Locus	Name	Chrom	Start	End	Length	Reads	DistinctSequences	FracTop	Strand	MajorRNA	MajorRNAReads	Short	Long	21	22	23	24	DicerCall	MIRNA	known_miRNAs
Pocillopora_meandrina_HIv1___Sc0000000:9092-9521	Cluster_1	Pocillopora_meandrina_HIv1___Sc0000000	9092	9521	430	10833	356	0.9999076894673682	+	GGGGGUAUAGCUCAGUGGUAGA	3890	1408	3758	629	4434	178	426	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:53578-53997	Cluster_2	Pocillopora_meandrina_HIv1___Sc0000000	53578	53997	420	286	13	0.9965034965034965	+	GCCUAAGUUGCUUGGAACA	137	284	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:150243-150718	Cluster_3	Pocillopora_meandrina_HIv1___Sc0000000	150243	150718	476	2549	247	0.0	-	UGGCUAUGAUGAAAAUGACU	335	849	380	634	376	139	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:173728-174150	Cluster_4	Pocillopora_meandrina_HIv1___Sc0000000	173728	174150	423	1257	65	0.9968178202068417	+	UUUGAUUGCUGUGAUCUGGUUG	432	106	2	39	636	444	30	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:187562-188076	Cluster_5	Pocillopora_meandrina_HIv1___Sc0000000	187562	188076	515	187	35	0.4385026737967914	.	AUAAAUGUCACUACAAGAAACCUGAAAUCGU	25	0	179	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:485730-486254	Cluster_6	Pocillopora_meandrina_HIv1___Sc0000000	485730	486254	525	286	127	1.0	+	GAUGGGUGUUAUUACUCCUCAGACAGAC	48	66	183	7	11	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:496020-496432	Cluster_7	Pocillopora_meandrina_HIv1___Sc0000000	496020	496432	413	72	24	1.0	+	AUGUAGUCGAGCAAAGUCCAUGUGGACGA	27	0	66	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:525310-527342	Cluster_8	Pocillopora_meandrina_HIv1___Sc0000000	525310	527342	2033	14694	2987	0.1809582142371036	-	UUUUCGUCACUUUCUUCAGCCUCAGAGU	966	136	13598	50	106	303	501	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:541262-541723	Cluster_9	Pocillopora_meandrina_HIv1___Sc0000000	541262	541723	462	726	137	0.081267217630854	-	UUGGACGAAAUUUCGAGGUUCACACUCGUU	91	1	720	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:551887-552690	Cluster_10	Pocillopora_meandrina_HIv1___Sc0000000	551887	552690	804	852	273	0.215962441314554	.	UUCAAGGAGGAUGUAUCCACUGUCAUU	92	10	778	11	4	19	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:555672-556458	Cluster_11	Pocillopora_meandrina_HIv1___Sc0000000	555672	556458	787	858	199	0.08624708624708624	-	UUGGACGAAAUUUCGAGGUUCACACUCGUU	83	3	842	0	5	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:580919-581465	Cluster_12	Pocillopora_meandrina_HIv1___Sc0000000	580919	581465	547	214	91	0.8878504672897196	+	UCAAAUACAACACCAAAAGAC	52	8	128	60	4	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:591376-591939	Cluster_13	Pocillopora_meandrina_HIv1___Sc0000000	591376	591939	564	642	184	0.942367601246106	+	UGCAUUUUCUCCGAGAUCUCUGGUCGGG	92	9	613	5	0	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:639521-640061	Cluster_14	Pocillopora_meandrina_HIv1___Sc0000000	639521	640061	541	566	149	0.7703180212014135	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	177	0	548	5	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:659874-660274	Cluster_15	Pocillopora_meandrina_HIv1___Sc0000000	659874	660274	401	94	35	0.3617021276595745	.	AAGGGUAAAAAAGCUGACGUA	14	42	4	27	19	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:721030-721459	Cluster_16	Pocillopora_meandrina_HIv1___Sc0000000	721030	721459	430	632	62	1.0	+	UGAUGAUCGUAAUGAUUUCCAUGGGGU	133	4	597	1	1	22	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:721923-722470	Cluster_17	Pocillopora_meandrina_HIv1___Sc0000000	721923	722470	548	2930	430	1.0	+	UAGCAUACAUGUAGACCCUGGUAGAGUA	487	281	1973	86	277	194	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:727164-727725	Cluster_18	Pocillopora_meandrina_HIv1___Sc0000000	727164	727725	562	842	192	1.0	+	GACCACAUGUUACUGAUGAGCUUAGU	143	74	556	22	53	66	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:815898-816398	Cluster_19	Pocillopora_meandrina_HIv1___Sc0000000	815898	816398	501	1440	483	0.005555555555555556	-	UACUUAUAAGCAGUAGAGGCGUU	70	433	466	182	93	170	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:818027-818120	Cluster_20	Pocillopora_meandrina_HIv1___Sc0000000	818027	818120	94	12096	283	0.9990906084656085	+	UGUUCUCUCUGCAGUAAGCAUGU	3258	393	78	202	3329	5487	2607	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:987729-988269	Cluster_21	Pocillopora_meandrina_HIv1___Sc0000000	987729	988269	541	554	142	0.776173285198556	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	199	2	532	1	3	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1215326-1215757	Cluster_22	Pocillopora_meandrina_HIv1___Sc0000000	1215326	1215757	432	1006	173	0.032803180914512925	-	GUCUUUGUAGUGUAGUGG	186	536	427	14	12	14	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1276027-1276447	Cluster_23	Pocillopora_meandrina_HIv1___Sc0000000	1276027	1276447	421	136	60	0.9926470588235294	+	CGGCUGUUAACCGAAAGGUUA	14	19	29	21	29	29	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1276611-1277082	Cluster_24	Pocillopora_meandrina_HIv1___Sc0000000	1276611	1277082	472	1991	525	1.0	+	CCAAUGGAUAAGGCAUCUGACUGCG	70	428	990	96	169	133	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1336780-1337291	Cluster_25	Pocillopora_meandrina_HIv1___Sc0000000	1336780	1337291	512	2049	469	0.005856515373352855	-	UCCCGGGUCUCGGCAGCCUUUU	270	283	310	393	540	370	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1378697-1379231	Cluster_26	Pocillopora_meandrina_HIv1___Sc0000000	1378697	1379231	535	1361	425	0.0007347538574577516	-	UAAGACUUUCAUUUAGACCUGGAACAAUU	119	167	875	41	53	143	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1688897-1689413	Cluster_27	Pocillopora_meandrina_HIv1___Sc0000000	1688897	1689413	517	431	199	0.5475638051044084	.	ACAUUUAGUAAUUACAAGAACCAUGACACU	46	4	395	4	4	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1750814-1751515	Cluster_28	Pocillopora_meandrina_HIv1___Sc0000000	1750814	1751515	702	274	130	0.916058394160584	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	30	0	264	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1752746-1753172	Cluster_29	Pocillopora_meandrina_HIv1___Sc0000000	1752746	1753172	427	246	133	0.8373983739837398	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	25	3	221	0	0	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2007021-2007452	Cluster_30	Pocillopora_meandrina_HIv1___Sc0000000	2007021	2007452	432	287	101	0.03484320557491289	-	UGUGUAAACAUUGCAACACGAUCUGACA	26	5	276	2	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2063456-2063972	Cluster_31	Pocillopora_meandrina_HIv1___Sc0000000	2063456	2063972	517	4204	616	0.0028544243577545195	-	AAGGAUGCCGAGAUAGCUC	744	1553	467	547	968	487	182	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2159721-2161042	Cluster_32	Pocillopora_meandrina_HIv1___Sc0000000	2159721	2161042	1322	1448	491	0.08011049723756906	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	103	14	1354	8	6	36	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2750560-2752027	Cluster_33	Pocillopora_meandrina_HIv1___Sc0000000	2750560	2752027	1468	1757	772	0.9590210586226523	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	56	6	1642	10	20	29	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2872019-2872110	Cluster_34	Pocillopora_meandrina_HIv1___Sc0000000	2872019	2872110	92	176	29	1.0	+	AUAGUAUUGUCGACAGGUACU	63	16	0	115	42	3	0	21	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:2959037-2959445	Cluster_35	Pocillopora_meandrina_HIv1___Sc0000000	2959037	2959445	409	107	65	0.9719626168224299	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	8	2	91	2	8	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2959658-2960409	Cluster_36	Pocillopora_meandrina_HIv1___Sc0000000	2959658	2960409	752	1396	570	0.8108882521489972	+	UUCCAGCACAAAAGAGACAAAAGGAGUUCAA	53	34	1203	14	22	36	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3005020-3005445	Cluster_37	Pocillopora_meandrina_HIv1___Sc0000000	3005020	3005445	426	86	22	0.0	-	UCCGAUUUAAAAGAUUCUUUGUUUGU	26	1	84	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3005892-3006331	Cluster_38	Pocillopora_meandrina_HIv1___Sc0000000	3005892	3006331	440	924	145	0.01948051948051948	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	247	3	910	0	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3006339-3006751	Cluster_39	Pocillopora_meandrina_HIv1___Sc0000000	3006339	3006751	413	139	72	0.18705035971223022	-	UUCUUUGUAACGCUGUGGUCCUUCCAC	19	0	112	4	1	18	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3563547-3563966	Cluster_40	Pocillopora_meandrina_HIv1___Sc0000000	3563547	3563966	420	77	21	0.987012987012987	+	GAAUAUUGGAGAACUCGUGGUUGUGCAGU	31	6	67	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3581968-3582415	Cluster_41	Pocillopora_meandrina_HIv1___Sc0000000	3581968	3582415	448	358	158	0.6061452513966481	.	UUAUUUCUACAUAGAGUGAGCUCACAUC	85	43	260	25	8	15	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3603652-3604077	Cluster_42	Pocillopora_meandrina_HIv1___Sc0000000	3603652	3604077	426	223	32	0.04484304932735426	-	UAAGACAUUGGCAUACUUGGCAUACA	160	1	212	1	3	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3628199-3628623	Cluster_43	Pocillopora_meandrina_HIv1___Sc0000000	3628199	3628623	425	69	16	0.0	-	UGAACUACUGCUCGUACUCUAGAUACG	24	1	68	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3691324-3691932	Cluster_44	Pocillopora_meandrina_HIv1___Sc0000000	3691324	3691932	609	7968	1062	0.0	-	CACUCUGAGAAGUGGAGAGACAGUU	1569	489	5213	283	301	433	1249	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3821021-3821448	Cluster_45	Pocillopora_meandrina_HIv1___Sc0000000	3821021	3821448	428	142	76	0.04225352112676056	-	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	24	34	73	17	10	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3822574-3823003	Cluster_46	Pocillopora_meandrina_HIv1___Sc0000000	3822574	3823003	430	184	95	0.02717391304347826	-	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	17	40	94	22	13	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3848323-3848809	Cluster_47	Pocillopora_meandrina_HIv1___Sc0000000	3848323	3848809	487	9519	593	0.0	-	AUACUGUGAUGAAGAAAAGGACUCCCU	1427	540	5690	506	595	1533	655	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3848821-3849297	Cluster_48	Pocillopora_meandrina_HIv1___Sc0000000	3848821	3849297	477	256	162	0.00390625	-	GAUGACAACAAGAAACUUGGAGAA	9	59	101	27	24	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3849327-3849741	Cluster_49	Pocillopora_meandrina_HIv1___Sc0000000	3849327	3849741	415	182	117	0.0	-	GUAUGUUAAGCUUGUUGAGGCCCUGU	11	51	78	23	10	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4241544-4242078	Cluster_50	Pocillopora_meandrina_HIv1___Sc0000000	4241544	4242078	535	2564	378	1.0	+	CCUGGGAAAUGGAAUCCAACAGAA	847	295	1053	150	53	72	941	N	N	mmu-miR-466i-5p;mmu-miR-466i-5p;mmu-miR-466i-5p;mmu-miR-466i-5p
Pocillopora_meandrina_HIv1___Sc0000000:4422273-4423231	Cluster_51	Pocillopora_meandrina_HIv1___Sc0000000	4422273	4423231	959	942	373	0.5116772823779193	.	UCACACUUUUGUCUCGCAAGUCGUUGGCG	89	53	751	4	20	60	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4423706-4424118	Cluster_52	Pocillopora_meandrina_HIv1___Sc0000000	4423706	4424118	413	128	59	0.5546875	.	UUAUAAGGAUCUUAAGGCGAAUAAAGCA	30	7	63	13	5	24	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4429481-4429904	Cluster_53	Pocillopora_meandrina_HIv1___Sc0000000	4429481	4429904	424	200	87	0.965	+	UCAAAAGCUGCCGAUAAAUCUAAA	54	2	128	1	3	1	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4429917-4430343	Cluster_54	Pocillopora_meandrina_HIv1___Sc0000000	4429917	4430343	427	147	71	0.8707482993197279	+	UCAGACUAGCAACAUGAUCUUCGGUGA	23	4	131	3	1	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4430717-4431144	Cluster_55	Pocillopora_meandrina_HIv1___Sc0000000	4430717	4431144	428	408	126	0.9362745098039216	+	UGUACAAGGUCGAAAGAAUCCAGGAUA	150	3	374	0	0	7	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4431213-4432144	Cluster_56	Pocillopora_meandrina_HIv1___Sc0000000	4431213	4432144	932	994	333	0.9587525150905433	+	UAAUGACUUCAGAGUAGACAGAGACGGU	66	9	959	4	6	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4528179-4528608	Cluster_57	Pocillopora_meandrina_HIv1___Sc0000000	4528179	4528608	430	140	42	0.02857142857142857	-	UCUAUGAUCUUAUAAUGCGACAGUAUGAUU	33	0	138	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4531785-4532259	Cluster_58	Pocillopora_meandrina_HIv1___Sc0000000	4531785	4532259	475	1077	309	0.0018570102135561746	-	CCUUAGUGAUGAUAGAAGAUGCCGC	45	179	496	97	101	92	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4532302-4532705	Cluster_59	Pocillopora_meandrina_HIv1___Sc0000000	4532302	4532705	404	140	97	0.007142857142857143	-	CAAGAGUGAAACUGGAUGGUC	4	35	43	17	18	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4534325-4534799	Cluster_60	Pocillopora_meandrina_HIv1___Sc0000000	4534325	4534799	475	4303	627	0.0	-	AAAGUUUGAUUGAGAUGACAAAUAUUUCUG	369	475	2846	198	204	221	359	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4561521-4561940	Cluster_61	Pocillopora_meandrina_HIv1___Sc0000000	4561521	4561940	420	124	46	0.0	-	GUUCCGGGGAACUUGCCGUU	26	53	1	27	25	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4565452-4566337	Cluster_62	Pocillopora_meandrina_HIv1___Sc0000000	4565452	4566337	886	681	300	0.09104258443465492	-	UUAUAGCAAACAAAUACAUCAUCCUGGA	54	4	632	3	9	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4595761-4596189	Cluster_63	Pocillopora_meandrina_HIv1___Sc0000000	4595761	4596189	429	230	117	0.808695652173913	+	UGAUCCGACGAAUAUUAUAAAUGUAAUAA	15	1	218	0	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4616213-4616640	Cluster_64	Pocillopora_meandrina_HIv1___Sc0000000	4616213	4616640	428	187	70	0.6203208556149733	.	UCGAUUCCACCGAAAGAAAUAACCUGUG	40	7	159	9	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4754952-4755436	Cluster_65	Pocillopora_meandrina_HIv1___Sc0000000	4754952	4755436	485	21404	200	4.6720239207624744e-05	-	GUAGUCGUGGCCGAGUGG	11565	21040	53	105	45	65	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4905179-4905815	Cluster_66	Pocillopora_meandrina_HIv1___Sc0000000	4905179	4905815	637	248	146	0.7096774193548387	.	UGCAAUUGCGUGAUUUAAGUAAAAUGUUC	10	19	192	4	2	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5011888-5012317	Cluster_67	Pocillopora_meandrina_HIv1___Sc0000000	5011888	5012317	430	248	46	0.9919354838709677	+	UGAUCAAUUUGUGAAUGUCUGCACACCACU	95	0	245	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5113409-5113821	Cluster_68	Pocillopora_meandrina_HIv1___Sc0000000	5113409	5113821	413	173	91	0.9595375722543352	+	UGCGAAUCUGAAAAUUGGACGGAGAGC	25	2	163	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5114051-5114478	Cluster_69	Pocillopora_meandrina_HIv1___Sc0000000	5114051	5114478	428	248	121	0.9475806451612904	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	29	0	230	0	4	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5114800-5115279	Cluster_70	Pocillopora_meandrina_HIv1___Sc0000000	5114800	5115279	480	338	129	0.9349112426035503	+	UCCAAUCACACACAGUUCUCCUGCGGC	75	2	326	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5115363-5116638	Cluster_71	Pocillopora_meandrina_HIv1___Sc0000000	5115363	5116638	1276	2547	550	0.939536709854731	+	UAGGCAUUUGUCAGCAUUGAGAGUUAAG	436	15	2417	5	10	34	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5116660-5117931	Cluster_72	Pocillopora_meandrina_HIv1___Sc0000000	5116660	5117931	1272	1241	506	0.9186140209508461	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	88	15	1179	4	5	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5237977-5238405	Cluster_73	Pocillopora_meandrina_HIv1___Sc0000000	5237977	5238405	429	378	40	0.0	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	276	0	374	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5304149-5304689	Cluster_74	Pocillopora_meandrina_HIv1___Sc0000000	5304149	5304689	541	1302	421	1.0	+	GUGCCUUGAAACUAUCUCUACUGUUCA	233	201	817	69	90	46	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5624826-5625249	Cluster_75	Pocillopora_meandrina_HIv1___Sc0000000	5624826	5625249	424	122	16	1.0	+	UUUGAACUCCUAAGAUCUGAUUGU	79	1	5	1	1	2	112	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5723088-5723491	Cluster_76	Pocillopora_meandrina_HIv1___Sc0000000	5723088	5723491	404	77	29	0.09090909090909091	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	25	1	74	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5724791-5725218	Cluster_77	Pocillopora_meandrina_HIv1___Sc0000000	5724791	5725218	428	211	74	0.004739336492890996	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	35	1	204	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6035687-6037539	Cluster_78	Pocillopora_meandrina_HIv1___Sc0000000	6035687	6037539	1853	18308	2693	0.10093948000873935	-	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3198	299	16150	221	91	214	1333	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6038529-6040210	Cluster_79	Pocillopora_meandrina_HIv1___Sc0000000	6038529	6040210	1682	2106	840	0.8205128205128205	+	UCUAACGCGUUUGUCUGACAUCCCUUU	146	46	1872	15	46	32	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6054442-6055284	Cluster_80	Pocillopora_meandrina_HIv1___Sc0000000	6054442	6055284	843	2385	244	0.9949685534591195	+	UCCUCUUGGUAAGACAUAGUUCUGUAAACUU	610	6	2366	3	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6072276-6072713	Cluster_81	Pocillopora_meandrina_HIv1___Sc0000000	6072276	6072713	438	7612	781	0.9978980557015239	+	AUGUGAUUUCUGCCCAGUGCUCU	280	2719	1367	1014	860	1077	575	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6175141-6175559	Cluster_82	Pocillopora_meandrina_HIv1___Sc0000000	6175141	6175559	419	161	22	1.0	+	CUCUGUCUCUGUCCGUGU	48	161	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6300017-6300437	Cluster_83	Pocillopora_meandrina_HIv1___Sc0000000	6300017	6300437	421	269	83	0.6840148698884758	.	AUCGAUCGCGUUUCUCUUGC	76	210	4	51	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6432068-6432496	Cluster_84	Pocillopora_meandrina_HIv1___Sc0000000	6432068	6432496	429	1165	150	0.9991416309012876	+	UCAGCUCUUUCUAACUCUGCAAUUUGAG	287	0	1155	2	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6432523-6433169	Cluster_85	Pocillopora_meandrina_HIv1___Sc0000000	6432523	6433169	647	747	276	0.8821954484605087	+	UGAAAUACUUGUUCUUUUCCCUGGUUUGCC	89	4	695	9	6	5	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6523200-6523626	Cluster_86	Pocillopora_meandrina_HIv1___Sc0000000	6523200	6523626	427	80	22	0.9875	+	UGCGACAAACGAAGAGUAGAAAGUUUCUAC	43	1	70	3	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6781587-6782077	Cluster_87	Pocillopora_meandrina_HIv1___Sc0000000	6781587	6782077	491	498	289	1.0	+	CUUCGUUGAGAAUAGACGCCUGA	9	105	201	57	51	43	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6784342-6785024	Cluster_88	Pocillopora_meandrina_HIv1___Sc0000000	6784342	6785024	683	1446	623	0.9986168741355463	+	GAAGAGAAAAAGAACUCGUUGCU	105	309	453	210	117	269	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6785838-6786298	Cluster_89	Pocillopora_meandrina_HIv1___Sc0000000	6785838	6786298	461	270	127	1.0	+	CUUGAAGAAAGACUGGUCUCCA	27	101	51	22	61	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6786579-6787211	Cluster_90	Pocillopora_meandrina_HIv1___Sc0000000	6786579	6787211	633	1003	594	0.9990029910269193	+	GACGACAACGAGCUCGGU	16	231	454	95	60	72	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6820857-6821266	Cluster_91	Pocillopora_meandrina_HIv1___Sc0000000	6820857	6821266	410	154	112	1.0	+	GAUGUGCGACGACCUCUGAGGAACA	6	46	50	21	17	15	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6863950-6864369	Cluster_92	Pocillopora_meandrina_HIv1___Sc0000000	6863950	6864369	420	183	116	1.0	+	CUUGUGUCAACUAAACUCCAACA	9	30	82	21	15	30	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6905074-6905503	Cluster_93	Pocillopora_meandrina_HIv1___Sc0000000	6905074	6905503	430	476	110	0.037815126050420166	-	AUCUUCUGAAUCAAGAAAAAAGAGGCUGG	157	3	463	0	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6905904-6906371	Cluster_94	Pocillopora_meandrina_HIv1___Sc0000000	6905904	6906371	468	3527	154	0.0031187978451942162	-	GAUCCAACAAGAACAAUAUGUGCUGACUA	1181	0	3525	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7029852-7030270	Cluster_95	Pocillopora_meandrina_HIv1___Sc0000000	7029852	7030270	419	1928	73	0.0025933609958506223	-	CCUCUACUUGACCUCAUU	1325	1928	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7039343-7040274	Cluster_96	Pocillopora_meandrina_HIv1___Sc0000000	7039343	7040274	932	3401	599	0.0	-	CAGGGGCCAUCUGAUGGAU	266	1043	1725	138	163	153	179	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7040841-7041266	Cluster_97	Pocillopora_meandrina_HIv1___Sc0000000	7040841	7041266	426	195	89	0.005128205128205128	-	AUGCAGUGAUGCUUUGAAUUUCUUCACCUGA	15	21	98	7	6	32	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7041283-7041776	Cluster_98	Pocillopora_meandrina_HIv1___Sc0000000	7041283	7041776	494	2820	358	0.0	-	GCUGGAUGAUGAGACUUUGCGAAGGU	305	850	984	200	219	278	289	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7041807-7042290	Cluster_99	Pocillopora_meandrina_HIv1___Sc0000000	7041807	7042290	484	2986	388	0.0	-	CUGAAUGAAAACAGAGUCUGAGCAGU	432	676	1242	154	263	254	397	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7042332-7042805	Cluster_100	Pocillopora_meandrina_HIv1___Sc0000000	7042332	7042805	474	515	119	0.0	-	CUGGAAUGAUGAAUAAUCC	30	176	261	13	23	10	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7100067-7100478	Cluster_101	Pocillopora_meandrina_HIv1___Sc0000000	7100067	7100478	412	292	206	0.9931506849315068	+	GUGGACUGAGCUUAAAUAGU	13	87	89	31	27	23	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7205683-7206107	Cluster_102	Pocillopora_meandrina_HIv1___Sc0000000	7205683	7206107	425	1021	73	1.0	+	UUGCGUUGCACAUGUGAACUAGGC	282	23	81	72	56	373	416	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7584506-7585242	Cluster_103	Pocillopora_meandrina_HIv1___Sc0000000	7584506	7585242	737	3801	555	0.9794790844514601	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	739	11	3735	2	2	7	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7586366-7586860	Cluster_104	Pocillopora_meandrina_HIv1___Sc0000000	7586366	7586860	495	542	240	0.7324723247232472	.	UGAAUCCACCACACUUGAAUUUAGACCC	43	14	466	10	13	6	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7587279-7588109	Cluster_105	Pocillopora_meandrina_HIv1___Sc0000000	7587279	7588109	831	411	212	0.9367396593673966	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	23	6	384	2	5	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7588484-7588910	Cluster_106	Pocillopora_meandrina_HIv1___Sc0000000	7588484	7588910	427	289	126	0.903114186851211	+	UCCAAUCACACACAGUUCUCCUGCGGC	71	1	270	2	1	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7588994-7589421	Cluster_107	Pocillopora_meandrina_HIv1___Sc0000000	7588994	7589421	428	126	46	0.9047619047619048	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	60	1	118	0	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7590291-7590718	Cluster_108	Pocillopora_meandrina_HIv1___Sc0000000	7590291	7590718	428	250	149	0.92	+	UCAGAUCUUCCCAUGUACAUUCAUCGA	21	1	239	0	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7590805-7592205	Cluster_109	Pocillopora_meandrina_HIv1___Sc0000000	7590805	7592205	1401	3067	940	0.8532768177372024	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	100	32	2866	14	20	32	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7592666-7593548	Cluster_110	Pocillopora_meandrina_HIv1___Sc0000000	7592666	7593548	883	4556	764	0.8470149253731343	+	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	622	20	4339	39	11	58	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7593750-7594802	Cluster_111	Pocillopora_meandrina_HIv1___Sc0000000	7593750	7594802	1053	4955	1095	0.9144298688193744	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	467	60	4619	23	26	88	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7594848-7595397	Cluster_112	Pocillopora_meandrina_HIv1___Sc0000000	7594848	7595397	550	4263	571	0.5880835092657752	.	ACAAGACAGAAUUCCAGCUGAUACAGA	546	52	3941	5	38	89	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7596727-7597157	Cluster_113	Pocillopora_meandrina_HIv1___Sc0000000	7596727	7597157	431	952	100	0.008403361344537815	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	572	3	926	2	3	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7597814-7598223	Cluster_114	Pocillopora_meandrina_HIv1___Sc0000000	7597814	7598223	410	90	44	0.24444444444444444	.	AAUAGUCUCUUAGAAUUCCAUCAUUUG	12	0	88	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7598683-7600443	Cluster_115	Pocillopora_meandrina_HIv1___Sc0000000	7598683	7600443	1761	2228	735	0.22755834829443447	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	104	17	2063	9	5	40	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7600922-7601349	Cluster_116	Pocillopora_meandrina_HIv1___Sc0000000	7600922	7601349	428	151	66	0.019867549668874173	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	23	4	144	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7601404-7602141	Cluster_117	Pocillopora_meandrina_HIv1___Sc0000000	7601404	7602141	738	1198	337	0.0667779632721202	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	141	5	1135	3	9	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7609392-7609809	Cluster_118	Pocillopora_meandrina_HIv1___Sc0000000	7609392	7609809	418	99	54	0.98989898989899	+	UGACGAUUUUCGCGGCUCGAUUUUGU	9	0	98	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7656753-7658490	Cluster_119	Pocillopora_meandrina_HIv1___Sc0000000	7656753	7658490	1738	2768	1082	0.037210982658959536	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	88	14	2634	6	20	47	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7697508-7697937	Cluster_120	Pocillopora_meandrina_HIv1___Sc0000000	7697508	7697937	430	351	33	1.0	+	UAGAGUGUCAAACCACGAUGGAUGAUGAUC	197	1	341	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8103238-8103666	Cluster_121	Pocillopora_meandrina_HIv1___Sc0000000	8103238	8103666	429	269	35	1.0	+	AUAUUUACGACGAGGAGGAACGAUUUGAA	107	2	265	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8155944-8156371	Cluster_122	Pocillopora_meandrina_HIv1___Sc0000000	8155944	8156371	428	85	15	0.9764705882352941	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	0	84	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8246882-8247297	Cluster_123	Pocillopora_meandrina_HIv1___Sc0000000	8246882	8247297	416	133	52	0.0	-	UGAUCUUCAGAACUUCCUAUAUCAAAGAGGC	16	1	129	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8310086-8310514	Cluster_124	Pocillopora_meandrina_HIv1___Sc0000000	8310086	8310514	429	206	49	0.019417475728155338	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	85	0	203	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8311015-8312237	Cluster_125	Pocillopora_meandrina_HIv1___Sc0000000	8311015	8312237	1223	1630	285	0.06748466257668712	-	UCUAUCCCACCUGUAAUGAAAAAAUCUUUG	548	10	1581	13	1	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8426708-8427191	Cluster_126	Pocillopora_meandrina_HIv1___Sc0000000	8426708	8427191	484	346	142	0.0	-	UGUGUAGUAAACGCCAGAAACAUGA	20	60	128	41	28	36	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8427562-8428099	Cluster_127	Pocillopora_meandrina_HIv1___Sc0000000	8427562	8428099	538	816	263	0.0012254901960784314	-	UCUCACCUUGAAACUGGAAUGGCAAGCUU	158	90	549	33	28	49	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8608677-8609097	Cluster_128	Pocillopora_meandrina_HIv1___Sc0000000	8608677	8609097	421	399	65	0.9974937343358395	+	AAGAAAGAAGACCCUGGGAAU	118	195	7	167	13	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8734505-8734915	Cluster_129	Pocillopora_meandrina_HIv1___Sc0000000	8734505	8734915	411	203	146	0.0	-	CCUCAAGGACGUGCAGGAU	7	57	96	16	13	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8743606-8744021	Cluster_130	Pocillopora_meandrina_HIv1___Sc0000000	8743606	8744021	416	276	184	0.007246376811594203	-	GACGUGAAAAAGAACGAGGA	10	57	139	22	20	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8940693-8941187	Cluster_131	Pocillopora_meandrina_HIv1___Sc0000000	8940693	8941187	495	1992	287	0.18473895582329317	-	UCGACAACUUUCAGCCACAAAUCGUGCA	451	78	1727	30	17	99	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9256539-9256969	Cluster_132	Pocillopora_meandrina_HIv1___Sc0000000	9256539	9256969	431	624	109	0.052884615384615384	-	UUAACCGUUAUAGUUUUGACUUGAAUAU	113	2	543	2	47	0	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9257154-9257837	Cluster_133	Pocillopora_meandrina_HIv1___Sc0000000	9257154	9257837	684	3737	409	0.035054856837035055	-	CUGUGAACGAUGCCCUAGAUGUGGA	737	88	2879	47	236	270	217	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9265055-9265482	Cluster_134	Pocillopora_meandrina_HIv1___Sc0000000	9265055	9265482	428	316	75	0.9272151898734177	+	UAUGAUAUCACUGUGGAGCGAGG	90	12	142	5	6	122	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9279901-9280374	Cluster_135	Pocillopora_meandrina_HIv1___Sc0000000	9279901	9280374	474	509	149	0.9980353634577603	+	UUCCAAUGAUGAGGCAAAUCCAACUCU	63	61	389	15	14	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9284299-9284771	Cluster_136	Pocillopora_meandrina_HIv1___Sc0000000	9284299	9284771	473	547	165	0.9981718464351006	+	UUUCAGUGAUGAGUCAAAUCCAACUCCUAUU	69	65	357	23	51	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9285767-9286194	Cluster_137	Pocillopora_meandrina_HIv1___Sc0000000	9285767	9286194	428	253	47	1.0	+	GGAAUAAUAAUCGUGAUAACUGAGGAAU	86	31	192	6	6	13	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9286598-9287030	Cluster_138	Pocillopora_meandrina_HIv1___Sc0000000	9286598	9287030	433	762	167	1.0	+	GAAACUGUAACUGACUGAGGAAA	133	95	310	73	81	162	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9440859-9441685	Cluster_139	Pocillopora_meandrina_HIv1___Sc0000000	9440859	9441685	827	86494	3559	0.9999768770088099	+	UCCUUCCGGCCGGUCGUCGAC	10793	49001	5570	19790	6683	3590	1860	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9460512-9460942	Cluster_140	Pocillopora_meandrina_HIv1___Sc0000000	9460512	9460942	431	895	160	1.0	+	AACGAAAGUAAUGAGAUGGAGCUGAUA	230	3	877	2	5	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9465183-9465611	Cluster_141	Pocillopora_meandrina_HIv1___Sc0000000	9465183	9465611	429	588	53	0.9931972789115646	+	GGGGUGGACACUGUUUCGGAGAAGACUGC	140	26	522	3	30	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9797403-9798671	Cluster_142	Pocillopora_meandrina_HIv1___Sc0000000	9797403	9798671	1269	3451	658	0.09852216748768473	-	UGCGUGUAGAGGUAACUAAAGUCCCUUU	400	160	3077	23	35	83	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9799673-9800082	Cluster_143	Pocillopora_meandrina_HIv1___Sc0000000	9799673	9800082	410	88	30	0.2159090909090909	.	UGUUACAAAACCAUUAGAACUAUCAGUU	25	1	71	1	1	0	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9800095-9800630	Cluster_144	Pocillopora_meandrina_HIv1___Sc0000000	9800095	9800630	536	178	78	0.07303370786516854	-	UGCAUGUGCUUUGUCUUGGAUUUCAU	17	3	167	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9800682-9801089	Cluster_145	Pocillopora_meandrina_HIv1___Sc0000000	9800682	9801089	408	87	24	0.16091954022988506	-	UGUGAAUCAAUGGCUGAACUUUCCUUAUA	24	1	80	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9803046-9803772	Cluster_146	Pocillopora_meandrina_HIv1___Sc0000000	9803046	9803772	727	371	137	0.05121293800539083	-	UCACUGAUGUCGGAUGUCUGAGAUGCAUC	63	5	356	3	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9828155-9828582	Cluster_147	Pocillopora_meandrina_HIv1___Sc0000000	9828155	9828582	428	160	33	0.05625	-	UUGAUCUCUAUGGUUUGAAAGGUUAUGG	64	8	148	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9842834-9843262	Cluster_148	Pocillopora_meandrina_HIv1___Sc0000000	9842834	9843262	429	116	30	0.0	-	UCUAAGACAAUAAUUGGUACUGCAACGAGU	31	1	115	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9853254-9853662	Cluster_149	Pocillopora_meandrina_HIv1___Sc0000000	9853254	9853662	409	146	91	0.02054794520547945	-	UGUGAGCUUGUGGCUUCAUUACUGUGG	6	2	135	0	1	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9853689-9856016	Cluster_150	Pocillopora_meandrina_HIv1___Sc0000000	9853689	9856016	2328	16528	2068	0.013552758954501452	-	UAAUUCUUCCUUGAGCUGUGUUUUAAGA	952	48	16099	30	137	72	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9856063-9856639	Cluster_151	Pocillopora_meandrina_HIv1___Sc0000000	9856063	9856639	577	1165	340	0.06094420600858369	-	UGUUUCUGCGGUACGUGUCACCAUUGGC	105	14	1075	7	4	19	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9857383-9857809	Cluster_152	Pocillopora_meandrina_HIv1___Sc0000000	9857383	9857809	427	109	50	0.08256880733944955	-	UGUAAUCUUCCGGUUGGUCUAGUAAACC	14	4	98	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9878202-9878692	Cluster_153	Pocillopora_meandrina_HIv1___Sc0000000	9878202	9878692	491	1189	183	0.0159798149705635	-	UCCGUUCUGUAAUUGUUUCGAAUGCCUUC	158	3	1156	0	1	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9884246-9884668	Cluster_154	Pocillopora_meandrina_HIv1___Sc0000000	9884246	9884668	423	155	42	0.0	-	UGGGAAUAUCUGGUUCUUCGUGA	68	1	40	0	0	100	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9887131-9887541	Cluster_155	Pocillopora_meandrina_HIv1___Sc0000000	9887131	9887541	411	206	95	0.009708737864077669	-	UAAUAUGUGAUGAACUUA	38	63	140	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9889894-9890324	Cluster_156	Pocillopora_meandrina_HIv1___Sc0000000	9889894	9890324	431	128	9	0.0546875	-	UCAGCUCCAUAUCUUGUUUAACAUCUUAAAC	87	0	125	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9898243-9898662	Cluster_157	Pocillopora_meandrina_HIv1___Sc0000000	9898243	9898662	420	182	80	0.14835164835164835	-	UUCGCGUCUGAAGCUGUUAG	43	80	14	18	32	36	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9903956-9904712	Cluster_158	Pocillopora_meandrina_HIv1___Sc0000000	9903956	9904712	757	623	144	0.7672552166934189	.	UGAAAAAAUCUUCUGUUAUAGACACCUGA	299	2	594	3	1	2	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9912035-9912444	Cluster_159	Pocillopora_meandrina_HIv1___Sc0000000	9912035	9912444	410	137	75	0.9051094890510949	+	UGAACUUCUUUGCUUCUCUGUUGACAGUC	15	4	128	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9912448-9913768	Cluster_160	Pocillopora_meandrina_HIv1___Sc0000000	9912448	9913768	1321	1442	565	0.8647711511789181	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	55	18	1253	14	19	17	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9913963-9914384	Cluster_161	Pocillopora_meandrina_HIv1___Sc0000000	9913963	9914384	422	169	99	0.893491124260355	+	UUGACGACUGUACGAAAGACAUCCUAAG	9	0	161	3	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9920126-9920554	Cluster_162	Pocillopora_meandrina_HIv1___Sc0000000	9920126	9920554	429	93	24	0.010752688172043012	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	62	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9924478-9924909	Cluster_163	Pocillopora_meandrina_HIv1___Sc0000000	9924478	9924909	432	383	147	0.06005221932114883	-	UUGGUGUGUUCAAGUAUCUUUGAUUCU	24	1	370	3	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9931069-9932750	Cluster_164	Pocillopora_meandrina_HIv1___Sc0000000	9931069	9932750	1682	2020	782	0.1801980198019802	-	UCUAACGCGUUUGUCUGACAUCCCUUU	136	35	1803	16	44	27	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9933736-9935597	Cluster_165	Pocillopora_meandrina_HIv1___Sc0000000	9933736	9935597	1862	18950	2762	0.8973087071240106	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3215	345	16679	218	102	291	1315	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10052622-10053049	Cluster_166	Pocillopora_meandrina_HIv1___Sc0000000	10052622	10053049	428	395	78	0.10126582278481013	-	UGUAAUCGCAUGUAGUUGCUUCUGUCUC	108	24	337	12	2	20	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10181669-10182095	Cluster_167	Pocillopora_meandrina_HIv1___Sc0000000	10181669	10182095	427	177	47	0.011299435028248588	-	UGGGUUGACUGAAUUUGUGAGGAAGCUG	28	0	163	0	0	13	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10361747-10362173	Cluster_168	Pocillopora_meandrina_HIv1___Sc0000000	10361747	10362173	427	188	73	0.9893617021276596	+	UACAAACAACAGAACGUUCGAACGGCU	37	3	181	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10377199-10381489	Cluster_169	Pocillopora_meandrina_HIv1___Sc0000000	10377199	10381489	4291	12435	3687	0.9251306795335746	+	UGACUCUUCAAUCUCUGAAACGACUGCUC	497	124	11502	47	77	250	435	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10424158-10424581	Cluster_170	Pocillopora_meandrina_HIv1___Sc0000000	10424158	10424581	424	119	11	1.0	+	UUAACUGGUAGUCAUGACGUCUCC	48	9	8	2	0	0	100	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10531079-10531491	Cluster_171	Pocillopora_meandrina_HIv1___Sc0000000	10531079	10531491	413	140	78	0.12857142857142856	-	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	9	1	126	0	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10531934-10532626	Cluster_172	Pocillopora_meandrina_HIv1___Sc0000000	10531934	10532626	693	473	236	0.30655391120507397	.	UGAGAUCUUUUUAGCUUGAGUUUGUUGA	23	6	409	3	5	18	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10532826-10533250	Cluster_173	Pocillopora_meandrina_HIv1___Sc0000000	10532826	10533250	425	129	74	0.14728682170542637	-	UGUAUUGAUUGAACUUGUCGGUUGACC	11	0	115	0	0	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10534041-10534763	Cluster_174	Pocillopora_meandrina_HIv1___Sc0000000	10534041	10534763	723	302	168	0.09933774834437085	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	16	0	291	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10540694-10541121	Cluster_175	Pocillopora_meandrina_HIv1___Sc0000000	10540694	10541121	428	84	26	0.9761904761904762	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	23	0	81	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10543779-10544200	Cluster_176	Pocillopora_meandrina_HIv1___Sc0000000	10543779	10544200	422	202	120	0.8316831683168316	+	UACUGAUAGUGAAACUGCUCCUUGAACCUC	12	3	191	0	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10544222-10544652	Cluster_177	Pocillopora_meandrina_HIv1___Sc0000000	10544222	10544652	431	351	166	0.9629629629629629	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	22	5	335	3	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10553046-10553473	Cluster_178	Pocillopora_meandrina_HIv1___Sc0000000	10553046	10553473	428	167	36	0.005988023952095809	-	UGGGUUGACUGAAUUUGUGAGGAAGCUG	32	1	149	1	0	16	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10685159-10685850	Cluster_179	Pocillopora_meandrina_HIv1___Sc0000000	10685159	10685850	692	842	191	0.010688836104513063	-	UGUACUGAACUCUACCAGCGAA	302	21	476	13	304	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10686623-10687051	Cluster_180	Pocillopora_meandrina_HIv1___Sc0000000	10686623	10687051	429	367	74	0.9264305177111717	+	CCGUGUCUUAAGAAACAAAGUUGU	93	4	198	0	0	19	146	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10707707-10708135	Cluster_181	Pocillopora_meandrina_HIv1___Sc0000000	10707707	10708135	429	272	60	0.01838235294117647	-	UCUAAUGCAGUGGCACAGAACCUCGGGGA	70	2	264	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10714524-10714951	Cluster_182	Pocillopora_meandrina_HIv1___Sc0000000	10714524	10714951	428	259	137	0.023166023166023165	-	UGGACAAGUCUGAUGGUGUAUUACCGAGUC	19	35	218	0	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10734393-10734814	Cluster_183	Pocillopora_meandrina_HIv1___Sc0000000	10734393	10734814	422	72	14	1.0	+	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	34	0	68	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10786268-10787812	Cluster_184	Pocillopora_meandrina_HIv1___Sc0000000	10786268	10787812	1545	2226	650	0.9739442946990117	+	UGUACGCGUGGAUCAUCUUGUUGAGUG	137	20	2057	10	10	78	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10788018-10788448	Cluster_185	Pocillopora_meandrina_HIv1___Sc0000000	10788018	10788448	431	745	243	0.9221476510067114	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	130	23	641	17	4	15	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10789450-10790491	Cluster_186	Pocillopora_meandrina_HIv1___Sc0000000	10789450	10790491	1042	824	355	0.9635922330097088	+	UAACAUCUCUCUUUCCGACUUUAACAGC	45	5	792	4	2	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10790631-10792235	Cluster_187	Pocillopora_meandrina_HIv1___Sc0000000	10790631	10792235	1605	1638	736	0.8772893772893773	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	108	21	1466	15	16	35	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10804971-10805394	Cluster_188	Pocillopora_meandrina_HIv1___Sc0000000	10804971	10805394	424	112	57	1.0	+	UCAUUAGUCUGGACAUGCCCUGACAUCUCC	15	0	109	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10806850-10808466	Cluster_189	Pocillopora_meandrina_HIv1___Sc0000000	10806850	10808466	1617	4575	1086	0.8260109289617487	+	UGUGACUGUUAAAGAUACCUAGGAGUG	362	49	4008	22	22	159	315	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10811914-10812348	Cluster_190	Pocillopora_meandrina_HIv1___Sc0000000	10811914	10812348	435	342	162	0.5321637426900585	.	AUACACUAUAGGCGGUGACAAGCAACCAAC	21	7	319	0	2	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10812967-10813462	Cluster_191	Pocillopora_meandrina_HIv1___Sc0000000	10812967	10813462	496	6192	347	0.9948320413436692	+	UGAGACGAAACCCGACUACAGAAUAGCU	1539	13	5987	5	8	8	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10856559-10857208	Cluster_192	Pocillopora_meandrina_HIv1___Sc0000000	10856559	10857208	650	1247	224	0.7882919005613472	.	UGCAUGACAAUUUUGGAGGAGAACCACCCA	428	28	1176	10	10	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10906504-10906934	Cluster_193	Pocillopora_meandrina_HIv1___Sc0000000	10906504	10906934	431	609	105	0.9819376026272578	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	233	8	594	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11008650-11009079	Cluster_194	Pocillopora_meandrina_HIv1___Sc0000000	11008650	11009079	430	323	31	1.0	+	UGACUGUGCUAAGUCAUUUGCUGCAAAUGA	142	1	311	1	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11039301-11039720	Cluster_195	Pocillopora_meandrina_HIv1___Sc0000000	11039301	11039720	420	172	5	1.0	+	AGAAGUGGAAAGAAAAUUUU	143	172	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11041565-11043456	Cluster_196	Pocillopora_meandrina_HIv1___Sc0000000	11041565	11043456	1892	1612	645	0.9466501240694789	+	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	156	22	1498	3	15	22	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11043472-11043898	Cluster_197	Pocillopora_meandrina_HIv1___Sc0000000	11043472	11043898	427	195	99	0.9179487179487179	+	UGAACUUCUCGGCUCCAAACACUAUGG	50	3	182	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11044016-11044443	Cluster_198	Pocillopora_meandrina_HIv1___Sc0000000	11044016	11044443	428	322	158	0.8633540372670807	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	50	8	297	1	2	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11044450-11046447	Cluster_199	Pocillopora_meandrina_HIv1___Sc0000000	11044450	11046447	1998	4109	1417	0.8963251399367242	+	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	345	28	3842	29	30	49	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11056292-11056715	Cluster_200	Pocillopora_meandrina_HIv1___Sc0000000	11056292	11056715	424	79	34	1.0	+	UUACUCCGACACUCCGAUAUGUGAUACU	10	2	72	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11067582-11068009	Cluster_201	Pocillopora_meandrina_HIv1___Sc0000000	11067582	11068009	428	150	65	0.98	+	UAUCAAGUAGAGAUGUCUGAGCCCGAUG	17	3	144	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11068926-11069353	Cluster_202	Pocillopora_meandrina_HIv1___Sc0000000	11068926	11069353	428	212	94	0.9245283018867925	+	UGUUCUUGUAGUCUUUUAACAGCUUGUU	23	1	204	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11070468-11070894	Cluster_203	Pocillopora_meandrina_HIv1___Sc0000000	11070468	11070894	427	159	80	0.8238993710691824	+	UAGUGACCGUAUCUUAAACUCCCUAUUA	42	4	145	4	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11071238-11071734	Cluster_204	Pocillopora_meandrina_HIv1___Sc0000000	11071238	11071734	497	506	197	0.8972332015810277	+	UGAAAUAACUAAGUCCAGAAUAUUCUGAUU	26	3	479	0	2	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11077717-11078219	Cluster_205	Pocillopora_meandrina_HIv1___Sc0000000	11077717	11078219	503	232	93	0.9396551724137931	+	UGAAUAGUGUGUAUAUUGAAAGGUCUCGGUC	41	1	218	4	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11489850-11490268	Cluster_206	Pocillopora_meandrina_HIv1___Sc0000000	11489850	11490268	419	80	24	0.0	-	GACGGACUGGGAGAGCUCG	11	26	33	3	10	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11542819-11544140	Cluster_207	Pocillopora_meandrina_HIv1___Sc0000000	11542819	11544140	1322	1487	494	0.9219905850706119	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	107	16	1403	3	5	21	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11544360-11545816	Cluster_208	Pocillopora_meandrina_HIv1___Sc0000000	11544360	11545816	1457	1547	688	0.7362637362637363	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	95	14	1401	11	11	29	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11552655-11555296	Cluster_209	Pocillopora_meandrina_HIv1___Sc0000000	11552655	11555296	2642	8888	1861	0.9932493249324933	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1297	17	8687	20	32	39	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11557735-11558203	Cluster_210	Pocillopora_meandrina_HIv1___Sc0000000	11557735	11558203	469	237	88	0.9873417721518988	+	UUCAUAUCUAGUAUCAUUCUGAAAAUUAUU	21	0	229	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11558679-11559293	Cluster_211	Pocillopora_meandrina_HIv1___Sc0000000	11558679	11559293	615	559	166	0.9928443649373881	+	UGAUUGAAACUUGAAGAAGAGCUUGUAAC	64	7	547	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11559941-11560372	Cluster_212	Pocillopora_meandrina_HIv1___Sc0000000	11559941	11560372	432	502	120	0.9920318725099602	+	UGUAAUCUAGAUCUUUGCUUGUAUCGGCAC	95	2	494	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11561257-11561730	Cluster_213	Pocillopora_meandrina_HIv1___Sc0000000	11561257	11561730	474	527	211	0.9981024667931688	+	UCACACGUGCUUGAACUUGUCUUUUAAGGA	30	1	512	0	8	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11566070-11566661	Cluster_214	Pocillopora_meandrina_HIv1___Sc0000000	11566070	11566661	592	616	202	1.0	+	UAUUGUUUGCAAAAAGCUCUCUUGACUGC	85	3	590	2	2	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11566681-11567858	Cluster_215	Pocillopora_meandrina_HIv1___Sc0000000	11566681	11567858	1178	3016	554	0.98342175066313	+	UAGAGCUCUUGUUUUUUCCACACCAAUA	442	14	2910	6	9	22	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11568056-11570378	Cluster_216	Pocillopora_meandrina_HIv1___Sc0000000	11568056	11570378	2323	43923	3298	0.9939439473624297	+	UGGAAACAUCUUCUCUGCCAAUUCCCAUU	2450	359	40689	136	603	1553	583	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11574178-11574789	Cluster_217	Pocillopora_meandrina_HIv1___Sc0000000	11574178	11574789	612	751	323	0.8988015978695073	+	UCAUCAUAGCUGUCUUUCUCUGCAGAGC	49	15	679	6	9	13	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11575547-11575948	Cluster_218	Pocillopora_meandrina_HIv1___Sc0000000	11575547	11575948	402	269	171	0.516728624535316	.	UGCAUCGCGUUGGAAUUUUUAUUAGAGC	16	14	228	11	5	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11576454-11577454	Cluster_219	Pocillopora_meandrina_HIv1___Sc0000000	11576454	11577454	1001	1271	566	0.3430369787568843	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	61	11	1135	13	9	36	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11580662-11581090	Cluster_220	Pocillopora_meandrina_HIv1___Sc0000000	11580662	11581090	429	183	37	1.0	+	UGAGAAGUACAAGCUAUAGAGGACUGUUG	62	2	180	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11583909-11584334	Cluster_221	Pocillopora_meandrina_HIv1___Sc0000000	11583909	11584334	426	83	32	1.0	+	UUUAUCCCAACUGGUUACAGGACAUCC	20	0	82	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11584630-11585077	Cluster_222	Pocillopora_meandrina_HIv1___Sc0000000	11584630	11585077	448	383	120	1.0	+	UGGGUGUUGUUCCUGACUCCAAGGGAAGUG	54	2	367	1	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11587332-11587855	Cluster_223	Pocillopora_meandrina_HIv1___Sc0000000	11587332	11587855	524	562	273	0.9217081850533808	+	UGUUUGUCAACCGUUGCUUGUGUCCAUU	23	5	499	6	6	27	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11588495-11588921	Cluster_224	Pocillopora_meandrina_HIv1___Sc0000000	11588495	11588921	427	328	174	0.9878048780487805	+	UCGCUUCCAAAGGCUUGUGGUCAGAUU	18	1	305	1	8	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11589851-11590275	Cluster_225	Pocillopora_meandrina_HIv1___Sc0000000	11589851	11590275	425	203	88	0.9408866995073891	+	UACGAUCAGGAUUGUCCACCACACAGA	45	2	180	4	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11590457-11591141	Cluster_226	Pocillopora_meandrina_HIv1___Sc0000000	11590457	11591141	685	1280	488	0.9625	+	UGGGAUGUUUAUCGGGAUUUGUACCAGAU	45	10	1195	5	5	18	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11594639-11595518	Cluster_227	Pocillopora_meandrina_HIv1___Sc0000000	11594639	11595518	880	4238	470	0.9936290703161869	+	UCUUCAUUAGGCUUACUGAACUUGACGA	617	19	4149	3	13	14	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11597439-11597857	Cluster_228	Pocillopora_meandrina_HIv1___Sc0000000	11597439	11597857	419	225	114	1.0	+	UACAUAGUGUUCUGUUCCCUUUAUAGGAC	14	0	223	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11610279-11610705	Cluster_229	Pocillopora_meandrina_HIv1___Sc0000000	11610279	11610705	427	226	52	0.995575221238938	+	UGUUUGUAGGGGCCGAAUGUUUGUGCU	36	0	220	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11611076-11611579	Cluster_230	Pocillopora_meandrina_HIv1___Sc0000000	11611076	11611579	504	647	110	0.9984544049459042	+	UUCCUGUACUGAUUUCCUCAUGUCUUCUGC	141	4	638	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11612226-11612654	Cluster_231	Pocillopora_meandrina_HIv1___Sc0000000	11612226	11612654	429	271	70	0.992619926199262	+	UUCAACACAUUUUCUUAGUAGUUCUGGGU	88	2	260	0	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11615893-11616321	Cluster_232	Pocillopora_meandrina_HIv1___Sc0000000	11615893	11616321	429	283	125	0.08480565371024736	-	UGUGUACUUACCAUAGCCUCGCUCUGGA	53	6	266	5	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11619880-11620712	Cluster_233	Pocillopora_meandrina_HIv1___Sc0000000	11619880	11620712	833	5587	892	0.8958296044388759	+	UAUUCUCUUCUUUGAUAAUGACUUUGA	891	19	5211	28	41	173	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11630399-11631228	Cluster_234	Pocillopora_meandrina_HIv1___Sc0000000	11630399	11631228	830	755	304	0.9006622516556292	+	UGUGUACUUACCAUAGCCUCGCUCUGGA	63	14	703	14	5	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11635028-11636324	Cluster_235	Pocillopora_meandrina_HIv1___Sc0000000	11635028	11636324	1297	6340	1152	0.9099369085173502	+	UGUUGUGCUUUUUGUUUGUCUUUGAAAA	832	40	5992	16	39	38	215	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11790561-11790980	Cluster_236	Pocillopora_meandrina_HIv1___Sc0000000	11790561	11790980	420	169	81	0.2958579881656805	.	GCUAAGAGGACGGGAACAUCAUUUC	14	4	146	4	7	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11794303-11794869	Cluster_237	Pocillopora_meandrina_HIv1___Sc0000000	11794303	11794869	567	925	388	0.18054054054054053	-	UAAUUUCGUGUUGCUUAAGCUGUUGAUC	91	76	755	44	14	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11798273-11798686	Cluster_238	Pocillopora_meandrina_HIv1___Sc0000000	11798273	11798686	414	124	51	0.008064516129032258	-	UGCUACAGAAGUAGAUUGUGUAAUCUGAGC	35	2	118	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11804184-11804611	Cluster_239	Pocillopora_meandrina_HIv1___Sc0000000	11804184	11804611	428	184	85	0.0	-	UGAGAUUGAUUGCCUCUGUGGUGUGGAU	31	0	180	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11812161-11812606	Cluster_240	Pocillopora_meandrina_HIv1___Sc0000000	11812161	11812606	446	241	68	0.0	-	UGAAUUCUGUCACGAGUAUUAGACUCCAC	70	0	237	3	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11813263-11815282	Cluster_241	Pocillopora_meandrina_HIv1___Sc0000000	11813263	11815282	2020	4205	1228	0.18953626634958382	-	UGAUACGAGUAGUUGGAUACAAUCUAAACU	297	91	3814	21	39	68	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11816999-11818265	Cluster_242	Pocillopora_meandrina_HIv1___Sc0000000	11816999	11818265	1267	1395	539	0.7849462365591398	.	UGUAACUGGUUCACUGCGAUUUUGUAGU	101	9	1218	6	8	47	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11818269-11818788	Cluster_243	Pocillopora_meandrina_HIv1___Sc0000000	11818269	11818788	520	929	292	0.7933261571582346	.	UGAUAUGACCUUCGGCAAAAAACUGGA	92	4	808	6	4	32	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11819696-11820119	Cluster_244	Pocillopora_meandrina_HIv1___Sc0000000	11819696	11820119	424	205	93	0.0	-	UGCAAUUCCAGUAGCUUGAGAUUUUCUGA	18	2	199	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11820158-11820585	Cluster_245	Pocillopora_meandrina_HIv1___Sc0000000	11820158	11820585	428	171	82	0.0	-	UGACUUAGCUCGCUGGCAGGAAGAGAUA	16	0	165	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11822367-11824210	Cluster_246	Pocillopora_meandrina_HIv1___Sc0000000	11822367	11824210	1844	18382	2738	0.1021107605266021	-	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3255	325	16252	200	92	222	1291	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11825210-11826891	Cluster_247	Pocillopora_meandrina_HIv1___Sc0000000	11825210	11826891	1682	2025	803	0.7995061728395062	.	UCUAACGCGUUUGUCUGACAUCCCUUU	128	44	1799	13	42	33	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11828733-11829679	Cluster_248	Pocillopora_meandrina_HIv1___Sc0000000	11828733	11829679	947	614	270	0.12052117263843648	-	UGGAUUUGCACAUUGCAGCACCAGCUGUGGC	42	9	570	5	5	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11851345-11852170	Cluster_249	Pocillopora_meandrina_HIv1___Sc0000000	11851345	11852170	826	1964	357	0.1115071283095723	-	UAAUGUGAAUUUUUGGAUCAUUGGUUGUG	146	3	1921	2	10	5	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11859861-11860838	Cluster_250	Pocillopora_meandrina_HIv1___Sc0000000	11859861	11860838	978	2918	380	0.004455106237148732	-	UCUUUCUCUUCUCGUAGAGACGUGACGU	916	38	2817	19	14	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11860889-11861894	Cluster_251	Pocillopora_meandrina_HIv1___Sc0000000	11860889	11861894	1006	4409	565	0.01905193921524155	-	UAAGACAAGCUAUCAUUCCUGCAUUA	947	25	4183	9	69	37	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11862228-11862803	Cluster_252	Pocillopora_meandrina_HIv1___Sc0000000	11862228	11862803	576	994	178	0.08551307847082495	-	UGCAUGUCAUACUUUCUAACAAAGA	165	10	873	15	17	34	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11864344-11866061	Cluster_253	Pocillopora_meandrina_HIv1___Sc0000000	11864344	11866061	1718	7291	1549	0.036071869428061995	-	UCAAUAUAUCUUCUUCAAGUAUUCUGGA	585	122	6467	115	230	140	217	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11866698-11867901	Cluster_254	Pocillopora_meandrina_HIv1___Sc0000000	11866698	11867901	1204	68002	1529	0.02585218081821123	-	UCCCGAUCGUUGUUAAAGUCUUAGAAACCUU	13150	216	66407	202	571	263	343	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11869197-11869625	Cluster_255	Pocillopora_meandrina_HIv1___Sc0000000	11869197	11869625	429	461	167	0.008676789587852495	-	UACAAAGCUCUCACGAAUUCACAAACAGA	56	2	451	2	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11870083-11871218	Cluster_256	Pocillopora_meandrina_HIv1___Sc0000000	11870083	11871218	1136	1923	694	0.011440457618304731	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	88	51	1805	21	12	13	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11871339-11872211	Cluster_257	Pocillopora_meandrina_HIv1___Sc0000000	11871339	11872211	873	909	379	0.009900990099009901	-	UGCUGAAACGAUUUUGACAGGUUGUCA	60	5	866	2	9	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11872624-11873077	Cluster_258	Pocillopora_meandrina_HIv1___Sc0000000	11872624	11873077	454	964	318	0.01037344398340249	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	105	4	949	2	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11879278-11880568	Cluster_259	Pocillopora_meandrina_HIv1___Sc0000000	11879278	11880568	1291	39657	2853	0.020828605290364878	-	UUUGUAGGCUCUAACAGU	14381	19722	18655	196	271	376	437	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11880663-11881090	Cluster_260	Pocillopora_meandrina_HIv1___Sc0000000	11880663	11881090	428	1238	177	0.024232633279483037	-	UAGUAUCUGAAGUCUUUGUAACACA	429	3	1206	1	8	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11882086-11882516	Cluster_261	Pocillopora_meandrina_HIv1___Sc0000000	11882086	11882516	431	365	171	0.0027397260273972603	-	UAUUCCAAUCGUCAGGAAUUUUCCUUCUGUC	30	0	357	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11882808-11883388	Cluster_262	Pocillopora_meandrina_HIv1___Sc0000000	11882808	11883388	581	547	253	0.021937842778793418	-	UACGAGCACUAUAGGUGGAAGAACGCCAU	20	3	516	9	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11884721-11885487	Cluster_263	Pocillopora_meandrina_HIv1___Sc0000000	11884721	11885487	767	686	220	0.06268221574344024	-	UAAUCCCAGGUCUUGUAUCGUAAUACUUCA	129	0	680	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11887649-11888834	Cluster_264	Pocillopora_meandrina_HIv1___Sc0000000	11887649	11888834	1186	2739	783	0.0700985761226725	-	UGUGUAACUUUGAACCUUUCCUUUUGCU	123	11	2594	13	26	38	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11894480-11895204	Cluster_265	Pocillopora_meandrina_HIv1___Sc0000000	11894480	11895204	725	1802	352	0.10654827968923418	-	UGAUAUGAAAGAUUACUUCGACUGAA	156	152	1551	11	29	31	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11895337-11896747	Cluster_266	Pocillopora_meandrina_HIv1___Sc0000000	11895337	11896747	1411	2597	979	0.18713900654601462	-	UGCAUCGAUUUCCGCUUUGAACUUGUUC	93	32	2277	31	60	65	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11896761-11897212	Cluster_267	Pocillopora_meandrina_HIv1___Sc0000000	11896761	11897212	452	421	187	0.07600950118764846	-	UAGGUUUGUCUUCGAGUCCUAGGACGU	37	5	395	2	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11897487-11898269	Cluster_268	Pocillopora_meandrina_HIv1___Sc0000000	11897487	11898269	783	696	226	0.03879310344827586	-	UCUAUGCUAUUAUUCUGUUUCCGACACACU	98	11	667	5	5	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11902264-11902850	Cluster_269	Pocillopora_meandrina_HIv1___Sc0000000	11902264	11902850	587	1411	343	0.008504606661941885	-	UGGUGUAAUUGUUUCUUCUGGAAACUC	105	95	1010	65	118	66	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12107674-12108090	Cluster_270	Pocillopora_meandrina_HIv1___Sc0000000	12107674	12108090	417	225	107	0.3511111111111111	.	UGGGCAAACUCCUUGGGCAUGUUUUU	13	5	181	4	2	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12448980-12450060	Cluster_271	Pocillopora_meandrina_HIv1___Sc0000000	12448980	12450060	1081	1775	256	0.49408450704225354	.	UGGUUUCAAGACUUCAAGAA	556	653	675	10	22	91	324	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12682298-12682725	Cluster_272	Pocillopora_meandrina_HIv1___Sc0000000	12682298	12682725	428	172	74	0.9883720930232558	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	3	162	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12684025-12684445	Cluster_273	Pocillopora_meandrina_HIv1___Sc0000000	12684025	12684445	421	78	22	0.9487179487179487	+	UGAACUUGAACUAUUUGCUGGAGACGAAAG	27	0	73	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12687759-12688641	Cluster_274	Pocillopora_meandrina_HIv1___Sc0000000	12687759	12688641	883	542	203	0.966789667896679	+	UGGAUUAUCAACUUUCAAUCGCGAGUUAGC	82	22	486	11	3	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12688689-12689097	Cluster_275	Pocillopora_meandrina_HIv1___Sc0000000	12688689	12689097	409	119	63	1.0	+	CGAAUCUGGAUUGGCUGAGGCUUUGCA	14	7	102	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12691009-12691534	Cluster_276	Pocillopora_meandrina_HIv1___Sc0000000	12691009	12691534	526	455	166	0.9978021978021978	+	AACAGUGAAGUGCGAAUCUCUAAUGAUCUU	95	12	414	5	9	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12762833-12763259	Cluster_277	Pocillopora_meandrina_HIv1___Sc0000000	12762833	12763259	427	317	35	0.006309148264984227	-	UGAAACUCUGAUCUGAAAAUAUUUGUC	227	1	315	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12777775-12778197	Cluster_278	Pocillopora_meandrina_HIv1___Sc0000000	12777775	12778197	423	176	58	0.17045454545454544	-	AAUCUCUUUAAGCAUGGACCUGG	49	2	44	4	0	76	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12951425-12951935	Cluster_279	Pocillopora_meandrina_HIv1___Sc0000000	12951425	12951935	511	714	225	0.12885154061624648	-	UCCGUCUGAUAGAUAUCCAUGAAAUGUC	158	35	645	3	2	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13015507-13015928	Cluster_280	Pocillopora_meandrina_HIv1___Sc0000000	13015507	13015928	422	88	12	1.0	+	UCUGACGAAGGGCUGACGCUCA	68	4	1	2	76	3	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13269363-13269788	Cluster_281	Pocillopora_meandrina_HIv1___Sc0000000	13269363	13269788	426	152	34	0.993421052631579	+	UACCGUAGAACUUUCCAGAACAUU	41	5	86	0	0	4	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13278878-13279297	Cluster_282	Pocillopora_meandrina_HIv1___Sc0000000	13278878	13279297	420	255	150	0.9803921568627451	+	UUAUUCAUUUUACUUCUCCUUC	17	68	69	39	41	26	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13335663-13336113	Cluster_283	Pocillopora_meandrina_HIv1___Sc0000000	13335663	13336113	451	609	155	0.9983579638752053	+	CUUGUAAUUGGAAUGAGUA	124	362	55	101	45	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13337548-13338139	Cluster_284	Pocillopora_meandrina_HIv1___Sc0000000	13337548	13338139	592	476	259	0.9936974789915967	+	GAAGUCUGUACUGAAAGGUGU	21	105	210	60	45	33	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13607264-13607690	Cluster_285	Pocillopora_meandrina_HIv1___Sc0000000	13607264	13607690	427	132	24	0.9924242424242424	+	UCGUUUAGAUCAGAGAUCACCUCAACU	65	0	130	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13714447-13714873	Cluster_286	Pocillopora_meandrina_HIv1___Sc0000000	13714447	13714873	427	342	33	0.9766081871345029	+	UCGUUUAGAUCAGAGAUCACCUCAACU	169	0	342	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13752128-13752978	Cluster_287	Pocillopora_meandrina_HIv1___Sc0000000	13752128	13752978	851	1557	493	0.10468850353243417	-	UGAUUUAUAGGAGUAAUGAGACAUUAU	149	36	1427	19	25	12	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13753533-13755105	Cluster_288	Pocillopora_meandrina_HIv1___Sc0000000	13753533	13755105	1573	2233	946	0.08060904612628751	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	87	17	2039	4	13	96	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13777450-13777874	Cluster_289	Pocillopora_meandrina_HIv1___Sc0000000	13777450	13777874	425	229	47	0.9912663755458515	+	CGCGGAAAGAGGGGAAAUUGCACU	38	41	104	10	8	2	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13793624-13794060	Cluster_290	Pocillopora_meandrina_HIv1___Sc0000000	13793624	13794060	437	517	143	0.9845261121856866	+	UGCGAAAGAAACAGGGAAAGUUUGACGAUG	69	2	449	2	7	29	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13795205-13795634	Cluster_291	Pocillopora_meandrina_HIv1___Sc0000000	13795205	13795634	430	2348	21	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	1398	2	2341	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13888862-13889287	Cluster_292	Pocillopora_meandrina_HIv1___Sc0000000	13888862	13889287	426	100	39	0.99	+	UGUGUAGAUAUGUCUUUUGGACAGGA	24	0	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13932415-13932832	Cluster_293	Pocillopora_meandrina_HIv1___Sc0000000	13932415	13932832	418	125	60	1.0	+	UGACGAUUUUCGCGGCUCGAUUUUGU	15	0	124	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14041335-14042284	Cluster_294	Pocillopora_meandrina_HIv1___Sc0000000	14041335	14042284	950	2282	757	0.10254163014899212	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	185	13	2132	8	11	36	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14042286-14043154	Cluster_295	Pocillopora_meandrina_HIv1___Sc0000000	14042286	14043154	869	567	258	0.06349206349206349	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	32	4	538	3	2	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14043355-14045670	Cluster_296	Pocillopora_meandrina_HIv1___Sc0000000	14043355	14045670	2316	4525	1390	0.1425414364640884	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	199	51	3945	30	36	181	282	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14069216-14069620	Cluster_297	Pocillopora_meandrina_HIv1___Sc0000000	14069216	14069620	405	95	55	1.0	+	UGACGAUUUUCGCGGCUCGAUUUUGU	8	1	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14199236-14199664	Cluster_298	Pocillopora_meandrina_HIv1___Sc0000000	14199236	14199664	429	311	26	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	216	1	310	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14564110-14564538	Cluster_299	Pocillopora_meandrina_HIv1___Sc0000000	14564110	14564538	429	274	25	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	181	2	271	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14751023-14751456	Cluster_300	Pocillopora_meandrina_HIv1___Sc0000000	14751023	14751456	434	358	163	0.9301675977653632	+	UCAGAUGGUUGAUAACUGCAGAUGACGU	29	4	327	3	2	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14751995-14752696	Cluster_301	Pocillopora_meandrina_HIv1___Sc0000000	14751995	14752696	702	264	141	0.9356060606060606	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	24	2	256	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14753926-14754354	Cluster_302	Pocillopora_meandrina_HIv1___Sc0000000	14753926	14754354	429	262	144	0.8740458015267175	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	30	2	239	0	2	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14917731-14918157	Cluster_303	Pocillopora_meandrina_HIv1___Sc0000000	14917731	14918157	427	186	68	0.0	-	UGAUUGACGUACGGUAUUUGAGACGC	20	1	181	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15297104-15297532	Cluster_304	Pocillopora_meandrina_HIv1___Sc0000000	15297104	15297532	429	158	32	0.18354430379746836	-	UCUCUCUCGGUAUAGCUUUCAAAACAGUC	66	4	124	0	2	28	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15361997-15362422	Cluster_305	Pocillopora_meandrina_HIv1___Sc0000000	15361997	15362422	426	307	76	0.0	-	CCUCUAUGAUGAUUACCUUAACAC	35	101	94	18	19	32	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15365853-15366280	Cluster_306	Pocillopora_meandrina_HIv1___Sc0000000	15365853	15366280	428	158	84	0.0	-	CAUUUCUCUCUGAAGGGC	10	55	84	9	4	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15682027-15682444	Cluster_307	Pocillopora_meandrina_HIv1___Sc0000000	15682027	15682444	418	197	3	1.0	+	AAAUCCCACCUGGAUUUU	162	197	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15838642-15839444	Cluster_308	Pocillopora_meandrina_HIv1___Sc0000000	15838642	15839444	803	1256	235	0.24363057324840764	.	UGAUUGAGUCAAAGACAAUGUGGGAGUC	345	10	1161	5	7	51	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15877485-15877913	Cluster_309	Pocillopora_meandrina_HIv1___Sc0000000	15877485	15877913	429	245	11	0.9959183673469387	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	212	0	245	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16151379-16151857	Cluster_310	Pocillopora_meandrina_HIv1___Sc0000000	16151379	16151857	479	368	203	0.0	-	AAGAACCAUCUGCAUCAGACAU	12	52	136	44	50	51	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16197870-16198683	Cluster_311	Pocillopora_meandrina_HIv1___Sc0000000	16197870	16198683	814	17179	393	0.999708946970138	+	UAUGAUAUCAUAGCCUUUGAGA	8511	1452	826	1648	11037	1190	1026	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16218376-16218794	Cluster_312	Pocillopora_meandrina_HIv1___Sc0000000	16218376	16218794	419	1437	28	0.0	-	GACUUGAAGCGGUUGGAA	1235	1434	1	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16370090-16370544	Cluster_313	Pocillopora_meandrina_HIv1___Sc0000000	16370090	16370544	455	1886	134	0.9931071049840933	+	AGCUCAUUCAGGACAGUCCAGCGAACUAUC	765	36	1765	11	47	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16388395-16388993	Cluster_314	Pocillopora_meandrina_HIv1___Sc0000000	16388395	16388993	599	1827	181	0.9967159277504105	+	AGCUCAUUCAGGACAGUCCAGCGAACUAUC	703	35	1712	17	42	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16449057-16449477	Cluster_315	Pocillopora_meandrina_HIv1___Sc0000000	16449057	16449477	421	125	75	0.0	-	AAAGACUGGCAGCAUUGUGGACGUUGUU	9	19	83	12	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16450615-16451050	Cluster_316	Pocillopora_meandrina_HIv1___Sc0000000	16450615	16451050	436	322	233	0.006211180124223602	-	GAAAAGAUCUGCAGAUGAAGAGAAAGAUGA	7	33	240	15	11	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16480304-16481760	Cluster_317	Pocillopora_meandrina_HIv1___Sc0000000	16480304	16481760	1457	2717	1061	0.3146853146853147	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	88	45	2253	62	19	128	210	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16481861-16483301	Cluster_318	Pocillopora_meandrina_HIv1___Sc0000000	16481861	16483301	1441	7471	995	0.05969749698835497	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	1487	34	7101	34	22	163	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16918087-16918514	Cluster_319	Pocillopora_meandrina_HIv1___Sc0000000	16918087	16918514	428	204	59	0.0	-	GCUAUAGACUGCUCUUUGAUCCAAACACAU	37	12	118	8	14	12	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17062895-17064293	Cluster_320	Pocillopora_meandrina_HIv1___Sc0000000	17062895	17064293	1399	1544	584	0.908678756476684	+	UGAGAAUGUUUAGCCCGAGAUACGCUGA	66	34	1339	64	19	44	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17091980-17092398	Cluster_321	Pocillopora_meandrina_HIv1___Sc0000000	17091980	17092398	419	200	92	0.015	-	GGUAGCGUGGCCGAGUGG	10	109	11	30	26	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17582770-17583201	Cluster_322	Pocillopora_meandrina_HIv1___Sc0000000	17582770	17583201	432	480	48	0.0	-	UGAUCUCUGUUAUACCCUCUUGGGUAGUGU	179	1	476	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17858000-17858429	Cluster_323	Pocillopora_meandrina_HIv1___Sc0000000	17858000	17858429	430	188	67	1.0	+	UAUCCGGUUGUAACGCUAGACAGUCACGCU	37	1	185	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17927790-17928217	Cluster_324	Pocillopora_meandrina_HIv1___Sc0000000	17927790	17928217	428	116	6	0.0	-	GUGAAUGAUGACAAGAAACAAACUGAUC	96	0	113	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18139302-18139735	Cluster_325	Pocillopora_meandrina_HIv1___Sc0000000	18139302	18139735	434	292	100	0.976027397260274	+	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	22	10	261	1	0	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18537549-18537976	Cluster_326	Pocillopora_meandrina_HIv1___Sc0000000	18537549	18537976	428	82	18	1.0	+	UUUCAGCAGAGGACAAUGAUUCAAAAGAUG	44	1	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18555063-18555627	Cluster_327	Pocillopora_meandrina_HIv1___Sc0000000	18555063	18555627	565	705	172	0.7631205673758865	.	UCGAAACGCAUCCAUUUUGGCCAUACA	92	15	596	10	6	41	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18562805-18563455	Cluster_328	Pocillopora_meandrina_HIv1___Sc0000000	18562805	18563455	651	644	305	0.19254658385093168	-	UGUGUCAGAUGCGUUUCAGAAAUGGUU	99	7	576	12	2	17	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18563591-18564155	Cluster_329	Pocillopora_meandrina_HIv1___Sc0000000	18563591	18564155	565	862	303	0.12877030162412992	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	89	1	785	1	5	32	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18564393-18564819	Cluster_330	Pocillopora_meandrina_HIv1___Sc0000000	18564393	18564819	427	247	137	0.13360323886639677	-	UGAGUCGAGGUUAUUCACAAUACGAGC	39	7	210	0	5	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18585347-18586585	Cluster_331	Pocillopora_meandrina_HIv1___Sc0000000	18585347	18586585	1239	1270	467	0.2677165354330709	.	UUGGAUAAUUUUGACGAAACCAGAGACA	155	17	1166	5	11	30	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18586632-18588144	Cluster_332	Pocillopora_meandrina_HIv1___Sc0000000	18586632	18588144	1513	1330	431	0.5984962406015037	.	AGCAUACUCGAAGAACUGCAAGUUAAUGGA	123	43	1233	4	15	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18589062-18589489	Cluster_333	Pocillopora_meandrina_HIv1___Sc0000000	18589062	18589489	428	348	72	0.03735632183908046	-	UGUGUUCGUUGAAUGGCUCCCCAUGCG	93	4	335	1	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19104877-19106198	Cluster_334	Pocillopora_meandrina_HIv1___Sc0000000	19104877	19106198	1322	1509	503	0.9171636845593109	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	116	8	1429	3	4	31	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19106418-19107075	Cluster_335	Pocillopora_meandrina_HIv1___Sc0000000	19106418	19107075	658	660	308	0.5924242424242424	.	UUAUAUCUCUUAUUCAUCUCUUUCCGG	29	6	592	3	2	17	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19107220-19107874	Cluster_336	Pocillopora_meandrina_HIv1___Sc0000000	19107220	19107874	655	611	268	0.7986906710310966	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	109	4	547	10	3	11	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19172834-19173259	Cluster_337	Pocillopora_meandrina_HIv1___Sc0000000	19172834	19173259	426	161	110	0.08074534161490683	-	CUUGAGUCAAACAAGCGUGCACUGAAUA	12	20	127	6	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19548879-19549664	Cluster_338	Pocillopora_meandrina_HIv1___Sc0000000	19548879	19549664	786	3486	428	0.2455536431440046	.	UUCGAAGAAACUCUUGCCAUCGCCUGGA	824	26	3237	9	20	49	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19550612-19551039	Cluster_339	Pocillopora_meandrina_HIv1___Sc0000000	19550612	19551039	428	100	5	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	63	0	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19551966-19552393	Cluster_340	Pocillopora_meandrina_HIv1___Sc0000000	19551966	19552393	428	144	76	0.22916666666666666	.	UGUUGCAAAGCUCUUCGUCCAAAAGA	12	10	116	5	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19670489-19670916	Cluster_341	Pocillopora_meandrina_HIv1___Sc0000000	19670489	19670916	428	134	51	0.19402985074626866	-	UGUUUGAUCCAAUUCAGGAUACUUUGGC	29	4	117	1	3	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19726198-19726622	Cluster_342	Pocillopora_meandrina_HIv1___Sc0000000	19726198	19726622	425	188	92	0.75	.	CUUUCUGAUGUAAUACGCUC	15	125	3	43	13	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19758301-19758726	Cluster_343	Pocillopora_meandrina_HIv1___Sc0000000	19758301	19758726	426	153	64	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	16	1	146	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19791285-19791992	Cluster_344	Pocillopora_meandrina_HIv1___Sc0000000	19791285	19791992	708	622	97	0.5192926045016077	.	UCCGGCUCGAAGGACCAU	152	314	248	29	3	28	0	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000000:19799557-19800086	Cluster_345	Pocillopora_meandrina_HIv1___Sc0000000	19799557	19800086	530	3001	759	0.0	-	AGGAAGAAUGAGACACUCUGAUUGCU	69	467	1812	189	249	145	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19800614-19801084	Cluster_346	Pocillopora_meandrina_HIv1___Sc0000000	19800614	19801084	471	2492	354	0.0	-	GUCAAUGAUGAUUGUGUGAUUCCCCUUCA	479	79	1857	81	58	79	338	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19802252-19802723	Cluster_347	Pocillopora_meandrina_HIv1___Sc0000000	19802252	19802723	472	1508	188	0.009283819628647215	-	UGGAAAUGAUGUUACUCCGUGU	357	190	565	147	383	137	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19809696-19810174	Cluster_348	Pocillopora_meandrina_HIv1___Sc0000000	19809696	19810174	479	580	194	0.0	-	CACCUUUGAUGAUAUUUAUCC	41	165	208	74	45	27	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19813053-19813480	Cluster_349	Pocillopora_meandrina_HIv1___Sc0000000	19813053	19813480	428	355	235	0.0	-	GAUCCGUGGAGCUAAGGACAAGAAGCU	8	88	159	22	28	24	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19813596-19814046	Cluster_350	Pocillopora_meandrina_HIv1___Sc0000000	19813596	19814046	451	234	149	0.0	-	CAGAUCCACAGGAUCCGUAUCACUCU	12	88	81	14	17	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19856455-19856872	Cluster_351	Pocillopora_meandrina_HIv1___Sc0000000	19856455	19856872	418	149	35	0.9865771812080537	+	ACCGAGGAGGAAAGACUG	68	131	10	1	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19934098-19934520	Cluster_352	Pocillopora_meandrina_HIv1___Sc0000000	19934098	19934520	423	6716	163	0.9962775461584277	+	GUAGUCGUGGCCGAGUGG	3596	6577	19	53	18	21	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19970946-19971368	Cluster_353	Pocillopora_meandrina_HIv1___Sc0000000	19970946	19971368	423	177	82	0.0	-	AAUUAUGAUGAGAACUAUACUUCAAGGU	17	17	99	27	12	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19971632-19972106	Cluster_354	Pocillopora_meandrina_HIv1___Sc0000000	19971632	19972106	475	15879	911	0.0	-	CUGUGAUAAAACUUGAAGUUCUGAGC	2051	4083	7452	1067	1071	629	1577	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19974441-19974974	Cluster_355	Pocillopora_meandrina_HIv1___Sc0000000	19974441	19974974	534	633	312	0.0	-	UUCAGUGGUUCCUGUCGAGAGGUACAUA	20	169	309	56	21	33	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19977738-19978273	Cluster_356	Pocillopora_meandrina_HIv1___Sc0000000	19977738	19978273	536	985	297	0.0040609137055837565	-	AUGGCCAUUUGCUUGUUCCCUGA	92	187	370	75	99	203	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20051814-20052242	Cluster_357	Pocillopora_meandrina_HIv1___Sc0000000	20051814	20052242	429	279	37	0.0	-	GAGUAAAUCACGAGAGAAAGACAAGGACA	121	1	272	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20238800-20239217	Cluster_358	Pocillopora_meandrina_HIv1___Sc0000000	20238800	20239217	418	347	70	0.005763688760806916	-	AUCCGGCUCGAAGGACCA	175	241	103	1	0	2	0	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000000:20372416-20372510	Cluster_359	Pocillopora_meandrina_HIv1___Sc0000000	20372416	20372510	95	522228	378	0.0	-	UCAAGUCUAGGCUGGUUAGUUU	361684	1294	19	20216	498308	2255	136	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:20455492-20455956	Cluster_360	Pocillopora_meandrina_HIv1___Sc0000000	20455492	20455956	465	319	156	0.009404388714733543	-	UGGUCUAAGGCGCUGGUUUU	17	177	43	19	34	30	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20487173-20487823	Cluster_361	Pocillopora_meandrina_HIv1___Sc0000000	20487173	20487823	651	2190	850	0.9424657534246575	+	CAAUUCAGACUACUCUUUGUCCAACCCAA	86	575	671	306	320	114	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20534016-20535106	Cluster_362	Pocillopora_meandrina_HIv1___Sc0000000	20534016	20535106	1091	3907	1688	0.43997952393140516	.	UCUGGCGUAUAACUGUUCACC	95	2027	75	1123	540	112	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20554496-20554926	Cluster_363	Pocillopora_meandrina_HIv1___Sc0000000	20554496	20554926	431	391	90	0.010230179028132993	-	GCCCGACUAGCUCAGUCGGUAGAGCAUGA	163	26	350	8	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20557163-20557593	Cluster_364	Pocillopora_meandrina_HIv1___Sc0000000	20557163	20557593	431	5648	294	1.0	+	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	2591	131	5494	6	6	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20559748-20560165	Cluster_365	Pocillopora_meandrina_HIv1___Sc0000000	20559748	20560165	418	345	22	1.0	+	CUCAGUCGGUAGAGCAUA	278	345	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20665499-20665929	Cluster_366	Pocillopora_meandrina_HIv1___Sc0000000	20665499	20665929	431	437	76	0.0	-	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	205	10	423	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20681229-20681643	Cluster_367	Pocillopora_meandrina_HIv1___Sc0000000	20681229	20681643	415	146	72	0.9931506849315068	+	GCUGCCGGUCGUUGGGGG	28	88	40	9	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20703269-20703749	Cluster_368	Pocillopora_meandrina_HIv1___Sc0000000	20703269	20703749	481	2806	479	0.002851033499643621	-	GCGCGGAUGAGCCUCACUGGUGUGGGGU	255	1010	1324	164	125	114	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21034486-21034968	Cluster_369	Pocillopora_meandrina_HIv1___Sc0000000	21034486	21034968	483	1440	172	0.9798611111111111	+	UCAUCUUCGGAGCUGACUGUAACAAGCC	292	7	1396	4	5	11	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21157049-21157467	Cluster_370	Pocillopora_meandrina_HIv1___Sc0000000	21157049	21157467	419	75	10	0.04	-	AAACGUCAGCUUUUUUACCCA	54	14	1	58	0	0	2	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21409875-21410303	Cluster_371	Pocillopora_meandrina_HIv1___Sc0000000	21409875	21410303	429	462	39	0.0	-	UGUGCAGGAACUUAAAAAUACAAUCUAUA	291	5	455	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21554833-21555299	Cluster_372	Pocillopora_meandrina_HIv1___Sc0000000	21554833	21555299	467	319	215	0.6802507836990596	.	CUGCCUGUUUUUUCGUUUGG	10	194	27	65	28	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:69798-71462	Cluster_373	Pocillopora_meandrina_HIv1___Sc0000001	69798	71462	1665	15151	1175	0.19424460431654678	-	UUGUCUGGAUUGUACACUUUGAAGUGCA	1390	68	14624	37	53	99	270	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:244651-245089	Cluster_374	Pocillopora_meandrina_HIv1___Sc0000001	244651	245089	439	605	144	0.0	-	CAGCACAUUUACUGAAGCCGUCUGA	62	25	501	12	12	16	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:411937-413609	Cluster_375	Pocillopora_meandrina_HIv1___Sc0000001	411937	413609	1673	1742	787	0.04535017221584386	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	66	15	1638	15	16	28	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:413850-414261	Cluster_376	Pocillopora_meandrina_HIv1___Sc0000001	413850	414261	412	111	55	0.02702702702702703	-	UGAUACUUUUAAGAAUUUUGAUAGACAUG	15	2	108	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:425523-426000	Cluster_377	Pocillopora_meandrina_HIv1___Sc0000001	425523	426000	478	511	183	0.8277886497064579	+	UCAACGAUCACAAUCUUCCUUACUGCUU	53	3	488	1	0	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:556066-556476	Cluster_378	Pocillopora_meandrina_HIv1___Sc0000001	556066	556476	411	209	159	0.0	-	AAGAUGGACAAUGGCUUCGAGACA	4	54	81	16	22	19	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:818096-818531	Cluster_379	Pocillopora_meandrina_HIv1___Sc0000001	818096	818531	436	389	164	0.9974293059125964	+	UGUAACUGAAAAGAUCUUGAAGGAACUGAA	16	4	373	4	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:868705-869126	Cluster_380	Pocillopora_meandrina_HIv1___Sc0000001	868705	869126	422	296	201	0.006756756756756757	-	CCGAACUGAGAUCAUUAUUUUGGCCA	6	65	134	21	27	10	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:891761-892186	Cluster_381	Pocillopora_meandrina_HIv1___Sc0000001	891761	892186	426	167	71	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	17	2	156	1	4	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:911171-911649	Cluster_382	Pocillopora_meandrina_HIv1___Sc0000001	911171	911649	479	484	91	0.8305785123966942	+	CGAACCAACAAGAACAAUAUGUGCUGACUAC	132	2	475	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:912150-912578	Cluster_383	Pocillopora_meandrina_HIv1___Sc0000001	912150	912578	429	276	82	0.9855072463768116	+	UUGCAAAUGAAUCAGCAGAAUGUAGAGAG	61	3	255	0	2	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:914054-914481	Cluster_384	Pocillopora_meandrina_HIv1___Sc0000001	914054	914481	428	157	48	0.006369426751592357	-	AAUGGAAAGAAAACACUGAAAAAUGAUG	28	7	124	0	1	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:917381-917858	Cluster_385	Pocillopora_meandrina_HIv1___Sc0000001	917381	917858	478	325	97	0.47384615384615386	.	UCGAUCACCAGCGCACUCCAAACCAAUAAGG	52	4	263	8	0	28	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:968429-969485	Cluster_386	Pocillopora_meandrina_HIv1___Sc0000001	968429	969485	1057	1934	500	0.2202688728024819	.	UGUACUCUUUCUAUUUUCCUUCGUUCCUGGG	143	38	1834	9	7	9	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:974682-975142	Cluster_387	Pocillopora_meandrina_HIv1___Sc0000001	974682	975142	461	2117	173	0.9163911195087387	+	UUUCACCAAUCCGAAGUGUCCCAAAAGU	491	20	1968	4	14	30	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1051944-1052372	Cluster_388	Pocillopora_meandrina_HIv1___Sc0000001	1051944	1052372	429	132	27	0.9924242424242424	+	CCGCCUGAAAAAAAAAAAAAAAAAAAAAAA	29	4	124	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1354659-1355144	Cluster_389	Pocillopora_meandrina_HIv1___Sc0000001	1354659	1355144	486	6462	465	0.001392757660167131	-	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	1973	161	6146	16	29	64	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1459253-1459676	Cluster_390	Pocillopora_meandrina_HIv1___Sc0000001	1459253	1459676	424	3336	128	1.0	+	AAAGAAGUGCAAGUGGUAGAGA	1704	626	5	342	2295	57	11	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1587809-1588306	Cluster_391	Pocillopora_meandrina_HIv1___Sc0000001	1587809	1588306	498	336	162	0.9166666666666666	+	UCUGAUCGACGAGUUUCAAUCCUUUGU	26	2	324	2	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1588893-1589306	Cluster_392	Pocillopora_meandrina_HIv1___Sc0000001	1588893	1589306	414	151	84	0.9337748344370861	+	UAUGUGAUCGGUGAAUUUGCUUCAACA	13	0	138	1	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1589392-1589818	Cluster_393	Pocillopora_meandrina_HIv1___Sc0000001	1589392	1589818	427	153	80	0.8104575163398693	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	14	2	127	2	5	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1590307-1590710	Cluster_394	Pocillopora_meandrina_HIv1___Sc0000001	1590307	1590710	404	150	91	0.8066666666666666	+	UACUGGAAUAAUAACUUUACGAUCAACA	9	1	141	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1591154-1591564	Cluster_395	Pocillopora_meandrina_HIv1___Sc0000001	1591154	1591564	411	148	97	0.8445945945945946	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUA	8	2	137	2	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1606008-1606599	Cluster_396	Pocillopora_meandrina_HIv1___Sc0000001	1606008	1606599	592	437	103	0.977116704805492	+	UACUCCAUUUUUCUGCAGCCUUUUUAUC	59	3	424	6	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1639234-1639676	Cluster_397	Pocillopora_meandrina_HIv1___Sc0000001	1639234	1639676	443	201	150	1.0	+	AUAAAGAAUCUGAUGAAUCAAGUA	5	19	121	13	11	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1689513-1689966	Cluster_398	Pocillopora_meandrina_HIv1___Sc0000001	1689513	1689966	454	318	207	0.9968553459119497	+	CUGCCACGAGAAGAACGAACU	7	62	145	30	16	22	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1690274-1690785	Cluster_399	Pocillopora_meandrina_HIv1___Sc0000001	1690274	1690785	512	407	236	0.9975429975429976	+	CGACACCGAGAAACAAACCGAGACU	10	89	196	20	35	43	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1691388-1691808	Cluster_400	Pocillopora_meandrina_HIv1___Sc0000001	1691388	1691808	421	212	142	0.9952830188679245	+	CUUGGUCAUGCGCCGAAUGCCUGAACG	14	46	108	15	9	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1692256-1693064	Cluster_401	Pocillopora_meandrina_HIv1___Sc0000001	1692256	1693064	809	949	585	0.9989462592202318	+	UACAGACAUCUAUGGUAACUCAAAAA	19	194	444	65	66	101	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1723121-1723549	Cluster_402	Pocillopora_meandrina_HIv1___Sc0000001	1723121	1723549	429	388	42	0.002577319587628866	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	288	0	386	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1981097-1981526	Cluster_403	Pocillopora_meandrina_HIv1___Sc0000001	1981097	1981526	430	116	49	1.0	+	UAUGAUUACGAGGAAUUCUCCAAAGACUUUG	29	2	105	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2046484-2048659	Cluster_404	Pocillopora_meandrina_HIv1___Sc0000001	2046484	2048659	2176	1689	726	0.9662522202486679	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	111	32	1606	4	6	20	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2049667-2051839	Cluster_405	Pocillopora_meandrina_HIv1___Sc0000001	2049667	2051839	2173	2894	1046	0.9291637871458189	+	UAAUAUCUAUUGAUCUUACAGGCUCCGC	89	30	2706	31	19	34	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2051958-2052450	Cluster_406	Pocillopora_meandrina_HIv1___Sc0000001	2051958	2052450	493	478	291	0.8117154811715481	+	UGUUCCGGUACAAAUUUUCCCUGCAUA	13	4	422	3	6	11	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2111243-2111657	Cluster_407	Pocillopora_meandrina_HIv1___Sc0000001	2111243	2111657	415	68	3	1.0	+	UCUGACGAAGGGCUGACACUCG	66	1	0	1	66	0	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2233397-2233817	Cluster_408	Pocillopora_meandrina_HIv1___Sc0000001	2233397	2233817	421	95	37	0.9789473684210527	+	GAACCGAAAACUUUCAACAAAAUUCCCUUU	19	9	69	5	9	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2235738-2236165	Cluster_409	Pocillopora_meandrina_HIv1___Sc0000001	2235738	2236165	428	153	74	1.0	+	ACGAAAAUAGCAGAAUGAACGAAGAAGC	17	3	143	5	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2237617-2238340	Cluster_410	Pocillopora_meandrina_HIv1___Sc0000001	2237617	2238340	724	3164	473	0.13527180783817952	-	UGAAACUACUUGAACUGGUUCGCUUCAAU	1046	157	2656	127	52	47	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2243710-2244293	Cluster_411	Pocillopora_meandrina_HIv1___Sc0000001	2243710	2244293	584	2386	338	0.05993294216261526	-	UUAAAUGAAGUUUCCAAUGUUUGACUGUC	994	19	2272	12	17	46	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2254606-2255281	Cluster_412	Pocillopora_meandrina_HIv1___Sc0000001	2254606	2255281	676	223	116	0.9865470852017937	+	UGCAAGAGUUUUUCGCCGCGAGACACCUG	30	8	203	3	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2275231-2275660	Cluster_413	Pocillopora_meandrina_HIv1___Sc0000001	2275231	2275660	430	461	111	1.0	+	ACGAAAAUAACAGAAUGAACUUAGAAGCAC	145	3	446	1	7	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2276928-2277360	Cluster_414	Pocillopora_meandrina_HIv1___Sc0000001	2276928	2277360	433	387	120	0.9276485788113695	+	UUAAAGUAAAAAACACAAAGCUUCCUGCAGA	66	19	352	2	8	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2285128-2285666	Cluster_415	Pocillopora_meandrina_HIv1___Sc0000001	2285128	2285666	539	871	285	0.41102181400688864	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	51	5	834	6	1	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2286291-2287142	Cluster_416	Pocillopora_meandrina_HIv1___Sc0000001	2286291	2287142	852	1243	239	0.9058728881737731	+	CGUGUACGACGCCUCUGCCCGAGCUUCAG	389	6	1206	15	3	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2288505-2288931	Cluster_417	Pocillopora_meandrina_HIv1___Sc0000001	2288505	2288931	427	213	93	0.2112676056338028	.	UCACGAAUCUUUGCCAUUGUGAGGCUC	23	6	194	1	3	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2289108-2289522	Cluster_418	Pocillopora_meandrina_HIv1___Sc0000001	2289108	2289522	415	100	63	0.79	.	GGUUAUACUAGACGUAGAGGUUG	11	4	59	4	4	20	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2289525-2289963	Cluster_419	Pocillopora_meandrina_HIv1___Sc0000001	2289525	2289963	439	317	167	0.2334384858044164	.	UCUAACGGAUACAGCUGCUGUACUGCU	23	21	272	2	6	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2290080-2290503	Cluster_420	Pocillopora_meandrina_HIv1___Sc0000001	2290080	2290503	424	112	29	0.9910714285714286	+	UAGUGUUGCUAUACUGGGAUUUCC	33	3	62	0	0	0	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2303037-2303468	Cluster_421	Pocillopora_meandrina_HIv1___Sc0000001	2303037	2303468	432	546	117	0.9963369963369964	+	GAACCAAAAACUUUCAACAAAAUUCCCUUU	208	10	510	3	23	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2305359-2305783	Cluster_422	Pocillopora_meandrina_HIv1___Sc0000001	2305359	2305783	425	111	63	1.0	+	CUGGCCGACUGAAGACGAACGAGAAUUAGC	15	1	106	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2324994-2325422	Cluster_423	Pocillopora_meandrina_HIv1___Sc0000001	2324994	2325422	429	210	53	0.9857142857142858	+	UUAUUUGGAACCGAAAACUUUC	42	31	126	2	44	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2327372-2327799	Cluster_424	Pocillopora_meandrina_HIv1___Sc0000001	2327372	2327799	428	125	54	1.0	+	AACGAAAAUAGCAGAAUGAACGAAGAAGC	17	2	117	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2328890-2329314	Cluster_425	Pocillopora_meandrina_HIv1___Sc0000001	2328890	2329314	425	184	85	0.2826086956521739	.	AAGCGUGAAACUACUUGAACCGGUU	21	20	110	14	12	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2348008-2348432	Cluster_426	Pocillopora_meandrina_HIv1___Sc0000001	2348008	2348432	425	87	32	1.0	+	ACGAAAAUAGCAGAAUGAACGAAGAAGCAC	21	0	84	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2368290-2368717	Cluster_427	Pocillopora_meandrina_HIv1___Sc0000001	2368290	2368717	428	99	28	0.9696969696969697	+	GAGCCGAAAACUUUCAACAAAAUUCCCUAU	19	1	82	9	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2487165-2487774	Cluster_428	Pocillopora_meandrina_HIv1___Sc0000001	2487165	2487774	610	268	163	0.9925373134328358	+	ACGAGAUGUAAACUUUCCAGAA	35	39	97	36	58	25	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2537226-2537644	Cluster_429	Pocillopora_meandrina_HIv1___Sc0000001	2537226	2537644	419	262	196	0.007633587786259542	-	UCAAGAGUUUCUGGAACGUGCU	6	59	93	32	30	23	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2731349-2731771	Cluster_430	Pocillopora_meandrina_HIv1___Sc0000001	2731349	2731771	423	211	68	1.0	+	GAUGUUGUGUCGGGACCUGAAAC	70	32	70	3	12	88	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2746252-2746672	Cluster_431	Pocillopora_meandrina_HIv1___Sc0000001	2746252	2746672	421	331	16	0.9969788519637462	+	UCGACUCCCGGUAUGGGAACA	289	2	3	299	19	7	1	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2774475-2774897	Cluster_432	Pocillopora_meandrina_HIv1___Sc0000001	2774475	2774897	423	370	57	1.0	+	CUGGCUGUGAAAGAUCUCGCAUU	121	13	4	15	133	194	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2801084-2801513	Cluster_433	Pocillopora_meandrina_HIv1___Sc0000001	2801084	2801513	430	186	22	0.0	-	CUAUGUGGCAGUGGGUUUUUGGAUCCUCAU	41	0	186	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2839815-2840245	Cluster_434	Pocillopora_meandrina_HIv1___Sc0000001	2839815	2840245	431	296	121	0.010135135135135136	-	CUGGCCGACUGAAGACGAACGAGAAUUAGC	49	8	281	2	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2842056-2842485	Cluster_435	Pocillopora_meandrina_HIv1___Sc0000001	2842056	2842485	430	159	17	0.0	-	CUAUGUGGCAGUGGGUUUUUGGAUCCUCAU	33	0	158	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2858484-2858998	Cluster_436	Pocillopora_meandrina_HIv1___Sc0000001	2858484	2858998	515	243	111	0.02880658436213992	-	UUUAAGUAAAAACACAAAGCUUCCUGCAGA	24	19	210	7	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2862246-2862675	Cluster_437	Pocillopora_meandrina_HIv1___Sc0000001	2862246	2862675	430	550	90	0.005454545454545455	-	UUAUGUGGCAGUGUGUUUUUGGAUCCUGA	242	10	531	2	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2867938-2868506	Cluster_438	Pocillopora_meandrina_HIv1___Sc0000001	2867938	2868506	569	604	132	0.13079470198675497	-	UUCGAUCCUAAAUUCUCUCCAUG	119	20	296	19	54	193	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2881477-2881912	Cluster_439	Pocillopora_meandrina_HIv1___Sc0000001	2881477	2881912	436	290	72	0.0034482758620689655	-	GGCAGUGGGUUUUUGGAUCCUGAUCAGUGU	82	15	264	1	6	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2903040-2903512	Cluster_440	Pocillopora_meandrina_HIv1___Sc0000001	2903040	2903512	473	289	142	0.006920415224913495	-	UGCUGGCCGACUGAGGACGAACAAGAAUU	21	9	268	2	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2905338-2905767	Cluster_441	Pocillopora_meandrina_HIv1___Sc0000001	2905338	2905767	430	287	53	0.013937282229965157	-	UUAUGUGGCAGUGUGUUUUUGGAUCCUGA	138	7	277	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2983017-2983446	Cluster_442	Pocillopora_meandrina_HIv1___Sc0000001	2983017	2983446	430	126	31	1.0	+	UUGGAACAAAGAUUGAACAUGAUGCUUUUC	54	2	121	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3114844-3115375	Cluster_443	Pocillopora_meandrina_HIv1___Sc0000001	3114844	3115375	532	1723	296	1.0	+	UUGGAAGCUGGCUGUUUUGACU	319	83	660	119	592	148	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3115989-3116533	Cluster_444	Pocillopora_meandrina_HIv1___Sc0000001	3115989	3116533	545	448	147	0.9955357142857143	+	CAGGAAGUGAGAUGCUUUGAAUGGUGAAU	50	40	319	7	18	33	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3380068-3380495	Cluster_445	Pocillopora_meandrina_HIv1___Sc0000001	3380068	3380495	428	129	41	0.06201550387596899	-	UUGGUGUGAUUGUCAUGUCUGGGAAUU	27	2	127	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3428054-3428455	Cluster_446	Pocillopora_meandrina_HIv1___Sc0000001	3428054	3428455	402	113	71	1.0	+	GACGAGGUGGCCGAGUGG	10	52	30	7	6	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3434623-3435032	Cluster_447	Pocillopora_meandrina_HIv1___Sc0000001	3434623	3435032	410	186	81	0.6236559139784946	.	UAAACAACAGAAAGUCCUUUGAAACGUG	19	4	150	2	0	8	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3536699-3537118	Cluster_448	Pocillopora_meandrina_HIv1___Sc0000001	3536699	3537118	420	93	19	0.021505376344086023	-	CAACCAGGGAUUGAGAACAGAGGA	23	37	11	4	12	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3656409-3656832	Cluster_449	Pocillopora_meandrina_HIv1___Sc0000001	3656409	3656832	424	99	46	0.0	-	UACUGGACUGCAUCUGAAUAUUCCU	14	3	67	1	8	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3883545-3883976	Cluster_450	Pocillopora_meandrina_HIv1___Sc0000001	3883545	3883976	432	252	149	1.0	+	UCUGAUGGUCUUAAGGGACGUGUGUUU	14	34	161	10	14	21	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3998764-3999467	Cluster_451	Pocillopora_meandrina_HIv1___Sc0000001	3998764	3999467	704	1091140	5670	1.1914144839342339e-05	-	CGACCAAGAUAGUCGAACUCGACCCUGUCA	311593	72426	902936	8659	60041	31493	15585	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4021711-4022206	Cluster_452	Pocillopora_meandrina_HIv1___Sc0000001	4021711	4022206	496	2492	330	0.9899678972712681	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	356	17	2402	13	19	14	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4023278-4023700	Cluster_453	Pocillopora_meandrina_HIv1___Sc0000001	4023278	4023700	423	95	26	0.0	-	GGGGAAUUAGCUCAAAUGGUAGAGCGCU	26	15	56	10	2	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4053472-4054172	Cluster_454	Pocillopora_meandrina_HIv1___Sc0000001	4053472	4054172	701	69675	3895	0.9995407247936849	+	UGGGGGUAGUCGUUCUAUGU	14026	37445	17217	4949	2165	2670	5229	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4062957-4063383	Cluster_455	Pocillopora_meandrina_HIv1___Sc0000001	4062957	4063383	427	225	131	0.8222222222222222	+	UGAGUCGAGGUUAUUCACAAUACGAGC	31	5	189	2	5	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4063621-4064325	Cluster_456	Pocillopora_meandrina_HIv1___Sc0000001	4063621	4064325	705	5920	703	0.9636824324324325	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	1408	26	5679	15	18	74	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4064498-4065026	Cluster_457	Pocillopora_meandrina_HIv1___Sc0000001	4064498	4065026	529	671	232	0.7093889716840537	.	UGUGACUGCUUGCAAUAAUAUUAUACA	114	9	622	6	4	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4118827-4119300	Cluster_458	Pocillopora_meandrina_HIv1___Sc0000001	4118827	4119300	474	552	205	0.030797101449275364	-	GAAGGCUGCGUGUUCAGGUCACGUCGGGGU	107	162	277	47	30	25	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4229586-4230014	Cluster_459	Pocillopora_meandrina_HIv1___Sc0000001	4229586	4230014	429	505	94	1.0	+	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	160	23	470	2	7	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4298315-4298771	Cluster_460	Pocillopora_meandrina_HIv1___Sc0000001	4298315	4298771	457	8283	560	0.0021731256791017745	-	ACGAUCUUCUGAGAUUAAGCCUUUGUU	2229	460	6447	321	394	220	441	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4313479-4313894	Cluster_461	Pocillopora_meandrina_HIv1___Sc0000001	4313479	4313894	416	159	117	0.0	-	GUGAGGGCAAACUGCAAGAAGACC	6	47	48	13	14	23	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4315116-4315571	Cluster_462	Pocillopora_meandrina_HIv1___Sc0000001	4315116	4315571	456	251	163	0.0	-	GCAGGGCUUUCAGCA	20	85	66	35	30	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4316894-4317370	Cluster_463	Pocillopora_meandrina_HIv1___Sc0000001	4316894	4317370	477	267	126	0.0	-	CCUCGUACGUAGGAAGAACAGGCA	21	30	108	25	11	49	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4317598-4318009	Cluster_464	Pocillopora_meandrina_HIv1___Sc0000001	4317598	4318009	412	156	120	0.0	-	CUCGUGAUUCCAGAGCAAUGAACGC	5	39	62	13	15	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4345267-4345692	Cluster_465	Pocillopora_meandrina_HIv1___Sc0000001	4345267	4345692	426	116	61	0.08620689655172414	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	9	3	98	2	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4361258-4364034	Cluster_466	Pocillopora_meandrina_HIv1___Sc0000001	4361258	4364034	2777	7703	1863	0.9275606906400103	+	UAUUCUGGAUACUGUUUAUAUUUAAAUGAC	289	48	7240	48	59	83	225	N	N	ath-miR5658
