Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2-Pmea-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000003:495066-495158 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.2-Pmea-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_1115.ps
Locus Name: Cluster_1115
AAACUGCUGUCUGUGGACAUGGUGAAAGUCGCUUCAAUAAACAUUUGACUGUAUAUUGUACGACUCUCAUCGUGUCCAAGGCGGCCUCGACCG
.....(((((((.((((((((((((.(((((...(((((.(((......))).)))))..))))).)))))))))))))))))))........ (-40.80)
...................UGGUGAAAGUCGCUUCAAUAAACA.................................................. len:24 al:2
...................UcGUGAAAGUCGCUUCAAUAAACA.................................................. len:24 al:1
....................aGUGAAAGUCGCUUCAAUAAACA.................................................. len:23 al:1
....................GGUGAAAGUCGCUUCAAUAAAC................................................... len:22 al:1
....................GGUGAAAGUCGCUUCAAUAAACA.................................................. len:23 al:8
....................GGUGAAAGUCGCUUCAAUAAA.................................................... len:21 al:1
..................................................GUAUAUUGUACGACUCUCAUCGgG................... len:24 al:1
...................................................UAUAUUGUACGACUCUCAUCGgG................... len:23 al:4
...................................................UAUAUUGUACGACUCUCAcC...................... len:20 al:1
...................................................UAUAUUGUACGACUCUCAU....................... len:19 al:4
...................................................UAUAUUGUAuGACUCUCAUCGU.................... len:22 al:2
...................................................UAUAUUGUACGACUCUCAUCGg.................... len:22 al:34
...................................................UAUAUUGUACGACUCUCAUuGUG................... len:23 al:2
...................................................UAUAUUGUACGACUCgCAUCGUG................... len:23 al:1
...................................................UAUAUUGUACGACUCUCAUCaU.................... len:22 al:15
...................................................UAUAUUGUgCGACUCUCAUCGUG................... len:23 al:1
...................................................UAUAUUGcACGACUCUCAUCGU.................... len:22 al:1
...................................................cAUAUUGUACGACUCUCAUCGU.................... len:22 al:5
...................................................UAUAUUGUACGACUCUCAUCGU.................... len:22 al:438
...................................................UAUAUUGUACGACUCUCAUCGUGUu................. len:25 al:4
...................................................UAUAcUGUACGACUCUCAUCGU.................... len:22 al:1
...................................................UAUAUUGUACGACUCUCAUCGc.................... len:22 al:109
...................................................UAUAUUGUACGACUCUCAUCG..................... len:21 al:5
...................................................UAUAUUGUACGACUCUCAUCGa.................... len:22 al:43
...................................................UAUAUUGUACGACUCUCuUCGU.................... len:22 al:1
...................................................UAUAUUGUgCGACUCUCAUCG..................... len:21 al:1
...................................................UAUAUUGUACGACUCUCgUC...................... len:20 al:1
...................................................UAUAUUGUACGACUCUCAUCGUG................... len:23 al:73
...................................................UAcAUUGUACGACUCUCAUCGU.................... len:22 al:1
...................................................UAUAUUGUACGACUCUCA........................ len:18 al:2
...................................................aAUAUUGUACGACUCUCAUC...................... len:20 al:1
...................................................UAUAUcGUACGACUCUCAUCGUG................... len:23 al:1
...................................................UAUAaUGUACGACUCUCAUCGU.................... len:22 al:3
...................................................UAUAUUGUACGACUCUCAUu...................... len:20 al:1
...................................................UAUAUUGUACGACUCUCAUCGUa................... len:23 al:35
...................................................UAUAUUGUACGACcCUCAUCGU.................... len:22 al:1
...................................................UAUAUUGUACGACUCUCAUCGcG................... len:23 al:4
...................................................UAUAUUGUACGACUCUCAUCGUc................... len:23 al:9
...................................................UAUAUUGUACGACUCUCAUCGUGU.................. len:24 al:22
...................................................cAUAUUGUACGACUCUCAUCGUG................... len:23 al:1
...................................................UAUAUUGUACGACUCUCAUCGUu................... len:23 al:31
...................................................UAUAUUGUACGACUCUCAUCGUGa.................. len:24 al:4
...................................................UAUAUUGUACGACUCUCAUCGUGg.................. len:24 al:6
...................................................UAUAUUGUACGACUCUCAcCGU.................... len:22 al:1
...................................................UAUAUUGUgCGACUCUCAUCGU.................... len:22 al:1
...................................................UAUAUUGUACGgCUCUCAUCGUG................... len:23 al:1
...................................................UAUAUUGUACGACUCUCAUCa..................... len:21 al:4
...................................................UAUAUUGUACGACUCUCAUa...................... len:20 al:3
...................................................UgUAUUGUACGACUCUCAUCGU.................... len:22 al:1
...................................................UAUAUUGUACGgCUCUCAUCGU.................... len:22 al:1
...................................................UAUAUUGUACGACUCcCAUCGU.................... len:22 al:1
...................................................UgUAUUGUACGACUCUCAUCGUGU.................. len:24 al:1
...................................................cAUAUUGUACGACUCUCAUC...................... len:20 al:2
...................................................UAUAUUGUACGACUCUCAUCGUGc.................. len:24 al:6
...................................................UAUAUUGUACGACUCUCAUCGaG................... len:23 al:1
...................................................UAUAUUGUACGACUCUCAUC...................... len:20 al:55
...................................................UAUAUUGUACGACUCUCAUuGU.................... len:22 al:11
...................................................UAUAUUGUACGACUCUCAUCGUuU.................. len:24 al:4
...................................................UAUAUUGUACGACUCUCAUCcU.................... len:22 al:6
...................................................aAUAUUGUACGACUCUCAUCGU.................... len:22 al:3
...................................................UAUAUUGUACGACUCUCAUCGUGUa................. len:25 al:2
....................................................AUAUUGUACGACUCUCAUCGU.................... len:21 al:1
....................................................AUAUUGUACGACUCUCAUCGgG................... len:22 al:1
.....................................................UAUUGUACGACUCUCAUCGU.................... len:20 al:1