGAgGUACAAGUGGUAG...................... len:19 al:61
......................................................AAAGAAGUACAAGUaGUAGG..................... len:20 al:2
......................................................AAAGAAGUACAAGUGGgAGG..................... len:20 al:8
......................................................AAAGAAGUACAAGUGGUAGGGAc.................. len:23 al:7
......................................................AAAGAAGUACAAGUGGUAGGGAa.................. len:23 al:39
......................................................AAAGuAGUACAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGaGGUAG...................... len:19 al:4
......................................................AAAGAAGUACAAGUaGUAG...................... len:19 al:16
......................................................AAAGAAGUACAAuUGGUAGGG.................... len:21 al:12
......................................................AcAGAAGUACAAGUGGUAGG..................... len:20 al:17
......................................................AAAGAAGaACAAGUGGUAGG..................... len:20 al:1
......................................................AAgGAAGUACAAGUGGUAGGG.................... len:21 al:175
......................................................AAAGAAGUACAAGUGGUAa...................... len:19 al:3927
......................................................AAAGAAuUACAAGUGGUAG...................... len:19 al:4
......................................................AAAGAAaUACAAGUGGUAG...................... len:19 al:8
......................................................AAAGAAGUACAAGUGuUAGGG.................... len:21 al:6
......................................................AAAGAAGUACAAGUGGaA....................... len:18 al:47
......................................................AAAGAAGUACAAGUGGaAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGuUAGG..................... len:20 al:3
......................................................AAAGAAGUACAAGUGGUAGGcA................... len:22 al:15
......................................................AAAGAAGUACAAGUGGa........................ len:17 al:4
......................................................AcAGAAGUACAAGUGGUAGGG.................... len:21 al:86
......................................................AuAGAAGUACAAGUGGUAGGG.................... len:21 al:33
......................................................AAAGAAGUACAAGUGaUAGGG.................... len:21 al:28
......................................................AAAGAAGUACAAGaGGUAGGG.................... len:21 al:15
......................................................AAAGAAGUACAAGUaGUAGGGA................... len:22 al:3
......................................................AAAGAAGcACAAGUGGUAG...................... len:19 al:32
......................................................AAcGAAGUACAAGUGGUA....................... len:18 al:38
......................................................AAAGAAGUAuAAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAuGUACAAGUGGUAGGG.................... len:21 al:11
......................................................AAAGAAGUACAAGUGGcAGG..................... len:20 al:19
......................................................AAAGAAGUACcAGUGGUAG...................... len:19 al:3
......................................................AAAGAgGUACAAGUGGUAGGGA................... len:22 al:6
......................................................AAAGAAGUAuAAGUGGUAG...................... len:19 al:23
......................................................AAAGAAGUACAAGUGGUAGGG.................... len:21 al:43823
......................................................AAAGAAGUACgAGUGGUAGG..................... len:20 al:36
......................................................AAcGAAGUACAAGUGGUAGGG.................... len:21 al:643
......................................................AAAGAAGUACAuGUGGUAG...................... len:19 al:20
......................................................AAcGAAGUACAAGUGGU........................ len:17 al:3
......................................................AAAGAuGUACAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGUGGUAcG..................... len:20 al:181
......................................................AAAGAAGUACAAGUGGUAGuGA................... len:22 al:3
......................................................AAAGAAGUACcAGUGGUAGGG.................... len:21 al:7
......................................................AAAGAAGUACAAGUGGUAGGGAG.................. len:23 al:5
......................................................AAAGAAGUACcAGUGGUAGG..................... len:20 al:3
......................................................AAAGAAGUACAAGUGGcAG...................... len:19 al:25
.......................................................AAGAAGUACAAGUGGUAGGa.................... len:20 al:14
.......................................................AAGAAGUACgAGUGGUAGGG.................... len:20 al:1
.......................................................uAGAAGUACAAGUGGUAGGG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUAGGG.................... len:20 al:34
.......................................................AAGAAGUACAAGUGGUAGG..................... len:19 al:12
.......................................................AAGAAGUACAAGUGGUgGG..................... len:19 al:1
.......................................................AAGAAGUACAAGUGGUAGaG.................... len:20 al:2
.......................................................AAGAAGUACAAGUGGUAG...................... len:18 al:14
.......................................................AAGAAGUACAAGUGGUAGGGg................... len:21 al:1
.......................................................AAGAAGUACAAGUGGUAGGGc................... len:21 al:1
.......................................................AAaAAGUACAAGUGGUAGGG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUAGu..................... len:19 al:1
.......................................................AAGAAGUACAAGUGGUAGGc.................... len:20 al:1
.......................................................cAGAAGUACAAGUGGUAGGG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUAGGGu................... len:21 al:17
.......................................................AAuAAGUACAAGUGGUAGG..................... len:19 al:1
.......................................................AAGAAGUACAAGUGGUAGGu.................... len:20 al:4
.......................................................AAGAAGUACAAGUGGUAcG..................... len:19 al:1
.......................................................AAGAAGUACAAGUGGUcGG..................... len:19 al:1
.......................................................AAGAAGUACAAGUGGUAa...................... len:18 al:3
........................................................AGAAGUACAAGUGGUAGGGu................... len:20 al:17
........................................................AGAAGUACAAGUGGUAGGa.................... len:19 al:12
........................................................AGAAGUACAAGUGGUAcG..................... len:18 al:1
........................................................AGAAGUACAAGUGGUAGGGg................... len:20 al:2
........................................................AaAAGUACAAGUGGUAGGG.................... len:19 al:1
........................................................AGAAGUACAAGUGGUAGG..................... len:18 al:5
........................................................AGAAGUACAAGUGGUAGGGA................... len:20 al:6
........................................................uGAAGUACAAGUGGUAGGG.................... len:19 al:1
........................................................AGAAGUACAAGUGGUAG...................... len:17 al:3
........................................................AGAAGUACAgGUGGUAGGG.................... len:19 al:2
........................................................AGAAGUACAAGUGGUAGcG.................... len:19 al:1
........................................................AGAAGUACAAGUGGUAGGGc................... len:20 al:6
........................................................AGAAGUACAAGUGGUAGGu.................... len:19 al:1
........................................................AGAAGUACAAGUGGUAGGG.................... len:19 al:44
.........................................................GAAGUACAAGUGGUAGGa.................... len:18 al:1
.........................................................aAAGUACAAGUGGUAGGG.................... len:18 al:2
.........................................................GAAGUACAAGUGGUAGGG.................... len:18 al:5
..........................................................AAGUACAAGUGGUAG...................... len:15 al:1
..........................................................AAGUACAAGUGGUAGGGu................... len:18 al:3
..........................................................AAGUACAAGUGGUAGGGc................... len:18 al:4
...........................................................................AGGGGGUGUCgCCAAUUCGC len:20 al:1
...........................................................................AGGGGGUGUCACCAAUUCGC len:20 al:1