Pocillopora_meandrina_HIv1___Sc0000001:4364284-4365035	Cluster_467	Pocillopora_meandrina_HIv1___Sc0000001	4364284	4365035	752	1173	447	0.5933503836317136	.	GCGUUGUUUAAGCUGACAUCUUACUGAUA	92	10	1022	7	12	31	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4428344-4428761	Cluster_468	Pocillopora_meandrina_HIv1___Sc0000001	4428344	4428761	418	121	28	0.9917355371900827	+	UAAUAAGCGGAGGAAAAG	42	120	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4445438-4445865	Cluster_469	Pocillopora_meandrina_HIv1___Sc0000001	4445438	4445865	428	87	29	0.9655172413793104	+	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	34	8	73	4	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4479223-4480826	Cluster_470	Pocillopora_meandrina_HIv1___Sc0000001	4479223	4480826	1604	1693	768	0.12463083284111046	-	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	101	22	1529	5	15	29	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4480966-4482069	Cluster_471	Pocillopora_meandrina_HIv1___Sc0000001	4480966	4482069	1104	1775	551	0.04225352112676056	-	UAUAGUUCUUCUGUACUGGCUCAUUGUC	242	14	1708	7	7	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4483238-4485189	Cluster_472	Pocillopora_meandrina_HIv1___Sc0000001	4483238	4485189	1952	1797	779	0.054535336672231496	-	UGAGACUCUCUUGUUGUAAUAUUGCUUG	106	41	1647	23	6	31	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4593126-4593549	Cluster_473	Pocillopora_meandrina_HIv1___Sc0000001	4593126	4593549	424	137	63	0.0072992700729927005	-	UAAGAUCUGACUUUCACAUAGCUAGGA	9	7	125	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4744982-4745397	Cluster_474	Pocillopora_meandrina_HIv1___Sc0000001	4744982	4745397	416	91	42	1.0	+	UGAAUUUCUGAAGUGUGUUAUUGUGGU	15	2	86	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4872395-4873265	Cluster_475	Pocillopora_meandrina_HIv1___Sc0000001	4872395	4873265	871	709	168	0.5218617771509168	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	202	33	570	16	8	31	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5026269-5026686	Cluster_476	Pocillopora_meandrina_HIv1___Sc0000001	5026269	5026686	418	128	14	0.0	-	GUCCUGGCAGGGUCGCCA	93	126	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5036295-5036724	Cluster_477	Pocillopora_meandrina_HIv1___Sc0000001	5036295	5036724	430	293	74	0.9078498293515358	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUC	116	16	242	6	8	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5073837-5074560	Cluster_478	Pocillopora_meandrina_HIv1___Sc0000001	5073837	5074560	724	611	80	0.03764320785597381	-	UGGUAAAAUUCUGUUCAAAGUAGGCUU	101	2	603	1	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5093741-5094167	Cluster_479	Pocillopora_meandrina_HIv1___Sc0000001	5093741	5094167	427	363	29	0.0	-	UGGUAAAAUUCUGUUCAAAGUAGGCUU	98	0	363	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5129936-5130336	Cluster_480	Pocillopora_meandrina_HIv1___Sc0000001	5129936	5130336	401	165	91	0.47878787878787876	.	UUUGAGGGACUUGUCCACAUAAAGCGU	23	40	88	23	11	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5134576-5135003	Cluster_481	Pocillopora_meandrina_HIv1___Sc0000001	5134576	5135003	428	191	60	0.9528795811518325	+	UGCAUUGUAAUCGGGAUAGACCUAUUGA	45	5	174	3	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5144160-5145106	Cluster_482	Pocillopora_meandrina_HIv1___Sc0000001	5144160	5145106	947	4359	878	0.8027070428997477	+	UAUUUGAUCUGUCUACCUCUUUAAAGGA	257	58	3603	40	58	177	423	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5204084-5204505	Cluster_483	Pocillopora_meandrina_HIv1___Sc0000001	5204084	5204505	422	133	81	1.0	+	GACAAUGACGUUGAAGACUGUGACGGAGACC	8	18	71	7	8	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5482791-5483217	Cluster_484	Pocillopora_meandrina_HIv1___Sc0000001	5482791	5483217	427	134	37	0.0	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	49	8	120	0	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5590662-5591125	Cluster_485	Pocillopora_meandrina_HIv1___Sc0000001	5590662	5591125	464	1887	175	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	632	24	1838	1	2	16	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5600400-5600827	Cluster_486	Pocillopora_meandrina_HIv1___Sc0000001	5600400	5600827	428	130	42	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	40	2	126	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5608178-5608632	Cluster_487	Pocillopora_meandrina_HIv1___Sc0000001	5608178	5608632	455	396	114	1.0	+	GCCCACCCGGGGACGCCA	83	173	75	23	49	47	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5619912-5620338	Cluster_488	Pocillopora_meandrina_HIv1___Sc0000001	5619912	5620338	427	85	32	1.0	+	UCCUCGGUAGUAUAGUGGUAAGUAUCCC	25	16	69	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5625745-5626172	Cluster_489	Pocillopora_meandrina_HIv1___Sc0000001	5625745	5626172	428	215	19	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	153	1	213	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5635582-5636009	Cluster_490	Pocillopora_meandrina_HIv1___Sc0000001	5635582	5636009	428	598	73	0.9966555183946488	+	GUUUCUGUAGUGUAGUGG	156	404	174	9	3	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5637924-5638351	Cluster_491	Pocillopora_meandrina_HIv1___Sc0000001	5637924	5638351	428	222	15	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	174	0	222	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5669304-5669731	Cluster_492	Pocillopora_meandrina_HIv1___Sc0000001	5669304	5669731	428	237	16	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	185	0	237	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5689306-5689769	Cluster_493	Pocillopora_meandrina_HIv1___Sc0000001	5689306	5689769	464	655	90	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	202	9	640	1	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5693899-5694317	Cluster_494	Pocillopora_meandrina_HIv1___Sc0000001	5693899	5694317	419	489	28	0.9938650306748467	+	GUUUCUGUAGUGUAGUGG	247	486	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5746164-5746597	Cluster_495	Pocillopora_meandrina_HIv1___Sc0000001	5746164	5746597	434	1728	164	0.05381944444444445	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	542	257	1375	58	21	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5758933-5759356	Cluster_496	Pocillopora_meandrina_HIv1___Sc0000001	5758933	5759356	424	75	27	0.0	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	33	3	70	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5795956-5796536	Cluster_497	Pocillopora_meandrina_HIv1___Sc0000001	5795956	5796536	581	593	357	0.003372681281618887	-	ACUUUCGUCGGCCUAGACA	22	213	185	60	53	44	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5796550-5797171	Cluster_498	Pocillopora_meandrina_HIv1___Sc0000001	5796550	5797171	622	387	280	0.015503875968992248	-	CGUGGUGUGAAGUUGCAGCUCUCUGU	6	96	133	40	48	45	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5801163-5801729	Cluster_499	Pocillopora_meandrina_HIv1___Sc0000001	5801163	5801729	567	332	246	1.0	+	UUGCUCUUGUAGAUUGAUGUGAAGAAUGC	5	71	120	33	38	40	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5839178-5839672	Cluster_500	Pocillopora_meandrina_HIv1___Sc0000001	5839178	5839672	495	1512	282	0.9808201058201058	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	297	11	1444	13	6	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6251647-6253384	Cluster_501	Pocillopora_meandrina_HIv1___Sc0000001	6251647	6253384	1738	2751	1060	0.9538349691021447	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	100	21	2622	5	18	49	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6367471-6367897	Cluster_502	Pocillopora_meandrina_HIv1___Sc0000001	6367471	6367897	427	170	71	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	17	0	165	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6400836-6401347	Cluster_503	Pocillopora_meandrina_HIv1___Sc0000001	6400836	6401347	512	263	61	0.4296577946768061	.	UCCGAGUGCUGCACCUUCUUUCAUGGGA	73	7	208	6	8	22	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6419212-6419640	Cluster_504	Pocillopora_meandrina_HIv1___Sc0000001	6419212	6419640	429	404	30	0.034653465346534656	-	UGACUUGAUUUUUUACGGCAUUUUGUAUC	330	7	393	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6511512-6512099	Cluster_505	Pocillopora_meandrina_HIv1___Sc0000001	6511512	6512099	588	595	202	0.7126050420168067	.	UCUUCCGGUCUGUUUUCGCUUUUUCUGGA	65	12	534	2	5	21	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6593781-6594210	Cluster_506	Pocillopora_meandrina_HIv1___Sc0000001	6593781	6594210	430	840	81	0.9976190476190476	+	UCUCAACCCAGUUCCAAGAUCACACCGUUA	305	22	816	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6854403-6854831	Cluster_507	Pocillopora_meandrina_HIv1___Sc0000001	6854403	6854831	429	165	33	0.012121212121212121	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	88	0	163	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6984277-6984706	Cluster_508	Pocillopora_meandrina_HIv1___Sc0000001	6984277	6984706	430	665	29	1.0	+	GACUGGUGCAUUGCUUGUCGGCGACUCAUG	498	1	662	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6989290-6989709	Cluster_509	Pocillopora_meandrina_HIv1___Sc0000001	6989290	6989709	420	91	38	0.9340659340659341	+	UCUGUAAACUCCGUAUUUAACAACAA	9	2	89	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7006571-7007371	Cluster_510	Pocillopora_meandrina_HIv1___Sc0000001	7006571	7007371	801	741	307	0.8313090418353576	+	UGAAUCGUGGGCAAAUGAUAUUCAAUGAUC	29	10	695	3	5	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7068685-7069113	Cluster_511	Pocillopora_meandrina_HIv1___Sc0000001	7068685	7069113	429	133	46	0.9924812030075187	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	23	1	131	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7069393-7070084	Cluster_512	Pocillopora_meandrina_HIv1___Sc0000001	7069393	7070084	692	738	334	0.8238482384823849	+	UGAACUAAACCAUUUACUUGCAACUGGAGU	38	6	688	4	7	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7070254-7071041	Cluster_513	Pocillopora_meandrina_HIv1___Sc0000001	7070254	7071041	788	899	346	0.9365962180200222	+	UCCGUGACACAACGACUUUGCCUUGCUU	108	5	875	3	3	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7075985-7076412	Cluster_514	Pocillopora_meandrina_HIv1___Sc0000001	7075985	7076412	428	100	15	0.03	-	UACCAAGGUCUUGUAGUCUAGUACAACU	60	0	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7279602-7280015	Cluster_515	Pocillopora_meandrina_HIv1___Sc0000001	7279602	7280015	414	108	53	0.3333333333333333	.	GUAGAAGCAAGAGCUUGAGACA	22	50	10	13	25	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7467089-7467518	Cluster_516	Pocillopora_meandrina_HIv1___Sc0000001	7467089	7467518	430	389	87	0.043701799485861184	-	UUGAACGUCACUGUCUGUCGGCGAUACGGA	64	7	359	3	10	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7469649-7470757	Cluster_517	Pocillopora_meandrina_HIv1___Sc0000001	7469649	7470757	1109	1966	570	0.503560528992879	.	ACAUGACAAAACUACGAGCUUAGAAGA	313	7	1716	11	8	72	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7472170-7472935	Cluster_518	Pocillopora_meandrina_HIv1___Sc0000001	7472170	7472935	766	1128	452	0.3102836879432624	.	CUACAGAAAAUACAAACCGAUUGU	39	7	993	3	9	12	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7487307-7488525	Cluster_519	Pocillopora_meandrina_HIv1___Sc0000001	7487307	7488525	1219	1308	439	0.441131498470948	.	UUGACGAGUAUGGUGUACGAAAGAUGAGU	140	6	1211	17	13	13	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7491752-7493058	Cluster_520	Pocillopora_meandrina_HIv1___Sc0000001	7491752	7493058	1307	6263	1663	0.30975570812709563	.	AGGUGUAGAAUGUAAAAAGCAGCA	189	105	5056	61	47	288	706	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7494153-7495445	Cluster_521	Pocillopora_meandrina_HIv1___Sc0000001	7494153	7495445	1293	1872	854	0.7430555555555556	.	UAAUCUCACUAGUGUCAAAGUAAACUCUUG	85	36	1690	12	17	26	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7498872-7499299	Cluster_522	Pocillopora_meandrina_HIv1___Sc0000001	7498872	7499299	428	88	36	0.011363636363636364	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	30	0	87	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7508339-7508769	Cluster_523	Pocillopora_meandrina_HIv1___Sc0000001	7508339	7508769	431	636	199	0.09119496855345911	-	UAACGUAGUGGUAUCCAUUGAACAAGUUC	97	4	541	2	4	11	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7509029-7510080	Cluster_524	Pocillopora_meandrina_HIv1___Sc0000001	7509029	7510080	1052	687	344	0.23435225618631733	.	UGAUCAUAUAUUAUUCUAUCUGGAGA	25	7	634	4	7	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7511921-7512335	Cluster_525	Pocillopora_meandrina_HIv1___Sc0000001	7511921	7512335	415	286	172	0.8076923076923077	+	UCUGUUCGCUUCCGUCGGGUUUUGGGC	37	9	254	4	2	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7512926-7513351	Cluster_526	Pocillopora_meandrina_HIv1___Sc0000001	7512926	7513351	426	178	89	0.0	-	UGAGCUACUGUGUGACGCCGGUCUUACUUU	19	0	172	0	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7520229-7520819	Cluster_527	Pocillopora_meandrina_HIv1___Sc0000001	7520229	7520819	591	12789	461	0.05059035108296192	-	UAAAAUCGUUUCAAUGCUCUGAGCACUGUU	2598	8	12550	19	8	134	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7521100-7521526	Cluster_528	Pocillopora_meandrina_HIv1___Sc0000001	7521100	7521526	427	153	52	0.20261437908496732	.	UCAGAAUUGGUGGGCUCAGUGGACGGCC	29	2	137	0	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7522572-7523024	Cluster_529	Pocillopora_meandrina_HIv1___Sc0000001	7522572	7523024	453	550	130	0.0036363636363636364	-	UCCGAUUUAAAAGAUUCUUUGUUUCCAGC	114	3	517	1	18	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7523238-7523895	Cluster_530	Pocillopora_meandrina_HIv1___Sc0000001	7523238	7523895	658	867	223	0.029988465974625143	-	UAGAAUAAAGCUGAUCUGCAGUUACUGC	192	5	838	1	6	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7529188-7530207	Cluster_531	Pocillopora_meandrina_HIv1___Sc0000001	7529188	7530207	1020	2149	433	0.0018613308515588647	-	UAAUGAUUUCCGUUCUAGCAGCCUCUGC	330	4	2115	4	4	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7533042-7534289	Cluster_532	Pocillopora_meandrina_HIv1___Sc0000001	7533042	7534289	1248	11368	1492	0.029028852920478538	-	UCUGACUGACUAACAGGAUAUCUGCUUC	787	57	11011	18	36	87	159	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7538234-7538725	Cluster_533	Pocillopora_meandrina_HIv1___Sc0000001	7538234	7538725	492	912	179	0.020833333333333332	-	UGUAACUCUAAACUUUGGAGCUUGGAUG	147	124	738	1	7	3	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7538914-7539332	Cluster_534	Pocillopora_meandrina_HIv1___Sc0000001	7538914	7539332	419	160	57	0.03125	-	UGAUAUAAUUAUGAAGGCUUUUGAAUGA	28	0	156	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7540437-7540867	Cluster_535	Pocillopora_meandrina_HIv1___Sc0000001	7540437	7540867	431	207	79	0.004830917874396135	-	UCGUUCGAUUUGGGGGAAAUGGAUCCUGC	33	2	199	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7540920-7541875	Cluster_536	Pocillopora_meandrina_HIv1___Sc0000001	7540920	7541875	956	635	268	0.006299212598425197	-	UGUUCUAACUGUUAUCUUUGUGUUCCAGCU	56	5	618	0	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7542065-7542493	Cluster_537	Pocillopora_meandrina_HIv1___Sc0000001	7542065	7542493	429	137	68	0.014598540145985401	-	UCGGAAAAUUGUAUGUCGUGUGUGCCCUGU	18	2	130	1	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7542514-7542923	Cluster_538	Pocillopora_meandrina_HIv1___Sc0000001	7542514	7542923	410	297	135	0.006734006734006734	-	UGCUUUUGGUUUGUGGAUGGAACUGUCCGC	40	0	290	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7544193-7544782	Cluster_539	Pocillopora_meandrina_HIv1___Sc0000001	7544193	7544782	590	509	142	0.007858546168958742	-	UAAUCUCUGGUUCACUUUAGAUAUCACAUG	195	2	501	0	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7546737-7547162	Cluster_540	Pocillopora_meandrina_HIv1___Sc0000001	7546737	7547162	426	93	30	0.08602150537634409	-	UGUUCCAGUUGUACAUCAGAUACCUCU	17	0	84	0	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7550204-7550617	Cluster_541	Pocillopora_meandrina_HIv1___Sc0000001	7550204	7550617	414	212	97	0.07075471698113207	-	UGAAGAAACGAGACUCGUUUAACGAAACGA	34	6	190	0	4	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7558282-7559614	Cluster_542	Pocillopora_meandrina_HIv1___Sc0000001	7558282	7559614	1333	1759	651	0.0005685048322910744	-	UAGAAAUGACGACUGCAGUUUUUACAUGC	67	20	1698	6	7	11	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7559618-7560418	Cluster_543	Pocillopora_meandrina_HIv1___Sc0000001	7559618	7560418	801	731	247	0.0013679890560875513	-	UCUUCCAUGACCAACCACA	66	102	611	6	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7560573-7561712	Cluster_544	Pocillopora_meandrina_HIv1___Sc0000001	7560573	7561712	1140	1718	318	0.004074505238649592	-	UCCAUCUUUCCGUCUUUGGUUCACCUC	509	52	1648	4	1	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7562095-7562863	Cluster_545	Pocillopora_meandrina_HIv1___Sc0000001	7562095	7562863	769	940	351	0.0010638297872340426	-	UGAACUGUGAAAUGUGUAUUAAACACCCUAC	92	6	903	5	5	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7563001-7563428	Cluster_546	Pocillopora_meandrina_HIv1___Sc0000001	7563001	7563428	428	143	51	0.0	-	UUUUACAUUUUCCCUUCUCCUUCCAGUUU	24	2	135	2	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7564613-7565042	Cluster_547	Pocillopora_meandrina_HIv1___Sc0000001	7564613	7565042	430	217	59	0.0	-	AGUCCAUCCAAACUUUUGUAACUUAAUUUU	85	0	212	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7566258-7566688	Cluster_548	Pocillopora_meandrina_HIv1___Sc0000001	7566258	7566688	431	148	60	0.0	-	UGUAAAUUGUGUGGAAGGUCUAGCAUUUGUU	26	1	143	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7569379-7569807	Cluster_549	Pocillopora_meandrina_HIv1___Sc0000001	7569379	7569807	429	216	94	0.0	-	UUUGAGCUGAGAACUUUUUAAUUCUGUU	28	6	202	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7570177-7572160	Cluster_550	Pocillopora_meandrina_HIv1___Sc0000001	7570177	7572160	1984	6965	1706	0.22928930366116296	.	UGGACGUACAUGCAGGAUUUGUCAUAC	820	58	6106	40	54	196	511	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7573577-7574770	Cluster_551	Pocillopora_meandrina_HIv1___Sc0000001	7573577	7574770	1194	3227	886	0.7493027579795476	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	611	32	2914	19	130	48	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7577524-7577952	Cluster_552	Pocillopora_meandrina_HIv1___Sc0000001	7577524	7577952	429	190	20	0.005263157894736842	-	UUGACUGACAGAAGAUCUGGAAACUGAAG	63	3	185	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7578198-7579805	Cluster_553	Pocillopora_meandrina_HIv1___Sc0000001	7578198	7579805	1608	20526	2888	0.10956835233362565	-	UACUUUCUGAUUGACUUGGAGUGUGGGG	1053	275	18184	138	149	502	1278	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7592653-7593081	Cluster_554	Pocillopora_meandrina_HIv1___Sc0000001	7592653	7593081	429	156	69	0.967948717948718	+	UUGUUAACUUUGUCUACCAGAUCUUAUC	11	19	127	4	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7595171-7595581	Cluster_555	Pocillopora_meandrina_HIv1___Sc0000001	7595171	7595581	411	144	60	0.5763888888888888	.	UAGGUAAAGUCUUUCUGUUAACAGAGUU	16	11	112	4	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7909734-7910162	Cluster_556	Pocillopora_meandrina_HIv1___Sc0000001	7909734	7910162	429	189	88	0.9947089947089947	+	AUCUGAACAAAAGAAAAGACACCAAGGAG	47	15	142	8	8	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8154885-8155313	Cluster_557	Pocillopora_meandrina_HIv1___Sc0000001	8154885	8155313	429	229	65	0.9694323144104804	+	UUGGAUUUAGGUGAGCUUGAAGAUUGUA	34	9	214	4	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8158111-8159082	Cluster_558	Pocillopora_meandrina_HIv1___Sc0000001	8158111	8159082	972	875	300	0.7497142857142857	.	UCACACUUUUGUCUCGCGAGUCGUUGGCA	115	13	799	10	17	8	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8214007-8214547	Cluster_559	Pocillopora_meandrina_HIv1___Sc0000001	8214007	8214547	541	575	140	0.7756521739130435	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	181	1	559	2	0	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8221612-8222035	Cluster_560	Pocillopora_meandrina_HIv1___Sc0000001	8221612	8222035	424	264	54	0.05303030303030303	-	AUGGACAGAACACAGGAAGUGCU	65	4	85	1	14	124	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8242888-8243317	Cluster_561	Pocillopora_meandrina_HIv1___Sc0000001	8242888	8243317	430	295	108	0.8949152542372881	+	UCAGCAAUACCUAAUUCUUCGUGUAGACGU	58	0	269	0	0	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8263506-8263934	Cluster_562	Pocillopora_meandrina_HIv1___Sc0000001	8263506	8263934	429	91	26	0.945054945054945	+	UAACUUCAACUAGAUCAAAAUGCUCGUGA	58	1	87	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8270842-8271268	Cluster_563	Pocillopora_meandrina_HIv1___Sc0000001	8270842	8271268	427	192	112	0.10416666666666667	-	UAUUCCAAGAUUGGCCGUACCAGAGACA	22	2	184	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8286803-8289064	Cluster_564	Pocillopora_meandrina_HIv1___Sc0000001	8286803	8289064	2262	9063	2351	0.06068630696237449	-	UAUGUACGAUUUUAACUGGAAGAAACGUUU	539	155	8515	28	74	140	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8293722-8294136	Cluster_565	Pocillopora_meandrina_HIv1___Sc0000001	8293722	8294136	415	136	74	0.0	-	UAUGUCACUGGAUCUAGUCGCUCGCACACU	10	0	130	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8294312-8294868	Cluster_566	Pocillopora_meandrina_HIv1___Sc0000001	8294312	8294868	557	491	202	0.020366598778004074	-	UGGAACCCUUUACGAUUGACAACAUCGUUU	61	1	473	1	2	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8295500-8295920	Cluster_567	Pocillopora_meandrina_HIv1___Sc0000001	8295500	8295920	421	238	118	0.5504201680672269	.	GAAGGUUCCAUCUGCUUCAUUCUG	20	2	173	1	2	4	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8306212-8307604	Cluster_568	Pocillopora_meandrina_HIv1___Sc0000001	8306212	8307604	1393	2591	706	0.057120802778849865	-	UGAUUAUUGCGUCUUCAGUGACUUCUGA	273	23	2430	10	32	26	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8320150-8320577	Cluster_569	Pocillopora_meandrina_HIv1___Sc0000001	8320150	8320577	428	106	10	0.009433962264150943	-	UAACCCGAGAACUGACACGUGAGUAGUC	75	0	94	0	0	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8324681-8325107	Cluster_570	Pocillopora_meandrina_HIv1___Sc0000001	8324681	8325107	427	94	14	0.0	-	UAACCCGAGAACUGACACGUGAGUAGUC	54	0	84	0	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8337585-8338062	Cluster_571	Pocillopora_meandrina_HIv1___Sc0000001	8337585	8338062	478	265	152	0.18490566037735848	-	UGAUUUGUACGACCCACUCCUGUUAAC	13	12	214	4	3	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8338134-8338823	Cluster_572	Pocillopora_meandrina_HIv1___Sc0000001	8338134	8338823	690	487	241	0.08008213552361396	-	UAAUCAUCUUCGAGUCGCGGAUACCUGA	62	9	438	9	0	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8340034-8340819	Cluster_573	Pocillopora_meandrina_HIv1___Sc0000001	8340034	8340819	786	1898	459	0.011591148577449948	-	UGCAUUCUCAAGUCGUGCUCUGUAACGG	136	26	1753	8	12	14	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8340966-8341393	Cluster_574	Pocillopora_meandrina_HIv1___Sc0000001	8340966	8341393	428	193	72	0.0051813471502590676	-	UCAGACGUGAACUGUGGACCAUUAUC	20	2	190	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8343194-8343622	Cluster_575	Pocillopora_meandrina_HIv1___Sc0000001	8343194	8343622	429	199	49	0.0	-	UAAAGCUUGAACCUUCCAACACGUCCGACA	46	3	175	5	7	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8346606-8347331	Cluster_576	Pocillopora_meandrina_HIv1___Sc0000001	8346606	8347331	726	768	302	0.2708333333333333	.	UGAGAUUUCUGCAUUUCCUCAAGCACGU	71	6	660	6	10	34	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8351582-8352234	Cluster_577	Pocillopora_meandrina_HIv1___Sc0000001	8351582	8352234	653	322	98	0.0	-	CCAGUAUCUGUUUGUUUAGUUCUAGAAUAUC	56	0	308	0	3	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8355697-8356143	Cluster_578	Pocillopora_meandrina_HIv1___Sc0000001	8355697	8356143	447	272	106	0.0	-	UUGGCGUGUUUAAGUACUUCUGAUCUUGAC	57	1	269	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8359679-8360122	Cluster_579	Pocillopora_meandrina_HIv1___Sc0000001	8359679	8360122	444	452	131	0.37831858407079644	.	ACAAGAAUCAAGGAAACUCAACUG	47	1	309	2	5	54	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8364194-8364619	Cluster_580	Pocillopora_meandrina_HIv1___Sc0000001	8364194	8364619	426	83	38	0.012048192771084338	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	19	0	83	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8370312-8370827	Cluster_581	Pocillopora_meandrina_HIv1___Sc0000001	8370312	8370827	516	791	212	0.6093552465233881	.	UGGAUUAUCAACAAUUGGAAAGAAGGACA	105	14	701	3	8	17	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8371231-8372173	Cluster_582	Pocillopora_meandrina_HIv1___Sc0000001	8371231	8372173	943	1330	536	0.0030075187969924814	-	UGGUCUUUCUCGUCUGCUUUCUCGAUGGC	73	10	1226	9	4	50	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8373184-8373893	Cluster_583	Pocillopora_meandrina_HIv1___Sc0000001	8373184	8373893	710	754	236	0.0	-	UGAGUUUGUAGAAGCAAUUUGCCAUCUGC	73	8	731	1	5	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8375664-8376083	Cluster_584	Pocillopora_meandrina_HIv1___Sc0000001	8375664	8376083	420	128	69	0.0078125	-	UUCGAACGUUCCAACGACUGGCAAAGGCU	19	1	120	0	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8379019-8379428	Cluster_585	Pocillopora_meandrina_HIv1___Sc0000001	8379019	8379428	410	106	51	0.009433962264150943	-	UGUAAGUGUAGCCCUGAGUAUUGAUCAGC	24	1	99	3	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8384609-8385719	Cluster_586	Pocillopora_meandrina_HIv1___Sc0000001	8384609	8385719	1111	928	284	0.004310344827586207	-	UUCUUGUAUUCGAAGGCUGGCUGCAACUGC	139	9	885	4	7	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8386118-8387061	Cluster_587	Pocillopora_meandrina_HIv1___Sc0000001	8386118	8387061	944	7682	809	0.0031241864097891173	-	UCGACAUCUUUUUGUGUGGGUCUACUGC	737	57	7513	12	12	17	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8394040-8394753	Cluster_588	Pocillopora_meandrina_HIv1___Sc0000001	8394040	8394753	714	626	163	0.0	-	UAUCUUCUCGAGACUCAGGAAUUCCAGUGA	116	6	604	4	3	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8400205-8400676	Cluster_589	Pocillopora_meandrina_HIv1___Sc0000001	8400205	8400676	472	412	119	0.3276699029126214	.	CGUGUGAAUAUAGUAGCGUUGAUU	88	2	277	4	0	7	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8401927-8402354	Cluster_590	Pocillopora_meandrina_HIv1___Sc0000001	8401927	8402354	428	264	128	0.007575757575757576	-	UGUAUCAAAGGACUUCUUCCAGGUGGGAUA	32	3	256	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8403550-8403979	Cluster_591	Pocillopora_meandrina_HIv1___Sc0000001	8403550	8403979	430	151	65	0.0	-	UGUGUCUUUGCCACUAGAUGACUGAUGGUU	30	1	146	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8404969-8405395	Cluster_592	Pocillopora_meandrina_HIv1___Sc0000001	8404969	8405395	427	100	50	0.01	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	19	0	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8406664-8407092	Cluster_593	Pocillopora_meandrina_HIv1___Sc0000001	8406664	8407092	429	248	92	0.0	-	UGUUUUGUUCUGUGUCGCAUUCUGCAGGC	71	3	243	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8409239-8409797	Cluster_594	Pocillopora_meandrina_HIv1___Sc0000001	8409239	8409797	559	539	217	0.0018552875695732839	-	UGUGAUCACCACUGUCAAAGACAUAUUGG	32	2	530	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8410875-8411343	Cluster_595	Pocillopora_meandrina_HIv1___Sc0000001	8410875	8411343	469	347	164	0.0	-	UCUUCCUUAAUUAUUUUCAGACUGGUCCUA	22	23	291	4	1	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8411850-8412347	Cluster_596	Pocillopora_meandrina_HIv1___Sc0000001	8411850	8412347	498	358	129	0.3743016759776536	.	GACCAAAAAAAGAAGAAC	34	120	213	13	6	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8412512-8412930	Cluster_597	Pocillopora_meandrina_HIv1___Sc0000001	8412512	8412930	419	133	72	0.0	-	UGCUACGUUUGACUGACGUUUAUUGGGC	28	5	125	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8413277-8413706	Cluster_598	Pocillopora_meandrina_HIv1___Sc0000001	8413277	8413706	430	303	65	0.19141914191419143	-	UGUUACGAAUCAAGAUCUAUUAAGCUCAAU	123	2	301	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8417245-8418232	Cluster_599	Pocillopora_meandrina_HIv1___Sc0000001	8417245	8418232	988	3341	664	0.04399880275366657	-	UUUUCAAGGAGGAUGUAUCCACUGUCGUU	424	52	3110	17	64	43	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8418536-8418960	Cluster_600	Pocillopora_meandrina_HIv1___Sc0000001	8418536	8418960	425	200	49	0.64	.	AAUUGUGAUUUUGUUCAUUGAAUUUAG	40	2	182	2	1	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8419703-8420739	Cluster_601	Pocillopora_meandrina_HIv1___Sc0000001	8419703	8420739	1037	476	200	0.046218487394957986	-	UCCGAUCACGCUUGAAGUAUUUCAGAAAC	48	8	442	2	4	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8667430-8667854	Cluster_602	Pocillopora_meandrina_HIv1___Sc0000001	8667430	8667854	425	82	36	0.9634146341463414	+	UGUGUAGAUAUGUCUUUUGGACAGGA	16	1	79	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8680444-8680874	Cluster_603	Pocillopora_meandrina_HIv1___Sc0000001	8680444	8680874	431	9613	363	0.0008322063871840217	-	GCGUUGGUGGUAUAGUGGUGAGCAUAGCU	3267	249	9144	22	40	114	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8689945-8690363	Cluster_604	Pocillopora_meandrina_HIv1___Sc0000001	8689945	8690363	419	111	47	0.0	-	GCCUCUGUAGCGUAAUGGA	48	70	20	7	5	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8708146-8709110	Cluster_605	Pocillopora_meandrina_HIv1___Sc0000001	8708146	8709110	965	12059	492	0.9907952566547806	+	UGACGUAUCUCUUCCCCGGGCUAUUGAGC	2985	111	11591	60	164	63	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8725849-8726273	Cluster_606	Pocillopora_meandrina_HIv1___Sc0000001	8725849	8726273	425	116	46	0.0	-	UUUUCUUUUGUUAACCUUAUUACUGAGCC	13	0	116	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8726443-8726870	Cluster_607	Pocillopora_meandrina_HIv1___Sc0000001	8726443	8726870	428	172	45	0.0	-	UGAGUACACUGAUCAGUCGAAUACUGGC	45	1	169	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8740729-8741768	Cluster_608	Pocillopora_meandrina_HIv1___Sc0000001	8740729	8741768	1040	1537	254	0.008458035133376708	-	UCGGUUCCAUGAAUUCAGACAGUUUUG	355	12	1488	10	2	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8744793-8745221	Cluster_609	Pocillopora_meandrina_HIv1___Sc0000001	8744793	8745221	429	152	79	0.006578947368421052	-	UGUACAUCUUCCUGUUGGACACCCUGUUC	19	1	144	0	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8814853-8815264	Cluster_610	Pocillopora_meandrina_HIv1___Sc0000001	8814853	8815264	412	102	55	0.0	-	UUGAACUCGACCCAGUCA	10	13	86	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8852220-8852908	Cluster_611	Pocillopora_meandrina_HIv1___Sc0000001	8852220	8852908	689	570	193	0.005263157894736842	-	UCACAAACUGGAAAGUUAAGGGUGCAGGAG	102	3	556	1	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8852947-8853376	Cluster_612	Pocillopora_meandrina_HIv1___Sc0000001	8852947	8853376	430	543	96	0.034990791896869246	-	UAAAGCAAGACAACUAACUAGAAUGCGGUU	300	30	475	4	3	7	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8856157-8856582	Cluster_613	Pocillopora_meandrina_HIv1___Sc0000001	8856157	8856582	426	87	31	0.0	-	UGAAUCAACAAUAUAACAGAAACUCGUG	32	0	86	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8857011-8857439	Cluster_614	Pocillopora_meandrina_HIv1___Sc0000001	8857011	8857439	429	128	43	0.0	-	UCCGAACUUUCCUGGUGUUGAUAGCCACA	27	2	125	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8858958-8859384	Cluster_615	Pocillopora_meandrina_HIv1___Sc0000001	8858958	8859384	427	148	53	0.0	-	UGCCAACGAUCUUCGGUCACGGGGAGCCA	37	0	141	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8861032-8861837	Cluster_616	Pocillopora_meandrina_HIv1___Sc0000001	8861032	8861837	806	672	262	0.3794642857142857	.	UCCGUAAUCUUGAAAUAUCUGAAUUCGCA	64	16	619	13	2	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8863493-8864217	Cluster_617	Pocillopora_meandrina_HIv1___Sc0000001	8863493	8864217	725	424	196	0.0660377358490566	-	UGAUGAUCUUGAAUUUUGGCGCUCCCAGA	34	7	399	2	1	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8867678-8868103	Cluster_618	Pocillopora_meandrina_HIv1___Sc0000001	8867678	8868103	426	132	51	0.0	-	UGAGUAAAGCUUCUGAUAUGAUAUGGC	28	2	124	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8870437-8870957	Cluster_619	Pocillopora_meandrina_HIv1___Sc0000001	8870437	8870957	521	405	126	0.0	-	CAUGUGCUGAUUUCUGGUCUUAAAAUGGU	107	7	392	1	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9161082-9161502	Cluster_620	Pocillopora_meandrina_HIv1___Sc0000001	9161082	9161502	421	95	46	0.9368421052631579	+	UGAUUACACUGUCAAAAAUUCCUGCGAA	16	9	71	1	4	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9727492-9728055	Cluster_621	Pocillopora_meandrina_HIv1___Sc0000001	9727492	9728055	564	402	200	0.0	-	UAAAAAGCCUGGACCGAGCAAUAUGAAAUU	19	4	385	1	7	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9729005-9729434	Cluster_622	Pocillopora_meandrina_HIv1___Sc0000001	9729005	9729434	430	460	170	0.0	-	UGUUUCCAAUCGAUUCAGCGUGGCUGUUUU	60	5	437	2	3	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9769282-9770303	Cluster_623	Pocillopora_meandrina_HIv1___Sc0000001	9769282	9770303	1022	394	176	0.9771573604060914	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	48	2	375	2	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9819040-9819870	Cluster_624	Pocillopora_meandrina_HIv1___Sc0000001	9819040	9819870	831	1638	144	0.017094017094017096	-	UUCAUGCUCUUGUUGUUCGACUGAACAAA	478	32	1566	3	7	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9828736-9829165	Cluster_625	Pocillopora_meandrina_HIv1___Sc0000001	9828736	9829165	430	153	52	0.006535947712418301	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	28	0	152	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9992821-9993241	Cluster_626	Pocillopora_meandrina_HIv1___Sc0000001	9992821	9993241	421	121	61	0.8512396694214877	+	UAACAGCUUAAGACGCGAACGAG	21	9	27	13	12	43	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10374967-10375503	Cluster_627	Pocillopora_meandrina_HIv1___Sc0000001	10374967	10375503	537	3577	474	1.0	+	CACUGGAUCGAGGGAAACCAUGAAUUU	632	668	1737	111	537	361	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10500530-10500944	Cluster_628	Pocillopora_meandrina_HIv1___Sc0000001	10500530	10500944	415	88	31	0.2159090909090909	.	UGAUAACUUGUACGAGUACCGUUUACA	38	2	76	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10501153-10501568	Cluster_629	Pocillopora_meandrina_HIv1___Sc0000001	10501153	10501568	416	153	78	0.7450980392156863	.	UUCUUUCCUUUGGUGCCUUUCUAUGGUU	11	3	120	5	4	2	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10532259-10532801	Cluster_630	Pocillopora_meandrina_HIv1___Sc0000001	10532259	10532801	543	1560	225	0.0391025641025641	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	332	13	1518	3	7	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10534703-10536304	Cluster_631	Pocillopora_meandrina_HIv1___Sc0000001	10534703	10536304	1602	5429	1005	0.08767728863510775	-	UGGGAAACGGCUGUACUCGUCUAUGACG	640	24	5057	16	56	91	185	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10536547-10536974	Cluster_632	Pocillopora_meandrina_HIv1___Sc0000001	10536547	10536974	428	172	48	0.023255813953488372	-	UGAUUAAGAACGAUAAACUGGAACGUG	53	2	165	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10605374-10605803	Cluster_633	Pocillopora_meandrina_HIv1___Sc0000001	10605374	10605803	430	307	103	0.6026058631921825	.	UGCAUCUUCACUGCCACCUACAUUCUGUGU	79	2	263	3	0	2	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10674208-10675151	Cluster_634	Pocillopora_meandrina_HIv1___Sc0000001	10674208	10675151	944	921	237	0.07709011943539631	-	UGCUGUAUUUAAUUCUUCGAUCUUCUUAC	127	15	826	1	9	56	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10678512-10678939	Cluster_635	Pocillopora_meandrina_HIv1___Sc0000001	10678512	10678939	428	354	105	0.0423728813559322	-	UAAGACAUUGGCAUACUUGACAUACA	62	2	338	4	0	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10704605-10705792	Cluster_636	Pocillopora_meandrina_HIv1___Sc0000001	10704605	10705792	1188	3518	751	0.3166571915861285	.	UAUUUCAUCUUUGUCCACUGCGUGCCAA	460	17	3285	11	17	79	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10706039-10706594	Cluster_637	Pocillopora_meandrina_HIv1___Sc0000001	10706039	10706594	556	482	220	0.1037344398340249	-	UAAGUGAACAGUUUUUGACAACCAACGGU	21	8	454	2	6	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10706958-10707451	Cluster_638	Pocillopora_meandrina_HIv1___Sc0000001	10706958	10707451	494	542	185	0.07380073800738007	-	UGAAUCCGUAGAAAAUGCUUUGCUGAGU	50	5	501	9	0	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10709456-10709885	Cluster_639	Pocillopora_meandrina_HIv1___Sc0000001	10709456	10709885	430	265	71	0.0	-	UGCGUCGAUUUGUUCAACCCAAUGGAGAGC	63	0	264	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10722855-10723272	Cluster_640	Pocillopora_meandrina_HIv1___Sc0000001	10722855	10723272	418	103	50	0.0	-	UGACGAUUUUCGCGGCUCGAUUUUGU	12	1	99	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10737729-10739506	Cluster_641	Pocillopora_meandrina_HIv1___Sc0000001	10737729	10739506	1778	2728	1064	0.0469208211143695	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	94	17	2580	9	20	54	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10743364-10744210	Cluster_642	Pocillopora_meandrina_HIv1___Sc0000001	10743364	10744210	847	856	254	0.011682242990654205	-	UGCUAACACUUGUAGUCUGACCAGCCUUU	116	2	842	0	0	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10744526-10745157	Cluster_643	Pocillopora_meandrina_HIv1___Sc0000001	10744526	10745157	632	390	172	0.06666666666666667	-	UCUUCUGUUUGUAAGUCUGCUCCGUCUGC	24	1	361	2	0	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10746082-10746505	Cluster_644	Pocillopora_meandrina_HIv1___Sc0000001	10746082	10746505	424	144	77	0.027777777777777776	-	UAACUCACCGUGACUUUAUACACCUUCUUU	25	2	140	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10746516-10746934	Cluster_645	Pocillopora_meandrina_HIv1___Sc0000001	10746516	10746934	419	231	146	0.06493506493506493	-	UCAGUUCUGCUUAGAUUAUGGAUGCCGUG	9	2	204	0	1	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10747636-10748066	Cluster_646	Pocillopora_meandrina_HIv1___Sc0000001	10747636	10748066	431	298	63	0.0	-	UAGGAUUUAUUUGAGAUGCCCGUACGCUCUU	131	0	292	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10748750-10749587	Cluster_647	Pocillopora_meandrina_HIv1___Sc0000001	10748750	10749587	838	889	235	0.9617547806524185	+	UGAUUUCGCGUGCUCAACUCCGAUAAGAGC	153	3	880	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10763282-10763715	Cluster_648	Pocillopora_meandrina_HIv1___Sc0000001	10763282	10763715	434	1312	245	0.019054878048780487	-	UAUCUUCUGUAUGAUUUGGCUCGGUUGA	263	13	1245	31	6	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10771285-10771715	Cluster_649	Pocillopora_meandrina_HIv1___Sc0000001	10771285	10771715	431	145	46	0.006896551724137931	-	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	57	0	145	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10779540-10779965	Cluster_650	Pocillopora_meandrina_HIv1___Sc0000001	10779540	10779965	426	164	85	0.036585365853658534	-	UAACCGUAGCUCUGCUUCAAAUCUUUAACGU	19	0	158	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10783368-10784774	Cluster_651	Pocillopora_meandrina_HIv1___Sc0000001	10783368	10784774	1407	2769	832	0.30444203683640303	.	UCCGGAUCUUUUCUUGAACAAACAAAGUUU	148	24	2563	16	22	49	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10785297-10785725	Cluster_652	Pocillopora_meandrina_HIv1___Sc0000001	10785297	10785725	429	136	49	0.029411764705882353	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	23	0	135	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10789786-10790294	Cluster_653	Pocillopora_meandrina_HIv1___Sc0000001	10789786	10790294	509	1936	283	0.05836776859504132	-	UGAUUUCUGUAUUUAGUGUUGGCUGAUAC	730	4	1847	2	17	15	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10792415-10792844	Cluster_654	Pocillopora_meandrina_HIv1___Sc0000001	10792415	10792844	430	116	29	0.11206896551724138	-	UAGGAAAAGAUAUACACUACAAAGAAAAGU	63	2	114	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10824346-10824773	Cluster_655	Pocillopora_meandrina_HIv1___Sc0000001	10824346	10824773	428	83	28	0.9879518072289156	+	UCCUCGGUAGUAUGGUGGUGAGUAUCCC	21	3	76	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10844844-10845261	Cluster_656	Pocillopora_meandrina_HIv1___Sc0000001	10844844	10845261	418	166	20	0.012048192771084338	-	GUUUCUGUAGUGUAGUGU	63	165	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10847770-10848195	Cluster_657	Pocillopora_meandrina_HIv1___Sc0000001	10847770	10848195	426	88	32	0.9772727272727273	+	GGCCUGUUGGUCUAGUGGCAUGAUUCU	38	5	79	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10853559-10853976	Cluster_658	Pocillopora_meandrina_HIv1___Sc0000001	10853559	10853976	418	82	23	0.0	-	GGUCCGUUAGCUCAGUCA	43	75	0	6	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10857028-10857496	Cluster_659	Pocillopora_meandrina_HIv1___Sc0000001	10857028	10857496	469	1119	217	1.0	+	CGCGGGAGACCGGGGUUCGAUUCCCCG	229	41	993	7	20	46	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10862634-10863063	Cluster_660	Pocillopora_meandrina_HIv1___Sc0000001	10862634	10863063	430	4815	142	0.0	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	1667	673	4111	3	4	18	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10871432-10871859	Cluster_661	Pocillopora_meandrina_HIv1___Sc0000001	10871432	10871859	428	176	34	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	67	2	171	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10906237-10906664	Cluster_662	Pocillopora_meandrina_HIv1___Sc0000001	10906237	10906664	428	87	23	0.0	-	UCCUCGGUAGUAUAGCGGUGAGUAUCCC	25	7	79	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10906798-10907226	Cluster_663	Pocillopora_meandrina_HIv1___Sc0000001	10906798	10907226	429	169	72	0.0	-	CGCGGGAGACCGGGGUUCGAUUCCCCG	28	8	156	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10925940-10926355	Cluster_664	Pocillopora_meandrina_HIv1___Sc0000001	10925940	10926355	416	70	18	0.0	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	17	9	61	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11002489-11002913	Cluster_665	Pocillopora_meandrina_HIv1___Sc0000001	11002489	11002913	425	76	36	0.0	-	UUCUCGGUAGUAUAGUGGUGAGUAUCCC	23	5	65	0	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11025769-11026190	Cluster_666	Pocillopora_meandrina_HIv1___Sc0000001	11025769	11026190	422	270	46	1.0	+	UCGACUCCCGGACAGGCCCCCA	93	101	3	25	101	38	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11038843-11039272	Cluster_667	Pocillopora_meandrina_HIv1___Sc0000001	11038843	11039272	430	651	87	0.009216589861751152	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	160	134	501	3	7	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11189265-11189751	Cluster_668	Pocillopora_meandrina_HIv1___Sc0000001	11189265	11189751	487	367	171	0.8065395095367848	+	UUCAAUGGGAAAACGAGAAUAGCGUGAGU	16	10	282	5	3	14	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11198168-11198583	Cluster_669	Pocillopora_meandrina_HIv1___Sc0000001	11198168	11198583	416	87	1	1.0	+	UUCCGAGGUCGCGGUA	87	87	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11270720-11271147	Cluster_670	Pocillopora_meandrina_HIv1___Sc0000001	11270720	11271147	428	356	183	0.8595505617977528	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	29	2	302	1	3	19	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11271469-11272459	Cluster_671	Pocillopora_meandrina_HIv1___Sc0000001	11271469	11272459	991	4133	716	0.9690297604645536	+	UGACUCGUCACUUUGUCUUGCUUAAGCA	661	12	3869	6	29	29	188	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11273323-11274825	Cluster_672	Pocillopora_meandrina_HIv1___Sc0000001	11273323	11274825	1503	11858	940	0.976218586608197	+	UAAGAUUUACACACUGAUCGACCAUGU	5037	42	11641	11	24	65	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11398900-11399349	Cluster_673	Pocillopora_meandrina_HIv1___Sc0000001	11398900	11399349	450	387	113	0.9844961240310077	+	UAAAGUGUAUGUCUUUCUCUGCGAUUUGC	35	3	355	2	2	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11431674-11432547	Cluster_674	Pocillopora_meandrina_HIv1___Sc0000001	11431674	11432547	874	539	261	0.09833024118738404	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	17	3	514	1	0	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11435203-11435632	Cluster_675	Pocillopora_meandrina_HIv1___Sc0000001	11435203	11435632	430	101	23	0.009900990099009901	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	1	98	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11568579-11568995	Cluster_676	Pocillopora_meandrina_HIv1___Sc0000001	11568579	11568995	417	97	50	0.9175257731958762	+	AAGGGUGAAAGGGCUGACGU	8	60	0	24	8	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11620987-11621590	Cluster_677	Pocillopora_meandrina_HIv1___Sc0000001	11620987	11621590	604	787	262	0.6950444726810674	.	UACGCCGAGUAAUUUUGCAUGCUGGACAACC	60	4	692	7	12	25	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11725732-11726171	Cluster_678	Pocillopora_meandrina_HIv1___Sc0000001	11725732	11726171	440	11092	497	0.0005409304002884963	-	UCGACUCCCGGUAUGGGAACCA	4597	875	1829	2632	4827	504	425	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11733487-11733917	Cluster_679	Pocillopora_meandrina_HIv1___Sc0000001	11733487	11733917	431	150	52	0.03333333333333333	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	43	1	145	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11842953-11843395	Cluster_680	Pocillopora_meandrina_HIv1___Sc0000001	11842953	11843395	443	243	115	0.7407407407407407	.	UGCUAAGUUUACUCCUCCGUCUGGGU	16	8	174	7	26	21	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12103184-12104139	Cluster_681	Pocillopora_meandrina_HIv1___Sc0000001	12103184	12104139	956	688	312	0.8837209302325582	+	UGUGUUCAGUGUCACUAGGUCUUUUAC	48	4	663	3	1	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12104175-12104930	Cluster_682	Pocillopora_meandrina_HIv1___Sc0000001	12104175	12104930	756	5346	433	0.9827908716797605	+	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	2892	20	5196	12	35	49	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12266632-12267155	Cluster_683	Pocillopora_meandrina_HIv1___Sc0000001	12266632	12267155	524	1189	302	0.05382674516400336	-	UGAGUAAAUUUUCUUUGAUGGUCGUCGA	173	55	1087	4	8	11	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12269284-12269845	Cluster_684	Pocillopora_meandrina_HIv1___Sc0000001	12269284	12269845	562	473	205	0.052854122621564484	-	UAGGUGUUAUACUGUCUCUUGAUUUGG	47	39	393	4	10	21	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12356153-12357358	Cluster_685	Pocillopora_meandrina_HIv1___Sc0000001	12356153	12357358	1206	2191	718	0.11136467366499316	-	UGAUUACAGUGGCCUUCGAUGCCUGCAGGGC	162	22	2018	22	25	46	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12435335-12435765	Cluster_686	Pocillopora_meandrina_HIv1___Sc0000001	12435335	12435765	431	377	133	0.9575596816976127	+	UUGGGUACUGGUGCACUGG	66	83	264	2	12	13	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12435828-12436321	Cluster_687	Pocillopora_meandrina_HIv1___Sc0000001	12435828	12436321	494	1119	225	0.8579088471849866	+	UAAUGGGAAAACGAGAACAGCGUG	136	10	590	17	16	129	357	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12460760-12461252	Cluster_688	Pocillopora_meandrina_HIv1___Sc0000001	12460760	12461252	493	243	101	0.0411522633744856	-	UGGACAAACAGCAAUAUCACUACAAAGCUU	25	5	222	4	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12562726-12563322	Cluster_689	Pocillopora_meandrina_HIv1___Sc0000001	12562726	12563322	597	5770	491	0.0038128249566724438	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	898	9	5717	5	3	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12578213-12578660	Cluster_690	Pocillopora_meandrina_HIv1___Sc0000001	12578213	12578660	448	373	92	0.5201072386058981	.	UGUCCACCCCCCACCGGCUGUC	61	19	248	20	70	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12716205-12718189	Cluster_691	Pocillopora_meandrina_HIv1___Sc0000001	12716205	12718189	1985	4783	1464	0.2251724858875183	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	263	58	4045	30	28	141	481	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12719606-12720798	Cluster_692	Pocillopora_meandrina_HIv1___Sc0000001	12719606	12720798	1193	3223	868	0.7589202606267452	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	653	33	2909	16	136	50	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12750169-12750597	Cluster_693	Pocillopora_meandrina_HIv1___Sc0000001	12750169	12750597	429	98	20	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	43	0	96	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12754673-12755102	Cluster_694	Pocillopora_meandrina_HIv1___Sc0000001	12754673	12755102	430	325	32	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	145	0	325	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12800573-12801009	Cluster_695	Pocillopora_meandrina_HIv1___Sc0000001	12800573	12801009	437	398	178	0.907035175879397	+	UGAGUUGUCGUGAAGCGUGUGCAGGCA	23	8	369	0	1	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12867780-12868299	Cluster_696	Pocillopora_meandrina_HIv1___Sc0000001	12867780	12868299	520	1970	355	0.21370558375634519	.	UAGGAUAUAUCACUUGCGUAAUUUACAACA	311	81	1750	18	51	22	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12872949-12873376	Cluster_697	Pocillopora_meandrina_HIv1___Sc0000001	12872949	12873376	428	111	39	0.9279279279279279	+	GUGGGAUAGAGCCUUGGAAUUUUGGACC	39	2	109	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12925240-12925665	Cluster_698	Pocillopora_meandrina_HIv1___Sc0000001	12925240	12925665	426	98	21	0.9591836734693877	+	UACCAUAGAACUUUCCGAGACAUUUC	45	0	93	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13141983-13142410	Cluster_699	Pocillopora_meandrina_HIv1___Sc0000001	13141983	13142410	428	97	7	0.9896907216494846	+	UACCAAGGUCUUGUAGUCUAGUACAACU	67	0	96	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13143902-13144326	Cluster_700	Pocillopora_meandrina_HIv1___Sc0000001	13143902	13144326	425	223	120	0.6502242152466368	.	UGCGAAAUGAACUCAGAGCUUUCUG	42	2	202	1	1	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13144672-13145098	Cluster_701	Pocillopora_meandrina_HIv1___Sc0000001	13144672	13145098	427	479	45	0.9979123173277662	+	UGAUUGGUGCAUUUCGAUCCUUGCUGC	370	2	472	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13148777-13149204	Cluster_702	Pocillopora_meandrina_HIv1___Sc0000001	13148777	13149204	428	115	11	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	70	0	113	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13360013-13360440	Cluster_703	Pocillopora_meandrina_HIv1___Sc0000001	13360013	13360440	428	168	55	0.9166666666666666	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	54	2	155	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13536986-13537435	Cluster_704	Pocillopora_meandrina_HIv1___Sc0000001	13536986	13537435	450	445	201	0.02696629213483146	-	UCUUUCGUCUGUUGUCGAUAAAUGAGAGC	30	7	422	3	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13822443-13822984	Cluster_705	Pocillopora_meandrina_HIv1___Sc0000001	13822443	13822984	542	1284	270	0.5482866043613707	.	AAGGAUCAUAUUACUGACAUUUGUAAAU	198	5	1218	8	4	19	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14013921-14014346	Cluster_706	Pocillopora_meandrina_HIv1___Sc0000001	14013921	14014346	426	233	96	0.26180257510729615	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	29	5	208	2	5	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14015157-14015562	Cluster_707	Pocillopora_meandrina_HIv1___Sc0000001	14015157	14015562	406	322	185	0.2515527950310559	.	UGUUCUUUCUCUGCUGUAAUAUAUGGC	16	2	256	6	7	22	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14017598-14018025	Cluster_708	Pocillopora_meandrina_HIv1___Sc0000001	14017598	14018025	428	216	78	0.07407407407407407	-	UAUACACGUUUAGGAUCUUCAUUUUUGA	96	2	207	0	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14502165-14502594	Cluster_709	Pocillopora_meandrina_HIv1___Sc0000001	14502165	14502594	430	343	58	0.014577259475218658	-	GUGCUGCAGAUCUAAGGUUCAAUUAUCUU	113	5	328	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14757192-14757869	Cluster_710	Pocillopora_meandrina_HIv1___Sc0000001	14757192	14757869	678	8282	553	0.003622313450857281	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2263	15	8136	3	57	22	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14758032-14758432	Cluster_711	Pocillopora_meandrina_HIv1___Sc0000001	14758032	14758432	401	385	229	0.2	.	UUUCUUCUGAGGCCUUCUGAGUGUACUC	10	8	308	3	5	25	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14787117-14787543	Cluster_712	Pocillopora_meandrina_HIv1___Sc0000001	14787117	14787543	427	167	59	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	19	3	155	3	0	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14804465-14805185	Cluster_713	Pocillopora_meandrina_HIv1___Sc0000001	14804465	14805185	721	716	140	0.7653631284916201	.	UGAAACUCUGAUCUGAAAACAUUUGUC	131	7	679	9	2	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14844025-14844488	Cluster_714	Pocillopora_meandrina_HIv1___Sc0000001	14844025	14844488	464	3024	130	0.996031746031746	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	1544	0	3018	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14871239-14871877	Cluster_715	Pocillopora_meandrina_HIv1___Sc0000001	14871239	14871877	639	261	117	0.36015325670498083	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	44	1	216	1	3	16	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14937302-14937732	Cluster_716	Pocillopora_meandrina_HIv1___Sc0000001	14937302	14937732	431	2035	171	0.0019656019656019656	-	GCAGCAUCUGUACUACGCCUCGCACUCAGU	978	101	1824	23	59	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15035106-15035533	Cluster_717	Pocillopora_meandrina_HIv1___Sc0000001	15035106	15035533	428	210	71	0.0	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	35	6	198	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15227525-15228110	Cluster_718	Pocillopora_meandrina_HIv1___Sc0000001	15227525	15228110	586	808	246	0.07549504950495049	-	UGGAUUCUAUGACCUGAAUUGAGCA	107	5	777	5	3	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15228296-15228850	Cluster_719	Pocillopora_meandrina_HIv1___Sc0000001	15228296	15228850	555	665	163	0.29172932330827067	.	CGCUAUGUGACAUCCCUGGACAAAGUUCC	146	4	592	11	0	27	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15230069-15230772	Cluster_720	Pocillopora_meandrina_HIv1___Sc0000001	15230069	15230772	704	1074	284	0.8808193668528864	+	UAUAAUGGCACUUUCCUAUCUUCUGGCC	82	4	1009	4	7	14	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15257323-15258019	Cluster_721	Pocillopora_meandrina_HIv1___Sc0000001	15257323	15258019	697	787	257	0.7623888182973316	.	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	103	18	722	4	1	14	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15258356-15258954	Cluster_722	Pocillopora_meandrina_HIv1___Sc0000001	15258356	15258954	599	247	149	0.854251012145749	+	UAGAGACUUUAAGUACUGGAAAUACUUA	15	5	216	7	1	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15302473-15302902	Cluster_723	Pocillopora_meandrina_HIv1___Sc0000001	15302473	15302902	430	200	19	1.0	+	AAAGAAAGAAGUACCUAACUGAACUAGAUG	123	0	199	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15440801-15442329	Cluster_724	Pocillopora_meandrina_HIv1___Sc0000001	15440801	15442329	1529	3880	795	0.956958762886598	+	UGCGCAAUCGUGAUCAAAAAUAUCCUC	258	43	3725	17	15	33	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15491596-15492021	Cluster_725	Pocillopora_meandrina_HIv1___Sc0000001	15491596	15492021	426	203	51	0.009852216748768473	-	UUCCAUCACUGUUCUAGGUAACAUUA	84	1	201	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15572839-15573266	Cluster_726	Pocillopora_meandrina_HIv1___Sc0000001	15572839	15573266	428	128	41	1.0	+	GUGGCGAAAACUCUUGACAAGAUCCUGUCU	32	12	101	5	9	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15682587-15683052	Cluster_727	Pocillopora_meandrina_HIv1___Sc0000001	15682587	15683052	466	460	152	0.8543478260869565	+	UGUGAUCUUAAAGAAUUGACGGGUUUA	58	4	443	3	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15688821-15689251	Cluster_728	Pocillopora_meandrina_HIv1___Sc0000001	15688821	15689251	431	162	64	0.7530864197530864	.	UAAGUUACAUUAACAAUUUUGAGCCUUUUGC	24	3	148	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15704077-15704486	Cluster_729	Pocillopora_meandrina_HIv1___Sc0000001	15704077	15704486	410	195	117	0.4	.	ACUGGAUACAAAACUGCUCGAUGC	32	2	136	2	2	8	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15704561-15705308	Cluster_730	Pocillopora_meandrina_HIv1___Sc0000001	15704561	15705308	748	517	179	0.04061895551257253	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	67	2	501	1	0	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15740066-15740496	Cluster_731	Pocillopora_meandrina_HIv1___Sc0000001	15740066	15740496	431	956	107	0.0020920502092050207	-	AUGAAUCGGAAAAGAAUUACUUAAUGGGU	272	7	935	2	3	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15810876-15811294	Cluster_732	Pocillopora_meandrina_HIv1___Sc0000001	15810876	15811294	419	200	125	0.14	-	AAAGAUCUGUAGAUUGUUGC	16	110	24	30	18	13	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16038032-16038460	Cluster_733	Pocillopora_meandrina_HIv1___Sc0000001	16038032	16038460	429	196	71	0.08673469387755102	-	AUCACACCAGAACUCCAUUUGCUAGAAGG	68	5	174	4	0	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16073283-16073699	Cluster_734	Pocillopora_meandrina_HIv1___Sc0000001	16073283	16073699	417	136	59	0.2647058823529412	.	AUCGCACCAAAACUCCAUAUGCUAGAAGA	25	3	122	0	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16168785-16169202	Cluster_735	Pocillopora_meandrina_HIv1___Sc0000001	16168785	16169202	418	192	68	0.08854166666666667	-	GCUGCGAUGGCCGAGUGG	59	160	21	2	6	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16290834-16291251	Cluster_736	Pocillopora_meandrina_HIv1___Sc0000001	16290834	16291251	418	190	135	1.0	+	UGGGACAAGAUUUGCCUGACAUGUAAAU	6	35	102	11	13	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16350383-16350809	Cluster_737	Pocillopora_meandrina_HIv1___Sc0000001	16350383	16350809	427	89	28	0.033707865168539325	-	AGCUGAAGAAACUUCUAUUGAACAUGU	40	1	81	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17078271-17078693	Cluster_738	Pocillopora_meandrina_HIv1___Sc0000001	17078271	17078693	423	1983	127	0.019162884518406455	-	AAGAACACCCAAAAUAGCUGA	682	186	3	805	520	408	61	21	N	nve-miR-9425
Pocillopora_meandrina_HIv1___Sc0000001:17106031-17106458	Cluster_739	Pocillopora_meandrina_HIv1___Sc0000001	17106031	17106458	428	147	16	0.9931972789115646	+	UUACCAACGUAAUAAAAGUAGAUGACGU	95	1	146	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17293357-17293769	Cluster_740	Pocillopora_meandrina_HIv1___Sc0000001	17293357	17293769	413	107	65	0.0	-	GACGAUGGCAAAAACGUGAACA	11	21	51	8	16	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17567794-17568220	Cluster_741	Pocillopora_meandrina_HIv1___Sc0000001	17567794	17568220	427	184	101	0.016304347826086956	-	AGUACGCAUUGAACUCUAUAGCUGACA	34	35	85	10	16	26	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17658982-17659545	Cluster_742	Pocillopora_meandrina_HIv1___Sc0000001	17658982	17659545	564	1119	218	0.10991957104557641	-	UAUGAUCAAAUACUGGAUUUCCAUCAUGU	290	6	1075	3	3	5	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17698148-17699189	Cluster_743	Pocillopora_meandrina_HIv1___Sc0000001	17698148	17699189	1042	1366	407	0.9956076134699854	+	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	157	14	1342	1	0	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17775013-17775434	Cluster_744	Pocillopora_meandrina_HIv1___Sc0000001	17775013	17775434	422	94	18	1.0	+	UUUCAUGGAUUGAGUGCUACUC	53	6	0	14	68	3	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17940877-17941425	Cluster_745	Pocillopora_meandrina_HIv1___Sc0000001	17940877	17941425	549	226	47	0.995575221238938	+	CCUGUGAAUACUUCUGGCAUUACUCAAGCC	75	0	204	4	3	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17949925-17950374	Cluster_746	Pocillopora_meandrina_HIv1___Sc0000001	17949925	17950374	450	335	103	0.9850746268656716	+	UGUAACAUCGUGUGACUUGAACGCUCUUUGC	58	1	317	4	3	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17956254-17956682	Cluster_747	Pocillopora_meandrina_HIv1___Sc0000001	17956254	17956682	429	157	69	0.07643312101910828	-	UAGGAAAAUUGAUCUGCUGAGCUAUUUGC	21	9	134	1	3	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17982143-17982566	Cluster_748	Pocillopora_meandrina_HIv1___Sc0000001	17982143	17982566	424	91	34	1.0	+	UCUCAACUUACCAAAAACUCUACC	22	0	56	0	1	4	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18120359-18120786	Cluster_749	Pocillopora_meandrina_HIv1___Sc0000001	18120359	18120786	428	85	9	0.023529411764705882	-	UACCAAGGUCUUGUAGUCUAGUACAACU	52	0	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18480082-18480504	Cluster_750	Pocillopora_meandrina_HIv1___Sc0000001	18480082	18480504	423	296	72	0.02027027027027027	-	ACUAAUUUUUCGUAGCCCUGCCU	35	150	11	31	32	52	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18622873-18623298	Cluster_751	Pocillopora_meandrina_HIv1___Sc0000001	18622873	18623298	426	155	98	0.12903225806451613	-	GUAGUUGAUAGAACUUUACAGGCAGACGU	21	30	87	11	4	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18706029-18706447	Cluster_752	Pocillopora_meandrina_HIv1___Sc0000001	18706029	18706447	419	72	25	1.0	+	UGAAGUCAGGACUGGGAUAAGAGGG	16	13	53	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19145766-19145858	Cluster_753	Pocillopora_meandrina_HIv1___Sc0000001	19145766	19145858	93	6321	255	1.0	+	CGCUCUUAAAAUCUCCUAGCUAU	1605	1315	82	585	1212	2501	626	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000001:19235018-19235447	Cluster_754	Pocillopora_meandrina_HIv1___Sc0000001	19235018	19235447	430	354	35	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	189	0	353	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19237350-19237983	Cluster_755	Pocillopora_meandrina_HIv1___Sc0000001	19237350	19237983	634	3082	363	0.8059701492537313	+	UGUUUCACACUUUACUACAUUCCCUGGU	834	57	2548	12	20	408	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19240553-19240972	Cluster_756	Pocillopora_meandrina_HIv1___Sc0000001	19240553	19240972	420	102	45	0.08823529411764706	-	UCCAUAAGAUCUUUGACAGCUAAAAAGCGG	14	3	97	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19318656-19319210	Cluster_757	Pocillopora_meandrina_HIv1___Sc0000001	19318656	19319210	555	404	118	0.38366336633663367	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	65	0	375	6	2	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19329318-19329746	Cluster_758	Pocillopora_meandrina_HIv1___Sc0000001	19329318	19329746	429	99	30	0.9292929292929293	+	UACAAACAACAGAAUGUUCGAACGGCUCGAC	26	2	92	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19460429-19460910	Cluster_759	Pocillopora_meandrina_HIv1___Sc0000001	19460429	19460910	482	32474	598	0.9999384122682762	+	GGGGGACUAGCUCAGAUGGU	9903	23936	4803	1621	832	1112	170	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19495962-19496440	Cluster_760	Pocillopora_meandrina_HIv1___Sc0000001	19495962	19496440	479	791	262	0.2503160556257901	.	UGGACUUCGGCUCUAAAGGA	146	648	21	70	33	15	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19538058-19538488	Cluster_761	Pocillopora_meandrina_HIv1___Sc0000001	19538058	19538488	431	339	57	0.9970501474926253	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	165	2	335	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19618795-19619966	Cluster_762	Pocillopora_meandrina_HIv1___Sc0000001	19618795	19619966	1172	1843	594	0.9614758545849159	+	UGUGUCUUUCUCUUAGUGCUGUAAGGU	232	19	1746	6	9	16	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19620002-19620462	Cluster_763	Pocillopora_meandrina_HIv1___Sc0000001	19620002	19620462	461	292	187	0.9143835616438356	+	UAAUGACUUUGGCCUCAACUUCUGAUG	10	5	269	1	4	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19620561-19621069	Cluster_764	Pocillopora_meandrina_HIv1___Sc0000001	19620561	19621069	509	653	235	0.9509954058192955	+	UGAUAACUUGCUAUCGAUCGCGGUACU	80	8	625	2	5	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19621503-19622206	Cluster_765	Pocillopora_meandrina_HIv1___Sc0000001	19621503	19622206	704	976	380	0.8442622950819673	+	UGUUCCUUGAAUUCUGCGUGCACAAAGC	207	17	861	11	17	31	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19622523-19623533	Cluster_766	Pocillopora_meandrina_HIv1___Sc0000001	19622523	19623533	1011	2724	795	0.802496328928047	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	235	20	2253	11	29	100	311	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19640322-19642590	Cluster_767	Pocillopora_meandrina_HIv1___Sc0000001	19640322	19642590	2269	3263	1202	0.9399325773827766	+	UGUGUCUUUCUCUUAGUGCUGUAAGGU	235	39	3062	21	18	42	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19643027-19644113	Cluster_768	Pocillopora_meandrina_HIv1___Sc0000001	19643027	19644113	1087	2620	831	0.8935114503816793	+	UGUUCCUUGAAUUCUGCGUGCACAAAGC	208	49	2373	26	30	66	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19644177-19645055	Cluster_769	Pocillopora_meandrina_HIv1___Sc0000001	19644177	19645055	879	1735	454	0.8472622478386167	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	244	5	1504	13	13	47	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19992950-19993378	Cluster_770	Pocillopora_meandrina_HIv1___Sc0000001	19992950	19993378	429	459	116	0.13071895424836602	-	UGGUUACUGAGGAAGAAAAGAAGU	89	11	265	30	6	14	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19995371-19996074	Cluster_771	Pocillopora_meandrina_HIv1___Sc0000001	19995371	19996074	704	1083	270	0.29547553093259465	.	UUAAGCAUUAUCGAAGGUAACCAGACUG	110	6	924	3	5	53	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20128710-20129245	Cluster_772	Pocillopora_meandrina_HIv1___Sc0000001	20128710	20129245	536	1482	346	0.0	-	AGGGAAGUGUAGCUCAAUUACAUGAGAGUU	166	269	990	60	47	56	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20129986-20130409	Cluster_773	Pocillopora_meandrina_HIv1___Sc0000001	20129986	20130409	424	473	85	0.0	-	AAAACAUGGCUGAUGAGGA	65	348	50	38	18	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20270769-20271189	Cluster_774	Pocillopora_meandrina_HIv1___Sc0000001	20270769	20271189	421	272	112	0.5992647058823529	.	UGUGUCCAAACGUCGGCUUUG	74	119	2	127	22	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20271285-20271710	Cluster_775	Pocillopora_meandrina_HIv1___Sc0000001	20271285	20271710	426	354	195	0.7259887005649718	.	UUUGGACACAUGUGCUGCGAG	35	174	11	132	26	10	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20331429-20331833	Cluster_776	Pocillopora_meandrina_HIv1___Sc0000001	20331429	20331833	405	109	74	0.0	-	AAGAUGAAGACUCUGUUCACAAGCU	5	26	56	7	10	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20348288-20348707	Cluster_777	Pocillopora_meandrina_HIv1___Sc0000001	20348288	20348707	420	217	141	1.0	+	AGUGGCUGAUCUCAGUGAAAUU	13	38	96	23	23	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20349257-20349659	Cluster_778	Pocillopora_meandrina_HIv1___Sc0000001	20349257	20349659	403	216	156	1.0	+	UUUUCUCUGAUAAUGUUGCUGUA	5	48	96	16	21	17	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20350380-20350797	Cluster_779	Pocillopora_meandrina_HIv1___Sc0000001	20350380	20350797	418	287	192	0.9930313588850174	+	AAAAGUAGUUUGAUUGUUCGGC	8	75	114	24	28	26	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20351611-20352019	Cluster_780	Pocillopora_meandrina_HIv1___Sc0000001	20351611	20352019	409	166	105	0.9939759036144579	+	AUUGCUGUGCCUUUGUAGA	14	69	37	14	26	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20354485-20354907	Cluster_781	Pocillopora_meandrina_HIv1___Sc0000001	20354485	20354907	423	313	184	1.0	+	GACGGUCUGUAUUUUCACUGCA	15	49	127	32	40	37	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20455816-20456244	Cluster_782	Pocillopora_meandrina_HIv1___Sc0000001	20455816	20456244	429	253	41	0.0	-	CCCGAGUUGUCUCCUGUCCGAGGUUCAGU	120	10	237	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20499336-20499904	Cluster_783	Pocillopora_meandrina_HIv1___Sc0000001	20499336	20499904	569	1204	339	0.0681063122923588	-	UCUUCCGGUCUGUUUUCGCUUUUUCUGGA	128	22	1112	8	8	28	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20501232-20502218	Cluster_784	Pocillopora_meandrina_HIv1___Sc0000001	20501232	20502218	987	1922	499	0.012486992715920915	-	UGCUGUAGUUUUUACUUCCGACUGAACAUU	165	5	1889	2	4	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20642790-20643214	Cluster_785	Pocillopora_meandrina_HIv1___Sc0000001	20642790	20643214	425	166	49	0.8975903614457831	+	AUUGGUGAAAGAGUAAGAUUCUGGC	63	3	119	2	9	2	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20646624-20647052	Cluster_786	Pocillopora_meandrina_HIv1___Sc0000001	20646624	20647052	429	228	35	0.2412280701754386	.	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	87	0	226	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20647428-20647855	Cluster_787	Pocillopora_meandrina_HIv1___Sc0000001	20647428	20647855	428	260	23	0.08846153846153847	-	UAGUUUGAAAAGAUAUCGCUCAGUG	134	3	240	6	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20971110-20971537	Cluster_788	Pocillopora_meandrina_HIv1___Sc0000001	20971110	20971537	428	230	99	0.9695652173913043	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	72	2	224	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20971932-20972341	Cluster_789	Pocillopora_meandrina_HIv1___Sc0000001	20971932	20972341	410	187	108	0.6096256684491979	.	ACUGGAUACAAAACUGCUCGAUGC	22	2	135	0	2	5	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20982665-20983085	Cluster_790	Pocillopora_meandrina_HIv1___Sc0000001	20982665	20983085	421	71	5	0.971830985915493	+	UCUGACGAAGGGCUGACACUU	67	0	1	69	1	0	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21215812-21216293	Cluster_791	Pocillopora_meandrina_HIv1___Sc0000001	21215812	21216293	482	2974	489	0.0	-	CAGCGAUGAUGAAGACUUAGAGUUUUGCU	172	1144	658	288	163	429	292	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21278193-21278618	Cluster_792	Pocillopora_meandrina_HIv1___Sc0000001	21278193	21278618	426	433	107	0.0	-	AUGGUCUUGUGAAUUUUUGCUGGAUA	94	41	178	96	46	22	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21278917-21279466	Cluster_793	Pocillopora_meandrina_HIv1___Sc0000001	21278917	21279466	550	659	273	0.0	-	CUCUGAAUCAGACUUUCAAACAUCA	32	89	356	24	92	56	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21443208-21443619	Cluster_794	Pocillopora_meandrina_HIv1___Sc0000001	21443208	21443619	412	191	155	0.015706806282722512	-	GAUGGAAGCCUUUUAACGAUA	3	42	87	17	20	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21443789-21444189	Cluster_795	Pocillopora_meandrina_HIv1___Sc0000001	21443789	21444189	401	246	184	0.0040650406504065045	-	UCUUGAACGACUGAAGGACGUGUGCCAAC	5	53	115	27	22	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21448381-21448799	Cluster_796	Pocillopora_meandrina_HIv1___Sc0000001	21448381	21448799	419	423	294	0.0	-	CGUGGACUGUCUACGUGAUCUGGACAAGA	8	102	185	40	48	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:43675-44102	Cluster_797	Pocillopora_meandrina_HIv1___Sc0000002	43675	44102	428	356	121	0.9466292134831461	+	UCUGUCUCCUCUGUAAUAAUGACACUGA	76	3	341	2	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:66073-66501	Cluster_798	Pocillopora_meandrina_HIv1___Sc0000002	66073	66501	429	295	22	0.01694915254237288	-	CGUGUUUGGAUUACGAUCACCUGAAGCGC	193	1	287	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:217180-217606	Cluster_799	Pocillopora_meandrina_HIv1___Sc0000002	217180	217606	427	111	39	0.918918918918919	+	UAGGAUAUAUGACUUGCGUAAUUUACAACA	17	5	96	0	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:242838-243539	Cluster_800	Pocillopora_meandrina_HIv1___Sc0000002	242838	243539	702	256	135	0.9453125	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	27	0	243	1	3	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:244766-245197	Cluster_801	Pocillopora_meandrina_HIv1___Sc0000002	244766	245197	432	241	139	0.8464730290456431	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	22	2	215	0	0	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:313284-313712	Cluster_802	Pocillopora_meandrina_HIv1___Sc0000002	313284	313712	429	2295	95	0.010021786492374727	-	UAACUUCAACUAGAUCGAAAUGCUUGUGA	1609	10	2275	5	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:340857-341277	Cluster_803	Pocillopora_meandrina_HIv1___Sc0000002	340857	341277	421	436	297	1.0	+	GCCGAAGAAGAAGAGGACU	10	111	162	51	37	36	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:564384-564854	Cluster_804	Pocillopora_meandrina_HIv1___Sc0000002	564384	564854	471	1439	230	0.7428769979152189	.	UAGGAUAUAUCACUUGCGUAAUUUACA	278	32	1331	9	25	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:568138-569331	Cluster_805	Pocillopora_meandrina_HIv1___Sc0000002	568138	569331	1194	1415	551	0.11024734982332156	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	134	17	1311	5	7	27	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:569419-570207	Cluster_806	Pocillopora_meandrina_HIv1___Sc0000002	569419	570207	789	601	345	0.0632279534109817	-	UCCGUUUCGCUUGACUACUGGGACAAUUG	18	3	571	2	3	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:570310-571232	Cluster_807	Pocillopora_meandrina_HIv1___Sc0000002	570310	571232	923	649	277	0.05084745762711865	-	UGGUUGUACUCUUAUACUCAAUGAUAUA	84	5	607	2	2	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:621854-623333	Cluster_808	Pocillopora_meandrina_HIv1___Sc0000002	621854	623333	1480	1031	492	0.8777885548011639	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	55	16	868	7	14	14	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:626450-626878	Cluster_809	Pocillopora_meandrina_HIv1___Sc0000002	626450	626878	429	248	28	1.0	+	UCUGAUGACACUUUGGACUUGGGACUU	104	0	244	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:633881-634813	Cluster_810	Pocillopora_meandrina_HIv1___Sc0000002	633881	634813	933	528	319	0.9034090909090909	+	UCAGACACGUGGAUACUUGCGAUGAAGU	16	1	496	2	4	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:635164-635593	Cluster_811	Pocillopora_meandrina_HIv1___Sc0000002	635164	635593	430	228	103	0.9342105263157895	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	17	1	215	1	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:636324-636752	Cluster_812	Pocillopora_meandrina_HIv1___Sc0000002	636324	636752	429	213	66	0.7323943661971831	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	42	0	172	1	1	5	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:645285-645712	Cluster_813	Pocillopora_meandrina_HIv1___Sc0000002	645285	645712	428	240	31	1.0	+	UGGCUCAACCAACUGAAGUGAAAUAUUC	188	0	236	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:651110-651536	Cluster_814	Pocillopora_meandrina_HIv1___Sc0000002	651110	651536	427	185	85	0.9297297297297298	+	UCUGUAGUAAACUGGCUGAUAUUUUC	31	1	176	0	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:663356-663783	Cluster_815	Pocillopora_meandrina_HIv1___Sc0000002	663356	663783	428	123	44	1.0	+	UUAUUUGAGAUUUGGGAUAAUGUGUGUUGU	22	0	121	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:675552-675980	Cluster_816	Pocillopora_meandrina_HIv1___Sc0000002	675552	675980	429	190	64	0.13157894736842105	-	UGUUGCUUUACGGAUUUUGAGUUACCUUC	41	1	160	2	1	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:681759-682166	Cluster_817	Pocillopora_meandrina_HIv1___Sc0000002	681759	682166	408	144	95	0.0763888888888889	-	UAAGAUCGUCAUGGCAUCCAAAACAGA	10	1	131	0	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:840307-840736	Cluster_818	Pocillopora_meandrina_HIv1___Sc0000002	840307	840736	430	234	132	0.20512820512820512	.	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	21	1	215	1	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:841966-842667	Cluster_819	Pocillopora_meandrina_HIv1___Sc0000002	841966	842667	702	272	136	0.0625	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	33	4	266	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:961248-961779	Cluster_820	Pocillopora_meandrina_HIv1___Sc0000002	961248	961779	532	366	167	1.0	+	AAGCUGAGUUUCCAAUGCCUGGCAUGG	42	63	224	15	14	24	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:987966-988384	Cluster_821	Pocillopora_meandrina_HIv1___Sc0000002	987966	988384	419	101	5	1.0	+	GUGCUGGGUAACUUUGGUG	51	100	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1019618-1020044	Cluster_822	Pocillopora_meandrina_HIv1___Sc0000002	1019618	1020044	427	138	48	0.043478260869565216	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	37	1	136	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1170901-1171329	Cluster_823	Pocillopora_meandrina_HIv1___Sc0000002	1170901	1171329	429	303	58	0.8217821782178217	+	CAGUACCUAAAUCUACAAAGCUUGACCGC	133	8	291	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1393700-1394127	Cluster_824	Pocillopora_meandrina_HIv1___Sc0000002	1393700	1394127	428	143	62	0.7062937062937062	.	CCUGGUCUUAAAUUCAUACGUUGUGAUA	29	4	111	4	2	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1394760-1395832	Cluster_825	Pocillopora_meandrina_HIv1___Sc0000002	1394760	1395832	1073	988	473	0.2054655870445344	.	UGAUUCAUCAGUAUUAAUGACUGUAGU	58	19	890	7	9	28	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1451342-1453080	Cluster_826	Pocillopora_meandrina_HIv1___Sc0000002	1451342	1453080	1739	2822	1077	0.9578313253012049	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	93	16	2675	8	26	48	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1457990-1458924	Cluster_827	Pocillopora_meandrina_HIv1___Sc0000002	1457990	1458924	935	987	352	0.037487335359675786	-	UAAUGACUUCAGAGUAGACAGAGACGGU	74	8	953	7	4	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1470195-1470624	Cluster_828	Pocillopora_meandrina_HIv1___Sc0000002	1470195	1470624	430	504	64	0.07341269841269842	-	UUAACUCCACGGUGCCAAUGACUUUCUU	143	0	482	1	3	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1576491-1576920	Cluster_829	Pocillopora_meandrina_HIv1___Sc0000002	1576491	1576920	430	319	72	0.9937304075235109	+	UAUUUGGAAAAGUGGUUCCCAAGACUGUG	78	16	296	3	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1603251-1603680	Cluster_830	Pocillopora_meandrina_HIv1___Sc0000002	1603251	1603680	430	177	67	0.9209039548022598	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	27	1	167	0	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1603755-1604298	Cluster_831	Pocillopora_meandrina_HIv1___Sc0000002	1603755	1604298	544	443	198	0.891647855530474	+	UGUAUCUUCUUAGGCCAGCAUGUGUACUGA	47	5	421	0	1	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1604450-1604878	Cluster_832	Pocillopora_meandrina_HIv1___Sc0000002	1604450	1604878	429	227	92	0.9647577092511013	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	57	0	222	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1605183-1605789	Cluster_833	Pocillopora_meandrina_HIv1___Sc0000002	1605183	1605789	607	399	167	0.949874686716792	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	44	2	383	1	0	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1730182-1730612	Cluster_834	Pocillopora_meandrina_HIv1___Sc0000002	1730182	1730612	431	389	84	0.9511568123393316	+	UAGGUAAAGUCUUUCUGUUGACAGAGUU	126	4	372	2	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1795902-1796330	Cluster_835	Pocillopora_meandrina_HIv1___Sc0000002	1795902	1796330	429	188	41	0.6276595744680851	.	AUGACGAAUAUGUUUACACGGUAGGCGGU	69	1	174	4	7	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1796433-1796862	Cluster_836	Pocillopora_meandrina_HIv1___Sc0000002	1796433	1796862	430	407	101	0.972972972972973	+	AGCGAUUAGAAGAGCUAGACAUCAUCGAGA	134	6	324	3	6	28	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1991286-1992117	Cluster_837	Pocillopora_meandrina_HIv1___Sc0000002	1991286	1992117	832	527	218	0.9620493358633776	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	52	0	513	1	3	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1993634-1994064	Cluster_838	Pocillopora_meandrina_HIv1___Sc0000002	1993634	1994064	431	260	127	0.2153846153846154	.	UCUGAUCCGACGAAUAUUAUAAAUGUAGUA	13	1	242	1	0	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2177166-2177595	Cluster_839	Pocillopora_meandrina_HIv1___Sc0000002	2177166	2177595	430	3382	109	1.0	+	UUCUCUCGAACAUUUUACUAUUUAGGUA	1932	14	3281	2	7	67	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2251895-2252813	Cluster_840	Pocillopora_meandrina_HIv1___Sc0000002	2251895	2252813	919	909	313	0.22442244224422442	.	UUCAACGUGUGUAGGACCUUUUUCAGCC	53	5	827	11	9	23	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2253914-2254342	Cluster_841	Pocillopora_meandrina_HIv1___Sc0000002	2253914	2254342	429	158	19	0.0	-	UUCGACUGCUGUGUCCAUCUCGACUGAAG	23	0	158	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2273799-2274208	Cluster_842	Pocillopora_meandrina_HIv1___Sc0000002	2273799	2274208	410	130	59	0.9384615384615385	+	UACUCGAGGAGUUUUGACUGAACGCGCG	43	0	123	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2307761-2308182	Cluster_843	Pocillopora_meandrina_HIv1___Sc0000002	2307761	2308182	422	262	149	0.35877862595419846	.	UUGCAAUUGAGCUCUCCCCUGAAG	11	1	228	1	3	5	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2308601-2309650	Cluster_844	Pocillopora_meandrina_HIv1___Sc0000002	2308601	2309650	1050	883	255	0.3159682899207248	.	UGAUACAAUUCUGGCGCUGAGCAAAUGCC	63	6	750	4	3	45	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2310173-2310599	Cluster_845	Pocillopora_meandrina_HIv1___Sc0000002	2310173	2310599	427	199	73	0.5678391959798995	.	AAUGGUAUUAAGCAUCGACGUGUA	18	0	164	0	1	14	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2310751-2311179	Cluster_846	Pocillopora_meandrina_HIv1___Sc0000002	2310751	2311179	429	202	34	0.09405940594059406	-	UUCGACUGCUGUGUCCAUCUCGACUGAAGC	28	0	197	0	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2471144-2471658	Cluster_847	Pocillopora_meandrina_HIv1___Sc0000002	2471144	2471658	515	309	218	0.009708737864077669	-	UUGACAGGAUAUGUGCACUAGCUUAUACU	7	51	192	9	20	13	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2472280-2473102	Cluster_848	Pocillopora_meandrina_HIv1___Sc0000002	2472280	2473102	823	718	502	0.001392757660167131	-	CUGAUGAAGCUGUAGCUUAUGGUGCA	14	152	329	53	44	65	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2474111-2474556	Cluster_849	Pocillopora_meandrina_HIv1___Sc0000002	2474111	2474556	446	375	134	0.0026666666666666666	-	GUCUGUCAGAUCGGACCAGAAACACUGGCC	94	31	271	5	17	38	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2630920-2631380	Cluster_850	Pocillopora_meandrina_HIv1___Sc0000002	2630920	2631380	461	776	173	0.9188144329896907	+	UUGUUGAUUUUCUCUUGAAGAGUUUGGA	113	25	722	6	1	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2853315-2853747	Cluster_851	Pocillopora_meandrina_HIv1___Sc0000002	2853315	2853747	433	471	72	0.9851380042462845	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	107	3	465	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2853977-2854400	Cluster_852	Pocillopora_meandrina_HIv1___Sc0000002	2853977	2854400	424	120	49	0.041666666666666664	-	ACUGGUACAAACAAAGGUCGAGUGGCCAUU	12	3	82	1	1	3	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2872429-2872859	Cluster_853	Pocillopora_meandrina_HIv1___Sc0000002	2872429	2872859	431	154	62	0.935064935064935	+	UGUUUACUUUCUUUACAACUUCGGAUACGUG	36	0	147	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3173969-3174386	Cluster_854	Pocillopora_meandrina_HIv1___Sc0000002	3173969	3174386	418	297	202	1.0	+	GACGGAAAGGGAUUCUUGAUCA	7	79	125	24	26	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3174981-3175406	Cluster_855	Pocillopora_meandrina_HIv1___Sc0000002	3174981	3175406	426	218	158	1.0	+	GACCGUGCACUUCUAGAACUGCAGCU	7	44	105	12	23	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3175713-3176133	Cluster_856	Pocillopora_meandrina_HIv1___Sc0000002	3175713	3176133	421	187	128	1.0	+	AAAGAUAAAAAGUGGAACAAGACU	10	34	87	9	19	10	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3179266-3179683	Cluster_857	Pocillopora_meandrina_HIv1___Sc0000002	3179266	3179683	418	211	162	0.995260663507109	+	UUUGGAAAUCUGUUUGAA	5	48	85	20	15	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3313497-3314695	Cluster_858	Pocillopora_meandrina_HIv1___Sc0000002	3313497	3314695	1199	1309	518	0.04965622612681436	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	118	16	1212	4	9	28	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3314784-3315633	Cluster_859	Pocillopora_meandrina_HIv1___Sc0000002	3314784	3315633	850	1645	500	0.06139817629179331	-	UGUGUGUAUUAAUCGUAAGGAGUUCCUU	94	7	1577	5	5	12	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3315686-3317190	Cluster_860	Pocillopora_meandrina_HIv1___Sc0000002	3315686	3317190	1505	2202	590	0.03814713896457766	-	UGAAGAAGUUGACUUGACUGGAACCACU	138	6	2121	9	7	23	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3354798-3355223	Cluster_861	Pocillopora_meandrina_HIv1___Sc0000002	3354798	3355223	426	218	151	0.26146788990825687	.	UAUUUGUCUGAUGUUCGUCCUCCCCA	6	9	184	6	1	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3374185-3374726	Cluster_862	Pocillopora_meandrina_HIv1___Sc0000002	3374185	3374726	542	988	305	1.0	+	AGUGGAAGAGAACUUUGCAACAUUU	208	158	559	42	133	29	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3394607-3395035	Cluster_863	Pocillopora_meandrina_HIv1___Sc0000002	3394607	3395035	429	163	45	0.852760736196319	+	AAUGGGAAAACGAGAACAGCGUGAGUGUU	63	3	142	0	1	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3452992-3453420	Cluster_864	Pocillopora_meandrina_HIv1___Sc0000002	3452992	3453420	429	81	25	0.9876543209876543	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	27	0	80	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3594324-3594932	Cluster_865	Pocillopora_meandrina_HIv1___Sc0000002	3594324	3594932	609	1327	229	0.9133383571966842	+	UACUGUCUAUCCUAACUGCGCUUCGC	176	10	1249	10	12	24	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3595018-3595453	Cluster_866	Pocillopora_meandrina_HIv1___Sc0000002	3595018	3595453	436	272	51	0.7095588235294118	.	UUACAGAAAUUAAUGCGGGAAACAGUACU	148	9	253	1	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3633498-3633928	Cluster_867	Pocillopora_meandrina_HIv1___Sc0000002	3633498	3633928	431	149	40	1.0	+	UUCUGGCUAGCAAUUACUUCUGAAGAAGGUU	55	2	146	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3634440-3635614	Cluster_868	Pocillopora_meandrina_HIv1___Sc0000002	3634440	3635614	1175	1476	417	0.986449864498645	+	UAUUCUAAUUCGGUGGUUUGACAUUCCAUU	114	8	1419	8	8	14	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3645599-3646028	Cluster_869	Pocillopora_meandrina_HIv1___Sc0000002	3645599	3646028	430	293	86	1.0	+	AUCAGUCUGAAUGAUCGUGAAAGGGGUUGG	78	2	278	1	0	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3650871-3651300	Cluster_870	Pocillopora_meandrina_HIv1___Sc0000002	3650871	3651300	430	4465	221	0.9993281075027995	+	AACCACUGUAGUAAUUGACUGUUACCU	1522	41	4415	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3651393-3652409	Cluster_871	Pocillopora_meandrina_HIv1___Sc0000002	3651393	3652409	1017	816	277	0.9975490196078431	+	UCUAUUCUGGAUAGCUUGCGAUUACUGUU	70	3	799	0	4	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3653308-3653801	Cluster_872	Pocillopora_meandrina_HIv1___Sc0000002	3653308	3653801	494	940	194	0.9989361702127659	+	UACAAAACCAGUAGAAAUGCAGAAAAAACAG	149	45	850	11	5	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3653807-3656139	Cluster_873	Pocillopora_meandrina_HIv1___Sc0000002	3653807	3656139	2333	13987	2528	0.9796239365124759	+	UCUUCCUUUUAUCUCCUGUCCUUUUUAGA	587	710	12602	77	163	211	224	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3656956-3657999	Cluster_874	Pocillopora_meandrina_HIv1___Sc0000002	3656956	3657999	1044	30802	1762	0.9975650931757678	+	UUGUCUGGAUUGUACACUUUGAAGUGCA	2206	63	30394	64	75	76	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3658170-3658570	Cluster_875	Pocillopora_meandrina_HIv1___Sc0000002	3658170	3658570	401	169	94	1.0	+	UGAAAUAGACUCACAUUCAUCAAGAUGACU	18	3	161	3	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3659265-3659693	Cluster_876	Pocillopora_meandrina_HIv1___Sc0000002	3659265	3659693	429	299	115	1.0	+	UCUUCCCAUCGUCUUCCAAAAUUUGAGGA	28	2	290	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3660444-3660896	Cluster_877	Pocillopora_meandrina_HIv1___Sc0000002	3660444	3660896	453	1495	209	1.0	+	UACUUCUUGACUGCCUUCAUACUUGUGGC	437	10	1470	2	4	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3666072-3667756	Cluster_878	Pocillopora_meandrina_HIv1___Sc0000002	3666072	3667756	1685	2139	834	0.18887330528284246	-	UCUAACGCGUUUGUCUGACAUCCCUUU	150	38	1901	23	43	43	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3668754-3670593	Cluster_879	Pocillopora_meandrina_HIv1___Sc0000002	3668754	3670593	1840	18326	2676	0.9007966823092873	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3196	304	16185	201	105	213	1318	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3674659-3675089	Cluster_880	Pocillopora_meandrina_HIv1___Sc0000002	3674659	3675089	431	184	67	1.0	+	UGUUUUACUCCUGAAGAGCCAACUGGACGGG	32	3	176	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3675642-3676070	Cluster_881	Pocillopora_meandrina_HIv1___Sc0000002	3675642	3676070	429	197	43	1.0	+	UAAAGAAGAGAAAUGCUAAAGGAUUCAGC	78	0	197	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3676129-3676585	Cluster_882	Pocillopora_meandrina_HIv1___Sc0000002	3676129	3676585	457	11888	97	0.9999158815612382	+	UGAUCUUCUUGAAUUUGUCAUUUACAAUA	4993	5	11853	0	7	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3676790-3677257	Cluster_883	Pocillopora_meandrina_HIv1___Sc0000002	3676790	3677257	468	2198	181	1.0	+	UUCCAUUUCACCAAAUAUUGAACCUGAAGG	493	1	2195	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3678079-3678480	Cluster_884	Pocillopora_meandrina_HIv1___Sc0000002	3678079	3678480	402	159	75	1.0	+	UGAAGUCAUCUGUUUCCAGGGAGCUGGC	36	2	156	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3678825-3679253	Cluster_885	Pocillopora_meandrina_HIv1___Sc0000002	3678825	3679253	429	257	157	1.0	+	UGUUUGUAUCUUCUUUCUUCUUUCUUGA	9	0	250	3	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3679595-3680568	Cluster_886	Pocillopora_meandrina_HIv1___Sc0000002	3679595	3680568	974	855	337	1.0	+	UAAUACCAAACAUGUCUGACUCUAUGCGUC	98	8	820	3	3	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3680865-3682503	Cluster_887	Pocillopora_meandrina_HIv1___Sc0000002	3680865	3682503	1639	3210	846	0.9940809968847352	+	UAUCACUUCUACAUGGACAGAACUUUUGGGA	260	16	3118	11	16	19	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3682594-3683420	Cluster_888	Pocillopora_meandrina_HIv1___Sc0000002	3682594	3683420	827	347	163	1.0	+	UGAUCUGUCUUACUUCUAUCAACGUUGAUA	24	1	335	1	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3684709-3685123	Cluster_889	Pocillopora_meandrina_HIv1___Sc0000002	3684709	3685123	415	230	120	1.0	+	UUGGUCACUGUCUUUGCGCUAAGUUCACAUU	11	3	215	1	4	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3688785-3689584	Cluster_890	Pocillopora_meandrina_HIv1___Sc0000002	3688785	3689584	800	745	307	0.9865771812080537	+	UAAGUGCCAAAGACUGUUUCAGAACUUC	33	14	698	5	8	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3690290-3691344	Cluster_891	Pocillopora_meandrina_HIv1___Sc0000002	3690290	3691344	1055	515	179	0.9980582524271845	+	UUGGAUGUACCAAAUUUCUUGAGACUGGCA	66	5	501	0	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3694540-3695954	Cluster_892	Pocillopora_meandrina_HIv1___Sc0000002	3694540	3695954	1415	7513	1155	0.9994675895115134	+	UGAUCCUUUUCAUCUGGCAUGUGGACGUG	539	50	7268	16	45	83	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3700620-3701260	Cluster_893	Pocillopora_meandrina_HIv1___Sc0000002	3700620	3701260	641	462	169	1.0	+	UGGGAUCAAAGUACUUUAAUACAGGAGAUU	41	3	451	2	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3701325-3701742	Cluster_894	Pocillopora_meandrina_HIv1___Sc0000002	3701325	3701742	418	123	57	1.0	+	UGAAACUCUUCUGGCGCAGGUGAAAUACC	21	4	109	5	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3703878-3704313	Cluster_895	Pocillopora_meandrina_HIv1___Sc0000002	3703878	3704313	436	359	93	1.0	+	UUGACUGCCUCUGUACCUGUGAGAAAUAAC	119	1	349	7	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3705341-3706092	Cluster_896	Pocillopora_meandrina_HIv1___Sc0000002	3705341	3706092	752	805	274	0.9813664596273292	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	70	0	788	3	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3706375-3707908	Cluster_897	Pocillopora_meandrina_HIv1___Sc0000002	3706375	3707908	1534	5375	1100	0.9560930232558139	+	UGUUACUUUCAGUGGCUGUUCGAGGGGC	1180	29	5017	16	76	76	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3707943-3710875	Cluster_898	Pocillopora_meandrina_HIv1___Sc0000002	3707943	3710875	2933	10965	2255	0.9806657546739626	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1258	44	10649	22	29	58	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3712605-3713228	Cluster_899	Pocillopora_meandrina_HIv1___Sc0000002	3712605	3713228	624	398	120	0.992462311557789	+	UUCUAUGGUAUGCAUGUCAGCAUGACUGU	45	3	380	4	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3715928-3716824	Cluster_900	Pocillopora_meandrina_HIv1___Sc0000002	3715928	3716824	897	9756	914	0.9586920869208692	+	UAUUGAACUUGGAGCAAACCUUGCCUAAA	1266	64	9251	47	117	101	176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3718063-3719283	Cluster_901	Pocillopora_meandrina_HIv1___Sc0000002	3718063	3719283	1221	1943	486	0.8126608337622233	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	444	10	1828	6	4	28	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3719621-3720050	Cluster_902	Pocillopora_meandrina_HIv1___Sc0000002	3719621	3720050	430	106	26	1.0	+	UGUGAGGAUAGCAGCUUUUGAAAAAACAUU	67	0	103	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3725150-3726723	Cluster_903	Pocillopora_meandrina_HIv1___Sc0000002	3725150	3726723	1574	10768	1298	0.027210252600297177	-	UGUGCUUAAAAAUCUCUGGCCCAAAUACCUU	1574	45	10351	23	50	83	216	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3730451-3730897	Cluster_904	Pocillopora_meandrina_HIv1___Sc0000002	3730451	3730897	447	500	149	0.572	.	UGUGAACACGAUGAAACACCUUGCCAAA	43	4	398	0	6	60	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3730961-3731833	Cluster_905	Pocillopora_meandrina_HIv1___Sc0000002	3730961	3731833	873	8432	941	0.8107210626185958	+	UACUUGUCGAAGUCCUGGCCCUCUAGCC	2110	70	7524	22	136	303	377	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3742641-3743070	Cluster_906	Pocillopora_meandrina_HIv1___Sc0000002	3742641	3743070	430	140	46	1.0	+	UGCGAUCGCCGCAAAGAACUUCCUUUACGA	60	0	136	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3745169-3745980	Cluster_907	Pocillopora_meandrina_HIv1___Sc0000002	3745169	3745980	812	5890	461	0.9918505942275042	+	UGGGUUCUCGAUCACGUCUAAAUACACG	1206	23	5734	4	15	75	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3750061-3750938	Cluster_908	Pocillopora_meandrina_HIv1___Sc0000002	3750061	3750938	878	1248	276	0.9871794871794872	+	UUAUUUGCACUAUUGUGGAAAAUUCCUGC	236	16	1218	8	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3751156-3751595	Cluster_909	Pocillopora_meandrina_HIv1___Sc0000002	3751156	3751595	440	319	131	0.7774294670846394	.	UCACGGUAGUAGUGUUGUUCAAU	31	4	261	2	1	37	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3765212-3765640	Cluster_910	Pocillopora_meandrina_HIv1___Sc0000002	3765212	3765640	429	157	76	0.9617834394904459	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	24	0	153	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3766723-3767149	Cluster_911	Pocillopora_meandrina_HIv1___Sc0000002	3766723	3767149	427	147	85	0.8707482993197279	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	16	1	128	1	3	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3767638-3768041	Cluster_912	Pocillopora_meandrina_HIv1___Sc0000002	3767638	3768041	404	173	94	0.8728323699421965	+	UACUGGAAUAAUAACUUUACGAUCAACA	13	3	153	2	5	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3777071-3777480	Cluster_913	Pocillopora_meandrina_HIv1___Sc0000002	3777071	3777480	410	148	72	0.25	.	AAGAAGCGCAGCUCUGAAGUCUUUGCCUG	17	1	139	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3841944-3842042	Cluster_914	Pocillopora_meandrina_HIv1___Sc0000002	3841944	3842042	99	106356	263	0.0	-	UUGUGUAACUCCCUAAGGAAGG	66971	4181	3	2786	98832	535	19	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:3888853-3889274	Cluster_915	Pocillopora_meandrina_HIv1___Sc0000002	3888853	3889274	422	80	29	0.9875	+	CAGUGGGCUGUAGACUCAAACUUGGGG	16	8	60	3	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3903134-3903760	Cluster_916	Pocillopora_meandrina_HIv1___Sc0000002	3903134	3903760	627	328	108	0.036585365853658534	-	AAGUUUGAAAGGGUUAAGGAACAAGAGC	41	12	273	14	3	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3940704-3941465	Cluster_917	Pocillopora_meandrina_HIv1___Sc0000002	3940704	3941465	762	713	159	0.17391304347826086	-	UUAACCGUUAUAGUUUUGACUUGAAUAU	106	4	631	3	36	3	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3941649-3942338	Cluster_918	Pocillopora_meandrina_HIv1___Sc0000002	3941649	3942338	690	1537	188	0.020169160702667534	-	GAUUGGAACAGUCAUCAGACGGGUGGACA	447	57	1361	9	20	68	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4018836-4019275	Cluster_919	Pocillopora_meandrina_HIv1___Sc0000002	4018836	4019275	440	7387	799	0.9955326925680249	+	GCACAUAUACUAAAAUUGGAACGAUA	403	1123	3402	632	618	1026	586	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4047421-4047934	Cluster_920	Pocillopora_meandrina_HIv1___Sc0000002	4047421	4047934	514	2287	315	0.7870572802798426	.	AGAGAUCUUAGAAAACGAUCGUGUGUGCA	432	31	2205	2	5	26	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4048071-4048664	Cluster_921	Pocillopora_meandrina_HIv1___Sc0000002	4048071	4048664	594	1064	273	0.05733082706766917	-	UGUUGAAAGGGAGACAUUAAAGCGAUA	83	1	1025	2	16	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4048723-4049272	Cluster_922	Pocillopora_meandrina_HIv1___Sc0000002	4048723	4049272	550	680	210	0.325	.	ACGAUUUAGAUGCCAAGAUUGAGAACCUCU	72	3	624	3	8	12	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4049288-4049710	Cluster_923	Pocillopora_meandrina_HIv1___Sc0000002	4049288	4049710	423	113	53	0.168141592920354	-	UUUUGUGUUAUCUUGUCUUGGAGA	16	2	74	4	0	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4567952-4568379	Cluster_924	Pocillopora_meandrina_HIv1___Sc0000002	4567952	4568379	428	149	52	0.040268456375838924	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	38	2	142	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4727880-4728312	Cluster_925	Pocillopora_meandrina_HIv1___Sc0000002	4727880	4728312	433	194	80	0.18556701030927836	-	UGUGAUUUCAACUGUGAGUGUCAGAA	17	5	164	2	2	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4728526-4728984	Cluster_926	Pocillopora_meandrina_HIv1___Sc0000002	4728526	4728984	459	315	109	0.04126984126984127	-	UGUUCUGUUAAUUGUUUGUCUGAGAUGC	44	5	286	1	4	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4807583-4808012	Cluster_927	Pocillopora_meandrina_HIv1___Sc0000002	4807583	4808012	430	164	57	0.006097560975609756	-	AAACGAUUGAAUAGCAUAACUGAUGAACUA	28	1	163	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4856630-4857723	Cluster_928	Pocillopora_meandrina_HIv1___Sc0000002	4856630	4857723	1094	1039	418	0.9769008662175168	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	82	11	999	4	0	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4857758-4858161	Cluster_929	Pocillopora_meandrina_HIv1___Sc0000002	4857758	4858161	404	150	93	0.9066666666666666	+	UGGGAAUCCGAAUCGUGGUACAAAGUCA	17	3	131	4	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4858382-4858807	Cluster_930	Pocillopora_meandrina_HIv1___Sc0000002	4858382	4858807	426	230	128	0.9695652173913043	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	26	5	208	3	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4859814-4860864	Cluster_931	Pocillopora_meandrina_HIv1___Sc0000002	4859814	4860864	1051	869	370	0.9608745684695051	+	UAACAUCUCUCUUUCCGACUUUAACAGC	52	5	825	7	7	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4860993-4862594	Cluster_932	Pocillopora_meandrina_HIv1___Sc0000002	4860993	4862594	1602	3199	1224	0.8940293841825571	+	UGAAAUUGACACCACGGGAUUUUGCUCUAU	102	44	2920	30	33	55	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4992098-4992528	Cluster_933	Pocillopora_meandrina_HIv1___Sc0000002	4992098	4992528	431	1934	134	0.002068252326783868	-	UUGGAAUUCGAAGCAAGUAACAAUUGACAGG	539	3	1920	5	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5433888-5434317	Cluster_934	Pocillopora_meandrina_HIv1___Sc0000002	5433888	5434317	430	326	49	0.0	-	UUCCAUGACUCUGUUUAAACGAAAACGAAC	197	0	323	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5496902-5497540	Cluster_935	Pocillopora_meandrina_HIv1___Sc0000002	5496902	5497540	639	313	148	0.670926517571885	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	50	3	255	8	9	17	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5604506-5604918	Cluster_936	Pocillopora_meandrina_HIv1___Sc0000002	5604506	5604918	413	221	165	0.0	-	CUUGUAACAAAGAUCGUGGGCA	8	59	83	19	26	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5605961-5606377	Cluster_937	Pocillopora_meandrina_HIv1___Sc0000002	5605961	5606377	417	170	128	0.0	-	AGAAAUUGUGUGCUUCGACA	5	49	58	19	19	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5647892-5648347	Cluster_938	Pocillopora_meandrina_HIv1___Sc0000002	5647892	5648347	456	358	69	0.9860335195530726	+	UUCUGUUGUUUUUGUUCCCU	37	174	4	43	87	47	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5730888-5731313	Cluster_939	Pocillopora_meandrina_HIv1___Sc0000002	5730888	5731313	426	189	87	0.9947089947089947	+	UGAUCCGGAGCGCUCCCGAACGCCUC	27	2	182	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5864716-5865274	Cluster_940	Pocillopora_meandrina_HIv1___Sc0000002	5864716	5865274	559	705	251	0.573049645390071	.	GGGAAUUAGAGCCUGUGGAACAGU	103	7	440	18	12	66	162	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5865631-5866439	Cluster_941	Pocillopora_meandrina_HIv1___Sc0000002	5865631	5866439	809	1650	480	0.0030303030303030303	-	UCGGCUAUUCACUCUAUGAGCGAUAUCAAU	175	3	1588	10	9	5	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5883575-5884385	Cluster_942	Pocillopora_meandrina_HIv1___Sc0000002	5883575	5884385	811	404	236	0.8688118811881188	+	UGAUUUUGGAAUGUUGUUUACGUUGUG	16	4	368	4	1	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6062165-6062583	Cluster_943	Pocillopora_meandrina_HIv1___Sc0000002	6062165	6062583	419	98	55	1.0	+	UGAGCUACUGUGUGACGCCGGUCUUACUUU	20	0	94	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6062914-6063344	Cluster_944	Pocillopora_meandrina_HIv1___Sc0000002	6062914	6063344	431	467	226	0.9935760171306209	+	UAUUCUUUAGAAAUCGACUUGCUUGAUGCA	23	2	456	2	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6066733-6067141	Cluster_945	Pocillopora_meandrina_HIv1___Sc0000002	6066733	6067141	409	147	57	0.32653061224489793	.	UGAUCUUAUUUCAAAUAAUUCUUCUUGACUG	22	2	101	2	2	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6068771-6069193	Cluster_946	Pocillopora_meandrina_HIv1___Sc0000002	6068771	6069193	423	212	150	0.6084905660377359	.	AAAGUCUUCAAAGAAAUCUGUCCU	8	8	171	4	5	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6069257-6069690	Cluster_947	Pocillopora_meandrina_HIv1___Sc0000002	6069257	6069690	434	319	101	0.9811912225705329	+	UGAUGAGAGGUAAUCUGGAGCCUGACC	61	1	310	4	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6070145-6070561	Cluster_948	Pocillopora_meandrina_HIv1___Sc0000002	6070145	6070561	417	131	77	0.9847328244274809	+	UGCUCAUAUCUAAUAGAACUACUGCCGUU	14	2	124	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6072481-6073528	Cluster_949	Pocillopora_meandrina_HIv1___Sc0000002	6072481	6073528	1048	646	299	0.5743034055727554	.	UGUAGUAUUUCCGAGCCUUUUCGCACUU	41	3	558	2	10	32	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6079695-6081472	Cluster_950	Pocillopora_meandrina_HIv1___Sc0000002	6079695	6081472	1778	6135	1610	0.8981255093724532	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	326	31	5752	49	41	61	201	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6081805-6084218	Cluster_951	Pocillopora_meandrina_HIv1___Sc0000002	6081805	6084218	2414	3641	1316	0.868442735512222	+	UACUCGAAAUCUCCAAUGACUGCAUUUGA	274	27	3390	27	31	41	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6090515-6091327	Cluster_952	Pocillopora_meandrina_HIv1___Sc0000002	6090515	6091327	813	691	103	1.0	+	UAAGACAAUAAUUGGUACUGCAACGAGUGU	76	0	691	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6094144-6095261	Cluster_953	Pocillopora_meandrina_HIv1___Sc0000002	6094144	6095261	1118	5223	937	0.8577445912310933	+	UGAGAUUGUUAUUCCAUCCUCCUGGA	540	24	4662	16	21	382	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6099998-6101266	Cluster_954	Pocillopora_meandrina_HIv1___Sc0000002	6099998	6101266	1269	1782	553	0.9354657687991021	+	UGACAUUACUCGUGGGUACCAAAACUGUGU	65	16	1658	5	14	45	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6102732-6103990	Cluster_955	Pocillopora_meandrina_HIv1___Sc0000002	6102732	6103990	1259	5333	1140	0.7815488468029251	.	UUUCAAAUGCUUUUGUAGAUCAUCUCCAAA	498	41	4850	34	61	144	203	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6511195-6511674	Cluster_956	Pocillopora_meandrina_HIv1___Sc0000002	6511195	6511674	480	790	247	0.020253164556962026	-	GCGCGGAUGAGCCUCACUGGUGUGGGGU	94	220	470	46	23	15	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6783071-6783501	Cluster_957	Pocillopora_meandrina_HIv1___Sc0000002	6783071	6783501	431	451	64	0.9866962305986696	+	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	147	3	441	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6892666-6894008	Cluster_958	Pocillopora_meandrina_HIv1___Sc0000002	6892666	6894008	1343	11173	1327	0.879710015215251	+	UACUUUCUGAUUGACUUGGAGUGUGGGG	1835	88	10161	37	54	217	616	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6894228-6894656	Cluster_959	Pocillopora_meandrina_HIv1___Sc0000002	6894228	6894656	429	173	24	0.9884393063583815	+	UUGACUGACAGAAGAUCUGGAAACUGA	47	2	160	3	5	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7339211-7339640	Cluster_960	Pocillopora_meandrina_HIv1___Sc0000002	7339211	7339640	430	85	22	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	34	0	84	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7342295-7343168	Cluster_961	Pocillopora_meandrina_HIv1___Sc0000002	7342295	7343168	874	533	279	0.9174484052532833	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	17	8	497	2	5	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7372934-7373361	Cluster_962	Pocillopora_meandrina_HIv1___Sc0000002	7372934	7373361	428	167	47	0.9580838323353293	+	UAAGUUGAUCUCCUACAGUUUGACAUGU	40	3	163	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7745977-7746399	Cluster_963	Pocillopora_meandrina_HIv1___Sc0000002	7745977	7746399	423	182	112	0.005494505494505495	-	CAUUGCUCGAGUUUUGACUGUUAUCA	21	37	100	10	17	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7970885-7971391	Cluster_964	Pocillopora_meandrina_HIv1___Sc0000002	7970885	7971391	507	193	81	1.0	+	UAUUUUUAAUCUCUUCUAUACCCUCUUGGA	19	0	192	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8140569-8140992	Cluster_965	Pocillopora_meandrina_HIv1___Sc0000002	8140569	8140992	424	80	29	1.0	+	AUGAUGUCGAGCGUUUUCGGAAUGGGCA	18	1	63	4	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8468347-8468765	Cluster_966	Pocillopora_meandrina_HIv1___Sc0000002	8468347	8468765	419	139	6	0.0	-	AUGUAAGGAGAAGAUUUUU	125	138	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8530203-8530636	Cluster_967	Pocillopora_meandrina_HIv1___Sc0000002	8530203	8530636	434	852	96	0.9847417840375586	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	299	2	844	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8530938-8531364	Cluster_968	Pocillopora_meandrina_HIv1___Sc0000002	8530938	8531364	427	348	94	0.005747126436781609	-	AAUGGGAAAACGAGAACAGCGUG	44	1	171	12	3	77	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8797244-8797663	Cluster_969	Pocillopora_meandrina_HIv1___Sc0000002	8797244	8797663	420	621	41	1.0	+	GUCACGUCGGGGUCACCA	223	620	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8842566-8843460	Cluster_970	Pocillopora_meandrina_HIv1___Sc0000002	8842566	8843460	895	494	192	0.291497975708502	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	64	9	398	6	4	12	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8843642-8844337	Cluster_971	Pocillopora_meandrina_HIv1___Sc0000002	8843642	8844337	696	876	87	0.01598173515981735	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGU	266	3	860	1	2	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9033889-9034316	Cluster_972	Pocillopora_meandrina_HIv1___Sc0000002	9033889	9034316	428	241	152	0.991701244813278	+	UGAAAUGCGAGAUGUAGUUGAUGAAGUCAAG	11	30	192	5	8	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9043627-9044105	Cluster_973	Pocillopora_meandrina_HIv1___Sc0000002	9043627	9044105	479	9726	372	0.017067653711700596	-	GGAAAAUCCAGGACCUACAAUAUUUGAUGU	3031	15	9395	22	9	62	223	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9051075-9051502	Cluster_974	Pocillopora_meandrina_HIv1___Sc0000002	9051075	9051502	428	196	76	0.02040816326530612	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	1	180	0	1	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9080238-9080665	Cluster_975	Pocillopora_meandrina_HIv1___Sc0000002	9080238	9080665	428	563	57	0.012433392539964476	-	UGAAACUCUGAUCUGAAAAUAUUUGUC	223	1	559	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9166314-9166741	Cluster_976	Pocillopora_meandrina_HIv1___Sc0000002	9166314	9166741	428	134	49	0.6567164179104478	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	37	4	124	1	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9505993-9506400	Cluster_977	Pocillopora_meandrina_HIv1___Sc0000002	9505993	9506400	408	168	117	0.2976190476190476	.	UUAAAAAGACGAGCUCGACG	9	97	4	40	24	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9556404-9556827	Cluster_978	Pocillopora_meandrina_HIv1___Sc0000002	9556404	9556827	424	73	10	0.9315068493150684	+	UGGAUUAUCAUUUUUUGUUAGUGUUGGUA	36	0	72	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9690196-9690613	Cluster_979	Pocillopora_meandrina_HIv1___Sc0000002	9690196	9690613	418	200	107	0.705	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	25	90	49	41	13	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9784858-9785294	Cluster_980	Pocillopora_meandrina_HIv1___Sc0000002	9784858	9785294	437	1378	154	0.9622641509433962	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	537	22	1336	4	4	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9791938-9792368	Cluster_981	Pocillopora_meandrina_HIv1___Sc0000002	9791938	9792368	431	1375	103	0.0	-	CGAUCUAACAAGAACAAUAUGUGCUGACU	517	1	1365	1	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9806413-9806891	Cluster_982	Pocillopora_meandrina_HIv1___Sc0000002	9806413	9806891	479	1058	161	0.09546313799621928	-	UCAGGAUGCUUAAGGAAAACAGGUGGA	264	45	968	12	3	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9890408-9890826	Cluster_983	Pocillopora_meandrina_HIv1___Sc0000002	9890408	9890826	419	203	99	0.9261083743842364	+	UACGUUUUAGUUCGAAUUGUUGGGACCU	17	3	190	0	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10075799-10076224	Cluster_984	Pocillopora_meandrina_HIv1___Sc0000002	10075799	10076224	426	72	23	1.0	+	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	36	2	69	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10079214-10079641	Cluster_985	Pocillopora_meandrina_HIv1___Sc0000002	10079214	10079641	428	351	47	0.03133903133903134	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	201	2	348	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10097278-10097878	Cluster_986	Pocillopora_meandrina_HIv1___Sc0000002	10097278	10097878	601	630	219	0.5761904761904761	.	UGCGAUUACAGAGGUGCGUUGGAACUCA	129	29	553	15	7	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10098007-10098516	Cluster_987	Pocillopora_meandrina_HIv1___Sc0000002	10098007	10098516	510	634	176	0.9574132492113565	+	AAUGGGAAAACGAGAACAGCGUGA	73	15	352	12	7	107	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10237076-10237574	Cluster_988	Pocillopora_meandrina_HIv1___Sc0000002	10237076	10237574	499	555	67	0.007207207207207207	-	UUAUGAGUGAACCUUUCAUCGAGAAACAUG	158	4	542	4	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10291453-10292280	Cluster_989	Pocillopora_meandrina_HIv1___Sc0000002	10291453	10292280	828	410	107	0.9780487804878049	+	UAGGACAACUGAGAAUCCACGUAGACUC	115	2	400	1	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10423172-10423595	Cluster_990	Pocillopora_meandrina_HIv1___Sc0000002	10423172	10423595	424	145	31	0.006896551724137931	-	GUGUGUGUGUGUCUCUCUGUCU	40	34	16	7	63	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10556606-10557024	Cluster_991	Pocillopora_meandrina_HIv1___Sc0000002	10556606	10557024	419	125	6	0.0	-	GUGAGGGAACUGGCUCUUG	103	124	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10652369-10652797	Cluster_992	Pocillopora_meandrina_HIv1___Sc0000002	10652369	10652797	429	88	23	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	39	0	87	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10654659-10655068	Cluster_993	Pocillopora_meandrina_HIv1___Sc0000002	10654659	10655068	410	76	34	0.25	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	18	0	75	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10656468-10656897	Cluster_994	Pocillopora_meandrina_HIv1___Sc0000002	10656468	10656897	430	351	45	0.9971509971509972	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	132	0	351	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10657860-10658289	Cluster_995	Pocillopora_meandrina_HIv1___Sc0000002	10657860	10658289	430	1776	162	0.9926801801801802	+	AUGGGUCUUAUUGAGCAUUACAAAACAGCA	769	19	1685	16	6	9	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10689132-10689551	Cluster_996	Pocillopora_meandrina_HIv1___Sc0000002	10689132	10689551	420	117	85	0.9914529914529915	+	CAAACGUGAUUUGAGCAGAUUU	5	39	33	10	16	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10689730-10690137	Cluster_997	Pocillopora_meandrina_HIv1___Sc0000002	10689730	10690137	408	166	111	1.0	+	CAUGUGACCAGUCUUGUAGAGAACA	5	48	62	11	13	21	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10725804-10726233	Cluster_998	Pocillopora_meandrina_HIv1___Sc0000002	10725804	10726233	430	146	48	0.9863013698630136	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	22	0	143	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10726293-10726713	Cluster_999	Pocillopora_meandrina_HIv1___Sc0000002	10726293	10726713	421	189	107	0.8412698412698413	+	UGUAGAGAAUCAACCGCUGAGAUAUCUG	8	20	148	5	2	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10791059-10791611	Cluster_1000	Pocillopora_meandrina_HIv1___Sc0000002	10791059	10791611	553	247	84	0.9311740890688259	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	39	1	220	2	2	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10792850-10794072	Cluster_1001	Pocillopora_meandrina_HIv1___Sc0000002	10792850	10794072	1223	1995	492	0.8095238095238095	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	486	11	1876	5	18	26	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10810071-10810499	Cluster_1002	Pocillopora_meandrina_HIv1___Sc0000002	10810071	10810499	429	443	60	0.02708803611738149	-	UAAUCGACGAAUACAAUCCAGGUAUAACU	324	1	430	1	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10810861-10811263	Cluster_1003	Pocillopora_meandrina_HIv1___Sc0000002	10810861	10811263	403	134	51	0.0	-	UGGUUUUUCCGUAUCGUUGCGCAAGUAA	23	0	134	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10811366-10811817	Cluster_1004	Pocillopora_meandrina_HIv1___Sc0000002	10811366	10811817	452	2029	209	0.0	-	UGUGCAGUUGAAACAUAGACGCUUCUCGAGA	1146	3	1997	5	0	3	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10812246-10812676	Cluster_1005	Pocillopora_meandrina_HIv1___Sc0000002	10812246	10812676	431	183	57	0.0	-	UCCGUACAAGAGUGUUUAAUCUGCGCAAACU	82	0	182	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10824578-10825173	Cluster_1006	Pocillopora_meandrina_HIv1___Sc0000002	10824578	10825173	596	3970	542	0.9760705289672544	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	676	42	3730	29	32	51	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10845722-10845816	Cluster_1007	Pocillopora_meandrina_HIv1___Sc0000002	10845722	10845816	95	12003	340	0.00899775056235941	-	UUGCCGUUAACCCAAAACCUUCA	4844	286	129	442	5105	5860	181	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:10993606-10994752	Cluster_1008	Pocillopora_meandrina_HIv1___Sc0000002	10993606	10994752	1147	658	318	0.8936170212765957	+	UCAGAGAGGACGAUGCUAUUAACCCAGU	31	5	605	3	9	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10995534-10995982	Cluster_1009	Pocillopora_meandrina_HIv1___Sc0000002	10995534	10995982	449	299	146	0.903010033444816	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	37	1	273	2	2	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11007210-11008706	Cluster_1010	Pocillopora_meandrina_HIv1___Sc0000002	11007210	11008706	1497	1899	752	0.8672985781990521	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	73	26	1745	7	17	47	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11009550-11010451	Cluster_1011	Pocillopora_meandrina_HIv1___Sc0000002	11009550	11010451	902	1014	318	0.9102564102564102	+	UGAGACUUGUUGUUGGGUAACUGACGUG	111	7	959	4	0	19	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11010488-11012492	Cluster_1012	Pocillopora_meandrina_HIv1___Sc0000002	11010488	11012492	2005	6544	1742	0.7909535452322738	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	470	193	5882	28	40	176	225	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11350672-11351104	Cluster_1013	Pocillopora_meandrina_HIv1___Sc0000002	11350672	11351104	433	424	167	0.9976415094339622	+	GAAGAUUGUGGGUUCGACUCC	37	205	99	76	23	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11590390-11590812	Cluster_1014	Pocillopora_meandrina_HIv1___Sc0000002	11590390	11590812	423	193	117	0.48186528497409326	.	UCCGACUGUGAGUCCAAUGC	13	111	17	45	9	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11685056-11685474	Cluster_1015	Pocillopora_meandrina_HIv1___Sc0000002	11685056	11685474	419	390	18	0.9666666666666667	+	CGGCCUGAAAAAAAAAAA	286	383	5	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11846947-11847603	Cluster_1016	Pocillopora_meandrina_HIv1___Sc0000002	11846947	11847603	657	773	289	0.1539456662354463	-	UGUAGAAUCAAUCUGUUACUAAGACACC	102	9	711	11	7	10	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11943384-11943811	Cluster_1017	Pocillopora_meandrina_HIv1___Sc0000002	11943384	11943811	428	151	44	0.11920529801324503	-	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	31	1	147	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12343138-12343591	Cluster_1018	Pocillopora_meandrina_HIv1___Sc0000002	12343138	12343591	454	560	78	0.0	-	UACGAUGUUGUCUUGUCUGCAAGC	108	20	9	106	119	119	187	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12358290-12358718	Cluster_1019	Pocillopora_meandrina_HIv1___Sc0000002	12358290	12358718	429	356	81	0.1544943820224719	-	UAGUGUUUGAAUUUUUGAAAGAAAUGGUC	218	42	291	11	3	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12381688-12382117	Cluster_1020	Pocillopora_meandrina_HIv1___Sc0000002	12381688	12382117	430	158	38	0.0	-	GUAAGAAACCACUUAGAACCAUGGAUGACA	73	2	146	0	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12537655-12538076	Cluster_1021	Pocillopora_meandrina_HIv1___Sc0000002	12537655	12538076	422	79	27	0.012658227848101266	-	ACUGUCAGGAAUAAUAACUCCAGUAGAUU	18	1	61	2	3	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12847776-12848204	Cluster_1022	Pocillopora_meandrina_HIv1___Sc0000002	12847776	12848204	429	201	71	0.9552238805970149	+	UGCGAUACCGGUGCAGUGCUCUACCAAUU	49	17	166	9	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12849337-12849760	Cluster_1023	Pocillopora_meandrina_HIv1___Sc0000002	12849337	12849760	424	444	48	0.0045045045045045045	-	UUUGAGGCCUUGAACUUGCAGACA	59	42	1	22	81	156	142	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12946840-12947268	Cluster_1024	Pocillopora_meandrina_HIv1___Sc0000002	12946840	12947268	429	440	148	0.9613636363636363	+	UGUAGAAUCAAUCUGUUACUAAGACACC	80	2	417	9	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12947409-12947849	Cluster_1025	Pocillopora_meandrina_HIv1___Sc0000002	12947409	12947849	441	357	175	0.6442577030812325	.	UACCGACCUAUAUCCUUGCUUAGU	20	7	264	11	4	19	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12948059-12948461	Cluster_1026	Pocillopora_meandrina_HIv1___Sc0000002	12948059	12948461	403	178	119	0.8314606741573034	+	UGGACUCUAUAAUGUCUUUAAACAUGGU	9	3	163	0	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12949693-12950122	Cluster_1027	Pocillopora_meandrina_HIv1___Sc0000002	12949693	12950122	430	229	79	0.034934497816593885	-	UAAGAUAUCGUUAACAACUCGAAGAAGCG	38	2	222	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12972851-12973278	Cluster_1028	Pocillopora_meandrina_HIv1___Sc0000002	12972851	12973278	428	316	170	0.6107594936708861	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	42	78	183	26	7	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13141736-13142142	Cluster_1029	Pocillopora_meandrina_HIv1___Sc0000002	13141736	13142142	407	181	92	0.9281767955801105	+	UAAGAUUCCAAGAUAUUUAAAACAAGU	13	2	165	0	0	0	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13260092-13260514	Cluster_1030	Pocillopora_meandrina_HIv1___Sc0000002	13260092	13260514	423	129	51	0.15503875968992248	-	AUUCCGGUUACCGAGAUCUCGGU	42	7	19	7	15	78	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13280874-13281378	Cluster_1031	Pocillopora_meandrina_HIv1___Sc0000002	13280874	13281378	505	746	252	0.0	-	AGGAAGUGAUGUUGUAAUUUGCA	49	167	324	30	89	107	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13301878-13302293	Cluster_1032	Pocillopora_meandrina_HIv1___Sc0000002	13301878	13302293	416	136	67	0.47058823529411764	.	UGACUACCAAUGGAACCAGAAAGUGACA	14	41	65	17	11	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13313713-13314217	Cluster_1033	Pocillopora_meandrina_HIv1___Sc0000002	13313713	13314217	505	1450	478	0.9993103448275862	+	AGGAAAUGAUGUUGUAAU	35	308	571	102	144	194	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13354138-13354564	Cluster_1034	Pocillopora_meandrina_HIv1___Sc0000002	13354138	13354564	427	165	53	0.04242424242424243	-	UUGGUGCAUUUCGAUCCUUGCUGUUC	32	1	157	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13453546-13453972	Cluster_1035	Pocillopora_meandrina_HIv1___Sc0000002	13453546	13453972	427	196	43	0.3469387755102041	.	UGAUCUACAUGAAACUAUUCUCACACC	35	2	184	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13526667-13527088	Cluster_1036	Pocillopora_meandrina_HIv1___Sc0000002	13526667	13527088	422	857	33	0.0011668611435239206	-	CGGCCUGAAAAAAAAAAA	532	748	39	19	23	20	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13553543-13553957	Cluster_1037	Pocillopora_meandrina_HIv1___Sc0000002	13553543	13553957	415	97	22	0.0	-	CUUUCCGAGGUCACG	72	76	14	3	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13698198-13698628	Cluster_1038	Pocillopora_meandrina_HIv1___Sc0000002	13698198	13698628	431	1185	182	0.99915611814346	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	224	1	1173	1	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13773137-13773566	Cluster_1039	Pocillopora_meandrina_HIv1___Sc0000002	13773137	13773566	430	843	54	0.018979833926453145	-	GUGUAGAUCAGCCGACUUCAACAUGUUUCA	339	3	831	4	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13812879-13813306	Cluster_1040	Pocillopora_meandrina_HIv1___Sc0000002	13812879	13813306	428	201	17	0.9850746268656716	+	UCGAGACGUGAGCUUGGGCCGCCUGUGA	145	1	200	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14200611-14201078	Cluster_1041	Pocillopora_meandrina_HIv1___Sc0000002	14200611	14201078	468	345	152	0.3739130434782609	.	AAUGGGAAAACGAGAAUAGCGUA	56	24	185	15	5	75	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14203895-14204320	Cluster_1042	Pocillopora_meandrina_HIv1___Sc0000002	14203895	14204320	426	114	52	0.13157894736842105	-	UGUAUUUGCUGAUCUAUUUGACAUCCUU	12	5	104	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14286365-14286773	Cluster_1043	Pocillopora_meandrina_HIv1___Sc0000002	14286365	14286773	409	111	74	0.990990990990991	+	GACGGAGAAAGUGGAGCA	11	29	34	13	6	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14380365-14380783	Cluster_1044	Pocillopora_meandrina_HIv1___Sc0000002	14380365	14380783	419	122	67	0.5409836065573771	.	UUGGACUCACAGUCGGACGG	12	88	6	23	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14495754-14496184	Cluster_1045	Pocillopora_meandrina_HIv1___Sc0000002	14495754	14496184	431	594	52	1.0	+	UACUAAGUAGGUGCCUUCGAGAUGUUUA	162	2	587	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14689146-14689571	Cluster_1046	Pocillopora_meandrina_HIv1___Sc0000002	14689146	14689571	426	121	35	0.008264462809917356	-	GUGACUGAAAAAAAAAAAAAAAAAAAAAA	12	3	93	4	3	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14748982-14749487	Cluster_1047	Pocillopora_meandrina_HIv1___Sc0000002	14748982	14749487	506	585	166	0.7247863247863248	.	UUGGAACGUGUUGCUGAACGCUUGCG	101	40	462	9	33	14	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14800682-14801120	Cluster_1048	Pocillopora_meandrina_HIv1___Sc0000002	14800682	14801120	439	3105	282	0.0022544283413848632	-	UGUGACUGAAAAGAUCUUGAAGGAAUUUA	1478	12	2674	25	25	76	293	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14803374-14803892	Cluster_1049	Pocillopora_meandrina_HIv1___Sc0000002	14803374	14803892	519	416	192	0.03125	-	UUUCUGGUGAAUCUGGCAUAGCUGAGGCU	16	19	361	9	7	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14810100-14810529	Cluster_1050	Pocillopora_meandrina_HIv1___Sc0000002	14810100	14810529	430	231	95	0.5238095238095238	.	CACCCGGUCAAUUUUGCGUCAAAAAUAAUUU	27	8	182	2	5	6	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14815557-14815984	Cluster_1051	Pocillopora_meandrina_HIv1___Sc0000002	14815557	14815984	428	173	42	0.9653179190751445	+	UGAUUAAGAACGAUAAACUGGAACGUG	63	1	168	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14816225-14818006	Cluster_1052	Pocillopora_meandrina_HIv1___Sc0000002	14816225	14818006	1782	1759	643	0.8038658328595794	+	UGAGUCUUGGAUUGAAGUACGACAUCACGUG	75	9	1597	4	10	43	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14818832-14819261	Cluster_1053	Pocillopora_meandrina_HIv1___Sc0000002	14818832	14819261	430	231	124	0.47186147186147187	.	GCAAAUCGAAAUGAUGGUCGACUCCGGUGC	17	4	221	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14914671-14915087	Cluster_1054	Pocillopora_meandrina_HIv1___Sc0000002	14914671	14915087	417	146	82	0.5821917808219178	.	UUAUUUCUACAUAGAGUGAGCUCACAC	26	10	104	10	2	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14921910-14922397	Cluster_1055	Pocillopora_meandrina_HIv1___Sc0000002	14921910	14922397	488	567	100	0.012345679012345678	-	UUCAGAAUGAUCCUAGAUACGAACAUAGUC	54	2	551	2	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14957498-14958006	Cluster_1056	Pocillopora_meandrina_HIv1___Sc0000002	14957498	14958006	509	3480	256	0.06724137931034482	-	UACAGAACUAGACAACUAUAACAUAACGACU	1467	48	3227	0	25	137	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15113131-15113639	Cluster_1057	Pocillopora_meandrina_HIv1___Sc0000002	15113131	15113639	509	654	161	0.8119266055045872	+	UCGGUUUUCGCAAUUCCAUUGAACGACA	74	7	615	2	4	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15290742-15291230	Cluster_1058	Pocillopora_meandrina_HIv1___Sc0000002	15290742	15291230	489	3303	445	1.0	+	CGUGACCUCUCUGAUCCUG	178	721	1669	325	177	212	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15324522-15325223	Cluster_1059	Pocillopora_meandrina_HIv1___Sc0000002	15324522	15325223	702	256	118	0.91796875	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	33	1	244	0	4	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15326453-15326882	Cluster_1060	Pocillopora_meandrina_HIv1___Sc0000002	15326453	15326882	430	247	138	0.8744939271255061	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	36	2	226	0	3	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15410169-15410611	Cluster_1061	Pocillopora_meandrina_HIv1___Sc0000002	15410169	15410611	443	574	141	0.19337979094076654	-	UCCUUCACUCCAGAAUGUUUGGCCUCU	65	7	509	2	0	31	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15749261-15749351	Cluster_1062	Pocillopora_meandrina_HIv1___Sc0000002	15749261	15749351	91	267	31	1.0	+	ACGCUAGGAAGGGAUGCCGGGA	162	9	4	32	201	19	2	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:15762578-15763408	Cluster_1063	Pocillopora_meandrina_HIv1___Sc0000002	15762578	15763408	831	4824	283	0.0	-	UGUUACCAGGUACUUCGCACUGA	1808	248	99	163	1312	2761	241	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15781900-15782431	Cluster_1064	Pocillopora_meandrina_HIv1___Sc0000002	15781900	15782431	532	482	158	0.0	-	AUGGAGGGUUAAGAAAGGGGAU	33	93	190	32	82	28	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15893987-15894539	Cluster_1065	Pocillopora_meandrina_HIv1___Sc0000002	15893987	15894539	553	232	76	0.9353448275862069	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	35	2	204	2	5	16	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15894892-15895492	Cluster_1066	Pocillopora_meandrina_HIv1___Sc0000002	15894892	15895492	601	1459	283	0.7751884852638794	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	440	7	1367	6	12	17	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15991422-15991834	Cluster_1067	Pocillopora_meandrina_HIv1___Sc0000002	15991422	15991834	413	199	102	0.8944723618090452	+	UGCGAAUCUGAAAAUUGGACGGAGAGC	21	1	185	0	4	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15991967-15992491	Cluster_1068	Pocillopora_meandrina_HIv1___Sc0000002	15991967	15992491	525	278	135	0.935251798561151	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	32	1	262	0	2	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15992866-15993292	Cluster_1069	Pocillopora_meandrina_HIv1___Sc0000002	15992866	15993292	427	316	122	0.9240506329113924	+	UCCAAUCACACACAGUUCUCCUGCGGC	74	2	300	2	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15993376-15993916	Cluster_1070	Pocillopora_meandrina_HIv1___Sc0000002	15993376	15993916	541	356	153	0.699438202247191	.	UGCUUCAUUUUGGUUCUGUAGUAACACA	58	5	272	7	33	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15994673-15996216	Cluster_1071	Pocillopora_meandrina_HIv1___Sc0000002	15994673	15996216	1544	3393	840	0.9274977895667551	+	UAAGAUUUACACACUGAUCGACCAUGU	866	25	3214	33	10	45	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16076887-16077338	Cluster_1072	Pocillopora_meandrina_HIv1___Sc0000002	16076887	16077338	452	5987	167	0.012193085017537998	-	AUCUGUGGUUUUUUUAGGGUGG	1784	1831	5	482	3400	251	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16084908-16085406	Cluster_1073	Pocillopora_meandrina_HIv1___Sc0000002	16084908	16085406	499	9601	504	1.0	+	CUGAGACGAAGCAAACUGAUAUUU	3552	179	2948	115	367	1492	4500	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16086692-16087210	Cluster_1074	Pocillopora_meandrina_HIv1___Sc0000002	16086692	16087210	519	1268	350	1.0	+	UGAGACGAAGCAAACUGAAAUUA	124	158	449	70	172	236	183	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16106559-16106650	Cluster_1075	Pocillopora_meandrina_HIv1___Sc0000002	16106559	16106650	92	2969	94	1.0	+	UGUUAUUUUUAUCGUCCAUUAGU	1172	1055	9	61	209	1607	28	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:16801047-16801473	Cluster_1076	Pocillopora_meandrina_HIv1___Sc0000002	16801047	16801473	427	244	135	0.11475409836065574	-	UGAGUCGAGGUUAUUCACAAUACGAGC	44	5	221	1	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16868237-16868878	Cluster_1077	Pocillopora_meandrina_HIv1___Sc0000002	16868237	16868878	642	524	255	0.0019083969465648854	-	AUCCGGCUCGAAGGACCA	72	100	406	1	6	4	7	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000002:16915483-16915899	Cluster_1078	Pocillopora_meandrina_HIv1___Sc0000002	16915483	16915899	417	85	39	0.9882352941176471	+	UAAACGCUGUGCUUUCUCGUAAUUUCUUUG	16	0	80	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16938840-16939269	Cluster_1079	Pocillopora_meandrina_HIv1___Sc0000002	16938840	16939269	430	250	57	0.996	+	UGAUCAAUUUGUGAAUGUCUGCACACCACU	80	1	249	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16988102-16988565	Cluster_1080	Pocillopora_meandrina_HIv1___Sc0000002	16988102	16988565	464	382	221	0.5287958115183246	.	UUUCGAGACGUCGCGACGGU	19	177	110	65	17	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16990087-16990503	Cluster_1081	Pocillopora_meandrina_HIv1___Sc0000002	16990087	16990503	417	120	66	0.9416666666666667	+	UUGUUAACUUUGUCUACCAGAUCUUAUC	14	17	95	3	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16990790-16991219	Cluster_1082	Pocillopora_meandrina_HIv1___Sc0000002	16990790	16991219	430	172	75	0.9244186046511628	+	UGAUAUAAAUUACGUCAUAUGGAAUGUAUU	44	7	154	0	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17295508-17295925	Cluster_1083	Pocillopora_meandrina_HIv1___Sc0000002	17295508	17295925	418	493	4	0.0	-	CUUUGCUCUGAAGUGGAA	483	493	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17411375-17411793	Cluster_1084	Pocillopora_meandrina_HIv1___Sc0000002	17411375	17411793	419	315	231	0.9968253968253968	+	UUGGAUCGUGAGUAAGACGCA	7	99	116	27	34	14	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17612209-17612634	Cluster_1085	Pocillopora_meandrina_HIv1___Sc0000002	17612209	17612634	426	112	48	0.9464285714285714	+	UACUUAGCACUGUGACCUGGGCUGUC	21	1	99	0	4	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17612844-17613361	Cluster_1086	Pocillopora_meandrina_HIv1___Sc0000002	17612844	17613361	518	1114	184	0.9730700179533214	+	UGGAAUAUAGUCCAGGUCUUUCUGAU	172	19	1074	8	5	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17766802-17767230	Cluster_1087	Pocillopora_meandrina_HIv1___Sc0000002	17766802	17767230	429	115	41	0.991304347826087	+	UCAAGAUCUUCCUCUUUGUCGUACCCGGA	65	6	106	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17800794-17801409	Cluster_1088	Pocillopora_meandrina_HIv1___Sc0000002	17800794	17801409	616	440	172	0.6136363636363636	.	CGCAUCUUUAUCCAUCACUCAAAGCGGACU	63	6	372	3	3	14	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17801485-17802229	Cluster_1089	Pocillopora_meandrina_HIv1___Sc0000002	17801485	17802229	745	545	209	0.06422018348623854	-	UGAAAGACAUUGCAGAUACUCCAUGGGG	48	3	526	1	2	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18043378-18043918	Cluster_1090	Pocillopora_meandrina_HIv1___Sc0000002	18043378	18043918	541	2187	250	1.0	+	GUGGUUUUAAUUCUUGUGAACAGGA	871	30	1802	33	65	84	173	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18085264-18085716	Cluster_1091	Pocillopora_meandrina_HIv1___Sc0000002	18085264	18085716	453	507	104	0.9684418145956607	+	UAACUAGAUUCCACAUCAACAUU	107	30	36	59	74	281	27	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18091100-18091512	Cluster_1092	Pocillopora_meandrina_HIv1___Sc0000002	18091100	18091512	413	111	75	0.009009009009009009	-	GAUAUGAACAAACGUGCUGGAGAGCU	6	37	54	1	9	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18236792-18237221	Cluster_1093	Pocillopora_meandrina_HIv1___Sc0000002	18236792	18237221	430	146	70	0.04794520547945205	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	33	1	139	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18758455-18759131	Cluster_1094	Pocillopora_meandrina_HIv1___Sc0000002	18758455	18759131	677	762	278	0.013123359580052493	-	UGUGAAUUUACUGACCAUCUCGACAU	40	4	734	3	7	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18981108-18982284	Cluster_1095	Pocillopora_meandrina_HIv1___Sc0000002	18981108	18982284	1177	6814	1083	0.040064572938068685	-	UGAAAACUCUUUGCGAUCUCAUUUAUGG	444	24	6640	18	13	58	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19017322-19017749	Cluster_1096	Pocillopora_meandrina_HIv1___Sc0000002	19017322	19017749	428	90	20	0.011111111111111112	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	44	0	89	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19137193-19137621	Cluster_1097	Pocillopora_meandrina_HIv1___Sc0000002	19137193	19137621	429	214	102	0.4439252336448598	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	37	11	192	3	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19218596-19219028	Cluster_1098	Pocillopora_meandrina_HIv1___Sc0000002	19218596	19219028	433	535	102	0.9887850467289719	+	UGUUUCAACUCUUGAAUGAUUCUUGCUU	104	1	527	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19227899-19228326	Cluster_1099	Pocillopora_meandrina_HIv1___Sc0000002	19227899	19228326	428	134	40	0.8283582089552238	+	UUGUCUACAAGAAGCUUGACCAUUUUGU	52	3	126	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19229617-19230339	Cluster_1100	Pocillopora_meandrina_HIv1___Sc0000002	19229617	19230339	723	1782	316	0.17732884399551066	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	440	38	1685	17	11	16	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19435173-19435585	Cluster_1101	Pocillopora_meandrina_HIv1___Sc0000002	19435173	19435585	413	206	144	0.9223300970873787	+	GUGCGUCGUCAAGCUGUA	8	68	90	12	7	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19445465-19445890	Cluster_1102	Pocillopora_meandrina_HIv1___Sc0000002	19445465	19445890	426	232	138	0.9870689655172413	+	CAAGGCUGUGCUUUGUUGUAAUGUACU	18	45	125	15	19	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19537003-19537432	Cluster_1103	Pocillopora_meandrina_HIv1___Sc0000002	19537003	19537432	430	102	26	0.00980392156862745	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	30	2	98	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19538138-19538717	Cluster_1104	Pocillopora_meandrina_HIv1___Sc0000002	19538138	19538717	580	3076	562	0.9996749024707412	+	UUGGAUUGUUGGAGUGAUGUGCA	328	708	1352	130	187	493	206	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19565330-19565759	Cluster_1105	Pocillopora_meandrina_HIv1___Sc0000002	19565330	19565759	430	277	67	0.0	-	GAAUGGAACAAAAGUCGAGGCAGUAUGUG	79	9	256	7	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:96476-96895	Cluster_1106	Pocillopora_meandrina_HIv1___Sc0000003	96476	96895	420	248	13	0.012096774193548387	-	CGGUCUGCAAUUUUGGGAGC	173	208	0	39	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:128499-128910	Cluster_1107	Pocillopora_meandrina_HIv1___Sc0000003	128499	128910	412	141	99	1.0	+	GUGGGCUGUGCCUUGGCU	8	47	44	19	14	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:174205-175182	Cluster_1108	Pocillopora_meandrina_HIv1___Sc0000003	174205	175182	978	771	265	0.05188067444876784	-	UGAUCAAGUUUCCUAUCGCCUGUAAACA	85	3	733	4	7	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:207738-208184	Cluster_1109	Pocillopora_meandrina_HIv1___Sc0000003	207738	208184	447	607	69	0.7380560131795717	.	GCACCAAUCAGAGCUGUAGAAAAACAACU	216	6	594	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:295505-296483	Cluster_1110	Pocillopora_meandrina_HIv1___Sc0000003	295505	296483	979	1507	361	0.43928334439283345	.	UAAGCCUUUGGAACAACAUCAGUGACAA	123	32	1309	22	15	43	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:313570-314553	Cluster_1111	Pocillopora_meandrina_HIv1___Sc0000003	313570	314553	984	869	352	0.5776754890678941	.	GGACAUACCAAUUCUCGCAGACGU	73	5	667	0	10	38	149	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:314771-315207	Cluster_1112	Pocillopora_meandrina_HIv1___Sc0000003	314771	315207	437	482	149	0.12033195020746888	-	UCGACUUGUUAAACUCUUCCAUCUGAGUAGU	49	3	458	4	4	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:448959-449506	Cluster_1113	Pocillopora_meandrina_HIv1___Sc0000003	448959	449506	548	770	464	1.0	+	GAGCGAUGAUUAAACUAGAGAAAUGAGC	20	122	372	69	75	63	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:467252-467911	Cluster_1114	Pocillopora_meandrina_HIv1___Sc0000003	467252	467911	660	625	165	0.0	-	GAGCUGUGACGAAAUAUAUGU	107	115	175	161	97	33	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:495066-495158	Cluster_1115	Pocillopora_meandrina_HIv1___Sc0000003	495066	495158	93	990	64	1.0	+	UAUAUUGUACGACUCUCAUCGU	438	71	6	12	681	173	47	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000003:665774-666190	Cluster_1116	Pocillopora_meandrina_HIv1___Sc0000003	665774	666190	417	72	10	0.9583333333333334	+	AUUGUUUUUCAUUUGUUGA	57	70	0	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:788738-789165	Cluster_1117	Pocillopora_meandrina_HIv1___Sc0000003	788738	789165	428	153	55	0.05228758169934641	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	39	2	148	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:879187-879850	Cluster_1118	Pocillopora_meandrina_HIv1___Sc0000003	879187	879850	664	990	403	0.998989898989899	+	UGGAUAGCAUUGCAAGGGACAAUU	78	137	475	74	90	79	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1018753-1019619	Cluster_1119	Pocillopora_meandrina_HIv1___Sc0000003	1018753	1019619	867	1504	426	0.5425531914893617	.	UCUUUGUUGGAUUCAUCGUCUUUAGCUU	143	10	1338	33	14	22	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1364282-1364948	Cluster_1120	Pocillopora_meandrina_HIv1___Sc0000003	1364282	1364948	667	2763	1022	0.9743032935215346	+	GCUUAGCGCACGGUAGAGA	193	894	951	261	289	188	180	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1709656-1710326	Cluster_1121	Pocillopora_meandrina_HIv1___Sc0000003	1709656	1710326	671	567	389	0.9929453262786596	+	GUAGUUGGUUUCAGAAGU	7	119	238	40	65	53	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1751792-1752219	Cluster_1122	Pocillopora_meandrina_HIv1___Sc0000003	1751792	1752219	428	162	76	0.037037037037037035	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	16	0	128	8	2	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1752820-1753250	Cluster_1123	Pocillopora_meandrina_HIv1___Sc0000003	1752820	1753250	431	1274	129	0.01726844583987441	-	UGAAACUCUGGUCUGAAAAUAUUUGUC	588	16	1240	9	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1932935-1933362	Cluster_1124	Pocillopora_meandrina_HIv1___Sc0000003	1932935	1933362	428	508	43	0.8956692913385826	+	UUGGAACGUGUUGCUGAACGCUUGUUGC	360	9	492	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1934606-1935033	Cluster_1125	Pocillopora_meandrina_HIv1___Sc0000003	1934606	1935033	428	575	66	0.9947826086956522	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	302	4	570	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1936185-1936612	Cluster_1126	Pocillopora_meandrina_HIv1___Sc0000003	1936185	1936612	428	664	50	0.009036144578313253	-	UGAAACUCUGAUCUGAAAAUAUUUUUA	440	1	660	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2241887-2242315	Cluster_1127	Pocillopora_meandrina_HIv1___Sc0000003	2241887	2242315	429	192	15	0.9635416666666666	+	UGGUUUGAUUGUCAGCAGUAGAUGAAAUA	154	0	192	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2476590-2477024	Cluster_1128	Pocillopora_meandrina_HIv1___Sc0000003	2476590	2477024	435	63481	750	0.0002520439186528253	-	AGGAUGGACAGUGAUUCAGAAA	27983	14473	16504	488	31712	104	200	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2614870-2615287	Cluster_1129	Pocillopora_meandrina_HIv1___Sc0000003	2614870	2615287	418	72	1	0.0	-	UUGAACUCGACCCUGUCG	72	72	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2620719-2621157	Cluster_1130	Pocillopora_meandrina_HIv1___Sc0000003	2620719	2621157	439	497	146	0.9517102615694165	+	UCAGUGACUUUUGAGACUAUUGGUAAUAAU	102	13	464	1	11	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2622155-2622589	Cluster_1131	Pocillopora_meandrina_HIv1___Sc0000003	2622155	2622589	435	239	90	0.8535564853556485	+	UGCUCUCGUUGUUGACUGAAGAAUCCAGCC	23	2	226	1	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2627197-2627614	Cluster_1132	Pocillopora_meandrina_HIv1___Sc0000003	2627197	2627614	418	89	1	1.0	+	UUGAACUCGACCCUGUCG	89	89	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2645319-2646049	Cluster_1133	Pocillopora_meandrina_HIv1___Sc0000003	2645319	2646049	731	277	112	0.9963898916967509	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	57	0	274	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2763211-2763632	Cluster_1134	Pocillopora_meandrina_HIv1___Sc0000003	2763211	2763632	422	106	27	0.0	-	UAAUUGUGAUUUUGUACUGUAGAAUAUCCA	17	26	57	6	7	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2763676-2764158	Cluster_1135	Pocillopora_meandrina_HIv1___Sc0000003	2763676	2764158	483	193969	1487	0.9999072016662456	+	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	85405	3869	189050	242	202	224	382	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2849464-2849939	Cluster_1136	Pocillopora_meandrina_HIv1___Sc0000003	2849464	2849939	476	372	142	0.005376344086021506	-	AGCUGGUGCUGGCCCAUCUAACUACAAGGU	119	30	317	4	6	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3008153-3009816	Cluster_1137	Pocillopora_meandrina_HIv1___Sc0000003	3008153	3009816	1664	13510	1419	0.11250925240562547	-	UUGGCUAGUAGCAUUCUUUCUGAUGGCU	1767	50	12670	44	102	137	507	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3012955-3013651	Cluster_1138	Pocillopora_meandrina_HIv1___Sc0000003	3012955	3013651	697	1219	471	0.2206726825266612	.	UGUUGUCCUUUGUUCAGUCUGAUUAACC	62	9	1110	10	10	38	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3014086-3014511	Cluster_1139	Pocillopora_meandrina_HIv1___Sc0000003	3014086	3014511	426	107	27	0.9719626168224299	+	GUUGACGUGAACGGUGUUAGAUGCCGAGC	41	0	102	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3014665-3015310	Cluster_1140	Pocillopora_meandrina_HIv1___Sc0000003	3014665	3015310	646	406	213	0.059113300492610835	-	UGAAUUCUUCGUAAACGGUUUCCUGGUC	30	2	389	1	2	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3015890-3016320	Cluster_1141	Pocillopora_meandrina_HIv1___Sc0000003	3015890	3016320	431	304	78	0.013157894736842105	-	UAUAUCUUCUUCGGACGCCCACGGCGCGCGA	77	0	297	0	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3033168-3033596	Cluster_1142	Pocillopora_meandrina_HIv1___Sc0000003	3033168	3033596	429	243	94	0.12345679012345678	-	UUCAAGCUCUUCUGGACUAGCAAUCUGCA	35	4	226	5	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3033676-3034111	Cluster_1143	Pocillopora_meandrina_HIv1___Sc0000003	3033676	3034111	436	413	157	0.24213075060532688	.	UGCUUCUCAUAGUCUGUUGGGUUCUUAAC	103	2	380	1	1	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3035420-3036545	Cluster_1144	Pocillopora_meandrina_HIv1___Sc0000003	3035420	3036545	1126	4701	711	0.32354818123803447	.	UCUAGAGACAUCAUCCCUGUGUAGAAACU	696	28	3895	34	144	121	479	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3036789-3037216	Cluster_1145	Pocillopora_meandrina_HIv1___Sc0000003	3036789	3037216	428	92	26	0.043478260869565216	-	UCGAAAUUGUUGUACUGCUGGAGUCGCA	44	1	86	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3048099-3049557	Cluster_1146	Pocillopora_meandrina_HIv1___Sc0000003	3048099	3049557	1459	2147	540	0.19469026548672566	-	UCUUUCUGGUUUUGUUUUUCGACGUAUC	161	17	1903	14	34	31	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3062518-3063909	Cluster_1147	Pocillopora_meandrina_HIv1___Sc0000003	3062518	3063909	1392	2354	707	0.15590484282073067	-	UGAAGAACAGAAUAUGGGUAGUCCAUGG	177	17	2161	20	8	39	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3187005-3187432	Cluster_1148	Pocillopora_meandrina_HIv1___Sc0000003	3187005	3187432	428	72	16	0.027777777777777776	-	CGAUCCAACAAGAACAAUAUGUGCUGACU	22	0	72	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3212023-3212452	Cluster_1149	Pocillopora_meandrina_HIv1___Sc0000003	3212023	3212452	430	182	52	0.07692307692307693	-	UCAGGCCAUGACUCUACAUCUGCUAGUAGC	38	0	167	0	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3214046-3214562	Cluster_1150	Pocillopora_meandrina_HIv1___Sc0000003	3214046	3214562	517	302	80	0.6026490066225165	.	AGAAAUACUAGCUGUUCAACUCAACAA	69	8	278	5	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3216169-3216596	Cluster_1151	Pocillopora_meandrina_HIv1___Sc0000003	3216169	3216596	428	82	23	0.0	-	UUAUUUCCUUGUAUUUCUUUAGAACUUGUA	20	0	81	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3221779-3222319	Cluster_1152	Pocillopora_meandrina_HIv1___Sc0000003	3221779	3222319	541	503	162	0.8031809145129225	+	UCGAUGUUACUGUCCGUUCUCCGUUGA	81	6	421	10	9	38	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3228849-3229281	Cluster_1153	Pocillopora_meandrina_HIv1___Sc0000003	3228849	3229281	433	804	86	0.9987562189054726	+	CUUGGAAGUGUUAUCUGCCGGUCGGCCUUU	395	8	771	5	5	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3303172-3303600	Cluster_1154	Pocillopora_meandrina_HIv1___Sc0000003	3303172	3303600	429	1783	72	0.0	-	CGAUCCAACAAGAACAAUAUGUGCUGACU	1422	0	1773	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3347350-3347835	Cluster_1155	Pocillopora_meandrina_HIv1___Sc0000003	3347350	3347835	486	169	71	0.4260355029585799	.	UGUACUGUUUGUAUUUUUUUUCCUGGGC	20	3	154	0	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3438712-3439139	Cluster_1156	Pocillopora_meandrina_HIv1___Sc0000003	3438712	3439139	428	164	61	0.975609756097561	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	45	2	156	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3439687-3440217	Cluster_1157	Pocillopora_meandrina_HIv1___Sc0000003	3439687	3440217	531	390	138	0.8358974358974359	+	UGUUGGCUGCAUUCUUUUAAAAGACGU	48	8	321	1	5	25	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3758358-3758770	Cluster_1158	Pocillopora_meandrina_HIv1___Sc0000003	3758358	3758770	413	130	91	0.007692307692307693	-	CGUCUGCAUCCUCGAGCA	5	34	51	13	15	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3760949-3761352	Cluster_1159	Pocillopora_meandrina_HIv1___Sc0000003	3760949	3761352	404	107	68	0.0	-	CAUGCAGAUCUUUGUCAAAACCCU	7	38	34	8	6	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3989630-3990139	Cluster_1160	Pocillopora_meandrina_HIv1___Sc0000003	3989630	3990139	510	328	137	0.2621951219512195	.	UUGUGGUUCAAUGGGAAAACGAGAACA	31	12	200	4	9	17	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3990736-3991161	Cluster_1161	Pocillopora_meandrina_HIv1___Sc0000003	3990736	3991161	426	77	17	0.0	-	UGAAACUCUGAUCUGAAAAUAUUUUU	37	0	75	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4427878-4428306	Cluster_1162	Pocillopora_meandrina_HIv1___Sc0000003	4427878	4428306	429	175	57	0.05142857142857143	-	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	55	9	155	3	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4502940-4503367	Cluster_1163	Pocillopora_meandrina_HIv1___Sc0000003	4502940	4503367	428	159	57	0.9371069182389937	+	UUAAAUGGCUUGUAAUGACUAAUAAACA	31	0	157	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4503526-4504274	Cluster_1164	Pocillopora_meandrina_HIv1___Sc0000003	4503526	4504274	749	1066	410	0.6941838649155723	.	CUACAGAAAAUACAAACCGAUUGU	49	8	935	2	10	9	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4505325-4506571	Cluster_1165	Pocillopora_meandrina_HIv1___Sc0000003	4505325	4506571	1247	5265	1057	0.8484330484330485	+	UCCGUGUCAACAUAUUGUAUUUCAAAGU	564	19	4906	15	54	122	149	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4619797-4620224	Cluster_1166	Pocillopora_meandrina_HIv1___Sc0000003	4619797	4620224	428	154	49	0.006493506493506494	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	50	4	144	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4842828-4843448	Cluster_1167	Pocillopora_meandrina_HIv1___Sc0000003	4842828	4843448	621	483	148	0.026915113871635612	-	UGAUAAUGUUUGAAAGCUGUUGCUGUUC	108	2	470	1	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4944793-4945213	Cluster_1168	Pocillopora_meandrina_HIv1___Sc0000003	4944793	4945213	421	124	49	0.03225806451612903	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	25	0	122	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4945307-4945849	Cluster_1169	Pocillopora_meandrina_HIv1___Sc0000003	4945307	4945849	543	592	224	0.1554054054054054	-	UGAAAAACCUUCCACGUCAAUCUGGCUCAGA	72	0	558	4	5	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4946513-4946940	Cluster_1170	Pocillopora_meandrina_HIv1___Sc0000003	4946513	4946940	428	197	73	0.01015228426395939	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	36	7	182	1	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5028952-5029429	Cluster_1171	Pocillopora_meandrina_HIv1___Sc0000003	5028952	5029429	478	800	207	0.0	-	CUAGAUAGUAUCUGACACUG	66	165	428	35	34	69	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5030876-5031354	Cluster_1172	Pocillopora_meandrina_HIv1___Sc0000003	5030876	5031354	479	1637	410	0.0	-	AGUGAAUGAUGUAAAAUUCUGGGUUGCA	126	426	852	119	53	105	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5148334-5148807	Cluster_1173	Pocillopora_meandrina_HIv1___Sc0000003	5148334	5148807	474	339	123	0.0	-	GUGGCUCGUAAUUUUGACUCAAAUAUGG	96	45	238	8	11	10	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5182536-5182959	Cluster_1174	Pocillopora_meandrina_HIv1___Sc0000003	5182536	5182959	424	228	161	0.9956140350877193	+	GUUGUUUACUGACUGGAUGAUAGCUGU	11	36	114	22	18	16	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5372310-5372735	Cluster_1175	Pocillopora_meandrina_HIv1___Sc0000003	5372310	5372735	426	288	118	0.84375	+	UGUGAAUCUUUUUACUCGUUAUGUUA	44	9	259	10	7	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5692287-5693120	Cluster_1176	Pocillopora_meandrina_HIv1___Sc0000003	5692287	5693120	834	554	220	0.9404332129963899	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	50	3	536	2	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5694637-5695065	Cluster_1177	Pocillopora_meandrina_HIv1___Sc0000003	5694637	5695065	429	211	117	0.21800947867298578	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	15	2	195	0	2	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5755579-5756010	Cluster_1178	Pocillopora_meandrina_HIv1___Sc0000003	5755579	5756010	432	416	89	1.0	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	65	1	414	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5760139-5760610	Cluster_1179	Pocillopora_meandrina_HIv1___Sc0000003	5760139	5760610	472	67126	920	0.0	-	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	28619	1172	65637	82	42	77	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5831350-5831779	Cluster_1180	Pocillopora_meandrina_HIv1___Sc0000003	5831350	5831779	430	96	18	1.0	+	UUAUGAGUGAACCUUUCAUCGAGAAACAUG	58	0	96	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5911110-5911540	Cluster_1181	Pocillopora_meandrina_HIv1___Sc0000003	5911110	5911540	431	2529	143	0.9956504547251879	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCA	669	3	2519	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5965071-5965586	Cluster_1182	Pocillopora_meandrina_HIv1___Sc0000003	5965071	5965586	516	386	215	0.0	-	CUCCGUCUGUGGUGAGCA	22	86	189	35	29	21	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5965723-5966238	Cluster_1183	Pocillopora_meandrina_HIv1___Sc0000003	5965723	5966238	516	373	255	0.002680965147453083	-	ACAACUCGGGCGAGAUUCA	23	115	121	42	32	39	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6019954-6020383	Cluster_1184	Pocillopora_meandrina_HIv1___Sc0000003	6019954	6020383	430	219	144	0.9817351598173516	+	GAAGAUUGCGGGUUCGAGUCCCGUCGGAGGU	7	92	77	19	11	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6328548-6328949	Cluster_1185	Pocillopora_meandrina_HIv1___Sc0000003	6328548	6328949	402	143	102	1.0	+	AGACGAGUGAGAGAAAAGACA	6	28	69	16	11	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6386367-6386828	Cluster_1186	Pocillopora_meandrina_HIv1___Sc0000003	6386367	6386828	462	463	283	0.0021598272138228943	-	UCUGUUGUGUCUGAAAGGCUGA	15	125	137	51	60	44	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6424799-6425229	Cluster_1187	Pocillopora_meandrina_HIv1___Sc0000003	6424799	6425229	431	541	64	1.0	+	UGACAAUCAUGCUGCUAAGUUCCUACGC	140	0	537	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6569728-6570155	Cluster_1188	Pocillopora_meandrina_HIv1___Sc0000003	6569728	6570155	428	197	68	0.005076142131979695	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	39	5	189	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6670538-6670966	Cluster_1189	Pocillopora_meandrina_HIv1___Sc0000003	6670538	6670966	429	244	61	0.9180327868852459	+	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	47	51	170	17	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6672454-6672913	Cluster_1190	Pocillopora_meandrina_HIv1___Sc0000003	6672454	6672913	460	1100	181	0.9918181818181818	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	451	40	1018	7	13	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6767976-6768388	Cluster_1191	Pocillopora_meandrina_HIv1___Sc0000003	6767976	6768388	413	174	133	0.0	-	GUGACGUGUGAAUGCCAAACCGGUGAAUA	5	32	86	14	11	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6774529-6774948	Cluster_1192	Pocillopora_meandrina_HIv1___Sc0000003	6774529	6774948	420	167	102	0.0	-	CGGAACGGAACAUGUUUGUU	14	26	71	18	14	29	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6775676-6776091	Cluster_1193	Pocillopora_meandrina_HIv1___Sc0000003	6775676	6776091	416	91	49	0.0	-	GCGGUUCAGAGAAGUAGACA	9	24	23	5	16	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6885701-6886302	Cluster_1194	Pocillopora_meandrina_HIv1___Sc0000003	6885701	6886302	602	691	387	0.7612156295224313	.	CGGCUAUAAUGGGAAACCCUGU	29	312	110	110	88	46	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6910359-6911008	Cluster_1195	Pocillopora_meandrina_HIv1___Sc0000003	6910359	6911008	650	350	161	0.9314285714285714	+	UCUACUUCGGAGCCUAGACGU	17	129	108	63	12	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6988889-6989345	Cluster_1196	Pocillopora_meandrina_HIv1___Sc0000003	6988889	6989345	457	203	89	0.8866995073891626	+	UAUAAAGAUGUUCAUCGGCCCAGUGGCGUGA	21	3	176	0	2	1	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7133223-7133650	Cluster_1197	Pocillopora_meandrina_HIv1___Sc0000003	7133223	7133650	428	199	81	0.005025125628140704	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	34	2	189	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7244498-7244925	Cluster_1198	Pocillopora_meandrina_HIv1___Sc0000003	7244498	7244925	428	255	91	0.9529411764705882	+	UACAAACAACAGAACGUUCGAACGGCU	38	7	234	3	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7299311-7299716	Cluster_1199	Pocillopora_meandrina_HIv1___Sc0000003	7299311	7299716	406	164	131	0.024390243902439025	-	GAUGUGAACUUAGACUCCCUAGAU	5	29	74	16	9	17	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7299821-7300240	Cluster_1200	Pocillopora_meandrina_HIv1___Sc0000003	7299821	7300240	420	386	277	0.0	-	CGUUUGUUGGUCCCUCAAAGGUU	7	88	159	42	32	25	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7300249-7300656	Cluster_1201	Pocillopora_meandrina_HIv1___Sc0000003	7300249	7300656	408	230	159	0.0	-	UAACGCAAGUAGAAUAGA	11	55	100	16	17	13	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7353741-7354272	Cluster_1202	Pocillopora_meandrina_HIv1___Sc0000003	7353741	7354272	532	358	244	1.0	+	CUUUCGGCUUCCUCAGGA	12	115	160	21	29	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7408170-7409498	Cluster_1203	Pocillopora_meandrina_HIv1___Sc0000003	7408170	7409498	1329	1750	1158	0.002285714285714286	-	GAUACUGCUAGUUUUGUUACA	15	395	790	141	150	121	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7409540-7409952	Cluster_1204	Pocillopora_meandrina_HIv1___Sc0000003	7409540	7409952	413	184	127	0.0	-	CAUGGACUUCCAGGAAGAUU	5	60	59	16	11	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7410474-7410907	Cluster_1205	Pocillopora_meandrina_HIv1___Sc0000003	7410474	7410907	434	415	285	0.0	-	CAUCUGUGUGUGUUGAGAAAAACU	12	107	173	32	37	38	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7411420-7411846	Cluster_1206	Pocillopora_meandrina_HIv1___Sc0000003	7411420	7411846	427	301	222	0.0	-	UUUAGAGGCUGAACUGGACGAGCCACU	8	60	138	26	24	28	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7412367-7413218	Cluster_1207	Pocillopora_meandrina_HIv1___Sc0000003	7412367	7413218	852	848	547	0.007075471698113208	-	UUAACGAUCGACUCGUCUUGUUGCCA	8	150	388	62	84	68	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7562320-7562747	Cluster_1208	Pocillopora_meandrina_HIv1___Sc0000003	7562320	7562747	428	89	13	0.02247191011235955	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	0	88	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7599791-7601072	Cluster_1209	Pocillopora_meandrina_HIv1___Sc0000003	7599791	7601072	1282	2864	894	0.5160614525139665	.	UUGGAUCCAUUUACACUUUGUAAUCUGUG	200	45	2578	45	20	41	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7622721-7623130	Cluster_1210	Pocillopora_meandrina_HIv1___Sc0000003	7622721	7623130	410	138	59	0.2826086956521739	.	UAAAUCCACCACAGUCCAUAAAUUUGUCAGA	19	0	121	3	2	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7626252-7626678	Cluster_1211	Pocillopora_meandrina_HIv1___Sc0000003	7626252	7626678	427	208	108	0.9615384615384616	+	UUUGACUGUGUUCCGCCUGUUAUUGUC	16	8	188	2	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7633872-7634300	Cluster_1212	Pocillopora_meandrina_HIv1___Sc0000003	7633872	7634300	429	205	64	0.9365853658536586	+	UAAGAUAUCGUUAACAACUCGAAGAAGCG	42	0	202	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7659437-7659861	Cluster_1213	Pocillopora_meandrina_HIv1___Sc0000003	7659437	7659861	425	134	43	0.9850746268656716	+	AAGAUAACCAAUGAAUUCAGCUAAAAAGA	23	3	92	4	2	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7947458-7947877	Cluster_1214	Pocillopora_meandrina_HIv1___Sc0000003	7947458	7947877	420	266	152	0.0	-	GUUAAGGUUAAGAGCUCCA	25	93	133	9	14	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7948713-7949136	Cluster_1215	Pocillopora_meandrina_HIv1___Sc0000003	7948713	7949136	424	346	255	0.002890173410404624	-	AAUCGAGCUAGACGAUGCCAAGAGGGCUCU	6	57	149	35	32	32	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7955162-7955577	Cluster_1216	Pocillopora_meandrina_HIv1___Sc0000003	7955162	7955577	416	280	194	0.0035714285714285713	-	GGAGGAGAUCUUGAACCUGCA	39	60	94	60	20	31	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8175305-8175722	Cluster_1217	Pocillopora_meandrina_HIv1___Sc0000003	8175305	8175722	418	92	10	1.0	+	GCUACUUUGACCUCAUUUA	39	90	0	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8251830-8252248	Cluster_1218	Pocillopora_meandrina_HIv1___Sc0000003	8251830	8252248	419	72	22	0.9861111111111112	+	GUGGUGAUGAACUUUGAGA	13	24	25	8	3	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8266188-8266656	Cluster_1219	Pocillopora_meandrina_HIv1___Sc0000003	8266188	8266656	469	507	195	0.0	-	CGGCUGUUAACCGAAAGGUUGGU	48	158	103	41	58	105	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8314379-8314796	Cluster_1220	Pocillopora_meandrina_HIv1___Sc0000003	8314379	8314796	418	1161	8	0.9991386735572783	+	UUUGUAGGCUCUAACAGC	1140	1160	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8365220-8365649	Cluster_1221	Pocillopora_meandrina_HIv1___Sc0000003	8365220	8365649	430	213	76	1.0	+	UCUUGAAGCCUUAUCUGCUAGUUUACCUG	45	28	167	8	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8389908-8390326	Cluster_1222	Pocillopora_meandrina_HIv1___Sc0000003	8389908	8390326	419	154	113	1.0	+	CUCGGUGAUCUAGAAACGUAAAAA	6	37	78	6	12	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8391648-8392053	Cluster_1223	Pocillopora_meandrina_HIv1___Sc0000003	8391648	8392053	406	219	171	0.9954337899543378	+	UCUUUGAAGAUUUUCAGGAUGAAGGAUA	7	59	100	14	9	24	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8392372-8393246	Cluster_1224	Pocillopora_meandrina_HIv1___Sc0000003	8392372	8393246	875	1233	728	0.9927007299270073	+	UGAAGACUUUGCAGAAGAUUCUGUCUGUGGA	25	296	554	115	112	86	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8442393-8443321	Cluster_1225	Pocillopora_meandrina_HIv1___Sc0000003	8442393	8443321	929	6760	461	0.45059171597633135	.	UCUUGAACCAAUCUACGACAGACUGAGU	1823	36	6542	47	9	29	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8459705-8460134	Cluster_1226	Pocillopora_meandrina_HIv1___Sc0000003	8459705	8460134	430	650	139	0.9907692307692307	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	144	0	646	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8619931-8620351	Cluster_1227	Pocillopora_meandrina_HIv1___Sc0000003	8619931	8620351	421	160	94	0.475	.	UUCCGCGUCGAUUGUGUCCAUU	16	73	7	48	26	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8622404-8623297	Cluster_1228	Pocillopora_meandrina_HIv1___Sc0000003	8622404	8623297	894	523	257	0.390057361376673	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	47	50	412	12	6	17	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8648200-8648635	Cluster_1229	Pocillopora_meandrina_HIv1___Sc0000003	8648200	8648635	436	464	198	0.1724137931034483	-	UAUGACGUUCCAGAAUCUUUGACAAAA	35	2	441	3	4	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8649170-8649599	Cluster_1230	Pocillopora_meandrina_HIv1___Sc0000003	8649170	8649599	430	147	52	0.02040816326530612	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	25	2	142	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8658110-8658528	Cluster_1231	Pocillopora_meandrina_HIv1___Sc0000003	8658110	8658528	419	1824	20	1.0	+	AAUCGGCCGUGGAUUGGU	1523	1822	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8680823-8681250	Cluster_1232	Pocillopora_meandrina_HIv1___Sc0000003	8680823	8681250	428	203	96	0.03940886699507389	-	UGACGUCCAAACGAGCCUGAUCUUGAUG	14	0	199	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8682415-8682830	Cluster_1233	Pocillopora_meandrina_HIv1___Sc0000003	8682415	8682830	416	223	124	0.013452914798206279	-	UGCUUCGCUAAAAUUACUCUCCUCUUGAGC	11	7	209	0	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8695585-8696014	Cluster_1234	Pocillopora_meandrina_HIv1___Sc0000003	8695585	8696014	430	819	66	0.9987789987789988	+	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	444	2	816	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8780641-8782378	Cluster_1235	Pocillopora_meandrina_HIv1___Sc0000003	8780641	8782378	1738	2812	1110	0.9630156472261735	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	88	19	2674	8	22	47	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8905394-8905822	Cluster_1236	Pocillopora_meandrina_HIv1___Sc0000003	8905394	8905822	429	173	50	0.9884393063583815	+	UUCCUGCAUCUGUUGAGCCUUCUGACAGU	30	2	168	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8907631-8908059	Cluster_1237	Pocillopora_meandrina_HIv1___Sc0000003	8907631	8908059	429	165	55	1.0	+	UAGGUUCUUGUGGAACAACCAGUUGUGCA	50	0	161	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8915298-8915727	Cluster_1238	Pocillopora_meandrina_HIv1___Sc0000003	8915298	8915727	430	243	69	0.9506172839506173	+	CGAAUUCCAAACACCGAACCGCUUUUUGUG	36	5	226	0	4	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8916613-8917186	Cluster_1239	Pocillopora_meandrina_HIv1___Sc0000003	8916613	8917186	574	388	170	0.21391752577319587	.	UAUCUAUGGCUGACUAUGUCAGUGUCUCU	31	15	345	7	3	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8920685-8921364	Cluster_1240	Pocillopora_meandrina_HIv1___Sc0000003	8920685	8921364	680	3455	439	0.9111432706222865	+	UAAGACCCAUCCAUUGCUAUCAAUUCGC	464	21	3230	32	13	33	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8969736-8970166	Cluster_1241	Pocillopora_meandrina_HIv1___Sc0000003	8969736	8970166	431	282	109	0.04609929078014184	-	UGAAGAUUCUCAAAGGUUGCUGAUAACUGGC	27	4	267	0	5	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9071829-9072246	Cluster_1242	Pocillopora_meandrina_HIv1___Sc0000003	9071829	9072246	418	566	14	0.0	-	GACUUGAAGCGGUUGGAA	478	566	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9149634-9150115	Cluster_1243	Pocillopora_meandrina_HIv1___Sc0000003	9149634	9150115	482	592	183	0.875	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	56	13	345	16	6	71	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9291034-9292771	Cluster_1244	Pocillopora_meandrina_HIv1___Sc0000003	9291034	9292771	1738	2754	1083	0.958242556281772	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	96	25	2612	13	22	38	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9403760-9404177	Cluster_1245	Pocillopora_meandrina_HIv1___Sc0000003	9403760	9404177	418	348	17	0.0	-	AAUCGGCCGUGGAUUUGU	283	347	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9565787-9566383	Cluster_1246	Pocillopora_meandrina_HIv1___Sc0000003	9565787	9566383	597	5560	488	0.9964028776978417	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	866	5	5506	5	2	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9657566-9657995	Cluster_1247	Pocillopora_meandrina_HIv1___Sc0000003	9657566	9657995	430	375	102	0.9386666666666666	+	UGAGUGAGAUAAAUGAAAACCUUUGGAGA	48	0	361	0	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9699669-9700425	Cluster_1248	Pocillopora_meandrina_HIv1___Sc0000003	9699669	9700425	757	1527	302	0.9148657498362803	+	UGAGUGAGAUAAAUGAAAACCUUUGGAGA	72	34	1349	10	12	25	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9709235-9709736	Cluster_1249	Pocillopora_meandrina_HIv1___Sc0000003	9709235	9709736	502	3708	246	0.9911003236245954	+	UGGAACAACCUUUCGACUGACGAUCUC	796	15	3634	7	32	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9744415-9744843	Cluster_1250	Pocillopora_meandrina_HIv1___Sc0000003	9744415	9744843	429	261	126	0.38697318007662834	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	57	21	218	1	4	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9751847-9752327	Cluster_1251	Pocillopora_meandrina_HIv1___Sc0000003	9751847	9752327	481	6322	277	0.999683644416324	+	UGUAUCGAUGUAAUCUCUCCAGUUUGUGUU	1673	49	6221	4	3	6	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9758869-9759298	Cluster_1252	Pocillopora_meandrina_HIv1___Sc0000003	9758869	9759298	430	938	164	0.0	-	UACAUGUCUCGGGGUAGCCGAUCUCGGA	257	12	922	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9759467-9759872	Cluster_1253	Pocillopora_meandrina_HIv1___Sc0000003	9759467	9759872	406	337	120	0.002967359050445104	-	UGCGAACGGUAGAUUUAUGAUGAAAUGCAU	26	9	315	2	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9762294-9762707	Cluster_1254	Pocillopora_meandrina_HIv1___Sc0000003	9762294	9762707	414	109	63	0.6972477064220184	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	17	1	89	2	4	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9768332-9768759	Cluster_1255	Pocillopora_meandrina_HIv1___Sc0000003	9768332	9768759	428	120	47	0.016666666666666666	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	41	4	115	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9777948-9778366	Cluster_1256	Pocillopora_meandrina_HIv1___Sc0000003	9777948	9778366	419	92	45	0.11956521739130435	-	GUACACAAUAUUGGCCAAGAUUCUGAAA	14	0	80	3	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9784035-9784462	Cluster_1257	Pocillopora_meandrina_HIv1___Sc0000003	9784035	9784462	428	93	22	0.956989247311828	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	62	0	90	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9784980-9785407	Cluster_1258	Pocillopora_meandrina_HIv1___Sc0000003	9784980	9785407	428	101	22	0.9801980198019802	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	32	0	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9795699-9796507	Cluster_1259	Pocillopora_meandrina_HIv1___Sc0000003	9795699	9796507	809	14728	847	0.0014258555133079848	-	UCGAAGACUCUAGACGGCGGAAGCCUCUUU	2362	55	14557	23	27	15	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9799378-9799799	Cluster_1260	Pocillopora_meandrina_HIv1___Sc0000003	9799378	9799799	422	128	62	0.9609375	+	UCUCUCUGUUUUGGUCUCGCCAUGGAAC	19	0	121	0	1	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9800889-9801314	Cluster_1261	Pocillopora_meandrina_HIv1___Sc0000003	9800889	9801314	426	119	70	0.8487394957983193	+	UGUAUUGAUUGAACUUGUCGGUUGACC	11	2	105	1	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9802655-9803059	Cluster_1262	Pocillopora_meandrina_HIv1___Sc0000003	9802655	9803059	405	130	75	0.8461538461538461	+	UGCUUGUGACUUAAGUUGUCGUUCUUCU	10	0	120	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9807539-9807963	Cluster_1263	Pocillopora_meandrina_HIv1___Sc0000003	9807539	9807963	425	110	47	0.0	-	UUGUGCUGUUCUGUUUCUGCCAAUAGC	20	0	107	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9810528-9811478	Cluster_1264	Pocillopora_meandrina_HIv1___Sc0000003	9810528	9811478	951	55267	1305	0.00014475184106247852	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	15278	27	55097	15	26	23	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9829639-9830066	Cluster_1265	Pocillopora_meandrina_HIv1___Sc0000003	9829639	9830066	428	158	58	0.012658227848101266	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	54	0	158	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9840509-9840938	Cluster_1266	Pocillopora_meandrina_HIv1___Sc0000003	9840509	9840938	430	121	25	0.9752066115702479	+	UGUGUACUUUUGGUAGGUGGUAAUCAAAGU	83	0	120	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9842981-9843409	Cluster_1267	Pocillopora_meandrina_HIv1___Sc0000003	9842981	9843409	429	134	41	0.007462686567164179	-	UUGGAAUUCGAAGCAAGUAACAACCGACA	19	0	131	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9872204-9873180	Cluster_1268	Pocillopora_meandrina_HIv1___Sc0000003	9872204	9873180	977	2079	387	0.001443001443001443	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	399	4	2071	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9891466-9891893	Cluster_1269	Pocillopora_meandrina_HIv1___Sc0000003	9891466	9891893	428	160	51	0.025	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	43	1	156	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9902335-9902764	Cluster_1270	Pocillopora_meandrina_HIv1___Sc0000003	9902335	9902764	430	133	31	0.9624060150375939	+	UGUGUACUUUUGGUAGGUGGUAAUCAAAGU	77	0	131	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9904808-9905234	Cluster_1271	Pocillopora_meandrina_HIv1___Sc0000003	9904808	9905234	427	101	33	0.0	-	UUGGAAUUCGAAGCAAGUAACAACCGACA	17	0	100	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9912132-9912559	Cluster_1272	Pocillopora_meandrina_HIv1___Sc0000003	9912132	9912559	428	93	25	0.956989247311828	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	50	0	92	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9920702-9921127	Cluster_1273	Pocillopora_meandrina_HIv1___Sc0000003	9920702	9921127	426	114	26	0.05263157894736842	-	CGCUACAACAAGAUGUGAGUACUGUG	35	0	110	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9932440-9933391	Cluster_1274	Pocillopora_meandrina_HIv1___Sc0000003	9932440	9933391	952	2061	379	0.0	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	368	1	2054	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9935602-9936183	Cluster_1275	Pocillopora_meandrina_HIv1___Sc0000003	9935602	9936183	582	704	279	0.7173295454545454	.	UGGAAAGUUGUAAAAUUAAGGCUGUACGG	33	6	630	3	4	14	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9944352-9944779	Cluster_1276	Pocillopora_meandrina_HIv1___Sc0000003	9944352	9944779	428	124	45	0.03225806451612903	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	43	1	122	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9973243-9973662	Cluster_1277	Pocillopora_meandrina_HIv1___Sc0000003	9973243	9973662	420	128	76	0.171875	-	AGCCGAGCUCGAUUCAUGUUC	8	65	2	48	9	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9987992-9988421	Cluster_1278	Pocillopora_meandrina_HIv1___Sc0000003	9987992	9988421	430	356	75	0.8960674157303371	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	140	7	338	5	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9994432-9994839	Cluster_1279	Pocillopora_meandrina_HIv1___Sc0000003	9994432	9994839	408	68	23	0.8823529411764706	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	38	0	65	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10001373-10002717	Cluster_1280	Pocillopora_meandrina_HIv1___Sc0000003	10001373	10002717	1345	38717	2246	0.0009039956608208281	-	UGAGCGUACGGUUUAAUGUGUUGAUGACGU	4364	141	38202	45	119	102	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10010816-10011902	Cluster_1281	Pocillopora_meandrina_HIv1___Sc0000003	10010816	10011902	1087	8710	729	0.000574052812858783	-	UGUAUCGAUGUAAUCUCUCCAGUUUGUGUU	1571	82	8557	7	5	18	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10012444-10012874	Cluster_1282	Pocillopora_meandrina_HIv1___Sc0000003	10012444	10012874	431	273	79	0.0	-	UUUAUCGUCAUUUGUGCUGAAAAUGGACA	37	1	269	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10014241-10014661	Cluster_1283	Pocillopora_meandrina_HIv1___Sc0000003	10014241	10014661	421	115	62	0.7478260869565218	.	UGUGAGCGAAAACGACCGUGAAACGAACG	10	1	102	1	5	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10064345-10065144	Cluster_1284	Pocillopora_meandrina_HIv1___Sc0000003	10064345	10065144	800	2328	259	0.9484536082474226	+	UCGAAGACUCUAGACGGCGGAAGCCUCUUC	798	38	2217	18	3	13	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10079764-10080571	Cluster_1285	Pocillopora_meandrina_HIv1___Sc0000003	10079764	10080571	808	40177	589	0.9979341414241979	+	UGGAACAACCUUUCGACUGACGAUCUCACC	17387	51	39978	15	63	35	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10095245-10095670	Cluster_1286	Pocillopora_meandrina_HIv1___Sc0000003	10095245	10095670	426	104	45	0.16346153846153846	-	UGAGUGAGAUAAAUGAAUACCUUUGGAGA	8	4	99	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10129514-10129606	Cluster_1287	Pocillopora_meandrina_HIv1___Sc0000003	10129514	10129606	93	11292	233	0.00017711654268508679	-	CGAUGUACUUCAGAGCAAUUUUU	2869	397	119	3756	240	5015	1765	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000003:10217881-10218294	Cluster_1288	Pocillopora_meandrina_HIv1___Sc0000003	10217881	10218294	414	117	73	0.02564102564102564	-	UGCUCAUAUCUAAUAGAACUACUGCCGUU	15	0	111	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10254529-10255385	Cluster_1289	Pocillopora_meandrina_HIv1___Sc0000003	10254529	10255385	857	713	361	0.664796633941094	.	UCUAACGGAUACAGCUGCUGUACUGCU	34	17	603	8	15	30	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10257231-10258204	Cluster_1290	Pocillopora_meandrina_HIv1___Sc0000003	10257231	10258204	974	3143	641	0.24117085587018772	.	CGUGUACGACGCCUCUGCCCGAGCUUCAGA	904	18	3012	21	16	33	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10258826-10259455	Cluster_1291	Pocillopora_meandrina_HIv1___Sc0000003	10258826	10259455	630	418	193	0.5430622009569378	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	66	7	391	2	2	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10343590-10344134	Cluster_1292	Pocillopora_meandrina_HIv1___Sc0000003	10343590	10344134	545	553	92	0.9981916817359855	+	GCUUUGCAUGGAACAAUG	265	386	141	7	11	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10366033-10366130	Cluster_1293	Pocillopora_meandrina_HIv1___Sc0000003	10366033	10366130	98	858857	595	0.9999708915453911	+	ACCCGUAGAUCCGAACUUGU	302900	453621	35	21036	380606	3365	194	N	Y	hsa-miR-100-5p;mmu-miR-100-5p;rno-miR-100-5p;gga-miR-100-5p;aga-miR-100;dre-miR-100-5p;lla-miR-100;ggo-miR-100;age-miR-100;ppa-miR-100;ppy-miR-100;ptr-miR-100;mml-miR-100-5p;sla-miR-100;tni-miR-100;fru-miR-100;xtr-miR-100;mdo-miR-100-5p;ame-miR-100-5p;oan-miR-100-5p;tca-miR-100-5p;bta-miR-100;lgi-miR-100;sko-miR-100;bmo-miR-100;eca-miR-100;ssc-miR-100;bma-miR-100b;aae-miR-100;cqu-miR-100-5p;tgu-miR-100-5p;nvi-miR-100;pma-miR-100a-5p;aca-miR-100;ola-miR-100;sha-miR-100;cgr-miR-100-5p;mse-miR-100;ccr-miR-100;ipu-miR-100;pmi-miR-100-5p;bbe-miR-100-5p;ssa-miR-100a-5p;cpi-miR-100-5p;ami-miR-100-5p;cli-miR-100-5p;pbv-miR-100-5p;chi-miR-100-5p;tch-miR-100-5p;pal-miR-100-5p;tcf-miR-100;abu-miR-100;mze-miR-100;nbr-miR-100;oni-miR-100;pny-miR-100;gmo-miR-100a-5p;pte-miR-100b-5p;xla-miR-100-5p;cpo-miR-100-5p;dno-miR-100-5p;ocu-miR-100-5p;mmr-miR-100;cja-miR-100;dma-miR-100;nle-miR-100;pha-miR-100;sbo-miR-100;oga-miR-100;dqu-miR-100-5p;pca-miR-100-5p
Pocillopora_meandrina_HIv1___Sc0000003:10467440-10467869	Cluster_1294	Pocillopora_meandrina_HIv1___Sc0000003	10467440	10467869	430	157	36	0.12101910828025478	-	UUACAACGGGGACUAGCUCCGAUCUCUCUU	23	19	137	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10524991-10525416	Cluster_1295	Pocillopora_meandrina_HIv1___Sc0000003	10524991	10525416	426	101	38	0.039603960396039604	-	UGUGUAGAUAUGUCUUUUGGACAGGA	22	0	100	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10659509-10659936	Cluster_1296	Pocillopora_meandrina_HIv1___Sc0000003	10659509	10659936	428	160	65	0.93125	+	UCAACAUUCUUAAUGUCACAUGGCACUCUUC	23	0	152	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10771888-10772322	Cluster_1297	Pocillopora_meandrina_HIv1___Sc0000003	10771888	10772322	435	441	169	0.8594104308390023	+	UAUCACUUCAUAUUCGGAUAUCCAUUGC	39	11	385	4	3	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10853900-10854328	Cluster_1298	Pocillopora_meandrina_HIv1___Sc0000003	10853900	10854328	429	282	111	0.30141843971631205	.	AAGUUUUCCAACGACUCGUUUCUCUGCG	69	9	255	2	7	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10898397-10898826	Cluster_1299	Pocillopora_meandrina_HIv1___Sc0000003	10898397	10898826	430	98	25	1.0	+	UGAGAUGGAUUUGAAUGACUGUAAGGUUUAC	24	4	77	2	8	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10984913-10985340	Cluster_1300	Pocillopora_meandrina_HIv1___Sc0000003	10984913	10985340	428	179	93	0.13966480446927373	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	20	3	161	4	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11272564-11273266	Cluster_1301	Pocillopora_meandrina_HIv1___Sc0000003	11272564	11273266	703	463	198	0.9956803455723542	+	UAGGCACUCUUCUGUUUCCAGGUUUGGUA	56	7	437	6	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11273554-11274023	Cluster_1302	Pocillopora_meandrina_HIv1___Sc0000003	11273554	11274023	470	448	154	1.0	+	UGCGACUCCGAGCACUUUCUGCACAAGUU	63	3	432	0	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11275061-11275491	Cluster_1303	Pocillopora_meandrina_HIv1___Sc0000003	11275061	11275491	431	2706	192	1.0	+	UCGUAGACUUCCGUCCUUAUUGUUUGGUA	1160	1	2656	2	13	8	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11276324-11276792	Cluster_1304	Pocillopora_meandrina_HIv1___Sc0000003	11276324	11276792	469	452	110	1.0	+	UGUACAUUGAAGCGCAGUUGUUUGUAGAACA	74	5	440	3	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11282947-11283364	Cluster_1305	Pocillopora_meandrina_HIv1___Sc0000003	11282947	11283364	418	178	24	1.0	+	AUCCCACUCCUGACACCG	110	170	7	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11284624-11285051	Cluster_1306	Pocillopora_meandrina_HIv1___Sc0000003	11284624	11285051	428	108	45	1.0	+	UUGGUAGACACUGCACAGUGGAUCUGGC	38	3	100	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11286345-11286753	Cluster_1307	Pocillopora_meandrina_HIv1___Sc0000003	11286345	11286753	409	214	98	1.0	+	UGAUCCCUCUGAAUUUCUGGAAGAUGUUUG	14	1	206	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11288132-11288615	Cluster_1308	Pocillopora_meandrina_HIv1___Sc0000003	11288132	11288615	484	561	185	1.0	+	UAAACAUCUUCUGUCUGAUAGCAAACGGC	62	4	554	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11289719-11290158	Cluster_1309	Pocillopora_meandrina_HIv1___Sc0000003	11289719	11290158	440	245	45	0.42857142857142855	.	UACCGUAGAACUUUCCAGAACAUUUCAUU	102	0	234	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11295745-11296301	Cluster_1310	Pocillopora_meandrina_HIv1___Sc0000003	11295745	11296301	557	2394	416	0.9678362573099415	+	UAAUGAAGUCGUAAUUUGUCCAUCC	815	15	2241	3	78	22	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11296950-11298718	Cluster_1311	Pocillopora_meandrina_HIv1___Sc0000003	11296950	11298718	1769	3917	1317	0.9588971151391371	+	UCAGAAAGAAUCUCUUGAAGUUGUGGUA	96	19	3735	11	26	54	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11304922-11305468	Cluster_1312	Pocillopora_meandrina_HIv1___Sc0000003	11304922	11305468	547	5808	461	0.9516184573002755	+	UGAAAUCUUCUUGCUCUUUGUAAUCUGA	2854	27	5588	35	25	74	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11310298-11312559	Cluster_1313	Pocillopora_meandrina_HIv1___Sc0000003	11310298	11312559	2262	6790	2103	0.9086892488954345	+	UAUGUACGAUUUUAACUGGAAGAAACGUU	194	142	6273	34	40	122	179	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11313832-11314259	Cluster_1314	Pocillopora_meandrina_HIv1___Sc0000003	11313832	11314259	428	110	32	0.9363636363636364	+	UGAAAUUCCGAAUAAGUUCUCCAAAACC	32	3	101	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11321069-11322166	Cluster_1315	Pocillopora_meandrina_HIv1___Sc0000003	11321069	11322166	1098	5923	720	0.9662333277055546	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1456	22	5697	14	39	70	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11335082-11335508	Cluster_1316	Pocillopora_meandrina_HIv1___Sc0000003	11335082	11335508	427	271	130	0.8487084870848709	+	UGAUUCAUCAGUAUUAAUGACUGUAGU	59	6	228	2	2	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11335681-11336085	Cluster_1317	Pocillopora_meandrina_HIv1___Sc0000003	11335681	11336085	405	319	201	0.6332288401253918	.	AUGCUUAUAAAACUGACAGAACAAUGGAGA	13	2	269	8	6	14	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11337090-11337595	Cluster_1318	Pocillopora_meandrina_HIv1___Sc0000003	11337090	11337595	506	488	211	0.6659836065573771	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	96	8	428	2	6	22	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11345275-11345703	Cluster_1319	Pocillopora_meandrina_HIv1___Sc0000003	11345275	11345703	429	234	50	1.0	+	UACUAAGGAUCUUGAUCUCUUGUUUGAAG	85	0	230	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11346922-11347354	Cluster_1320	Pocillopora_meandrina_HIv1___Sc0000003	11346922	11347354	433	2418	175	0.9995864350703061	+	UGAAAGACUCCUACAAAACUCCUUUUUGC	830	12	2372	2	9	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11353870-11354297	Cluster_1321	Pocillopora_meandrina_HIv1___Sc0000003	11353870	11354297	428	211	100	1.0	+	UGAUCAUGUCGUUGCUGAAUUGAGGGCAU	26	1	209	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11358732-11359162	Cluster_1322	Pocillopora_meandrina_HIv1___Sc0000003	11358732	11359162	431	225	73	0.9955555555555555	+	UGACCGACUUCAUAAAGACUGACCAAGAGGA	32	4	213	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11360970-11361395	Cluster_1323	Pocillopora_meandrina_HIv1___Sc0000003	11360970	11361395	426	97	30	0.9896907216494846	+	UGGAACUGUCGCUCUUAUAUACAUAAAGU	25	1	96	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11363153-11363582	Cluster_1324	Pocillopora_meandrina_HIv1___Sc0000003	11363153	11363582	430	515	155	0.974757281553398	+	UAUGAGCAAUAUCCCGAUGAGAAAUUUCG	63	27	450	5	7	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11363737-11364796	Cluster_1325	Pocillopora_meandrina_HIv1___Sc0000003	11363737	11364796	1060	15857	1206	0.9988017910071262	+	UAUAGCAGAAAAUGAUGAACCAUAAA	1735	175	15163	78	92	173	176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11365010-11366395	Cluster_1326	Pocillopora_meandrina_HIv1___Sc0000003	11365010	11366395	1386	3740	680	0.9959893048128342	+	UGCAGACUUUGCUUAGGGGUUCAACAUC	974	33	3522	8	57	96	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11378928-11380102	Cluster_1327	Pocillopora_meandrina_HIv1___Sc0000003	11378928	11380102	1175	898	373	0.9376391982182628	+	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	123	15	812	3	8	27	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11380313-11380819	Cluster_1328	Pocillopora_meandrina_HIv1___Sc0000003	11380313	11380819	507	688	268	0.9171511627906976	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	57	10	632	9	2	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11380835-11381261	Cluster_1329	Pocillopora_meandrina_HIv1___Sc0000003	11380835	11381261	427	171	78	0.8947368421052632	+	UGAACUUCUCGGCUCCAAACACUAUGG	51	0	158	0	0	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11381379-11381806	Cluster_1330	Pocillopora_meandrina_HIv1___Sc0000003	11381379	11381806	428	361	173	0.9058171745152355	+	UUUGUCGUGAUCUUUCACUGCUUCUUGC	57	3	343	1	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11381813-11382240	Cluster_1331	Pocillopora_meandrina_HIv1___Sc0000003	11381813	11382240	428	269	139	0.9368029739776952	+	UGAGAUAUUCUCGUAACGCACUUUGAUU	26	2	259	0	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11385933-11386362	Cluster_1332	Pocillopora_meandrina_HIv1___Sc0000003	11385933	11386362	430	170	69	0.9588235294117647	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	29	0	160	2	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11386437-11386980	Cluster_1333	Pocillopora_meandrina_HIv1___Sc0000003	11386437	11386980	544	474	198	0.9240506329113924	+	UGUAUCUUCUUAGGCCAGCAUGUGUACUGA	56	3	458	1	0	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11387132-11387560	Cluster_1334	Pocillopora_meandrina_HIv1___Sc0000003	11387132	11387560	429	219	84	0.9771689497716894	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	37	0	214	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11387865-11388471	Cluster_1335	Pocillopora_meandrina_HIv1___Sc0000003	11387865	11388471	607	1210	373	0.9396694214876034	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	159	13	1131	11	4	24	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11401628-11402661	Cluster_1336	Pocillopora_meandrina_HIv1___Sc0000003	11401628	11402661	1034	533	285	0.8818011257035647	+	UGAAUGAUGUUGUCGAGUAGAUUGAGAGU	24	7	489	0	12	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11403222-11403650	Cluster_1337	Pocillopora_meandrina_HIv1___Sc0000003	11403222	11403650	429	175	58	0.9828571428571429	+	UGUGUGGAUCUGUAAUGCAUCAUGCCGUC	42	4	170	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11404422-11404953	Cluster_1338	Pocillopora_meandrina_HIv1___Sc0000003	11404422	11404953	532	2072	409	0.5931467181467182	.	GUGUAGAUCAGCCGACUUCAACAUGUCA	183	30	1675	10	48	130	179	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11405603-11406230	Cluster_1339	Pocillopora_meandrina_HIv1___Sc0000003	11405603	11406230	628	507	174	0.9704142011834319	+	UACUGAAUUUCUCGCACGCAAAUUGUGGG	115	5	485	0	1	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11406949-11407876	Cluster_1340	Pocillopora_meandrina_HIv1___Sc0000003	11406949	11407876	928	900	420	0.8866666666666667	+	UGAUGUGACCUUGGAUUUAUUUGCGGC	27	11	825	5	14	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11415939-11417910	Cluster_1341	Pocillopora_meandrina_HIv1___Sc0000003	11415939	11417910	1972	5636	1461	0.9366572036905607	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	496	17	5410	12	20	66	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11418446-11418975	Cluster_1342	Pocillopora_meandrina_HIv1___Sc0000003	11418446	11418975	530	316	131	0.9588607594936709	+	UAUUAUACUGCGGGUUACUCAGCCAAGC	23	0	290	2	1	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11419090-11419827	Cluster_1343	Pocillopora_meandrina_HIv1___Sc0000003	11419090	11419827	738	1139	298	0.9376646180860404	+	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	109	7	1076	0	5	23	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11419882-11420309	Cluster_1344	Pocillopora_meandrina_HIv1___Sc0000003	11419882	11420309	428	159	77	0.9748427672955975	+	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	23	2	154	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11420788-11423481	Cluster_1345	Pocillopora_meandrina_HIv1___Sc0000003	11420788	11423481	2694	4347	1489	0.37589141936968024	.	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	196	45	4026	22	23	65	166	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11423483-11424351	Cluster_1346	Pocillopora_meandrina_HIv1___Sc0000003	11423483	11424351	869	1085	544	0.12903225806451613	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	34	18	964	6	15	32	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11424552-11426547	Cluster_1347	Pocillopora_meandrina_HIv1___Sc0000003	11424552	11426547	1996	3446	1192	0.06094022054556007	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	170	36	3177	22	22	76	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11428422-11428852	Cluster_1348	Pocillopora_meandrina_HIv1___Sc0000003	11428422	11428852	431	947	100	0.9820485744456178	+	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	551	7	923	1	2	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11430182-11430731	Cluster_1349	Pocillopora_meandrina_HIv1___Sc0000003	11430182	11430731	550	4324	591	0.41535615171137835	.	ACAAGACAGAAUUCCAGCUGAUACAGA	495	47	3994	14	39	90	140	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11430802-11431829	Cluster_1350	Pocillopora_meandrina_HIv1___Sc0000003	11430802	11431829	1028	4283	896	0.10740135419098762	-	UCUGCGACUAUGAAAUAAGGCUUCUGC	476	52	3996	10	23	80	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11432031-11432913	Cluster_1351	Pocillopora_meandrina_HIv1___Sc0000003	11432031	11432913	883	4782	769	0.1476369719782518	-	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	644	20	4553	35	11	56	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11433933-11435133	Cluster_1352	Pocillopora_meandrina_HIv1___Sc0000003	11433933	11435133	1201	2676	841	0.1591928251121076	-	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	127	39	2458	16	25	37	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11436258-11436994	Cluster_1353	Pocillopora_meandrina_HIv1___Sc0000003	11436258	11436994	737	4054	600	0.021706956092747903	-	UGGAAAAGGCUUGUUGGAAAUCUUCACG	771	14	3977	5	6	17	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11535301-11535725	Cluster_1354	Pocillopora_meandrina_HIv1___Sc0000003	11535301	11535725	425	94	21	1.0	+	GAGAUUCUCAAGAGGAUUGCACUGGAGA	36	2	89	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11639373-11639857	Cluster_1355	Pocillopora_meandrina_HIv1___Sc0000003	11639373	11639857	485	1355	191	0.4974169741697417	.	UUAACUCCACGGUGCCAAUGACUUUCUU	221	8	1130	15	9	92	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11689765-11690191	Cluster_1356	Pocillopora_meandrina_HIv1___Sc0000003	11689765	11690191	427	132	34	0.9924242424242424	+	UUAUAACCGAGUGUGCCUUAUAACCGA	50	2	128	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11710129-11710557	Cluster_1357	Pocillopora_meandrina_HIv1___Sc0000003	11710129	11710557	429	562	75	0.9644128113879004	+	UAACUUCAACUAGAUCAAAAUGCUCGUGA	323	10	544	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11727877-11728296	Cluster_1358	Pocillopora_meandrina_HIv1___Sc0000003	11727877	11728296	420	240	7	0.0	-	CUUGAAGCGGUUGGAUCA	115	240	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11894004-11894429	Cluster_1359	Pocillopora_meandrina_HIv1___Sc0000003	11894004	11894429	426	157	55	0.4968152866242038	.	UCUGACAUCCUUCUUUUAUACUUUGUGC	20	3	98	0	9	15	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12068300-12068733	Cluster_1360	Pocillopora_meandrina_HIv1___Sc0000003	12068300	12068733	434	358	122	0.9134078212290503	+	UAGACAAGAUCUUCAGUAAAAACCAAUUCU	39	28	311	9	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12280391-12280819	Cluster_1361	Pocillopora_meandrina_HIv1___Sc0000003	12280391	12280819	429	400	59	0.9925	+	GCUUGAUGUACGCGAAAGAAAUUGGAUG	79	5	384	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12328371-12328793	Cluster_1362	Pocillopora_meandrina_HIv1___Sc0000003	12328371	12328793	423	79	34	0.9620253164556962	+	UCCAAACUAGAACACAUAAUUUUCCCCCU	16	3	74	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12328977-12329396	Cluster_1363	Pocillopora_meandrina_HIv1___Sc0000003	12328977	12329396	420	102	52	1.0	+	AACAGGUCGAAGGGUAGAGACA	25	20	25	8	33	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12332383-12332813	Cluster_1364	Pocillopora_meandrina_HIv1___Sc0000003	12332383	12332813	431	361	26	0.9307479224376731	+	GCAUUACCUGAUCUUUUGUACCUUAGGCU	135	0	359	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12356919-12357347	Cluster_1365	Pocillopora_meandrina_HIv1___Sc0000003	12356919	12357347	429	260	105	0.20384615384615384	.	GUUCUUAUCAGCAGGAAUACCUCUGUCCA	48	7	225	0	0	9	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12463515-12464186	Cluster_1366	Pocillopora_meandrina_HIv1___Sc0000003	12463515	12464186	672	1030	214	0.7475728155339806	.	CGCUACUUUGACCUCAUU	51	212	778	14	6	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12466781-12467413	Cluster_1367	Pocillopora_meandrina_HIv1___Sc0000003	12466781	12467413	633	346	81	0.9682080924855492	+	UUUCAAACUAAGGAAGGAGAAAGGGAUA	103	1	269	2	2	4	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12564107-12564536	Cluster_1368	Pocillopora_meandrina_HIv1___Sc0000003	12564107	12564536	430	285	114	0.0	-	UCUCAGUGACUUGAGUUCUUCUUGUACGGA	23	1	278	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12565210-12565746	Cluster_1369	Pocillopora_meandrina_HIv1___Sc0000003	12565210	12565746	537	370	150	0.008108108108108109	-	UGUGUAACUGCUGCUGGCGUCGAAGCCAUA	23	2	356	6	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12586001-12586656	Cluster_1370	Pocillopora_meandrina_HIv1___Sc0000003	12586001	12586656	656	468	199	0.36324786324786323	.	UGCAUUGUAAUCGGGAUAGACCUAUUGA	55	17	423	10	2	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12599695-12600122	Cluster_1371	Pocillopora_meandrina_HIv1___Sc0000003	12599695	12600122	428	212	69	0.05660377358490566	-	UGCAUUGUAAUCGGGAUAGACCUAUUGA	37	6	196	4	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12639739-12640148	Cluster_1372	Pocillopora_meandrina_HIv1___Sc0000003	12639739	12640148	410	91	46	0.6593406593406593	.	AGAUACAAAAUGGUCAAGGUUCUUGUUG	11	1	82	2	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12641417-12641824	Cluster_1373	Pocillopora_meandrina_HIv1___Sc0000003	12641417	12641824	408	87	43	0.3793103448275862	.	UGAAACUCUGAUCUGAAAAUAUUUGUC	11	2	83	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12711306-12711720	Cluster_1374	Pocillopora_meandrina_HIv1___Sc0000003	12711306	12711720	415	108	12	0.0	-	AGUGUGCUCUUAACA	97	103	1	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12928764-12930446	Cluster_1375	Pocillopora_meandrina_HIv1___Sc0000003	12928764	12930446	1683	1981	816	0.19131751640585562	-	UCUAACGCGUUUGUCUGACAUCCCUUU	164	37	1775	18	32	33	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12931370-12932839	Cluster_1376	Pocillopora_meandrina_HIv1___Sc0000003	12931370	12932839	1470	16799	2210	0.9002321566759927	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3067	248	14947	178	84	171	1171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13055954-13056371	Cluster_1377	Pocillopora_meandrina_HIv1___Sc0000003	13055954	13056371	418	149	57	0.0	-	GAGAGAGCUCAGAUGUGU	53	99	22	10	5	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13171766-13172167	Cluster_1378	Pocillopora_meandrina_HIv1___Sc0000003	13171766	13172167	402	144	77	0.9652777777777778	+	UUGGCAUGUUCAACUUGGGAAGAGCACC	21	0	136	2	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13330512-13330933	Cluster_1379	Pocillopora_meandrina_HIv1___Sc0000003	13330512	13330933	422	205	92	0.9170731707317074	+	UCACCAAAAUACUCUGACUCUUGCCUGAGA	15	11	182	2	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13331910-13332520	Cluster_1380	Pocillopora_meandrina_HIv1___Sc0000003	13331910	13332520	611	2876	403	0.02920723226703755	-	UGUAAUCCACAUGAUCAGUCCAAGACAGAUU	395	11	2779	3	9	8	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13340424-13340846	Cluster_1381	Pocillopora_meandrina_HIv1___Sc0000003	13340424	13340846	423	115	51	0.9826086956521739	+	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	22	0	104	0	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13396302-13397594	Cluster_1382	Pocillopora_meandrina_HIv1___Sc0000003	13396302	13397594	1293	2892	1003	0.19432918395573998	-	UAGAAGGAUUUGAAAAUGUCAGGCAUGU	211	39	2680	21	16	30	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13398147-13398575	Cluster_1383	Pocillopora_meandrina_HIv1___Sc0000003	13398147	13398575	429	179	101	0.8994413407821229	+	UACUUGACUCUAGGAUACACAAGUUCUGG	36	0	168	1	5	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13398692-13399926	Cluster_1384	Pocillopora_meandrina_HIv1___Sc0000003	13398692	13399926	1235	3183	1029	0.6789192585611059	.	AGGUGUAGAAUGUAAAAAGCAGCU	172	24	2705	25	28	75	326	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13490963-13491389	Cluster_1385	Pocillopora_meandrina_HIv1___Sc0000003	13490963	13491389	427	112	31	0.9375	+	UGUAUCUUCAGAGGACUUCAGGUCGCUCA	43	5	90	3	1	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13511110-13511534	Cluster_1386	Pocillopora_meandrina_HIv1___Sc0000003	13511110	13511534	425	108	38	0.9722222222222222	+	UUUCUUCAGAUUCGAAAAGCUUUCUUC	36	0	103	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13577334-13578578	Cluster_1387	Pocillopora_meandrina_HIv1___Sc0000003	13577334	13578578	1245	1487	552	0.8345662407531943	+	GGGUUAAACAUGAAUGAUUGUCGUG	44	49	1354	6	8	13	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13610033-13610462	Cluster_1388	Pocillopora_meandrina_HIv1___Sc0000003	13610033	13610462	430	148	38	0.8783783783783784	+	AUCUAAACGAACUUGUUUUUCUUAUGAACA	44	6	137	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13659589-13660016	Cluster_1389	Pocillopora_meandrina_HIv1___Sc0000003	13659589	13660016	428	168	59	0.9821428571428571	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	58	2	161	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13680820-13681244	Cluster_1390	Pocillopora_meandrina_HIv1___Sc0000003	13680820	13681244	425	225	157	0.39111111111111113	.	UGCGGACCUUUGUGAGAACAG	6	130	15	54	15	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13841495-13841922	Cluster_1391	Pocillopora_meandrina_HIv1___Sc0000003	13841495	13841922	428	77	15	0.03896103896103896	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	36	0	77	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13864481-13864908	Cluster_1392	Pocillopora_meandrina_HIv1___Sc0000003	13864481	13864908	428	126	51	0.8888888888888888	+	UAGGAUAUAUCACUUGCGUAAUUUACA	20	4	117	1	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13891533-13891952	Cluster_1393	Pocillopora_meandrina_HIv1___Sc0000003	13891533	13891952	420	134	54	0.47761194029850745	.	AUUCGUUUCAAUCGGGGUUUAGACGUU	13	6	118	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13907614-13908040	Cluster_1394	Pocillopora_meandrina_HIv1___Sc0000003	13907614	13908040	427	201	56	0.04975124378109453	-	UCGUUUAGAUCAGAGAUCACCUCAACU	54	5	190	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13952701-13953794	Cluster_1395	Pocillopora_meandrina_HIv1___Sc0000003	13952701	13953794	1094	1150	437	0.9747826086956521	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	109	16	1110	1	1	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13953823-13955208	Cluster_1396	Pocillopora_meandrina_HIv1___Sc0000003	13953823	13955208	1386	992	441	0.9153225806451613	+	UGUUAAAAUUAAAAUCUGCCAGUUCUGC	132	20	903	4	6	24	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13955885-13956927	Cluster_1397	Pocillopora_meandrina_HIv1___Sc0000003	13955885	13956927	1043	842	348	0.9667458432304038	+	UAACAUCUCUCUUUCCGACUUUAACAGC	50	4	805	3	3	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13957064-13958670	Cluster_1398	Pocillopora_meandrina_HIv1___Sc0000003	13957064	13958670	1607	1674	768	0.8775388291517324	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	96	14	1517	13	15	27	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13966898-13967322	Cluster_1399	Pocillopora_meandrina_HIv1___Sc0000003	13966898	13967322	425	102	35	0.029411764705882353	-	UGUGUCGAGAAGAUGUUGCUCUCUAGGGC	39	1	92	0	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13990007-13990434	Cluster_1400	Pocillopora_meandrina_HIv1___Sc0000003	13990007	13990434	428	84	25	0.9880952380952381	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	28	2	77	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14079938-14080510	Cluster_1401	Pocillopora_meandrina_HIv1___Sc0000003	14079938	14080510	573	917	409	0.04034896401308615	-	UCUGUUCCGGUACAAAUUUUCCCUGC	29	13	847	2	7	20	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14080569-14081562	Cluster_1402	Pocillopora_meandrina_HIv1___Sc0000003	14080569	14081562	994	1086	453	0.0865561694290976	-	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	92	8	1010	3	8	8	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14081689-14082742	Cluster_1403	Pocillopora_meandrina_HIv1___Sc0000003	14081689	14082742	1054	895	378	0.030167597765363128	-	UAACAUCUCUCUUUCCGACUUUAACAGC	46	4	859	2	5	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14083663-14084097	Cluster_1404	Pocillopora_meandrina_HIv1___Sc0000003	14083663	14084097	435	632	276	0.08544303797468354	-	UGAUGGAUCACUGCUUGACUUGUUGCA	55	18	532	7	8	18	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14084107-14085920	Cluster_1405	Pocillopora_meandrina_HIv1___Sc0000003	14084107	14085920	1814	4367	1130	0.021754064575223265	-	UUAACGCGUGAACUGCUGAAUACUGGC	299	48	4149	33	31	59	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14165185-14165662	Cluster_1406	Pocillopora_meandrina_HIv1___Sc0000003	14165185	14165662	478	334	110	0.0	-	UCGUUCAUUUACAAGAUUUGCCGCUUCGC	64	1	328	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14220817-14221247	Cluster_1407	Pocillopora_meandrina_HIv1___Sc0000003	14220817	14221247	431	310	44	0.9903225806451613	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	80	1	304	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14221275-14221702	Cluster_1408	Pocillopora_meandrina_HIv1___Sc0000003	14221275	14221702	428	305	66	0.9868852459016394	+	UUGGAACGUGUUGCUGAACGCUUGUUGC	81	2	290	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14274954-14275375	Cluster_1409	Pocillopora_meandrina_HIv1___Sc0000003	14274954	14275375	422	402	134	0.236318407960199	.	UUCGCGUCUGAAGCUGUUAG	106	217	33	45	57	42	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14363055-14363483	Cluster_1410	Pocillopora_meandrina_HIv1___Sc0000003	14363055	14363483	429	423	36	0.9976359338061466	+	UGAAAGACUCCAAUAAAACUCCUCUUU	165	23	358	5	8	21	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14394453-14394954	Cluster_1411	Pocillopora_meandrina_HIv1___Sc0000003	14394453	14394954	502	204	63	0.11764705882352941	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	27	3	197	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14400475-14400896	Cluster_1412	Pocillopora_meandrina_HIv1___Sc0000003	14400475	14400896	422	115	51	0.06956521739130435	-	UGUAAACUCCGUAUUUAACAACAAAU	11	1	110	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14417208-14417849	Cluster_1413	Pocillopora_meandrina_HIv1___Sc0000003	14417208	14417849	642	1034	124	0.9970986460348162	+	UUGGAACGUGUUGCUGAACGCUUGUUA	303	9	998	1	6	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14422810-14424040	Cluster_1414	Pocillopora_meandrina_HIv1___Sc0000003	14422810	14424040	1231	2191	381	0.9821999087174806	+	UAAGCAAUCAACUCCAACAAACUCGUC	574	22	2076	64	5	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14456836-14457261	Cluster_1415	Pocillopora_meandrina_HIv1___Sc0000003	14456836	14457261	426	425	69	0.9529411764705882	+	UAAGACAUUGGCAUACUUGGCAUACA	260	3	399	3	4	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14530563-14530993	Cluster_1416	Pocillopora_meandrina_HIv1___Sc0000003	14530563	14530993	431	267	74	0.9925093632958801	+	UGUAUCUUCGCGUGUCUCUGUGGAUGACU	27	0	265	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14540688-14541196	Cluster_1417	Pocillopora_meandrina_HIv1___Sc0000003	14540688	14541196	509	742	187	0.018867924528301886	-	UUGGAACGUGUUGCUGAACGCUUGUUGUA	147	10	705	3	8	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14577884-14578311	Cluster_1418	Pocillopora_meandrina_HIv1___Sc0000003	14577884	14578311	428	97	25	0.0	-	UUGGUUCUACGGCAUGAGUGAUGACUGU	33	0	97	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14586087-14586515	Cluster_1419	Pocillopora_meandrina_HIv1___Sc0000003	14586087	14586515	429	241	103	0.8921161825726142	+	UGUUAAAUUGGUAGCUGUACAUUUCGAAGC	37	2	223	1	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14666900-14667328	Cluster_1420	Pocillopora_meandrina_HIv1___Sc0000003	14666900	14667328	429	377	162	0.8779840848806366	+	UGUUUUCUUUGAUCCGCAGACGUGACAC	40	5	346	2	3	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14667551-14668885	Cluster_1421	Pocillopora_meandrina_HIv1___Sc0000003	14667551	14668885	1335	1499	489	0.5650433622414943	.	GGGUUUCGUAUCUUGGACAUGUGGUCACA	154	13	1202	12	45	149	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14670104-14670513	Cluster_1422	Pocillopora_meandrina_HIv1___Sc0000003	14670104	14670513	410	169	103	0.5502958579881657	.	UGAAUUUGCUGAACUAAUUCCUGGAGAGC	6	5	135	5	1	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14733119-14733547	Cluster_1423	Pocillopora_meandrina_HIv1___Sc0000003	14733119	14733547	429	646	66	0.9938080495356038	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	320	8	630	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14745273-14746976	Cluster_1424	Pocillopora_meandrina_HIv1___Sc0000003	14745273	14746976	1704	4061	987	0.10588524993843881	-	UUCUUAACGUAGCGCUCUCUGACUUUCC	262	29	3876	23	2	55	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14748358-14748780	Cluster_1425	Pocillopora_meandrina_HIv1___Sc0000003	14748358	14748780	423	401	57	0.0	-	AAAGAAGUACAAGUGGUAGGGUC	230	9	46	21	90	232	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14754052-14754691	Cluster_1426	Pocillopora_meandrina_HIv1___Sc0000003	14754052	14754691	640	274	131	0.6897810218978102	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	47	2	220	6	10	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14755390-14755813	Cluster_1427	Pocillopora_meandrina_HIv1___Sc0000003	14755390	14755813	424	151	85	0.9337748344370861	+	UAUUUUCAAACUGCGACGAUUGCUUCUGA	20	2	140	0	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14760292-14760716	Cluster_1428	Pocillopora_meandrina_HIv1___Sc0000003	14760292	14760716	425	235	130	0.02553191489361702	-	UUGGAGUGUUGUUUGACGCUA	13	2	214	14	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14763327-14763755	Cluster_1429	Pocillopora_meandrina_HIv1___Sc0000003	14763327	14763755	429	278	49	0.8884892086330936	+	AAGGAAUUCAUGACACACAGCAUCAGACG	54	2	229	5	0	4	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14764345-14764773	Cluster_1430	Pocillopora_meandrina_HIv1___Sc0000003	14764345	14764773	429	134	20	0.014925373134328358	-	UAUGAUCAAAUACUGGAUUUCCAUCAUGC	106	0	133	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14791898-14792302	Cluster_1431	Pocillopora_meandrina_HIv1___Sc0000003	14791898	14792302	405	148	67	0.0472972972972973	-	UGAUUUCGCGUGCUCAACUCCGAUAAG	27	4	134	1	4	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14792339-14793038	Cluster_1432	Pocillopora_meandrina_HIv1___Sc0000003	14792339	14793038	700	907	344	0.32083792723263505	.	UGUUUUCUUUGUGUUCAACGUUGCUCGAUC	96	5	843	6	1	23	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14869035-14869462	Cluster_1433	Pocillopora_meandrina_HIv1___Sc0000003	14869035	14869462	428	229	27	1.0	+	UGUUGUGGUUUAGGCAUUCUGUAUCUCA	71	2	217	1	3	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14949573-14950173	Cluster_1434	Pocillopora_meandrina_HIv1___Sc0000003	14949573	14950173	601	1500	197	0.9686666666666667	+	GAUUGGAACAGUCAUCAGACGGGUGGACA	439	7	1422	10	22	16	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14950325-14950752	Cluster_1435	Pocillopora_meandrina_HIv1___Sc0000003	14950325	14950752	428	148	53	0.05405405405405406	-	UAUAACGGUUAAUGUUGACGUCUAAACG	32	2	136	1	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15161453-15161868	Cluster_1436	Pocillopora_meandrina_HIv1___Sc0000003	15161453	15161868	416	164	59	0.06707317073170732	-	UGGUGUCGACUUCCUGUGCAGUUAAAAC	38	0	151	0	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15161969-15162397	Cluster_1437	Pocillopora_meandrina_HIv1___Sc0000003	15161969	15162397	429	223	106	0.10762331838565023	-	UGUUUUGAUCUUAGCGUACUCGUUUGUU	27	0	206	2	2	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15162904-15163330	Cluster_1438	Pocillopora_meandrina_HIv1___Sc0000003	15162904	15163330	427	179	93	0.03910614525139665	-	UGAAUUUCGUCCUUUUCUUUGUCCCAGG	32	0	172	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15164294-15164703	Cluster_1439	Pocillopora_meandrina_HIv1___Sc0000003	15164294	15164703	410	81	30	0.06172839506172839	-	UGCAAAAUCGACUCCGAUAACCUCAAAUGG	28	0	73	1	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15172910-15173338	Cluster_1440	Pocillopora_meandrina_HIv1___Sc0000003	15172910	15173338	429	1420	54	1.0	+	UAACUUCAACUAGAUCGAAAUGCUUGUGA	1049	0	1419	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15177574-15178003	Cluster_1441	Pocillopora_meandrina_HIv1___Sc0000003	15177574	15178003	430	410	143	0.9951219512195122	+	CAAGUGCUGCUUCUGCUACCUGGACAGAUU	47	3	398	2	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15183103-15183550	Cluster_1442	Pocillopora_meandrina_HIv1___Sc0000003	15183103	15183550	448	1414	176	0.92998585572843	+	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	601	5	1368	10	5	18	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15184558-15184980	Cluster_1443	Pocillopora_meandrina_HIv1___Sc0000003	15184558	15184980	423	125	40	0.024	-	UGAAUAGCAUAACUGAUGAACUACGUG	16	1	122	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15261067-15261502	Cluster_1444	Pocillopora_meandrina_HIv1___Sc0000003	15261067	15261502	436	196	61	0.25510204081632654	.	UGUUAAAUUACGAUGCUUCUAACAGUUCUGA	26	4	125	1	2	25	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15349508-15349936	Cluster_1445	Pocillopora_meandrina_HIv1___Sc0000003	15349508	15349936	429	1222	103	0.9991816693944353	+	GAUUGGAACAGUCAUCAGACGGGUGGACA	451	1	1187	1	14	14	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15354686-15355112	Cluster_1446	Pocillopora_meandrina_HIv1___Sc0000003	15354686	15355112	427	167	16	1.0	+	UGUUGUGGUUUAGGCAUUCUGUAUCUCC	49	2	159	1	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15371508-15371934	Cluster_1447	Pocillopora_meandrina_HIv1___Sc0000003	15371508	15371934	427	228	136	0.8377192982456141	+	UGAGUCGAGGUUAUUCACAAUACGAGC	28	4	197	2	3	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15391885-15392481	Cluster_1448	Pocillopora_meandrina_HIv1___Sc0000003	15391885	15392481	597	5670	497	0.9964726631393298	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	872	10	5617	5	1	9	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15400240-15400668	Cluster_1449	Pocillopora_meandrina_HIv1___Sc0000003	15400240	15400668	429	656	73	0.9954268292682927	+	UAUGAUUGCUUGAAAUUGUUAGACCA	411	5	650	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15406618-15407044	Cluster_1450	Pocillopora_meandrina_HIv1___Sc0000003	15406618	15407044	427	101	39	1.0	+	UACGAUGAACUCUUCUGCUAUUGUGGAGA	33	1	97	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15410924-15411859	Cluster_1451	Pocillopora_meandrina_HIv1___Sc0000003	15410924	15411859	936	945	334	0.9068783068783068	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	48	8	890	6	11	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15411937-15412344	Cluster_1452	Pocillopora_meandrina_HIv1___Sc0000003	15411937	15412344	408	150	90	0.58	.	ACUGGAUACAAAACUGCUCGAUGC	13	2	105	0	2	9	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15414332-15414760	Cluster_1453	Pocillopora_meandrina_HIv1___Sc0000003	15414332	15414760	429	154	68	1.0	+	UGUUAUUUGUUCUGGCGAUCUUUCAUCGA	30	4	148	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15416696-15417125	Cluster_1454	Pocillopora_meandrina_HIv1___Sc0000003	15416696	15417125	430	1177	105	1.0	+	UUGGAUCCCGUAACUCUGGAAAGCUCAG	337	9	1160	3	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15417614-15418454	Cluster_1455	Pocillopora_meandrina_HIv1___Sc0000003	15417614	15418454	841	564	203	0.9645390070921985	+	UGUAAGUCUACAGUAGAUUUGGAGGUG	47	7	529	4	2	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15421409-15421836	Cluster_1456	Pocillopora_meandrina_HIv1___Sc0000003	15421409	15421836	428	170	79	1.0	+	UGAUUGGAUGACGUCUUCACUGACUUUGUG	10	4	163	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15431985-15432412	Cluster_1457	Pocillopora_meandrina_HIv1___Sc0000003	15431985	15432412	428	116	20	1.0	+	UGAAAUCUACAAACUUGAAAUACUCAGC	44	0	116	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15450947-15451676	Cluster_1458	Pocillopora_meandrina_HIv1___Sc0000003	15450947	15451676	730	4157	480	0.9930238152513832	+	UAAGACAUUGGUAUACUUCGCAUGCAAGG	520	22	3997	8	23	85	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15452051-15452743	Cluster_1459	Pocillopora_meandrina_HIv1___Sc0000003	15452051	15452743	693	1074	237	0.9972067039106145	+	UUGACUCAACCACUUAACAAGAGCUAGACA	356	2	1049	3	6	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15453438-15454306	Cluster_1460	Pocillopora_meandrina_HIv1___Sc0000003	15453438	15454306	869	5248	524	0.9392149390243902	+	UAUGAUCUGGAUAUAUUGUACAUUUUC	874	15	4900	38	32	56	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15455863-15456299	Cluster_1461	Pocillopora_meandrina_HIv1___Sc0000003	15455863	15456299	437	3651	254	0.9843878389482333	+	UACUGCUCUUCAGUUUCUGUGUUUUCAGGC	1348	3	3612	3	1	6	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15471290-15471708	Cluster_1462	Pocillopora_meandrina_HIv1___Sc0000003	15471290	15471708	419	158	72	0.6835443037974683	.	UCUACUGUCUGCUCUAUCGUAAAUGAAG	15	2	152	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15473030-15473432	Cluster_1463	Pocillopora_meandrina_HIv1___Sc0000003	15473030	15473432	403	166	82	0.6204819277108434	.	UGCUGAAUCCAGUCUCUUUUUAGACAACU	11	3	146	1	3	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15477016-15477447	Cluster_1464	Pocillopora_meandrina_HIv1___Sc0000003	15477016	15477447	432	735	147	0.9768707482993197	+	UGUAAUCUCAAUGCUGGUGCUCUGGCAC	136	1	707	0	0	15	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15478461-15479040	Cluster_1465	Pocillopora_meandrina_HIv1___Sc0000003	15478461	15479040	580	5047	263	0.06657420249653259	-	CUGGAUUUCAAAAAGAACCUAA	3461	39	1016	115	3845	3	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15480587-15481499	Cluster_1466	Pocillopora_meandrina_HIv1___Sc0000003	15480587	15481499	913	797	340	0.5144291091593476	.	UCGGUGCCACAACUGACUGAAAUUUAAUUC	37	9	680	6	6	19	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15487197-15487656	Cluster_1467	Pocillopora_meandrina_HIv1___Sc0000003	15487197	15487656	460	925	240	0.23891891891891892	.	UGUGAGCGAAAACGACCGUGAAACGAACG	62	6	736	29	20	81	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15495968-15496395	Cluster_1468	Pocillopora_meandrina_HIv1___Sc0000003	15495968	15496395	428	105	27	0.02857142857142857	-	UUGACGUUCGCUCCAGAAAGCGUUGGAGA	57	6	89	8	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15497524-15498143	Cluster_1469	Pocillopora_meandrina_HIv1___Sc0000003	15497524	15498143	620	324	133	0.9753086419753086	+	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	52	0	322	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15939760-15940604	Cluster_1470	Pocillopora_meandrina_HIv1___Sc0000003	15939760	15940604	845	99173	1530	0.9999193328829419	+	GAGACUUGAAGCGGUUGGA	14421	78248	1362	9597	4921	2997	2048	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15940749-15941463	Cluster_1471	Pocillopora_meandrina_HIv1___Sc0000003	15940749	15941463	715	35458	326	0.9998871904788764	+	CACUUUCUGGAGUUAAGGCC	15564	22148	153	9766	3171	202	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16071252-16072364	Cluster_1472	Pocillopora_meandrina_HIv1___Sc0000003	16071252	16072364	1113	30228	1492	0.9999338361783776	+	GUGGACUGCUUGCAGUGCUCCG	3194	11640	7043	1940	6113	2133	1359	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16161170-16161598	Cluster_1473	Pocillopora_meandrina_HIv1___Sc0000003	16161170	16161598	429	144	48	0.9652777777777778	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	44	0	143	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16162242-16162671	Cluster_1474	Pocillopora_meandrina_HIv1___Sc0000003	16162242	16162671	430	205	62	0.9463414634146341	+	UAAUGGGAAAACGAGAACAGCGUGAGUGU	38	0	189	1	0	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16173664-16174217	Cluster_1475	Pocillopora_meandrina_HIv1___Sc0000003	16173664	16174217	554	84369	2971	0.9992295748438408	+	UGAGAUUAAGCCUUUGUUCUAAGAUUUGU	20071	18807	51152	4500	2184	3612	4114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16338462-16338888	Cluster_1476	Pocillopora_meandrina_HIv1___Sc0000003	16338462	16338888	427	180	101	0.09444444444444444	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	19	1	176	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16356576-16357005	Cluster_1477	Pocillopora_meandrina_HIv1___Sc0000003	16356576	16357005	430	229	115	0.777292576419214	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	15	2	207	1	2	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16358521-16359354	Cluster_1478	Pocillopora_meandrina_HIv1___Sc0000003	16358521	16359354	834	595	238	0.03865546218487395	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	45	5	576	0	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16387247-16387675	Cluster_1479	Pocillopora_meandrina_HIv1___Sc0000003	16387247	16387675	429	199	90	0.8894472361809045	+	UGCUUCUUGAACUGGAUAGCGCUGAUGGU	18	22	169	3	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16784530-16784940	Cluster_1480	Pocillopora_meandrina_HIv1___Sc0000003	16784530	16784940	411	117	53	1.0	+	AGACCCAUGGCAGACUUUUUG	41	17	31	48	14	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16794495-16794928	Cluster_1481	Pocillopora_meandrina_HIv1___Sc0000003	16794495	16794928	434	251	69	0.20318725099601595	.	UUCAUGACUUCCAAACAUUUCUUUGUCGA	44	1	249	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16918402-16918829	Cluster_1482	Pocillopora_meandrina_HIv1___Sc0000003	16918402	16918829	428	260	128	0.823076923076923	+	UAAUUAGACUUGGAUGCGUGAUGCGAUA	18	4	237	2	1	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16943988-16944596	Cluster_1483	Pocillopora_meandrina_HIv1___Sc0000003	16943988	16944596	609	397	95	0.010075566750629723	-	UACCAUAGAACUUUCAAGAACAUUUCAUC	146	5	368	4	5	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17032395-17032822	Cluster_1484	Pocillopora_meandrina_HIv1___Sc0000003	17032395	17032822	428	202	25	0.1782178217821782	-	UUUCCAGGUUGUCUGAUAAUUGUUGGGC	56	0	199	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17111097-17111524	Cluster_1485	Pocillopora_meandrina_HIv1___Sc0000003	17111097	17111524	428	157	60	0.01910828025477707	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	45	1	150	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17261328-17261746	Cluster_1486	Pocillopora_meandrina_HIv1___Sc0000003	17261328	17261746	419	70	15	0.0	-	UUGCAAUUGAAGACGAUCUCGGGCGCCCA	45	0	69	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17413456-17414292	Cluster_1487	Pocillopora_meandrina_HIv1___Sc0000003	17413456	17414292	837	1021	281	0.6758080313418218	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	181	4	982	6	3	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17434777-17435282	Cluster_1488	Pocillopora_meandrina_HIv1___Sc0000003	17434777	17435282	506	22316	91	0.005690984047320308	-	UACCAAGGUCUUGUAGUCUAGUACAACU	13061	16	22224	4	10	23	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17468772-17469200	Cluster_1489	Pocillopora_meandrina_HIv1___Sc0000003	17468772	17469200	429	97	16	0.18556701030927836	-	CUUCAUUCUGAUCUAUUGUUACAGUUACAAC	38	0	95	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17512565-17513156	Cluster_1490	Pocillopora_meandrina_HIv1___Sc0000003	17512565	17513156	592	3122	388	0.9711723254324152	+	AAGGAGUUGAAAAGAACAAUGAUGUAGC	398	26	3008	6	14	27	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17513340-17514790	Cluster_1491	Pocillopora_meandrina_HIv1___Sc0000003	17513340	17514790	1451	5620	613	0.3222419928825623	.	AAGAAGAUCAGAGAAUGUUAAUUGAGA	548	28	4623	43	257	152	517	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17530878-17531307	Cluster_1492	Pocillopora_meandrina_HIv1___Sc0000003	17530878	17531307	430	428	36	0.9929906542056075	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	160	0	426	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17533552-17533974	Cluster_1493	Pocillopora_meandrina_HIv1___Sc0000003	17533552	17533974	423	156	55	0.0	-	CAAAAACGCAUUUUCCUGCAAUCUGGA	29	2	118	0	3	29	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17622970-17623392	Cluster_1494	Pocillopora_meandrina_HIv1___Sc0000003	17622970	17623392	423	104	13	1.0	+	GAGGACUUUGUAGCAACCUUGAC	41	15	34	1	0	41	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17651813-17652242	Cluster_1495	Pocillopora_meandrina_HIv1___Sc0000003	17651813	17652242	430	421	41	0.9928741092636579	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	172	1	419	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17729370-17729790	Cluster_1496	Pocillopora_meandrina_HIv1___Sc0000003	17729370	17729790	421	241	120	0.06224066390041494	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	13	3	210	4	0	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17730014-17730841	Cluster_1497	Pocillopora_meandrina_HIv1___Sc0000003	17730014	17730841	828	1102	279	0.056261343012704176	-	UAAAGUUUACUUGUUGUUCUUCUCUGAGU	138	6	1034	2	2	34	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17733612-17734037	Cluster_1498	Pocillopora_meandrina_HIv1___Sc0000003	17733612	17734037	426	155	72	0.0064516129032258064	-	UGAUUGACGUACGGUAUUUGAGACGC	23	1	146	3	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17787052-17787502	Cluster_1499	Pocillopora_meandrina_HIv1___Sc0000003	17787052	17787502	451	482	160	0.12240663900414937	-	UUAUUUUUGUUUCAAAUCGCCAUGUUCACU	72	8	421	5	3	5	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17824871-17825300	Cluster_1500	Pocillopora_meandrina_HIv1___Sc0000003	17824871	17825300	430	464	41	0.9935344827586207	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	178	0	464	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17891379-17891806	Cluster_1501	Pocillopora_meandrina_HIv1___Sc0000003	17891379	17891806	428	316	63	0.0031645569620253164	-	UAGGCUGGUACCUUUGAAAAUUGAGGGC	52	6	282	0	1	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17906949-17907368	Cluster_1502	Pocillopora_meandrina_HIv1___Sc0000003	17906949	17907368	420	102	36	0.6666666666666666	.	GCAACUUCCGCCUAGACUGAC	37	20	8	61	8	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17907446-17907876	Cluster_1503	Pocillopora_meandrina_HIv1___Sc0000003	17907446	17907876	431	877	135	0.0	-	AAGGAAACAAAUCGGUUUAAACUCACAUU	231	24	824	4	9	12	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17971672-17972100	Cluster_1504	Pocillopora_meandrina_HIv1___Sc0000003	17971672	17972100	429	172	38	0.9941860465116279	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	70	0	158	0	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18010570-18011565	Cluster_1505	Pocillopora_meandrina_HIv1___Sc0000003	18010570	18011565	996	7952	551	0.9839034205231388	+	UUGGACUGUGCAUAACCAUUUGU	2110	27	5504	3	111	2180	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18046159-18046588	Cluster_1506	Pocillopora_meandrina_HIv1___Sc0000003	18046159	18046588	430	330	124	1.0	+	GAAUCUUAAUCUUCUCUCUGAGCAUA	20	67	164	27	23	18	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18052632-18053169	Cluster_1507	Pocillopora_meandrina_HIv1___Sc0000003	18052632	18053169	538	7386	731	0.001760086650419713	-	CUGUGCCGACGACUGGAGACAC	1043	749	1554	906	1757	1381	1039	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18105568-18105995	Cluster_1508	Pocillopora_meandrina_HIv1___Sc0000003	18105568	18105995	428	85	8	0.9882352941176471	+	UUGUCUACAGGAAGCCUGUCCAUUUUGU	78	2	80	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18106323-18106749	Cluster_1509	Pocillopora_meandrina_HIv1___Sc0000003	18106323	18106749	427	232	118	0.11206896551724138	-	UGAGUCGAGGUUAUUCACAAUACGAGC	42	2	202	0	4	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18107408-18107834	Cluster_1510	Pocillopora_meandrina_HIv1___Sc0000003	18107408	18107834	427	108	27	0.07407407407407407	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	53	3	98	4	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18358791-18359211	Cluster_1511	Pocillopora_meandrina_HIv1___Sc0000003	18358791	18359211	421	124	34	0.008064516129032258	-	CGGAGACGUCGAAUUCUGG	21	50	59	7	7	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18668899-18669328	Cluster_1512	Pocillopora_meandrina_HIv1___Sc0000003	18668899	18669328	430	159	27	0.006289308176100629	-	UUCGAUCUUAAAUUUACUGCAUGUUUCUA	62	0	159	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18739258-18739688	Cluster_1513	Pocillopora_meandrina_HIv1___Sc0000003	18739258	18739688	431	291	135	0.9965635738831615	+	UAUUUUUAAUCUCUUGCAUACCCUGUUGG	31	3	286	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18836097-18836527	Cluster_1514	Pocillopora_meandrina_HIv1___Sc0000003	18836097	18836527	431	377	103	0.8169761273209549	+	AUUGAUUCUAUUUUGUACGGCCUAGU	101	5	352	2	3	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18887952-18888505	Cluster_1515	Pocillopora_meandrina_HIv1___Sc0000003	18887952	18888505	554	2232	263	0.9112903225806451	+	UGAAGUCGAGCUAGAAGAGGA	525	890	555	655	107	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19027733-19028192	Cluster_1516	Pocillopora_meandrina_HIv1___Sc0000003	19027733	19028192	460	507	210	1.0	+	AUGCUGCCUUCCUUCUGAUA	41	168	182	65	24	27	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19032558-19032979	Cluster_1517	Pocillopora_meandrina_HIv1___Sc0000003	19032558	19032979	422	419	274	0.9976133651551312	+	CAUGUAUGUGGUCUUGAAAGA	9	62	214	46	29	29	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19040021-19040486	Cluster_1518	Pocillopora_meandrina_HIv1___Sc0000003	19040021	19040486	466	490	186	0.0	-	GAGAAAACCAUGCUGCCUUCCUUCUGAUA	39	133	200	54	31	34	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19253239-19253686	Cluster_1519	Pocillopora_meandrina_HIv1___Sc0000003	19253239	19253686	448	1332	164	0.93993993993994	+	UGAAGACUGGUCCUGAUAUCAUCAUAU	205	11	1223	8	6	65	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19272676-19273104	Cluster_1520	Pocillopora_meandrina_HIv1___Sc0000003	19272676	19273104	429	96	34	0.96875	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	30	0	94	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19321353-19321778	Cluster_1521	Pocillopora_meandrina_HIv1___Sc0000003	19321353	19321778	426	146	66	0.9657534246575342	+	UAGGAUCGUUCUAGAAAACCAGCGUAAGA	27	2	132	2	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19363636-19364061	Cluster_1522	Pocillopora_meandrina_HIv1___Sc0000003	19363636	19364061	426	90	32	0.9888888888888889	+	UGUGUAGAUAUGUCUUUUGGACAGGA	22	0	90	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12833-13750	Cluster_1523	Pocillopora_meandrina_HIv1___Sc0000004	12833	13750	918	1024	389	0.822265625	+	UGUUGAUUGCUGGUUGAAUAUGAUGUC	54	28	878	7	12	37	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13981-14409	Cluster_1524	Pocillopora_meandrina_HIv1___Sc0000004	13981	14409	429	161	25	0.9751552795031055	+	UUGACUGACAGAAGAUCUGGAAACUGAAG	50	3	147	1	9	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:59217-59730	Cluster_1525	Pocillopora_meandrina_HIv1___Sc0000004	59217	59730	514	607	238	0.20593080724876442	.	UUUCAAAGCUUUUAUCAACUGUGGGA	24	3	547	6	3	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:59999-60553	Cluster_1526	Pocillopora_meandrina_HIv1___Sc0000004	59999	60553	555	197	88	0.04060913705583756	-	UGUAUUCUGCUACUGGUUCUCCCGAGC	33	3	184	1	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:61957-62666	Cluster_1527	Pocillopora_meandrina_HIv1___Sc0000004	61957	62666	710	336	142	0.08035714285714286	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	37	2	306	2	5	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:232184-233964	Cluster_1528	Pocillopora_meandrina_HIv1___Sc0000004	232184	233964	1781	3992	1245	0.999749498997996	+	GGGGCGAUAAACCAUACAAUGGACAUUU	454	538	2742	139	178	224	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:234171-234601	Cluster_1529	Pocillopora_meandrina_HIv1___Sc0000004	234171	234601	431	444	280	0.9977477477477478	+	UGGCAUAAUCUGUGUGGAGGACCUCAUUC	19	78	240	22	30	31	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:259167-259571	Cluster_1530	Pocillopora_meandrina_HIv1___Sc0000004	259167	259571	405	91	47	0.7362637362637363	.	UGAGACAUUUUGAGACACUCGUGAGACA	21	2	79	1	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:259608-260035	Cluster_1531	Pocillopora_meandrina_HIv1___Sc0000004	259608	260035	428	151	36	0.695364238410596	.	UGAAAUUCCGAAUAAGUUCUCCAAAACC	49	5	143	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:270457-271009	Cluster_1532	Pocillopora_meandrina_HIv1___Sc0000004	270457	271009	553	214	79	0.9205607476635514	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	34	0	190	0	5	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:271362-271961	Cluster_1533	Pocillopora_meandrina_HIv1___Sc0000004	271362	271961	600	1564	271	0.8069053708439897	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	534	8	1493	8	5	9	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:396741-397439	Cluster_1534	Pocillopora_meandrina_HIv1___Sc0000004	396741	397439	699	710	200	0.12394366197183099	-	UUGGAUAAUUUUGACGAAACCAGAGACA	187	3	650	1	12	14	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:397704-398313	Cluster_1535	Pocillopora_meandrina_HIv1___Sc0000004	397704	398313	610	547	239	0.659963436928702	.	UUAACUCCGAGGACACUCUUAGAAGGAUA	31	15	447	0	5	31	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:398645-399791	Cluster_1536	Pocillopora_meandrina_HIv1___Sc0000004	398645	399791	1147	1214	320	0.7421746293245469	.	AGCAUACUCGAAGAACUGCAAGUUAAUGG	112	124	1048	7	8	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:400950-401796	Cluster_1537	Pocillopora_meandrina_HIv1___Sc0000004	400950	401796	847	616	178	0.2288961038961039	.	UGUGUUCGUUGAAUGGCUCCCCAUGCGG	87	7	587	0	5	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:618404-618834	Cluster_1538	Pocillopora_meandrina_HIv1___Sc0000004	618404	618834	431	198	78	0.98989898989899	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	1	186	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:619070-619497	Cluster_1539	Pocillopora_meandrina_HIv1___Sc0000004	619070	619497	428	360	184	0.8416666666666667	+	UCAUAACUGCUGGUUUGACGUAGUCGUC	35	20	308	5	3	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:620412-620837	Cluster_1540	Pocillopora_meandrina_HIv1___Sc0000004	620412	620837	426	86	31	0.9767441860465116	+	UUUGCACCGUUUUUCUUGAAUAUAGACACA	16	2	82	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:629145-629570	Cluster_1541	Pocillopora_meandrina_HIv1___Sc0000004	629145	629570	426	101	31	0.9801980198019802	+	UGUGUAGAUAUGUCUUUUGGACAGGA	31	0	99	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:791121-791723	Cluster_1542	Pocillopora_meandrina_HIv1___Sc0000004	791121	791723	603	366	132	0.1284153005464481	-	UCGGACUGUGCAUAACCAUUUGCAAAC	92	2	345	2	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1005934-1006361	Cluster_1543	Pocillopora_meandrina_HIv1___Sc0000004	1005934	1006361	428	88	26	0.9886363636363636	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	2	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1197941-1198368	Cluster_1544	Pocillopora_meandrina_HIv1___Sc0000004	1197941	1198368	428	277	41	0.04332129963898917	-	UGUGCAAUAUUAACUCUAAGCUGGUCUU	141	0	276	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1599741-1600171	Cluster_1545	Pocillopora_meandrina_HIv1___Sc0000004	1599741	1600171	431	1180	8	0.0	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	1165	0	1180	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1686231-1686659	Cluster_1546	Pocillopora_meandrina_HIv1___Sc0000004	1686231	1686659	429	160	19	0.0	-	UGAAGAUUUGAACAAUGUAAGAAUUGAAC	122	0	160	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1746478-1746899	Cluster_1547	Pocillopora_meandrina_HIv1___Sc0000004	1746478	1746899	422	70	1	0.0	-	UCUGACGAAGGGCUGACACUCG	70	0	0	0	70	0	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1826771-1827308	Cluster_1548	Pocillopora_meandrina_HIv1___Sc0000004	1826771	1827308	538	453	136	0.0	-	ACCGUGUUUUGUUUGAUCCUUG	51	111	156	28	71	28	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1989511-1989927	Cluster_1549	Pocillopora_meandrina_HIv1___Sc0000004	1989511	1989927	417	102	31	0.24509803921568626	.	AGUGUUUGAAUUUUUGAAAGAAAUGGUC	36	7	93	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2224061-2224490	Cluster_1550	Pocillopora_meandrina_HIv1___Sc0000004	2224061	2224490	430	193	56	0.9585492227979274	+	AAACUGAUAAUAAUGCUCUCUGUGUCAUGC	68	2	168	0	1	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2261094-2261578	Cluster_1551	Pocillopora_meandrina_HIv1___Sc0000004	2261094	2261578	485	403	73	0.7617866004962779	.	UAAUCUUCAAUGGACGAUGCCAACUCUUUGA	185	2	390	5	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2308935-2309364	Cluster_1552	Pocillopora_meandrina_HIv1___Sc0000004	2308935	2309364	430	2256	85	0.008865248226950355	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAA	791	395	1816	24	5	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2741143-2741832	Cluster_1553	Pocillopora_meandrina_HIv1___Sc0000004	2741143	2741832	690	856	206	0.919392523364486	+	AUUUGUGAAAGAAAUGAUUUGGAGACCCC	102	17	739	6	35	7	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2742408-2742838	Cluster_1554	Pocillopora_meandrina_HIv1___Sc0000004	2742408	2742838	431	1426	143	0.03225806451612903	-	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	363	2	1417	3	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2743581-2744025	Cluster_1555	Pocillopora_meandrina_HIv1___Sc0000004	2743581	2744025	445	262	50	0.7022900763358778	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	77	4	252	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2744502-2745277	Cluster_1556	Pocillopora_meandrina_HIv1___Sc0000004	2744502	2745277	776	1246	232	0.6597110754414125	.	UCACCAUGAAAAGACUCUGGGCCAAAG	129	6	1174	1	1	18	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2776672-2777091	Cluster_1557	Pocillopora_meandrina_HIv1___Sc0000004	2776672	2777091	420	2038	19	1.0	+	GAAGUUCUGGUUUAAAAAA	881	2034	0	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2790502-2791317	Cluster_1558	Pocillopora_meandrina_HIv1___Sc0000004	2790502	2791317	816	3228	548	0.039962825278810406	-	UGUUUACGUUGUGCAUCCAUGGUUUUGU	451	12	3136	9	10	20	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2799128-2801583	Cluster_1559	Pocillopora_meandrina_HIv1___Sc0000004	2799128	2801583	2456	12240	3007	0.041993464052287585	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	504	127	11114	64	93	186	656	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2802251-2802795	Cluster_1560	Pocillopora_meandrina_HIv1___Sc0000004	2802251	2802795	545	441	197	0.20408163265306123	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	105	15	377	11	13	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2813610-2814029	Cluster_1561	Pocillopora_meandrina_HIv1___Sc0000004	2813610	2814029	420	348	193	0.0028735632183908046	-	CUGCGAACUGCUUUGAGCCA	13	129	142	20	22	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3009068-3009494	Cluster_1562	Pocillopora_meandrina_HIv1___Sc0000004	3009068	3009494	427	120	56	0.1	-	AUCUUUUUAAUUCACUGAAUCUCUUGGUA	35	8	108	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3088358-3088780	Cluster_1563	Pocillopora_meandrina_HIv1___Sc0000004	3088358	3088780	423	230	78	0.23478260869565218	.	UUCGCGUCUGAAGCUGUUAGAGU	64	21	51	10	39	104	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3210060-3210488	Cluster_1564	Pocillopora_meandrina_HIv1___Sc0000004	3210060	3210488	429	92	33	0.9891304347826086	+	UGACUUUAUUUGCGUCACGGAUUAGCUGG	24	1	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3245027-3246119	Cluster_1565	Pocillopora_meandrina_HIv1___Sc0000004	3245027	3246119	1093	110348	11950	0.999220647406387	+	AAGGCGAGCUCAGCGAGAACA	2029	32260	39016	11308	10819	8226	8719	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3432324-3432751	Cluster_1566	Pocillopora_meandrina_HIv1___Sc0000004	3432324	3432751	428	269	65	0.04460966542750929	-	UCUAGCAGAUCGUACUCCUCAAGGUGCU	56	0	257	1	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3629589-3630983	Cluster_1567	Pocillopora_meandrina_HIv1___Sc0000004	3629589	3630983	1395	1455	595	0.09140893470790377	-	UCCGUGACACAACGACUUUGCCUUGCUU	112	9	1402	4	2	9	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3631518-3631946	Cluster_1568	Pocillopora_meandrina_HIv1___Sc0000004	3631518	3631946	429	128	42	0.0	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	15	1	126	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3773184-3773603	Cluster_1569	Pocillopora_meandrina_HIv1___Sc0000004	3773184	3773603	420	158	101	0.0	-	CAUGGGAUUCGGACUGUUUGACUAACCA	7	35	88	7	9	16	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3776194-3776606	Cluster_1570	Pocillopora_meandrina_HIv1___Sc0000004	3776194	3776606	413	221	149	0.0	-	CACAUCAAAGGCAAUGUAGGCUU	10	48	101	16	20	19	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3776658-3777077	Cluster_1571	Pocillopora_meandrina_HIv1___Sc0000004	3776658	3777077	420	154	102	0.0	-	CUGCGUGGUAGAGCUGAAAUUCU	10	31	61	14	16	21	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3791888-3792295	Cluster_1572	Pocillopora_meandrina_HIv1___Sc0000004	3791888	3792295	408	80	36	0.1375	-	UAAUCGUUGGCUUUUUCUCGAGACGUG	12	5	73	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3792382-3792808	Cluster_1573	Pocillopora_meandrina_HIv1___Sc0000004	3792382	3792808	427	162	48	0.9567901234567902	+	UAAUCGUUGGCUUUUUCUCGAGACGUG	62	15	135	7	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3842859-3843307	Cluster_1574	Pocillopora_meandrina_HIv1___Sc0000004	3842859	3843307	449	6147	156	0.00016268098259313488	-	CUCCCGGACAGGCCCCCA	4335	6039	91	12	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4084450-4084929	Cluster_1575	Pocillopora_meandrina_HIv1___Sc0000004	4084450	4084929	480	379	68	0.013192612137203167	-	CAACAAAUCAAACUUAGAGGCUCUUCAGCGG	96	3	369	0	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4090054-4090483	Cluster_1576	Pocillopora_meandrina_HIv1___Sc0000004	4090054	4090483	430	264	88	0.9431818181818182	+	UGAACAUUCCGGUAUUCUUUUCGCUGAAUU	65	1	258	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4163017-4163444	Cluster_1577	Pocillopora_meandrina_HIv1___Sc0000004	4163017	4163444	428	253	88	0.9683794466403162	+	CCAUUUCCCAAGUAGUCUCUCUCAAAGG	59	6	229	1	4	13	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4319820-4320236	Cluster_1578	Pocillopora_meandrina_HIv1___Sc0000004	4319820	4320236	417	112	54	0.875	+	UGAAAAACUGUGACCGAGGU	11	62	0	24	21	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4328549-4328980	Cluster_1579	Pocillopora_meandrina_HIv1___Sc0000004	4328549	4328980	432	645	81	0.9953488372093023	+	CGGCCUAAAAAAAAAAAAAAAAAAAAAAAA	119	96	467	12	20	32	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4376005-4376655	Cluster_1580	Pocillopora_meandrina_HIv1___Sc0000004	4376005	4376655	651	781	311	0.20358514724711907	.	UGACUAUCAUCUGAAAGGGGCAAUUGGU	64	34	676	2	12	24	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4376700-4377128	Cluster_1581	Pocillopora_meandrina_HIv1___Sc0000004	4376700	4377128	429	261	89	0.9080459770114943	+	UAUGCAUUCAAUGAUCGUGGUCGG	31	4	178	3	3	10	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4378333-4378756	Cluster_1582	Pocillopora_meandrina_HIv1___Sc0000004	4378333	4378756	424	176	73	0.26136363636363635	.	UGUUACAAAACCAUUAGAACUAUCAGUU	23	5	141	2	5	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4378770-4379187	Cluster_1583	Pocillopora_meandrina_HIv1___Sc0000004	4378770	4379187	418	155	79	0.12903225806451613	-	UGCAUGUGCUUUGUCUUGGAUUUCAUAGU	14	5	145	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4379913-4380388	Cluster_1584	Pocillopora_meandrina_HIv1___Sc0000004	4379913	4380388	476	279	91	0.9032258064516129	+	UUUUAUCUCUGCUAUUCCCAUAUCAAGG	41	5	263	0	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4485347-4485775	Cluster_1585	Pocillopora_meandrina_HIv1___Sc0000004	4485347	4485775	429	173	82	0.15028901734104047	-	UGAACGUAUAGCCAUCCAGUUGAACUUG	14	3	166	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4485786-4486210	Cluster_1586	Pocillopora_meandrina_HIv1___Sc0000004	4485786	4486210	425	167	112	0.2215568862275449	.	UUAACACUAUAAACAUUCUGAGGGCGAU	10	2	150	4	5	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4818222-4818644	Cluster_1587	Pocillopora_meandrina_HIv1___Sc0000004	4818222	4818644	423	214	143	1.0	+	AAUGCGGUGGAAUCGAUAAA	7	57	88	14	21	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4819057-4819499	Cluster_1588	Pocillopora_meandrina_HIv1___Sc0000004	4819057	4819499	443	301	183	1.0	+	CAAGGCUGAGCGUGAGCGU	21	106	118	22	18	23	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4819743-4820269	Cluster_1589	Pocillopora_meandrina_HIv1___Sc0000004	4819743	4820269	527	427	304	1.0	+	AUUGGUUGUUGCUGCUGGU	6	154	139	46	24	27	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4822114-4822623	Cluster_1590	Pocillopora_meandrina_HIv1___Sc0000004	4822114	4822623	510	486	327	0.9979423868312757	+	CCUGGUGACAAUGUUGGCU	9	133	185	45	54	31	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4822932-4823767	Cluster_1591	Pocillopora_meandrina_HIv1___Sc0000004	4822932	4823767	836	1682	960	1.0	+	AGUCAAUCAUGCUGUAGUAGUU	25	367	775	126	145	106	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5173417-5173842	Cluster_1592	Pocillopora_meandrina_HIv1___Sc0000004	5173417	5173842	426	96	35	0.03125	-	UUCUGCCGUUUUGGGCUUGCUUUGCCAUC	22	0	92	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5174422-5174920	Cluster_1593	Pocillopora_meandrina_HIv1___Sc0000004	5174422	5174920	499	1207	171	0.8881524440762221	+	UUCGAGUGCAAAGAUGAAGGAGCUGGUG	246	29	891	7	3	45	232	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5175570-5175998	Cluster_1594	Pocillopora_meandrina_HIv1___Sc0000004	5175570	5175998	429	175	65	0.09714285714285714	-	UAUAUUCGCCUGGAAUUAGCCCUCCCCCU	17	4	171	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5176317-5176743	Cluster_1595	Pocillopora_meandrina_HIv1___Sc0000004	5176317	5176743	427	122	40	0.0	-	UGGGAUUGCUUACUCCUGGUGUUGGUAUA	21	0	117	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5176970-5177398	Cluster_1596	Pocillopora_meandrina_HIv1___Sc0000004	5176970	5177398	429	114	40	0.5350877192982456	.	UGACAAUGAACUCGACAGAAACUAUUUAG	25	0	110	3	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5178359-5178783	Cluster_1597	Pocillopora_meandrina_HIv1___Sc0000004	5178359	5178783	425	271	53	0.940959409594096	+	AUGGACAGAACACAGGAAGUGCU	58	5	104	2	4	117	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5179682-5180102	Cluster_1598	Pocillopora_meandrina_HIv1___Sc0000004	5179682	5180102	421	96	22	0.010416666666666666	-	UGCGUUUCCAUUACUUCUGCGUAGAAUA	29	2	84	0	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5181406-5181831	Cluster_1599	Pocillopora_meandrina_HIv1___Sc0000004	5181406	5181831	426	97	37	0.030927835051546393	-	UGAAAUCUCCUGCUCCCUCUUUAAUGAGC	25	5	88	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5206769-5207196	Cluster_1600	Pocillopora_meandrina_HIv1___Sc0000004	5206769	5207196	428	215	56	0.004651162790697674	-	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	85	2	209	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5570357-5571044	Cluster_1601	Pocillopora_meandrina_HIv1___Sc0000004	5570357	5571044	688	4695	195	0.01448349307774228	-	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	2064	3	4644	2	7	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5818426-5818894	Cluster_1602	Pocillopora_meandrina_HIv1___Sc0000004	5818426	5818894	469	379	189	0.9920844327176781	+	ACCAGGAUGGCCGAGUGG	29	172	96	36	21	23	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6050031-6050443	Cluster_1603	Pocillopora_meandrina_HIv1___Sc0000004	6050031	6050443	413	77	36	1.0	+	UCAGCACGUGUACUAUGCUGCUCACUCGGU	16	5	70	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6129912-6130372	Cluster_1604	Pocillopora_meandrina_HIv1___Sc0000004	6129912	6130372	461	328	129	0.6371951219512195	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	59	9	250	2	13	24	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6156615-6157956	Cluster_1605	Pocillopora_meandrina_HIv1___Sc0000004	6156615	6157956	1342	6384	1283	0.15852130325814537	-	UCACAGGUAUAUAUUCUAUCGCUCUUCAAC	939	62	5947	30	46	110	189	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6169126-6169554	Cluster_1606	Pocillopora_meandrina_HIv1___Sc0000004	6169126	6169554	429	625	76	1.0	+	UCAGAGAUGUCAACCUUAUUGCUACUAGC	297	1	619	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6184636-6185065	Cluster_1607	Pocillopora_meandrina_HIv1___Sc0000004	6184636	6185065	430	126	30	1.0	+	UCAACAUGUGUACUAUGCUGCUCACCCGGU	34	1	123	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6216721-6217149	Cluster_1608	Pocillopora_meandrina_HIv1___Sc0000004	6216721	6217149	429	207	94	0.7342995169082126	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	59	44	141	14	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6226334-6226763	Cluster_1609	Pocillopora_meandrina_HIv1___Sc0000004	6226334	6226763	430	111	34	1.0	+	UCAACAUGUGUACUAUGCUGCUCACCCGGU	29	1	105	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6280470-6280899	Cluster_1610	Pocillopora_meandrina_HIv1___Sc0000004	6280470	6280899	430	192	67	1.0	+	UCAACAUGUGUACUAUGCUGCUCACUCGGU	46	7	174	1	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6320163-6320581	Cluster_1611	Pocillopora_meandrina_HIv1___Sc0000004	6320163	6320581	419	117	66	0.06837606837606838	-	UGGUGUACUAGAAUCUAACGAACAGCU	9	1	110	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6321490-6321910	Cluster_1612	Pocillopora_meandrina_HIv1___Sc0000004	6321490	6321910	421	174	84	0.764367816091954	.	UGUUCUGUGGACACAAUCGAC	20	99	10	52	9	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6357059-6357488	Cluster_1613	Pocillopora_meandrina_HIv1___Sc0000004	6357059	6357488	430	424	39	0.0023584905660377358	-	ACAACACUUGUAUUAUGCCGCUCACUCAGU	170	26	367	3	10	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6506657-6507473	Cluster_1614	Pocillopora_meandrina_HIv1___Sc0000004	6506657	6507473	817	2164	530	0.1732902033271719	-	UACUGUACCAUCUAUGAAGCCAAAGCAAUU	309	11	1889	10	16	44	194	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6507511-6507921	Cluster_1615	Pocillopora_meandrina_HIv1___Sc0000004	6507511	6507921	411	126	89	0.19047619047619047	-	UCGACUUGUUAAACUCUUCCAUCUGAGG	9	1	115	2	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6508191-6509247	Cluster_1616	Pocillopora_meandrina_HIv1___Sc0000004	6508191	6509247	1057	1206	447	0.8665008291873963	+	UGUUAACUUUAAAUCUUGGAAUUUUCA	86	18	1098	12	14	21	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6593926-6594405	Cluster_1617	Pocillopora_meandrina_HIv1___Sc0000004	6593926	6594405	480	310	142	0.9032258064516129	+	GGUGAGAGACUGUGACCGAGG	24	139	15	97	35	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6749168-6750138	Cluster_1618	Pocillopora_meandrina_HIv1___Sc0000004	6749168	6750138	971	596	170	0.6761744966442953	.	UAGGAAGAUACAAGACUACAAAUUUU	79	11	531	4	6	20	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6750183-6750612	Cluster_1619	Pocillopora_meandrina_HIv1___Sc0000004	6750183	6750612	430	313	60	0.987220447284345	+	UUAAUGCGGGAAACAGUACUAAUUACAUC	110	1	295	2	1	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6758212-6758642	Cluster_1620	Pocillopora_meandrina_HIv1___Sc0000004	6758212	6758642	431	180	55	0.9555555555555556	+	CAUUACUGGAAAGGCACUUACUGUGGAAAGU	20	2	155	1	1	1	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7204213-7204632	Cluster_1621	Pocillopora_meandrina_HIv1___Sc0000004	7204213	7204632	420	590	30	0.9966101694915255	+	UGGCCUGAAAAAAAAAAAAA	100	560	1	26	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7299894-7300321	Cluster_1622	Pocillopora_meandrina_HIv1___Sc0000004	7299894	7300321	428	186	29	0.0	-	UUAUCUUUGCCAGUUCUGACGUACUCGU	82	0	184	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7319177-7319628	Cluster_1623	Pocillopora_meandrina_HIv1___Sc0000004	7319177	7319628	452	830	187	0.29397590361445786	.	UGAUUACAUCUUCCGUCUAUUCCUGCUGGGC	118	4	796	0	2	7	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7321650-7322741	Cluster_1624	Pocillopora_meandrina_HIv1___Sc0000004	7321650	7322741	1092	3397	1071	0.8133647335884604	+	UCGUAUAGUAUGGAUCCUCGUGCAGUGA	105	29	3044	43	36	93	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7323665-7324799	Cluster_1625	Pocillopora_meandrina_HIv1___Sc0000004	7323665	7324799	1135	11814	467	0.9949212798374809	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	3174	29	11454	149	12	27	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7456533-7456962	Cluster_1626	Pocillopora_meandrina_HIv1___Sc0000004	7456533	7456962	430	421	46	0.9928741092636579	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	208	0	419	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7490373-7490802	Cluster_1627	Pocillopora_meandrina_HIv1___Sc0000004	7490373	7490802	430	353	67	1.0	+	UAAGACUGUGUAACCCAAAAAGUUUGGAGU	89	30	322	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7491734-7492158	Cluster_1628	Pocillopora_meandrina_HIv1___Sc0000004	7491734	7492158	425	105	48	0.9809523809523809	+	UAGACAAAACUCUUAAAUCCUGGAUGAAACU	15	1	98	4	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7558811-7560067	Cluster_1629	Pocillopora_meandrina_HIv1___Sc0000004	7558811	7560067	1257	4741	607	0.5161358363214512	.	UGGUAUUUUGAUUUUCUGAUCGACAAGA	773	74	4194	92	31	78	272	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7756727-7757147	Cluster_1630	Pocillopora_meandrina_HIv1___Sc0000004	7756727	7757147	421	2647	29	0.0	-	AACUUUCCGAGGUCGCGGUC	1976	2635	3	3	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7966694-7967111	Cluster_1631	Pocillopora_meandrina_HIv1___Sc0000004	7966694	7967111	418	107	38	0.056074766355140186	-	AACGGACAGCUGAACCAC	33	70	14	10	8	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8058190-8058941	Cluster_1632	Pocillopora_meandrina_HIv1___Sc0000004	8058190	8058941	752	809	237	0.9715698393077874	+	UGUGCAAUGAACGAUCUUUCCGACAGGU	67	2	785	2	2	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8059222-8060724	Cluster_1633	Pocillopora_meandrina_HIv1___Sc0000004	8059222	8060724	1503	1730	732	0.9260115606936417	+	UCUGUACAGGAAUUAUACGAAUAAUGGC	44	16	1619	7	6	17	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8410165-8410583	Cluster_1634	Pocillopora_meandrina_HIv1___Sc0000004	8410165	8410583	419	164	92	0.9085365853658537	+	GCACAGGUUAUUUCUUACGGUGGAAUCA	22	21	114	17	5	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8677285-8678021	Cluster_1635	Pocillopora_meandrina_HIv1___Sc0000004	8677285	8678021	737	3956	556	0.9825581395348837	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	752	4	3888	6	3	13	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8679145-8680346	Cluster_1636	Pocillopora_meandrina_HIv1___Sc0000004	8679145	8680346	1202	2740	887	0.8321167883211679	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	133	24	2521	15	16	37	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8680807-8681689	Cluster_1637	Pocillopora_meandrina_HIv1___Sc0000004	8680807	8681689	883	4591	737	0.8486168590720976	+	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	620	16	4367	39	11	58	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8681891-8682918	Cluster_1638	Pocillopora_meandrina_HIv1___Sc0000004	8681891	8682918	1028	4337	920	0.89255245561448	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	471	62	4047	11	25	62	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8682989-8683509	Cluster_1639	Pocillopora_meandrina_HIv1___Sc0000004	8682989	8683509	521	3642	475	0.515650741350906	.	ACAAGACAGAAUUCCAGCUGAUACAGA	489	42	3317	9	38	82	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8684868-8685298	Cluster_1640	Pocillopora_meandrina_HIv1___Sc0000004	8684868	8685298	431	1009	107	0.010901883052527254	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	588	6	979	3	0	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8685926-8686334	Cluster_1641	Pocillopora_meandrina_HIv1___Sc0000004	8685926	8686334	409	85	44	0.35294117647058826	.	AGAGACUAUUGUGAUAGUGAACAGU	12	2	81	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8686796-8688556	Cluster_1642	Pocillopora_meandrina_HIv1___Sc0000004	8686796	8688556	1761	2283	712	0.22076215505913271	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	91	13	2117	4	8	42	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8689035-8689462	Cluster_1643	Pocillopora_meandrina_HIv1___Sc0000004	8689035	8689462	428	166	67	0.012048192771084338	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	33	3	159	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8689516-8690250	Cluster_1644	Pocillopora_meandrina_HIv1___Sc0000004	8689516	8690250	735	1150	305	0.06521739130434782	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	135	8	1094	2	6	20	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8784956-8785443	Cluster_1645	Pocillopora_meandrina_HIv1___Sc0000004	8784956	8785443	488	285	51	1.0	+	UACAUCACUGCUGGCUGAACUAAUUUGAUU	88	1	282	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8818786-8819215	Cluster_1646	Pocillopora_meandrina_HIv1___Sc0000004	8818786	8819215	430	250	93	0.744	.	AUGUUGGAAAUUUGGCUGGAAUGAAGA	14	1	236	0	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8860293-8860710	Cluster_1647	Pocillopora_meandrina_HIv1___Sc0000004	8860293	8860710	418	179	121	0.01675977653631285	-	CAGGUGGUUGACCAGUAGAGU	7	40	56	26	18	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8895058-8895930	Cluster_1648	Pocillopora_meandrina_HIv1___Sc0000004	8895058	8895930	873	1433	586	0.319609211444522	.	GAAGGCUGCGUGUUCAGGUCACGUCGGGGU	82	558	470	191	59	104	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9012627-9013112	Cluster_1649	Pocillopora_meandrina_HIv1___Sc0000004	9012627	9013112	486	1032	277	0.0009689922480620155	-	CAGCUAUGAUGACAAAAGGAUU	121	100	494	91	202	45	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9015415-9015843	Cluster_1650	Pocillopora_meandrina_HIv1___Sc0000004	9015415	9015843	429	261	106	0.0	-	AUCUGUACUAUUGAGUACCUCUGAGCUG	25	34	169	26	23	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9027336-9027793	Cluster_1651	Pocillopora_meandrina_HIv1___Sc0000004	9027336	9027793	458	1158	410	0.0008635578583765112	-	CCAAUGGAUAAGGCAUCUGACUGCG	24	268	543	66	94	99	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9213473-9213903	Cluster_1652	Pocillopora_meandrina_HIv1___Sc0000004	9213473	9213903	431	307	90	0.10423452768729642	-	UAGCAGAUAUAAAUCGAGCAGGU	81	8	177	5	3	112	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9356985-9357413	Cluster_1653	Pocillopora_meandrina_HIv1___Sc0000004	9356985	9357413	429	113	41	0.9911504424778761	+	UGUGAUUGCACGUUCUAUUCUCUGUUGUAU	39	3	100	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9389236-9389665	Cluster_1654	Pocillopora_meandrina_HIv1___Sc0000004	9389236	9389665	430	251	38	0.01195219123505976	-	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	124	4	214	0	0	3	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9487258-9487685	Cluster_1655	Pocillopora_meandrina_HIv1___Sc0000004	9487258	9487685	428	174	68	1.0	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	28	0	166	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9489269-9489689	Cluster_1656	Pocillopora_meandrina_HIv1___Sc0000004	9489269	9489689	421	101	46	0.9603960396039604	+	UAUUUGCACCGUUUUUCUUGAAUAUAGA	14	2	96	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9619758-9620188	Cluster_1657	Pocillopora_meandrina_HIv1___Sc0000004	9619758	9620188	431	231	103	0.8354978354978355	+	UGACUGAUGCAUUCUUUCUUUUCCACU	12	4	217	2	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9932247-9932676	Cluster_1658	Pocillopora_meandrina_HIv1___Sc0000004	9932247	9932676	430	253	53	0.05928853754940711	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	88	5	244	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9933800-9934545	Cluster_1659	Pocillopora_meandrina_HIv1___Sc0000004	9933800	9934545	746	627	259	0.5406698564593302	.	AGCGAUUAGAAGAGCUAGACAUCAUCGAGA	93	8	575	5	7	12	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9934591-9936194	Cluster_1660	Pocillopora_meandrina_HIv1___Sc0000004	9934591	9936194	1604	4030	1164	0.38387096774193546	.	UGCAUACAUAGUUCACGUAGUCUUCUGC	211	49	3557	42	51	90	241	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9936436-9937029	Cluster_1661	Pocillopora_meandrina_HIv1___Sc0000004	9936436	9937029	594	1130	270	0.06902654867256637	-	UGAAUACAUGUAUGUCUGGAAA	131	4	862	1	134	110	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9953190-9953617	Cluster_1662	Pocillopora_meandrina_HIv1___Sc0000004	9953190	9953617	428	102	21	0.9509803921568627	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	35	0	100	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9953718-9954145	Cluster_1663	Pocillopora_meandrina_HIv1___Sc0000004	9953718	9954145	428	235	66	0.9404255319148936	+	UUGGAACGUGUUGCUGAACGCUUGUUAU	79	29	197	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10093229-10093764	Cluster_1664	Pocillopora_meandrina_HIv1___Sc0000004	10093229	10093764	536	736	199	0.6711956521739131	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	78	17	686	5	11	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10204248-10204676	Cluster_1665	Pocillopora_meandrina_HIv1___Sc0000004	10204248	10204676	429	456	105	0.9671052631578947	+	UUGGUAAUAUUUUGCUUCUCGGCUGGCU	76	0	448	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10221371-10221800	Cluster_1666	Pocillopora_meandrina_HIv1___Sc0000004	10221371	10221800	430	140	42	0.9714285714285714	+	UGAGAUGUAAACUUGUGAAUCAUUAGCACA	58	1	136	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10269151-10269644	Cluster_1667	Pocillopora_meandrina_HIv1___Sc0000004	10269151	10269644	494	698	254	0.504297994269341	.	UAUGUCAACUGUAAAUUGUCCCUUCUUUU	48	8	607	9	5	24	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10271750-10272563	Cluster_1668	Pocillopora_meandrina_HIv1___Sc0000004	10271750	10272563	814	1194	210	0.018425460636515914	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	136	6	1089	1	2	69	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10281658-10282065	Cluster_1669	Pocillopora_meandrina_HIv1___Sc0000004	10281658	10282065	408	194	117	0.9742268041237113	+	UUGGCUCUUUCACUUCGAACUGAUUUUGA	8	1	185	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10318322-10319161	Cluster_1670	Pocillopora_meandrina_HIv1___Sc0000004	10318322	10319161	840	844	229	0.8566350710900474	+	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	209	11	808	4	0	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10656026-10656455	Cluster_1671	Pocillopora_meandrina_HIv1___Sc0000004	10656026	10656455	430	225	68	0.18666666666666668	-	AUACUGAAAAACUUAAGUUACCAGAGCGUU	68	4	220	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10678085-10678496	Cluster_1672	Pocillopora_meandrina_HIv1___Sc0000004	10678085	10678496	412	146	68	1.0	+	UGUUGUCUUUCAGCUUCUUUUUCCUCUAGA	8	1	145	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10712605-10713456	Cluster_1673	Pocillopora_meandrina_HIv1___Sc0000004	10712605	10713456	852	788	239	0.09771573604060914	-	UUGGAUAAUUUUGACGAAACCAGAGACA	185	3	736	2	10	11	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10713720-10714264	Cluster_1674	Pocillopora_meandrina_HIv1___Sc0000004	10713720	10714264	545	380	163	0.8947368421052632	+	AAGGCUAGAAAGGUAUUAAAGGAAAGAUU	27	5	319	3	4	8	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10714677-10716485	Cluster_1675	Pocillopora_meandrina_HIv1___Sc0000004	10714677	10716485	1809	2032	738	0.5241141732283464	.	AGCAUACUCGAAGAACUGCAAGUUAAUGG	117	142	1779	8	21	32	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10716754-10717336	Cluster_1676	Pocillopora_meandrina_HIv1___Sc0000004	10716754	10717336	583	664	208	0.7364457831325302	.	AAGUUCAAGAUGGAUUUCAGGGCCAGAGU	88	7	627	1	2	3	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10718644-10719071	Cluster_1677	Pocillopora_meandrina_HIv1___Sc0000004	10718644	10719071	428	407	115	0.051597051597051594	-	UGUGUUCGUUGAAUGGCUCCCCAUGCG	81	4	387	1	7	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10869965-10870513	Cluster_1678	Pocillopora_meandrina_HIv1___Sc0000004	10869965	10870513	549	1932	459	0.0	-	UUGCACAGUCGGCACCGAGCAUGGC	425	224	1186	219	99	76	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10878018-10878448	Cluster_1679	Pocillopora_meandrina_HIv1___Sc0000004	10878018	10878448	431	708	211	0.026836158192090395	-	UGACUGACUGUGCUUGUGUACGAUACACGAC	72	1	675	1	4	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10878954-10879379	Cluster_1680	Pocillopora_meandrina_HIv1___Sc0000004	10878954	10879379	426	110	35	0.01818181818181818	-	UGUGUAGAUAUGUCUUUUGGACAGGA	32	0	108	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10924989-10925417	Cluster_1681	Pocillopora_meandrina_HIv1___Sc0000004	10924989	10925417	429	376	40	0.9388297872340425	+	UGUGAUGUAGAUUGCAACAUUUCGACUGC	139	12	349	3	6	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11031775-11032199	Cluster_1682	Pocillopora_meandrina_HIv1___Sc0000004	11031775	11032199	425	69	15	0.0	-	UCCGUGUGUUUGAUUGGAACAUAUUUACUC	23	0	69	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11040418-11041018	Cluster_1683	Pocillopora_meandrina_HIv1___Sc0000004	11040418	11041018	601	3200	200	0.0915625	-	UAGGUGAACCUUGCAAGUGGAUCUUUUGU	459	151	2724	15	32	40	238	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11044366-11044795	Cluster_1684	Pocillopora_meandrina_HIv1___Sc0000004	11044366	11044795	430	145	37	0.0	-	UCCGUGUGUUUGUUUGGAACAUAUUUACUC	40	5	138	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11338425-11338854	Cluster_1685	Pocillopora_meandrina_HIv1___Sc0000004	11338425	11338854	430	133	60	0.045112781954887216	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	24	0	128	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11359230-11359639	Cluster_1686	Pocillopora_meandrina_HIv1___Sc0000004	11359230	11359639	410	103	26	0.5048543689320388	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	31	0	103	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11493874-11494299	Cluster_1687	Pocillopora_meandrina_HIv1___Sc0000004	11493874	11494299	426	145	69	0.896551724137931	+	UGAGUUGCUGCUUUGGACGAAAUUUCGA	28	1	132	5	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11495868-11496292	Cluster_1688	Pocillopora_meandrina_HIv1___Sc0000004	11495868	11496292	425	179	42	0.0893854748603352	-	AAUUGUGAUUUUGUUCAUUGAAUUUAG	39	0	170	0	2	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11497691-11498133	Cluster_1689	Pocillopora_meandrina_HIv1___Sc0000004	11497691	11498133	443	1010	95	0.996039603960396	+	UGAGACUUUGAUUUUAACUGCUCUAAAAUGC	519	2	999	3	5	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11655863-11656425	Cluster_1690	Pocillopora_meandrina_HIv1___Sc0000004	11655863	11656425	563	5649	554	0.0008851124092759781	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1270	6	5612	7	9	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11656449-11658502	Cluster_1691	Pocillopora_meandrina_HIv1___Sc0000004	11656449	11658502	2054	5398	1684	0.020748425342719527	-	UCCGAUCUGUUUUCAAGGUUUUGACCACA	287	25	5109	45	48	68	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11732492-11732971	Cluster_1692	Pocillopora_meandrina_HIv1___Sc0000004	11732492	11732971	480	482	175	0.921161825726141	+	UGAGUUGCUGCUUUGGACGAAAUUUCGA	60	2	437	7	8	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11736311-11736752	Cluster_1693	Pocillopora_meandrina_HIv1___Sc0000004	11736311	11736752	442	1047	103	0.9961795606494747	+	UGAGACUUUGAUUUUAACUGCUCUAAAAUGC	544	2	1034	2	7	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11903606-11904022	Cluster_1694	Pocillopora_meandrina_HIv1___Sc0000004	11903606	11904022	417	72	8	0.013888888888888888	-	CGGCCUGAAAAAAAAAAA	56	68	1	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11950722-11951692	Cluster_1695	Pocillopora_meandrina_HIv1___Sc0000004	11950722	11951692	971	9937	1363	0.6556304719734326	.	UGCAAUCACAAUGAGCAGACAGAACUUUGC	689	153	8738	139	176	385	346	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12450173-12450798	Cluster_1696	Pocillopora_meandrina_HIv1___Sc0000004	12450173	12450798	626	555	260	0.6882882882882883	.	CUGUCUCUUAGAACACACGCCUGG	46	2	433	6	11	16	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12500684-12501113	Cluster_1697	Pocillopora_meandrina_HIv1___Sc0000004	12500684	12501113	430	377	76	0.7877984084880637	.	UAAGAUCUGAUACAUUCUUUGGCGGUGGUC	90	1	370	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12648235-12648664	Cluster_1698	Pocillopora_meandrina_HIv1___Sc0000004	12648235	12648664	430	126	53	0.9682539682539683	+	UGUUUACUUUCUUUACAACUUCGGAUACGUG	30	0	121	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12810673-12811100	Cluster_1699	Pocillopora_meandrina_HIv1___Sc0000004	12810673	12811100	428	167	49	0.011976047904191617	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	40	1	161	3	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12850438-12850857	Cluster_1700	Pocillopora_meandrina_HIv1___Sc0000004	12850438	12850857	420	257	148	0.980544747081712	+	UUAUUCAUUUUACUUCUCCU	16	87	79	27	38	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12885677-12886106	Cluster_1701	Pocillopora_meandrina_HIv1___Sc0000004	12885677	12886106	430	171	31	0.0	-	UCAACAGCCUGAACUUGUCUUCACAAGACU	51	0	170	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12979185-12979607	Cluster_1702	Pocillopora_meandrina_HIv1___Sc0000004	12979185	12979607	423	87	36	0.04597701149425287	-	UAGGUUCUUCCGACUUCAUUCCUGUAGC	25	0	84	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13474919-13475385	Cluster_1703	Pocillopora_meandrina_HIv1___Sc0000004	13474919	13475385	467	593	162	0.9409780775716695	+	UGUUCUCUAUCAGGUACACGGACAGGAU	38	10	558	2	5	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13494281-13494708	Cluster_1704	Pocillopora_meandrina_HIv1___Sc0000004	13494281	13494708	428	172	39	0.9883720930232558	+	UGGACGGUUCAACUCCGAGACUUUGC	41	1	169	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13496622-13497815	Cluster_1705	Pocillopora_meandrina_HIv1___Sc0000004	13496622	13497815	1194	3311	907	0.24161884627000907	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	657	35	2945	18	157	58	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13499231-13501214	Cluster_1706	Pocillopora_meandrina_HIv1___Sc0000004	13499231	13501214	1984	4697	1425	0.7836917181179476	.	UUACGAAAUAUCUGAUGGCUGAUC	227	45	3988	39	45	140	440	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13564132-13565479	Cluster_1707	Pocillopora_meandrina_HIv1___Sc0000004	13564132	13565479	1348	31249	2235	0.9927677685685942	+	UUGGAAUGUGUUACUGAAUGCUUGUUACA	2524	409	30281	56	127	209	167	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13565828-13566247	Cluster_1708	Pocillopora_meandrina_HIv1___Sc0000004	13565828	13566247	420	170	72	0.9764705882352941	+	UCUGGUACAUUUCAUAAAUCUGUGGUCUCC	32	6	155	1	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13566431-13567156	Cluster_1709	Pocillopora_meandrina_HIv1___Sc0000004	13566431	13567156	726	764	254	1.0	+	UUUUAUCUUGAGCAUACACUUAUCUACUGU	59	0	722	4	7	23	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13567324-13567893	Cluster_1710	Pocillopora_meandrina_HIv1___Sc0000004	13567324	13567893	570	4054	606	0.631228416378885	.	UACGUCUGGCCAGCAAUCAACAUCGUC	601	69	3539	72	43	122	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13569155-13569583	Cluster_1711	Pocillopora_meandrina_HIv1___Sc0000004	13569155	13569583	429	467	129	0.9700214132762313	+	UGUAGAAUCAAUCUGUUACUAAGACACC	101	2	438	16	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13570374-13570775	Cluster_1712	Pocillopora_meandrina_HIv1___Sc0000004	13570374	13570775	402	182	114	0.8351648351648352	+	UACUUCUAACAGCGUUUCUUUUAGCUCU	8	5	158	3	3	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13572742-13574934	Cluster_1713	Pocillopora_meandrina_HIv1___Sc0000004	13572742	13574934	2193	4036	1214	0.9806739345887017	+	UAGGACGUACGUAUAGACCUUUUCUUGAAA	205	41	3880	15	30	32	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13574985-13576253	Cluster_1714	Pocillopora_meandrina_HIv1___Sc0000004	13574985	13576253	1269	7807	1191	0.9733572434994235	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1544	63	7467	16	69	106	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13577716-13578146	Cluster_1715	Pocillopora_meandrina_HIv1___Sc0000004	13577716	13578146	431	283	81	0.9893992932862191	+	UGCUCUUCAUUUUUGUUGUUGGUUGAACAC	99	3	276	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13579375-13579803	Cluster_1716	Pocillopora_meandrina_HIv1___Sc0000004	13579375	13579803	429	204	84	1.0	+	UAAGCUGUGUUUCCUGAUCUGUUAAAUUGC	24	6	194	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13581537-13582766	Cluster_1717	Pocillopora_meandrina_HIv1___Sc0000004	13581537	13582766	1230	1047	363	0.8662846227316141	+	UGCGAUCCAAAGUAGAAGAAAAUUUAUU	62	4	966	5	7	20	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13583661-13584178	Cluster_1718	Pocillopora_meandrina_HIv1___Sc0000004	13583661	13584178	518	5688	370	0.999648382559775	+	UAUCUUUGCCAGUUCUGACGUACUCGCAC	1002	28	5611	4	10	24	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13587138-13587564	Cluster_1719	Pocillopora_meandrina_HIv1___Sc0000004	13587138	13587564	427	123	44	1.0	+	UGUUAUCACCAGGCCUUGCACGACAUCUGC	38	5	113	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13590586-13591013	Cluster_1720	Pocillopora_meandrina_HIv1___Sc0000004	13590586	13591013	428	236	126	0.9830508474576272	+	UACUGUUUGAAACCGGCUUGUUUACUCA	22	5	224	2	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13591093-13591520	Cluster_1721	Pocillopora_meandrina_HIv1___Sc0000004	13591093	13591520	428	174	68	0.9425287356321839	+	UGCUCGACCUUUGCAACACCAAUUUGUUU	33	7	165	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13592684-13593098	Cluster_1722	Pocillopora_meandrina_HIv1___Sc0000004	13592684	13593098	415	183	100	0.8961748633879781	+	UGAGUAUGUCGCGCUCCGUCCUGACGAAG	28	11	163	5	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13597761-13598295	Cluster_1723	Pocillopora_meandrina_HIv1___Sc0000004	13597761	13598295	535	264	121	1.0	+	UGGACUUUAAACUGCAGAUCUGAUUGUUUC	12	1	235	1	9	16	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13598565-13599175	Cluster_1724	Pocillopora_meandrina_HIv1___Sc0000004	13598565	13599175	611	552	215	0.9963768115942029	+	UUGGAUUUUUGUGUGGUUGAGACCAAGACA	83	7	528	3	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13599546-13600020	Cluster_1725	Pocillopora_meandrina_HIv1___Sc0000004	13599546	13600020	475	351	149	0.9772079772079773	+	UAUGAUCACGUUGUUCCUCUUGGACCUG	27	5	336	1	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13600817-13601256	Cluster_1726	Pocillopora_meandrina_HIv1___Sc0000004	13600817	13601256	440	383	128	1.0	+	UCCAUUUCCUGUAGCAAAAUUAAGCUGG	50	3	369	1	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13602729-13603149	Cluster_1727	Pocillopora_meandrina_HIv1___Sc0000004	13602729	13603149	421	201	102	1.0	+	UGAAAUCUUGAGGGUCAUGUCUGAUACUG	23	2	194	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13603945-13604530	Cluster_1728	Pocillopora_meandrina_HIv1___Sc0000004	13603945	13604530	586	433	200	1.0	+	UGAAUUCCACAAGUGCCUGUAAGAAGUGGC	24	6	403	5	6	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13605193-13605593	Cluster_1729	Pocillopora_meandrina_HIv1___Sc0000004	13605193	13605593	401	235	107	0.9957446808510638	+	UGAUAUCAAACUGGUGUAAAGACUGGAA	30	4	225	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13606418-13606902	Cluster_1730	Pocillopora_meandrina_HIv1___Sc0000004	13606418	13606902	485	597	159	0.964824120603015	+	UUAUCAGUAUCUUCAAAGUUUGUCAUCAAG	166	4	584	2	5	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13608188-13608970	Cluster_1731	Pocillopora_meandrina_HIv1___Sc0000004	13608188	13608970	783	451	195	0.328159645232816	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	41	26	369	12	16	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13613398-13614371	Cluster_1732	Pocillopora_meandrina_HIv1___Sc0000004	13613398	13614371	974	1024	270	0.9716796875	+	UAUCGCUAUGAAUAUUUGAAACGUUUUUCAU	96	5	1007	1	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13617463-13617895	Cluster_1733	Pocillopora_meandrina_HIv1___Sc0000004	13617463	13617895	433	305	101	0.9606557377049181	+	UACGUGUAGAAAGCCUUCUCUGACAUC	30	1	292	0	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13618974-13619562	Cluster_1734	Pocillopora_meandrina_HIv1___Sc0000004	13618974	13619562	589	716	330	0.9078212290502793	+	UAAUGAAGUCGUAAUUUGUCCAUCC	85	10	672	0	15	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13620022-13620730	Cluster_1735	Pocillopora_meandrina_HIv1___Sc0000004	13620022	13620730	709	11012	594	0.9925535779150018	+	UUAAAGGGGAAGACAAUACAUCUGUGUGA	2201	14	10932	6	4	18	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13621026-13621760	Cluster_1736	Pocillopora_meandrina_HIv1___Sc0000004	13621026	13621760	735	10320	1023	0.975	+	UGUGACAGCUCCUUUCCUCUUGCAAAG	916	110	9145	744	114	64	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13634452-13634859	Cluster_1737	Pocillopora_meandrina_HIv1___Sc0000004	13634452	13634859	408	260	152	0.7230769230769231	.	UUUACACCGGCUCUUGUUACCAUUUGG	8	1	249	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13636486-13637031	Cluster_1738	Pocillopora_meandrina_HIv1___Sc0000004	13636486	13637031	546	808	182	0.8985148514851485	+	UUGGAAAAAUCUGCUGUAAUUUGCUGC	252	2	770	3	5	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13638185-13638614	Cluster_1739	Pocillopora_meandrina_HIv1___Sc0000004	13638185	13638614	430	92	20	0.17391304347826086	-	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	52	2	88	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13638673-13639097	Cluster_1740	Pocillopora_meandrina_HIv1___Sc0000004	13638673	13639097	425	246	125	1.0	+	UGCAAUGUUUUUCGGCGUGUUGGGACGGU	17	3	236	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13639479-13639907	Cluster_1741	Pocillopora_meandrina_HIv1___Sc0000004	13639479	13639907	429	379	112	0.9472295514511874	+	UUCGAGCUAUCACUGAAAGAGGGAGUGGU	83	6	349	3	5	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13641818-13642307	Cluster_1742	Pocillopora_meandrina_HIv1___Sc0000004	13641818	13642307	490	713	159	0.8246844319775596	+	UUCUGCUUGCACCGUGACUCUGCAUGGC	108	3	674	1	1	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13642615-13644807	Cluster_1743	Pocillopora_meandrina_HIv1___Sc0000004	13642615	13644807	2193	24743	2798	0.9628177666410702	+	UAGCGUAUUACAGAAAAAAGAAAACAGAGU	1381	216	23447	276	124	220	460	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13646345-13646768	Cluster_1744	Pocillopora_meandrina_HIv1___Sc0000004	13646345	13646768	424	182	91	1.0	+	UGUUGUGUUCUUCAUCUGAUGUAUCGUC	20	3	171	0	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13648557-13648986	Cluster_1745	Pocillopora_meandrina_HIv1___Sc0000004	13648557	13648986	430	147	23	1.0	+	UUGACGACUUGUAACUUAAACUUGAAUAUU	101	0	146	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13655327-13655729	Cluster_1746	Pocillopora_meandrina_HIv1___Sc0000004	13655327	13655729	403	170	78	0.8588235294117647	+	UAACACAAUGAACCAAGGCACGUCCAGAUA	17	2	147	3	2	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13659082-13659494	Cluster_1747	Pocillopora_meandrina_HIv1___Sc0000004	13659082	13659494	413	114	49	0.8157894736842105	+	UACGUGUAGACUGAGCCAUUGCCUAGU	19	1	101	2	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13659908-13661023	Cluster_1748	Pocillopora_meandrina_HIv1___Sc0000004	13659908	13661023	1116	1334	435	0.8163418290854573	+	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	106	12	1246	2	7	21	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13664298-13664728	Cluster_1749	Pocillopora_meandrina_HIv1___Sc0000004	13664298	13664728	431	231	50	1.0	+	UUGGAACACUACAAGACUACUGAGCUCUUGU	101	0	231	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13665700-13666634	Cluster_1750	Pocillopora_meandrina_HIv1___Sc0000004	13665700	13666634	935	1692	263	0.9976359338061466	+	UUUGUUGUGUUUUUUGAUCGUGGGCAUC	341	3	1678	1	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13667018-13667446	Cluster_1751	Pocillopora_meandrina_HIv1___Sc0000004	13667018	13667446	429	371	119	0.9919137466307277	+	UGUAACAAAGAAGUACUACUGAUCACAUU	55	3	362	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13668475-13668891	Cluster_1752	Pocillopora_meandrina_HIv1___Sc0000004	13668475	13668891	417	81	39	0.9629629629629629	+	UGGAACUUCUCGCUCAUCCACAAUCUAUG	22	1	78	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13669366-13671054	Cluster_1753	Pocillopora_meandrina_HIv1___Sc0000004	13669366	13671054	1689	8837	1479	0.9205612764512844	+	UGUAACUUUGAGCUUCUUUUUUGCAGGA	1392	38	8503	31	45	91	129	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13673694-13674124	Cluster_1754	Pocillopora_meandrina_HIv1___Sc0000004	13673694	13674124	431	253	96	0.9762845849802372	+	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	47	1	243	1	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13674660-13675102	Cluster_1755	Pocillopora_meandrina_HIv1___Sc0000004	13674660	13675102	443	421	163	0.9596199524940617	+	UAAAGUCUGUGUCAUUUUGAAGGAACGUGU	40	0	401	0	3	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13684665-13685570	Cluster_1756	Pocillopora_meandrina_HIv1___Sc0000004	13684665	13685570	906	1680	530	0.9940476190476191	+	UAAGACAAGUACUUCAAACACUCUCUAGUAG	190	11	1615	6	9	12	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13685593-13686075	Cluster_1757	Pocillopora_meandrina_HIv1___Sc0000004	13685593	13686075	483	438	235	0.9657534246575342	+	UGAUUUUUGUUCUUUUUGUUGAGGCUGCAA	22	2	420	0	1	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13686352-13687756	Cluster_1758	Pocillopora_meandrina_HIv1___Sc0000004	13686352	13687756	1405	5475	979	0.9930593607305936	+	UUGUAACUGCGAUCGUUCUUUGGAGC	316	16	5116	15	115	136	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13694373-13695079	Cluster_1759	Pocillopora_meandrina_HIv1___Sc0000004	13694373	13695079	707	551	217	0.9745916515426497	+	UAGGCUCGUGUGCACAACAACUGUACAGC	27	2	537	0	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13698678-13699095	Cluster_1760	Pocillopora_meandrina_HIv1___Sc0000004	13698678	13699095	418	219	41	1.0	+	AUCCCACUCCUGACACCA	124	198	20	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13700023-13700732	Cluster_1761	Pocillopora_meandrina_HIv1___Sc0000004	13700023	13700732	710	766	107	1.0	+	UGAAUGCUCGUUGCUCGACUGAUUGUAC	106	2	755	4	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13727111-13727724	Cluster_1762	Pocillopora_meandrina_HIv1___Sc0000004	13727111	13727724	614	666	226	0.6966966966966966	.	UUCGGCAAAAACUAAAAGCGGGCGAAGA	158	2	621	3	0	3	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13999965-14000673	Cluster_1763	Pocillopora_meandrina_HIv1___Sc0000004	13999965	14000673	709	269	85	0.08550185873605948	-	UGAUGCAAUCUGUUUCUGCAUGAGGGC	52	3	245	3	3	14	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14003220-14003636	Cluster_1764	Pocillopora_meandrina_HIv1___Sc0000004	14003220	14003636	417	86	25	0.08139534883720931	-	CGGCCUGAAAAAAAAAAA	45	73	3	6	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14004713-14005502	Cluster_1765	Pocillopora_meandrina_HIv1___Sc0000004	14004713	14005502	790	1722	300	0.9529616724738676	+	UUUGAUAUAAAGGUUGUGGAAAAACAGU	130	10	1653	6	6	26	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14017575-14018003	Cluster_1766	Pocillopora_meandrina_HIv1___Sc0000004	14017575	14018003	429	98	18	0.9897959183673469	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	52	0	97	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14021015-14021442	Cluster_1767	Pocillopora_meandrina_HIv1___Sc0000004	14021015	14021442	428	111	31	0.2882882882882883	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	42	3	105	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14041691-14042119	Cluster_1768	Pocillopora_meandrina_HIv1___Sc0000004	14041691	14042119	429	108	23	0.0	-	UGAGUUCUACUGUAACGACUGAAUAGACU	43	0	104	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14102640-14104377	Cluster_1769	Pocillopora_meandrina_HIv1___Sc0000004	14102640	14104377	1738	7186	1464	0.03019760645699972	-	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	942	36	6930	17	44	84	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14111260-14111688	Cluster_1770	Pocillopora_meandrina_HIv1___Sc0000004	14111260	14111688	429	737	132	0.9443690637720489	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	267	2	725	1	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14385956-14386385	Cluster_1771	Pocillopora_meandrina_HIv1___Sc0000004	14385956	14386385	430	1246	46	0.0008025682182985554	-	GGGGUGGACUGUGUUCCAGAAAAGACUGG	384	18	1075	6	137	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14397905-14398333	Cluster_1772	Pocillopora_meandrina_HIv1___Sc0000004	14397905	14398333	429	135	56	0.9925925925925926	+	UGAAACCGAAGACCUGCUAGUAUUUUUGC	39	4	130	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14404359-14404781	Cluster_1773	Pocillopora_meandrina_HIv1___Sc0000004	14404359	14404781	423	95	27	1.0	+	UACGUCUAAAGGAUCUGAAUAUUCAUCAUC	27	1	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14405011-14406046	Cluster_1774	Pocillopora_meandrina_HIv1___Sc0000004	14405011	14406046	1036	1232	588	0.635551948051948	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	71	28	1086	9	14	24	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14407135-14407747	Cluster_1775	Pocillopora_meandrina_HIv1___Sc0000004	14407135	14407747	613	605	272	0.15041322314049588	-	UUCCUGCACCAUUGCAUGUUAACUUCUGC	73	9	538	3	2	6	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14411244-14411670	Cluster_1776	Pocillopora_meandrina_HIv1___Sc0000004	14411244	14411670	427	237	109	1.0	+	UGCUUUCUUGGUCUAGGGUUACUCACUA	29	4	232	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14426820-14427248	Cluster_1777	Pocillopora_meandrina_HIv1___Sc0000004	14426820	14427248	429	157	45	1.0	+	UGUUUACUGGUGACUGAAGGAGAACUGGU	69	2	153	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14428694-14429347	Cluster_1778	Pocillopora_meandrina_HIv1___Sc0000004	14428694	14429347	654	598	204	0.9949832775919732	+	UGUCAGAACUGUCUUCGCUUGUAGAAAC	51	7	579	2	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14456143-14456570	Cluster_1779	Pocillopora_meandrina_HIv1___Sc0000004	14456143	14456570	428	128	37	0.953125	+	AGAGUACCCCAAAACCGCCUGACUAGUUGC	33	4	108	2	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14459119-14459655	Cluster_1780	Pocillopora_meandrina_HIv1___Sc0000004	14459119	14459655	537	442	146	0.9705882352941176	+	UUUCUCUUCUGAAUGUUGAUUAUAAUAUUUC	44	32	362	19	3	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14482156-14482583	Cluster_1781	Pocillopora_meandrina_HIv1___Sc0000004	14482156	14482583	428	198	76	0.020202020202020204	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	33	5	183	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14486814-14487231	Cluster_1782	Pocillopora_meandrina_HIv1___Sc0000004	14486814	14487231	418	88	37	0.8977272727272727	+	GCCGAUCCCAGAAUUUGACGUAAAAUUCA	25	2	83	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14507848-14509126	Cluster_1783	Pocillopora_meandrina_HIv1___Sc0000004	14507848	14509126	1279	14107	1373	0.9417310555043595	+	UUUUAACACUCUUGACUGCAUCUUUGC	1898	29	13379	16	27	73	583	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14517602-14518021	Cluster_1784	Pocillopora_meandrina_HIv1___Sc0000004	14517602	14518021	420	173	27	0.0	-	CAUGGGUUGGAUUAGGUCUG	27	112	4	20	25	12	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14519757-14520179	Cluster_1785	Pocillopora_meandrina_HIv1___Sc0000004	14519757	14520179	423	104	53	1.0	+	UAUCGCUUGGCAGUUUCCACACUGACA	14	1	90	2	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14564791-14565391	Cluster_1786	Pocillopora_meandrina_HIv1___Sc0000004	14564791	14565391	601	830	439	0.3240963855421687	.	UUAAAAAGACGAGCUCGACG	38	442	37	264	55	27	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14565484-14565919	Cluster_1787	Pocillopora_meandrina_HIv1___Sc0000004	14565484	14565919	436	324	141	0.018518518518518517	-	CAAGUGUAGUAUCUGUUCC	36	87	178	1	20	23	15	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000004:14566036-14566562	Cluster_1788	Pocillopora_meandrina_HIv1___Sc0000004	14566036	14566562	527	46227	1886	0.999783676206546	+	UGGGAAUACCCCGUGUUGUAGGCUU	3873	10695	18729	1965	3377	6731	4730	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14567165-14567723	Cluster_1789	Pocillopora_meandrina_HIv1___Sc0000004	14567165	14567723	559	2022	544	0.0034619188921859545	-	CGUUCGCGCUCGUCCCCGC	452	1178	289	208	199	95	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14578808-14579344	Cluster_1790	Pocillopora_meandrina_HIv1___Sc0000004	14578808	14579344	537	17106	1965	0.000759967262948673	-	AAACUGAUUUUUGGAACUGGGCU	535	1815	9634	757	1397	1970	1533	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:31376-31900	Cluster_1791	Pocillopora_meandrina_HIv1___Sc0000005	31376	31900	525	4300	670	0.019302325581395347	-	AUAAGGACGAGAAAAGUCUUCGGACU	476	616	2610	230	169	281	394	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:195163-196858	Cluster_1792	Pocillopora_meandrina_HIv1___Sc0000005	195163	196858	1696	2109	893	0.9492650545282124	+	UGAUUUCCUCUCUGACAUCUAAAGGU	55	22	1952	9	22	41	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:246548-247012	Cluster_1793	Pocillopora_meandrina_HIv1___Sc0000005	246548	247012	465	670	243	0.0	-	ACGCAUGUCAAAUGAGAAGUAACAAGAC	128	28	480	30	33	28	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:356378-356805	Cluster_1794	Pocillopora_meandrina_HIv1___Sc0000005	356378	356805	428	263	138	0.870722433460076	+	UAAAUCUCGCGGCUCCAAUGUGAAUGUC	13	4	244	0	2	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:361424-361859	Cluster_1795	Pocillopora_meandrina_HIv1___Sc0000005	361424	361859	436	251	96	0.06772908366533864	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	43	0	232	1	1	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:363136-363572	Cluster_1796	Pocillopora_meandrina_HIv1___Sc0000005	363136	363572	437	780	223	0.047435897435897434	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	143	5	745	1	1	9	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:363915-364343	Cluster_1797	Pocillopora_meandrina_HIv1___Sc0000005	363915	364343	429	651	169	0.013824884792626729	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	176	1	634	0	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:601572-601666	Cluster_1798	Pocillopora_meandrina_HIv1___Sc0000005	601572	601666	95	129412	404	1.0	+	AAAGAAGUACAAGUGGUAGGG	43823	39966	4	68299	20903	235	5	N	Y	nve-miR-2023-3p
Pocillopora_meandrina_HIv1___Sc0000005:669643-670068	Cluster_1799	Pocillopora_meandrina_HIv1___Sc0000005	669643	670068	426	88	33	0.022727272727272728	-	UUUCUUGAUCAAUUUGUGAAUGUCUGCA	12	2	83	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:677665-678093	Cluster_1800	Pocillopora_meandrina_HIv1___Sc0000005	677665	678093	429	278	86	0.0035971223021582736	-	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	68	1	269	2	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:678163-679515	Cluster_1801	Pocillopora_meandrina_HIv1___Sc0000005	678163	679515	1353	3985	603	0.0027603513174404015	-	UGAUUAAAAGUUCUGUUAAAUUAUCUGAU	720	14	3909	12	12	17	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:855676-856094	Cluster_1802	Pocillopora_meandrina_HIv1___Sc0000005	855676	856094	419	164	23	0.9878048780487805	+	CGGCCUGAAAAAAAAAAA	76	145	2	13	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:928036-928463	Cluster_1803	Pocillopora_meandrina_HIv1___Sc0000005	928036	928463	428	384	235	0.9947916666666666	+	CAGUAGCUGAACUCUCAUAUGAGCACGU	18	52	221	26	19	31	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1117149-1117569	Cluster_1804	Pocillopora_meandrina_HIv1___Sc0000005	1117149	1117569	421	124	39	0.8951612903225806	+	UUUCGUGCUCUAGCCGCUUCA	60	14	6	88	14	2	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1320566-1320979	Cluster_1805	Pocillopora_meandrina_HIv1___Sc0000005	1320566	1320979	414	254	180	1.0	+	AAACGCGAGUAGGACAAAGUUCU	7	54	126	12	24	15	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1509568-1510441	Cluster_1806	Pocillopora_meandrina_HIv1___Sc0000005	1509568	1510441	874	562	275	0.08362989323843416	-	UGAUAACUGUACUCUUGAAAUUCAUCG	21	8	534	4	0	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1513099-1513526	Cluster_1807	Pocillopora_meandrina_HIv1___Sc0000005	1513099	1513526	428	85	18	0.023529411764705882	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	22	1	83	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1729005-1729479	Cluster_1808	Pocillopora_meandrina_HIv1___Sc0000005	1729005	1729479	475	559	157	0.03935599284436494	-	UCCUAUGGUCGAUGCCUUCUGAGACAGU	65	4	535	3	2	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1897926-1898403	Cluster_1809	Pocillopora_meandrina_HIv1___Sc0000005	1897926	1898403	478	328	209	0.0	-	CCGUGACUGCAGCAGAGU	19	108	135	27	26	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1899461-1900301	Cluster_1810	Pocillopora_meandrina_HIv1___Sc0000005	1899461	1900301	841	547	323	0.0	-	CUCUGGAUCGGAGUGACA	28	179	211	56	39	32	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2281461-2281909	Cluster_1811	Pocillopora_meandrina_HIv1___Sc0000005	2281461	2281909	449	959	175	0.9958289885297185	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	363	29	880	17	14	15	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2310589-2311019	Cluster_1812	Pocillopora_meandrina_HIv1___Sc0000005	2310589	2311019	431	299	139	0.0	-	GAAUGUCCUUACUACGGUUGCUGAAA	20	70	163	21	17	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2352438-2352863	Cluster_1813	Pocillopora_meandrina_HIv1___Sc0000005	2352438	2352863	426	92	39	0.0	-	UUUUCCUGGGCUCGCAGCUUUCUCUGUU	8	0	88	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2391497-2391925	Cluster_1814	Pocillopora_meandrina_HIv1___Sc0000005	2391497	2391925	429	181	65	0.994475138121547	+	AGGACAAACAAGACCUGAAACGGAAAGGA	44	7	161	2	5	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2579073-2579495	Cluster_1815	Pocillopora_meandrina_HIv1___Sc0000005	2579073	2579495	423	157	79	0.9044585987261147	+	UACGUUCGUCUUGAGACAUCUCUGUCUUG	11	1	147	3	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2776669-2777096	Cluster_1816	Pocillopora_meandrina_HIv1___Sc0000005	2776669	2777096	428	509	68	0.9980353634577603	+	AGCCAACGUGACCACAAACAAAGACGAC	130	1	492	6	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2785318-2785746	Cluster_1817	Pocillopora_meandrina_HIv1___Sc0000005	2785318	2785746	429	268	105	0.15671641791044777	-	UGUCUUCACGAAUCUGCAGUUGAAAUUUC	67	8	208	8	14	25	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2843759-2844187	Cluster_1818	Pocillopora_meandrina_HIv1___Sc0000005	2843759	2844187	429	543	63	0.996316758747698	+	AGCCAACGUGACCACAAACAAAGACGAC	146	0	523	5	3	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2976195-2976612	Cluster_1819	Pocillopora_meandrina_HIv1___Sc0000005	2976195	2976612	418	779	18	1.0	+	CUUAGGGUGCUGUCGGCA	688	779	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3377636-3378055	Cluster_1820	Pocillopora_meandrina_HIv1___Sc0000005	3377636	3378055	420	164	10	1.0	+	CAGCGGAACCUUAGGAUCUG	74	152	0	9	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3564984-3565412	Cluster_1821	Pocillopora_meandrina_HIv1___Sc0000005	3564984	3565412	429	1606	119	0.9806973848069739	+	UACUAAGUAGGUACCUUCGAGAUGUUUA	381	32	1513	4	3	7	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3590785-3593852	Cluster_1822	Pocillopora_meandrina_HIv1___Sc0000005	3590785	3593852	3068	12187	2066	0.038319520800853366	-	UGAGAAUUCUGGAAUUUAUGACAACUCC	722	95	11436	69	185	174	228	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3596796-3597487	Cluster_1823	Pocillopora_meandrina_HIv1___Sc0000005	3596796	3597487	692	596	246	0.0016778523489932886	-	UCUAUUAACUUUUUGGCGUGUCUCUGUAUU	42	13	559	3	3	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3598205-3598779	Cluster_1824	Pocillopora_meandrina_HIv1___Sc0000005	3598205	3598779	575	980	299	0.17653061224489797	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	139	2	925	2	2	22	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3599005-3600832	Cluster_1825	Pocillopora_meandrina_HIv1___Sc0000005	3599005	3600832	1828	3357	841	0.21388144176347929	.	UACUUCGUUAAGCUUCGUGAGAUCCACA	234	34	3059	32	78	49	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3602848-3603277	Cluster_1826	Pocillopora_meandrina_HIv1___Sc0000005	3602848	3603277	430	79	21	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	23	0	79	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3604130-3604811	Cluster_1827	Pocillopora_meandrina_HIv1___Sc0000005	3604130	3604811	682	265	151	0.08679245283018867	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	18	3	243	5	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3605250-3605666	Cluster_1828	Pocillopora_meandrina_HIv1___Sc0000005	3605250	3605666	417	115	57	0.034782608695652174	-	UAUAACGUAAACUGGUCUCCCUUCGAUUCC	17	3	109	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3607300-3607726	Cluster_1829	Pocillopora_meandrina_HIv1___Sc0000005	3607300	3607726	427	272	124	0.003676470588235294	-	UUCAGCUGAGGCUCUUUCAUCUAAUUGU	23	4	256	0	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3711070-3711552	Cluster_1830	Pocillopora_meandrina_HIv1___Sc0000005	3711070	3711552	483	3564	148	0.9691358024691358	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	1304	8	3546	5	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3731078-3731507	Cluster_1831	Pocillopora_meandrina_HIv1___Sc0000005	3731078	3731507	430	182	40	0.9945054945054945	+	UGACUGGUCAACAAAUGGAAAGCGAAUUGU	100	2	174	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3823465-3824086	Cluster_1832	Pocillopora_meandrina_HIv1___Sc0000005	3823465	3824086	622	353	73	0.09915014164305949	-	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	133	2	330	1	1	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3824912-3825341	Cluster_1833	Pocillopora_meandrina_HIv1___Sc0000005	3824912	3825341	430	552	62	0.9601449275362319	+	AUGUAGAGUGUCUUUAUUAAAUUCAAUAUG	175	32	485	10	1	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3825568-3826032	Cluster_1834	Pocillopora_meandrina_HIv1___Sc0000005	3825568	3826032	465	182	67	0.4065934065934066	.	AAAUCAUGGAGAGGAACUGUUCAUU	30	1	154	11	4	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3880254-3880902	Cluster_1835	Pocillopora_meandrina_HIv1___Sc0000005	3880254	3880902	649	1101	198	0.9990917347865577	+	UUUGCAGGAAAUGUAAUUGAAAGGAAACA	202	7	1074	1	2	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3881011-3881439	Cluster_1836	Pocillopora_meandrina_HIv1___Sc0000005	3881011	3881439	429	233	68	0.9785407725321889	+	UCUUCAGUGUUUGUAACUUCUCUUUUUAC	76	2	230	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3896583-3897262	Cluster_1837	Pocillopora_meandrina_HIv1___Sc0000005	3896583	3897262	680	699	217	0.977110157367668	+	UGUGAAUUUACUGACCAUCUCGACAUUG	73	8	671	1	6	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3925759-3926829	Cluster_1838	Pocillopora_meandrina_HIv1___Sc0000005	3925759	3926829	1071	1608	638	0.8041044776119403	+	UCUAACGCGUUUGUCUGACAUCCCUUU	152	40	1423	14	36	22	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3928754-3929175	Cluster_1839	Pocillopora_meandrina_HIv1___Sc0000005	3928754	3929175	422	170	83	1.0	+	UGUACAAGGUAGAAUUGAAAAUUAAAGACA	12	4	163	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3933852-3934265	Cluster_1840	Pocillopora_meandrina_HIv1___Sc0000005	3933852	3934265	414	128	80	0.984375	+	UGAAACCUUGUCUUUCGACUCGUAUUGUGG	9	3	121	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3935142-3935568	Cluster_1841	Pocillopora_meandrina_HIv1___Sc0000005	3935142	3935568	427	141	53	1.0	+	UCUUUGUGCUCUUCUGGAGGUAUGUUC	23	1	137	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3935694-3938335	Cluster_1842	Pocillopora_meandrina_HIv1___Sc0000005	3935694	3938335	2642	9017	1888	0.9925695907729843	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1269	18	8829	20	31	38	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3938633-3939270	Cluster_1843	Pocillopora_meandrina_HIv1___Sc0000005	3938633	3939270	638	389	150	1.0	+	UUGGCUAUGUGAACUCUCUCUACUUUGGU	16	5	365	0	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3939665-3941351	Cluster_1844	Pocillopora_meandrina_HIv1___Sc0000005	3939665	3941351	1687	3684	943	0.998642779587405	+	GUCCCGUCGGAGGUGCCA	368	518	3127	10	8	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3942222-3942629	Cluster_1845	Pocillopora_meandrina_HIv1___Sc0000005	3942222	3942629	408	122	81	1.0	+	UGGAAUAGACAAGGACCGAUGAGGGGGC	8	1	115	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3946380-3946949	Cluster_1846	Pocillopora_meandrina_HIv1___Sc0000005	3946380	3946949	570	404	135	0.9975247524752475	+	UCAAGAUCUACUACUGUGUGAAAUAAAGCGU	58	7	387	3	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3947796-3948223	Cluster_1847	Pocillopora_meandrina_HIv1___Sc0000005	3947796	3948223	428	226	92	0.911504424778761	+	UGUAGCAUUCUUUACAAAAGUCUUCAGGA	35	11	212	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3950517-3950941	Cluster_1848	Pocillopora_meandrina_HIv1___Sc0000005	3950517	3950941	425	137	58	1.0	+	UGCAAUGCUUUCGACAUCUGACUUGAUUUC	34	0	135	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3954119-3954996	Cluster_1849	Pocillopora_meandrina_HIv1___Sc0000005	3954119	3954996	878	614	230	1.0	+	UCAUCCUUGAAAACUGUCUUGAUAAGAGC	83	5	596	0	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3960917-3961344	Cluster_1850	Pocillopora_meandrina_HIv1___Sc0000005	3960917	3961344	428	213	79	0.9389671361502347	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	89	0	205	0	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3963376-3963785	Cluster_1851	Pocillopora_meandrina_HIv1___Sc0000005	3963376	3963785	410	337	188	0.7507418397626113	.	UGUUCUUUCUCUGCUGUAAUAUAUGGC	21	3	272	4	11	12	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3963938-3964346	Cluster_1852	Pocillopora_meandrina_HIv1___Sc0000005	3963938	3964346	409	220	147	0.7909090909090909	.	UCAAUUACUGGCUUUUCUGCUAAAACAUAGC	9	8	196	1	4	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3964521-3965020	Cluster_1853	Pocillopora_meandrina_HIv1___Sc0000005	3964521	3965020	500	277	129	0.7364620938628159	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	33	8	244	3	4	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3998294-3998765	Cluster_1854	Pocillopora_meandrina_HIv1___Sc0000005	3998294	3998765	472	520	167	0.7519230769230769	.	UGCUCAUCGUUCGAAUGCUUCUCUGAAGCUU	112	2	469	2	3	6	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4004547-4006095	Cluster_1855	Pocillopora_meandrina_HIv1___Sc0000005	4004547	4006095	1549	8612	1187	0.9745703669298653	+	UGUAUUUCGCUGGAUGGCCCAUUGGUGCCC	617	91	8144	62	30	92	193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4006299-4007192	Cluster_1856	Pocillopora_meandrina_HIv1___Sc0000005	4006299	4007192	894	650	350	0.8046153846153846	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	26	48	480	40	29	29	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4007731-4008772	Cluster_1857	Pocillopora_meandrina_HIv1___Sc0000005	4007731	4008772	1042	892	392	0.9663677130044843	+	UAACAUCUCUCUUUCCGACUUUAACAGC	59	9	847	5	2	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4008910-4009338	Cluster_1858	Pocillopora_meandrina_HIv1___Sc0000005	4008910	4009338	429	256	104	0.96875	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	85	4	245	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4009354-4010931	Cluster_1859	Pocillopora_meandrina_HIv1___Sc0000005	4009354	4010931	1578	1723	789	0.8879860708067324	+	UGAUAAGCCUCUUCGGUCGAGUCCUGGC	32	30	1568	8	19	30	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4023907-4024322	Cluster_1860	Pocillopora_meandrina_HIv1___Sc0000005	4023907	4024322	416	123	60	0.9105691056910569	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	13	0	112	1	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4024399-4025522	Cluster_1861	Pocillopora_meandrina_HIv1___Sc0000005	4024399	4025522	1124	882	377	0.9297052154195011	+	UGAGGACAGAUCUAAUGUACUGAAAAGCGUU	58	4	833	3	3	10	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4025827-4026433	Cluster_1862	Pocillopora_meandrina_HIv1___Sc0000005	4025827	4026433	607	426	158	0.9436619718309859	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	30	1	412	1	0	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4027822-4028249	Cluster_1863	Pocillopora_meandrina_HIv1___Sc0000005	4027822	4028249	428	137	64	0.021897810218978103	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	27	0	131	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4030391-4030921	Cluster_1864	Pocillopora_meandrina_HIv1___Sc0000005	4030391	4030921	531	605	229	0.019834710743801654	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	34	3	588	4	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4031042-4031472	Cluster_1865	Pocillopora_meandrina_HIv1___Sc0000005	4031042	4031472	431	636	153	0.015723270440251572	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	126	0	630	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4101894-4102310	Cluster_1866	Pocillopora_meandrina_HIv1___Sc0000005	4101894	4102310	417	121	75	0.9917355371900827	+	UGCUCAUAUCUAAUAGAACUACUGCCGUU	12	0	116	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4135453-4136041	Cluster_1867	Pocillopora_meandrina_HIv1___Sc0000005	4135453	4136041	589	943	331	0.6383881230116649	.	UAUUCUCCUUCUCGGUCGACUGAGGUUG	60	26	769	16	25	54	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4273350-4273768	Cluster_1868	Pocillopora_meandrina_HIv1___Sc0000005	4273350	4273768	419	250	171	1.0	+	GUAUAAAGGAGAGGAUAAGACU	14	53	85	16	42	28	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4315139-4315565	Cluster_1869	Pocillopora_meandrina_HIv1___Sc0000005	4315139	4315565	427	197	65	0.38071065989847713	.	UUGGAACGUGUUGCUGAACGCUUGUUGC	39	4	177	1	3	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4318507-4319208	Cluster_1870	Pocillopora_meandrina_HIv1___Sc0000005	4318507	4319208	702	232	113	0.9137931034482759	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	22	2	214	1	5	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4320438-4320868	Cluster_1871	Pocillopora_meandrina_HIv1___Sc0000005	4320438	4320868	431	250	136	0.852	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	31	1	227	0	0	2	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4377759-4378183	Cluster_1872	Pocillopora_meandrina_HIv1___Sc0000005	4377759	4378183	425	208	68	1.0	+	AUGAUGAGCGAUUUAUCUCUGACAUUU	36	39	114	14	14	5	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4402426-4402843	Cluster_1873	Pocillopora_meandrina_HIv1___Sc0000005	4402426	4402843	418	71	5	1.0	+	UUCCCGGCUGAUGCACCA	51	71	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4473566-4473993	Cluster_1874	Pocillopora_meandrina_HIv1___Sc0000005	4473566	4473993	428	178	72	0.011235955056179775	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	5	166	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4512272-4512700	Cluster_1875	Pocillopora_meandrina_HIv1___Sc0000005	4512272	4512700	429	1312	83	1.0	+	AAUUGUUAAAUGUAACGGGCGUGCUGUU	407	2	1248	1	8	17	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4525551-4525980	Cluster_1876	Pocillopora_meandrina_HIv1___Sc0000005	4525551	4525980	430	298	37	0.0	-	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	136	0	298	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4527009-4527525	Cluster_1877	Pocillopora_meandrina_HIv1___Sc0000005	4527009	4527525	517	3257	352	0.016886705557261284	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGC	602	43	2992	14	34	22	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4539470-4539906	Cluster_1878	Pocillopora_meandrina_HIv1___Sc0000005	4539470	4539906	437	320	86	0.0125	-	UGAAUCUUGACAGUUGGGUUUACUUGUGA	65	4	305	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4734278-4734714	Cluster_1879	Pocillopora_meandrina_HIv1___Sc0000005	4734278	4734714	437	227	131	0.3524229074889868	.	UCCAACAAUUCAAACACUACAACUUUCUGA	13	58	139	22	5	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4903620-4904044	Cluster_1880	Pocillopora_meandrina_HIv1___Sc0000005	4903620	4904044	425	270	15	0.9666666666666667	+	UCGCCAACUUCUAUGAAAUCUGAGU	199	1	252	0	11	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4922758-4923269	Cluster_1881	Pocillopora_meandrina_HIv1___Sc0000005	4922758	4923269	512	2737	227	0.9850200949945196	+	UCUUUCAAAUCUAUUGUGCAGGUCUCGU	656	27	2682	3	0	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4923736-4924309	Cluster_1882	Pocillopora_meandrina_HIv1___Sc0000005	4923736	4924309	574	1537	370	0.5087833441769681	.	UGCUAUUCAUGAAACCCAUUAGCUUGUCGUG	187	8	1398	7	24	18	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4924389-4925210	Cluster_1883	Pocillopora_meandrina_HIv1___Sc0000005	4924389	4925210	822	10053	1091	0.8346762160549089	+	UUCUCUGCAUUGCUCGAUACCCUAGAUA	1504	121	8524	55	271	605	477	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5081968-5082395	Cluster_1884	Pocillopora_meandrina_HIv1___Sc0000005	5081968	5082395	428	109	14	1.0	+	AUGUAGUGAAACUGAUGGCGGAAUUAAAC	43	4	102	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5338814-5339221	Cluster_1885	Pocillopora_meandrina_HIv1___Sc0000005	5338814	5339221	408	116	91	1.0	+	UAGGACUGAUGUGGCCUUGGCUA	3	26	40	10	12	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5359017-5359444	Cluster_1886	Pocillopora_meandrina_HIv1___Sc0000005	5359017	5359444	428	234	123	0.7606837606837606	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	14	2	217	1	0	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5418990-5419564	Cluster_1887	Pocillopora_meandrina_HIv1___Sc0000005	5418990	5419564	575	917	259	0.14940021810250817	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	137	3	859	4	2	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5419922-5420338	Cluster_1888	Pocillopora_meandrina_HIv1___Sc0000005	5419922	5420338	417	252	135	0.13095238095238096	-	UGAACUUAACGACACCUAGAUCUGCACAAGC	18	5	207	1	11	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5420641-5421617	Cluster_1889	Pocillopora_meandrina_HIv1___Sc0000005	5420641	5421617	977	1245	318	0.163855421686747	-	UAACUCCGAUCCGAUGACCUAGAAAGUC	161	5	1189	6	2	12	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5422011-5422690	Cluster_1890	Pocillopora_meandrina_HIv1___Sc0000005	5422011	5422690	680	290	156	0.07931034482758621	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	23	2	278	2	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5472880-5473521	Cluster_1891	Pocillopora_meandrina_HIv1___Sc0000005	5472880	5473521	642	430	134	0.8837209302325582	+	UACCGUAGAACUUUCCAGAACAUUUCAUUA	73	13	373	4	8	9	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5727557-5728044	Cluster_1892	Pocillopora_meandrina_HIv1___Sc0000005	5727557	5728044	488	426	246	0.3568075117370892	.	UAAUCUCACAAUCUCCGAUGGUACGUCUGG	15	78	271	51	9	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5740802-5741275	Cluster_1893	Pocillopora_meandrina_HIv1___Sc0000005	5740802	5741275	474	972	315	1.0	+	AUGCAUUUGUUGAGUUCAGGU	122	166	414	231	74	44	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5741785-5742213	Cluster_1894	Pocillopora_meandrina_HIv1___Sc0000005	5741785	5742213	429	432	187	1.0	+	GAAUGCUAAAUGAACUGAUGAGACGU	33	39	304	14	16	21	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5810484-5811004	Cluster_1895	Pocillopora_meandrina_HIv1___Sc0000005	5810484	5811004	521	4678	1169	0.004275331338178709	-	GAGAACAAUAGAAUGAGU	136	1459	1860	392	374	278	315	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5811618-5812184	Cluster_1896	Pocillopora_meandrina_HIv1___Sc0000005	5811618	5812184	567	71277	4463	0.9999579106864767	+	CGUUCGCGCUCGUCCCCUU	8350	25348	22320	7560	8933	3833	3283	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5842226-5842649	Cluster_1897	Pocillopora_meandrina_HIv1___Sc0000005	5842226	5842649	424	78	22	0.0	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	45	0	77	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5843650-5844069	Cluster_1898	Pocillopora_meandrina_HIv1___Sc0000005	5843650	5844069	420	237	110	0.9957805907172996	+	AACCUUCAACUUUUAUUUUACAAUUU	21	24	120	17	23	25	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5915220-5916129	Cluster_1899	Pocillopora_meandrina_HIv1___Sc0000005	5915220	5916129	910	8152	1026	1.0	+	GUUGGGAUUCUGCAUGUGCUGAGCUA	2166	761	6057	267	337	334	396	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6246291-6246717	Cluster_1900	Pocillopora_meandrina_HIv1___Sc0000005	6246291	6246717	427	214	135	0.8551401869158879	+	UGAGUCGAGGUUAUUCACAAUACGAGC	23	4	186	1	3	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6246955-6247393	Cluster_1901	Pocillopora_meandrina_HIv1___Sc0000005	6246955	6247393	439	634	173	0.9100946372239748	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	95	2	601	4	2	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6264822-6265222	Cluster_1902	Pocillopora_meandrina_HIv1___Sc0000005	6264822	6265222	401	389	241	0.8431876606683805	+	UCUUUCAGUCACUUAGAAGCCUCCAGG	13	9	322	7	10	21	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6265385-6266062	Cluster_1903	Pocillopora_meandrina_HIv1___Sc0000005	6265385	6266062	678	8218	527	0.9964711608663909	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2213	7	8099	4	42	24	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6355960-6356378	Cluster_1904	Pocillopora_meandrina_HIv1___Sc0000005	6355960	6356378	419	209	31	0.0	-	GUGUGUGUGUCUCUCUGU	87	189	2	17	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6605546-6605973	Cluster_1905	Pocillopora_meandrina_HIv1___Sc0000005	6605546	6605973	428	184	66	0.967391304347826	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	35	1	172	1	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6891562-6891988	Cluster_1906	Pocillopora_meandrina_HIv1___Sc0000005	6891562	6891988	427	185	55	1.0	+	ACAGAUCGGAUCACAGAUCAUGUGAGC	38	32	147	1	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7006922-7007710	Cluster_1907	Pocillopora_meandrina_HIv1___Sc0000005	7006922	7007710	789	652	288	0.9401840490797546	+	UCGAAACCCGUAAUCUAAAGUGAACAUCUU	25	4	620	6	2	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7007995-7008971	Cluster_1908	Pocillopora_meandrina_HIv1___Sc0000005	7007995	7008971	977	1178	262	0.9193548387096774	+	UUAACUCCGAUCCGAUGACCUAGAAAGU	137	6	1135	1	3	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7009057-7009690	Cluster_1909	Pocillopora_meandrina_HIv1___Sc0000005	7009057	7009690	634	891	375	0.7463524130190797	.	UGCUCGAUCUUAAUCUUAUAUUCUCCUU	69	39	731	15	60	10	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7010047-7010622	Cluster_1910	Pocillopora_meandrina_HIv1___Sc0000005	7010047	7010622	576	924	287	0.8333333333333334	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	126	6	867	2	7	15	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7172756-7173691	Cluster_1911	Pocillopora_meandrina_HIv1___Sc0000005	7172756	7173691	936	1381	359	0.0333091962346126	-	UGUUAAGUGCACUCUUCGUCUUGUUGAA	130	6	1355	4	3	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7174561-7174987	Cluster_1912	Pocillopora_meandrina_HIv1___Sc0000005	7174561	7174987	427	173	99	0.12716763005780346	-	UCAGACUAGCAACAUGAUCUUCGGUGA	21	2	155	2	2	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7175000-7175423	Cluster_1913	Pocillopora_meandrina_HIv1___Sc0000005	7175000	7175423	424	217	100	0.027649769585253458	-	UCAAAAGCUGCCGAUAAAUCUAAA	35	0	164	2	2	2	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7179152-7179833	Cluster_1914	Pocillopora_meandrina_HIv1___Sc0000005	7179152	7179833	682	263	127	0.8935361216730038	+	UGACAUGUCGAAACCCGUAAUCUAAAGU	32	0	245	4	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7180225-7181201	Cluster_1915	Pocillopora_meandrina_HIv1___Sc0000005	7180225	7181201	977	1280	324	0.921875	+	UAACUCCGAUCCGAUGACCUAGAAAGUC	153	19	1214	3	6	5	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7181504-7181916	Cluster_1916	Pocillopora_meandrina_HIv1___Sc0000005	7181504	7181916	413	241	142	0.8340248962655602	+	UGACGUAACUUUUCCAAUGAACUUAACGA	16	1	211	1	9	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7182278-7182852	Cluster_1917	Pocillopora_meandrina_HIv1___Sc0000005	7182278	7182852	575	900	302	0.8377777777777777	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	135	6	842	0	2	20	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7308193-7308662	Cluster_1918	Pocillopora_meandrina_HIv1___Sc0000005	7308193	7308662	470	421	136	0.009501187648456057	-	UACAAAGCUCUCACGAAUUCACAAACAGA	58	2	417	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7309081-7310214	Cluster_1919	Pocillopora_meandrina_HIv1___Sc0000005	7309081	7310214	1134	1373	527	0.005098324836125273	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	80	9	1327	5	6	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7310337-7311204	Cluster_1920	Pocillopora_meandrina_HIv1___Sc0000005	7310337	7311204	868	905	383	0.023204419889502764	-	UGCUGAAACGAUUUUGACAGGUUGUCA	64	7	847	6	8	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7311622-7312074	Cluster_1921	Pocillopora_meandrina_HIv1___Sc0000005	7311622	7312074	453	899	280	0.006674082313681869	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	95	2	882	2	2	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7971124-7972081	Cluster_1922	Pocillopora_meandrina_HIv1___Sc0000005	7971124	7972081	958	1232	191	0.1452922077922078	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	396	51	1145	2	4	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8311363-8311780	Cluster_1923	Pocillopora_meandrina_HIv1___Sc0000005	8311363	8311780	418	236	162	1.0	+	CUCUGGAAGUUGAACCGAGCGAUA	9	46	116	14	17	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8311939-8312361	Cluster_1924	Pocillopora_meandrina_HIv1___Sc0000005	8311939	8312361	423	287	212	0.9965156794425087	+	UGAAGUAGAGCCCAGCGACU	7	81	113	20	20	26	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8312572-8312986	Cluster_1925	Pocillopora_meandrina_HIv1___Sc0000005	8312572	8312986	415	254	187	1.0	+	UCUUCAUUUGGUGUUGCGUCUGAGA	7	42	119	19	28	25	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8456348-8456887	Cluster_1926	Pocillopora_meandrina_HIv1___Sc0000005	8456348	8456887	540	2514	374	0.0	-	GGUUAUAGGACAAUGCUACAUUC	765	474	785	64	93	948	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9057453-9058049	Cluster_1927	Pocillopora_meandrina_HIv1___Sc0000005	9057453	9058049	597	5756	492	0.9975677553856845	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	886	18	5692	3	8	9	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9285829-9286338	Cluster_1928	Pocillopora_meandrina_HIv1___Sc0000005	9285829	9286338	510	558	232	0.2867383512544803	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	63	5	514	2	3	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9287286-9288359	Cluster_1929	Pocillopora_meandrina_HIv1___Sc0000005	9287286	9288359	1074	2613	802	0.22770761576731727	.	UUAUUGCCGAACUGAAUGCUGCUC	128	36	2118	13	70	58	318	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9302981-9303404	Cluster_1930	Pocillopora_meandrina_HIv1___Sc0000005	9302981	9303404	424	80	33	0.1	-	UGUGGAUAAUUUAAUAACUGCAGUAGGGA	16	1	75	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9609413-9609842	Cluster_1931	Pocillopora_meandrina_HIv1___Sc0000005	9609413	9609842	430	347	56	1.0	+	UCUUGAAUCACGGUGCUUUUGGAUGUGUC	109	7	336	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10117919-10118346	Cluster_1932	Pocillopora_meandrina_HIv1___Sc0000005	10117919	10118346	428	115	42	1.0	+	UGAGUUGGUAAAAUCUGUUCAGACAUCACA	48	15	89	2	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10301510-10301943	Cluster_1933	Pocillopora_meandrina_HIv1___Sc0000005	10301510	10301943	434	245	73	0.24081632653061225	.	AAGUCAUGAAGGUCAUCGGAAACCCCGA	45	0	245	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10303106-10303644	Cluster_1934	Pocillopora_meandrina_HIv1___Sc0000005	10303106	10303644	539	404	148	0.25742574257425743	.	UGUAACUUUGAGCUUCUUUUUUGCAGGA	113	5	379	0	4	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10337706-10338123	Cluster_1935	Pocillopora_meandrina_HIv1___Sc0000005	10337706	10338123	418	102	7	1.0	+	UCGAACUCGACCCUGUUU	93	101	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10385319-10385743	Cluster_1936	Pocillopora_meandrina_HIv1___Sc0000005	10385319	10385743	425	58201	320	0.9999828181646363	+	UCAGGGAUUGUGGUGAGUUAGUU	21926	10285	127	1423	10176	32234	3956	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10461461-10461961	Cluster_1937	Pocillopora_meandrina_HIv1___Sc0000005	10461461	10461961	501	361	263	0.997229916897507	+	CACUGUGGCAACCAGUGAACGACUGCA	5	73	143	35	27	40	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10543052-10543519	Cluster_1938	Pocillopora_meandrina_HIv1___Sc0000005	10543052	10543519	468	1681	511	0.9970255800118977	+	CUCCUGAUGUGGAACGGCU	219	1022	254	175	102	78	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10602442-10602865	Cluster_1939	Pocillopora_meandrina_HIv1___Sc0000005	10602442	10602865	424	135	32	0.4222222222222222	.	UUAUACCGAAUCUGCCGUUAAGU	31	8	4	1	12	44	66	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10816891-10817313	Cluster_1940	Pocillopora_meandrina_HIv1___Sc0000005	10816891	10817313	423	507	63	0.0	-	UGGCAUAAGGGCAGCCACCCCUU	218	43	4	14	12	398	36	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10822550-10822977	Cluster_1941	Pocillopora_meandrina_HIv1___Sc0000005	10822550	10822977	428	911	91	1.0	+	AAUUUUGGCAUCUGAGAGUC	123	364	368	42	54	53	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10823796-10824278	Cluster_1942	Pocillopora_meandrina_HIv1___Sc0000005	10823796	10824278	483	3837	576	1.0	+	UCUCUGUGAUGAAACAUCU	272	1407	1139	337	319	308	327	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10832517-10832947	Cluster_1943	Pocillopora_meandrina_HIv1___Sc0000005	10832517	10832947	431	1605	293	1.0	+	CAGCUUGGCUGAAGUCUGAUGCACA	232	177	571	132	126	289	310	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10833535-10833970	Cluster_1944	Pocillopora_meandrina_HIv1___Sc0000005	10833535	10833970	436	419	191	1.0	+	GUUGAUCACAAACUCAGCUUGGCU	23	118	133	55	32	28	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10841146-10841565	Cluster_1945	Pocillopora_meandrina_HIv1___Sc0000005	10841146	10841565	420	149	97	0.8187919463087249	+	UAUUGCUGAACAGACGCACG	15	62	34	18	24	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10909091-10909513	Cluster_1946	Pocillopora_meandrina_HIv1___Sc0000005	10909091	10909513	423	452	57	0.9977876106194691	+	UACUGCUAUUCUUCUUCAGGC	107	27	11	143	125	137	9	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11109435-11110606	Cluster_1947	Pocillopora_meandrina_HIv1___Sc0000005	11109435	11110606	1172	1380	574	0.1463768115942029	-	UACAAUAACCUCUGAUUUCACUAAAUG	68	9	1275	5	17	22	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11110702-11111212	Cluster_1948	Pocillopora_meandrina_HIv1___Sc0000005	11110702	11111212	511	831	361	0.2575210589651023	.	UAAGUUCUCGUGGUUCCCUUUCAAGAUG	31	24	693	5	14	45	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11111466-11112721	Cluster_1949	Pocillopora_meandrina_HIv1___Sc0000005	11111466	11112721	1256	1529	668	0.11772400261608895	-	UGAUCAGAUUCGUAACAGGCAAAGCAUA	58	39	1375	7	19	30	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11112920-11115327	Cluster_1950	Pocillopora_meandrina_HIv1___Sc0000005	11112920	11115327	2408	4192	1361	0.07323473282442748	-	UGUACAACCAUCCGAUACUCUUGU	704	32	2923	19	36	67	1115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11115661-11116088	Cluster_1951	Pocillopora_meandrina_HIv1___Sc0000005	11115661	11116088	428	336	197	0.16071428571428573	-	UGAUUCCGCGCUUAUGACUCGUCCCAU	15	2	300	1	2	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11116245-11116697	Cluster_1952	Pocillopora_meandrina_HIv1___Sc0000005	11116245	11116697	453	217	81	0.004608294930875576	-	UGAACACGCGUACUUGUAAUUAUGAAAUG	36	1	210	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11256775-11257436	Cluster_1953	Pocillopora_meandrina_HIv1___Sc0000005	11256775	11257436	662	629	183	0.9491255961844197	+	UUAUAAGGAUCUCAAGGCGAAUAAAGCA	99	39	511	27	13	6	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11260734-11260823	Cluster_1954	Pocillopora_meandrina_HIv1___Sc0000005	11260734	11260823	90	30952	389	1.0	+	UCAGGUUAGGAGCAUGGUAUAGA	11353	11051	138	1178	4468	13443	674	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000005:11261356-11261449	Cluster_1955	Pocillopora_meandrina_HIv1___Sc0000005	11261356	11261449	94	11369	286	1.0	+	UAUGCCAGGUCCUAACUUGAAA	3074	2528	37	1894	4114	2298	498	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000005:11307792-11308261	Cluster_1956	Pocillopora_meandrina_HIv1___Sc0000005	11307792	11308261	470	3860	478	0.002072538860103627	-	GAAGUGUUGAUGUUGGAAUUUAUGAAGGCU	282	232	2352	141	566	436	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11345749-11346169	Cluster_1957	Pocillopora_meandrina_HIv1___Sc0000005	11345749	11346169	421	78	18	0.038461538461538464	-	AACGGUCAAAAAAAAAAAAAAAAA	12	4	35	9	6	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11426379-11426796	Cluster_1958	Pocillopora_meandrina_HIv1___Sc0000005	11426379	11426796	418	69	5	0.0	-	AUUGUUUUUCAUUUGUUGA	55	68	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11485270-11485687	Cluster_1959	Pocillopora_meandrina_HIv1___Sc0000005	11485270	11485687	418	160	124	0.0	-	GAGGAGCGAGACAGAAGACU	6	45	55	18	18	19	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11518650-11519090	Cluster_1960	Pocillopora_meandrina_HIv1___Sc0000005	11518650	11519090	441	278	134	0.0	-	UUUCCGCUUAUUAUCUGAUGAU	18	67	52	40	49	33	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11520400-11520873	Cluster_1961	Pocillopora_meandrina_HIv1___Sc0000005	11520400	11520873	474	238	103	0.0	-	ACCAAGUGAUGAGUUUGAAU	17	107	57	40	18	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11564512-11564936	Cluster_1962	Pocillopora_meandrina_HIv1___Sc0000005	11564512	11564936	425	114	52	1.0	+	UAUUUUUAAUCUCUUGCAUACCCUGUUGG	19	1	112	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11883963-11884509	Cluster_1963	Pocillopora_meandrina_HIv1___Sc0000005	11883963	11884509	547	433	151	1.0	+	UAGCAUUCCAUGUGUACAGUUGACUUUUGAA	51	35	324	14	9	29	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11901631-11902058	Cluster_1964	Pocillopora_meandrina_HIv1___Sc0000005	11901631	11902058	428	94	26	1.0	+	CCAGAGGAAAAGAAACAACAUGCCACAGA	23	1	88	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12166117-12166538	Cluster_1965	Pocillopora_meandrina_HIv1___Sc0000005	12166117	12166538	422	188	139	0.9627659574468085	+	UGAGGUGGGCAAGCGUACUUCG	8	68	49	15	26	20	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12169311-12169764	Cluster_1966	Pocillopora_meandrina_HIv1___Sc0000005	12169311	12169764	454	245	191	1.0	+	GAAAGAGAUUGACGAGGCU	7	54	125	21	15	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12170232-12172359	Cluster_1967	Pocillopora_meandrina_HIv1___Sc0000005	12170232	12172359	2128	3276	2092	0.9993894993894994	+	GCUUGCAGCGUGGAUAAGAGCU	25	957	1105	322	326	294	272	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12416089-12416515	Cluster_1968	Pocillopora_meandrina_HIv1___Sc0000005	12416089	12416515	427	181	68	0.994475138121547	+	UUUGAUUGACGUACGGUAUUUGAGACGC	21	1	173	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12421588-12422017	Cluster_1969	Pocillopora_meandrina_HIv1___Sc0000005	12421588	12422017	430	179	34	0.8994413407821229	+	CAAUGUCUUAGUAGAAAAACGUACACCUGU	62	1	161	4	9	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12614498-12617140	Cluster_1970	Pocillopora_meandrina_HIv1___Sc0000005	12614498	12617140	2643	8979	1851	0.006236774696514088	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1296	23	8801	16	22	24	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12632974-12633473	Cluster_1971	Pocillopora_meandrina_HIv1___Sc0000005	12632974	12633473	500	749	261	1.0	+	GCAGUGUUAGCAAGGUGGGCUGAGGGAA	82	249	305	53	37	38	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12689818-12690306	Cluster_1972	Pocillopora_meandrina_HIv1___Sc0000005	12689818	12690306	489	6434	1224	0.9863226608641592	+	AACUCUGGUUUUCCUUCAACACGCA	236	1321	3378	445	485	408	397	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12718037-12718462	Cluster_1973	Pocillopora_meandrina_HIv1___Sc0000005	12718037	12718462	426	176	53	0.0	-	AUGCAGUCUUACUCUUCUUGUCAACA	62	9	124	10	21	11	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12879314-12879727	Cluster_1974	Pocillopora_meandrina_HIv1___Sc0000005	12879314	12879727	414	122	91	1.0	+	CCAAGCAGAAUUGUCUGGAGAACAGUGAGA	5	9	65	10	12	15	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12880229-12880653	Cluster_1975	Pocillopora_meandrina_HIv1___Sc0000005	12880229	12880653	425	201	112	1.0	+	GUACUGUGUGCUUGGUAGACUGUCC	16	53	78	15	17	22	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12881759-12882203	Cluster_1976	Pocillopora_meandrina_HIv1___Sc0000005	12881759	12882203	445	259	156	0.9961389961389961	+	CUAAUGUGACCAUCUUGAGACA	9	76	78	25	35	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12952939-12953368	Cluster_1977	Pocillopora_meandrina_HIv1___Sc0000005	12952939	12953368	430	100	26	0.01	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUG	25	0	99	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12980349-12980834	Cluster_1978	Pocillopora_meandrina_HIv1___Sc0000005	12980349	12980834	486	1963	228	1.0	+	ACUUGAUGGUGAAAGUCUCUUUUUCUGAUU	659	81	1716	14	26	42	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13075365-13076127	Cluster_1979	Pocillopora_meandrina_HIv1___Sc0000005	13075365	13076127	763	226	84	0.6371681415929203	.	UCAAAUCGCUCUCGACCGUACACUUU	21	10	199	3	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13249316-13249743	Cluster_1980	Pocillopora_meandrina_HIv1___Sc0000005	13249316	13249743	428	134	33	0.0	-	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	25	1	132	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13301595-13302016	Cluster_1981	Pocillopora_meandrina_HIv1___Sc0000005	13301595	13302016	422	224	17	0.0	-	UGAAGAUCUUUGCUCUGAAGU	111	28	0	115	54	26	1	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13318059-13318545	Cluster_1982	Pocillopora_meandrina_HIv1___Sc0000005	13318059	13318545	487	6060	625	0.0	-	UGAUGUUGAUUGUCUCUUUCUGAUUCCA	959	382	3517	522	255	317	1067	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13760603-13761092	Cluster_1983	Pocillopora_meandrina_HIv1___Sc0000005	13760603	13761092	490	1842	435	1.0	+	UGGAAUGAUGGAUUCAUACUGAUAUUAUUG	82	262	1000	84	125	159	212	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13781493-13781939	Cluster_1984	Pocillopora_meandrina_HIv1___Sc0000005	13781493	13781939	447	692	87	0.3222543352601156	.	UCGUUUAGAUCAGAGAUCACCUCAACU	247	1	668	2	3	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13806355-13806772	Cluster_1985	Pocillopora_meandrina_HIv1___Sc0000005	13806355	13806772	418	214	21	0.004672897196261682	-	AUCCCACUUCUGACACCA	160	213	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13832594-13833012	Cluster_1986	Pocillopora_meandrina_HIv1___Sc0000005	13832594	13833012	419	7300	35	0.9993150684931507	+	AACUUUUGACGGUGGAUCA	7147	7293	6	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:109762-110637	Cluster_1987	Pocillopora_meandrina_HIv1___Sc0000006	109762	110637	876	499	291	0.17635270541082165	-	UGAACGACAAGUUAAACAGUAGAACCA	25	11	426	7	13	7	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:110769-111625	Cluster_1988	Pocillopora_meandrina_HIv1___Sc0000006	110769	111625	857	3188	608	0.12766624843161856	-	UCCUUUCCAAUCUGUUAAUGUUUCUAGC	923	49	2942	15	12	28	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:119717-120119	Cluster_1989	Pocillopora_meandrina_HIv1___Sc0000006	119717	120119	403	197	85	0.3604060913705584	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	26	0	186	0	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:142987-143391	Cluster_1990	Pocillopora_meandrina_HIv1___Sc0000006	142987	143391	405	132	73	0.5151515151515151	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	28	2	117	0	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:149398-149826	Cluster_1991	Pocillopora_meandrina_HIv1___Sc0000006	149398	149826	429	476	73	0.025210084033613446	-	AGGUAUAGGUUACUCAAGAUUAAUUGAU	242	3	469	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:471610-472157	Cluster_1992	Pocillopora_meandrina_HIv1___Sc0000006	471610	472157	548	1169	401	0.4508126603934987	.	AACACUACUACCGUGAGACUGAAG	78	18	890	14	31	68	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:475227-475648	Cluster_1993	Pocillopora_meandrina_HIv1___Sc0000006	475227	475648	422	209	127	0.0430622009569378	-	UGCGUCUUGGUCUUGAUGGUGAGCAUAG	8	12	182	3	5	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:484472-484900	Cluster_1994	Pocillopora_meandrina_HIv1___Sc0000006	484472	484900	429	175	80	0.0	-	UUCUGUAGCAGCCGAUGUCCUGGGAGAUGG	30	0	161	2	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:490458-490892	Cluster_1995	Pocillopora_meandrina_HIv1___Sc0000006	490458	490892	435	179	48	0.0	-	UCAAAGAACUCUUUCGACUGCUCAUGGGC	70	7	169	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:495473-496306	Cluster_1996	Pocillopora_meandrina_HIv1___Sc0000006	495473	496306	834	572	231	0.9405594405594405	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	61	4	556	1	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:497239-497707	Cluster_1997	Pocillopora_meandrina_HIv1___Sc0000006	497239	497707	469	720	257	0.10138888888888889	-	UGUAUACCAAAUGAUGACUCAAGUCGACGU	103	9	660	2	4	9	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:497822-498251	Cluster_1998	Pocillopora_meandrina_HIv1___Sc0000006	497822	498251	430	226	120	0.252212389380531	.	UCCGACGAAUAUUAUAAAUGUAGUAAA	11	1	210	0	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:499995-500445	Cluster_1999	Pocillopora_meandrina_HIv1___Sc0000006	499995	500445	451	444	95	0.02027027027027027	-	UCUAGAUGGAUAUACUCGGAUAACUUACU	113	4	426	3	0	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:503729-504277	Cluster_2000	Pocillopora_meandrina_HIv1___Sc0000006	503729	504277	549	1195	186	0.0008368200836820083	-	UGAUUGAGUCAAAGACAAUGUGGGAGUUA	223	4	1151	7	7	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:506791-507631	Cluster_2001	Pocillopora_meandrina_HIv1___Sc0000006	506791	507631	841	998	339	0.04909819639278557	-	UAAUGACUUCAGAGUAGACAGAGACGGU	78	9	961	11	1	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:507698-508124	Cluster_2002	Pocillopora_meandrina_HIv1___Sc0000006	507698	508124	427	347	86	0.06051873198847262	-	UGUACAAGGUCGAAAGAAUCCAGGAUA	187	1	328	2	0	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:508498-508924	Cluster_2003	Pocillopora_meandrina_HIv1___Sc0000006	508498	508924	427	170	87	0.12352941176470589	-	UCAGACUAGCAACAUGAUCUUCGGUGA	21	3	156	2	0	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:508937-509360	Cluster_2004	Pocillopora_meandrina_HIv1___Sc0000006	508937	509360	424	182	86	0.027472527472527472	-	UCAAAAGCUGCCGAUAAAUCUAAA	31	3	135	0	1	3	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:513018-513961	Cluster_2005	Pocillopora_meandrina_HIv1___Sc0000006	513018	513961	944	43959	646	2.274847016538138e-05	-	UUCAAUGUGAAAAGUCUACUUAGGAUGAGU	27579	12	43896	4	9	15	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:517129-517558	Cluster_2006	Pocillopora_meandrina_HIv1___Sc0000006	517129	517558	430	475	102	0.0	-	UUGAACGUCACUGUCUAUAAGCAAUGCAA	43	0	444	2	9	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:520035-520520	Cluster_2007	Pocillopora_meandrina_HIv1___Sc0000006	520035	520520	486	304	127	0.006578947368421052	-	UGGAAACUAUCGUAUGAAAAGAAAUCAAAGU	47	2	291	4	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:521145-521554	Cluster_2008	Pocillopora_meandrina_HIv1___Sc0000006	521145	521554	410	117	48	0.0	-	UGAUCGACUGUAUGAAAGCUUUAAGAUGGU	34	6	99	2	1	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:523336-524100	Cluster_2009	Pocillopora_meandrina_HIv1___Sc0000006	523336	524100	765	372	193	0.0	-	UGAGAAGAUCUUUUAUUCGUCGCGGCCAUU	69	2	352	2	7	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:524294-525055	Cluster_2010	Pocillopora_meandrina_HIv1___Sc0000006	524294	525055	762	403	188	0.0	-	UGGGUGUAGUGCUGAAUACUGCAGCAUU	78	9	386	0	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:525192-525606	Cluster_2011	Pocillopora_meandrina_HIv1___Sc0000006	525192	525606	415	200	112	0.0	-	UGAGCUUUCCAACUGAUAAGUUACACUGAUU	12	3	195	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:525831-526840	Cluster_2012	Pocillopora_meandrina_HIv1___Sc0000006	525831	526840	1010	612	289	0.0	-	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	39	4	585	5	4	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:526964-528351	Cluster_2013	Pocillopora_meandrina_HIv1___Sc0000006	526964	528351	1388	5512	991	0.005805515239477504	-	UUGUAACUGCGAUCGUUCUUUGGAGC	304	17	5146	20	113	130	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:528645-530055	Cluster_2014	Pocillopora_meandrina_HIv1___Sc0000006	528645	530055	1411	2043	720	0.00881057268722467	-	UAAGACAAGUACUUCAAACACUCUCUAGUAG	201	9	1968	7	9	15	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:531712-532132	Cluster_2015	Pocillopora_meandrina_HIv1___Sc0000006	531712	532132	421	94	42	0.0	-	UUUUUAAAAUAAGACUCUCGGAAAUGCGUU	17	0	92	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:537435-537912	Cluster_2016	Pocillopora_meandrina_HIv1___Sc0000006	537435	537912	478	3153	297	0.009197589597209007	-	UGAUUGAGUCAAAGACAAUGUGGGAGUU	1187	4	3042	3	8	11	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:540448-540877	Cluster_2017	Pocillopora_meandrina_HIv1___Sc0000006	540448	540877	430	212	86	0.0	-	UGGUGUCGCUGUAGCAUUAUACAUGUUUAC	52	5	205	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:542720-543123	Cluster_2018	Pocillopora_meandrina_HIv1___Sc0000006	542720	543123	404	156	73	0.0	-	UACUAGUCUGUGACCUUAUUUGAAUUUGUA	23	4	150	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:543292-543722	Cluster_2019	Pocillopora_meandrina_HIv1___Sc0000006	543292	543722	431	251	86	0.0	-	UUUACAGGGAUUUGGAAACAAAAAUUACAUC	96	12	234	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:544208-544637	Cluster_2020	Pocillopora_meandrina_HIv1___Sc0000006	544208	544637	430	102	33	0.0	-	UUUGACCAAUGCUAGAAGUAAAUAACCGCU	34	0	100	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:547215-547644	Cluster_2021	Pocillopora_meandrina_HIv1___Sc0000006	547215	547644	430	490	129	0.0	-	UUGAACGUCACUGUCUAUAAGCAAUGC	38	4	462	0	5	13	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:552241-552653	Cluster_2022	Pocillopora_meandrina_HIv1___Sc0000006	552241	552653	413	128	51	0.0	-	UGUUUAUCCCAACUGUAAUAACGCAAGUAAC	29	4	120	0	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:553903-554404	Cluster_2023	Pocillopora_meandrina_HIv1___Sc0000006	553903	554404	502	572	111	0.0	-	UUUUCCAGAAAGACCAUUAACACUUAGAUU	187	0	569	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:554894-555325	Cluster_2024	Pocillopora_meandrina_HIv1___Sc0000006	554894	555325	432	752	157	0.0	-	UUUGAAACCCCGAUUCAGUUGGACAAAACU	295	21	721	0	1	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:560719-561285	Cluster_2025	Pocillopora_meandrina_HIv1___Sc0000006	560719	561285	567	605	176	0.01652892561983471	-	UAAGAACUAACUGGUGUGAGGUGCUAUU	188	8	583	1	4	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:561704-562132	Cluster_2026	Pocillopora_meandrina_HIv1___Sc0000006	561704	562132	429	206	121	0.019417475728155338	-	UCAUUUCUUGGACUACCGACUGGACCAUG	8	1	202	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:566406-566836	Cluster_2027	Pocillopora_meandrina_HIv1___Sc0000006	566406	566836	431	476	69	0.0021008403361344537	-	UUUCUGCACUUAUUGGCAAUCUUUUGCUGGA	82	3	466	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:567086-567762	Cluster_2028	Pocillopora_meandrina_HIv1___Sc0000006	567086	567762	677	385	130	0.0025974025974025974	-	UGACAUGCAGGUAUACAAUGAAAGCAAGA	41	5	372	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:567799-568217	Cluster_2029	Pocillopora_meandrina_HIv1___Sc0000006	567799	568217	419	243	85	0.0	-	UGAGAUGCUUGGUAAUUAUAGGUUCGG	42	11	219	3	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:568764-569364	Cluster_2030	Pocillopora_meandrina_HIv1___Sc0000006	568764	569364	601	386	142	0.0051813471502590676	-	UGAGAAUUCACAGCUCUGAUAUAGAAGAUA	35	12	367	2	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:664078-664505	Cluster_2031	Pocillopora_meandrina_HIv1___Sc0000006	664078	664505	428	199	96	0.9296482412060302	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	24	0	191	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:743223-743711	Cluster_2032	Pocillopora_meandrina_HIv1___Sc0000006	743223	743711	489	1077	246	0.8690807799442897	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	139	7	951	4	10	70	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:790840-791737	Cluster_2033	Pocillopora_meandrina_HIv1___Sc0000006	790840	791737	898	573	242	0.5113438045375218	.	UAUUCUUAUCAUCUGCGUUUGGUCUACUGC	40	6	517	3	2	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:958695-959122	Cluster_2034	Pocillopora_meandrina_HIv1___Sc0000006	958695	959122	428	420	141	0.15476190476190477	-	UUGGAACGUGUUGCUGAACGCUUGCU	43	21	354	6	17	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1012623-1013052	Cluster_2035	Pocillopora_meandrina_HIv1___Sc0000006	1012623	1013052	430	311	67	0.00964630225080386	-	AGUUGACAUAUUGACUGGUACGAACAAGGG	47	5	297	0	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1058984-1059413	Cluster_2036	Pocillopora_meandrina_HIv1___Sc0000006	1058984	1059413	430	382	69	0.8952879581151832	+	UCAUUUCUUCUACAGACACUGGAUACCAGA	104	7	317	6	2	17	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1068383-1068820	Cluster_2037	Pocillopora_meandrina_HIv1___Sc0000006	1068383	1068820	438	231	133	0.6363636363636364	.	UCAUACGGCUUCUUGAAUUUAUCCAGU	17	7	200	4	3	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1070154-1070581	Cluster_2038	Pocillopora_meandrina_HIv1___Sc0000006	1070154	1070581	428	114	12	0.9824561403508771	+	UACCAAGGUCUUGUAGUCUAGUACAACU	73	0	113	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1102308-1102884	Cluster_2039	Pocillopora_meandrina_HIv1___Sc0000006	1102308	1102884	577	540	230	0.2574074074074074	.	UAUGACAGUUUUUCCGACAUCGAAUUUAGC	37	4	514	3	5	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1107123-1107548	Cluster_2040	Pocillopora_meandrina_HIv1___Sc0000006	1107123	1107548	426	132	75	0.26515151515151514	.	UAAGAGAUCAACUGUCAACGGACGGCU	8	0	129	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1117899-1118499	Cluster_2041	Pocillopora_meandrina_HIv1___Sc0000006	1117899	1118499	601	3102	424	0.09252095422308189	-	UAUCAUGGUCUAAAAUUGGUGCUUCAGUU	610	8	2982	11	13	42	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1119518-1119944	Cluster_2042	Pocillopora_meandrina_HIv1___Sc0000006	1119518	1119944	427	192	74	0.3333333333333333	.	UUAAAACGUGUUGCUGAACGCUUGCUAC	34	12	168	4	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1184890-1185316	Cluster_2043	Pocillopora_meandrina_HIv1___Sc0000006	1184890	1185316	427	83	31	0.03614457831325301	-	AAUGGGAAAACGAGAACAGCGUGAGUGA	37	2	78	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1283609-1284026	Cluster_2044	Pocillopora_meandrina_HIv1___Sc0000006	1283609	1284026	418	146	49	0.9315068493150684	+	UAAAUCUGGAGACUGGGC	52	107	21	8	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1704195-1704625	Cluster_2045	Pocillopora_meandrina_HIv1___Sc0000006	1704195	1704625	431	264	101	0.8409090909090909	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	44	6	229	3	4	15	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1760581-1761007	Cluster_2046	Pocillopora_meandrina_HIv1___Sc0000006	1760581	1761007	427	233	97	0.8197424892703863	+	UCGAGAGAUUUAUCCUAGAAAGGCGAGC	21	5	189	2	2	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1764725-1765156	Cluster_2047	Pocillopora_meandrina_HIv1___Sc0000006	1764725	1765156	432	298	90	0.9362416107382551	+	UCAUAACUAGUGUCCAGAUCUCUCAUC	53	2	290	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1770604-1771023	Cluster_2048	Pocillopora_meandrina_HIv1___Sc0000006	1770604	1771023	420	149	84	0.9932885906040269	+	UGAGUAUUUUUCUAGUUCUGGGACUGCC	10	1	133	1	4	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1785098-1785525	Cluster_2049	Pocillopora_meandrina_HIv1___Sc0000006	1785098	1785525	428	259	115	0.9961389961389961	+	UUCGUCACCAUCUUCACUUUCCCUCAGUGC	26	1	247	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1794331-1794759	Cluster_2050	Pocillopora_meandrina_HIv1___Sc0000006	1794331	1794759	429	236	62	0.9788135593220338	+	UUACAAUUUCUCUCUUGACCUUUAAUUUC	91	5	205	1	2	5	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1796727-1797520	Cluster_2051	Pocillopora_meandrina_HIv1___Sc0000006	1796727	1797520	794	1246	342	0.9518459069020867	+	UUGGGAUUGUGACUGGUUUAAAGGUGAGU	108	7	1177	17	16	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1800817-1801246	Cluster_2052	Pocillopora_meandrina_HIv1___Sc0000006	1800817	1801246	430	455	116	0.9934065934065934	+	UGAACUGCAAGAAACUGCUCGUGGAUCUGC	173	6	435	0	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1801823-1802256	Cluster_2053	Pocillopora_meandrina_HIv1___Sc0000006	1801823	1802256	434	409	112	0.9975550122249389	+	UUCACCAGGAACGAUCUCAGGUACUUUG	76	2	394	1	2	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1802435-1802851	Cluster_2054	Pocillopora_meandrina_HIv1___Sc0000006	1802435	1802851	417	214	108	1.0	+	UGUCUGACAGUUGUCGUUCUGUACCGUC	11	2	211	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1810844-1811273	Cluster_2055	Pocillopora_meandrina_HIv1___Sc0000006	1810844	1811273	430	121	27	0.9917355371900827	+	UGCCUUAAGACCAGAUUGUUUACAGUGAGA	66	1	118	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1814556-1815681	Cluster_2056	Pocillopora_meandrina_HIv1___Sc0000006	1814556	1815681	1126	885	305	0.9977401129943503	+	UCCAUUUCCAUACUUGAGCUUGAGCCACC	81	2	857	2	7	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1839225-1839665	Cluster_2057	Pocillopora_meandrina_HIv1___Sc0000006	1839225	1839665	441	313	166	1.0	+	UCAGAUUUGUGCUUGAUGGUCUGUGUGC	13	3	305	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1841407-1841835	Cluster_2058	Pocillopora_meandrina_HIv1___Sc0000006	1841407	1841835	429	275	107	0.9927272727272727	+	UGAAAGAUAUUGUGGUGCGACGCCGUAGA	35	1	271	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1846848-1847277	Cluster_2059	Pocillopora_meandrina_HIv1___Sc0000006	1846848	1847277	430	197	73	0.9949238578680203	+	UUUAUAUCUGUGUAUUUCAACUUUGGCGUU	53	0	196	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1850115-1853109	Cluster_2060	Pocillopora_meandrina_HIv1___Sc0000006	1850115	1853109	2995	9900	1702	0.9872727272727273	+	UGAAUACUUAAGGGUCGGUCAGGCUGAUA	1279	48	9636	27	34	69	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1861618-1862023	Cluster_2061	Pocillopora_meandrina_HIv1___Sc0000006	1861618	1862023	406	165	81	0.18787878787878787	-	UAAGCAAUGUCGGUUUCCAAAAUAAACUGG	15	1	152	2	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1864157-1864869	Cluster_2062	Pocillopora_meandrina_HIv1___Sc0000006	1864157	1864869	713	389	207	0.506426735218509	.	UAAGGUUUCCAAUUGCCUCCGUUGGGCA	15	14	309	18	7	19	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1881939-1882475	Cluster_2063	Pocillopora_meandrina_HIv1___Sc0000006	1881939	1882475	537	748	279	0.8997326203208557	+	UUAUCCUUUAGUUUUGAGUCUGGCAAUU	65	9	691	5	7	7	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1895830-1897291	Cluster_2064	Pocillopora_meandrina_HIv1___Sc0000006	1895830	1897291	1462	4087	1147	0.5935894298996819	.	UUAAAUCACAUUUACGCUGCAAUCUGGA	110	73	3491	71	104	149	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1897414-1898305	Cluster_2065	Pocillopora_meandrina_HIv1___Sc0000006	1897414	1898305	892	4917	701	0.8444173276388042	+	UACGCGAGGAAGUCUUUACCCAUGAAUG	1155	47	4582	12	58	107	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1898536-1898963	Cluster_2066	Pocillopora_meandrina_HIv1___Sc0000006	1898536	1898963	428	415	69	0.963855421686747	+	UGAGUUAAUAUCUGGUCCACUGAAGAA	130	3	377	1	1	32	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1899014-1899789	Cluster_2067	Pocillopora_meandrina_HIv1___Sc0000006	1899014	1899789	776	10183	914	0.2563095355003437	.	GAACUUCAGAUCUUUACGUGACUACAGCA	1605	132	9516	22	30	75	408	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1900971-1902395	Cluster_2068	Pocillopora_meandrina_HIv1___Sc0000006	1900971	1902395	1425	10590	1998	0.4141643059490085	.	ACACAGUGCAACUCUCGAAUCUUAAAAAU	815	182	9263	117	128	336	564	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1902953-1903579	Cluster_2069	Pocillopora_meandrina_HIv1___Sc0000006	1902953	1903579	627	704	167	0.9886363636363636	+	UACGGUGUUCCAUGCCUCUGUAUGAAG	94	1	672	6	4	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1921978-1922402	Cluster_2070	Pocillopora_meandrina_HIv1___Sc0000006	1921978	1922402	425	137	68	0.8467153284671532	+	UAUGAAUGCUCUCGUUGUUGACUGAAG	12	0	126	1	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1930255-1930840	Cluster_2071	Pocillopora_meandrina_HIv1___Sc0000006	1930255	1930840	586	716	203	0.5041899441340782	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	203	8	619	6	3	29	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1946306-1946734	Cluster_2072	Pocillopora_meandrina_HIv1___Sc0000006	1946306	1946734	429	445	124	0.9662921348314607	+	UGUAGAAUCAAUCUGUUACUAAGACACC	115	1	428	4	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1947516-1947926	Cluster_2073	Pocillopora_meandrina_HIv1___Sc0000006	1947516	1947926	411	171	118	0.8304093567251462	+	UGAUUUCGGUAUUGAUCCAGGGAAGUG	7	0	158	0	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1948502-1949040	Cluster_2074	Pocillopora_meandrina_HIv1___Sc0000006	1948502	1949040	539	524	182	0.8034351145038168	+	UGUAUUCACUUGGGUUAACUCUUCCACA	108	0	507	0	1	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1967024-1967498	Cluster_2075	Pocillopora_meandrina_HIv1___Sc0000006	1967024	1967498	475	5951	158	0.018820366324987396	-	CAUUCUGCUUACACGGUUUGAGGACUUGUA	2504	4	5922	0	4	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1972166-1972656	Cluster_2076	Pocillopora_meandrina_HIv1___Sc0000006	1972166	1972656	491	1029	169	0.11467444120505345	-	UGAGAUUGGCUGGGAUUUUGGUGAGUG	116	12	963	6	8	24	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1978683-1979218	Cluster_2077	Pocillopora_meandrina_HIv1___Sc0000006	1978683	1979218	536	537	207	0.19553072625698323	-	UGUAUUCACUUGGGUUAACUCUUCCACA	107	2	516	2	8	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1979794-1980207	Cluster_2078	Pocillopora_meandrina_HIv1___Sc0000006	1979794	1980207	414	199	132	0.20100502512562815	.	UGAUUUCGGUAUUGAUCCAGGGAAGUG	6	5	171	2	2	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1980989-1981417	Cluster_2079	Pocillopora_meandrina_HIv1___Sc0000006	1980989	1981417	429	460	113	0.021739130434782608	-	UGUAGAAUCAAUCUGUUACUAAGACACC	117	0	446	7	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2002624-2003033	Cluster_2080	Pocillopora_meandrina_HIv1___Sc0000006	2002624	2003033	410	138	56	0.0	-	UGUGGACGUGUGUGUUUCUUUCGUGCGUA	16	0	135	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2004193-2005361	Cluster_2081	Pocillopora_meandrina_HIv1___Sc0000006	2004193	2005361	1169	2899	870	0.0434632631942049	-	UAAUUUCUUUCAGUUGUUGGCUUGAGG	311	23	2631	16	17	43	169	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2007314-2007983	Cluster_2082	Pocillopora_meandrina_HIv1___Sc0000006	2007314	2007983	670	2123	253	0.006123410268487989	-	UGUCAAAUUCAGGUUGUGUCAGGAGUCUGC	363	13	2059	3	1	33	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2010508-2010936	Cluster_2083	Pocillopora_meandrina_HIv1___Sc0000006	2010508	2010936	429	521	71	0.9577735124760077	+	UUGAGUCUUUCUUUAGUAAUAUGCAGUG	84	0	510	2	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2012351-2012779	Cluster_2084	Pocillopora_meandrina_HIv1___Sc0000006	2012351	2012779	429	218	88	0.027522935779816515	-	UAUGAUUGAAUUGACUCGUGGUAGCUAUU	22	1	205	1	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2027219-2027971	Cluster_2085	Pocillopora_meandrina_HIv1___Sc0000006	2027219	2027971	753	619	261	0.029079159935379646	-	UGUUCCAAUCUUUUGCAUUCUUGUAUC	49	8	565	9	5	8	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2029209-2029637	Cluster_2086	Pocillopora_meandrina_HIv1___Sc0000006	2029209	2029637	429	177	91	0.0	-	UGAUUUGUUGCUCAACGUAAUUCGUAACCGA	15	4	172	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2032671-2033100	Cluster_2087	Pocillopora_meandrina_HIv1___Sc0000006	2032671	2033100	430	903	120	0.004429678848283499	-	UGUUAUCACGUCUGUACUCUUCAAUCGAC	480	2	895	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2042803-2043817	Cluster_2088	Pocillopora_meandrina_HIv1___Sc0000006	2042803	2043817	1015	1064	332	0.18703007518796994	-	UAAGAUCUCUUCGGUCAGAUCGUCACGG	137	3	1034	4	2	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2044081-2044510	Cluster_2089	Pocillopora_meandrina_HIv1___Sc0000006	2044081	2044510	430	664	100	0.9066265060240963	+	UGUAUCUGCAGCUCUUGUUAAUUUGUGC	121	2	658	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2058209-2058968	Cluster_2090	Pocillopora_meandrina_HIv1___Sc0000006	2058209	2058968	760	1631	342	0.9466584917228694	+	UGCAAUUUGAAAUCCUUUGUCGGCCAUA	133	16	1396	10	4	166	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2059557-2059984	Cluster_2091	Pocillopora_meandrina_HIv1___Sc0000006	2059557	2059984	428	144	61	0.09027777777777778	-	UCCAACGGCGAGAACGUAGACAUUUAUUUA	32	7	130	3	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2062003-2063017	Cluster_2092	Pocillopora_meandrina_HIv1___Sc0000006	2062003	2063017	1015	1388	611	0.6635446685878963	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	61	26	1227	5	21	33	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2064224-2064648	Cluster_2093	Pocillopora_meandrina_HIv1___Sc0000006	2064224	2064648	425	254	147	0.11811023622047244	-	UGGAACUCUUUGGAUUGUUGGAAACUGAC	16	1	228	2	2	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2065278-2065703	Cluster_2094	Pocillopora_meandrina_HIv1___Sc0000006	2065278	2065703	426	165	69	0.01818181818181818	-	UUAUCAGGAUCUCAAGGCGAAUAAAGCAAG	19	7	156	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2067012-2067673	Cluster_2095	Pocillopora_meandrina_HIv1___Sc0000006	2067012	2067673	662	661	272	0.007564296520423601	-	UGCAUCUGAAUAGGUAUUUCAAACAUUCUC	17	7	599	5	3	17	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2070860-2071363	Cluster_2096	Pocillopora_meandrina_HIv1___Sc0000006	2070860	2071363	504	3720	364	0.5970430107526882	.	UACGAUCUUACACUUGGAAAUAAUAAAAUG	815	10	3596	6	15	54	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2071608-2072035	Cluster_2097	Pocillopora_meandrina_HIv1___Sc0000006	2071608	2072035	428	149	45	0.020134228187919462	-	UCAGAAUUGGUGGGCUCAGUGGACGGCC	35	1	143	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2074248-2075236	Cluster_2098	Pocillopora_meandrina_HIv1___Sc0000006	2074248	2075236	989	1484	449	0.01954177897574124	-	UGAACGGAACUGUUGUUGUGGAUGACAUC	141	26	1375	17	23	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2075446-2076023	Cluster_2099	Pocillopora_meandrina_HIv1___Sc0000006	2075446	2076023	578	399	160	0.010025062656641603	-	UCCAUAGUCAUCUGUGAUAUCUUCAGAGA	41	7	368	2	2	1	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2077278-2077698	Cluster_2100	Pocillopora_meandrina_HIv1___Sc0000006	2077278	2077698	421	190	99	0.0	-	UGAAUCGCUGUAGGUUUGGCCUGUGAAG	21	5	183	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2081084-2081505	Cluster_2101	Pocillopora_meandrina_HIv1___Sc0000006	2081084	2081505	422	89	30	0.0	-	UUCUUUACAAACGUGCUACAAGUAACCAUGC	28	0	88	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2082366-2082803	Cluster_2102	Pocillopora_meandrina_HIv1___Sc0000006	2082366	2082803	438	1484	241	0.0006738544474393531	-	UGUGAAUUCCUUCUCAAAAAGAGCCUUG	236	0	1437	3	4	3	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2083932-2084804	Cluster_2103	Pocillopora_meandrina_HIv1___Sc0000006	2083932	2084804	873	1388	357	0.008645533141210375	-	UGUUUCGCUCUUCAGUAAAAUCCCAGUUGA	116	12	1298	5	1	8	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2085227-2085655	Cluster_2104	Pocillopora_meandrina_HIv1___Sc0000006	2085227	2085655	429	176	51	0.0	-	UCCUGCCUCCUCUGUACGAUAUUGCUGUG	59	1	173	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2086586-2087013	Cluster_2105	Pocillopora_meandrina_HIv1___Sc0000006	2086586	2087013	428	206	102	0.0	-	UGAUCUUACUUGUUUCAACUCUGAGUCAGA	29	3	191	2	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2088855-2089286	Cluster_2106	Pocillopora_meandrina_HIv1___Sc0000006	2088855	2089286	432	167	61	0.0	-	UUAUACGUGAAAAAUCUGUUCCGCUCUAUGU	20	2	163	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2089530-2090266	Cluster_2107	Pocillopora_meandrina_HIv1___Sc0000006	2089530	2090266	737	368	172	0.0	-	UAAAUGUCGUGAGGUUGCUGUUUGAGCAUA	19	3	354	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2093361-2094326	Cluster_2108	Pocillopora_meandrina_HIv1___Sc0000006	2093361	2094326	966	8790	663	0.01080773606370876	-	UGAUUUGUUGCUGCCCUCUUGCUGC	2631	60	8409	16	66	109	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2094699-2095260	Cluster_2109	Pocillopora_meandrina_HIv1___Sc0000006	2094699	2095260	562	1042	327	0.04702495201535509	-	UGGUUUGUUGAGGCAUUUGUCUAAUGGC	107	12	1002	10	4	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2097314-2097714	Cluster_2110	Pocillopora_meandrina_HIv1___Sc0000006	2097314	2097714	401	130	79	0.0	-	UUUAUGGAAUCCAUGGUCUGUCCACUGAC	7	6	119	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2097956-2098522	Cluster_2111	Pocillopora_meandrina_HIv1___Sc0000006	2097956	2098522	567	477	197	0.010482180293501049	-	UGCGAUUUAACUGGAUACUGGGUGUGGUU	50	11	447	0	4	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2098992-2099500	Cluster_2112	Pocillopora_meandrina_HIv1___Sc0000006	2098992	2099500	509	478	199	0.0020920502092050207	-	UAGGUUCUUUAAGGGAAUAUUCAAAACGUG	48	5	460	1	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2100159-2100582	Cluster_2113	Pocillopora_meandrina_HIv1___Sc0000006	2100159	2100582	424	282	131	0.01773049645390071	-	UGAUUACUUGCUGGCCUUCCUCUGAAGU	22	1	248	0	0	3	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2100770-2101564	Cluster_2114	Pocillopora_meandrina_HIv1___Sc0000006	2100770	2101564	795	537	275	0.020484171322160148	-	UGGGUGUGGAUUUCCUUAGCUGAUAAAUA	48	15	501	7	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2103424-2103853	Cluster_2115	Pocillopora_meandrina_HIv1___Sc0000006	2103424	2103853	430	163	67	0.0	-	UUCGAACACUUUGUCUCUUACCACCAGAGC	53	1	158	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2105131-2105704	Cluster_2116	Pocillopora_meandrina_HIv1___Sc0000006	2105131	2105704	574	569	248	0.0	-	UUCCUGCACAGCUCACAUUUAAAACUGUC	84	10	549	2	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2106041-2107040	Cluster_2117	Pocillopora_meandrina_HIv1___Sc0000006	2106041	2107040	1000	3024	487	0.07804232804232804	-	UGCACUUCAUUUUCUGGGAUUUCAUUGUUC	1056	49	2714	21	14	201	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2107146-2108374	Cluster_2118	Pocillopora_meandrina_HIv1___Sc0000006	2107146	2108374	1229	9641	1193	0.00020744736023234104	-	UUGGUGUGAUUGUCAUGUCUGGGAAUUUU	870	106	9242	41	117	62	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2108910-2109311	Cluster_2119	Pocillopora_meandrina_HIv1___Sc0000006	2108910	2109311	402	97	33	0.0	-	UGUGAAAAUUCUCUGCGCCAAUUAGUUGAGC	27	0	93	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2109466-2109887	Cluster_2120	Pocillopora_meandrina_HIv1___Sc0000006	2109466	2109887	422	107	49	0.0	-	UGCUUUAUCAAGACUAACUAUUAUAUCUGA	15	3	93	2	5	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2110009-2110473	Cluster_2121	Pocillopora_meandrina_HIv1___Sc0000006	2110009	2110473	465	1870	163	0.0	-	UACAGCUCUUCAAUUUCUGCAUUUCCAGA	673	2	1860	4	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2222589-2223007	Cluster_2122	Pocillopora_meandrina_HIv1___Sc0000006	2222589	2223007	419	105	5	0.0	-	GAAGUUCUGGUUUAAAAAA	70	104	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2361256-2361678	Cluster_2123	Pocillopora_meandrina_HIv1___Sc0000006	2361256	2361678	423	194	78	0.28865979381443296	.	UGGUAUUUUGAUUUUCUGAUAGACAAGA	46	13	164	10	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2367614-2368043	Cluster_2124	Pocillopora_meandrina_HIv1___Sc0000006	2367614	2368043	430	145	51	0.0	-	UCUGCUGUAUAUUCCAAUCUUUGUCAAUGA	22	0	137	0	0	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2381039-2381441	Cluster_2125	Pocillopora_meandrina_HIv1___Sc0000006	2381039	2381441	403	205	103	0.0975609756097561	-	UCAUCUUUGGUACAUUAGUAAUCACACAA	20	1	189	1	2	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2382027-2382706	Cluster_2126	Pocillopora_meandrina_HIv1___Sc0000006	2382027	2382706	680	1297	364	0.2235929067077872	.	UCAGCUCGAUCCAGAUCAUUAGCUAAUGAAU	130	14	1186	3	7	24	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2406541-2407009	Cluster_2127	Pocillopora_meandrina_HIv1___Sc0000006	2406541	2407009	469	1818	181	0.0038503850385038503	-	UGGGGAAGGUCUUCUUGGUCUGGAGAAA	481	12	1670	8	6	37	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2407808-2408403	Cluster_2128	Pocillopora_meandrina_HIv1___Sc0000006	2407808	2408403	596	830	167	0.020481927710843374	-	UUUGAUUUUAAUGGGAUGCUACUGCCCUGUA	190	25	782	2	5	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2409391-2409959	Cluster_2129	Pocillopora_meandrina_HIv1___Sc0000006	2409391	2409959	569	212	87	0.009433962264150943	-	UUGUCUUGUAUACUCCUUGGCUAGCUGU	23	2	203	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2415407-2415972	Cluster_2130	Pocillopora_meandrina_HIv1___Sc0000006	2415407	2415972	566	753	179	0.0013280212483399733	-	UGAAACGAAUAGCUGCUCAACCUGUGGG	68	5	723	0	5	15	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2430788-2432068	Cluster_2131	Pocillopora_meandrina_HIv1___Sc0000006	2430788	2432068	1281	5609	1188	0.9623818862542343	+	UGAUCUGACUGUUUCAUGGCUGAACUGUG	360	24	5469	4	7	37	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2446610-2447281	Cluster_2132	Pocillopora_meandrina_HIv1___Sc0000006	2446610	2447281	672	380	120	0.0868421052631579	-	UGCGAGGAAAAGCUUGUGUAGACGCGGC	50	8	359	3	2	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2448506-2448935	Cluster_2133	Pocillopora_meandrina_HIv1___Sc0000006	2448506	2448935	430	102	20	0.00980392156862745	-	UGCUUGUCCCACUGUACGACCUUAGUCGUC	68	0	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2456274-2456696	Cluster_2134	Pocillopora_meandrina_HIv1___Sc0000006	2456274	2456696	423	109	36	0.0	-	UAGGAUCUUGUAAGAGAAGCUGCGCUUCCA	30	1	106	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2481721-2482147	Cluster_2135	Pocillopora_meandrina_HIv1___Sc0000006	2481721	2482147	427	251	125	0.0	-	UGCUACCCAGUUCUGUGUCUUCAUUGAAUG	17	3	244	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2483223-2483653	Cluster_2136	Pocillopora_meandrina_HIv1___Sc0000006	2483223	2483653	431	231	102	0.06493506493506493	-	UUCUCGCUGAUUGAUCUAAAUAAAGACUUU	22	3	227	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2490004-2491209	Cluster_2137	Pocillopora_meandrina_HIv1___Sc0000006	2490004	2491209	1206	4400	757	0.003181818181818182	-	UACUGUCAGGUUGGUGAAAGUGUAUGAGU	942	58	4117	18	86	27	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2492777-2493187	Cluster_2138	Pocillopora_meandrina_HIv1___Sc0000006	2492777	2493187	411	176	83	0.08522727272727272	-	UGUGUUUCUAUAAGUUCUGUUGCUUUAU	11	1	168	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2493700-2494299	Cluster_2139	Pocillopora_meandrina_HIv1___Sc0000006	2493700	2494299	600	391	182	0.023017902813299233	-	UGAAAUCUGCUGCACAAUAUUGUUUAAGG	24	1	377	2	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2494751-2495463	Cluster_2140	Pocillopora_meandrina_HIv1___Sc0000006	2494751	2495463	713	973	346	0.009249743062692703	-	UGGUUGCUAUACACUCUCUGAGCUUGGU	99	10	932	2	4	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2510446-2510874	Cluster_2141	Pocillopora_meandrina_HIv1___Sc0000006	2510446	2510874	429	360	70	0.005555555555555556	-	UAUGACGGUACUUUCAAUGGCUUCAGGC	134	0	332	2	12	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2511054-2511480	Cluster_2142	Pocillopora_meandrina_HIv1___Sc0000006	2511054	2511480	427	137	77	0.0364963503649635	-	UGACGUGAAAGUUUCUGGACUUGUUUCGA	10	1	132	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2516342-2516950	Cluster_2143	Pocillopora_meandrina_HIv1___Sc0000006	2516342	2516950	609	450	131	0.0	-	UGUCCUUCCUGAAGAUGGUGUAACCAGGA	41	3	389	43	7	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2534327-2535024	Cluster_2144	Pocillopora_meandrina_HIv1___Sc0000006	2534327	2535024	698	1878	321	0.18317358892438765	-	UUUCCUCUGUUACUGGUAGGAACGGACAGU	224	17	1705	39	10	19	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2536782-2537189	Cluster_2145	Pocillopora_meandrina_HIv1___Sc0000006	2536782	2537189	408	136	63	0.007352941176470588	-	UAAACGUCUUUCUGCCAGCAACAGCUUAUC	13	1	134	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2544036-2544465	Cluster_2146	Pocillopora_meandrina_HIv1___Sc0000006	2544036	2544465	430	135	41	0.0	-	UGUUCAAGAAUCUGUCUGGUCAAAUCCAUC	61	1	132	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2544882-2545307	Cluster_2147	Pocillopora_meandrina_HIv1___Sc0000006	2544882	2545307	426	116	53	0.0	-	UAGGAAAGAUCUUGAUGACUAUGAUUCCCA	27	3	106	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2547406-2547834	Cluster_2148	Pocillopora_meandrina_HIv1___Sc0000006	2547406	2547834	429	158	44	0.0	-	CAGGAUUCGACACUGUAAAUUUCAUGGUG	46	1	154	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2552089-2552517	Cluster_2149	Pocillopora_meandrina_HIv1___Sc0000006	2552089	2552517	429	243	83	0.00823045267489712	-	UGGUAUUGGAUACUCUGAGCACUUGAGGGC	32	2	235	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2554191-2554619	Cluster_2150	Pocillopora_meandrina_HIv1___Sc0000006	2554191	2554619	429	148	52	0.0	-	UUGGUUUCCGAGGCACGGUCUUUGACAGU	47	3	142	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2556125-2556552	Cluster_2151	Pocillopora_meandrina_HIv1___Sc0000006	2556125	2556552	428	147	48	0.0	-	UGCAUAUCUGCUGCAGACAAGGUGAAGAAU	43	1	139	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2561826-2564936	Cluster_2152	Pocillopora_meandrina_HIv1___Sc0000006	2561826	2564936	3111	8245	2123	0.01443298969072165	-	UCUUCAAUGAUUUCUUGUGCUGUCUGGG	344	60	7936	37	40	69	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2565126-2566072	Cluster_2153	Pocillopora_meandrina_HIv1___Sc0000006	2565126	2566072	947	2143	680	0.03126458236117592	-	UGUUUGGAGUGUCUGACGGCGUCUGUUC	103	14	2024	12	13	27	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2568267-2568696	Cluster_2154	Pocillopora_meandrina_HIv1___Sc0000006	2568267	2568696	430	821	141	0.0	-	UUUUCACAAUCCUUCUGCUUCACUGUAGC	335	0	811	1	3	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2569202-2570581	Cluster_2155	Pocillopora_meandrina_HIv1___Sc0000006	2569202	2570581	1380	10883	979	0.00027565928512358727	-	UAACACAAACUAUCUGUUGAUUCAUGAGG	1601	151	10443	92	29	99	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2573127-2573703	Cluster_2156	Pocillopora_meandrina_HIv1___Sc0000006	2573127	2573703	577	1486	250	0.010767160161507403	-	UUGCAAAGAUAAAUCCGUGGCGAACUUC	234	8	1460	2	4	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2575795-2576223	Cluster_2157	Pocillopora_meandrina_HIv1___Sc0000006	2575795	2576223	429	141	44	0.0	-	UGUACAAAACUCUGAUGCCAUUAUGCCUC	61	0	134	3	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2577640-2580188	Cluster_2158	Pocillopora_meandrina_HIv1___Sc0000006	2577640	2580188	2549	7839	2139	0.07271335629544584	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	255	80	7171	53	67	207	261	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2580254-2580666	Cluster_2159	Pocillopora_meandrina_HIv1___Sc0000006	2580254	2580666	413	127	73	0.015748031496062992	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	10	0	119	1	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2581562-2583132	Cluster_2160	Pocillopora_meandrina_HIv1___Sc0000006	2581562	2583132	1571	13973	1649	0.03249123309239247	-	UUUGACGGUCCUUUCAAUAUCUUCGGGAU	2078	228	13307	34	63	79	262	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2583203-2583715	Cluster_2161	Pocillopora_meandrina_HIv1___Sc0000006	2583203	2583715	513	6251	485	0.6358982562789953	.	CGGUACUACAAAAAGAUCCUGAUGGACAGU	1598	34	5248	41	14	99	815	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2585919-2586969	Cluster_2162	Pocillopora_meandrina_HIv1___Sc0000006	2585919	2586969	1051	1666	421	0.3979591836734694	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	178	33	1580	10	6	13	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2612856-2613281	Cluster_2163	Pocillopora_meandrina_HIv1___Sc0000006	2612856	2613281	426	223	67	0.017937219730941704	-	UGAUGAUUCAUAUUGUUACAGUUUGU	76	7	199	1	0	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2629857-2630321	Cluster_2164	Pocillopora_meandrina_HIv1___Sc0000006	2629857	2630321	465	2883	371	0.0	-	CUGAUUAAAAUAACCUCACAGAGCUCU	227	572	1734	228	174	47	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2630686-2631145	Cluster_2165	Pocillopora_meandrina_HIv1___Sc0000006	2630686	2631145	460	4457	631	0.0	-	GAGGAAUGUGAAUAUGUCUACUGAUGAUA	529	381	3541	137	138	118	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2631458-2631927	Cluster_2166	Pocillopora_meandrina_HIv1___Sc0000006	2631458	2631927	470	1355	421	0.0	-	UGUCAAUGAAGAACAAUACGA	91	183	658	130	129	130	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2632079-2632574	Cluster_2167	Pocillopora_meandrina_HIv1___Sc0000006	2632079	2632574	496	5325	522	0.0	-	CCACUGUGAUGACUCGAAUAAUCCC	1069	646	2592	275	585	562	665	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2632755-2633251	Cluster_2168	Pocillopora_meandrina_HIv1___Sc0000006	2632755	2633251	497	3177	458	0.0	-	CCACCGUGAUGACUAGAAUA	231	1064	1068	263	218	305	259	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2760526-2760954	Cluster_2169	Pocillopora_meandrina_HIv1___Sc0000006	2760526	2760954	429	316	47	0.9968354430379747	+	UUUCAAGAAAGCUCUGGAAUUGUGUGCAG	109	3	301	1	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2904384-2904807	Cluster_2170	Pocillopora_meandrina_HIv1___Sc0000006	2904384	2904807	424	79	19	0.02531645569620253	-	UUCAAUCACUUGCUUGAGAUCGUGU	20	3	74	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3026686-3027098	Cluster_2171	Pocillopora_meandrina_HIv1___Sc0000006	3026686	3027098	413	138	73	0.9782608695652174	+	UGUGACCGAGGUCUUGAAAA	11	57	14	31	19	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3077648-3078920	Cluster_2172	Pocillopora_meandrina_HIv1___Sc0000006	3077648	3078920	1273	1704	567	0.8761737089201878	+	UUCUGAAGUACUUUCCCAAUAACACUGAAA	55	12	1574	5	14	44	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3080456-3081013	Cluster_2173	Pocillopora_meandrina_HIv1___Sc0000006	3080456	3081013	558	1029	319	0.6861030126336248	.	UAAACAUGCAGCGCCGUCUUCUACUGAGA	154	6	959	6	11	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3082040-3083001	Cluster_2174	Pocillopora_meandrina_HIv1___Sc0000006	3082040	3083001	962	2685	555	0.5426443202979516	.	AAAUGUCUCAAGUUCAGUGGAAUCAGUG	234	11	2514	6	14	26	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3084650-3085078	Cluster_2175	Pocillopora_meandrina_HIv1___Sc0000006	3084650	3085078	429	329	66	0.9756838905775076	+	UAGGACAACUGAGAAUCCACGUAGACUC	121	0	321	0	6	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3160145-3160569	Cluster_2176	Pocillopora_meandrina_HIv1___Sc0000006	3160145	3160569	425	912	90	0.021929824561403508	-	GUUUAUAUCAAGUUUUCAGACUGUG	393	4	633	7	2	146	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3181837-3182252	Cluster_2177	Pocillopora_meandrina_HIv1___Sc0000006	3181837	3182252	416	136	79	0.7205882352941176	.	UGCGGACCUUUGUGAGAACAG	20	62	7	55	10	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3248159-3248782	Cluster_2178	Pocillopora_meandrina_HIv1___Sc0000006	3248159	3248782	624	1392	188	0.021551724137931036	-	UCAUAGAGUUUAAGACAAGCCCAACAGGUC	444	12	1298	15	40	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3295055-3295481	Cluster_2179	Pocillopora_meandrina_HIv1___Sc0000006	3295055	3295481	427	112	36	0.0	-	UGGGUUGACUGAAUUUGUGUGGAAGCUG	26	14	92	0	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3295559-3295986	Cluster_2180	Pocillopora_meandrina_HIv1___Sc0000006	3295559	3295986	428	99	13	0.020202020202020204	-	UAACCCGAGAACUGACACGUGAGUAGUC	66	0	91	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3300115-3300542	Cluster_2181	Pocillopora_meandrina_HIv1___Sc0000006	3300115	3300542	428	116	15	0.034482758620689655	-	UAACCCGAGAACUGACACGUGAGUAGUC	81	1	102	1	0	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3308602-3309513	Cluster_2182	Pocillopora_meandrina_HIv1___Sc0000006	3308602	3309513	912	1076	455	0.08643122676579926	-	UCUGUACUAGAGCAAGAACAAGGUUUU	43	10	976	6	3	10	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3309928-3310589	Cluster_2183	Pocillopora_meandrina_HIv1___Sc0000006	3309928	3310589	662	241	116	0.016597510373443983	-	UAUCAAGUAGAGAUGUCUGAGCCCGAUG	18	2	232	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3447869-3448298	Cluster_2184	Pocillopora_meandrina_HIv1___Sc0000006	3447869	3448298	430	197	47	0.9187817258883249	+	UCAGAUUUUAGGUGGCAUACGAAACACUCA	47	2	190	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3486280-3486972	Cluster_2185	Pocillopora_meandrina_HIv1___Sc0000006	3486280	3486972	693	508	152	1.0	+	GUUAGUGAUGAUGAAGUAAA	80	127	306	24	14	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3756606-3757221	Cluster_2186	Pocillopora_meandrina_HIv1___Sc0000006	3756606	3757221	616	2596	916	1.0	+	CGCGGAUAAAAGACAGUUUGAAUGAGCU	60	690	1143	207	164	196	196	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3772459-3772886	Cluster_2187	Pocillopora_meandrina_HIv1___Sc0000006	3772459	3772886	428	156	41	1.0	+	UUGAAUCUUCUCUCACAUUCUCUGGAGC	56	2	149	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3800420-3802392	Cluster_2188	Pocillopora_meandrina_HIv1___Sc0000006	3800420	3802392	1973	5947	1609	0.9418194047418866	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	498	36	5678	20	24	65	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3803031-3803664	Cluster_2189	Pocillopora_meandrina_HIv1___Sc0000006	3803031	3803664	634	315	154	0.9365079365079365	+	UCAUCUCGGUUUUUGCAAAAUGUCAA	18	2	291	2	1	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3804713-3805120	Cluster_2190	Pocillopora_meandrina_HIv1___Sc0000006	3804713	3805120	408	171	102	0.1871345029239766	-	UUGACGCACAUUUCUGAGCCUAGAAAUC	9	2	145	1	0	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3807595-3808404	Cluster_2191	Pocillopora_meandrina_HIv1___Sc0000006	3807595	3808404	810	4565	643	0.9691128148959475	+	UGCGAUAAAUGGCCAUGUGCAGUGAACC	878	45	4430	4	24	25	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3809026-3809444	Cluster_2192	Pocillopora_meandrina_HIv1___Sc0000006	3809026	3809444	419	104	51	0.9903846153846154	+	AGCCUCAAGGAUGUUAUAAGAUAUG	20	7	92	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3816637-3817067	Cluster_2193	Pocillopora_meandrina_HIv1___Sc0000006	3816637	3817067	431	240	89	0.8833333333333333	+	UGUAAACUCUUGAAGGCUCUGAAAUAGCUCA	37	1	219	6	4	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3821515-3821940	Cluster_2194	Pocillopora_meandrina_HIv1___Sc0000006	3821515	3821940	426	137	48	0.9854014598540146	+	UUCUAGACAAGAUCUUUAAUAAAAAAUAA	25	10	122	2	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3825839-3826580	Cluster_2195	Pocillopora_meandrina_HIv1___Sc0000006	3825839	3826580	742	3215	642	0.977293934681182	+	UAACCGAUUUGAUCAAUGCUUCUGACGUGC	188	15	3132	12	7	24	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3834837-3835264	Cluster_2196	Pocillopora_meandrina_HIv1___Sc0000006	3834837	3835264	428	211	76	1.0	+	UUUAUCAGUAUGAUGACUCUUUUUCACA	19	4	189	14	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3837756-3838530	Cluster_2197	Pocillopora_meandrina_HIv1___Sc0000006	3837756	3838530	775	971	393	0.8475798146240988	+	UAGGCGUUAAACUUUCAUUGAUAA	127	8	762	1	12	13	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3841572-3842002	Cluster_2198	Pocillopora_meandrina_HIv1___Sc0000006	3841572	3842002	431	427	53	1.0	+	UUACUGCACUGAGGAUAACAAUGAUCAAUG	117	3	416	0	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3864910-3865336	Cluster_2199	Pocillopora_meandrina_HIv1___Sc0000006	3864910	3865336	427	120	52	0.9	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	55	3	109	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3870709-3871268	Cluster_2200	Pocillopora_meandrina_HIv1___Sc0000006	3870709	3871268	560	298	142	0.9530201342281879	+	UAUUAUCGAUAAGAAUCCCUAAACAUGU	16	3	282	0	3	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3872110-3872854	Cluster_2201	Pocillopora_meandrina_HIv1___Sc0000006	3872110	3872854	745	328	144	0.948170731707317	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	57	0	319	0	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3887839-3888263	Cluster_2202	Pocillopora_meandrina_HIv1___Sc0000006	3887839	3888263	425	118	46	0.9745762711864406	+	UUUUCCAGAAAGACCAUUAACACUU	21	3	111	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3898252-3898679	Cluster_2203	Pocillopora_meandrina_HIv1___Sc0000006	3898252	3898679	428	286	131	0.9755244755244755	+	UGACUCAGUAGGGGUGUUUCUAUGCGCCAGU	16	1	272	2	1	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3899292-3899913	Cluster_2204	Pocillopora_meandrina_HIv1___Sc0000006	3899292	3899913	622	968	235	0.9896694214876033	+	UGUAAUACUUCAACAAGGGUGCCUCUGUC	137	4	944	1	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3900289-3901926	Cluster_2205	Pocillopora_meandrina_HIv1___Sc0000006	3900289	3901926	1638	2142	716	0.9752567693744164	+	UCUUCAAUGAUUUCUUGUGCUGUCUGGG	137	13	2032	9	14	24	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3907552-3908831	Cluster_2206	Pocillopora_meandrina_HIv1___Sc0000006	3907552	3908831	1280	2205	412	0.910657596371882	+	UGAUUGUGUUUUCCAGGAACGUGUAAUGC	362	6	2018	9	22	39	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3911965-3912393	Cluster_2207	Pocillopora_meandrina_HIv1___Sc0000006	3911965	3912393	429	248	88	0.9798387096774194	+	UCUCUCUGUUUUGGCCACCUGAAUGUG	38	10	234	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3921710-3922139	Cluster_2208	Pocillopora_meandrina_HIv1___Sc0000006	3921710	3922139	430	294	37	1.0	+	UGCUUCUAGAGUCAAGUGGGACAAAGACU	87	0	291	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3953956-3954951	Cluster_2209	Pocillopora_meandrina_HIv1___Sc0000006	3953956	3954951	996	628	347	0.46656050955414013	.	UGAGAUCGUGGAAGGCCAAGUUCCUUGC	31	17	587	4	4	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4058767-4059686	Cluster_2210	Pocillopora_meandrina_HIv1___Sc0000006	4058767	4059686	920	4493	333	0.17694190963721346	-	UUGGUGUCAUAGAAGCUUGUAGUAUCU	1800	63	4291	29	7	56	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4360792-4361219	Cluster_2211	Pocillopora_meandrina_HIv1___Sc0000006	4360792	4361219	428	197	70	0.015228426395939087	-	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	40	2	189	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4527159-4527577	Cluster_2212	Pocillopora_meandrina_HIv1___Sc0000006	4527159	4527577	419	166	23	1.0	+	CGGCCUGAAAAAAAAAAA	64	127	0	16	10	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4597982-4598401	Cluster_2213	Pocillopora_meandrina_HIv1___Sc0000006	4597982	4598401	420	180	10	0.9888888888888889	+	UGAAAAUCUUUGCUCUGAAA	132	175	1	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4669470-4670085	Cluster_2214	Pocillopora_meandrina_HIv1___Sc0000006	4669470	4670085	616	440	213	0.0022727272727272726	-	UAGGAACAUGUCAAUUCGCACAUUC	81	81	269	21	26	15	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4741301-4741763	Cluster_2215	Pocillopora_meandrina_HIv1___Sc0000006	4741301	4741763	463	651	104	0.9984639016897081	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	205	11	633	2	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4761102-4761535	Cluster_2216	Pocillopora_meandrina_HIv1___Sc0000006	4761102	4761535	434	1896	66	0.0026371308016877636	-	UGUACCGUGAAACUGGACACUGAAGUUC	1162	0	1852	0	3	38	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4791746-4792175	Cluster_2217	Pocillopora_meandrina_HIv1___Sc0000006	4791746	4792175	430	179	45	0.08379888268156424	-	UGUGUUCCGAAUUGCACGAAAAAGGUCUAU	62	18	150	0	11	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4866022-4866448	Cluster_2218	Pocillopora_meandrina_HIv1___Sc0000006	4866022	4866448	427	120	53	0.8833333333333333	+	UGAAGGGUUAUACAAAAAUAGGCUGUG	21	1	112	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5140124-5140552	Cluster_2219	Pocillopora_meandrina_HIv1___Sc0000006	5140124	5140552	429	91	32	0.01098901098901099	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	26	0	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5141311-5141739	Cluster_2220	Pocillopora_meandrina_HIv1___Sc0000006	5141311	5141739	429	238	109	0.13445378151260504	-	UAGGCUAGUAGACCAAGUGACGCAGGCGU	31	2	211	0	2	17	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5164016-5164444	Cluster_2221	Pocillopora_meandrina_HIv1___Sc0000006	5164016	5164444	429	2774	92	0.0	-	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1692	8	2760	2	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5165241-5165663	Cluster_2222	Pocillopora_meandrina_HIv1___Sc0000006	5165241	5165663	423	103	39	0.02912621359223301	-	UUUUACGCAUGGGCUUUGAUGGU	17	2	72	1	5	20	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5171945-5172369	Cluster_2223	Pocillopora_meandrina_HIv1___Sc0000006	5171945	5172369	425	251	131	0.6972111553784861	.	UGUAAGACGCACUCUACUCUGUUGU	45	20	196	14	8	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5240370-5240798	Cluster_2224	Pocillopora_meandrina_HIv1___Sc0000006	5240370	5240798	429	388	154	0.04896907216494845	-	UCUGUCUCCUCUGUAAUAAUGACACUGA	67	3	374	1	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5363172-5363597	Cluster_2225	Pocillopora_meandrina_HIv1___Sc0000006	5363172	5363597	426	142	43	0.8169014084507042	+	UGAUUGGUGCAUUUCGAUCCUUGCUGU	25	3	136	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5536688-5537200	Cluster_2226	Pocillopora_meandrina_HIv1___Sc0000006	5536688	5537200	513	5556	1044	0.9935205183585313	+	GCUGAUUGAAAACUUUUCCCAAUA	356	1453	1862	526	434	441	840	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5546629-5547169	Cluster_2227	Pocillopora_meandrina_HIv1___Sc0000006	5546629	5547169	541	1789	424	0.0	-	GAUGGCUUGGGUGCUCAUGGGAACAUAU	186	102	1269	80	113	139	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5547280-5547753	Cluster_2228	Pocillopora_meandrina_HIv1___Sc0000006	5547280	5547753	474	603	229	0.0	-	GCUACUCAGCUGUGACUGU	107	224	169	28	60	59	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5733785-5734203	Cluster_2229	Pocillopora_meandrina_HIv1___Sc0000006	5733785	5734203	419	669	12	0.0014947683109118087	-	CUUUCUGGAGUUAAGGCUU	547	669	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5739668-5740104	Cluster_2230	Pocillopora_meandrina_HIv1___Sc0000006	5739668	5740104	437	439	189	0.9977220956719818	+	GCUGAUUGAAAACUUUUCCCAAUA	28	112	158	38	31	31	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5820329-5821030	Cluster_2231	Pocillopora_meandrina_HIv1___Sc0000006	5820329	5821030	702	586	153	1.0	+	UGCCUCAAAUCAUAAAAUUACUUGU	107	7	573	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5824415-5825515	Cluster_2232	Pocillopora_meandrina_HIv1___Sc0000006	5824415	5825515	1101	1228	364	0.997557003257329	+	UAACCUGUGAAAUAAAAAGAAUGAAGUUGAC	75	6	1165	2	6	18	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5830168-5831006	Cluster_2233	Pocillopora_meandrina_HIv1___Sc0000006	5830168	5831006	839	3270	516	0.9825688073394495	+	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUGG	525	49	3092	26	50	29	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5831442-5832293	Cluster_2234	Pocillopora_meandrina_HIv1___Sc0000006	5831442	5832293	852	1045	320	1.0	+	UUGUCUGCUGUACUCUAACGAUUUGUUUC	65	3	1016	8	2	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5832723-5834537	Cluster_2235	Pocillopora_meandrina_HIv1___Sc0000006	5832723	5834537	1815	10405	1597	0.947909658817876	+	UGCAUCAAGCAGGAAAAAAAGACAAUGA	746	91	9613	71	130	183	317	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5834970-5835396	Cluster_2236	Pocillopora_meandrina_HIv1___Sc0000006	5834970	5835396	427	274	78	1.0	+	UGUUCCACUACAGCCUCUCUGAACUGGAGU	26	3	268	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5837604-5839281	Cluster_2237	Pocillopora_meandrina_HIv1___Sc0000006	5837604	5839281	1678	2274	668	1.0	+	UGAGAUGUCACUAUUGAAUAUUUAACAAGA	179	37	2174	8	9	27	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5839523-5840406	Cluster_2238	Pocillopora_meandrina_HIv1___Sc0000006	5839523	5840406	884	1017	340	1.0	+	UGACAUGCUUAGAAUUUUCAGCUAAAUUGA	149	5	986	2	2	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5840526-5841061	Cluster_2239	Pocillopora_meandrina_HIv1___Sc0000006	5840526	5841061	536	728	242	1.0	+	UGAUAAUAGAGAGACGUUAAUUGUAGCAGU	43	6	699	0	3	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5841188-5841618	Cluster_2240	Pocillopora_meandrina_HIv1___Sc0000006	5841188	5841618	431	810	106	1.0	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	174	9	797	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5841975-5842405	Cluster_2241	Pocillopora_meandrina_HIv1___Sc0000006	5841975	5842405	431	818	109	1.0	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	191	7	804	0	4	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5842763-5843542	Cluster_2242	Pocillopora_meandrina_HIv1___Sc0000006	5842763	5843542	780	7247	397	0.9998620118669794	+	UGCCACAUAGUGAAUUUUGCUGAACGUU	869	43	7074	97	6	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5843551-5843981	Cluster_2243	Pocillopora_meandrina_HIv1___Sc0000006	5843551	5843981	431	835	106	0.9952095808383233	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	177	15	811	1	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5846808-5847473	Cluster_2244	Pocillopora_meandrina_HIv1___Sc0000006	5846808	5847473	666	4338	722	0.03734439834024896	-	UGAAGCGAUAUGAAAGAUCUUGAUGUG	293	27	4181	13	23	30	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5848646-5849074	Cluster_2245	Pocillopora_meandrina_HIv1___Sc0000006	5848646	5849074	429	223	108	0.7040358744394619	.	UGUUGCAAAGGCUAUGGCAAACACUC	15	5	208	7	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5849772-5850691	Cluster_2246	Pocillopora_meandrina_HIv1___Sc0000006	5849772	5850691	920	839	259	0.8247914183551848	+	UACUGAUGGUUUGUCUUUAAACUGAAAUU	87	3	792	4	3	13	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5850812-5851241	Cluster_2247	Pocillopora_meandrina_HIv1___Sc0000006	5850812	5851241	430	274	123	0.20802919708029197	.	UCCCAGCGUAUGAACGACUCUCUUAUUUC	33	0	248	1	1	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5851721-5852502	Cluster_2248	Pocillopora_meandrina_HIv1___Sc0000006	5851721	5852502	782	328	90	1.0	+	UGGACUUUGCUUCUUUUGCCAAUUGUGC	73	3	320	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5858307-5860151	Cluster_2249	Pocillopora_meandrina_HIv1___Sc0000006	5858307	5860151	1845	9361	1415	0.04326460848199978	-	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	3027	33	9050	25	49	80	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5860311-5860882	Cluster_2250	Pocillopora_meandrina_HIv1___Sc0000006	5860311	5860882	572	6263	474	0.9358135079035605	+	UGCAAUGGAUCUAGUACUAUCAAGUUC	2935	24	6080	12	77	33	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5860986-5861969	Cluster_2251	Pocillopora_meandrina_HIv1___Sc0000006	5860986	5861969	984	1294	393	0.7349304482225657	.	UGUUUUGUUUCUGAUUAACCUUGUGC	143	9	1190	23	8	23	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5863646-5865684	Cluster_2252	Pocillopora_meandrina_HIv1___Sc0000006	5863646	5865684	2039	23329	3594	0.062240130309914696	-	UGAGAGAAAUUUUUCUUUGAAAUCUGCAGG	2315	221	21966	142	205	295	500	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5866040-5868415	Cluster_2253	Pocillopora_meandrina_HIv1___Sc0000006	5866040	5868415	2376	5423	1793	0.1919601696477964	-	UGAGGAAUAUAUCAAAGAAGGUCGUGAUC	185	61	5084	88	34	70	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5872014-5873341	Cluster_2254	Pocillopora_meandrina_HIv1___Sc0000006	5872014	5873341	1328	6738	1108	0.9205995844464233	+	UACUUCCAUGACUGGUUGAGGAUAGAUG	992	68	5812	41	51	502	264	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5875872-5877160	Cluster_2255	Pocillopora_meandrina_HIv1___Sc0000006	5875872	5877160	1289	3722	894	0.9239656098871575	+	UCAGCUCUUUCUAACUCUGCAAUUUGAGGU	269	25	3460	23	98	59	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5882690-5883487	Cluster_2256	Pocillopora_meandrina_HIv1___Sc0000006	5882690	5883487	798	7373	623	0.0347212803472128	-	UGCGUGUAAAAGCUGGUCUCAAGAACC	2165	27	7032	88	15	46	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5883592-5884928	Cluster_2257	Pocillopora_meandrina_HIv1___Sc0000006	5883592	5884928	1337	10129	966	0.710435383552177	.	UGUUACUGUAGAUGGGGUUUCCCUAGC	2238	42	8882	15	86	82	1022	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5884948-5885784	Cluster_2258	Pocillopora_meandrina_HIv1___Sc0000006	5884948	5885784	837	5408	798	0.43509615384615385	.	UUUUAUCUCAGGGAAAGCUGCAAAACUG	945	64	4760	50	77	219	238	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5888776-5889198	Cluster_2259	Pocillopora_meandrina_HIv1___Sc0000006	5888776	5889198	423	123	42	1.0	+	UGAUUGUGAUCCGCUGUUCUUGAAAUGAG	31	4	111	3	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5889962-5890386	Cluster_2260	Pocillopora_meandrina_HIv1___Sc0000006	5889962	5890386	425	224	109	1.0	+	UGGUAUCUUCAGGGCUUCUGUCAUUU	32	4	206	0	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5890418-5890908	Cluster_2261	Pocillopora_meandrina_HIv1___Sc0000006	5890418	5890908	491	299	122	1.0	+	UGGUCUUGAUUGCAGGAAGCAGGUGUUA	28	1	285	4	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5891469-5891894	Cluster_2262	Pocillopora_meandrina_HIv1___Sc0000006	5891469	5891894	426	157	72	1.0	+	UCCUCGCUGCAGCAUCUCUAAUUGUAUGGC	23	1	153	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5891954-5892384	Cluster_2263	Pocillopora_meandrina_HIv1___Sc0000006	5891954	5892384	431	189	94	1.0	+	UUGGAUCACAGUUUGUUGCCUCGGACAGGCU	22	1	175	0	5	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5894348-5894781	Cluster_2264	Pocillopora_meandrina_HIv1___Sc0000006	5894348	5894781	434	340	98	0.014705882352941176	-	UGCUCGCUGACAAAGGAAACUCUCACG	54	35	233	0	6	59	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5896720-5897140	Cluster_2265	Pocillopora_meandrina_HIv1___Sc0000006	5896720	5897140	421	150	75	1.0	+	UGAUUUUGAAAACUCUGAUGGCUUUUG	19	3	143	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5899020-5899442	Cluster_2266	Pocillopora_meandrina_HIv1___Sc0000006	5899020	5899442	423	123	51	0.983739837398374	+	UGCAAUAUACAAGGCUCGAUUUCUCAAUG	21	2	115	1	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5901952-5902378	Cluster_2267	Pocillopora_meandrina_HIv1___Sc0000006	5901952	5902378	427	188	72	1.0	+	UGUGUAUCUUCUGAGUUUUGAGUUUGAGC	26	1	180	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5902985-5903418	Cluster_2268	Pocillopora_meandrina_HIv1___Sc0000006	5902985	5903418	434	229	93	1.0	+	UGAAGACAAGGAGAUUGUUGAUGACGUCCGC	23	0	224	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5905241-5905671	Cluster_2269	Pocillopora_meandrina_HIv1___Sc0000006	5905241	5905671	431	184	83	0.9836956521739131	+	UGGAUUUUCAAUUGAUUCUCGAAAUGUUUGG	29	2	179	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5905755-5906180	Cluster_2270	Pocillopora_meandrina_HIv1___Sc0000006	5905755	5906180	426	253	114	0.9920948616600791	+	UCUGACUGAUUACUGCUGUUUCCACUGC	26	7	242	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5907034-5907472	Cluster_2271	Pocillopora_meandrina_HIv1___Sc0000006	5907034	5907472	439	240	89	1.0	+	UCAUUGCGUUGCAUCUUCAGACUUAACUUA	35	5	234	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5908778-5909395	Cluster_2272	Pocillopora_meandrina_HIv1___Sc0000006	5908778	5909395	618	345	148	1.0	+	UUUCCAUUGCUUGAACUUGCCGGUUUU	28	6	324	0	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5910610-5911029	Cluster_2273	Pocillopora_meandrina_HIv1___Sc0000006	5910610	5911029	420	257	163	0.10116731517509728	-	UCAAAGUCCAGUAUCCUCUGCGAGUCAGA	11	40	112	9	16	37	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5917575-5918268	Cluster_2274	Pocillopora_meandrina_HIv1___Sc0000006	5917575	5918268	694	1188	199	0.9932659932659933	+	UAGAUUGGAGGAAACUCUUUCUGGCGGG	307	11	1134	1	9	19	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5920058-5921204	Cluster_2275	Pocillopora_meandrina_HIv1___Sc0000006	5920058	5921204	1147	963	417	0.8213914849428868	+	UACCACGUCUAGCUCCUCGUGCUCGCU	44	9	849	4	21	44	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5922443-5923665	Cluster_2276	Pocillopora_meandrina_HIv1___Sc0000006	5922443	5923665	1223	2115	496	0.8141843971631205	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	512	15	2010	8	9	26	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5926582-5927199	Cluster_2277	Pocillopora_meandrina_HIv1___Sc0000006	5926582	5927199	618	684	261	0.7119883040935673	.	UAAAUUGCCAUGUCUAGUAGACCUAUU	33	7	633	6	11	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5927210-5927773	Cluster_2278	Pocillopora_meandrina_HIv1___Sc0000006	5927210	5927773	564	598	232	0.7959866220735786	.	UAAUUUAUCCAUGUAUUCUUGAAGACA	36	9	507	4	25	32	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5928631-5929446	Cluster_2279	Pocillopora_meandrina_HIv1___Sc0000006	5928631	5929446	816	464	265	0.9137931034482759	+	UGAUUUUGGAAUGUUGUUUACGUUGUG	18	2	440	3	0	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5929820-5930249	Cluster_2280	Pocillopora_meandrina_HIv1___Sc0000006	5929820	5930249	430	144	38	0.9930555555555556	+	UGCAAAACCAUGUACAGUCGAACCUUGAUU	45	5	135	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5930391-5930838	Cluster_2281	Pocillopora_meandrina_HIv1___Sc0000006	5930391	5930838	448	1886	193	1.0	+	UCCAUUCUGCUCCCACGGUUUGAGGACUUG	370	2	1880	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5931431-5931850	Cluster_2282	Pocillopora_meandrina_HIv1___Sc0000006	5931431	5931850	420	221	103	0.995475113122172	+	UGUCUUUAACUCUGCCCUAACAAUUCAGAA	21	11	196	6	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5932642-5933123	Cluster_2283	Pocillopora_meandrina_HIv1___Sc0000006	5932642	5933123	482	281	107	1.0	+	UCUGCAACGGACUUCUAAGGGGUAAAGGC	44	0	277	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5934311-5935770	Cluster_2284	Pocillopora_meandrina_HIv1___Sc0000006	5934311	5935770	1460	1222	509	0.997545008183306	+	UAUCUUGAACUCUGUAAUGAUGGGUGAC	45	26	1142	6	22	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5936236-5937077	Cluster_2285	Pocillopora_meandrina_HIv1___Sc0000006	5936236	5937077	842	973	367	1.0	+	UAUAACAGACUCUGCACCUCUUCUGAGC	45	3	952	2	4	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5940921-5941459	Cluster_2286	Pocillopora_meandrina_HIv1___Sc0000006	5940921	5941459	539	8532	403	1.0	+	UGUGUCGAGCUUCUCUUGUAGCAGGAGU	3284	87	8327	0	56	32	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5941835-5942272	Cluster_2287	Pocillopora_meandrina_HIv1___Sc0000006	5941835	5942272	438	6807	246	0.9989716468341413	+	UUCUGCUGUUUUGGGCUUGCUUUGCCAUC	3792	33	6716	6	15	20	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5947100-5947529	Cluster_2288	Pocillopora_meandrina_HIv1___Sc0000006	5947100	5947529	430	309	36	1.0	+	UCAAACCUUGGCUUGAAUUACCUAUGCACA	190	1	308	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5948137-5948642	Cluster_2289	Pocillopora_meandrina_HIv1___Sc0000006	5948137	5948642	506	6910	359	0.998986975397974	+	UGCUUGAUCCUGCUGUAUCUUUUGAAGGGC	2343	2	6862	4	11	20	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5948646-5949062	Cluster_2290	Pocillopora_meandrina_HIv1___Sc0000006	5948646	5949062	417	200	105	1.0	+	UGUCUGAUCUUCUCCUAGAAACAUUUUAGC	12	0	194	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5952244-5952687	Cluster_2291	Pocillopora_meandrina_HIv1___Sc0000006	5952244	5952687	444	266	82	0.08646616541353383	-	ACGUGUAAGAUCAAGGAAGACAUGUUGAUU	58	3	238	1	3	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5956512-5956930	Cluster_2292	Pocillopora_meandrina_HIv1___Sc0000006	5956512	5956930	419	272	163	0.9963235294117647	+	UCUAGAUUCUGGAUUUGCCUGUUCGUCU	19	2	256	3	6	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5959619-5960273	Cluster_2293	Pocillopora_meandrina_HIv1___Sc0000006	5959619	5960273	655	1137	212	0.920844327176781	+	UAAGUUGAGAGGUCAUAGUAACAUUAGC	139	11	1033	5	6	17	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5960956-5961384	Cluster_2294	Pocillopora_meandrina_HIv1___Sc0000006	5960956	5961384	429	179	57	0.994413407821229	+	UAGGAUUUCUGUAGCUUGACAAGUUGUAG	45	5	167	3	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5962707-5963133	Cluster_2295	Pocillopora_meandrina_HIv1___Sc0000006	5962707	5963133	427	100	31	1.0	+	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	24	0	99	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5963560-5963977	Cluster_2296	Pocillopora_meandrina_HIv1___Sc0000006	5963560	5963977	418	207	101	0.9855072463768116	+	UCGGACAUAAAUACGAUCCAUCAUU	19	1	195	0	0	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5970547-5971262	Cluster_2297	Pocillopora_meandrina_HIv1___Sc0000006	5970547	5971262	716	311	130	1.0	+	UUCAACGUUAUUUGUCUGGGUCUUUACAGC	36	4	303	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5973250-5973678	Cluster_2298	Pocillopora_meandrina_HIv1___Sc0000006	5973250	5973678	429	320	53	1.0	+	UGGGUCUGUGAUUAUGAAGAUGAAAUUC	104	2	313	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5974845-5975816	Cluster_2299	Pocillopora_meandrina_HIv1___Sc0000006	5974845	5975816	972	1146	331	0.9982547993019197	+	UGUAAAAUCUUUUAGGUCUGGCCCUUAUG	169	26	1094	4	4	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5977131-5977728	Cluster_2300	Pocillopora_meandrina_HIv1___Sc0000006	5977131	5977728	598	480	155	1.0	+	UGUAAACAUCUAAUAACUCCUGCGGAGCAGC	68	2	463	0	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5977885-5978419	Cluster_2301	Pocillopora_meandrina_HIv1___Sc0000006	5977885	5978419	535	341	107	0.9882697947214076	+	UCAAACAUUCUUCUGCUCGACUUACUGGC	42	5	320	5	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5978605-5979573	Cluster_2302	Pocillopora_meandrina_HIv1___Sc0000006	5978605	5979573	969	4450	549	0.9793258426966293	+	UCUACCUUAAAUCCCAACUGAUUGCUUUGU	672	53	3974	327	31	24	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5979723-5980153	Cluster_2303	Pocillopora_meandrina_HIv1___Sc0000006	5979723	5980153	431	649	89	0.9938366718027735	+	UGUGUGUUCUAACAGGGUGAUUACUAUAUC	276	27	599	1	2	1	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5982239-5982887	Cluster_2304	Pocillopora_meandrina_HIv1___Sc0000006	5982239	5982887	649	1047	332	0.7459407831900668	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	70	12	951	2	9	36	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5982943-5983370	Cluster_2305	Pocillopora_meandrina_HIv1___Sc0000006	5982943	5983370	428	410	66	0.004878048780487805	-	ACUGAGAUUCUGGCUGGAUUGUUCCACU	167	1	400	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5983705-5984819	Cluster_2306	Pocillopora_meandrina_HIv1___Sc0000006	5983705	5984819	1115	16926	1550	0.206427980621529	.	AAAGAUCUGAACCGACGAAUAGUGUAUGGC	2868	108	15690	37	83	208	800	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5990660-5991085	Cluster_2307	Pocillopora_meandrina_HIv1___Sc0000006	5990660	5991085	426	131	57	0.9847328244274809	+	GAUGAAUGGAGAAACGAUAUGACAAC	29	2	72	2	7	6	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6006867-6007294	Cluster_2308	Pocillopora_meandrina_HIv1___Sc0000006	6006867	6007294	428	371	180	1.0	+	UGAUGCUUUCUAGAUGCUGUAACCAAAAC	27	4	352	0	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6007533-6008373	Cluster_2309	Pocillopora_meandrina_HIv1___Sc0000006	6007533	6008373	841	850	363	0.9941176470588236	+	UGUGUCUUGUUGUAACAAUUGUUGCUUUC	43	15	804	2	3	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6008960-6011701	Cluster_2310	Pocillopora_meandrina_HIv1___Sc0000006	6008960	6011701	2742	9698	1948	0.9763868838935863	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1631	42	9254	31	76	132	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6012823-6014174	Cluster_2311	Pocillopora_meandrina_HIv1___Sc0000006	6012823	6014174	1352	1426	449	0.9985974754558204	+	UGUAUACGUAGUGUCCGAUCUAAAUCCUGA	122	5	1400	4	4	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6014788-6015198	Cluster_2312	Pocillopora_meandrina_HIv1___Sc0000006	6014788	6015198	411	232	148	1.0	+	UCAUCUUCAGAAGACUUCUCCGACACUGC	16	1	226	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6016384-6016812	Cluster_2313	Pocillopora_meandrina_HIv1___Sc0000006	6016384	6016812	429	229	58	0.9039301310043668	+	UGGAUUUUAAAUCGUACAUACCUUCUUA	48	1	207	2	7	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6018363-6018907	Cluster_2314	Pocillopora_meandrina_HIv1___Sc0000006	6018363	6018907	545	441	186	0.81859410430839	+	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	103	6	379	11	13	20	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6019579-6022030	Cluster_2315	Pocillopora_meandrina_HIv1___Sc0000006	6019579	6022030	2452	12200	2960	0.9579508196721311	+	UGAGGACUUUUCAAAUUUAGCUACAGAUU	505	120	11079	85	111	165	640	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6023232-6024969	Cluster_2316	Pocillopora_meandrina_HIv1___Sc0000006	6023232	6024969	1738	2723	1059	0.9618068307014322	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	91	16	2604	9	16	39	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6031801-6032228	Cluster_2317	Pocillopora_meandrina_HIv1___Sc0000006	6031801	6032228	428	180	74	0.9944444444444445	+	UCAUUGCGUUGCAUCUUCAGACUUAACUUA	19	5	170	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6032361-6032928	Cluster_2318	Pocillopora_meandrina_HIv1___Sc0000006	6032361	6032928	568	448	182	0.9107142857142857	+	UGUGGUAGACUUGUUUUUGACAUGGCA	39	10	397	5	9	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6042598-6043627	Cluster_2319	Pocillopora_meandrina_HIv1___Sc0000006	6042598	6043627	1030	604	207	0.9966887417218543	+	UCGUUUGUUCCGAGGAUAAGAUGUACA	89	7	589	2	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6044864-6045288	Cluster_2320	Pocillopora_meandrina_HIv1___Sc0000006	6044864	6045288	425	157	69	1.0	+	UAGGUUAUUGGCAGUGUCUCUUCGAAAAGA	28	3	146	1	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6045497-6046369	Cluster_2321	Pocillopora_meandrina_HIv1___Sc0000006	6045497	6046369	873	528	159	0.9981060606060606	+	CUCUGCUGACUGCAGGACCUUCCUUGC	128	1	511	3	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6067017-6067447	Cluster_2322	Pocillopora_meandrina_HIv1___Sc0000006	6067017	6067447	431	885	169	1.0	+	UUCCUGUACGAUAACACUUAGGUUGCGCA	135	92	756	10	14	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6069995-6070679	Cluster_2323	Pocillopora_meandrina_HIv1___Sc0000006	6069995	6070679	685	1064	363	0.9266917293233082	+	UGCGUGACGAUCAAGAACUUGAGAGAGUGU	134	12	987	8	9	20	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6071058-6072233	Cluster_2324	Pocillopora_meandrina_HIv1___Sc0000006	6071058	6072233	1176	2588	521	0.6228748068006182	.	GAUCUCUUGAAAUGUUCGGAAUUAUGUGG	284	148	2342	37	5	28	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6120475-6121887	Cluster_2325	Pocillopora_meandrina_HIv1___Sc0000006	6120475	6121887	1413	1472	374	0.002717391304347826	-	UACUCUUCGCCAGACGUUUUCCGUACCGAU	148	25	1397	11	12	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6207674-6208092	Cluster_2326	Pocillopora_meandrina_HIv1___Sc0000006	6207674	6208092	419	384	16	0.0	-	CACUUUUGACGGUGGAUC	96	384	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6278811-6279260	Cluster_2327	Pocillopora_meandrina_HIv1___Sc0000006	6278811	6279260	450	990	144	0.3888888888888889	.	UUCUAGCUCGACUUCACGCU	219	496	50	128	289	22	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6286308-6286741	Cluster_2328	Pocillopora_meandrina_HIv1___Sc0000006	6286308	6286741	434	666	180	0.0	-	UGUGUUGCAAUGGCGACGAACAUUG	175	23	568	17	12	15	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6499330-6499750	Cluster_2329	Pocillopora_meandrina_HIv1___Sc0000006	6499330	6499750	421	92	48	0.0	-	UCAGUAAGGAUGGAAACUCUUGGA	13	3	43	5	5	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6766544-6766959	Cluster_2330	Pocillopora_meandrina_HIv1___Sc0000006	6766544	6766959	416	195	120	0.07692307692307693	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	32	6	180	1	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6768801-6769851	Cluster_2331	Pocillopora_meandrina_HIv1___Sc0000006	6768801	6769851	1051	681	344	0.737151248164464	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	27	6	636	4	3	19	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6770111-6770541	Cluster_2332	Pocillopora_meandrina_HIv1___Sc0000006	6770111	6770541	431	625	214	0.912	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	81	5	535	1	1	11	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6812240-6812661	Cluster_2333	Pocillopora_meandrina_HIv1___Sc0000006	6812240	6812661	422	86	41	0.9767441860465116	+	UCCCACAUGGUCUAGUGGUUAGGAUUCA	16	9	68	3	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6838768-6839198	Cluster_2334	Pocillopora_meandrina_HIv1___Sc0000006	6838768	6839198	431	711	105	0.0	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	173	36	646	3	20	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6858520-6858950	Cluster_2335	Pocillopora_meandrina_HIv1___Sc0000006	6858520	6858950	431	457	90	1.0	+	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	111	21	417	1	14	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7024118-7024547	Cluster_2336	Pocillopora_meandrina_HIv1___Sc0000006	7024118	7024547	430	278	58	0.01079136690647482	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	96	3	271	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7083119-7083522	Cluster_2337	Pocillopora_meandrina_HIv1___Sc0000006	7083119	7083522	404	181	130	0.0	-	CUUGUUGGAAAAUAUGGCGGU	9	31	77	24	21	20	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7261372-7261772	Cluster_2338	Pocillopora_meandrina_HIv1___Sc0000006	7261372	7261772	401	157	127	0.006369426751592357	-	GUAUUUUAAAUUGUGAACGGUUU	3	25	58	14	20	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7264399-7264808	Cluster_2339	Pocillopora_meandrina_HIv1___Sc0000006	7264399	7264808	410	329	245	0.00303951367781155	-	CACCGAAGGAGCCGAAUUGGUAGACU	5	61	146	29	26	34	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7265080-7265496	Cluster_2340	Pocillopora_meandrina_HIv1___Sc0000006	7265080	7265496	417	137	115	0.0	-	UUCAUCUUCAGGCUGGCC	3	37	61	7	14	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7496273-7496769	Cluster_2341	Pocillopora_meandrina_HIv1___Sc0000006	7496273	7496769	497	607	183	0.6523887973640856	.	UGCGAUUACAGAGGUGCGUUGGAACUCC	154	19	564	6	6	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7599352-7599934	Cluster_2342	Pocillopora_meandrina_HIv1___Sc0000006	7599352	7599934	583	478	227	0.99581589958159	+	UGUUUGUAGCACGUCCAGUCUGUUGGAGC	32	12	439	1	5	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7600647-7601067	Cluster_2343	Pocillopora_meandrina_HIv1___Sc0000006	7600647	7601067	421	152	92	1.0	+	UGUGUGUUGGAUCCGAGCUCGUAUACACC	8	4	142	1	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7637910-7638338	Cluster_2344	Pocillopora_meandrina_HIv1___Sc0000006	7637910	7638338	429	148	51	0.006756756756756757	-	UGUAUCUUCAGUAUCUUCGUCGCCAGAGC	44	2	141	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7697231-7697658	Cluster_2345	Pocillopora_meandrina_HIv1___Sc0000006	7697231	7697658	428	204	70	0.0	-	UGAUUGACGUACGGUAUUUGAGACGC	24	2	188	2	1	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7786884-7787312	Cluster_2346	Pocillopora_meandrina_HIv1___Sc0000006	7786884	7787312	429	314	200	0.009554140127388535	-	CUCUUGUUGACGGUCUGAAGAGAGCAACA	50	54	167	28	23	24	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7908829-7909247	Cluster_2347	Pocillopora_meandrina_HIv1___Sc0000006	7908829	7909247	419	146	67	0.0	-	GAUAUUCUUGAUUCUGAAAACA	16	51	40	8	27	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7910927-7911409	Cluster_2348	Pocillopora_meandrina_HIv1___Sc0000006	7910927	7911409	483	2741	428	0.00036483035388544326	-	CCAUGUUGGUGUGGUCUGAUGAACUGAAAGU	207	439	1545	246	265	140	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7912046-7912476	Cluster_2349	Pocillopora_meandrina_HIv1___Sc0000006	7912046	7912476	431	448	107	0.0	-	UUCAGUGUUGAACUGUUCACAUUCUGAAAA	115	73	335	23	8	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7912843-7913321	Cluster_2350	Pocillopora_meandrina_HIv1___Sc0000006	7912843	7913321	479	3036	377	0.0009881422924901185	-	ACCUAAUGAUGUUUGGUCUGAUGAACUGAAA	324	152	2429	94	67	90	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8391070-8391499	Cluster_2351	Pocillopora_meandrina_HIv1___Sc0000006	8391070	8391499	430	2130	91	0.00046948356807511736	-	UUCUCUCGAACAUUUUACUAUUUAGGUACC	706	11	1985	1	1	130	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8533930-8534360	Cluster_2352	Pocillopora_meandrina_HIv1___Sc0000006	8533930	8534360	431	149	54	0.053691275167785234	-	UCGAUUCCGCGAUGACUACAAUACGUUCUGC	46	5	138	3	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8556144-8556574	Cluster_2353	Pocillopora_meandrina_HIv1___Sc0000006	8556144	8556574	431	276	196	0.0	-	GGCAGAACUAUGUAAGAACAU	10	56	119	30	17	30	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8844897-8845325	Cluster_2354	Pocillopora_meandrina_HIv1___Sc0000006	8844897	8845325	429	521	24	0.9961612284069098	+	UCGGUUCUUAAAAAAAAAAAAAAAAAA	114	2	462	6	2	9	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8888820-8889249	Cluster_2355	Pocillopora_meandrina_HIv1___Sc0000006	8888820	8889249	430	92	8	0.010869565217391304	-	UGAUAAUCCAAAUUCUUGCGCCUACACAUU	73	1	89	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9039512-9039983	Cluster_2356	Pocillopora_meandrina_HIv1___Sc0000006	9039512	9039983	472	380	79	1.0	+	GAGGGUCAUGGGUUCAGGUCCCAUAUCGGGC	77	90	247	7	22	13	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9046560-9046990	Cluster_2357	Pocillopora_meandrina_HIv1___Sc0000006	9046560	9046990	431	2761	209	0.0003621876131836291	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	942	171	2457	12	77	31	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9050433-9050859	Cluster_2358	Pocillopora_meandrina_HIv1___Sc0000006	9050433	9050859	427	228	61	1.0	+	GUGCUGAUAACGCCGAGGUCGAGAGUU	43	38	97	19	16	24	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9100124-9100614	Cluster_2359	Pocillopora_meandrina_HIv1___Sc0000006	9100124	9100614	491	3065	819	0.0035889070146818925	-	GUUUAUCCGAGGCGCGGUUAUUGCUGA	102	851	1178	237	218	231	350	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9100951-9101407	Cluster_2360	Pocillopora_meandrina_HIv1___Sc0000006	9100951	9101407	457	398	134	1.0	+	UAUUGACUUUUAAAUUUCUCCAGAACGGUG	36	15	337	7	6	10	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9202498-9202981	Cluster_2361	Pocillopora_meandrina_HIv1___Sc0000006	9202498	9202981	484	3221	291	1.0	+	UGCCCAAUGAUUAUCUAUGUUGAACACU	518	679	2171	56	125	69	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9311554-9311977	Cluster_2362	Pocillopora_meandrina_HIv1___Sc0000006	9311554	9311977	424	340	44	0.0	-	UGUCUAUUCCAGGUAACCUCUGAU	170	5	49	13	2	31	240	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9416139-9416555	Cluster_2363	Pocillopora_meandrina_HIv1___Sc0000006	9416139	9416555	417	116	21	0.0	-	UUUUGUUCUAAGAUUUGU	33	102	0	14	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9517732-9518155	Cluster_2364	Pocillopora_meandrina_HIv1___Sc0000006	9517732	9518155	424	530	22	1.0	+	AGUUUUGGUGUUCUUCUGUGUG	297	18	46	2	401	32	31	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9565153-9565579	Cluster_2365	Pocillopora_meandrina_HIv1___Sc0000006	9565153	9565579	427	190	107	0.8578947368421053	+	UGAGUCGAGGUUAUUCACAAUACGAGC	37	2	159	1	5	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9591535-9591944	Cluster_2366	Pocillopora_meandrina_HIv1___Sc0000006	9591535	9591944	410	87	38	0.47126436781609193	.	CCAAGUUCUACUUCAGGACAAGGGACGAG	20	3	79	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9632564-9632985	Cluster_2367	Pocillopora_meandrina_HIv1___Sc0000006	9632564	9632985	422	131	20	0.9847328244274809	+	AGUUUUGGUGUCCUCCUCUGUG	47	1	48	5	72	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9708115-9708566	Cluster_2368	Pocillopora_meandrina_HIv1___Sc0000006	9708115	9708566	452	309	134	0.889967637540453	+	AGUUGACAUAUUGACUGGUACAAACAAGGG	40	14	224	9	12	16	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9738231-9738656	Cluster_2369	Pocillopora_meandrina_HIv1___Sc0000006	9738231	9738656	426	237	102	0.7088607594936709	.	CAGUACCUACAUCUACAAAGCUUGACCGU	21	29	197	1	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9755350-9755777	Cluster_2370	Pocillopora_meandrina_HIv1___Sc0000006	9755350	9755777	428	94	25	1.0	+	UCAGAUUAUGGAACCGCCAACUUUAUGC	21	3	79	2	5	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9755872-9756301	Cluster_2371	Pocillopora_meandrina_HIv1___Sc0000006	9755872	9756301	430	275	29	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	105	0	272	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9769645-9770074	Cluster_2372	Pocillopora_meandrina_HIv1___Sc0000006	9769645	9770074	430	313	40	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	119	1	306	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9790714-9791956	Cluster_2373	Pocillopora_meandrina_HIv1___Sc0000006	9790714	9791956	1243	3330	871	0.04564564564564565	-	UCUUCGCUGAUUUCUUCCCACAGGGACU	254	12	3271	7	2	9	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9792784-9793187	Cluster_2374	Pocillopora_meandrina_HIv1___Sc0000006	9792784	9793187	404	177	102	0.6045197740112994	.	UGCAAACUCGUCUGUAGACUCUGUACA	23	3	170	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9808992-9809421	Cluster_2375	Pocillopora_meandrina_HIv1___Sc0000006	9808992	9809421	430	267	34	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	93	1	264	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9830659-9831089	Cluster_2376	Pocillopora_meandrina_HIv1___Sc0000006	9830659	9831089	431	355	163	0.9859154929577465	+	UUGGAACUUCAGCUGUGAGACGCAGGU	23	4	322	0	1	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9833547-9833990	Cluster_2377	Pocillopora_meandrina_HIv1___Sc0000006	9833547	9833990	444	924	211	0.5865800865800865	.	CCUGAUCGUAAAGACAAACUGCGUG	169	8	811	4	7	22	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9837502-9837929	Cluster_2378	Pocillopora_meandrina_HIv1___Sc0000006	9837502	9837929	428	190	42	0.9473684210526315	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	56	4	177	2	5	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9852912-9853356	Cluster_2379	Pocillopora_meandrina_HIv1___Sc0000006	9852912	9853356	445	381	125	0.13910761154855644	-	UGAGACAGUACACACGAUUUGAUAU	37	0	365	2	0	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9873510-9873939	Cluster_2380	Pocillopora_meandrina_HIv1___Sc0000006	9873510	9873939	430	267	28	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	103	0	263	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9887216-9887645	Cluster_2381	Pocillopora_meandrina_HIv1___Sc0000006	9887216	9887645	430	289	37	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	129	0	281	2	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9909109-9909538	Cluster_2382	Pocillopora_meandrina_HIv1___Sc0000006	9909109	9909538	430	287	29	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	98	1	280	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9926159-9926588	Cluster_2383	Pocillopora_meandrina_HIv1___Sc0000006	9926159	9926588	430	268	30	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	98	0	266	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10280429-10280841	Cluster_2384	Pocillopora_meandrina_HIv1___Sc0000006	10280429	10280841	413	72	29	0.6388888888888888	.	UGUCAGACUCGUCGGAAGAAGAAUCACG	11	0	67	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10292064-10292481	Cluster_2385	Pocillopora_meandrina_HIv1___Sc0000006	10292064	10292481	418	87	19	0.9425287356321839	+	UGAACUACUGCUCGUACUCUAGAUAGG	29	39	41	3	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10393246-10393675	Cluster_2386	Pocillopora_meandrina_HIv1___Sc0000006	10393246	10393675	430	215	46	1.0	+	UGCAAAGAUGUCAGUCAAGAAUAGCCGAGC	78	2	210	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10460785-10461197	Cluster_2387	Pocillopora_meandrina_HIv1___Sc0000006	10460785	10461197	413	115	59	0.8521739130434782	+	UAGAUAACACUCUUGACAGUUCAAGGC	18	0	99	0	0	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10713315-10713742	Cluster_2388	Pocillopora_meandrina_HIv1___Sc0000006	10713315	10713742	428	168	65	0.9821428571428571	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	45	4	155	2	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10793623-10794051	Cluster_2389	Pocillopora_meandrina_HIv1___Sc0000006	10793623	10794051	429	106	30	0.08490566037735849	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	6	99	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10813241-10813670	Cluster_2390	Pocillopora_meandrina_HIv1___Sc0000006	10813241	10813670	430	128	56	0.96875	+	UGUUUACUUUCUUUACAACUUCGGAUACGUG	28	0	124	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10896001-10896432	Cluster_2391	Pocillopora_meandrina_HIv1___Sc0000006	10896001	10896432	432	2807	132	0.010687566797292483	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2122	5	2765	19	9	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10969064-10969550	Cluster_2392	Pocillopora_meandrina_HIv1___Sc0000006	10969064	10969550	487	286	99	0.4125874125874126	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	55	18	250	3	7	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11034947-11035389	Cluster_2393	Pocillopora_meandrina_HIv1___Sc0000006	11034947	11035389	443	324	158	1.0	+	GUUUAUCCGAGGCGCGGUUAUUGCUGA	22	124	98	26	17	28	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11092821-11093342	Cluster_2394	Pocillopora_meandrina_HIv1___Sc0000006	11092821	11093342	522	220	54	0.05	-	UCAACAUGUCUUCCUUUGUCUUACACGUG	53	1	218	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11121673-11122194	Cluster_2395	Pocillopora_meandrina_HIv1___Sc0000006	11121673	11122194	522	191	60	0.05235602094240838	-	UCAACAUGUCUUCCUUUGUCUUACACGUG	44	0	187	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11148434-11149390	Cluster_2396	Pocillopora_meandrina_HIv1___Sc0000006	11148434	11149390	957	2316	319	0.03454231433506045	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	354	7	2238	1	4	45	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11166873-11167506	Cluster_2397	Pocillopora_meandrina_HIv1___Sc0000006	11166873	11167506	634	7773	528	0.06471117972468803	-	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	4114	29	7565	20	6	36	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11167824-11168376	Cluster_2398	Pocillopora_meandrina_HIv1___Sc0000006	11167824	11168376	553	217	71	0.03686635944700461	-	UAUACUCCAAAGGUUCUGAAAACGAAUG	53	1	187	2	4	17	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11206362-11206836	Cluster_2399	Pocillopora_meandrina_HIv1___Sc0000006	11206362	11206836	475	7179	625	0.9881599108510934	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	2982	375	6465	111	107	78	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11370986-11371535	Cluster_2400	Pocillopora_meandrina_HIv1___Sc0000006	11370986	11371535	550	713	253	0.15007012622720897	-	UGUAAGAUCUGUAGCCUUGGUUUGCCGAC	86	39	598	14	10	20	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11373785-11374213	Cluster_2401	Pocillopora_meandrina_HIv1___Sc0000006	11373785	11374213	429	347	141	0.0	-	UCUUUCUUAAAACGGAACGUGUACUUGAA	36	5	330	3	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11375457-11375960	Cluster_2402	Pocillopora_meandrina_HIv1___Sc0000006	11375457	11375960	504	1144	279	0.0034965034965034965	-	UCCGACUCGUGCGACACGACAUCUCUUGAU	151	6	1116	2	3	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11376313-11378565	Cluster_2403	Pocillopora_meandrina_HIv1___Sc0000006	11376313	11378565	2253	114497	2975	0.0039040324200634077	-	UGAUCUUCUUGAAUUUGCCCAUUUACAAUA	27036	261	112238	83	175	791	949	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11378588-11379259	Cluster_2404	Pocillopora_meandrina_HIv1___Sc0000006	11378588	11379259	672	1825	294	0.004383561643835616	-	UGAUUCUUUGACAGUUAACCCUAGUAG	230	11	1580	84	28	111	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11380054-11381266	Cluster_2405	Pocillopora_meandrina_HIv1___Sc0000006	11380054	11381266	1213	2765	649	0.016636528028933093	-	UCAAGAUCUUCCUCUUUGUCGUACCCGGA	440	21	2636	6	35	38	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11381552-11382373	Cluster_2406	Pocillopora_meandrina_HIv1___Sc0000006	11381552	11382373	822	563	221	0.0017761989342806395	-	UGGCCAUUCAUCUAUUGAAAUGAACUUCGAU	127	14	530	2	4	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11384910-11385866	Cluster_2407	Pocillopora_meandrina_HIv1___Sc0000006	11384910	11385866	957	1151	394	0.0034752389226759338	-	UCUGAUUUGGUAAUUGACUUGGCUGGUC	60	13	1061	2	20	18	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11385947-11386666	Cluster_2408	Pocillopora_meandrina_HIv1___Sc0000006	11385947	11386666	720	307	124	0.0	-	UCUUGAAAUUCUAGACUCUUGGAAAUGCA	57	1	299	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11389022-11390065	Cluster_2409	Pocillopora_meandrina_HIv1___Sc0000006	11389022	11390065	1044	7004	713	0.013420902341519133	-	UGCACUCUUUCCUUGAGAAGUUCCUGGAA	2685	120	6712	35	25	25	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11390317-11390721	Cluster_2410	Pocillopora_meandrina_HIv1___Sc0000006	11390317	11390721	405	189	96	0.0	-	UAUUAUCUGUGGCAACUUGUUUUCUAUC	13	8	175	3	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11390733-11391386	Cluster_2411	Pocillopora_meandrina_HIv1___Sc0000006	11390733	11391386	654	1883	362	0.009028146574614976	-	UAAAAUCCGAAAAAUUCGAAAUGGAAGGCUG	1101	20	1810	8	5	20	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11393309-11393718	Cluster_2412	Pocillopora_meandrina_HIv1___Sc0000006	11393309	11393718	410	176	75	0.36363636363636365	.	UCCAUACAAACACAGUAAAUUGGCCGAA	16	0	162	1	0	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11430683-11431107	Cluster_2413	Pocillopora_meandrina_HIv1___Sc0000006	11430683	11431107	425	235	55	0.00425531914893617	-	CGGUGACAAAUAUCAACUAUGGCA	47	15	85	11	2	61	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11491586-11492016	Cluster_2414	Pocillopora_meandrina_HIv1___Sc0000006	11491586	11492016	431	859	87	0.9348079161816065	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	303	12	837	3	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11542304-11543575	Cluster_2415	Pocillopora_meandrina_HIv1___Sc0000006	11542304	11543575	1272	1341	504	0.0790454884414616	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	73	10	1272	7	2	22	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11544445-11544872	Cluster_2416	Pocillopora_meandrina_HIv1___Sc0000006	11544445	11544872	428	146	51	0.0684931506849315	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	63	0	138	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11544956-11545435	Cluster_2417	Pocillopora_meandrina_HIv1___Sc0000006	11544956	11545435	480	324	139	0.05864197530864197	-	UCCAAUCACACACAGUUCUCCUGCGGC	68	1	307	2	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11545757-11546181	Cluster_2418	Pocillopora_meandrina_HIv1___Sc0000006	11545757	11546181	425	225	118	0.05333333333333334	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	19	0	210	1	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11546411-11546826	Cluster_2419	Pocillopora_meandrina_HIv1___Sc0000006	11546411	11546826	416	216	123	0.08796296296296297	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	22	4	200	1	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11581144-11581561	Cluster_2420	Pocillopora_meandrina_HIv1___Sc0000006	11581144	11581561	418	94	20	0.0425531914893617	-	CCCGGGUCUCGGCACCAG	31	92	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11672349-11672776	Cluster_2421	Pocillopora_meandrina_HIv1___Sc0000006	11672349	11672776	428	156	73	0.0	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	37	6	131	9	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11677885-11678302	Cluster_2422	Pocillopora_meandrina_HIv1___Sc0000006	11677885	11678302	418	91	46	0.12087912087912088	-	UCAGAGCAAGAACGACCCCU	19	68	11	8	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11680009-11680439	Cluster_2423	Pocillopora_meandrina_HIv1___Sc0000006	11680009	11680439	431	319	145	0.0438871473354232	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	26	1	309	0	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11680456-11680882	Cluster_2424	Pocillopora_meandrina_HIv1___Sc0000006	11680456	11680882	427	225	118	0.1288888888888889	-	UACUGAUAGUGAAACUGCUCCUUGAACC	17	3	215	2	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11683540-11683967	Cluster_2425	Pocillopora_meandrina_HIv1___Sc0000006	11683540	11683967	428	80	23	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	0	79	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11760004-11760609	Cluster_2426	Pocillopora_meandrina_HIv1___Sc0000006	11760004	11760609	606	2952	308	0.9823848238482384	+	UGAACCGUGCCGAUCUGCUGCCCUUUGA	702	6	2913	5	4	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11762420-11762901	Cluster_2427	Pocillopora_meandrina_HIv1___Sc0000006	11762420	11762901	482	450	71	0.7511111111111111	.	UCCGAAGCCUCGUUUGUAGUCG	108	2	217	0	223	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11811248-11811667	Cluster_2428	Pocillopora_meandrina_HIv1___Sc0000006	11811248	11811667	420	505	9	0.998019801980198	+	UUCCGAAUCUUCUAGUUAGC	401	458	1	37	8	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11830883-11831300	Cluster_2429	Pocillopora_meandrina_HIv1___Sc0000006	11830883	11831300	418	116	9	0.9482758620689655	+	GAUGGAUGGAGACUGCUU	105	111	4	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11993972-11994632	Cluster_2430	Pocillopora_meandrina_HIv1___Sc0000006	11993972	11994632	661	1419	203	0.9992952783650458	+	UUACAUUUGCGACUUCUUCAGAUUGCGAGC	264	40	1210	12	30	71	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12057156-12057627	Cluster_2431	Pocillopora_meandrina_HIv1___Sc0000006	12057156	12057627	472	821	203	0.9987819732034104	+	UGAGACGAAGCACACCGACAUUU	174	52	350	11	37	249	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12087516-12089166	Cluster_2432	Pocillopora_meandrina_HIv1___Sc0000006	12087516	12089166	1651	1523	683	0.1221273801707157	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	80	16	1414	5	6	30	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12089657-12090084	Cluster_2433	Pocillopora_meandrina_HIv1___Sc0000006	12089657	12090084	428	149	55	0.06040268456375839	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	56	0	137	1	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12090168-12090594	Cluster_2434	Pocillopora_meandrina_HIv1___Sc0000006	12090168	12090594	427	331	133	0.06948640483383686	-	UCCAAUCACACACAGUUCUCCUGCGGC	69	1	320	1	1	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12090969-12091590	Cluster_2435	Pocillopora_meandrina_HIv1___Sc0000006	12090969	12091590	622	1470	330	0.036734693877551024	-	UGUUACCGGUCUUGCUAACCACUUGGA	401	7	1390	3	5	15	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12091624-12092032	Cluster_2436	Pocillopora_meandrina_HIv1___Sc0000006	12091624	12092032	409	195	112	0.05128205128205128	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	19	1	188	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12175321-12175749	Cluster_2437	Pocillopora_meandrina_HIv1___Sc0000006	12175321	12175749	429	687	66	0.004366812227074236	-	UGAAGACUGGCCCUGAUAUCAUCAUAU	191	2	666	1	0	15	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12208553-12208974	Cluster_2438	Pocillopora_meandrina_HIv1___Sc0000006	12208553	12208974	422	88	20	0.8068181818181818	+	UACGCAGAGCGGAGCUCACAUACUAAGU	26	16	62	2	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12365265-12365693	Cluster_2439	Pocillopora_meandrina_HIv1___Sc0000006	12365265	12365693	429	94	30	0.010638297872340425	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	47	1	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12369619-12370050	Cluster_2440	Pocillopora_meandrina_HIv1___Sc0000006	12369619	12370050	432	392	148	0.07142857142857142	-	UUGGUGUGUUCAAGUAUCUUUGAUUCUGA	30	1	381	1	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12374555-12375050	Cluster_2441	Pocillopora_meandrina_HIv1___Sc0000006	12374555	12375050	496	2248	184	0.2179715302491103	.	UCCAUCUGUCAGAAAUCCAAACAUGUCUUC	830	1	2208	4	7	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12376022-12376452	Cluster_2442	Pocillopora_meandrina_HIv1___Sc0000006	12376022	12376452	431	734	66	0.035422343324250684	-	UGAAAUGACGAUCACUGAUGAAUCCUUUGUC	327	6	687	10	4	22	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12377153-12378561	Cluster_2443	Pocillopora_meandrina_HIv1___Sc0000006	12377153	12378561	1409	1164	313	0.27405498281786944	.	UCUACUUUGUUGGAUUCACACUGGAUCUUGU	245	12	915	19	29	106	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12380733-12383188	Cluster_2444	Pocillopora_meandrina_HIv1___Sc0000006	12380733	12383188	2456	12167	3009	0.036985288074299336	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	459	122	11033	64	87	197	664	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12383856-12384284	Cluster_2445	Pocillopora_meandrina_HIv1___Sc0000006	12383856	12384284	429	368	159	0.20108695652173914	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	96	3	336	3	9	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12391128-12391714	Cluster_2446	Pocillopora_meandrina_HIv1___Sc0000006	12391128	12391714	587	448	198	0.37276785714285715	.	CAGGAAUGUAGUGCUGAACAACC	21	4	323	27	8	58	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12400733-12401399	Cluster_2447	Pocillopora_meandrina_HIv1___Sc0000006	12400733	12401399	667	3422	696	0.25832846288720046	.	UUUAUACCCAAUACGAUCUUAUCUCUGA	291	19	3277	6	10	51	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12401665-12402086	Cluster_2448	Pocillopora_meandrina_HIv1___Sc0000006	12401665	12402086	422	251	137	0.1394422310756972	-	UGAACUUAACGACACCUAGAUCUGCACAAGC	14	4	218	2	6	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12402282-12403351	Cluster_2449	Pocillopora_meandrina_HIv1___Sc0000006	12402282	12403351	1070	3170	611	0.08706624605678233	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	303	18	3016	8	14	29	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12403742-12404424	Cluster_2450	Pocillopora_meandrina_HIv1___Sc0000006	12403742	12404424	683	298	153	0.11073825503355705	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	35	4	273	3	6	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12407957-12408590	Cluster_2451	Pocillopora_meandrina_HIv1___Sc0000006	12407957	12408590	634	297	101	0.0	-	UCUAUUCUCAAGCUUUUUGUAGCCCGCUGAU	52	0	294	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12418249-12419391	Cluster_2452	Pocillopora_meandrina_HIv1___Sc0000006	12418249	12419391	1143	6656	1275	0.010216346153846154	-	UGUGCAUUCAGGUUUGUCAUUGUCAAUAAC	504	37	6306	23	88	139	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12419449-12420615	Cluster_2453	Pocillopora_meandrina_HIv1___Sc0000006	12419449	12420615	1167	2043	729	0.014684287812041116	-	UGGGAACAUCUUUGAAGUCAUUUUUAUG	98	28	1906	11	33	36	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12421403-12424171	Cluster_2454	Pocillopora_meandrina_HIv1___Sc0000006	12421403	12424171	2769	42978	3088	0.04928102750244311	-	UGAUCAUGGAUUCUAAACUGGUAAUGGCC	13031	545	40578	545	155	429	726	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12425669-12428587	Cluster_2455	Pocillopora_meandrina_HIv1___Sc0000006	12425669	12428587	2919	14255	2532	0.0001403016485443704	-	UUCAUUCUGAGCACGGACCCUCUUGGACGUU	1278	127	13290	42	435	56	305	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12429120-12429804	Cluster_2456	Pocillopora_meandrina_HIv1___Sc0000006	12429120	12429804	685	492	245	0.0	-	UGAGAAGAUCUUUUAUUCGUCGCGGCCAUU	43	1	472	3	9	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12430079-12430838	Cluster_2457	Pocillopora_meandrina_HIv1___Sc0000006	12430079	12430838	760	365	147	0.0	-	UGGGUGUAGUGCUGAAUACUGCAGCAUU	87	6	345	0	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12430971-12431389	Cluster_2458	Pocillopora_meandrina_HIv1___Sc0000006	12430971	12431389	419	224	119	0.0	-	UAAGUUACACUGAUUUAACUCCUUUACA	14	3	216	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12431614-12432345	Cluster_2459	Pocillopora_meandrina_HIv1___Sc0000006	12431614	12432345	732	496	215	0.0	-	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	44	5	473	5	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12432474-12432909	Cluster_2460	Pocillopora_meandrina_HIv1___Sc0000006	12432474	12432909	436	395	149	0.002531645569620253	-	UGAAUCAUCACCGUCAUCUGCAGGUAGC	58	7	372	3	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12435659-12438616	Cluster_2461	Pocillopora_meandrina_HIv1___Sc0000006	12435659	12438616	2958	8068	2388	0.0017352503718393653	-	UUAGAUUUGUGCUUUCUUCAAGAGAACUUGG	386	101	7605	120	51	109	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12438875-12439558	Cluster_2462	Pocillopora_meandrina_HIv1___Sc0000006	12438875	12439558	684	8191	534	0.00024417043096081065	-	UGAACAACAACUGCAGCGAAUAAACA	721	118	7608	180	164	34	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12440581-12443320	Cluster_2463	Pocillopora_meandrina_HIv1___Sc0000006	12440581	12443320	2740	10406	2156	0.022294829905823564	-	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1525	59	9976	24	86	133	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12444136-12444951	Cluster_2464	Pocillopora_meandrina_HIv1___Sc0000006	12444136	12444951	816	29404	1171	0.00027207182696231805	-	UAUUUCAGGCUUCUCAAACAUCAUGUGA	4734	519	28302	110	201	124	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12446807-12450450	Cluster_2465	Pocillopora_meandrina_HIv1___Sc0000006	12446807	12450450	3644	150186	6056	0.0006724994340351298	-	UACGUUGGCUUUGUAGAUUACCCUGGUG	13150	627	140625	3792	517	3053	1572	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12450615-12452430	Cluster_2466	Pocillopora_meandrina_HIv1___Sc0000006	12450615	12452430	1816	24745	3257	0.00036370984037179227	-	UCCGAACUCUUGGCUUCUUGGCUUUGCG	1119	189	23925	122	125	143	241	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12452455-12453488	Cluster_2467	Pocillopora_meandrina_HIv1___Sc0000006	12452455	12453488	1034	1171	544	0.0	-	UGUUAUUGAUUCGUUGCCCGGACUCAUGGC	35	45	1047	9	27	17	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12453604-12457216	Cluster_2468	Pocillopora_meandrina_HIv1___Sc0000006	12453604	12457216	3613	93751	3415	9.599897601092255e-05	-	UGUCCACCCCCCACCGGCUGUUUUUUGGUC	20408	914	90397	328	1040	370	702	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12457222-12458419	Cluster_2469	Pocillopora_meandrina_HIv1___Sc0000006	12457222	12458419	1198	2843	709	0.0	-	UGUAAAUUUAAAACUCUGAUAUCUUGUC	235	21	2736	8	18	30	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12458758-12460546	Cluster_2470	Pocillopora_meandrina_HIv1___Sc0000006	12458758	12460546	1789	48921	2098	0.0011038204452075795	-	UAAGUUGAAGAUUGUAGCAGAAGCAAAAGC	11549	318	47468	252	151	277	455	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12461223-12461652	Cluster_2471	Pocillopora_meandrina_HIv1___Sc0000006	12461223	12461652	430	196	78	0.02040816326530612	-	UUGGCGUCUGUGUCGCAUCUGUGUUGCAU	16	10	183	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12499946-12500349	Cluster_2472	Pocillopora_meandrina_HIv1___Sc0000006	12499946	12500349	404	103	52	0.0	-	GACAGACAGAACUUGAAUGGCCAAGUGUG	31	13	67	9	4	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12650102-12650529	Cluster_2473	Pocillopora_meandrina_HIv1___Sc0000006	12650102	12650529	428	150	57	0.9533333333333334	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	1	143	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12776187-12778005	Cluster_2474	Pocillopora_meandrina_HIv1___Sc0000006	12776187	12778005	1819	1617	666	0.9715522572665429	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	100	14	1546	7	10	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12779371-12780411	Cluster_2475	Pocillopora_meandrina_HIv1___Sc0000006	12779371	12780411	1041	880	400	0.9568181818181818	+	UAACAUCUCUCUUUCCGACUUUAACAGC	42	6	840	0	6	11	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12780550-12781542	Cluster_2476	Pocillopora_meandrina_HIv1___Sc0000006	12780550	12781542	993	1098	454	0.9253187613843351	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	103	8	1022	4	9	10	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12781662-12782153	Cluster_2477	Pocillopora_meandrina_HIv1___Sc0000006	12781662	12782153	492	498	276	0.8112449799196787	+	UCCGUUUCGAGGUAUUUAUUUAGAGCUC	13	4	437	2	9	11	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12792988-12793789	Cluster_2478	Pocillopora_meandrina_HIv1___Sc0000006	12792988	12793789	802	2994	721	0.06579826319305278	-	UCCGAUACAAUAACGCUGUAGCUUUU	462	62	2784	13	16	57	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12794758-12795434	Cluster_2479	Pocillopora_meandrina_HIv1___Sc0000006	12794758	12795434	677	475	252	0.029473684210526315	-	UAGAAAGGAUCCUCUUCGUCUCUUCCAGG	32	2	448	2	1	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12796401-12797079	Cluster_2480	Pocillopora_meandrina_HIv1___Sc0000006	12796401	12797079	679	2177	292	0.011483693155718878	-	UGUCAAAUUCAGGUUGUGUCAGGAGUCUGC	366	9	2115	0	4	33	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13037557-13038343	Cluster_2481	Pocillopora_meandrina_HIv1___Sc0000006	13037557	13038343	787	1846	477	0.9599133261105092	+	UGUAGAAUCAAUCUGUUACUAAGACACC	108	16	1739	15	9	25	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13104441-13105329	Cluster_2482	Pocillopora_meandrina_HIv1___Sc0000006	13104441	13105329	889	946	371	0.7494714587737844	.	UGCGUGUAAAAGCUGGUCUCAAGAACC	144	11	813	11	9	48	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13229818-13230240	Cluster_2483	Pocillopora_meandrina_HIv1___Sc0000006	13229818	13230240	423	266	56	0.22556390977443608	.	UGUGUUUGUGUAGAGUUUUGUGU	73	98	2	28	13	121	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13238438-13238853	Cluster_2484	Pocillopora_meandrina_HIv1___Sc0000006	13238438	13238853	416	198	111	0.7171717171717171	.	UUCCGCCAUGACUGUUAUUGU	14	104	29	40	3	19	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13376534-13376951	Cluster_2485	Pocillopora_meandrina_HIv1___Sc0000006	13376534	13376951	418	92	13	0.9782608695652174	+	ACUGCUGCCGGUCGUUGU	70	91	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13405970-13406383	Cluster_2486	Pocillopora_meandrina_HIv1___Sc0000006	13405970	13406383	414	77	23	0.0	-	GCACAGUCUGUAGAAGAUGACCCUGAGA	29	7	64	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13443605-13444157	Cluster_2487	Pocillopora_meandrina_HIv1___Sc0000006	13443605	13444157	553	217	80	0.9262672811059908	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	33	0	193	1	4	13	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13445396-13446616	Cluster_2488	Pocillopora_meandrina_HIv1___Sc0000006	13445396	13446616	1221	2091	482	0.7895743663318986	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	550	10	1970	6	13	31	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13851754-13852280	Cluster_2489	Pocillopora_meandrina_HIv1___Sc0000006	13851754	13852280	527	7761	1114	0.0005153975003221235	-	UCGUGCAAUUUUUGGAACCCUUA	640	610	3045	763	1523	1244	576	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13862228-13862730	Cluster_2490	Pocillopora_meandrina_HIv1___Sc0000006	13862228	13862730	503	290	148	1.0	+	UGACUCUUGAUAAGUUGUACUCUCCUAGG	15	5	279	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13863717-13864824	Cluster_2491	Pocillopora_meandrina_HIv1___Sc0000006	13863717	13864824	1108	36236	871	0.9979578319902859	+	UAAGAAAUCUUCCACUGAUCGUUGAGUU	7307	376	35166	77	74	187	356	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13865078-13865506	Cluster_2492	Pocillopora_meandrina_HIv1___Sc0000006	13865078	13865506	429	255	94	1.0	+	UGAGGAUGAUGACAUAGCAUAUUGAAGUU	28	5	244	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13867250-13870516	Cluster_2493	Pocillopora_meandrina_HIv1___Sc0000006	13867250	13870516	3267	79918	4395	0.9998873845691835	+	UGCACCAGUUUGACCGUGAUUGCUCGUUGG	6611	1770	75552	545	1027	497	527	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13870567-13871700	Cluster_2494	Pocillopora_meandrina_HIv1___Sc0000006	13870567	13871700	1134	2947	641	1.0	+	UUAUCAUAUGUCUCUGUAGUUUUUACAAC	345	16	2894	10	9	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13871763-13874376	Cluster_2495	Pocillopora_meandrina_HIv1___Sc0000006	13871763	13874376	2614	45200	4660	0.9893805309734514	+	UGCGCCAGUCUUGUUGUGAUUGUCUUUUGGA	3344	775	41369	305	537	876	1338	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13874405-13875001	Cluster_2496	Pocillopora_meandrina_HIv1___Sc0000006	13874405	13875001	597	387	58	0.9974160206718347	+	UGAUUUUUGGAUGCAUAAGAAAUGUACA	202	4	378	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13879584-13881610	Cluster_2497	Pocillopora_meandrina_HIv1___Sc0000006	13879584	13881610	2027	9421	2530	0.8165799808937481	+	UUCUUUCGAUUUUCUUGCAUUUUCUGA	159	126	8166	56	143	367	563	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13881926-13882351	Cluster_2498	Pocillopora_meandrina_HIv1___Sc0000006	13881926	13882351	426	99	35	1.0	+	UGACUCAGCUAGAGUGAACCAUUUGAAGC	19	0	98	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:14024001-14024428	Cluster_2499	Pocillopora_meandrina_HIv1___Sc0000006	14024001	14024428	428	231	47	1.0	+	UGGUUGGACAGUGUUCCAGAAGAGACUG	69	6	209	0	16	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:50715-51144	Cluster_2500	Pocillopora_meandrina_HIv1___Sc0000007	50715	51144	430	469	39	0.997867803837953	+	AACUACUGCUCGUACUCUAGAUAUGAC	111	12	452	2	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:611860-612577	Cluster_2501	Pocillopora_meandrina_HIv1___Sc0000007	611860	612577	718	369	120	0.6883468834688347	.	GCUUGAUGUACGCGAAAGAAAUUCGA	49	17	313	5	9	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:616352-617374	Cluster_2502	Pocillopora_meandrina_HIv1___Sc0000007	616352	617374	1023	2396	466	0.9570116861435726	+	UACGCUGAAAUUUCUGCUUGGGUAGAUG	339	40	2201	73	11	39	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:872994-873470	Cluster_2503	Pocillopora_meandrina_HIv1___Sc0000007	872994	873470	477	45618	603	0.0	-	GGGGAUGUAGCUCAGUGGU	14574	28212	12233	1284	631	740	2518	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:893772-894189	Cluster_2504	Pocillopora_meandrina_HIv1___Sc0000007	893772	894189	418	217	17	1.0	+	AUCGGCCGUGGAUUGGCU	154	212	2	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:969531-970234	Cluster_2505	Pocillopora_meandrina_HIv1___Sc0000007	969531	970234	704	289	134	0.9204152249134948	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	33	4	271	0	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:971464-971893	Cluster_2506	Pocillopora_meandrina_HIv1___Sc0000007	971464	971893	430	278	147	0.8525179856115108	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	29	3	259	0	1	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1122671-1123098	Cluster_2507	Pocillopora_meandrina_HIv1___Sc0000007	1122671	1123098	428	262	57	0.9580152671755725	+	UAUUAUUCAUCUGCUGUCUUUUUGCCUC	68	11	231	11	5	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1154912-1155450	Cluster_2508	Pocillopora_meandrina_HIv1___Sc0000007	1154912	1155450	539	2359	526	0.000847816871555744	-	CCAAUUACUGAUAACUCAGACACUC	182	273	1418	179	126	125	238	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1526279-1526970	Cluster_2509	Pocillopora_meandrina_HIv1___Sc0000007	1526279	1526970	692	243	87	0.9917695473251029	+	UCCGUGUGUUUGUUUGGAUCAUAUCUACGC	28	4	224	3	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1823708-1824268	Cluster_2510	Pocillopora_meandrina_HIv1___Sc0000007	1823708	1824268	561	4212	440	0.957977207977208	+	UAGAGCUCUUGUUUUUUCCACAUCAAUA	1200	133	3803	12	129	56	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1836763-1837175	Cluster_2511	Pocillopora_meandrina_HIv1___Sc0000007	1836763	1837175	413	98	64	0.2653061224489796	.	UAUUGCUGAACAGACGCACG	13	43	20	11	12	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1884502-1885410	Cluster_2512	Pocillopora_meandrina_HIv1___Sc0000007	1884502	1885410	909	515	251	0.945631067961165	+	UAGGUAAUGGCACAAACUGAGAGGCGU	39	3	488	1	3	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1885501-1886315	Cluster_2513	Pocillopora_meandrina_HIv1___Sc0000007	1885501	1886315	815	568	336	0.9295774647887324	+	UCCGUUUCGCUUGACUACUGGGACAAUUG	19	3	541	2	0	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1886403-1887596	Cluster_2514	Pocillopora_meandrina_HIv1___Sc0000007	1886403	1887596	1194	1300	517	0.9323076923076923	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	90	14	1212	7	4	15	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1925271-1925700	Cluster_2515	Pocillopora_meandrina_HIv1___Sc0000007	1925271	1925700	430	135	42	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	36	0	128	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1953727-1954156	Cluster_2516	Pocillopora_meandrina_HIv1___Sc0000007	1953727	1954156	430	211	50	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	58	1	207	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2004532-2004961	Cluster_2517	Pocillopora_meandrina_HIv1___Sc0000007	2004532	2004961	430	114	32	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	25	1	110	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2025510-2025939	Cluster_2518	Pocillopora_meandrina_HIv1___Sc0000007	2025510	2025939	430	115	36	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	39	1	110	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2186450-2186864	Cluster_2519	Pocillopora_meandrina_HIv1___Sc0000007	2186450	2186864	415	83	29	0.012048192771084338	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	18	0	81	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2304432-2304859	Cluster_2520	Pocillopora_meandrina_HIv1___Sc0000007	2304432	2304859	428	180	38	0.25	.	UUGUUGUGUUUUUCGAUGGUGGGCAUCC	56	4	157	6	6	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2321106-2321518	Cluster_2521	Pocillopora_meandrina_HIv1___Sc0000007	2321106	2321518	413	138	83	0.11594202898550725	-	UGUGACCGAGGUCUUGAAAAA	20	53	6	56	14	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2364815-2365242	Cluster_2522	Pocillopora_meandrina_HIv1___Sc0000007	2364815	2365242	428	179	66	0.994413407821229	+	UACGGUAUUUGAGACGCAAUAUGACUCGC	18	2	173	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2399478-2400302	Cluster_2523	Pocillopora_meandrina_HIv1___Sc0000007	2399478	2400302	825	798	152	0.9962406015037594	+	AGCUGAGUGAUACUGACAUUUC	201	118	36	162	367	95	20	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2483714-2484129	Cluster_2524	Pocillopora_meandrina_HIv1___Sc0000007	2483714	2484129	416	429	18	0.0	-	GAGUUCUACAGUCCGA	334	429	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2625697-2626145	Cluster_2525	Pocillopora_meandrina_HIv1___Sc0000007	2625697	2626145	449	513	229	0.1617933723196881	-	UAUGACGUUCCAGAAUCUUUGACAAAA	32	4	485	4	3	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2626667-2627096	Cluster_2526	Pocillopora_meandrina_HIv1___Sc0000007	2626667	2627096	430	144	46	0.013888888888888888	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	20	1	141	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2716658-2718407	Cluster_2527	Pocillopora_meandrina_HIv1___Sc0000007	2716658	2718407	1750	3752	1195	0.09408315565031983	-	UGUUUCGUCUAUGUGCAAUGUUACUU	216	31	3532	18	25	42	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2718799-2719226	Cluster_2528	Pocillopora_meandrina_HIv1___Sc0000007	2718799	2719226	428	136	50	0.09558823529411764	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	52	1	128	0	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2719310-2719789	Cluster_2529	Pocillopora_meandrina_HIv1___Sc0000007	2719310	2719789	480	326	132	0.09815950920245399	-	UCCAAUCACACACAGUUCUCCUGCGGC	66	3	304	2	1	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2720111-2720535	Cluster_2530	Pocillopora_meandrina_HIv1___Sc0000007	2720111	2720535	425	251	123	0.055776892430278883	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	33	3	234	0	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2720765-2721180	Cluster_2531	Pocillopora_meandrina_HIv1___Sc0000007	2720765	2721180	416	200	109	0.07	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	23	3	188	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3019485-3020048	Cluster_2532	Pocillopora_meandrina_HIv1___Sc0000007	3019485	3020048	564	351	210	0.17094017094017094	-	UGUCUUAAAUUGUCUUUGAAGGGCUUGUUG	14	3	322	2	3	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3066364-3066790	Cluster_2533	Pocillopora_meandrina_HIv1___Sc0000007	3066364	3066790	427	194	75	0.0	-	CCUCAUGGACGCCAAACUGAUGCUCAC	28	2	185	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3070005-3070433	Cluster_2534	Pocillopora_meandrina_HIv1___Sc0000007	3070005	3070433	429	98	19	0.0	-	UGAGUUCUACUGUAACGACUGAAUAGACU	29	0	93	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3107655-3108083	Cluster_2535	Pocillopora_meandrina_HIv1___Sc0000007	3107655	3108083	429	269	48	0.011152416356877323	-	AAGAUGUCGAGCGUUUUCGGAACGAGUCG	117	5	250	0	2	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3209174-3209695	Cluster_2536	Pocillopora_meandrina_HIv1___Sc0000007	3209174	3209695	522	403	216	0.0	-	GUGUCAGCUGCCUGCACUGGGCCAGG	41	44	258	16	21	30	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3243241-3243670	Cluster_2537	Pocillopora_meandrina_HIv1___Sc0000007	3243241	3243670	430	150	62	0.9266666666666666	+	UGUAUUUGCUGAUCUAUUUGACAUCCUUGU	19	5	137	0	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3244846-3247558	Cluster_2538	Pocillopora_meandrina_HIv1___Sc0000007	3244846	3247558	2713	4218	2775	0.000474158368895211	-	GGGAAACAGUGUAUACUUUGUAAGU	18	904	1994	293	343	352	332	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3247716-3248683	Cluster_2539	Pocillopora_meandrina_HIv1___Sc0000007	3247716	3248683	968	1279	869	0.0	-	CAUUUGGUCUGUGAGCAAAAGCA	12	281	578	108	120	111	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3248739-3249649	Cluster_2540	Pocillopora_meandrina_HIv1___Sc0000007	3248739	3249649	911	911	622	0.0	-	GCUGUGUCUUAGAGAACC	17	226	374	77	87	72	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3249790-3251091	Cluster_2541	Pocillopora_meandrina_HIv1___Sc0000007	3249790	3251091	1302	1387	993	0.0	-	CAAAAGACUGUAUUGUACUCAAUU	6	353	564	121	111	126	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3251174-3254057	Cluster_2542	Pocillopora_meandrina_HIv1___Sc0000007	3251174	3254057	2884	3403	2374	0.0014692918013517484	-	UUGAAAGUAGCUCUCUGAUUCAC	9	838	1415	271	305	299	275	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3254202-3255319	Cluster_2543	Pocillopora_meandrina_HIv1___Sc0000007	3254202	3255319	1118	1248	844	0.0008012820512820513	-	UUUGAACUAGUGGAGUGGAAAGCU	18	309	514	130	93	104	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3256042-3256965	Cluster_2544	Pocillopora_meandrina_HIv1___Sc0000007	3256042	3256965	924	946	668	0.0	-	AACACUCCGUGUACUCAGACA	10	214	402	84	77	85	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3284710-3285240	Cluster_2545	Pocillopora_meandrina_HIv1___Sc0000007	3284710	3285240	531	949	274	1.0	+	UACCCUCUUCAUUAAAUAGCUUG	61	51	503	65	48	169	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3285428-3285960	Cluster_2546	Pocillopora_meandrina_HIv1___Sc0000007	3285428	3285960	533	363	105	1.0	+	UACCCUCUUCAUUUAAUAGCUUGCUU	79	81	184	35	25	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3286476-3286958	Cluster_2547	Pocillopora_meandrina_HIv1___Sc0000007	3286476	3286958	483	5923	505	1.0	+	CCAUUGAGUGCUGUCUGAGCUGA	689	689	1088	407	1409	1728	602	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3412445-3412875	Cluster_2548	Pocillopora_meandrina_HIv1___Sc0000007	3412445	3412875	431	1491	115	0.9993293091884641	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	504	0	1488	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3416396-3416823	Cluster_2549	Pocillopora_meandrina_HIv1___Sc0000007	3416396	3416823	428	85	12	0.023529411764705882	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	27	1	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3596624-3597052	Cluster_2550	Pocillopora_meandrina_HIv1___Sc0000007	3596624	3597052	429	160	45	0.8375	+	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	63	6	143	5	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3621414-3621871	Cluster_2551	Pocillopora_meandrina_HIv1___Sc0000007	3621414	3621871	458	608	168	0.8980263157894737	+	UUGGACGAAAUUUCGAGGUUCACACUCGUU	87	4	592	3	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3625165-3625966	Cluster_2552	Pocillopora_meandrina_HIv1___Sc0000007	3625165	3625966	802	504	156	0.9107142857142857	+	UGAGACUUUGAUUUUAACUGCU	53	31	340	8	108	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3629143-3629890	Cluster_2553	Pocillopora_meandrina_HIv1___Sc0000007	3629143	3629890	748	1352	457	0.6331360946745562	.	CAAGACUGAAUUCCUUAUCAUUGGCACAUC	170	13	1268	6	6	19	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3631084-3631919	Cluster_2554	Pocillopora_meandrina_HIv1___Sc0000007	3631084	3631919	836	639	253	0.051643192488262914	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	56	2	626	2	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3633716-3634331	Cluster_2555	Pocillopora_meandrina_HIv1___Sc0000007	3633716	3634331	616	1353	158	0.25277161862527714	.	UGCUGUAUGUAAUCUGAUGCAAGAACGC	177	6	1177	100	14	36	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3634376-3635133	Cluster_2556	Pocillopora_meandrina_HIv1___Sc0000007	3634376	3635133	758	1009	179	0.5986124876114965	.	UAAAGAGGACUGAUAAUCUCAGGUUAUC	289	5	780	6	34	31	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3635508-3635937	Cluster_2557	Pocillopora_meandrina_HIv1___Sc0000007	3635508	3635937	430	282	49	0.028368794326241134	-	AAGGAGUUGAAAAGAACAAUGAUGUAGC	61	1	280	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3656762-3657191	Cluster_2558	Pocillopora_meandrina_HIv1___Sc0000007	3656762	3657191	430	242	47	0.06611570247933884	-	AACUGAAGAAUUAAUCUCUAAAAUUGGUAG	97	5	235	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3662339-3662764	Cluster_2559	Pocillopora_meandrina_HIv1___Sc0000007	3662339	3662764	426	167	73	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	17	1	157	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3690491-3691008	Cluster_2560	Pocillopora_meandrina_HIv1___Sc0000007	3690491	3691008	518	490	219	0.004081632653061225	-	UGGGUAUUUCCUCGUCCGCAGAACUGGUU	56	6	475	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3871980-3872681	Cluster_2561	Pocillopora_meandrina_HIv1___Sc0000007	3871980	3872681	702	280	137	0.95	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	35	2	268	0	3	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3873911-3874340	Cluster_2562	Pocillopora_meandrina_HIv1___Sc0000007	3873911	3874340	430	249	143	0.7951807228915663	.	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	29	1	221	1	3	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4514094-4514523	Cluster_2563	Pocillopora_meandrina_HIv1___Sc0000007	4514094	4514523	430	182	25	1.0	+	UCAACAGCCUGAACUUGUCUUCACAAGACU	51	0	181	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4561649-4562110	Cluster_2564	Pocillopora_meandrina_HIv1___Sc0000007	4561649	4562110	462	845	341	0.98698224852071	+	GCAGAGGAAGCGUGCUGGGC	24	403	221	82	76	40	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4596422-4596884	Cluster_2565	Pocillopora_meandrina_HIv1___Sc0000007	4596422	4596884	463	1558	359	1.0	+	AAUAAUGAUGAAUUGCACUGGGUUAUGAUA	118	326	779	63	75	163	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4624808-4625710	Cluster_2566	Pocillopora_meandrina_HIv1___Sc0000007	4624808	4625710	903	1091	294	0.9633363886342805	+	UAAGCAAUCAACUCCAACAAACUCGUCAGA	257	7	1061	8	2	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4800325-4800782	Cluster_2567	Pocillopora_meandrina_HIv1___Sc0000007	4800325	4800782	458	636	178	0.0	-	AAUAAUGAUGAUUUGCACUGA	30	109	200	74	63	109	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4801557-4801981	Cluster_2568	Pocillopora_meandrina_HIv1___Sc0000007	4801557	4801981	425	194	89	0.0	-	AAUGAUGAUGAUUUGCACUGGGU	12	28	87	13	13	30	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4846335-4846744	Cluster_2569	Pocillopora_meandrina_HIv1___Sc0000007	4846335	4846744	410	145	68	0.3103448275862069	.	GAUGAAAGGAAAUGCAAACUUGCUAAAACA	23	1	138	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4889037-4889456	Cluster_2570	Pocillopora_meandrina_HIv1___Sc0000007	4889037	4889456	420	103	34	1.0	+	GAUUAUUUGUAGAACUUGCAGUGU	21	36	31	6	2	1	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4960512-4960935	Cluster_2571	Pocillopora_meandrina_HIv1___Sc0000007	4960512	4960935	424	144	49	0.9444444444444444	+	UUGGGGAUCAAAGACGAAACGAGU	43	2	39	8	0	15	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4962460-4962870	Cluster_2572	Pocillopora_meandrina_HIv1___Sc0000007	4962460	4962870	411	130	64	0.0	-	UGUAAGUGUAGCCCUGAGUAUCGAUCAGC	17	2	121	6	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5045345-5045793	Cluster_2573	Pocillopora_meandrina_HIv1___Sc0000007	5045345	5045793	449	536	384	0.0	-	AAUUGAUUUUCGUGAAGCUGUCGUU	7	121	244	45	41	37	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5048040-5048457	Cluster_2574	Pocillopora_meandrina_HIv1___Sc0000007	5048040	5048457	418	265	191	0.0	-	GGAUGAAUCUGACAGCGACU	7	58	121	26	23	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5147125-5147543	Cluster_2575	Pocillopora_meandrina_HIv1___Sc0000007	5147125	5147543	419	201	97	0.6716417910447762	.	UAGGAGAUUGUACCUUGUGGAGUUAUC	30	2	181	1	4	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5147626-5148534	Cluster_2576	Pocillopora_meandrina_HIv1___Sc0000007	5147626	5148534	909	4554	415	0.9628897672375933	+	UAAGAUCUCUUCGGUCAGAUCGUCACGG	1689	26	4471	7	9	10	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5192655-5193083	Cluster_2577	Pocillopora_meandrina_HIv1___Sc0000007	5192655	5193083	429	119	47	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	36	0	112	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5193672-5194081	Cluster_2578	Pocillopora_meandrina_HIv1___Sc0000007	5193672	5194081	410	73	33	0.1232876712328767	-	UCUUUCCAUUUACAGACUCAAGUGGCUGU	17	0	71	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5194635-5195063	Cluster_2579	Pocillopora_meandrina_HIv1___Sc0000007	5194635	5195063	429	138	47	0.0	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	38	0	131	0	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5223879-5224288	Cluster_2580	Pocillopora_meandrina_HIv1___Sc0000007	5223879	5224288	410	94	27	0.3191489361702128	.	AGUGUCAGAAUGCAAUGCCUACUUAUCCCC	22	3	82	4	4	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5228967-5229397	Cluster_2581	Pocillopora_meandrina_HIv1___Sc0000007	5228967	5229397	431	456	108	0.015350877192982455	-	UGUUCAUGCUGUGCUUGACGAGCUUGUC	114	8	439	0	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5229741-5230355	Cluster_2582	Pocillopora_meandrina_HIv1___Sc0000007	5229741	5230355	615	373	161	0.06702412868632708	-	UCAAAUACAACACCAAAAGAC	52	12	275	56	8	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5262936-5263347	Cluster_2583	Pocillopora_meandrina_HIv1___Sc0000007	5262936	5263347	412	137	89	0.18248175182481752	-	UAUACGAACAGAUCAGUUCCUCCGA	7	7	114	1	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5303452-5304112	Cluster_2584	Pocillopora_meandrina_HIv1___Sc0000007	5303452	5304112	661	334	110	0.9610778443113772	+	UGUUUACGGACGGUCCUUAUGUUGUGGAG	41	5	317	1	3	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5304523-5304950	Cluster_2585	Pocillopora_meandrina_HIv1___Sc0000007	5304523	5304950	428	125	54	0.904	+	UCUAGUUCCCGAUCGUUGGAAUGCCACU	20	2	119	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5306438-5306997	Cluster_2586	Pocillopora_meandrina_HIv1___Sc0000007	5306438	5306997	560	932	248	0.971030042918455	+	UGGACGUACGCAUUCACGAUCUCGCUCGUU	69	0	895	8	2	4	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5310720-5311147	Cluster_2587	Pocillopora_meandrina_HIv1___Sc0000007	5310720	5311147	428	240	101	0.2833333333333333	.	UGGACCGUACGAAUCUCACUGAUCGAC	37	53	147	27	5	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5326494-5327037	Cluster_2588	Pocillopora_meandrina_HIv1___Sc0000007	5326494	5327037	544	1167	312	1.0	+	UGUAGAUUACAUUGUCGGCACAUU	196	79	432	86	80	154	336	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5327132-5327635	Cluster_2589	Pocillopora_meandrina_HIv1___Sc0000007	5327132	5327635	504	460	237	0.9978260869565218	+	UGCAGGACAAGAGAAAAGAAUU	27	64	213	42	54	33	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5333247-5333666	Cluster_2590	Pocillopora_meandrina_HIv1___Sc0000007	5333247	5333666	420	249	169	0.020080321285140562	-	GUAAGCUUUGUCAGCACUCUACAGAUUUGU	11	48	108	23	16	33	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5341789-5342205	Cluster_2591	Pocillopora_meandrina_HIv1___Sc0000007	5341789	5342205	417	142	69	0.0	-	GCAGAUGAUAAAUGCUCCUUGACUGUGGCA	33	27	95	6	3	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5497876-5498310	Cluster_2592	Pocillopora_meandrina_HIv1___Sc0000007	5497876	5498310	435	284	196	0.0	-	CUCUUCUACGCUGGACAACCUCUAGA	10	85	110	38	19	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5579669-5580098	Cluster_2593	Pocillopora_meandrina_HIv1___Sc0000007	5579669	5580098	430	353	42	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACC	213	3	329	0	1	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5636610-5637039	Cluster_2594	Pocillopora_meandrina_HIv1___Sc0000007	5636610	5637039	430	336	41	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACC	187	0	319	0	5	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5688875-5689904	Cluster_2595	Pocillopora_meandrina_HIv1___Sc0000007	5688875	5689904	1030	18150	1557	0.0	-	GUGGCAACUUUGCUAGUGAACU	1472	882	8002	507	4596	1759	2404	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5886330-5886758	Cluster_2596	Pocillopora_meandrina_HIv1___Sc0000007	5886330	5886758	429	128	31	0.03125	-	AUCUAAACGAACUUGUUUUUCUUAUGAGCA	55	1	125	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6376617-6377151	Cluster_2597	Pocillopora_meandrina_HIv1___Sc0000007	6376617	6377151	535	705	155	1.0	+	UGGCAUUUGUAAAGCCCACGCGACGU	101	29	605	20	14	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6394917-6395341	Cluster_2598	Pocillopora_meandrina_HIv1___Sc0000007	6394917	6395341	425	136	41	0.029411764705882353	-	GGGGGCAUAGCUCAGUGGUAGAGCA	23	10	78	8	17	2	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6616417-6616844	Cluster_2599	Pocillopora_meandrina_HIv1___Sc0000007	6616417	6616844	428	267	68	0.0449438202247191	-	UGAUAAACCUGUAGCUGAAGCUUCUGCA	83	3	246	3	6	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6749085-6749513	Cluster_2600	Pocillopora_meandrina_HIv1___Sc0000007	6749085	6749513	429	234	41	0.017094017094017096	-	AACUGAAGAAUCGAUCUCUGAAACCGAUA	57	3	218	0	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6929571-6929998	Cluster_2601	Pocillopora_meandrina_HIv1___Sc0000007	6929571	6929998	428	291	75	0.13745704467353953	-	UGAAACUCUGAUCUGAAAACAUUUGUC	80	15	262	4	0	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6983631-6984060	Cluster_2602	Pocillopora_meandrina_HIv1___Sc0000007	6983631	6984060	430	84	20	0.011904761904761904	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	28	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6986003-6986430	Cluster_2603	Pocillopora_meandrina_HIv1___Sc0000007	6986003	6986430	428	90	31	0.022222222222222223	-	AACUGAAGAAUCAACCUCUGAAACCGAUA	48	1	83	3	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7044680-7045107	Cluster_2604	Pocillopora_meandrina_HIv1___Sc0000007	7044680	7045107	428	212	75	0.0047169811320754715	-	UGCAGAGACUCUUGGGAACCAAAGCUCAUU	44	1	204	4	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7045916-7046838	Cluster_2605	Pocillopora_meandrina_HIv1___Sc0000007	7045916	7046838	923	1948	499	0.0	-	UCGGCCACGAUCUUUCUUGUAAACUAGAAA	218	12	1888	9	3	17	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7046891-7047410	Cluster_2606	Pocillopora_meandrina_HIv1___Sc0000007	7046891	7047410	520	574	165	0.0	-	UGAUAUCAAUAUGACGUCAUAACCGUGGGA	123	2	548	3	3	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7082683-7083500	Cluster_2607	Pocillopora_meandrina_HIv1___Sc0000007	7082683	7083500	818	689	207	0.40493468795355586	.	UGGACCACAAACUCUGACCCUAAGCUUAUU	91	11	583	8	13	16	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7083967-7084500	Cluster_2608	Pocillopora_meandrina_HIv1___Sc0000007	7083967	7084500	534	2060	239	0.962135922330097	+	UUUGAUUCCGAAAAAAUGUAAUCUUCUGC	1141	19	1982	5	15	24	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7153238-7154927	Cluster_2609	Pocillopora_meandrina_HIv1___Sc0000007	7153238	7154927	1690	9246	2298	0.9282933160285529	+	UGAUAGACUGCACGACGAUUUACGUCA	528	87	8413	69	67	260	350	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7154981-7155658	Cluster_2610	Pocillopora_meandrina_HIv1___Sc0000007	7154981	7155658	678	8083	541	0.9975256711616974	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2150	11	7952	4	49	23	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7248731-7249152	Cluster_2611	Pocillopora_meandrina_HIv1___Sc0000007	7248731	7249152	422	102	39	0.09803921568627451	-	UCUUGCCAUAUGAGAUGACUACUGA	29	6	60	1	14	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7355065-7355542	Cluster_2612	Pocillopora_meandrina_HIv1___Sc0000007	7355065	7355542	478	2292	370	1.0	+	GCCCCAAUGAUUAUUUGUAUUGUAGAGU	248	257	1246	141	262	175	211	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7480715-7481625	Cluster_2613	Pocillopora_meandrina_HIv1___Sc0000007	7480715	7481625	911	868	314	0.8963133640552995	+	UGGGUCGUAUUCCUAAAUCUUGAGCAA	66	15	780	13	8	12	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7611857-7612286	Cluster_2614	Pocillopora_meandrina_HIv1___Sc0000007	7611857	7612286	430	90	26	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	22	0	89	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7614942-7615369	Cluster_2615	Pocillopora_meandrina_HIv1___Sc0000007	7614942	7615369	428	224	121	0.8794642857142857	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	13	3	213	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7615385-7615815	Cluster_2616	Pocillopora_meandrina_HIv1___Sc0000007	7615385	7615815	431	309	132	0.9644012944983819	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	19	1	300	3	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7637557-7638158	Cluster_2617	Pocillopora_meandrina_HIv1___Sc0000007	7637557	7638158	602	691	390	0.001447178002894356	-	AUUGCUAAUGGAUUUGCUGAGAAGU	21	192	318	50	50	38	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7639152-7639561	Cluster_2618	Pocillopora_meandrina_HIv1___Sc0000007	7639152	7639561	410	176	131	0.0	-	GCAGAAGGAACCAUUGGCU	7	70	58	12	11	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7640267-7640674	Cluster_2619	Pocillopora_meandrina_HIv1___Sc0000007	7640267	7640674	408	74	48	0.0	-	CGUGUGGAACGGACGUCAAAU	4	32	15	10	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7641666-7642131	Cluster_2620	Pocillopora_meandrina_HIv1___Sc0000007	7641666	7642131	466	334	224	0.0029940119760479044	-	GGCAACGCCAGGUCUGUGUAUUUCGUGC	9	100	133	14	40	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7650244-7650717	Cluster_2621	Pocillopora_meandrina_HIv1___Sc0000007	7650244	7650717	474	60378	1932	0.9986418894299248	+	CACCCCUCUCCGCUCAUCGACCUCAUC	4637	5431	48288	1645	1597	1566	1851	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7651332-7651803	Cluster_2622	Pocillopora_meandrina_HIv1___Sc0000007	7651332	7651803	472	42210	1156	0.9966121772091922	+	CACCCCUCUCCGCCUAUCGACCUCAU	3974	7890	28666	1701	1031	1368	1554	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7651963-7652545	Cluster_2623	Pocillopora_meandrina_HIv1___Sc0000007	7651963	7652545	583	1179	266	0.556403731976251	.	UUUUGACUACCAAUGGAACCAGAAAGU	140	152	857	47	34	15	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7670315-7670767	Cluster_2624	Pocillopora_meandrina_HIv1___Sc0000007	7670315	7670767	453	3069	118	1.0	+	UCAUGUAGAUGCGCAUGUCCGG	813	1158	101	69	1631	101	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7794359-7794782	Cluster_2625	Pocillopora_meandrina_HIv1___Sc0000007	7794359	7794782	424	288	208	1.0	+	AUCUUCGAUCACAGGGACUGU	7	82	105	43	15	16	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8002703-8003120	Cluster_2626	Pocillopora_meandrina_HIv1___Sc0000007	8002703	8003120	418	312	41	1.0	+	AACCUCGCUCUGCUACCA	184	312	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8052923-8053350	Cluster_2627	Pocillopora_meandrina_HIv1___Sc0000007	8052923	8053350	428	142	37	0.9929577464788732	+	UGGAAUUCGAAGCAAGUAACAAUGGACA	36	2	135	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8205880-8206297	Cluster_2628	Pocillopora_meandrina_HIv1___Sc0000007	8205880	8206297	418	102	53	0.8137254901960784	+	UCUCGGCAUCUAAUCUCCAUU	26	34	0	60	4	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8242890-8243445	Cluster_2629	Pocillopora_meandrina_HIv1___Sc0000007	8242890	8243445	556	1040	112	0.05	-	UUGGGUACUGGUGCACUGG	550	593	420	5	8	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8285011-8285444	Cluster_2630	Pocillopora_meandrina_HIv1___Sc0000007	8285011	8285444	434	28543	236	0.0015765686858424132	-	UAACUUCAACUAGAUCGAAAUGCUCGUGA	20727	34	28387	6	5	4	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8355090-8355519	Cluster_2631	Pocillopora_meandrina_HIv1___Sc0000007	8355090	8355519	430	146	13	1.0	+	CAGCCUGAAAAAAAAAAAAAAAAAAAAAAA	35	1	143	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8508721-8509201	Cluster_2632	Pocillopora_meandrina_HIv1___Sc0000007	8508721	8509201	481	2208	265	0.0	-	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	690	86	1954	76	63	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8848491-8848918	Cluster_2633	Pocillopora_meandrina_HIv1___Sc0000007	8848491	8848918	428	234	95	0.9786324786324786	+	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	38	1	228	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8849560-8849989	Cluster_2634	Pocillopora_meandrina_HIv1___Sc0000007	8849560	8849989	430	437	116	0.9702517162471396	+	UAUCGUCUUGUUUCUGUUCUGACCCGAAC	79	1	418	0	4	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8903232-8903974	Cluster_2635	Pocillopora_meandrina_HIv1___Sc0000007	8903232	8903974	743	481	352	0.997920997920998	+	UUUGGACUUGAGCGAAAGCGUCG	7	88	209	41	42	59	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8912961-8913666	Cluster_2636	Pocillopora_meandrina_HIv1___Sc0000007	8912961	8913666	706	345	258	0.9971014492753624	+	GUCAAAGGAUAACAGAGAACGGACA	12	62	180	23	30	29	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8992161-8992652	Cluster_2637	Pocillopora_meandrina_HIv1___Sc0000007	8992161	8992652	492	302	128	0.9933774834437086	+	CCUUCGAUAGCUCAGUUGGU	51	126	81	22	17	24	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8995452-8995931	Cluster_2638	Pocillopora_meandrina_HIv1___Sc0000007	8995452	8995931	480	63519	2185	0.9985358711566618	+	CCCCCCUCCCCGCCUUAUGACCUCAUC	3032	19038	34978	3954	2723	1389	1437	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8997769-8998243	Cluster_2639	Pocillopora_meandrina_HIv1___Sc0000007	8997769	8998243	475	220462	3497	0.9999364969926791	+	CGCCCCUCCCCGCCCUUUGACCUCAUU	20074	45647	138207	9324	15583	8198	3503	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9006638-9007111	Cluster_2640	Pocillopora_meandrina_HIv1___Sc0000007	9006638	9007111	474	5778	603	0.9998269297334718	+	CGCCCCUCCCCGCCCUUUGACCUCAUU	521	1138	3746	254	350	201	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9011782-9012203	Cluster_2641	Pocillopora_meandrina_HIv1___Sc0000007	9011782	9012203	422	114	33	0.05263157894736842	-	UCGAAUCCGGCUCGAAGGACCA	32	17	14	7	35	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9075748-9076178	Cluster_2642	Pocillopora_meandrina_HIv1___Sc0000007	9075748	9076178	431	528	70	0.007575757575757576	-	UGACAAUCAUGCUGCUAAGUUCCUACGC	167	2	521	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9143220-9143648	Cluster_2643	Pocillopora_meandrina_HIv1___Sc0000007	9143220	9143648	429	350	114	0.03428571428571429	-	AAUGGGAAAACGAGAACAGCGUGA	43	6	176	11	3	54	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9194276-9194692	Cluster_2644	Pocillopora_meandrina_HIv1___Sc0000007	9194276	9194692	417	139	66	0.05755395683453238	-	UGUGUUCUCUUUCAAGUCUAGUCUUGUU	16	3	130	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9194835-9195263	Cluster_2645	Pocillopora_meandrina_HIv1___Sc0000007	9194835	9195263	429	172	36	0.0	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	92	0	168	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9448844-9449271	Cluster_2646	Pocillopora_meandrina_HIv1___Sc0000007	9448844	9449271	428	180	69	0.9944444444444445	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	33	2	168	0	2	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9450565-9450994	Cluster_2647	Pocillopora_meandrina_HIv1___Sc0000007	9450565	9450994	430	109	43	0.9174311926605505	+	UGAACUUGAACUAUUUGCUGGAGACGAAAG	30	0	106	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9521198-9521610	Cluster_2648	Pocillopora_meandrina_HIv1___Sc0000007	9521198	9521610	413	124	75	0.9758064516129032	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	12	0	111	1	5	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9521676-9522721	Cluster_2649	Pocillopora_meandrina_HIv1___Sc0000007	9521676	9522721	1046	2531	740	0.9541683129197945	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	258	31	2396	11	22	30	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9522737-9524224	Cluster_2650	Pocillopora_meandrina_HIv1___Sc0000007	9522737	9524224	1488	4143	1302	0.9003137822833696	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	163	52	3691	25	28	161	186	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9526545-9526972	Cluster_2651	Pocillopora_meandrina_HIv1___Sc0000007	9526545	9526972	428	149	58	0.26174496644295303	.	UUAUUUCACAUGAUUUGACAGAAGCCCU	22	3	126	4	0	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9960932-9961359	Cluster_2652	Pocillopora_meandrina_HIv1___Sc0000007	9960932	9961359	428	107	19	0.9906542056074766	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCG	53	0	107	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10057321-10057751	Cluster_2653	Pocillopora_meandrina_HIv1___Sc0000007	10057321	10057751	431	435	96	0.006896551724137931	-	UAAGACUGACGAAGGCUAAGGUGAACAGC	100	4	419	1	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10058873-10059300	Cluster_2654	Pocillopora_meandrina_HIv1___Sc0000007	10058873	10059300	428	296	87	0.14189189189189189	-	UGUACUUUCUUUGGGCCAUGUAAUCU	73	10	271	4	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10064882-10065311	Cluster_2655	Pocillopora_meandrina_HIv1___Sc0000007	10064882	10065311	430	266	75	0.13157894736842105	-	UUGUCUGGAUUGUACACUUUGAAGUGC	28	0	261	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10065343-10065769	Cluster_2656	Pocillopora_meandrina_HIv1___Sc0000007	10065343	10065769	427	203	102	0.9507389162561576	+	AAGGACCGCAGAGUUUUCCAGAUG	27	9	143	4	1	2	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10065933-10066449	Cluster_2657	Pocillopora_meandrina_HIv1___Sc0000007	10065933	10066449	517	1829	377	0.48496446145434663	.	GGAUGCUGAAACCAAUUGAUUAACUGAUC	292	6	1740	2	8	30	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10068802-10069229	Cluster_2658	Pocillopora_meandrina_HIv1___Sc0000007	10068802	10069229	428	128	26	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUG	49	0	117	1	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10079401-10079831	Cluster_2659	Pocillopora_meandrina_HIv1___Sc0000007	10079401	10079831	431	1019	97	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUG	321	3	974	2	5	10	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10081788-10082212	Cluster_2660	Pocillopora_meandrina_HIv1___Sc0000007	10081788	10082212	425	87	45	1.0	+	UUUUCCUGGGCUCGCAGCUUUCUCUGUU	11	0	86	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10085918-10086347	Cluster_2661	Pocillopora_meandrina_HIv1___Sc0000007	10085918	10086347	430	315	65	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUA	122	3	302	1	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10261325-10261861	Cluster_2662	Pocillopora_meandrina_HIv1___Sc0000007	10261325	10261861	537	3145	623	0.11128775834658187	-	ACAAGCGAUAUGUGGACCUU	409	665	2241	45	64	37	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10262068-10262496	Cluster_2663	Pocillopora_meandrina_HIv1___Sc0000007	10262068	10262496	429	184	44	0.010869565217391304	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	69	0	172	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10821461-10821888	Cluster_2664	Pocillopora_meandrina_HIv1___Sc0000007	10821461	10821888	428	90	12	0.011111111111111112	-	UACCAAGGUCUUGUAGUCUAGUACAACU	53	0	89	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10822956-10823397	Cluster_2665	Pocillopora_meandrina_HIv1___Sc0000007	10822956	10823397	442	1386	158	0.0670995670995671	-	UGCGAUCGCCAUGAAAUGAUUCUGGG	404	13	1344	2	8	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11010953-11011762	Cluster_2666	Pocillopora_meandrina_HIv1___Sc0000007	11010953	11011762	810	281	124	0.7224199288256228	.	UGUUCAACUCUUUCAAUGGCGGCUGUG	22	0	265	0	5	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11091897-11092324	Cluster_2667	Pocillopora_meandrina_HIv1___Sc0000007	11091897	11092324	428	76	23	0.02631578947368421	-	UGUGGAUAAUUUAAUAACUGCAGUAGGGA	17	0	75	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11146444-11146933	Cluster_2668	Pocillopora_meandrina_HIv1___Sc0000007	11146444	11146933	490	469	139	0.06396588486140725	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	73	10	399	4	6	13	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11171896-11172325	Cluster_2669	Pocillopora_meandrina_HIv1___Sc0000007	11171896	11172325	430	620	99	0.0467741935483871	-	UUAGACAAGGAGAAUUCCAGC	114	54	390	153	3	1	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11357092-11358413	Cluster_2670	Pocillopora_meandrina_HIv1___Sc0000007	11357092	11358413	1322	1455	479	0.9147766323024055	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	95	13	1369	4	6	28	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11358633-11359288	Cluster_2671	Pocillopora_meandrina_HIv1___Sc0000007	11358633	11359288	656	628	314	0.5955414012738853	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	33	8	558	4	7	24	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11359313-11360084	Cluster_2672	Pocillopora_meandrina_HIv1___Sc0000007	11359313	11360084	772	2545	507	0.9194499017681729	+	UGGAUAUACGUACACAAUCUAGGCUAA	841	8	2450	17	7	16	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11760920-11761348	Cluster_2673	Pocillopora_meandrina_HIv1___Sc0000007	11760920	11761348	429	86	25	0.9883720930232558	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	33	1	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11764005-11764431	Cluster_2674	Pocillopora_meandrina_HIv1___Sc0000007	11764005	11764431	427	233	135	0.8669527896995708	+	UACUGAUAGUGAAACUGCUCCUUGAACC	17	3	216	4	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11764448-11764878	Cluster_2675	Pocillopora_meandrina_HIv1___Sc0000007	11764448	11764878	431	312	153	0.9647435897435898	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	16	1	299	1	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11769398-11769828	Cluster_2676	Pocillopora_meandrina_HIv1___Sc0000007	11769398	11769828	431	205	45	0.9951219512195122	+	UGUGUGACUUUGUAUGUAUAUUGAGCGU	34	1	203	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11931412-11931839	Cluster_2677	Pocillopora_meandrina_HIv1___Sc0000007	11931412	11931839	428	99	22	0.050505050505050504	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	4	91	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11943905-11944332	Cluster_2678	Pocillopora_meandrina_HIv1___Sc0000007	11943905	11944332	428	237	124	0.7637130801687764	.	UAGGGCUAACGAACACUGGUUGGACAGU	46	14	194	19	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12067431-12068032	Cluster_2679	Pocillopora_meandrina_HIv1___Sc0000007	12067431	12068032	602	620	182	0.0	-	UGAUGUUAUACUGUGAAAUCUCGUACCCGG	53	2	605	2	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12077062-12077489	Cluster_2680	Pocillopora_meandrina_HIv1___Sc0000007	12077062	12077489	428	238	57	1.0	+	UAUUACGGCUGUUGACUAUCCUUG	57	15	136	5	1	3	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12231846-12232275	Cluster_2681	Pocillopora_meandrina_HIv1___Sc0000007	12231846	12232275	430	280	39	0.7464285714285714	.	UACCAUAGAACUUUCCAGAACAUUUCAUC	93	2	267	0	0	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12251246-12251725	Cluster_2682	Pocillopora_meandrina_HIv1___Sc0000007	12251246	12251725	480	140420	3654	0.0016308218202535252	-	GUGGUCCGGACGGUCGAGGGUUAUCAAUCC	12670	6625	119924	2698	3287	3223	4663	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12436574-12437198	Cluster_2683	Pocillopora_meandrina_HIv1___Sc0000007	12436574	12437198	625	1013	283	0.2754195459032576	.	UUAUACUUUAGAAUCUGAAGAGUGCUCGUC	53	11	962	9	7	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12437496-12438544	Cluster_2684	Pocillopora_meandrina_HIv1___Sc0000007	12437496	12438544	1049	1665	437	0.3045045045045045	.	UGUAACUUUGAGCUUCUUUUUUGCAGGA	233	9	1579	0	8	37	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12450165-12450581	Cluster_2685	Pocillopora_meandrina_HIv1___Sc0000007	12450165	12450581	417	139	89	0.0	-	UCUUUCACUUCGAACUGAUUUUGACACGUC	9	1	133	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12465282-12465684	Cluster_2686	Pocillopora_meandrina_HIv1___Sc0000007	12465282	12465684	403	136	60	0.33088235294117646	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	29	8	110	3	0	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12492901-12493335	Cluster_2687	Pocillopora_meandrina_HIv1___Sc0000007	12492901	12493335	435	646	90	0.9613003095975232	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	301	2	632	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12497064-12497660	Cluster_2688	Pocillopora_meandrina_HIv1___Sc0000007	12497064	12497660	597	964	193	0.06016597510373444	-	UCUUAACUGUUAUCUUGGGCGCAGGAGC	179	3	946	0	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12497863-12498464	Cluster_2689	Pocillopora_meandrina_HIv1___Sc0000007	12497863	12498464	602	1292	290	0.28792569659442724	.	CACGAUCUCAUUGUGAAGAAGUUCAAAGA	241	8	1262	3	4	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12509623-12510050	Cluster_2690	Pocillopora_meandrina_HIv1___Sc0000007	12509623	12510050	428	157	55	0.07643312101910828	-	UGAACGCAGAACAGUAGGCCCGUUGGUGA	26	2	146	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12510339-12510869	Cluster_2691	Pocillopora_meandrina_HIv1___Sc0000007	12510339	12510869	531	552	135	0.1431159420289855	-	UGAAAACUUUGAACAGACUUUACCUGAAAA	129	2	542	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12517059-12517588	Cluster_2692	Pocillopora_meandrina_HIv1___Sc0000007	12517059	12517588	530	580	244	0.010344827586206896	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	29	7	555	3	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12517709-12518139	Cluster_2693	Pocillopora_meandrina_HIv1___Sc0000007	12517709	12518139	431	609	123	0.013136288998357963	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	122	2	602	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12521363-12521817	Cluster_2694	Pocillopora_meandrina_HIv1___Sc0000007	12521363	12521817	455	658	275	0.1838905775075988	-	UGAUUUCGGUAUUGAUCCAGGGAAGUG	36	7	587	9	7	9	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12522581-12523010	Cluster_2695	Pocillopora_meandrina_HIv1___Sc0000007	12522581	12523010	430	455	135	0.03296703296703297	-	UGUAGAAUCAAUCUGUUACUAAGACACC	104	1	439	4	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12538793-12539221	Cluster_2696	Pocillopora_meandrina_HIv1___Sc0000007	12538793	12539221	429	106	26	0.009433962264150943	-	UGAGUUCUACUGUAACGACUGAAUAGACU	41	0	100	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12539418-12539844	Cluster_2697	Pocillopora_meandrina_HIv1___Sc0000007	12539418	12539844	427	74	24	0.0	-	UGCGAAAUGGAUUAUUUACUCUCGGCGGGC	14	0	73	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12541488-12541918	Cluster_2698	Pocillopora_meandrina_HIv1___Sc0000007	12541488	12541918	431	510	89	0.00392156862745098	-	UUGGAAUUCGAAGCAAGUAGCAAUAGA	124	9	435	1	1	3	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12543826-12544865	Cluster_2699	Pocillopora_meandrina_HIv1___Sc0000007	12543826	12544865	1040	3999	806	0.0172543135783946	-	UAUUACACUGUGUCAAAUAGCGUGCCUGA	618	16	3900	18	12	22	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12544927-12545354	Cluster_2700	Pocillopora_meandrina_HIv1___Sc0000007	12544927	12545354	428	168	64	0.0	-	UAGGUGUAUCACUCAGAGUGGAAGAAUGUG	25	5	157	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12573621-12574763	Cluster_2701	Pocillopora_meandrina_HIv1___Sc0000007	12573621	12574763	1143	2130	425	0.07464788732394366	-	UAUGUGUAUUAUUCUUGUUGCUAACAUCA	462	15	1921	13	61	83	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12578994-12579419	Cluster_2702	Pocillopora_meandrina_HIv1___Sc0000007	12578994	12579419	426	88	26	0.0	-	UCUGGCAGCUCUUGCGAUUUCCUGUAAAG	36	1	83	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12585902-12586630	Cluster_2703	Pocillopora_meandrina_HIv1___Sc0000007	12585902	12586630	729	890	235	0.019101123595505618	-	UACAAACAACAGAAUGUUCGAACGGCUCGAC	104	13	856	5	4	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12590176-12590607	Cluster_2704	Pocillopora_meandrina_HIv1___Sc0000007	12590176	12590607	432	541	126	0.029574861367837338	-	UGAUAUACUGUGCAAGAGCCUGUAAA	170	4	508	2	3	22	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12591473-12591879	Cluster_2705	Pocillopora_meandrina_HIv1___Sc0000007	12591473	12591879	407	119	60	0.47058823529411764	.	GGAAAUAUCAAGUAAAGAUCGGCCGUCAUG	18	12	102	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12595830-12596316	Cluster_2706	Pocillopora_meandrina_HIv1___Sc0000007	12595830	12596316	487	4142	253	0.008208594881699663	-	UGGUUUGAUUGUCAGCAGUAGAUGAAAUG	1822	35	4014	13	7	11	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12596390-12598169	Cluster_2707	Pocillopora_meandrina_HIv1___Sc0000007	12596390	12598169	1780	17044	845	0.0010560901196902137	-	UCAUAAACUCAUUGAUCCUCUUAACAUG	6028	61	16763	20	15	95	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12598812-12601054	Cluster_2708	Pocillopora_meandrina_HIv1___Sc0000007	12598812	12601054	2243	7605	2184	0.08376068376068375	-	UAUGUACGAUUUUAACUGGAAGAAACGUU	356	185	7011	36	62	131	180	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12601338-12601763	Cluster_2709	Pocillopora_meandrina_HIv1___Sc0000007	12601338	12601763	426	126	64	0.007936507936507936	-	UUUAUACGGUCUUUUUUCUUUGGGAUUUGA	16	2	121	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12607904-12608336	Cluster_2710	Pocillopora_meandrina_HIv1___Sc0000007	12607904	12608336	433	188	73	0.0	-	UCUGCUAUCUGACGCUCUGAACACUGGUC	33	1	185	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12608474-12609228	Cluster_2711	Pocillopora_meandrina_HIv1___Sc0000007	12608474	12609228	755	6020	475	0.011461794019933556	-	UGAACGAUCUUCUCACCAUCUCUUCUGGAA	1453	10	5959	10	4	9	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12616793-12617385	Cluster_2712	Pocillopora_meandrina_HIv1___Sc0000007	12616793	12617385	593	1016	253	0.1279527559055118	-	UAUCUCUCCCUUGAAAGCUUAUUUGGGUU	168	12	955	9	2	7	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12617409-12617991	Cluster_2713	Pocillopora_meandrina_HIv1___Sc0000007	12617409	12617991	583	2527	366	0.036011080332409975	-	UAUCUCUCCCUUGAAAGCUUAUUUUGGUU	861	15	2399	11	19	33	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12619579-12620456	Cluster_2714	Pocillopora_meandrina_HIv1___Sc0000007	12619579	12620456	878	1195	384	0.005857740585774059	-	UCCGAUCUGGGGACCAAACCAUAACCUUUC	67	5	1168	7	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12624822-12625236	Cluster_2715	Pocillopora_meandrina_HIv1___Sc0000007	12624822	12625236	415	267	42	0.7415730337078652	.	CUUUCCGAGGUCGCA	198	199	66	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12625344-12626111	Cluster_2716	Pocillopora_meandrina_HIv1___Sc0000007	12625344	12626111	768	678	275	0.0	-	UCCUGAGAGCCUACAGGCAAAGAGAUUGUG	24	6	660	2	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12626251-12626661	Cluster_2717	Pocillopora_meandrina_HIv1___Sc0000007	12626251	12626661	411	180	73	0.0	-	UCUGUAAUGGCUUCUGAGUUGCAACUAGC	18	3	170	0	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12627062-12627490	Cluster_2718	Pocillopora_meandrina_HIv1___Sc0000007	12627062	12627490	429	300	102	0.0	-	UUCGAUCACAUCAGGAGAACUUCCAAGGC	39	5	290	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12627799-12628228	Cluster_2719	Pocillopora_meandrina_HIv1___Sc0000007	12627799	12628228	430	357	71	0.0	-	UAAUCUAAAUCAGGCUCCGGAAGUCCAAUU	173	2	353	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12631368-12631796	Cluster_2720	Pocillopora_meandrina_HIv1___Sc0000007	12631368	12631796	429	156	68	0.0	-	UCUUCCAUAUGUUGGCAACUGUUGUAGUC	28	2	154	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12639707-12640228	Cluster_2721	Pocillopora_meandrina_HIv1___Sc0000007	12639707	12640228	522	3794	370	0.0	-	UCAGUAACUGACCCAGGAUCUUGCUCUUC	1100	14	3707	16	10	7	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12642478-12642981	Cluster_2722	Pocillopora_meandrina_HIv1___Sc0000007	12642478	12642981	504	270	122	0.0	-	UGAUUUGUACGUACAGGGCUUGAUCACGUG	29	11	249	2	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12647061-12647489	Cluster_2723	Pocillopora_meandrina_HIv1___Sc0000007	12647061	12647489	429	245	54	0.0	-	UUCCUGUAACACUUUCACAGAUGCUGACA	105	31	202	0	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12648700-12649127	Cluster_2724	Pocillopora_meandrina_HIv1___Sc0000007	12648700	12649127	428	137	26	0.0072992700729927005	-	UGGUUUCUGGAACUGGAGAUCAAGGAGU	81	5	131	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12699562-12699991	Cluster_2725	Pocillopora_meandrina_HIv1___Sc0000007	12699562	12699991	430	311	30	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	133	1	286	0	4	13	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12839526-12839943	Cluster_2726	Pocillopora_meandrina_HIv1___Sc0000007	12839526	12839943	418	191	52	0.005235602094240838	-	CCGUGUUGUAGGCUU	64	151	20	2	6	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12853897-12855168	Cluster_2727	Pocillopora_meandrina_HIv1___Sc0000007	12853897	12855168	1272	1259	503	0.07942811755361398	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	86	11	1186	7	5	16	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12855655-12856465	Cluster_2728	Pocillopora_meandrina_HIv1___Sc0000007	12855655	12856465	811	1148	338	0.08362369337979095	-	UGAAAAUCACUCUGUCCACAUUGAAU	171	20	1045	8	13	34	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12856549-12857028	Cluster_2729	Pocillopora_meandrina_HIv1___Sc0000007	12856549	12857028	480	303	122	0.10231023102310231	-	UCCAAUCACACACAGUUCUCCUGCGGC	65	2	284	1	0	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12857328-12858411	Cluster_2730	Pocillopora_meandrina_HIv1___Sc0000007	12857328	12858411	1084	2592	721	0.09104938271604938	-	UGUUACCGGUCUUGCUAACCACUUGGA	190	29	2367	15	30	40	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12867093-12867895	Cluster_2731	Pocillopora_meandrina_HIv1___Sc0000007	12867093	12867895	803	1329	340	0.2746425884123401	.	UCAACCAUGAGAACAGAAAACAGAAGCA	98	10	1268	1	12	6	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12899034-12899568	Cluster_2732	Pocillopora_meandrina_HIv1___Sc0000007	12899034	12899568	535	1395	351	0.08315412186379928	-	UACGUUCCAAUUUUCUAGUAUCACUCGC	181	37	1260	4	9	54	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12940130-12942179	Cluster_2733	Pocillopora_meandrina_HIv1___Sc0000007	12940130	12942179	2050	12465	1693	0.09755314881668672	-	UAUAGAUGUAGCUCUUGGUAUGUGCCA	1989	48	11561	30	84	277	465	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12943888-12944684	Cluster_2734	Pocillopora_meandrina_HIv1___Sc0000007	12943888	12944684	797	3097	579	0.8052954472069745	+	AUUUCUUUCAAUUUGGACUCAGCGAUGGA	319	37	2776	24	38	54	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12945055-12945484	Cluster_2735	Pocillopora_meandrina_HIv1___Sc0000007	12945055	12945484	430	254	51	0.9960629921259843	+	UCCGAAUACACGUGGAAAGGAUAAUUGGGC	181	0	251	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12945924-12946595	Cluster_2736	Pocillopora_meandrina_HIv1___Sc0000007	12945924	12946595	672	914	204	0.9978118161925602	+	UGCACUGGAAUACAACGAAUUCCCUGAAAGG	136	12	890	4	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12947360-12947787	Cluster_2737	Pocillopora_meandrina_HIv1___Sc0000007	12947360	12947787	428	4207	185	0.021868314713572617	-	UGUUACUGUAGAUGGGGUUUCCCUAGC	1248	5	3618	3	32	7	542	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12948352-12949360	Cluster_2738	Pocillopora_meandrina_HIv1___Sc0000007	12948352	12949360	1009	4419	751	0.8553971486761711	+	UGAUUGUACGCUUCCAGACUGCGAAAGG	885	20	4177	16	16	73	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12960835-12961264	Cluster_2739	Pocillopora_meandrina_HIv1___Sc0000007	12960835	12961264	430	465	45	0.002150537634408602	-	UUGAAGACUUUGUGGAUGAAAAGCUAUG	163	2	459	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12962412-12962949	Cluster_2740	Pocillopora_meandrina_HIv1___Sc0000007	12962412	12962949	538	603	164	0.0	-	UGUAGAAAUCGCUUCAAGCUUACGGCUUAGA	57	7	584	0	8	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12980047-12980657	Cluster_2741	Pocillopora_meandrina_HIv1___Sc0000007	12980047	12980657	611	373	132	0.6353887399463807	.	AAGUAAAAAAGUGCGACUGAAGC	42	14	166	11	13	101	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12981420-12982492	Cluster_2742	Pocillopora_meandrina_HIv1___Sc0000007	12981420	12982492	1073	4033	498	0.9117282420034714	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGCG	663	71	3588	8	27	116	223	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12987565-12989325	Cluster_2743	Pocillopora_meandrina_HIv1___Sc0000007	12987565	12989325	1761	23620	2346	0.027222692633361557	-	UUUUUCGAACAGAUCUUCUGGCCAAAGA	1921	134	22253	104	133	286	710	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12990601-12991442	Cluster_2744	Pocillopora_meandrina_HIv1___Sc0000007	12990601	12991442	842	24414	939	0.005324813631522897	-	UCGGUGUUAUGAUUGUUGAAACAGUCCA	15284	83	23828	77	195	163	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12991489-12991909	Cluster_2745	Pocillopora_meandrina_HIv1___Sc0000007	12991489	12991909	421	94	35	0.010638297872340425	-	UAUAACGAUUUUGACUCCCACUUGGACCA	26	0	92	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12993684-12994114	Cluster_2746	Pocillopora_meandrina_HIv1___Sc0000007	12993684	12994114	431	676	197	0.6553254437869822	.	UUUACGAUCAUCUGACACCUCGUC	114	7	449	1	5	57	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13000411-13000840	Cluster_2747	Pocillopora_meandrina_HIv1___Sc0000007	13000411	13000840	430	240	96	0.03333333333333333	-	UGAAAGGAGAUUUAGUAGACUGAAGGAAC	39	1	223	0	5	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13000983-13001963	Cluster_2748	Pocillopora_meandrina_HIv1___Sc0000007	13000983	13001963	981	5093	665	0.0033379147849990185	-	CCCUUCACUCCAGAAUGUAGGACCUCUUU	276	45	4919	23	27	26	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13011617-13012043	Cluster_2749	Pocillopora_meandrina_HIv1___Sc0000007	13011617	13012043	427	143	41	0.0	-	UGAGAUUCAAAGGCUUGGGUAGACUUG	25	1	141	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13012625-13013305	Cluster_2750	Pocillopora_meandrina_HIv1___Sc0000007	13012625	13013305	681	776	218	0.030927835051546393	-	UGAUAUACUGUGCAAGAGCCUGUAAA	129	9	729	3	4	27	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13013702-13014122	Cluster_2751	Pocillopora_meandrina_HIv1___Sc0000007	13013702	13014122	421	140	50	0.7928571428571428	.	AACGUAGCGAACUCGACAAGUAGC	31	6	31	48	1	12	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13014797-13015223	Cluster_2752	Pocillopora_meandrina_HIv1___Sc0000007	13014797	13015223	427	218	120	0.10550458715596331	-	UAUCAAGUGUUCCAGGAUUCUGUCGUC	13	0	202	1	2	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13020809-13021328	Cluster_2753	Pocillopora_meandrina_HIv1___Sc0000007	13020809	13021328	520	890	269	0.18764044943820224	-	UGAUAUGACCUUCGGCAAAAAACUGGA	96	6	796	4	3	18	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13021334-13022809	Cluster_2754	Pocillopora_meandrina_HIv1___Sc0000007	13021334	13022809	1476	1852	730	0.22192224622030238	.	UGUAACUGGUUCACUGCGAUUUUGUAGU	102	17	1611	12	12	71	129	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13024372-13025542	Cluster_2755	Pocillopora_meandrina_HIv1___Sc0000007	13024372	13025542	1171	2218	692	0.7159603246167718	.	UGCUUGUAGUUGGACCAUGUCUGUGACA	86	65	1989	10	21	21	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13025838-13026267	Cluster_2756	Pocillopora_meandrina_HIv1___Sc0000007	13025838	13026267	430	320	143	0.89375	+	UGAAGUAACUACGAACCCAUCUCGACCGU	24	4	298	1	8	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13026728-13027153	Cluster_2757	Pocillopora_meandrina_HIv1___Sc0000007	13026728	13027153	426	164	74	0.21951219512195122	.	UAUUUCCGUUCAUUUAAAUAGCUGUUU	18	21	135	0	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13031527-13032125	Cluster_2758	Pocillopora_meandrina_HIv1___Sc0000007	13031527	13032125	599	302	190	0.19205298013245034	-	UGGAAAUACUUAAAGGAGAUAAGACGUU	14	3	258	8	9	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13032732-13033420	Cluster_2759	Pocillopora_meandrina_HIv1___Sc0000007	13032732	13033420	689	1075	362	0.15069767441860465	-	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	120	15	1003	3	4	25	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13039656-13040080	Cluster_2760	Pocillopora_meandrina_HIv1___Sc0000007	13039656	13040080	425	120	53	0.8416666666666667	+	AGAGAUGAUAAGGGACCAGAUCGUUGAA	18	19	87	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13041080-13041503	Cluster_2761	Pocillopora_meandrina_HIv1___Sc0000007	13041080	13041503	424	245	119	0.16326530612244897	-	UGUUCGCGUAAUUCGGUAUGAAUUUGG	19	3	227	1	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13050160-13050588	Cluster_2762	Pocillopora_meandrina_HIv1___Sc0000007	13050160	13050588	429	116	36	0.0	-	UGAUAAUAUCGGACUGUCUCCUGUUGAGA	56	0	113	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13057558-13058799	Cluster_2763	Pocillopora_meandrina_HIv1___Sc0000007	13057558	13058799	1242	11097	1371	0.01973506353068397	-	UCUGACUGACUAACAGGAUAUCUGCUUC	775	36	10794	24	43	69	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13069084-13069502	Cluster_2764	Pocillopora_meandrina_HIv1___Sc0000007	13069084	13069502	419	110	46	0.0	-	AGGACUACCAACAUCUUCUUUUCCCGGU	25	0	106	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13070719-13071146	Cluster_2765	Pocillopora_meandrina_HIv1___Sc0000007	13070719	13071146	428	386	116	0.0	-	UGGAUUGUCUUCAGUUGGGACGUGAUGC	143	2	382	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13071485-13071897	Cluster_2766	Pocillopora_meandrina_HIv1___Sc0000007	13071485	13071897	413	170	100	0.0	-	UGUGUAGCGUAUUGGUCCUGCGAAGUCA	10	0	165	1	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13084808-13085224	Cluster_2767	Pocillopora_meandrina_HIv1___Sc0000007	13084808	13085224	417	222	117	0.02252252252252252	-	UGAUACUGCAACUUCAUUUCUCUGGAAGA	16	1	210	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13086409-13086835	Cluster_2768	Pocillopora_meandrina_HIv1___Sc0000007	13086409	13086835	427	196	85	0.015306122448979591	-	UGUGAAGUGCUAACAAUGAUCUGAAGUGC	49	11	176	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13087126-13087891	Cluster_2769	Pocillopora_meandrina_HIv1___Sc0000007	13087126	13087891	766	281	103	0.0035587188612099642	-	UGAUCUUUUUUGUUAGGACCUUCCUACUCUU	69	4	276	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13095271-13095699	Cluster_2770	Pocillopora_meandrina_HIv1___Sc0000007	13095271	13095699	429	276	158	0.14855072463768115	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	25	5	248	1	2	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13096929-13097630	Cluster_2771	Pocillopora_meandrina_HIv1___Sc0000007	13096929	13097630	702	276	149	0.08333333333333333	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	30	3	262	1	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13100218-13100648	Cluster_2772	Pocillopora_meandrina_HIv1___Sc0000007	13100218	13100648	431	163	61	0.0	-	UGCACAGACUGACUUUGAAACAUCAAAUAUC	52	1	155	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13443366-13443767	Cluster_2773	Pocillopora_meandrina_HIv1___Sc0000007	13443366	13443767	402	229	172	0.0	-	AAAUAGUGAAUGGAUUUUUGUAGACU	4	41	139	14	8	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13555573-13556003	Cluster_2774	Pocillopora_meandrina_HIv1___Sc0000007	13555573	13556003	431	142	9	0.007042253521126761	-	UGAGUAAACCUUCUUUUAAAUUUGAACAUUU	70	0	142	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:145548-146144	Cluster_2775	Pocillopora_meandrina_HIv1___Sc0000008	145548	146144	597	5576	498	0.002510760401721664	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	845	9	5518	6	5	8	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:234988-235415	Cluster_2776	Pocillopora_meandrina_HIv1___Sc0000008	234988	235415	428	132	34	0.007575757575757576	-	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	32	1	131	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:636585-637181	Cluster_2777	Pocillopora_meandrina_HIv1___Sc0000008	636585	637181	597	5716	506	0.003848845346396081	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	858	9	5647	6	4	15	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:806592-807009	Cluster_2778	Pocillopora_meandrina_HIv1___Sc0000008	806592	807009	418	139	5	0.014388489208633094	-	AAGGUGAACAAAGCGAUA	103	138	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:930857-931349	Cluster_2779	Pocillopora_meandrina_HIv1___Sc0000008	930857	931349	493	222	110	0.7072072072072072	.	UCCGAGUGGCUUUUUUAACUCCUGUAAUA	32	6	176	0	7	13	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:960182-960609	Cluster_2780	Pocillopora_meandrina_HIv1___Sc0000008	960182	960609	428	177	28	0.9943502824858758	+	UAUUAUUCAUCUGCUGUCUUUUUGCCUC	74	2	173	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1007000-1007429	Cluster_2781	Pocillopora_meandrina_HIv1___Sc0000008	1007000	1007429	430	170	47	0.03529411764705882	-	UAAUGUGUGACUUUUUCGCUUUUGUUUUGA	67	0	169	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1058500-1058927	Cluster_2782	Pocillopora_meandrina_HIv1___Sc0000008	1058500	1058927	428	178	55	0.0449438202247191	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	0	172	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1311747-1312175	Cluster_2783	Pocillopora_meandrina_HIv1___Sc0000008	1311747	1312175	429	172	36	0.01744186046511628	-	AAGAUGUCGAGCGUUUUCCGAACGGAUUG	55	2	153	1	0	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1344713-1345141	Cluster_2784	Pocillopora_meandrina_HIv1___Sc0000008	1344713	1345141	429	146	34	0.0410958904109589	-	UUAUGAGUGAACCUUUCAUCGAGAAACAUG	53	4	141	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1506278-1506707	Cluster_2785	Pocillopora_meandrina_HIv1___Sc0000008	1506278	1506707	430	237	48	0.004219409282700422	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	81	0	237	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1603033-1603626	Cluster_2786	Pocillopora_meandrina_HIv1___Sc0000008	1603033	1603626	594	431	299	0.9837587006960556	+	UCACGCCGGCAUGGAUGAACC	9	137	145	50	32	38	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1604006-1604500	Cluster_2787	Pocillopora_meandrina_HIv1___Sc0000008	1604006	1604500	495	454	325	1.0	+	CAUGAUGUGAUUUCGGGACCGACU	8	86	224	28	39	30	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1604636-1605096	Cluster_2788	Pocillopora_meandrina_HIv1___Sc0000008	1604636	1605096	461	474	320	1.0	+	CUGAUGAACUGACACGCCACAUGC	9	126	182	64	37	19	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1605572-1606131	Cluster_2789	Pocillopora_meandrina_HIv1___Sc0000008	1605572	1606131	560	489	265	0.9959100204498977	+	GAUGUUGACUGUUUAUCAAGGA	17	65	279	25	40	37	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1783802-1783891	Cluster_2790	Pocillopora_meandrina_HIv1___Sc0000008	1783802	1783891	90	1049	80	1.0	+	UAUGUUUUGGCUUGUUCCCA	330	912	11	105	14	5	2	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:1803785-1804208	Cluster_2791	Pocillopora_meandrina_HIv1___Sc0000008	1803785	1804208	424	18424	223	0.9996200607902735	+	CAAUGUUUCGGCUUGUUCCCG	9003	2317	12	15336	346	401	12	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1917222-1917651	Cluster_2792	Pocillopora_meandrina_HIv1___Sc0000008	1917222	1917651	430	173	42	0.0	-	UGCAACAUGCUUUUUCAUCGUGCUGGACUG	59	1	170	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1921314-1922472	Cluster_2793	Pocillopora_meandrina_HIv1___Sc0000008	1921314	1922472	1159	1244	391	0.02009646302250804	-	UGGUCACGUCAUACUUCUGAAUCUUCAAC	245	8	1205	4	3	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1929792-1930221	Cluster_2794	Pocillopora_meandrina_HIv1___Sc0000008	1929792	1930221	430	330	94	0.06060606060606061	-	UGAACAAGUGAGCAAGAUGAUCUUCAUGAA	124	0	321	0	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1931349-1931776	Cluster_2795	Pocillopora_meandrina_HIv1___Sc0000008	1931349	1931776	428	148	42	0.006756756756756757	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	28	0	145	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1933348-1934418	Cluster_2796	Pocillopora_meandrina_HIv1___Sc0000008	1933348	1934418	1071	3794	753	0.32762256193990513	.	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	319	30	3607	29	18	61	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1940796-1941225	Cluster_2797	Pocillopora_meandrina_HIv1___Sc0000008	1940796	1941225	430	87	18	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	0	86	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1947796-1948211	Cluster_2798	Pocillopora_meandrina_HIv1___Sc0000008	1947796	1948211	416	125	56	0.0	-	UGUGACUCUGGCUUGUAGAGAGAUUCUGG	13	1	123	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1982268-1982695	Cluster_2799	Pocillopora_meandrina_HIv1___Sc0000008	1982268	1982695	428	127	54	0.015748031496062992	-	UUGGAAGAUUUUGUAGACACAACUGACA	43	0	118	2	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1986496-1986975	Cluster_2800	Pocillopora_meandrina_HIv1___Sc0000008	1986496	1986975	480	5462	288	0.8218601244965215	+	UAUGUUCAGGUUGGGCGAGAUGGAUUCGUC	1272	15	5358	16	14	24	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1988271-1990998	Cluster_2801	Pocillopora_meandrina_HIv1___Sc0000008	1988271	1990998	2728	10271	2081	0.007594197254405608	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1291	34	10036	13	45	44	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2002298-2002723	Cluster_2802	Pocillopora_meandrina_HIv1___Sc0000008	2002298	2002723	426	186	59	0.0	-	UGCUCUGAUUGUCUGGCCUUGACCCAGUU	29	0	182	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2004591-2005854	Cluster_2803	Pocillopora_meandrina_HIv1___Sc0000008	2004591	2005854	1264	10693	953	0.06041335453100159	-	UAUUGACAAUGAAUUCGAGACUGACAGUG	2470	72	10114	27	141	86	253	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2007397-2007827	Cluster_2804	Pocillopora_meandrina_HIv1___Sc0000008	2007397	2007827	431	6497	323	0.00015391719255040788	-	UUUGUCACCUCCUUGACUGCUCCUUGAC	1655	7	6391	8	9	5	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2012234-2013269	Cluster_2805	Pocillopora_meandrina_HIv1___Sc0000008	2012234	2013269	1036	3053	545	0.00982640026203734	-	UAUGUCAACUGCUGUCCCUUCUUUUAAAU	897	41	2875	15	25	40	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2013407-2013886	Cluster_2806	Pocillopora_meandrina_HIv1___Sc0000008	2013407	2013886	480	4892	281	0.009607522485690924	-	UUGUCUACAAGAAGCCUGUCCAUUUUGU	3652	221	4631	7	12	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2013935-2014362	Cluster_2807	Pocillopora_meandrina_HIv1___Sc0000008	2013935	2014362	428	396	55	0.0	-	UAGUCCUAAUCAGUCAUUAAAUUUGGUU	197	0	391	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2018903-2019789	Cluster_2808	Pocillopora_meandrina_HIv1___Sc0000008	2018903	2019789	887	42485	1293	0.0028716017417912206	-	UUUCCGUUGCAUUUGAAGACUUCUUGUUAGA	15780	109	41803	146	104	86	237	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2019808-2021489	Cluster_2809	Pocillopora_meandrina_HIv1___Sc0000008	2019808	2021489	1682	2106	805	0.1866096866096866	-	UCUAACGCGUUUGUCUGACAUCCCUUU	167	41	1885	18	41	26	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2022214-2022636	Cluster_2810	Pocillopora_meandrina_HIv1___Sc0000008	2022214	2022636	423	162	77	0.06172839506172839	-	UGACGUCACGAUCUUUGCGCGCUACCAU	18	4	151	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2030130-2031953	Cluster_2811	Pocillopora_meandrina_HIv1___Sc0000008	2030130	2031953	1824	27096	2928	0.06465899025686449	-	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2223	224	25646	87	142	389	608	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2032341-2036410	Cluster_2812	Pocillopora_meandrina_HIv1___Sc0000008	2032341	2036410	4070	93249	4385	0.18413066091861574	-	CACCAAGGUCUUGUAGUCCAGUACAACU	27356	499	90012	256	312	396	1774	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2038208-2038801	Cluster_2813	Pocillopora_meandrina_HIv1___Sc0000008	2038208	2038801	594	535	136	0.009345794392523364	-	UCAACAGCCUGAACUUGUCUUCACAAGACU	133	7	520	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2046339-2046752	Cluster_2814	Pocillopora_meandrina_HIv1___Sc0000008	2046339	2046752	414	121	58	0.0	-	UAAUCUGUCUGUUUCUCGGUCGAAGAAUC	35	2	117	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2047849-2048276	Cluster_2815	Pocillopora_meandrina_HIv1___Sc0000008	2047849	2048276	428	224	119	0.07142857142857142	-	UGUGUGCCUUUCUGAGCUGUCUGAUUUC	16	13	201	2	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2098378-2098857	Cluster_2816	Pocillopora_meandrina_HIv1___Sc0000008	2098378	2098857	480	11803	847	0.0001694484453105143	-	UACAAACAAGUUAAAAUUCUGAGCAGG	796	3000	5981	709	308	748	1057	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2099154-2099629	Cluster_2817	Pocillopora_meandrina_HIv1___Sc0000008	2099154	2099629	476	13567	605	0.0	-	CUGCGAUGAUGACUUAACUUAGGACA	4220	3254	7404	925	386	566	1032	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2104385-2104865	Cluster_2818	Pocillopora_meandrina_HIv1___Sc0000008	2104385	2104865	481	1445	293	0.0	-	UGUGGUGAUGACUUAACUUAGGACA	268	334	704	73	89	114	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2226362-2226785	Cluster_2819	Pocillopora_meandrina_HIv1___Sc0000008	2226362	2226785	424	203	127	0.9901477832512315	+	GACGAUGAUUGUCACUACGUGGUU	31	34	65	14	22	14	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2226881-2227302	Cluster_2820	Pocillopora_meandrina_HIv1___Sc0000008	2226881	2227302	422	234	153	1.0	+	AUUCGAUCAGAGAUGGACA	12	66	58	29	48	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2242788-2244155	Cluster_2821	Pocillopora_meandrina_HIv1___Sc0000008	2242788	2244155	1368	4237	975	0.1951852725985367	-	UGCUGCAUGUCUACUUGUCGAAGUCCUGGC	257	66	3495	38	35	161	442	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2244212-2244632	Cluster_2822	Pocillopora_meandrina_HIv1___Sc0000008	2244212	2244632	421	130	71	0.25384615384615383	.	UAGAAUCUCUUCACCUAUAUGCAUCAU	17	2	121	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2257518-2258066	Cluster_2823	Pocillopora_meandrina_HIv1___Sc0000008	2257518	2258066	549	324	150	0.6604938271604939	.	UGACUUUAUUUGCGUCACGGAUUAGCUGGC	24	6	248	4	11	29	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2517345-2517765	Cluster_2824	Pocillopora_meandrina_HIv1___Sc0000008	2517345	2517765	421	112	52	0.0	-	AGUGGUGAUGAAAUUUUUGGU	9	21	40	14	19	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2593578-2594011	Cluster_2825	Pocillopora_meandrina_HIv1___Sc0000008	2593578	2594011	434	1052	199	0.06463878326996197	-	UGUUUCAACUCUUGAAUGAUUCUUGCUU	150	2	1021	7	1	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2703702-2704150	Cluster_2826	Pocillopora_meandrina_HIv1___Sc0000008	2703702	2704150	449	1060	153	0.22924528301886793	.	UAGGAUAUAUCACUUGCGUAAUUUACA	204	23	997	3	15	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2818399-2818824	Cluster_2827	Pocillopora_meandrina_HIv1___Sc0000008	2818399	2818824	426	121	33	0.9917355371900827	+	AACUACUGCUCGUACUCUAGAUGACAAUCA	22	0	121	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3044995-3045591	Cluster_2828	Pocillopora_meandrina_HIv1___Sc0000008	3044995	3045591	597	5568	474	0.003232758620689655	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	850	6	5510	6	8	10	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3152144-3152608	Cluster_2829	Pocillopora_meandrina_HIv1___Sc0000008	3152144	3152608	465	506	179	0.005928853754940711	-	UACAAAGCUCUCACGAAUUCACAAACAGA	51	1	502	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3153032-3154167	Cluster_2830	Pocillopora_meandrina_HIv1___Sc0000008	3153032	3154167	1136	1411	560	0.012756909992912827	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	104	15	1358	4	7	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3154288-3155166	Cluster_2831	Pocillopora_meandrina_HIv1___Sc0000008	3154288	3155166	879	904	402	0.011061946902654867	-	UGCUGAAACGAUUUUGACAGGUUGUCA	61	4	865	4	4	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3155589-3156025	Cluster_2832	Pocillopora_meandrina_HIv1___Sc0000008	3155589	3156025	437	831	262	0.0036101083032490976	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	109	7	818	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3489845-3490273	Cluster_2833	Pocillopora_meandrina_HIv1___Sc0000008	3489845	3490273	429	152	43	1.0	+	UCCGAUUCAGACUCCGAACUUGAUUUUGA	41	5	140	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3576420-3576514	Cluster_2834	Pocillopora_meandrina_HIv1___Sc0000008	3576420	3576514	95	301	45	1.0	+	CGAUGGAACACACAAGUAGAGA	89	31	9	14	185	60	2	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:3603048-3603467	Cluster_2835	Pocillopora_meandrina_HIv1___Sc0000008	3603048	3603467	420	257	6	0.0	-	UAUGUUGCUCGGGUUUUUGA	252	254	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3619341-3619435	Cluster_2836	Pocillopora_meandrina_HIv1___Sc0000008	3619341	3619435	95	366	65	0.00546448087431694	-	UGUGCUUUGGUUCAAAAAUGUC	148	65	6	15	212	56	12	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:3682573-3683023	Cluster_2837	Pocillopora_meandrina_HIv1___Sc0000008	3682573	3683023	451	626	80	1.0	+	UCUUGGAGUGUAUCUACAUGAGU	108	65	131	107	137	180	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3792737-3793149	Cluster_2838	Pocillopora_meandrina_HIv1___Sc0000008	3792737	3793149	413	348	253	0.005747126436781609	-	UCAAAGACUGAGGCCAGCAAGACUGAAGA	11	73	152	24	34	41	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3806432-3807174	Cluster_2839	Pocillopora_meandrina_HIv1___Sc0000008	3806432	3807174	743	822	359	0.006082725060827251	-	CAAACAAUUGCUGGCUGAUGGCU	44	178	285	96	71	119	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3945940-3946359	Cluster_2840	Pocillopora_meandrina_HIv1___Sc0000008	3945940	3946359	420	201	108	1.0	+	UGUCAUAACGCUCUGUCCGAUCGCUGUA	10	1	194	3	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3947424-3948032	Cluster_2841	Pocillopora_meandrina_HIv1___Sc0000008	3947424	3948032	609	468	157	0.9893162393162394	+	UCUGACCCGUCACUGAAUAUGAUAAGAGU	100	1	454	0	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3948492-3949248	Cluster_2842	Pocillopora_meandrina_HIv1___Sc0000008	3948492	3949248	757	505	247	0.9841584158415841	+	UGAUUUUGAUAAACUCUGCUAUGUUCGGGA	38	5	486	2	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3949623-3950048	Cluster_2843	Pocillopora_meandrina_HIv1___Sc0000008	3949623	3950048	426	221	127	0.995475113122172	+	UGUCGUGUCUUUCAUCCGCUGUGGCGUA	11	2	206	0	6	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3950885-3951344	Cluster_2844	Pocillopora_meandrina_HIv1___Sc0000008	3950885	3951344	460	757	204	0.17437252311756934	-	UAAACAACAGAAAGUCCUUUGAAACGUG	246	5	741	3	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3961410-3963407	Cluster_2845	Pocillopora_meandrina_HIv1___Sc0000008	3961410	3963407	1998	4139	1390	0.09495047112829186	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	359	28	3883	28	33	47	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3963414-3963841	Cluster_2846	Pocillopora_meandrina_HIv1___Sc0000008	3963414	3963841	428	370	169	0.14864864864864866	-	UUGUCGUGAUCUUUCACUGCUUCUUGC	69	1	344	3	1	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3963959-3964385	Cluster_2847	Pocillopora_meandrina_HIv1___Sc0000008	3963959	3964385	427	164	74	0.036585365853658534	-	UGAACUUCUCGGCUCCAAACACUAUGG	50	4	153	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3964401-3964832	Cluster_2848	Pocillopora_meandrina_HIv1___Sc0000008	3964401	3964832	432	478	167	0.03765690376569038	-	UAAUUCCAUCUUGCGCUGAUAGCUCGU	59	4	454	6	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3965118-3966291	Cluster_2849	Pocillopora_meandrina_HIv1___Sc0000008	3965118	3966291	1174	959	378	0.056308654848800835	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	141	18	883	0	13	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3980226-3980655	Cluster_2850	Pocillopora_meandrina_HIv1___Sc0000008	3980226	3980655	430	1718	178	0.006984866123399301	-	GGUUUCGUAGUGUAGUGG	407	1160	507	9	10	28	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4396995-4397415	Cluster_2851	Pocillopora_meandrina_HIv1___Sc0000008	4396995	4397415	421	121	26	0.01652892561983471	-	CGUAGAAUGACUGUUACCA	28	44	25	17	2	7	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4433244-4433661	Cluster_2852	Pocillopora_meandrina_HIv1___Sc0000008	4433244	4433661	418	90	9	1.0	+	AACUGUCUGAGUGUCUAU	63	85	3	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4541060-4541481	Cluster_2853	Pocillopora_meandrina_HIv1___Sc0000008	4541060	4541481	422	156	99	1.0	+	AGGGCAAGAACUGUCGAAGACA	14	19	64	6	23	28	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4701279-4701707	Cluster_2854	Pocillopora_meandrina_HIv1___Sc0000008	4701279	4701707	429	140	20	0.9642857142857143	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	55	3	136	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4946465-4946893	Cluster_2855	Pocillopora_meandrina_HIv1___Sc0000008	4946465	4946893	429	239	21	0.9916317991631799	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	101	0	234	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5387738-5387830	Cluster_2856	Pocillopora_meandrina_HIv1___Sc0000008	5387738	5387830	93	1515	131	0.0019801980198019802	-	AACUUUUCUACAAUUCCAGUGGA	274	246	37	131	391	660	50	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:5481836-5482255	Cluster_2857	Pocillopora_meandrina_HIv1___Sc0000008	5481836	5482255	420	469	27	1.0	+	CUUGAAGCGGUUGGAUCA	249	463	6	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5492891-5493311	Cluster_2858	Pocillopora_meandrina_HIv1___Sc0000008	5492891	5493311	421	227	13	1.0	+	CGGCUUGAAAAAAAAAAAAA	56	147	0	51	28	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5816867-5817285	Cluster_2859	Pocillopora_meandrina_HIv1___Sc0000008	5816867	5817285	419	87	5	1.0	+	CCGGGGGAGACGAUGAUUC	82	86	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6100492-6100916	Cluster_2860	Pocillopora_meandrina_HIv1___Sc0000008	6100492	6100916	425	423	68	0.9976359338061466	+	UGGAAAGUGCGUACGAACGAUUU	119	22	4	10	195	160	32	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6124721-6125148	Cluster_2861	Pocillopora_meandrina_HIv1___Sc0000008	6124721	6125148	428	399	49	0.010025062656641603	-	UGAAAAGAACAAUGAUGUAGCUCGUGCA	297	7	384	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6125278-6125771	Cluster_2862	Pocillopora_meandrina_HIv1___Sc0000008	6125278	6125771	494	187	46	0.026737967914438502	-	UGAGAGUUACCACACAAUAAAAGAGUCAUU	38	4	180	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6307431-6308672	Cluster_2863	Pocillopora_meandrina_HIv1___Sc0000008	6307431	6308672	1242	11189	1457	0.0273482884976316	-	UCUGACUGACUAACAGGAUAUCUGCUUC	677	42	10850	25	32	83	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6310917-6311346	Cluster_2864	Pocillopora_meandrina_HIv1___Sc0000008	6310917	6311346	430	273	149	0.16483516483516483	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	25	2	248	1	2	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6312576-6313279	Cluster_2865	Pocillopora_meandrina_HIv1___Sc0000008	6312576	6313279	704	292	154	0.04794520547945205	-	UGAUGUGAUUUCCUGUUUGACUUGGUU	22	3	281	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6516003-6516408	Cluster_2866	Pocillopora_meandrina_HIv1___Sc0000008	6516003	6516408	406	172	132	0.0	-	CGAAUGAUGAACAAUGAACGCUUC	4	35	72	15	15	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6516959-6517380	Cluster_2867	Pocillopora_meandrina_HIv1___Sc0000008	6516959	6517380	422	262	181	0.0	-	AGAAAAACGCUGCGGAUGU	7	103	87	21	15	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6523070-6523803	Cluster_2868	Pocillopora_meandrina_HIv1___Sc0000008	6523070	6523803	734	765	531	0.00130718954248366	-	GAACGAUCAAGACUCGUCUGGGGAA	11	196	293	86	59	71	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6783256-6783685	Cluster_2869	Pocillopora_meandrina_HIv1___Sc0000008	6783256	6783685	430	228	24	0.0	-	AUGGCAAAAACACAUCUUACAUUGGCUGUA	185	2	224	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6870035-6870463	Cluster_2870	Pocillopora_meandrina_HIv1___Sc0000008	6870035	6870463	429	228	45	1.0	+	AAGUGUGAUCUUUCUCUUAUGUGGCUUUG	137	1	218	3	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6906017-6906501	Cluster_2871	Pocillopora_meandrina_HIv1___Sc0000008	6906017	6906501	485	2056	318	0.6906614785992218	.	UCAGAUCGUAUUUCCUCAGUGUACCAUA	277	2	1993	4	8	7	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6913071-6913566	Cluster_2872	Pocillopora_meandrina_HIv1___Sc0000008	6913071	6913566	496	1093	72	0.9762122598353157	+	UCACACCAAUGUCUUCAUCUGUUAGAGA	753	13	1058	4	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6918900-6919327	Cluster_2873	Pocillopora_meandrina_HIv1___Sc0000008	6918900	6919327	428	87	15	0.022988505747126436	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	32	0	85	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7168458-7168875	Cluster_2874	Pocillopora_meandrina_HIv1___Sc0000008	7168458	7168875	418	128	43	0.9765625	+	GCUGCGAUGGCCGAGUGG	38	104	7	6	7	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7228614-7229034	Cluster_2875	Pocillopora_meandrina_HIv1___Sc0000008	7228614	7229034	421	117	70	0.8632478632478633	+	CCGCAGCUCAGUGGGUAGAGCAUCUGACCG	7	32	46	15	13	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7351454-7351904	Cluster_2876	Pocillopora_meandrina_HIv1___Sc0000008	7351454	7351904	451	273	147	0.358974358974359	.	UGCCGGUAUUCGAGAUUCCUUCCUCUU	19	8	238	3	2	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7352806-7353233	Cluster_2877	Pocillopora_meandrina_HIv1___Sc0000008	7352806	7353233	428	162	50	0.9629629629629629	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	45	2	155	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7698373-7699671	Cluster_2878	Pocillopora_meandrina_HIv1___Sc0000008	7698373	7699671	1299	6830	1619	0.21332357247437775	.	UUUUACACGAUGCUUUGCUUUGGCCUG	403	71	6042	34	310	155	218	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7722487-7722914	Cluster_2879	Pocillopora_meandrina_HIv1___Sc0000008	7722487	7722914	428	89	35	0.9775280898876404	+	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	39	0	87	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7924005-7924423	Cluster_2880	Pocillopora_meandrina_HIv1___Sc0000008	7924005	7924423	419	178	25	1.0	+	UGUCUGUCUGAGUGUCUGU	71	175	1	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8271763-8272196	Cluster_2881	Pocillopora_meandrina_HIv1___Sc0000008	8271763	8272196	434	818	84	0.017114914425427872	-	UGAAGUUAUCCUAAACUGCAGACUUAGC	223	5	801	2	6	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8294890-8295318	Cluster_2882	Pocillopora_meandrina_HIv1___Sc0000008	8294890	8295318	429	93	18	0.967741935483871	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	42	0	92	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8299092-8299520	Cluster_2883	Pocillopora_meandrina_HIv1___Sc0000008	8299092	8299520	429	171	65	0.0	-	UGUAUUUACAUUGUAUUGUGAUCGAGACUUG	21	1	169	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8324578-8324978	Cluster_2884	Pocillopora_meandrina_HIv1___Sc0000008	8324578	8324978	401	272	185	1.0	+	AUCAGCGAGCUCAGGAUGCCAU	5	84	93	30	27	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8326178-8326593	Cluster_2885	Pocillopora_meandrina_HIv1___Sc0000008	8326178	8326593	416	273	190	0.9963369963369964	+	AUCUAUGGUAACAUGACUGAAGACU	6	62	117	17	25	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8327199-8327617	Cluster_2886	Pocillopora_meandrina_HIv1___Sc0000008	8327199	8327617	419	256	174	1.0	+	GAUGGGACUUGUUAAAAGAGC	11	56	113	29	33	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8393840-8394264	Cluster_2887	Pocillopora_meandrina_HIv1___Sc0000008	8393840	8394264	425	179	114	1.0	+	AUAGGACCUUUGACUUAGAUAAGCA	28	20	111	14	6	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8428576-8428997	Cluster_2888	Pocillopora_meandrina_HIv1___Sc0000008	8428576	8428997	422	730	20	0.0	-	CGGCUUGAAAAAAAAAAAAA	146	472	0	138	62	57	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8460960-8461377	Cluster_2889	Pocillopora_meandrina_HIv1___Sc0000008	8460960	8461377	418	152	80	1.0	+	UGACAAUGAUGACUUGUUCUCCCACU	12	41	80	9	11	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8497463-8497917	Cluster_2890	Pocillopora_meandrina_HIv1___Sc0000008	8497463	8497917	455	420	77	0.9976190476190476	+	UUCCUUCAUCUGUUAAGUUAUU	92	21	80	15	125	48	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8601589-8602001	Cluster_2891	Pocillopora_meandrina_HIv1___Sc0000008	8601589	8602001	413	187	134	0.983957219251337	+	UGAGGAGACUGUGUCCAC	7	51	58	28	19	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8604004-8604428	Cluster_2892	Pocillopora_meandrina_HIv1___Sc0000008	8604004	8604428	425	289	198	1.0	+	CUACUGCAAGAAGGGACU	7	88	96	20	43	17	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8907187-8907932	Cluster_2893	Pocillopora_meandrina_HIv1___Sc0000008	8907187	8907932	746	1292	307	0.15944272445820434	-	UACCAUAGAACUUUCCAGAACAUUUCAUC	155	20	1056	15	18	128	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9290101-9290510	Cluster_2894	Pocillopora_meandrina_HIv1___Sc0000008	9290101	9290510	410	89	32	0.7078651685393258	.	UGUCCACCCCCCACCGGCUGC	17	4	52	17	8	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9406621-9407048	Cluster_2895	Pocillopora_meandrina_HIv1___Sc0000008	9406621	9407048	428	205	80	0.9853658536585366	+	UCUGAAUUAUCCCGGGUCUCGGCAUUUUU	20	14	176	7	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9421657-9422077	Cluster_2896	Pocillopora_meandrina_HIv1___Sc0000008	9421657	9422077	421	76	22	0.0	-	UCAAUGUGUGAUAUCUGAGUAAACAGGGC	21	0	72	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9467065-9467478	Cluster_2897	Pocillopora_meandrina_HIv1___Sc0000008	9467065	9467478	414	261	195	0.007662835249042145	-	AGAAUUUGGGCGUGCUGAUGAA	9	68	108	18	29	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9469902-9470319	Cluster_2898	Pocillopora_meandrina_HIv1___Sc0000008	9469902	9470319	418	272	189	0.003676470588235294	-	GAGAUGUAGAAAAAUGCAAGGAGU	5	67	110	22	24	19	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9479573-9479980	Cluster_2899	Pocillopora_meandrina_HIv1___Sc0000008	9479573	9479980	408	120	67	0.0	-	UACAUCUCUAGGUGCAGGACU	9	21	41	24	8	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9498200-9498707	Cluster_2900	Pocillopora_meandrina_HIv1___Sc0000008	9498200	9498707	508	1378	521	0.9927431059506531	+	CGUGAGACCUAAGGGGCU	73	538	402	109	115	119	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9701479-9701891	Cluster_2901	Pocillopora_meandrina_HIv1___Sc0000008	9701479	9701891	413	90	44	0.022222222222222223	-	UGACGAUUUUCGCGGCUCGAUUUUGU	17	0	89	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9778406-9778836	Cluster_2902	Pocillopora_meandrina_HIv1___Sc0000008	9778406	9778836	431	341	88	0.011730205278592375	-	AGUGCAAAUACUCGUGAAAGCUGAUCGCGGU	39	5	284	35	5	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9845969-9846514	Cluster_2903	Pocillopora_meandrina_HIv1___Sc0000008	9845969	9846514	546	1210	223	0.032231404958677684	-	UAACACAACUCGCUUCCGGUCACGACA	195	7	1170	5	1	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9851650-9852069	Cluster_2904	Pocillopora_meandrina_HIv1___Sc0000008	9851650	9852069	420	98	17	0.0	-	AUCUGUGGUUUUUUUAGGGG	72	91	0	4	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9981438-9982373	Cluster_2905	Pocillopora_meandrina_HIv1___Sc0000008	9981438	9982373	936	479	179	0.9352818371607515	+	UGAAGCAAUGAAACUCUGCAAGGACACU	31	30	420	2	11	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9982614-9983087	Cluster_2906	Pocillopora_meandrina_HIv1___Sc0000008	9982614	9983087	474	726	211	0.4118457300275482	.	GAAGUCGAUAAGCGUUGGACUCAGAGU	72	19	670	8	4	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10037456-10037882	Cluster_2907	Pocillopora_meandrina_HIv1___Sc0000008	10037456	10037882	427	202	55	0.7326732673267327	.	UAGUAUAACUUUGAUCUGAUGAAAAUC	109	0	187	0	1	0	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10038202-10038630	Cluster_2908	Pocillopora_meandrina_HIv1___Sc0000008	10038202	10038630	429	426	52	0.9929577464788732	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	314	0	424	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10175853-10176394	Cluster_2909	Pocillopora_meandrina_HIv1___Sc0000008	10175853	10176394	542	356	185	0.0028089887640449437	-	GUGGAACAGCAGAAACUUGAUA	27	52	140	24	56	67	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10274843-10275272	Cluster_2910	Pocillopora_meandrina_HIv1___Sc0000008	10274843	10275272	430	155	27	0.9870967741935484	+	UGAGUAAACCUUCUUUUAAAUUUGAACAUU	62	1	154	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10367613-10368074	Cluster_2911	Pocillopora_meandrina_HIv1___Sc0000008	10367613	10368074	462	15928	646	0.9974259166248116	+	GGGGAUAUAGCUCAGUGGUAGAGCAUU	3776	1565	9301	958	2195	549	1360	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10491245-10491671	Cluster_2912	Pocillopora_meandrina_HIv1___Sc0000008	10491245	10491671	427	177	87	0.05649717514124294	-	UGUUCUCGGUUAUCAGCUCAGAAAUGCG	20	0	173	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10492737-10493162	Cluster_2913	Pocillopora_meandrina_HIv1___Sc0000008	10492737	10493162	426	103	36	0.019417475728155338	-	UGUGUAGAUAUGUCUUUUGGACAGGA	29	0	99	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10559700-10560127	Cluster_2914	Pocillopora_meandrina_HIv1___Sc0000008	10559700	10560127	428	218	74	0.013761467889908258	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	33	6	203	0	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10632661-10633081	Cluster_2915	Pocillopora_meandrina_HIv1___Sc0000008	10632661	10633081	421	385	19	0.9974025974025974	+	UCUGACGAAGGGCUGACACUA	338	16	0	358	9	2	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10670922-10671345	Cluster_2916	Pocillopora_meandrina_HIv1___Sc0000008	10670922	10671345	424	166	91	0.05421686746987952	-	UGAUCAGGACUUUCAGCAUGGAAUAGA	16	8	144	3	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10678356-10679047	Cluster_2917	Pocillopora_meandrina_HIv1___Sc0000008	10678356	10679047	692	2096	984	0.9985687022900763	+	GUUAUCUGAACGGGGCUUACUCUCACUGUGU	51	564	984	137	146	143	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10871176-10871593	Cluster_2918	Pocillopora_meandrina_HIv1___Sc0000008	10871176	10871593	418	92	12	1.0	+	AACUUUUGACAGUGGAUCA	33	92	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10962997-10963428	Cluster_2919	Pocillopora_meandrina_HIv1___Sc0000008	10962997	10963428	432	299	67	0.22073578595317725	.	UAUUCACACGUGUUAUCUCGUCGCUCA	62	7	223	3	0	7	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11053593-11054013	Cluster_2920	Pocillopora_meandrina_HIv1___Sc0000008	11053593	11054013	421	113	51	1.0	+	UAGUGUAUACCUGACGGUUAUUUUUAAUC	18	2	111	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11058234-11058649	Cluster_2921	Pocillopora_meandrina_HIv1___Sc0000008	11058234	11058649	416	200	153	0.995	+	GAUGGUGCCUUGAGGAACUCU	6	37	90	27	12	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11124758-11125185	Cluster_2922	Pocillopora_meandrina_HIv1___Sc0000008	11124758	11125185	428	168	48	1.0	+	UGUAAACGGUCUUCUUCAAAUUUCUGGC	44	0	168	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11127271-11127696	Cluster_2923	Pocillopora_meandrina_HIv1___Sc0000008	11127271	11127696	426	113	34	0.017699115044247787	-	GUUGACGUGAACGGUGUUAGAUGCCGAGC	36	0	110	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11171418-11171956	Cluster_2924	Pocillopora_meandrina_HIv1___Sc0000008	11171418	11171956	539	854	169	0.9988290398126464	+	GUUUUUACCUUCUGGCUGACUGACAGUU	57	199	524	43	19	41	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7686-8110	Cluster_2925	Pocillopora_meandrina_HIv1___Sc0000009	7686	8110	425	75	29	0.02666666666666667	-	UUCGAUCCUAAAUUCUCUCCAUGCUUCUG	20	0	72	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:107419-107849	Cluster_2926	Pocillopora_meandrina_HIv1___Sc0000009	107419	107849	431	190	61	0.9526315789473684	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	37	0	187	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:108027-108454	Cluster_2927	Pocillopora_meandrina_HIv1___Sc0000009	108027	108454	428	336	180	0.8095238095238095	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	30	1	292	2	10	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:108788-111195	Cluster_2928	Pocillopora_meandrina_HIv1___Sc0000009	108788	111195	2408	4214	1350	0.92406264831514	+	UGUACAACCAUCCGAUACUCUUGU	690	29	2995	25	22	68	1075	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:111398-112649	Cluster_2929	Pocillopora_meandrina_HIv1___Sc0000009	111398	112649	1252	1512	690	0.8816137566137566	+	UGAUCAGAUUCGUAACAGGCAAAGCAUA	62	53	1351	8	16	28	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:112800-113228	Cluster_2930	Pocillopora_meandrina_HIv1___Sc0000009	112800	113228	429	573	254	0.8115183246073299	+	UCCGAGAGCUUUGUUCACAUAGGCCAUU	73	54	461	8	10	14	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:113509-114675	Cluster_2931	Pocillopora_meandrina_HIv1___Sc0000009	113509	114675	1167	1405	580	0.8661921708185053	+	UACAAUAACCUCUGAUUUCACUAAAUG	77	7	1294	7	14	22	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:116221-116648	Cluster_2932	Pocillopora_meandrina_HIv1___Sc0000009	116221	116648	428	274	105	0.10583941605839416	-	AGUAGUUUCACUCUUUGGGCAAAAUAUU	68	17	244	7	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:140077-140504	Cluster_2933	Pocillopora_meandrina_HIv1___Sc0000009	140077	140504	428	160	35	0.0125	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	77	1	155	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:140964-141380	Cluster_2934	Pocillopora_meandrina_HIv1___Sc0000009	140964	141380	417	185	117	0.010810810810810811	-	AAUGAAAUGUUUAAACGAAAAUAGUAGAAU	12	1	171	5	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:143286-143715	Cluster_2935	Pocillopora_meandrina_HIv1___Sc0000009	143286	143715	430	1027	78	0.0	-	UGCAGUGGUUUUCUGGAUCCUGAUUGGUG	397	14	1009	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:171845-172273	Cluster_2936	Pocillopora_meandrina_HIv1___Sc0000009	171845	172273	429	164	63	0.012195121951219513	-	GGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	15	4	154	2	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:201573-202002	Cluster_2937	Pocillopora_meandrina_HIv1___Sc0000009	201573	202002	430	886	135	0.006772009029345372	-	UUCGAUCCUAAAUUCUCUCCAUGCUUCUG	232	17	759	12	18	53	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:239914-241737	Cluster_2938	Pocillopora_meandrina_HIv1___Sc0000009	239914	241737	1824	26779	2996	0.9347249710594122	+	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2262	235	25417	81	132	337	577	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:282982-283409	Cluster_2939	Pocillopora_meandrina_HIv1___Sc0000009	282982	283409	428	155	53	0.025806451612903226	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	57	0	146	4	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:286345-286774	Cluster_2940	Pocillopora_meandrina_HIv1___Sc0000009	286345	286774	430	432	95	0.0	-	GGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	66	5	413	3	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:331520-331945	Cluster_2941	Pocillopora_meandrina_HIv1___Sc0000009	331520	331945	426	166	86	0.6807228915662651	.	AACUACUUGAACUGGUUCGCCUUAAUGA	16	13	111	28	3	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:349357-349766	Cluster_2942	Pocillopora_meandrina_HIv1___Sc0000009	349357	349766	410	80	43	0.0125	-	UGCUGUGGUUCUUUGGAUCCUGAUUGGUG	13	7	68	1	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:363140-363673	Cluster_2943	Pocillopora_meandrina_HIv1___Sc0000009	363140	363673	534	3572	229	0.6906494960806271	.	UUACUUAAAUGUUAUUGGUUUGU	750	45	1067	17	1138	1222	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:366415-366844	Cluster_2944	Pocillopora_meandrina_HIv1___Sc0000009	366415	366844	430	990	72	0.0	-	UGCAGUGGUUUUCUGGAUCCUGAUUGGUG	359	13	965	10	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:447553-447981	Cluster_2945	Pocillopora_meandrina_HIv1___Sc0000009	447553	447981	429	270	37	0.003703703703703704	-	UAGGACAACUGAGAAUCCACGUAGACUC	100	0	267	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:478711-479133	Cluster_2946	Pocillopora_meandrina_HIv1___Sc0000009	478711	479133	423	295	195	0.29491525423728815	.	CAUCACAUCGUCCACUCUGGCC	12	68	110	28	34	24	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:479265-479689	Cluster_2947	Pocillopora_meandrina_HIv1___Sc0000009	479265	479689	425	229	104	0.0	-	CACGUCACUGUCAAAAAA	36	73	95	17	8	9	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:480273-481323	Cluster_2948	Pocillopora_meandrina_HIv1___Sc0000009	480273	481323	1051	1739	575	0.0	-	GCAGUAUGAUGAAAGAUUAUGA	155	314	849	116	241	105	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:504251-504671	Cluster_2949	Pocillopora_meandrina_HIv1___Sc0000009	504251	504671	421	387	25	0.028423772609819122	-	CACUUCCUGGAGUUAAGGCU	140	253	1	128	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:539163-539602	Cluster_2950	Pocillopora_meandrina_HIv1___Sc0000009	539163	539602	440	407	191	0.0343980343980344	-	UGCGGCAUGACCUUUGAAAGGCA	20	67	152	28	62	66	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:554654-555074	Cluster_2951	Pocillopora_meandrina_HIv1___Sc0000009	554654	555074	421	135	66	0.6074074074074074	.	GUGGAGUUAAAAGAAGGGACAACA	14	9	94	3	2	4	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:691221-691863	Cluster_2952	Pocillopora_meandrina_HIv1___Sc0000009	691221	691863	643	862	443	0.0	-	AAUCUUUCGCAGCAUUUUAGACU	34	200	302	53	96	137	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:692538-692943	Cluster_2953	Pocillopora_meandrina_HIv1___Sc0000009	692538	692943	406	122	62	0.00819672131147541	-	UCAAGAUCUUUCUGUGCAUCCUCUCAUGAA	13	2	118	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:698404-698818	Cluster_2954	Pocillopora_meandrina_HIv1___Sc0000009	698404	698818	415	96	62	0.010416666666666666	-	AGAUGGAAAAAAUUGUGAUCUUUGCA	11	14	57	3	8	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:700978-701398	Cluster_2955	Pocillopora_meandrina_HIv1___Sc0000009	700978	701398	421	153	100	0.0	-	AGAAAGGCGUUGGUGCAGGAGACA	5	48	43	22	13	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:710225-710651	Cluster_2956	Pocillopora_meandrina_HIv1___Sc0000009	710225	710651	427	113	39	0.6460176991150443	.	UGGAAAGAAAACACUGGAAAAUUGAUGAUA	18	3	106	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1103767-1104213	Cluster_2957	Pocillopora_meandrina_HIv1___Sc0000009	1103767	1104213	447	2827	259	0.9582596391934913	+	UGAGACAGUACACACGAUUUGAUAU	679	18	2767	3	3	23	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1104286-1104715	Cluster_2958	Pocillopora_meandrina_HIv1___Sc0000009	1104286	1104715	430	7119	236	0.9914313808119117	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	2006	27	6865	102	10	6	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1144895-1145321	Cluster_2959	Pocillopora_meandrina_HIv1___Sc0000009	1144895	1145321	427	98	29	0.0	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	27	0	98	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1362205-1363105	Cluster_2960	Pocillopora_meandrina_HIv1___Sc0000009	1362205	1363105	901	1273	339	0.8947368421052632	+	UGAAAUCGUCUAAACGAGAUAACAUCUGCUU	136	5	1182	33	2	9	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1446195-1446622	Cluster_2961	Pocillopora_meandrina_HIv1___Sc0000009	1446195	1446622	428	173	73	0.9942196531791907	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	6	165	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1447923-1448343	Cluster_2962	Pocillopora_meandrina_HIv1___Sc0000009	1447923	1448343	421	81	30	0.9506172839506173	+	UGAACUUGAACUAUUUGCUGGAGACGAAAG	28	0	78	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1449346-1450173	Cluster_2963	Pocillopora_meandrina_HIv1___Sc0000009	1449346	1450173	828	392	105	0.9821428571428571	+	UAGGACAACUGAGAAUCCACGUAGACUC	106	1	378	1	6	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1753899-1754316	Cluster_2964	Pocillopora_meandrina_HIv1___Sc0000009	1753899	1754316	418	142	15	0.971830985915493	+	CGGCCUGAAAAAAAAAAA	94	139	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1834616-1835044	Cluster_2965	Pocillopora_meandrina_HIv1___Sc0000009	1834616	1835044	429	168	36	0.9583333333333334	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	59	0	168	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1843950-1844472	Cluster_2966	Pocillopora_meandrina_HIv1___Sc0000009	1843950	1844472	523	909	256	0.8976897689768977	+	UGCUGAAAAUCUGGACUUCUCGUAGAGC	112	11	859	2	2	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2086374-2087156	Cluster_2967	Pocillopora_meandrina_HIv1___Sc0000009	2086374	2087156	783	825	223	0.9927272727272727	+	UGAAAGAGAGCGUGCUGUCAAUAUUUAGAC	109	6	804	2	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2662023-2662460	Cluster_2968	Pocillopora_meandrina_HIv1___Sc0000009	2662023	2662460	438	374	123	0.026737967914438502	-	UCUAGACAAAUAACUCUGAUAUUUA	56	9	343	0	3	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2663671-2664213	Cluster_2969	Pocillopora_meandrina_HIv1___Sc0000009	2663671	2664213	543	324	102	0.5308641975308642	.	CUGGAGUGAAGAAAGAUUUGACCUUA	49	3	303	2	1	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3334048-3334475	Cluster_2970	Pocillopora_meandrina_HIv1___Sc0000009	3334048	3334475	428	126	49	0.23809523809523808	.	AUUUGUGCUAGAAAGAAUCCGCC	18	2	93	0	0	28	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3388787-3389212	Cluster_2971	Pocillopora_meandrina_HIv1___Sc0000009	3388787	3389212	426	110	37	0.01818181818181818	-	UGUGUAGAUAUGUCUUUUGGACAGGA	26	0	108	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3732208-3733282	Cluster_2972	Pocillopora_meandrina_HIv1___Sc0000009	3732208	3733282	1075	1017	472	0.063913470993117	-	UGAGUUUGACGGUUUUGAUCCGAUGUUAUC	42	11	961	6	6	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3894900-3894992	Cluster_2973	Pocillopora_meandrina_HIv1___Sc0000009	3894900	3894992	93	578	48	0.0017301038062283738	-	UAGCAUAACAUUGUAAG	330	351	7	3	170	45	2	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000009:3944407-3945806	Cluster_2974	Pocillopora_meandrina_HIv1___Sc0000009	3944407	3945806	1400	7578	1193	0.08036421219319081	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	1553	45	7163	22	20	97	231	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3945827-3947085	Cluster_2975	Pocillopora_meandrina_HIv1___Sc0000009	3945827	3947085	1259	1795	533	0.23899721448467967	.	UAACUCCGAUCCGAUGACCUAGAAAGUC	138	10	1651	4	26	31	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3947477-3948158	Cluster_2976	Pocillopora_meandrina_HIv1___Sc0000009	3947477	3948158	682	283	141	0.08480565371024736	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	26	2	267	2	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4102972-4103398	Cluster_2977	Pocillopora_meandrina_HIv1___Sc0000009	4102972	4103398	427	222	23	1.0	+	AAGAGAACUAAGAAAAAAAAAAAAAA	59	0	208	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4278823-4279251	Cluster_2978	Pocillopora_meandrina_HIv1___Sc0000009	4278823	4279251	429	70	5	0.0	-	UAAGAAAUCUUCCACUGAUCGUUGAGUUC	64	0	70	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4289448-4290159	Cluster_2979	Pocillopora_meandrina_HIv1___Sc0000009	4289448	4290159	712	642	191	0.11682242990654206	-	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	27	16	554	6	14	11	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4517540-4518080	Cluster_2980	Pocillopora_meandrina_HIv1___Sc0000009	4517540	4518080	541	580	142	0.7844827586206896	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	184	2	560	3	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4557501-4557926	Cluster_2981	Pocillopora_meandrina_HIv1___Sc0000009	4557501	4557926	426	92	45	0.0	-	UGACGUCCAAACGAGCCUGAUCUUGAUG	13	1	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4558097-4558525	Cluster_2982	Pocillopora_meandrina_HIv1___Sc0000009	4558097	4558525	429	2708	90	0.0	-	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1642	7	2693	2	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4705225-4705659	Cluster_2983	Pocillopora_meandrina_HIv1___Sc0000009	4705225	4705659	435	697	149	0.9167862266857962	+	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	44	20	614	7	10	5	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4744138-4744895	Cluster_2984	Pocillopora_meandrina_HIv1___Sc0000009	4744138	4744895	758	991	361	0.9485368314833501	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	63	6	961	4	3	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4745617-4746031	Cluster_2985	Pocillopora_meandrina_HIv1___Sc0000009	4745617	4746031	415	149	90	0.87248322147651	+	UCCGCUACGUUUUGCUCUCCUGGGACGUGU	11	4	134	3	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4746609-4747511	Cluster_2986	Pocillopora_meandrina_HIv1___Sc0000009	4746609	4747511	903	1029	319	0.9135082604470359	+	UGAGACUUGUUGUUGGGUAACUGACGUG	152	11	967	6	6	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4747548-4749568	Cluster_2987	Pocillopora_meandrina_HIv1___Sc0000009	4747548	4749568	2021	6220	1681	0.7946945337620579	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	434	171	5617	28	43	157	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4759035-4759464	Cluster_2988	Pocillopora_meandrina_HIv1___Sc0000009	4759035	4759464	430	347	52	0.0	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	151	0	347	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4760218-4760814	Cluster_2989	Pocillopora_meandrina_HIv1___Sc0000009	4760218	4760814	597	5625	486	0.0028444444444444446	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	819	8	5571	5	5	16	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4775411-4776044	Cluster_2990	Pocillopora_meandrina_HIv1___Sc0000009	4775411	4776044	634	743	220	0.063257065948856	-	UGUAGAAUCAAUCUGUUACUAAGACACC	114	6	691	16	2	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4800370-4800797	Cluster_2991	Pocillopora_meandrina_HIv1___Sc0000009	4800370	4800797	428	169	102	0.14792899408284024	-	UGUUGUCCUUUGUUCAGUCUGAUUAACCUU	16	3	159	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4801046-4801960	Cluster_2992	Pocillopora_meandrina_HIv1___Sc0000009	4801046	4801960	915	888	301	0.057432432432432436	-	UGAUGUCUUCGACUGCAGAUCUGGCAGC	45	3	802	3	5	18	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4930947-4931371	Cluster_2993	Pocillopora_meandrina_HIv1___Sc0000009	4930947	4931371	425	129	37	0.007751937984496124	-	CGAUUGUAGCUCUGAUUUCCAU	14	13	69	5	19	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4943767-4944198	Cluster_2994	Pocillopora_meandrina_HIv1___Sc0000009	4943767	4944198	432	11375	220	0.0005274725274725274	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	3966	6	11363	3	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4948006-4948435	Cluster_2995	Pocillopora_meandrina_HIv1___Sc0000009	4948006	4948435	430	9911	212	0.0015134698819493492	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	6210	24	9786	13	10	15	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4983713-4984141	Cluster_2996	Pocillopora_meandrina_HIv1___Sc0000009	4983713	4984141	429	244	127	0.04918032786885246	-	GCAGCACCUGUACUAUGCCAGCCAUCCUAU	22	24	196	4	7	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4986241-4986667	Cluster_2997	Pocillopora_meandrina_HIv1___Sc0000009	4986241	4986667	427	169	90	0.029585798816568046	-	UGUGCUGCAAUUAACUGAGUUGGAGGAAC	32	20	122	5	6	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5001483-5001912	Cluster_2998	Pocillopora_meandrina_HIv1___Sc0000009	5001483	5001912	430	330	80	0.006060606060606061	-	UUUAGAAGCAUUGUCUGCUGGUCUUCCCA	89	10	300	2	4	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5013395-5013823	Cluster_2999	Pocillopora_meandrina_HIv1___Sc0000009	5013395	5013823	429	98	34	0.0	-	GAAUUAAGGAGUGUCCACUUGAGCAGAGA	45	1	94	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5019555-5020111	Cluster_3000	Pocillopora_meandrina_HIv1___Sc0000009	5019555	5020111	557	602	272	0.9119601328903655	+	UACUCUGUUGGAUGCUCGUAUAUUAUUCAGC	42	15	550	3	4	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5020191-5020607	Cluster_3001	Pocillopora_meandrina_HIv1___Sc0000009	5020191	5020607	417	106	48	0.9528301886792453	+	UGGAAAUUCUGUCGGCUUCAGUGCCAC	20	0	102	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5039382-5039812	Cluster_3002	Pocillopora_meandrina_HIv1___Sc0000009	5039382	5039812	431	3403	238	0.0002938583602703497	-	CUUAGAAGCGUUGUCUGCUGGUCUUCCCA	884	36	3323	5	10	8	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5051287-5051715	Cluster_3003	Pocillopora_meandrina_HIv1___Sc0000009	5051287	5051715	429	287	60	0.06620209059233449	-	CCGUAUUUGAUUGCCGUUUGUUCUCUGC	83	16	261	0	4	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5065799-5066228	Cluster_3004	Pocillopora_meandrina_HIv1___Sc0000009	5065799	5066228	430	3634	158	0.001375894331315355	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	1677	37	3093	9	45	234	216	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5076934-5077372	Cluster_3005	Pocillopora_meandrina_HIv1___Sc0000009	5076934	5077372	439	6997	319	0.009146777190224381	-	CGGUACUGGAAUUAACUGAGUUGGACG	1814	58	6676	27	83	69	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5151780-5152209	Cluster_3006	Pocillopora_meandrina_HIv1___Sc0000009	5151780	5152209	430	307	52	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	107	5	273	0	9	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5154880-5155308	Cluster_3007	Pocillopora_meandrina_HIv1___Sc0000009	5154880	5155308	429	227	71	0.0	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	50	2	214	1	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5167006-5167481	Cluster_3008	Pocillopora_meandrina_HIv1___Sc0000009	5167006	5167481	476	587	78	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	312	4	567	4	6	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5167505-5167932	Cluster_3009	Pocillopora_meandrina_HIv1___Sc0000009	5167505	5167932	428	87	18	0.9540229885057471	+	ACAACAACAAGGUCCUGUUAUGAAAAUG	43	0	82	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5192268-5192686	Cluster_3010	Pocillopora_meandrina_HIv1___Sc0000009	5192268	5192686	419	165	99	0.10909090909090909	-	GCAGCACCUGUACUAUGCCAGCCAUCCUA	11	27	119	3	5	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5195132-5195564	Cluster_3011	Pocillopora_meandrina_HIv1___Sc0000009	5195132	5195564	433	35662	462	0.0	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	14740	41	35515	24	25	27	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5199379-5199854	Cluster_3012	Pocillopora_meandrina_HIv1___Sc0000009	5199379	5199854	476	569	52	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	293	2	564	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5249164-5249601	Cluster_3013	Pocillopora_meandrina_HIv1___Sc0000009	5249164	5249601	438	201	115	0.11940298507462686	-	GCAGCACCUGUACUAUGCCAGCCAUCCUAUC	15	38	130	9	8	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5251627-5252035	Cluster_3014	Pocillopora_meandrina_HIv1___Sc0000009	5251627	5252035	409	181	123	0.0055248618784530384	-	UGGAGAGACUGGAUCUGAGUUACAACC	5	19	138	9	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5252241-5252692	Cluster_3015	Pocillopora_meandrina_HIv1___Sc0000009	5252241	5252692	452	31932	576	0.006419892271076037	-	CGGUGCAGGAAUUAACUGAGUUGGACG	9433	843	27143	1298	890	763	995	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5312552-5312992	Cluster_3016	Pocillopora_meandrina_HIv1___Sc0000009	5312552	5312992	441	14389	429	0.00027799013135033706	-	AGUGCUAGAAUUAACUGAGUUGGACGAACU	2369	163	13845	128	118	80	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5350475-5350892	Cluster_3017	Pocillopora_meandrina_HIv1___Sc0000009	5350475	5350892	418	434	34	0.002304147465437788	-	AACUUUUGACGGUGGA	228	434	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5381071-5381529	Cluster_3018	Pocillopora_meandrina_HIv1___Sc0000009	5381071	5381529	459	18519	658	0.015821588638695393	-	CGGUGCUGAAAUUAACUGAGUUGGAGA	3725	701	13063	274	453	765	3263	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5385814-5386269	Cluster_3019	Pocillopora_meandrina_HIv1___Sc0000009	5385814	5386269	456	1726	162	0.0017381228273464658	-	CUCAAGCCGAGCAGACUGCCUACAAUCUGUG	400	64	1623	15	4	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5426650-5427080	Cluster_3020	Pocillopora_meandrina_HIv1___Sc0000009	5426650	5427080	431	526	190	0.02091254752851711	-	ACAGCACCUGUACUAUGCCAGCCAUCCCAU	59	58	388	26	28	18	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5429088-5429525	Cluster_3021	Pocillopora_meandrina_HIv1___Sc0000009	5429088	5429525	438	1567	132	0.0	-	GGUGCAGGAAUUAACUGAGUUGGACGAACU	458	2	1550	2	5	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5461464-5461895	Cluster_3022	Pocillopora_meandrina_HIv1___Sc0000009	5461464	5461895	432	3953	285	0.0035416139640779155	-	AGUGCAGGAAUUAACUGAGUUGGACAAACU	927	74	3739	49	25	25	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5521032-5521460	Cluster_3023	Pocillopora_meandrina_HIv1___Sc0000009	5521032	5521460	429	161	51	0.0	-	CUUAGAAGCAUUGUCUGCUGGUCUUCCCA	36	10	147	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5531819-5532250	Cluster_3024	Pocillopora_meandrina_HIv1___Sc0000009	5531819	5532250	432	29871	326	0.0001339091426467142	-	UGUGCUAGAAUUAACUGAGUUGGAGAAACU	12023	151	27360	115	61	2080	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5573592-5574021	Cluster_3025	Pocillopora_meandrina_HIv1___Sc0000009	5573592	5574021	430	4169	109	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	2754	10	4108	8	4	5	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5616753-5617179	Cluster_3026	Pocillopora_meandrina_HIv1___Sc0000009	5616753	5617179	427	142	56	0.07042253521126761	-	GCAGCACCUGUACUAUGCCAGUCAUCCCAU	22	23	111	1	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5619718-5620348	Cluster_3027	Pocillopora_meandrina_HIv1___Sc0000009	5619718	5620348	631	16829	401	0.006417493612217006	-	GGUGCAGGAAUUAACUGAGUUGGACGAACU	4616	207	15982	152	197	116	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5624158-5624633	Cluster_3028	Pocillopora_meandrina_HIv1___Sc0000009	5624158	5624633	476	2918	127	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	1830	3	2860	8	1	6	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5631674-5632099	Cluster_3029	Pocillopora_meandrina_HIv1___Sc0000009	5631674	5632099	426	621	146	0.9967793880837359	+	GUUAACGAACGAGACCUUGACCUGU	67	340	105	44	55	42	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5651649-5652072	Cluster_3030	Pocillopora_meandrina_HIv1___Sc0000009	5651649	5652072	424	88	28	0.0	-	UACUCCGACACUCCGAUAUGUGAUACUAC	43	0	85	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5684055-5684484	Cluster_3031	Pocillopora_meandrina_HIv1___Sc0000009	5684055	5684484	430	408	119	0.0024509803921568627	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	107	10	382	2	6	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5689078-5689507	Cluster_3032	Pocillopora_meandrina_HIv1___Sc0000009	5689078	5689507	430	275	125	0.19636363636363635	-	GCAGCACCUGUACUAUGCCAGCCAUCCUA	30	34	212	6	6	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5691732-5692175	Cluster_3033	Pocillopora_meandrina_HIv1___Sc0000009	5691732	5692175	444	3036	230	0.058959156785243744	-	GGUGCUGGAAUUAACUGAGUUGGAAGAAC	787	287	2213	84	83	52	317	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5696195-5696623	Cluster_3034	Pocillopora_meandrina_HIv1___Sc0000009	5696195	5696623	429	301	32	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	206	0	296	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5749814-5750260	Cluster_3035	Pocillopora_meandrina_HIv1___Sc0000009	5749814	5750260	447	452	140	0.19690265486725664	-	GCAGCACCUGUACUAUGCCAGCCAUCCUA	66	42	377	4	11	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5753007-5753436	Cluster_3036	Pocillopora_meandrina_HIv1___Sc0000009	5753007	5753436	430	469	82	0.010660980810234541	-	UGUGCUAGAAUUAACUGAGUUGGAGAAAUU	184	8	362	8	11	61	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5808018-5808447	Cluster_3037	Pocillopora_meandrina_HIv1___Sc0000009	5808018	5808447	430	365	59	0.0027397260273972603	-	AAGAAUGCGAUAGCCGAUAAAGAAACUACU	182	2	348	1	1	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5818362-5818790	Cluster_3038	Pocillopora_meandrina_HIv1___Sc0000009	5818362	5818790	429	624	122	0.008012820512820512	-	GGUGCUGGAAUUAACUGAGUUGC	203	43	213	16	14	242	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5821920-5822372	Cluster_3039	Pocillopora_meandrina_HIv1___Sc0000009	5821920	5822372	453	236	89	0.9703389830508474	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	41	3	222	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5822529-5822956	Cluster_3040	Pocillopora_meandrina_HIv1___Sc0000009	5822529	5822956	428	338	194	0.8609467455621301	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	22	2	299	3	1	12	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5823085-5827409	Cluster_3041	Pocillopora_meandrina_HIv1___Sc0000009	5823085	5827409	4325	7458	2495	0.9241083400375436	+	UGUACAACCAUCCGAUACUCUUGU	730	92	5874	28	57	124	1283	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5828013-5829181	Cluster_3042	Pocillopora_meandrina_HIv1___Sc0000009	5828013	5829181	1169	1344	562	0.8697916666666666	+	UACAAUAACCUCUGAUUUCACUAAAUG	76	12	1231	9	18	30	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5846449-5846895	Cluster_3043	Pocillopora_meandrina_HIv1___Sc0000009	5846449	5846895	447	683	151	0.09370424597364568	-	AAGAAUGUGAUAGCCAAUAAAGAAAGUACU	145	22	597	6	2	13	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5849548-5850049	Cluster_3044	Pocillopora_meandrina_HIv1___Sc0000009	5849548	5850049	502	433	135	0.0	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	72	4	416	0	4	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5856280-5856701	Cluster_3045	Pocillopora_meandrina_HIv1___Sc0000009	5856280	5856701	422	106	44	0.6320754716981132	.	CCAGUUCCACCAUCUCACCAAU	29	9	30	8	49	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5856893-5857324	Cluster_3046	Pocillopora_meandrina_HIv1___Sc0000009	5856893	5857324	432	16366	299	0.00030551142612733715	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	7046	7	16335	1	4	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5959840-5960535	Cluster_3047	Pocillopora_meandrina_HIv1___Sc0000009	5959840	5960535	696	1605	222	0.9968847352024922	+	UCCAAUCCCCACCGAGAAAGUAUUCAAUAUU	489	13	1571	6	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5961241-5961669	Cluster_3048	Pocillopora_meandrina_HIv1___Sc0000009	5961241	5961669	429	296	96	1.0	+	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	69	4	284	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6213599-6214133	Cluster_3049	Pocillopora_meandrina_HIv1___Sc0000009	6213599	6214133	535	2523	306	0.9397542608006342	+	UGAGACAGUACACACGAUUUGAUAU	518	7	2455	3	4	24	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6222493-6223188	Cluster_3050	Pocillopora_meandrina_HIv1___Sc0000009	6222493	6223188	696	477	207	0.010482180293501049	-	UCUUCAUGAUUUCUUCUACUUUGAAUGUGGC	37	4	464	2	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6234764-6235165	Cluster_3051	Pocillopora_meandrina_HIv1___Sc0000009	6234764	6235165	402	127	49	0.5118110236220472	.	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	27	0	118	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6235924-6236346	Cluster_3052	Pocillopora_meandrina_HIv1___Sc0000009	6235924	6236346	423	121	69	0.6942148760330579	.	UCCCCUAAGGGAGGCUGUGAACUAAUUUUU	9	34	58	19	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6242821-6243422	Cluster_3053	Pocillopora_meandrina_HIv1___Sc0000009	6242821	6243422	602	3052	324	0.935124508519004	+	UGAAUACACAUUACCAGUGAACUUGACUAC	601	13	2909	15	8	23	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6244745-6246358	Cluster_3054	Pocillopora_meandrina_HIv1___Sc0000009	6244745	6246358	1614	1214	328	0.4942339373970346	.	GAAGAAAAUAUUAAAGGAAAAAGGAAUGAC	107	21	1132	7	18	20	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6247112-6247722	Cluster_3055	Pocillopora_meandrina_HIv1___Sc0000009	6247112	6247722	611	778	272	0.40488431876606684	.	AAAGAGCUGAAAAAAAGAAUGUUUC	131	26	670	16	9	17	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6368610-6369361	Cluster_3056	Pocillopora_meandrina_HIv1___Sc0000009	6368610	6369361	752	820	272	0.9670731707317073	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	60	2	799	4	2	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6369656-6370966	Cluster_3057	Pocillopora_meandrina_HIv1___Sc0000009	6369656	6370966	1311	1496	676	0.93048128342246	+	UAAAGUAUCAUUCCUCGUCACGAACCCG	38	13	1387	8	9	12	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6435613-6436040	Cluster_3058	Pocillopora_meandrina_HIv1___Sc0000009	6435613	6436040	428	123	21	0.959349593495935	+	UACCAAGGUCUUGUAGUCUAGUACAACU	70	0	122	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6437275-6437950	Cluster_3059	Pocillopora_meandrina_HIv1___Sc0000009	6437275	6437950	676	1085	383	0.26912442396313363	.	ACGACACCAACGAACAAGACAUCAUCUGUGG	89	12	957	10	14	20	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6543007-6543435	Cluster_3060	Pocillopora_meandrina_HIv1___Sc0000009	6543007	6543435	429	525	49	0.0	-	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	375	0	516	0	2	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6598009-6598600	Cluster_3061	Pocillopora_meandrina_HIv1___Sc0000009	6598009	6598600	592	3129	360	0.9932885906040269	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	535	8	3028	1	1	72	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6907816-6908244	Cluster_3062	Pocillopora_meandrina_HIv1___Sc0000009	6907816	6908244	429	539	43	0.0	-	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	394	1	529	0	0	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7022715-7023169	Cluster_3063	Pocillopora_meandrina_HIv1___Sc0000009	7022715	7023169	455	513	134	0.9844054580896686	+	GUAAACCAGGGGUCGAGAGU	99	350	99	28	22	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7083473-7083888	Cluster_3064	Pocillopora_meandrina_HIv1___Sc0000009	7083473	7083888	416	167	83	0.9880239520958084	+	UAACGAACUAUGACAGCAAGGGCCUCAC	16	0	160	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7089518-7089940	Cluster_3065	Pocillopora_meandrina_HIv1___Sc0000009	7089518	7089940	423	134	44	0.43283582089552236	.	GUUGUUACAACUGAGGCCGAGGU	31	7	52	3	1	43	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7142341-7143043	Cluster_3066	Pocillopora_meandrina_HIv1___Sc0000009	7142341	7143043	703	284	131	0.9330985915492958	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	30	1	270	2	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7144273-7144701	Cluster_3067	Pocillopora_meandrina_HIv1___Sc0000009	7144273	7144701	429	278	141	0.8705035971223022	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	30	3	255	2	2	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7152508-7152913	Cluster_3068	Pocillopora_meandrina_HIv1___Sc0000009	7152508	7152913	406	126	79	0.5238095238095238	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	20	10	105	5	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7160758-7161573	Cluster_3069	Pocillopora_meandrina_HIv1___Sc0000009	7160758	7161573	816	437	127	1.0	+	GAAGACAAAAGAGGUUGGAACACGUUACA	58	27	387	4	10	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7178014-7178443	Cluster_3070	Pocillopora_meandrina_HIv1___Sc0000009	7178014	7178443	430	189	48	0.0	-	UCACUCGUAAGUGGUCGCUCGUAAAUACGU	71	2	181	2	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7206121-7206537	Cluster_3071	Pocillopora_meandrina_HIv1___Sc0000009	7206121	7206537	417	168	101	0.3333333333333333	.	CGCGUGAUUACUUUGACUUC	10	92	2	53	16	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7233774-7234183	Cluster_3072	Pocillopora_meandrina_HIv1___Sc0000009	7233774	7234183	410	167	85	0.4251497005988024	.	UGAAACCCUUGAUCUUCCAGAACGGCUUGA	17	1	135	10	4	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7249231-7249657	Cluster_3073	Pocillopora_meandrina_HIv1___Sc0000009	7249231	7249657	427	259	60	1.0	+	UCUGGAAGCGUUAUCUGCUGGUCUGCC	60	6	234	1	1	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7263451-7263879	Cluster_3074	Pocillopora_meandrina_HIv1___Sc0000009	7263451	7263879	429	438	48	0.997716894977169	+	GAAGACAACAGAGGAUGGAACACAUUACA	196	18	408	4	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7278506-7278932	Cluster_3075	Pocillopora_meandrina_HIv1___Sc0000009	7278506	7278932	427	264	50	1.0	+	UCUGGAAGCGUUAUCUGCUGGUCUGCC	88	2	246	1	1	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7288102-7288531	Cluster_3076	Pocillopora_meandrina_HIv1___Sc0000009	7288102	7288531	430	357	58	1.0	+	CGGACAUUGAGUCAAAAACAGCUGAUGGU	69	3	348	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7291674-7292101	Cluster_3077	Pocillopora_meandrina_HIv1___Sc0000009	7291674	7292101	428	123	22	0.0	-	GAUGGAAUGUGCUGCACAGGAUAGUGAUU	63	18	92	1	9	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7302743-7303173	Cluster_3078	Pocillopora_meandrina_HIv1___Sc0000009	7302743	7303173	431	220	50	1.0	+	UGGAUUAUCAACGUUUAACAGGGAACUUGUU	29	6	208	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7306880-7307308	Cluster_3079	Pocillopora_meandrina_HIv1___Sc0000009	7306880	7307308	429	185	47	0.5405405405405406	.	AACACACGGAAGAAUCAGU	43	51	123	2	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7320316-7320738	Cluster_3080	Pocillopora_meandrina_HIv1___Sc0000009	7320316	7320738	423	336	245	1.0	+	UGUGUUGUUCUUUGGGGC	6	62	147	27	30	28	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7432988-7433530	Cluster_3081	Pocillopora_meandrina_HIv1___Sc0000009	7432988	7433530	543	955	221	0.16544502617801046	-	AACGCUUGUAAAGAAGAGGCUGAGGUG	119	12	879	6	4	10	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7461285-7461711	Cluster_3082	Pocillopora_meandrina_HIv1___Sc0000009	7461285	7461711	427	173	68	0.06358381502890173	-	ACACAAUCAAAGAACUGGGGGAUAUAGU	24	4	140	2	5	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7540988-7541419	Cluster_3083	Pocillopora_meandrina_HIv1___Sc0000009	7540988	7541419	432	1291	191	0.9395817195972115	+	AUGUAGAGUGUCUUUAAGGUCAAUA	221	20	904	5	11	119	232	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7541597-7542025	Cluster_3084	Pocillopora_meandrina_HIv1___Sc0000009	7541597	7542025	429	165	41	0.8666666666666667	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	44	0	158	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7547952-7548382	Cluster_3085	Pocillopora_meandrina_HIv1___Sc0000009	7547952	7548382	431	561	71	0.9750445632798574	+	UAUAGAGUGGAUGCAUUCUGAUCUUUAC	318	2	555	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7553820-7554722	Cluster_3086	Pocillopora_meandrina_HIv1___Sc0000009	7553820	7554722	903	1109	382	0.9630297565374211	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	185	8	1048	5	10	23	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7554812-7555218	Cluster_3087	Pocillopora_meandrina_HIv1___Sc0000009	7554812	7555218	407	192	115	0.890625	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	24	5	175	1	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7555436-7556026	Cluster_3088	Pocillopora_meandrina_HIv1___Sc0000009	7555436	7556026	591	556	199	0.9280575539568345	+	UCCACGUCGUCUUUGGGGUUAAAAUACUU	115	2	508	3	5	17	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7556515-7556950	Cluster_3089	Pocillopora_meandrina_HIv1___Sc0000009	7556515	7556950	436	214	83	0.9439252336448598	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	41	1	200	0	1	11	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7558210-7558629	Cluster_3090	Pocillopora_meandrina_HIv1___Sc0000009	7558210	7558629	420	100	57	0.92	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	21	1	95	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7559916-7561575	Cluster_3091	Pocillopora_meandrina_HIv1___Sc0000009	7559916	7561575	1660	2779	674	0.9334292911119108	+	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	216	56	2539	24	8	43	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7818831-7819256	Cluster_3092	Pocillopora_meandrina_HIv1___Sc0000009	7818831	7819256	426	74	27	0.9864864864864865	+	UGUGGAUAAUUUAAUAACUGCAGUAGGGA	17	0	72	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7893231-7893732	Cluster_3093	Pocillopora_meandrina_HIv1___Sc0000009	7893231	7893732	502	328	121	0.0975609756097561	-	ACACAAUCAAACAACUGGGGGAAAUAGU	23	6	251	9	3	12	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7900058-7900669	Cluster_3094	Pocillopora_meandrina_HIv1___Sc0000009	7900058	7900669	612	403	180	0.9255583126550868	+	UUCGAAUUGUUUGUGAUCCCACACUUCA	38	14	336	0	4	5	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7951089-7951491	Cluster_3095	Pocillopora_meandrina_HIv1___Sc0000009	7951089	7951491	403	127	52	0.30708661417322836	.	UGUAAUACAUGAUAAAAGAACUCCUU	22	1	121	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7954268-7955172	Cluster_3096	Pocillopora_meandrina_HIv1___Sc0000009	7954268	7955172	905	3465	329	0.010966810966810967	-	UCUGGAUUAUAGUCAAGCUCUGUCAUGG	1134	3	3388	5	10	24	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7955219-7955636	Cluster_3097	Pocillopora_meandrina_HIv1___Sc0000009	7955219	7955636	418	86	45	0.023255813953488372	-	UGUAACUCAACUAUUUUAAUUUCUGACUGU	7	0	84	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8094772-8095805	Cluster_3098	Pocillopora_meandrina_HIv1___Sc0000009	8094772	8095805	1034	16220	609	0.9971639950678175	+	UUGGAACGUGUUGCUGAACGCUUGUUGU	5954	313	15677	11	22	163	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8095873-8096303	Cluster_3099	Pocillopora_meandrina_HIv1___Sc0000009	8095873	8096303	431	213	93	0.7323943661971831	.	GUGGAAUUAAAAGAAGGGACAAUUAACAGU	39	6	198	2	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8101210-8101638	Cluster_3100	Pocillopora_meandrina_HIv1___Sc0000009	8101210	8101638	429	394	70	0.9467005076142132	+	AGUGUGAUCAUUGUCAAAAGACUUUUGCA	164	2	371	0	0	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8101892-8102322	Cluster_3101	Pocillopora_meandrina_HIv1___Sc0000009	8101892	8102322	431	1840	237	0.9777173913043479	+	UGUGUUAGACUUUAACAGGAAAGAAUG	650	3	1786	21	7	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8102656-8103065	Cluster_3102	Pocillopora_meandrina_HIv1___Sc0000009	8102656	8103065	410	96	32	0.7604166666666666	.	UGUUACAAAACCAUUAGAACUAUCAGUU	26	0	82	0	4	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8104117-8105817	Cluster_3103	Pocillopora_meandrina_HIv1___Sc0000009	8104117	8105817	1701	4006	1030	0.7503744383424863	.	UUAUAUCUUCGGUCAAAAAGUGCACUUU	380	59	3584	31	22	137	173	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8109946-8110374	Cluster_3104	Pocillopora_meandrina_HIv1___Sc0000009	8109946	8110374	429	1017	129	0.9891838741396264	+	AUGUAGAGUGUCUUUAAGGUCAAUA	180	29	747	5	10	89	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8110551-8110979	Cluster_3105	Pocillopora_meandrina_HIv1___Sc0000009	8110551	8110979	429	172	39	0.8604651162790697	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	54	0	167	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8140529-8140952	Cluster_3106	Pocillopora_meandrina_HIv1___Sc0000009	8140529	8140952	424	118	34	0.2627118644067797	.	UCCAUGAUUUGAGGACUUUCCACUG	17	0	93	0	0	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8147702-8148216	Cluster_3107	Pocillopora_meandrina_HIv1___Sc0000009	8147702	8148216	515	837	135	0.27001194743130225	.	GUGUGAAACAUGUGGCCUCAGGCAGAAAGU	155	3	666	0	1	80	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8241861-8242270	Cluster_3108	Pocillopora_meandrina_HIv1___Sc0000009	8241861	8242270	410	183	106	0.4262295081967213	.	ACUGGAUACAAAACUGCUCGAUGC	20	3	132	1	4	7	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8242348-8243092	Cluster_3109	Pocillopora_meandrina_HIv1___Sc0000009	8242348	8243092	745	353	155	0.036827195467422094	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	57	4	344	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8299725-8300173	Cluster_3110	Pocillopora_meandrina_HIv1___Sc0000009	8299725	8300173	449	458	193	0.17903930131004367	-	UAUGACGUUCCAGAAUCUUUGACAAAA	46	4	428	5	4	2	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8300695-8301124	Cluster_3111	Pocillopora_meandrina_HIv1___Sc0000009	8300695	8301124	430	161	51	0.012422360248447204	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	26	0	160	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8380658-8381106	Cluster_3112	Pocillopora_meandrina_HIv1___Sc0000009	8380658	8381106	449	997	55	0.08926780341023069	-	UGCUUCAUUUCCCUGACUGUAGUCAGC	757	1	980	0	0	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9614509-9614937	Cluster_3113	Pocillopora_meandrina_HIv1___Sc0000009	9614509	9614937	429	133	31	0.18045112781954886	-	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	35	1	126	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9615119-9615547	Cluster_3114	Pocillopora_meandrina_HIv1___Sc0000009	9615119	9615547	429	224	77	0.125	-	AUGUAGAGUGUCUUUAAGGUCAAUA	35	4	192	1	1	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9616179-9616908	Cluster_3115	Pocillopora_meandrina_HIv1___Sc0000009	9616179	9616908	730	403	156	0.7642679900744417	.	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	47	2	345	0	3	7	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9749132-9750247	Cluster_3116	Pocillopora_meandrina_HIv1___Sc0000009	9749132	9750247	1116	1094	405	0.17641681901279707	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	79	10	1020	5	8	20	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9750648-9751073	Cluster_3117	Pocillopora_meandrina_HIv1___Sc0000009	9750648	9751073	426	104	39	0.04807692307692308	-	UACGUGUAGACUGAGCCAUUGCCUAGU	31	3	80	1	2	0	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9992975-9993394	Cluster_3118	Pocillopora_meandrina_HIv1___Sc0000009	9992975	9993394	420	121	55	0.9752066115702479	+	UAUGUCACUUUUGUCGAAUGGUAAAUCGG	20	5	111	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10299098-10299522	Cluster_3119	Pocillopora_meandrina_HIv1___Sc0000009	10299098	10299522	425	304	65	0.08223684210526316	-	AUGGACAGAACACAGGAAGUGCU	61	6	120	4	9	134	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10301166-10301593	Cluster_3120	Pocillopora_meandrina_HIv1___Sc0000009	10301166	10301593	428	135	48	1.0	+	UGGGAUUGCUUACUCCUGGUGUUGGUAU	22	0	127	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10335940-10336465	Cluster_3121	Pocillopora_meandrina_HIv1___Sc0000009	10335940	10336465	526	21477	1243	0.0009312287563439959	-	UGGGAAUACCCCGUGUUGUAGGCUU	1705	4315	8620	848	1764	3400	2530	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10336550-10336970	Cluster_3122	Pocillopora_meandrina_HIv1___Sc0000009	10336550	10336970	421	91	25	0.978021978021978	+	AUCGCUUCUCGGCCUUUUGGC	44	17	2	62	9	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10340567-10341094	Cluster_3123	Pocillopora_meandrina_HIv1___Sc0000009	10340567	10341094	528	5215	786	0.9996164908916587	+	GUUGCCUCGGUAUAGCACUACCU	429	1808	1430	318	304	1009	346	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10344529-10344967	Cluster_3124	Pocillopora_meandrina_HIv1___Sc0000009	10344529	10344967	439	437	155	0.9908466819221968	+	UGUGAUCAAGGAGGCAGUCCU	42	131	84	109	50	40	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10363329-10363752	Cluster_3125	Pocillopora_meandrina_HIv1___Sc0000009	10363329	10363752	424	298	70	0.087248322147651	-	AUGGACAGAACACAGGAAGUGCU	67	4	103	6	8	143	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10446213-10446957	Cluster_3126	Pocillopora_meandrina_HIv1___Sc0000009	10446213	10446957	745	585	231	0.9299145299145299	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	58	7	562	5	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10447035-10447641	Cluster_3127	Pocillopora_meandrina_HIv1___Sc0000009	10447035	10447641	607	447	198	0.4541387024608501	.	CGCAUCUUUAUCCAUCACUCAAAGCGGACU	54	5	380	5	2	14	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10447668-10448072	Cluster_3128	Pocillopora_meandrina_HIv1___Sc0000009	10447668	10448072	405	127	84	0.9291338582677166	+	UGAUUGCAGAGGCUUGCGUAUACUGAUA	7	5	112	1	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10480018-10480514	Cluster_3129	Pocillopora_meandrina_HIv1___Sc0000009	10480018	10480514	497	382	158	0.981675392670157	+	UGAGAAUCUGUUUGGGUCAAUGAUCACAUU	102	2	369	1	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10482167-10483473	Cluster_3130	Pocillopora_meandrina_HIv1___Sc0000009	10482167	10483473	1307	839	464	0.9845053635280095	+	UGCACUCGGAUCUCUACCCAUUCUAUGAGU	17	15	802	1	4	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10484435-10484992	Cluster_3131	Pocillopora_meandrina_HIv1___Sc0000009	10484435	10484992	558	559	191	0.964221824686941	+	AUCCGGCUCGAAGGACCA	106	159	379	0	3	4	14	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000009:10656954-10657383	Cluster_3132	Pocillopora_meandrina_HIv1___Sc0000009	10656954	10657383	430	376	52	0.0026595744680851063	-	AUUGUUUGGAUGUGUCUGCAAAUGCAGUGC	98	0	372	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10657566-10657989	Cluster_3133	Pocillopora_meandrina_HIv1___Sc0000009	10657566	10657989	424	138	46	0.2246376811594203	.	AUGUAGAGUGUCUUUAAGGUCAAC	53	4	50	1	0	15	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10658624-10659053	Cluster_3134	Pocillopora_meandrina_HIv1___Sc0000009	10658624	10659053	430	757	52	0.9709379128137384	+	AAAGGAAUGACAAACAUCUGCCCCAAAGGU	388	3	748	0	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10749849-10750278	Cluster_3135	Pocillopora_meandrina_HIv1___Sc0000009	10749849	10750278	430	205	65	0.15609756097560976	-	UUUUCCAUUUCGUCUUUCAGAAAGCUGAU	35	0	199	0	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10752545-10752967	Cluster_3136	Pocillopora_meandrina_HIv1___Sc0000009	10752545	10752967	423	192	112	0.0	-	UUCUAUACCAUCGCCGAAAUGUCUGGACU	15	1	182	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10997752-10999000	Cluster_3137	Pocillopora_meandrina_HIv1___Sc0000009	10997752	10999000	1249	1416	380	0.9611581920903954	+	UAAGAUUUACACACUGAUCGACCAUGU	487	6	1373	6	3	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10999322-10999801	Cluster_3138	Pocillopora_meandrina_HIv1___Sc0000009	10999322	10999801	480	375	141	0.9546666666666667	+	UCCAAUCACACACAGUUCUCCUGCGGC	91	0	357	0	2	0	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10999818-11000312	Cluster_3139	Pocillopora_meandrina_HIv1___Sc0000009	10999818	11000312	495	791	244	0.93173198482933	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	62	3	754	0	7	4	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11000754-11001159	Cluster_3140	Pocillopora_meandrina_HIv1___Sc0000009	11000754	11001159	406	228	143	0.6447368421052632	.	CCCAAUACCAACUGUAGAUGAACUGCUAC	11	8	183	1	2	13	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11001182-11001609	Cluster_3141	Pocillopora_meandrina_HIv1___Sc0000009	11001182	11001609	428	242	145	0.9752066115702479	+	UCAGAUCUUCCCAUGUACAUUCAUCGA	26	0	230	2	0	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11001701-11002453	Cluster_3142	Pocillopora_meandrina_HIv1___Sc0000009	11001701	11002453	753	1003	331	0.9082751744765702	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	103	9	954	2	7	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11074194-11074669	Cluster_3143	Pocillopora_meandrina_HIv1___Sc0000009	11074194	11074669	476	584	168	0.9965753424657534	+	UUUUUUGAUUUGGCAAAGCUUGAAAUUUCC	179	9	560	2	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11075604-11076017	Cluster_3144	Pocillopora_meandrina_HIv1___Sc0000009	11075604	11076017	414	101	49	0.9900990099009901	+	UGGAUAAAAACGACUGGGAUAAGAUAUAUGC	16	0	97	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11092081-11092708	Cluster_3145	Pocillopora_meandrina_HIv1___Sc0000009	11092081	11092708	628	244	98	0.0	-	UAUUAGUUUUUCCGCUCUUUUGAAGUCU	30	3	239	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11100878-11101287	Cluster_3146	Pocillopora_meandrina_HIv1___Sc0000009	11100878	11101287	410	189	100	0.3915343915343915	.	ACUGGAUACAAAACUGCUCGAUGC	31	1	132	2	2	8	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11101366-11102109	Cluster_3147	Pocillopora_meandrina_HIv1___Sc0000009	11101366	11102109	744	317	153	0.05362776025236593	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	59	1	298	1	1	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11246415-11247187	Cluster_3148	Pocillopora_meandrina_HIv1___Sc0000009	11246415	11247187	773	895	315	0.054748603351955305	-	UCCGUGACACAACGACUUUGCCUUGCUU	109	6	865	3	1	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11247357-11247793	Cluster_3149	Pocillopora_meandrina_HIv1___Sc0000009	11247357	11247793	437	468	200	0.17735042735042736	-	UGACGUUCCAGAAUCUUUGACAAAACAG	34	1	455	0	5	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11248328-11248756	Cluster_3150	Pocillopora_meandrina_HIv1___Sc0000009	11248328	11248756	429	143	56	0.027972027972027972	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	23	1	137	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11353108-11354065	Cluster_3151	Pocillopora_meandrina_HIv1___Sc0000009	11353108	11354065	958	2993	306	0.9859672569328433	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	586	11	2961	2	1	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11391213-11391967	Cluster_3152	Pocillopora_meandrina_HIv1___Sc0000009	11391213	11391967	755	449	251	0.031180400890868598	-	UGGUUUACAGCGUGCUUUGAAGGUUUUAA	21	5	422	1	7	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11392410-11392838	Cluster_3153	Pocillopora_meandrina_HIv1___Sc0000009	11392410	11392838	429	141	58	0.0070921985815602835	-	UGCUCAUAUCUAAUAGGACAACUGCCGUU	40	3	137	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11533128-11533597	Cluster_3154	Pocillopora_meandrina_HIv1___Sc0000009	11533128	11533597	470	542	145	0.992619926199262	+	UUUUUUGAUUUGGCAAAGCUUGAAAUUUCC	161	8	517	5	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11534538-11534954	Cluster_3155	Pocillopora_meandrina_HIv1___Sc0000009	11534538	11534954	417	94	50	1.0	+	UGGAUAAAAACGACUGGGAUAAGAUAUAUGC	14	2	86	0	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11551003-11551632	Cluster_3156	Pocillopora_meandrina_HIv1___Sc0000009	11551003	11551632	630	259	88	0.0	-	UAUUAGUUUUUCCGCUCUUUUGAAGUCU	32	0	258	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11649052-11649873	Cluster_3157	Pocillopora_meandrina_HIv1___Sc0000009	11649052	11649873	822	998	306	0.18837675350701402	-	UGACUUCGUGCCAUCUCUUGUGAUUAUU	125	14	901	5	7	13	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11656065-11657100	Cluster_3158	Pocillopora_meandrina_HIv1___Sc0000009	11656065	11657100	1036	385	123	0.14545454545454545	-	AUGUAGAGUGUCUUUAAGGUCAAC	44	6	287	4	2	21	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11767760-11768545	Cluster_3159	Pocillopora_meandrina_HIv1___Sc0000009	11767760	11768545	786	618	209	0.6035598705501618	.	UGUUAUAUCUGCAUCGGAUGUUAAAGUGC	51	15	563	7	6	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11778166-11778591	Cluster_3160	Pocillopora_meandrina_HIv1___Sc0000009	11778166	11778591	426	210	41	0.0	-	UCCGAUUUAAAAGAUUCUUUGUUUGU	138	1	205	0	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11778872-11779300	Cluster_3161	Pocillopora_meandrina_HIv1___Sc0000009	11778872	11779300	429	270	63	0.025925925925925925	-	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	66	0	266	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11791398-11792259	Cluster_3162	Pocillopora_meandrina_HIv1___Sc0000009	11791398	11792259	862	630	228	0.0380952380952381	-	UGAUGCUGUCGCGUGUACUGCCGAAAAGA	43	5	597	2	0	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11792402-11792830	Cluster_3163	Pocillopora_meandrina_HIv1___Sc0000009	11792402	11792830	429	167	34	0.0	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	86	0	167	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11909906-11910334	Cluster_3164	Pocillopora_meandrina_HIv1___Sc0000009	11909906	11910334	429	149	62	0.9932885906040269	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	42	0	148	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11910487-11911021	Cluster_3165	Pocillopora_meandrina_HIv1___Sc0000009	11910487	11911021	535	734	265	0.997275204359673	+	UAAAUUCGUCUGCAACAGCUUUGUCGC	44	5	715	1	7	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11935729-11936154	Cluster_3166	Pocillopora_meandrina_HIv1___Sc0000009	11935729	11936154	426	431	176	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	38	97	176	18	32	74	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11936361-11936771	Cluster_3167	Pocillopora_meandrina_HIv1___Sc0000009	11936361	11936771	411	187	113	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	42	93	8	15	21	8	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11937947-11938373	Cluster_3168	Pocillopora_meandrina_HIv1___Sc0000009	11937947	11938373	427	444	162	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	26	98	210	12	29	59	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11938579-11939123	Cluster_3169	Pocillopora_meandrina_HIv1___Sc0000009	11938579	11939123	545	233	134	0.9957081545064378	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	59	105	12	17	23	17	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11940165-11940590	Cluster_3170	Pocillopora_meandrina_HIv1___Sc0000009	11940165	11940590	426	416	151	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	25	105	162	19	29	61	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11940797-11941207	Cluster_3171	Pocillopora_meandrina_HIv1___Sc0000009	11940797	11941207	411	219	120	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	19	55	105	14	12	18	15	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11942383-11942808	Cluster_3172	Pocillopora_meandrina_HIv1___Sc0000009	11942383	11942808	426	418	165	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	35	91	178	15	32	66	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11943015-11943425	Cluster_3173	Pocillopora_meandrina_HIv1___Sc0000009	11943015	11943425	411	210	136	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	61	91	11	16	12	19	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11944601-11945027	Cluster_3174	Pocillopora_meandrina_HIv1___Sc0000009	11944601	11945027	427	433	149	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	27	92	192	18	21	59	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11945233-11945780	Cluster_3175	Pocillopora_meandrina_HIv1___Sc0000009	11945233	11945780	548	231	146	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	51	97	19	16	25	23	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11946819-11947244	Cluster_3176	Pocillopora_meandrina_HIv1___Sc0000009	11946819	11947244	426	421	161	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	28	101	191	18	31	51	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11947451-11947861	Cluster_3177	Pocillopora_meandrina_HIv1___Sc0000009	11947451	11947861	411	192	128	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	48	94	6	12	18	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11949037-11949462	Cluster_3178	Pocillopora_meandrina_HIv1___Sc0000009	11949037	11949462	426	419	157	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	22	86	185	18	41	49	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11949669-11950079	Cluster_3179	Pocillopora_meandrina_HIv1___Sc0000009	11949669	11950079	411	227	138	0.9955947136563876	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	16	66	113	6	13	15	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11951255-11951681	Cluster_3180	Pocillopora_meandrina_HIv1___Sc0000009	11951255	11951681	427	411	155	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	35	100	170	19	15	68	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11951887-11952433	Cluster_3181	Pocillopora_meandrina_HIv1___Sc0000009	11951887	11952433	547	245	134	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	52	123	11	24	21	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11953473-11953898	Cluster_3182	Pocillopora_meandrina_HIv1___Sc0000009	11953473	11953898	426	435	156	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	31	121	165	19	34	48	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11954102-11954515	Cluster_3183	Pocillopora_meandrina_HIv1___Sc0000009	11954102	11954515	414	206	124	0.9951456310679612	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	50	112	10	15	14	5	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11955691-11956116	Cluster_3184	Pocillopora_meandrina_HIv1___Sc0000009	11955691	11956116	426	381	160	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	29	81	166	13	25	47	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11956323-11956733	Cluster_3185	Pocillopora_meandrina_HIv1___Sc0000009	11956323	11956733	411	219	136	0.9954337899543378	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	50	95	13	22	17	22	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11957909-11958333	Cluster_3186	Pocillopora_meandrina_HIv1___Sc0000009	11957909	11958333	425	199	99	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	14	49	83	8	14	30	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11958532-11958951	Cluster_3187	Pocillopora_meandrina_HIv1___Sc0000009	11958532	11958951	420	227	129	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	60	107	14	12	19	15	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11961267-11961694	Cluster_3188	Pocillopora_meandrina_HIv1___Sc0000009	11961267	11961694	428	255	145	0.996078431372549	+	UUACCUGACGCGGGAGGUACUGUGAUC	11	119	65	23	21	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11962448-11962873	Cluster_3189	Pocillopora_meandrina_HIv1___Sc0000009	11962448	11962873	426	409	158	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	28	116	156	19	26	51	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11963080-11963489	Cluster_3190	Pocillopora_meandrina_HIv1___Sc0000009	11963080	11963489	410	189	127	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	46	99	10	12	15	7	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11964666-11965091	Cluster_3191	Pocillopora_meandrina_HIv1___Sc0000009	11964666	11965091	426	389	141	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	24	85	160	12	34	57	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11965289-11965708	Cluster_3192	Pocillopora_meandrina_HIv1___Sc0000009	11965289	11965708	420	231	138	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	52	115	13	15	24	12	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11966884-11967309	Cluster_3193	Pocillopora_meandrina_HIv1___Sc0000009	11966884	11967309	426	423	167	0.004728132387706856	-	UGGGAAUACCCCGUGUUGUAGGCUU	31	92	178	22	31	60	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11967516-11967953	Cluster_3194	Pocillopora_meandrina_HIv1___Sc0000009	11967516	11967953	438	230	140	0.9956521739130435	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	66	107	9	15	24	9	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11969102-11969527	Cluster_3195	Pocillopora_meandrina_HIv1___Sc0000009	11969102	11969527	426	404	160	0.0024752475247524753	-	GGAAUACCCCGUGUUGUAGGCUU	30	102	159	11	25	67	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11969734-11970172	Cluster_3196	Pocillopora_meandrina_HIv1___Sc0000009	11969734	11970172	439	222	136	0.990990990990991	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	56	105	12	17	17	15	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11971320-11971745	Cluster_3197	Pocillopora_meandrina_HIv1___Sc0000009	11971320	11971745	426	285	119	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	21	68	118	4	23	47	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11971952-11972362	Cluster_3198	Pocillopora_meandrina_HIv1___Sc0000009	11971952	11972362	411	214	123	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	56	87	11	14	24	22	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11973539-11973963	Cluster_3199	Pocillopora_meandrina_HIv1___Sc0000009	11973539	11973963	425	200	97	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	14	46	75	10	11	32	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11975753-11976178	Cluster_3200	Pocillopora_meandrina_HIv1___Sc0000009	11975753	11976178	426	302	132	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	20	78	114	13	31	43	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11976385-11976947	Cluster_3201	Pocillopora_meandrina_HIv1___Sc0000009	11976385	11976947	563	4914	564	0.9995929995929996	+	CUACCUCCGAGUGCGGCCCACU	448	2033	568	613	1094	541	65	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11977971-11978491	Cluster_3202	Pocillopora_meandrina_HIv1___Sc0000009	11977971	11978491	521	5788	614	0.0003455425017277125	-	GGAAUACCCCGUGUUGUAGGCUU	492	1195	2193	296	456	1011	637	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11978605-11979160	Cluster_3203	Pocillopora_meandrina_HIv1___Sc0000009	11978605	11979160	556	2330	591	0.9978540772532188	+	GUUGCCUCGGUAUAGCACUACCUCCG	223	645	944	113	136	371	121	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11980191-11980608	Cluster_3204	Pocillopora_meandrina_HIv1___Sc0000009	11980191	11980608	418	93	52	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	7	32	45	0	1	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11982404-11982828	Cluster_3205	Pocillopora_meandrina_HIv1___Sc0000009	11982404	11982828	425	225	98	0.0044444444444444444	-	GGAAUACCCCGUGUUGUAGGCUU	23	50	87	6	19	42	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:21012-21425	Cluster_3206	Pocillopora_meandrina_HIv1___Sc0000010	21012	21425	414	184	140	0.8097826086956522	+	UUGCCGUGCGUCUGUUCAG	7	78	31	29	24	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:140324-140751	Cluster_3207	Pocillopora_meandrina_HIv1___Sc0000010	140324	140751	428	187	81	0.9251336898395722	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	72	0	182	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:142508-143192	Cluster_3208	Pocillopora_meandrina_HIv1___Sc0000010	142508	143192	685	445	242	0.7752808988764045	.	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	32	3	378	1	2	12	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:144003-144428	Cluster_3209	Pocillopora_meandrina_HIv1___Sc0000010	144003	144428	426	246	106	0.7723577235772358	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	27	4	220	2	2	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:177177-177603	Cluster_3210	Pocillopora_meandrina_HIv1___Sc0000010	177177	177603	427	243	58	0.9917695473251029	+	UGUUAAUCGAGAGAAGCAUAGACGCAA	63	0	238	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:396319-396725	Cluster_3211	Pocillopora_meandrina_HIv1___Sc0000010	396319	396725	407	113	51	0.7079646017699115	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	27	8	97	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:413540-414064	Cluster_3212	Pocillopora_meandrina_HIv1___Sc0000010	413540	414064	525	663	191	0.049773755656108594	-	UGGGAAAACGAGAACAGCGUGAGUGUUUU	38	3	560	3	4	25	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:414143-414606	Cluster_3213	Pocillopora_meandrina_HIv1___Sc0000010	414143	414606	464	697	107	0.04591104734576758	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	191	114	550	1	4	24	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:414707-415135	Cluster_3214	Pocillopora_meandrina_HIv1___Sc0000010	414707	415135	429	156	52	0.05128205128205128	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	49	1	149	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:683671-684477	Cluster_3215	Pocillopora_meandrina_HIv1___Sc0000010	683671	684477	807	392	175	1.0	+	UGAUCUUGCAGAGCACAAUCAGAUUCUGAU	40	3	374	2	2	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:685197-685956	Cluster_3216	Pocillopora_meandrina_HIv1___Sc0000010	685197	685956	760	4119	655	0.9995144452537024	+	UCAUGAUCACUUAGAGGGUUUGCACUCAUA	469	40	3999	17	34	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:685970-687014	Cluster_3217	Pocillopora_meandrina_HIv1___Sc0000010	685970	687014	1045	2039	330	0.9995095635115253	+	UAUGCAUCGACUUUCACACAGCACUUAGAUU	339	12	1975	10	1	6	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:687962-688391	Cluster_3218	Pocillopora_meandrina_HIv1___Sc0000010	687962	688391	430	407	189	0.9975429975429976	+	UUUUCUUGUAAUUGACUGUCUAGUUUGCCU	26	3	389	2	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:689527-689957	Cluster_3219	Pocillopora_meandrina_HIv1___Sc0000010	689527	689957	431	502	83	1.0	+	UGAAAGGAGAUUUAGUAGACUGAAGGAAUA	95	3	477	2	6	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:690399-690828	Cluster_3220	Pocillopora_meandrina_HIv1___Sc0000010	690399	690828	430	250	65	1.0	+	UACAUGUGUACUGGUAGAGAAAACCCUCC	64	2	245	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:691758-692160	Cluster_3221	Pocillopora_meandrina_HIv1___Sc0000010	691758	692160	403	147	63	1.0	+	UGUUCUAGUCAUUGAAACCUGCAUUUGUU	17	0	144	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:693529-693951	Cluster_3222	Pocillopora_meandrina_HIv1___Sc0000010	693529	693951	423	208	74	0.9903846153846154	+	UGUGUCACGUUCUCAUCUGAAAC	41	0	167	0	0	41	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:697762-698180	Cluster_3223	Pocillopora_meandrina_HIv1___Sc0000010	697762	698180	419	131	56	0.061068702290076333	-	UCUUCCGGUCUGUUUUCGCUUUUUCUGGA	21	5	120	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:713480-713909	Cluster_3224	Pocillopora_meandrina_HIv1___Sc0000010	713480	713909	430	216	79	0.9907407407407407	+	UGCUUCAUUUUGAGCUUCUCUGAUCAUAUC	78	1	210	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:733110-733530	Cluster_3225	Pocillopora_meandrina_HIv1___Sc0000010	733110	733530	421	109	53	0.981651376146789	+	UAUUUCCUUCUCAACUGUCCGUCACCAUG	22	3	101	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:750689-751109	Cluster_3226	Pocillopora_meandrina_HIv1___Sc0000010	750689	751109	421	116	69	0.9913793103448276	+	UGACGUGAAAGUUUCUGGACUUGUUUC	9	1	111	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:751294-751723	Cluster_3227	Pocillopora_meandrina_HIv1___Sc0000010	751294	751723	430	459	113	0.9978213507625272	+	UAUGACGGUACUUUCAAUGGCUUCAGGC	131	7	420	4	9	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:752080-752738	Cluster_3228	Pocillopora_meandrina_HIv1___Sc0000010	752080	752738	659	1687	256	0.995850622406639	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	363	78	1593	3	4	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:755612-756456	Cluster_3229	Pocillopora_meandrina_HIv1___Sc0000010	755612	756456	845	1884	337	0.8381104033970276	+	UAAGUACUGUCGGAGUUGAACCUUUACGGC	685	11	1823	8	9	22	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:761703-762259	Cluster_3230	Pocillopora_meandrina_HIv1___Sc0000010	761703	762259	557	677	168	0.9231905465288035	+	UGAUUAGAAUCGGGAACAACCA	185	9	446	4	188	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:769669-770096	Cluster_3231	Pocillopora_meandrina_HIv1___Sc0000010	769669	770096	428	185	48	1.0	+	UUGGAUCUGUCACUUUCUCGUGAUGCAC	61	3	179	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:789343-789744	Cluster_3232	Pocillopora_meandrina_HIv1___Sc0000010	789343	789744	402	112	65	0.6160714285714286	.	CCAUGUAGUAUCUGCCGAUGGUAUUA	9	0	98	3	6	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:790303-790773	Cluster_3233	Pocillopora_meandrina_HIv1___Sc0000010	790303	790773	471	941	177	0.9606801275239107	+	UAAUCGCAACAGGGAAACUAGACUCCGA	214	7	878	3	4	30	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:794554-795950	Cluster_3234	Pocillopora_meandrina_HIv1___Sc0000010	794554	795950	1397	6351	1455	0.8952920799874036	+	AUCCCACCGCUGCCACCA	259	428	5441	38	34	124	286	N	N	cgr-miR-1260
Pocillopora_meandrina_HIv1___Sc0000010:796194-796604	Cluster_3235	Pocillopora_meandrina_HIv1___Sc0000010	796194	796604	411	164	88	0.6280487804878049	.	GAAGGAAAUAAAGAAGAUGGGGA	7	12	108	7	10	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:797151-797763	Cluster_3236	Pocillopora_meandrina_HIv1___Sc0000010	797151	797763	613	370	119	0.9972972972972973	+	UCGGUACUCUGUUCAAUAAUAUUUCUC	79	2	360	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:801841-803262	Cluster_3237	Pocillopora_meandrina_HIv1___Sc0000010	801841	803262	1422	8262	1202	0.7649479544904382	.	AGAGAUCUUAGAAAACGAUCGUGUGUGCG	555	90	7952	39	32	58	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:804480-805616	Cluster_3238	Pocillopora_meandrina_HIv1___Sc0000010	804480	805616	1137	8484	1498	0.8945073078736445	+	UGAAAGGUACUUUCCGAAUGUUAGCAGAC	639	521	7366	26	101	288	182	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:807657-808356	Cluster_3239	Pocillopora_meandrina_HIv1___Sc0000010	807657	808356	700	576	177	0.8298611111111112	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	115	15	532	2	2	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:820776-821202	Cluster_3240	Pocillopora_meandrina_HIv1___Sc0000010	820776	821202	427	165	57	0.8848484848484849	+	UGAGUACGGGCACUUAAGAGUUUGAUG	29	8	146	0	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:838175-839001	Cluster_3241	Pocillopora_meandrina_HIv1___Sc0000010	838175	839001	827	404	115	0.9925742574257426	+	UAGGACAACUGAGAAUCCACGUAGACUC	95	1	392	2	5	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:842931-843354	Cluster_3242	Pocillopora_meandrina_HIv1___Sc0000010	842931	843354	424	216	122	0.49537037037037035	.	UCUUUUACCAUAUCUAAAACUCCACAUU	16	3	193	1	3	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:843490-844196	Cluster_3243	Pocillopora_meandrina_HIv1___Sc0000010	843490	844196	707	517	241	0.769825918762089	.	UCUUUUGGGUCGUAACUUGAAACAUUCAUA	51	8	472	6	7	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:874558-875361	Cluster_3244	Pocillopora_meandrina_HIv1___Sc0000010	874558	875361	804	16785	507	0.90437890974084	+	UGCUUCAUUUCCCUGACUGUAGUCAGU	3259	38	14963	46	17	49	1672	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:897691-898120	Cluster_3245	Pocillopora_meandrina_HIv1___Sc0000010	897691	898120	430	1556	117	0.9987146529562982	+	UCUUUCGGUCACGUGGGCUUCAAACGCGU	562	6	1543	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:919498-919932	Cluster_3246	Pocillopora_meandrina_HIv1___Sc0000010	919498	919932	435	824	183	0.9648058252427184	+	UAUGACUUAGCUAAUUCCGAUACAUGA	83	4	792	4	4	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:920394-920916	Cluster_3247	Pocillopora_meandrina_HIv1___Sc0000010	920394	920916	523	542	155	0.8837638376383764	+	UCGAACUAACAAUAACCUCCUGCGAUAAAUU	109	17	482	13	0	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:922617-923034	Cluster_3248	Pocillopora_meandrina_HIv1___Sc0000010	922617	923034	418	102	24	0.0784313725490196	-	ACAGAUUGAGAGCUCUUU	71	94	7	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:928313-928865	Cluster_3249	Pocillopora_meandrina_HIv1___Sc0000010	928313	928865	553	394	182	0.9695431472081218	+	UAGGUAAUGGCACAAACUGAGAGGCGU	33	4	373	3	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:929011-931411	Cluster_3250	Pocillopora_meandrina_HIv1___Sc0000010	929011	931411	2401	2626	1158	0.9226961157654227	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	104	25	2438	10	14	44	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1155444-1155861	Cluster_3251	Pocillopora_meandrina_HIv1___Sc0000010	1155444	1155861	418	164	16	0.0	-	UGGCAUGCAAAAAAAAAA	43	162	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1170327-1170748	Cluster_3252	Pocillopora_meandrina_HIv1___Sc0000010	1170327	1170748	422	280	120	0.9964285714285714	+	UAUGAAAUACAUCGGUGGACU	30	81	60	68	38	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1222391-1222817	Cluster_3253	Pocillopora_meandrina_HIv1___Sc0000010	1222391	1222817	427	1074	96	0.0	-	GGGGGCAUAGCUCAGUGGUAGAGCAUU	538	23	904	34	38	12	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1306165-1306587	Cluster_3254	Pocillopora_meandrina_HIv1___Sc0000010	1306165	1306587	423	567	90	0.05114638447971781	-	CUCGCCUCUACUUGACCUCAUUA	151	191	3	148	69	156	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1313084-1314286	Cluster_3255	Pocillopora_meandrina_HIv1___Sc0000010	1313084	1314286	1203	2430	363	0.22674897119341564	.	UAGAGAACGUUGCUGACACUGAAUGGUC	548	7	2387	1	6	5	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1335014-1335439	Cluster_3256	Pocillopora_meandrina_HIv1___Sc0000010	1335014	1335439	426	99	37	0.9696969696969697	+	CCUCGAGACUGUAAGGAGAGAGACGU	20	10	78	1	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1837449-1838066	Cluster_3257	Pocillopora_meandrina_HIv1___Sc0000010	1837449	1838066	618	269	128	0.007434944237918215	-	UGCUCAUAUCUAAUAGGACAACUGCCGUU	37	3	258	1	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1847194-1847623	Cluster_3258	Pocillopora_meandrina_HIv1___Sc0000010	1847194	1847623	430	259	94	0.9266409266409267	+	UGUUUCAACUCUUGAAUGAUUCUUGCUU	26	0	248	1	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2209255-2209672	Cluster_3259	Pocillopora_meandrina_HIv1___Sc0000010	2209255	2209672	418	144	93	0.4513888888888889	.	UUACUGAACAGACGCACGGC	17	91	16	18	10	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2415327-2415757	Cluster_3260	Pocillopora_meandrina_HIv1___Sc0000010	2415327	2415757	431	243	37	0.9876543209876543	+	AGAGACUCGUCCAAAAUUACUCCUAAGUAUU	75	5	233	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2417991-2418411	Cluster_3261	Pocillopora_meandrina_HIv1___Sc0000010	2417991	2418411	421	142	72	0.9788732394366197	+	UGAUCUUCUGUUUUAUAUUUGAGCCAGC	22	0	138	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2427912-2428317	Cluster_3262	Pocillopora_meandrina_HIv1___Sc0000010	2427912	2428317	406	189	134	0.8571428571428571	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	11	0	174	2	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2428422-2428841	Cluster_3263	Pocillopora_meandrina_HIv1___Sc0000010	2428422	2428841	420	297	193	0.9191919191919192	+	UCAGACACGUGGAUACUUGCGAUGAAGU	21	3	268	1	4	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2429196-2429618	Cluster_3264	Pocillopora_meandrina_HIv1___Sc0000010	2429196	2429618	423	237	117	0.9156118143459916	+	UCUACGUCUAUCAACCAGGAAUGAAACUCGU	21	5	218	0	0	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2430352-2430779	Cluster_3265	Pocillopora_meandrina_HIv1___Sc0000010	2430352	2430779	428	182	50	0.7087912087912088	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	30	2	144	1	2	2	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2441809-2442566	Cluster_3266	Pocillopora_meandrina_HIv1___Sc0000010	2441809	2442566	758	1660	290	0.8927710843373494	+	UGUGUCUGUUGUGCAAUUGGGGAGCACU	173	10	1516	5	79	16	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2449123-2450126	Cluster_3267	Pocillopora_meandrina_HIv1___Sc0000010	2449123	2450126	1004	2297	452	0.9290378754897692	+	UGUUUGAUCCAAUUCAGGAUACUUUGGCG	293	23	2166	0	4	49	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2450219-2451571	Cluster_3268	Pocillopora_meandrina_HIv1___Sc0000010	2450219	2451571	1353	2823	649	0.9829968119022316	+	UCCAUGGCUCUUGUGUGCUUGUUGCAUA	397	36	2710	4	14	9	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2455281-2455708	Cluster_3269	Pocillopora_meandrina_HIv1___Sc0000010	2455281	2455708	428	309	107	0.941747572815534	+	UGCAAGCUUCUCAUUAUUCGGCAGGACU	40	4	291	2	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2455924-2456774	Cluster_3270	Pocillopora_meandrina_HIv1___Sc0000010	2455924	2456774	851	2570	344	0.998443579766537	+	UACUUCCUGUCACUGGACUGAUGAUGCC	654	17	2523	6	6	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2456983-2458012	Cluster_3271	Pocillopora_meandrina_HIv1___Sc0000010	2456983	2458012	1030	2326	417	0.9419604471195185	+	UCAGCAAACUGUUGGAAAUGCAUGCCAUC	649	24	2208	2	37	27	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2461299-2461709	Cluster_3272	Pocillopora_meandrina_HIv1___Sc0000010	2461299	2461709	411	216	120	0.9351851851851852	+	UAGGAAAUGGCGUCCAGUAAGUCUUAGA	16	2	199	3	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2461732-2462161	Cluster_3273	Pocillopora_meandrina_HIv1___Sc0000010	2461732	2462161	430	331	167	0.8459214501510574	+	UAUUCUCAACAGUACUCAAAAAGGUAACACG	27	3	292	4	5	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2462681-2463362	Cluster_3274	Pocillopora_meandrina_HIv1___Sc0000010	2462681	2463362	682	267	147	0.9063670411985019	+	UGACAUGUCGAAACCCGUAAUCUAAAGU	27	3	247	5	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2463754-2464730	Cluster_3275	Pocillopora_meandrina_HIv1___Sc0000010	2463754	2464730	977	1097	270	0.9343664539653601	+	UUAACUCCGAUCCGAUGACCUAGAAAGU	150	2	1051	0	4	13	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2464979-2465579	Cluster_3276	Pocillopora_meandrina_HIv1___Sc0000010	2464979	2465579	601	1098	381	0.7067395264116576	.	UAUAUAUCCUCUGUGAUUGUCUGAUCAC	65	18	915	55	30	23	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2465837-2466345	Cluster_3277	Pocillopora_meandrina_HIv1___Sc0000010	2465837	2466345	509	791	316	0.7673830594184576	.	UCUGAUUGCAUAUACCUGUGAAACUUGU	109	11	701	10	4	22	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2466427-2467882	Cluster_3278	Pocillopora_meandrina_HIv1___Sc0000010	2466427	2467882	1456	5717	1110	0.9525975161798146	+	UAGGAGAUGUGUCUUUCCAGGCUCGAAA	867	27	5430	15	25	43	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2469759-2470188	Cluster_3279	Pocillopora_meandrina_HIv1___Sc0000010	2469759	2470188	430	106	20	1.0	+	UGAAAACUGCACUCAACCAAAACUUUGAGC	62	0	105	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2478732-2479157	Cluster_3280	Pocillopora_meandrina_HIv1___Sc0000010	2478732	2479157	426	120	54	0.4083333333333333	.	UACUUGUCUAUCCUGGACCACCGGAACA	38	3	113	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2479632-2480805	Cluster_3281	Pocillopora_meandrina_HIv1___Sc0000010	2479632	2480805	1174	3658	778	0.9611809732094041	+	UGAAUACUUAAGGGUCGGUCAGGCUGAUA	589	27	3451	25	40	48	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2480915-2481760	Cluster_3282	Pocillopora_meandrina_HIv1___Sc0000010	2480915	2481760	846	8701	770	0.9896563613377772	+	UGAGAUAUGUAUUCUUCUUCGAGGCAGA	2950	17	8516	44	9	26	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2482829-2483305	Cluster_3283	Pocillopora_meandrina_HIv1___Sc0000010	2482829	2483305	477	328	142	0.9390243902439024	+	UGAUUUAGAAAUAAGAAAUGAUUCU	21	3	318	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2497239-2498165	Cluster_3284	Pocillopora_meandrina_HIv1___Sc0000010	2497239	2498165	927	3031	599	0.9660178159023425	+	UGAUGAUCGUUGACGGGAGAAAACUCACA	206	31	2910	18	14	23	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2498258-2499133	Cluster_3285	Pocillopora_meandrina_HIv1___Sc0000010	2498258	2499133	876	2830	648	0.9547703180212014	+	UGAACAUGUAGGAAACUGACUUUUGGUC	460	16	2683	9	15	28	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2499159-2501194	Cluster_3286	Pocillopora_meandrina_HIv1___Sc0000010	2499159	2501194	2036	5141	1576	0.8854308500291772	+	UAUUCGUCUAGAGUUUCACCAACCUGU	381	86	4790	37	24	76	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2506868-2507293	Cluster_3287	Pocillopora_meandrina_HIv1___Sc0000010	2506868	2507293	426	160	90	0.93125	+	UCGGUUAUCAUUACUAUUUGCAUCUUCAUC	17	5	147	4	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2514789-2515216	Cluster_3288	Pocillopora_meandrina_HIv1___Sc0000010	2514789	2515216	428	107	13	0.9813084112149533	+	UAACCCGAGAACUGACACGUGAGUAGUC	73	1	93	0	2	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2519340-2519763	Cluster_3289	Pocillopora_meandrina_HIv1___Sc0000010	2519340	2519763	424	83	10	0.9759036144578314	+	UAACCCGAGAACUGACACGUGAGUAGUC	54	0	72	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2522763-2523192	Cluster_3290	Pocillopora_meandrina_HIv1___Sc0000010	2522763	2523192	430	179	29	1.0	+	UGACUUGCACAGCUUCUUGAAAUAAACAGG	50	0	170	0	0	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2536734-2537162	Cluster_3291	Pocillopora_meandrina_HIv1___Sc0000010	2536734	2537162	429	128	23	0.984375	+	UAUUCCAACCGAUCUACUAAUUUUGUGAC	59	0	127	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2537629-2538056	Cluster_3292	Pocillopora_meandrina_HIv1___Sc0000010	2537629	2538056	428	110	23	0.990909090909091	+	AACGUGCUACUGAUUCUGGUGAAGACAUUC	38	1	99	0	10	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2564845-2565267	Cluster_3293	Pocillopora_meandrina_HIv1___Sc0000010	2564845	2565267	423	126	49	0.9920634920634921	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	18	2	119	2	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2565790-2566238	Cluster_3294	Pocillopora_meandrina_HIv1___Sc0000010	2565790	2566238	449	471	197	0.8152866242038217	+	UAUGACGUUCCAGAAUCUUUGACAAAA	52	4	445	6	5	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2566408-2567145	Cluster_3295	Pocillopora_meandrina_HIv1___Sc0000010	2566408	2567145	738	818	287	0.9437652811735942	+	UCCGUGACACAACGACUUUGCCUUGCUU	99	9	798	1	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2571020-2571648	Cluster_3296	Pocillopora_meandrina_HIv1___Sc0000010	2571020	2571648	629	1901	201	0.9968437664387164	+	UGAUUGGUGCAUUUCGAUCCUUGCUGU	748	5	1883	2	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2602291-2602714	Cluster_3297	Pocillopora_meandrina_HIv1___Sc0000010	2602291	2602714	424	80	17	0.9375	+	AGCAUGACGAAGGUUAGAGAUCGAC	37	1	52	0	1	1	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3002204-3002627	Cluster_3298	Pocillopora_meandrina_HIv1___Sc0000010	3002204	3002627	424	115	47	0.9130434782608695	+	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	19	3	106	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3008210-3008649	Cluster_3299	Pocillopora_meandrina_HIv1___Sc0000010	3008210	3008649	440	857	161	0.049008168028004666	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	206	1	838	0	5	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3150263-3150692	Cluster_3300	Pocillopora_meandrina_HIv1___Sc0000010	3150263	3150692	430	275	146	0.16	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	26	2	254	2	2	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3151922-3152625	Cluster_3301	Pocillopora_meandrina_HIv1___Sc0000010	3151922	3152625	704	282	137	0.04609929078014184	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	24	0	271	2	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3204118-3204630	Cluster_3302	Pocillopora_meandrina_HIv1___Sc0000010	3204118	3204630	513	200	81	0.02	-	CUAGUACAAACAACGAUCGAGUGGCCAUU	27	4	156	10	3	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3204711-3205723	Cluster_3303	Pocillopora_meandrina_HIv1___Sc0000010	3204711	3205723	1013	1646	289	0.14823815309842042	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	218	156	1434	6	4	33	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3227600-3228005	Cluster_3304	Pocillopora_meandrina_HIv1___Sc0000010	3227600	3228005	406	149	62	0.12751677852348994	-	UCGUUUAGAUCAGAUAUCACCUCAACU	10	2	137	1	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3263500-3263918	Cluster_3305	Pocillopora_meandrina_HIv1___Sc0000010	3263500	3263918	419	169	103	0.011834319526627219	-	AGAAAGCUCUGAGGAACACU	10	53	52	11	24	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3368202-3369096	Cluster_3306	Pocillopora_meandrina_HIv1___Sc0000010	3368202	3369096	895	564	168	0.18085106382978725	-	UUUCAAACUAAGGAAGGAGAAAGGGAUA	117	9	435	11	6	14	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3369868-3370294	Cluster_3307	Pocillopora_meandrina_HIv1___Sc0000010	3369868	3370294	427	563	71	0.0017761989342806395	-	UGAAGAUGGAAUCAAGAAAUGCAAAAC	332	10	490	3	31	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3374263-3374687	Cluster_3308	Pocillopora_meandrina_HIv1___Sc0000010	3374263	3374687	425	174	82	0.005747126436781609	-	GAUUCUGGUAGCGUUUUUAAGUGCGA	20	10	141	2	3	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3388834-3389259	Cluster_3309	Pocillopora_meandrina_HIv1___Sc0000010	3388834	3389259	426	336	157	0.34523809523809523	.	UUAAAAAGACGAGCUCGACA	19	200	0	116	12	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3398303-3399259	Cluster_3310	Pocillopora_meandrina_HIv1___Sc0000010	3398303	3399259	957	595	182	0.06218487394957983	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	75	8	561	0	2	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3411199-3411966	Cluster_3311	Pocillopora_meandrina_HIv1___Sc0000010	3411199	3411966	768	698	120	0.998567335243553	+	UGCAAAAUCGACUCCGAUAACCUCAAAUGG	194	1	694	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3413715-3414157	Cluster_3312	Pocillopora_meandrina_HIv1___Sc0000010	3413715	3414157	443	256	123	0.97265625	+	UCAUCUACAGUCGCAGUUUCAACUUCUAGU	25	2	246	0	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3414708-3415123	Cluster_3313	Pocillopora_meandrina_HIv1___Sc0000010	3414708	3415123	416	91	44	0.8571428571428571	+	UGUAUUCUGCUACUGGUUCUCCCGAGC	28	4	82	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3415285-3416188	Cluster_3314	Pocillopora_meandrina_HIv1___Sc0000010	3415285	3416188	904	1056	309	0.9289772727272727	+	UUGGCGUAGUUUCGUUUGCGUGAAAUGUU	147	7	1013	6	6	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3416831-3417254	Cluster_3315	Pocillopora_meandrina_HIv1___Sc0000010	3416831	3417254	424	82	32	0.0	-	AUUGAAAACGAUCUCGGGCGCCCAGAACA	19	0	79	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3644374-3644993	Cluster_3316	Pocillopora_meandrina_HIv1___Sc0000010	3644374	3644993	620	338	133	0.029585798816568046	-	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	55	1	329	1	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3658432-3658849	Cluster_3317	Pocillopora_meandrina_HIv1___Sc0000010	3658432	3658849	418	156	14	0.9358974358974359	+	CUUUCUGGAGUUAAGGUU	133	147	6	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3676348-3676967	Cluster_3318	Pocillopora_meandrina_HIv1___Sc0000010	3676348	3676967	620	333	144	0.02702702702702703	-	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	58	2	327	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3698787-3699194	Cluster_3319	Pocillopora_meandrina_HIv1___Sc0000010	3698787	3699194	408	121	67	0.8099173553719008	+	AAUACCCACAAAGAUUCAGAAACAUUUAUU	6	1	112	1	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3747752-3748577	Cluster_3320	Pocillopora_meandrina_HIv1___Sc0000010	3747752	3748577	826	2639	660	0.8548692686623721	+	UUAUCAACAGUACGGUUUGACUUGAAUC	278	30	2487	12	29	19	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3940413-3940841	Cluster_3321	Pocillopora_meandrina_HIv1___Sc0000010	3940413	3940841	429	150	27	1.0	+	UGAGUCAAGAUUUGCUUCCACCUGAAGGC	61	1	145	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4088544-4088984	Cluster_3322	Pocillopora_meandrina_HIv1___Sc0000010	4088544	4088984	441	2413	196	0.9875673435557397	+	UGCUGAAAAUCUGGACUUCUCGUAGAGC	654	3	2341	0	0	58	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4250287-4250716	Cluster_3323	Pocillopora_meandrina_HIv1___Sc0000010	4250287	4250716	430	89	26	0.9550561797752809	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	30	0	88	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4358728-4359428	Cluster_3324	Pocillopora_meandrina_HIv1___Sc0000010	4358728	4359428	701	648	210	0.8271604938271605	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	114	21	594	2	3	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4359765-4360175	Cluster_3325	Pocillopora_meandrina_HIv1___Sc0000010	4359765	4360175	411	219	126	0.8949771689497716	+	UAGAGACUUUAAGUACUGGAAAUACUUA	18	3	192	10	3	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4480457-4481231	Cluster_3326	Pocillopora_meandrina_HIv1___Sc0000010	4480457	4481231	775	1307	240	0.3481254781943382	.	UCACCAUGAAAAGACUCUGGGCCAAAG	150	5	1236	2	5	13	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4481708-4482147	Cluster_3327	Pocillopora_meandrina_HIv1___Sc0000010	4481708	4482147	440	266	44	0.30451127819548873	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	87	9	247	6	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4482895-4483325	Cluster_3328	Pocillopora_meandrina_HIv1___Sc0000010	4482895	4483325	431	1513	147	0.9689358889623265	+	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	424	4	1490	6	5	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4483687-4484591	Cluster_3329	Pocillopora_meandrina_HIv1___Sc0000010	4483687	4484591	905	1478	314	0.70297699594046	.	UAAGGAAAGUCUUUUCUGGGGUCUCCAAA	328	10	1396	9	15	12	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4573143-4573569	Cluster_3330	Pocillopora_meandrina_HIv1___Sc0000010	4573143	4573569	427	135	59	0.9851851851851852	+	UAGAAUCUCUUCACCUAUAUGCAUCAU	31	0	135	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4573624-4575017	Cluster_3331	Pocillopora_meandrina_HIv1___Sc0000010	4573624	4575017	1394	5668	858	0.795165843330981	.	UACUUGUCGAAGUCCUGGCCCUCUAGCC	665	39	4714	21	74	429	391	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5041259-5041677	Cluster_3332	Pocillopora_meandrina_HIv1___Sc0000010	5041259	5041677	419	81	27	0.0	-	UGUAGAACUGUCCGCCCAG	15	45	11	17	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5046153-5046580	Cluster_3333	Pocillopora_meandrina_HIv1___Sc0000010	5046153	5046580	428	514	115	0.9357976653696498	+	UCGACGUCGAUAUCAACAUUCUUAAUGU	231	2	497	0	1	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5080307-5080730	Cluster_3334	Pocillopora_meandrina_HIv1___Sc0000010	5080307	5080730	424	131	61	1.0	+	UGCACUACACAGCCUCAGACAUUG	12	12	80	3	5	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5112513-5112980	Cluster_3335	Pocillopora_meandrina_HIv1___Sc0000010	5112513	5112980	468	308	218	1.0	+	GACGAAAGAAAGUUGUGGACGCA	6	97	103	22	27	34	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5121116-5121530	Cluster_3336	Pocillopora_meandrina_HIv1___Sc0000010	5121116	5121530	415	233	170	1.0	+	UGAUAACAUAAUCUGCGGCAUCACCUCUGU	11	51	120	15	13	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5169129-5169549	Cluster_3337	Pocillopora_meandrina_HIv1___Sc0000010	5169129	5169549	421	85	26	1.0	+	UGCCAGACCUCUUACAAACCUCU	26	6	2	8	17	49	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5184027-5184454	Cluster_3338	Pocillopora_meandrina_HIv1___Sc0000010	5184027	5184454	428	198	79	0.015151515151515152	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	33	3	184	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5215689-5216108	Cluster_3339	Pocillopora_meandrina_HIv1___Sc0000010	5215689	5216108	420	185	119	0.0	-	ACGGAAAAGUCUGACACUGA	12	54	71	15	14	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5218837-5219246	Cluster_3340	Pocillopora_meandrina_HIv1___Sc0000010	5218837	5219246	410	179	131	0.0	-	GGUGAUUGCUGACGGCUGUGCU	6	37	66	21	24	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5386985-5387412	Cluster_3341	Pocillopora_meandrina_HIv1___Sc0000010	5386985	5387412	428	91	15	0.02197802197802198	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	1	90	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5454682-5455264	Cluster_3342	Pocillopora_meandrina_HIv1___Sc0000010	5454682	5455264	583	3341	410	0.42532175995211013	.	UGUAUGGCAAAGUUCUAAUAUUAAAAAAUU	669	21	2114	136	30	287	753	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5456217-5456935	Cluster_3343	Pocillopora_meandrina_HIv1___Sc0000010	5456217	5456935	719	421	155	0.7814726840855107	.	UGAUGCAAUCUGUUUCUGCAUGAGGGC	44	3	370	3	10	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5463919-5464391	Cluster_3344	Pocillopora_meandrina_HIv1___Sc0000010	5463919	5464391	473	226	116	0.6371681415929203	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	19	1	204	5	3	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5464715-5465144	Cluster_3345	Pocillopora_meandrina_HIv1___Sc0000010	5464715	5465144	430	115	37	0.9304347826086956	+	AGUUGACAUAUUGACUGGUACAAACAAGGA	67	5	106	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5487259-5487685	Cluster_3346	Pocillopora_meandrina_HIv1___Sc0000010	5487259	5487685	427	297	33	0.9831649831649831	+	GUCCGUCCUAAAGGAAACCCCUGCAA	109	4	283	3	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5840138-5840633	Cluster_3347	Pocillopora_meandrina_HIv1___Sc0000010	5840138	5840633	496	582	72	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	92	0	580	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5846252-5846678	Cluster_3348	Pocillopora_meandrina_HIv1___Sc0000010	5846252	5846678	427	215	39	0.09302325581395349	-	AGGGACUGAAACAUCGACUGAAGACG	54	2	185	8	0	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5905579-5906074	Cluster_3349	Pocillopora_meandrina_HIv1___Sc0000010	5905579	5906074	496	531	90	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	86	0	524	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5952667-5953092	Cluster_3350	Pocillopora_meandrina_HIv1___Sc0000010	5952667	5953092	426	145	39	0.034482758620689655	-	UCUUGCUUUGGGCUAAUGAUAAGACAU	33	1	101	17	3	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6015149-6015576	Cluster_3351	Pocillopora_meandrina_HIv1___Sc0000010	6015149	6015576	428	160	50	0.9	+	UUAGAGAAUGCAAACCCAAUUUGGACGG	38	2	141	1	7	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6072176-6072604	Cluster_3352	Pocillopora_meandrina_HIv1___Sc0000010	6072176	6072604	429	363	57	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	89	0	362	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6130485-6130913	Cluster_3353	Pocillopora_meandrina_HIv1___Sc0000010	6130485	6130913	429	385	55	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	86	0	383	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6186986-6187481	Cluster_3354	Pocillopora_meandrina_HIv1___Sc0000010	6186986	6187481	496	517	73	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	83	2	515	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6239131-6239626	Cluster_3355	Pocillopora_meandrina_HIv1___Sc0000010	6239131	6239626	496	597	68	0.0	-	CGUUACUGUUUGUCUGUAAGGGACGUGAU	86	0	597	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6359214-6359709	Cluster_3356	Pocillopora_meandrina_HIv1___Sc0000010	6359214	6359709	496	425	65	0.0	-	UCUUGCUUUGGGCUAAUGUUAAGACGUGU	61	4	416	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6433080-6433718	Cluster_3357	Pocillopora_meandrina_HIv1___Sc0000010	6433080	6433718	639	565	294	0.12389380530973451	-	UAAUGCUUAGUAAUGUCGACACACGAACUA	30	9	530	3	8	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6434362-6434829	Cluster_3358	Pocillopora_meandrina_HIv1___Sc0000010	6434362	6434829	468	261	129	0.16475095785440613	-	UGCGUACUUUGUUUGGCUUCACUAUGGC	29	3	232	1	5	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6435309-6435744	Cluster_3359	Pocillopora_meandrina_HIv1___Sc0000010	6435309	6435744	436	390	126	0.015384615384615385	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	53	0	383	2	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6435818-6436245	Cluster_3360	Pocillopora_meandrina_HIv1___Sc0000010	6435818	6436245	428	179	79	0.055865921787709494	-	UAUGUGAUCGGUGAAUUUGCUUCAACA	27	0	171	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6436834-6437251	Cluster_3361	Pocillopora_meandrina_HIv1___Sc0000010	6436834	6437251	418	116	67	0.034482758620689655	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	14	0	111	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6468262-6468688	Cluster_3362	Pocillopora_meandrina_HIv1___Sc0000010	6468262	6468688	427	196	107	0.14285714285714285	-	AGUUGACAUAUGGACUGGUACAAACAAGGG	12	11	132	11	10	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6504286-6504781	Cluster_3363	Pocillopora_meandrina_HIv1___Sc0000010	6504286	6504781	496	506	72	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	81	1	501	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6531965-6533590	Cluster_3364	Pocillopora_meandrina_HIv1___Sc0000010	6531965	6533590	1626	4608	1048	0.7495659722222222	.	UAAUGUGAAUUUUUGGAUCAUUGGUUGUG	177	38	4089	76	38	119	248	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6564274-6564702	Cluster_3365	Pocillopora_meandrina_HIv1___Sc0000010	6564274	6564702	429	398	52	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	96	1	396	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6635003-6635431	Cluster_3366	Pocillopora_meandrina_HIv1___Sc0000010	6635003	6635431	429	398	58	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	88	0	396	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6696554-6697112	Cluster_3367	Pocillopora_meandrina_HIv1___Sc0000010	6696554	6697112	559	589	99	0.9796264855687606	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	161	0	579	2	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6735763-6736193	Cluster_3368	Pocillopora_meandrina_HIv1___Sc0000010	6735763	6736193	431	240	53	0.05416666666666667	-	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	43	0	230	2	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6740567-6740994	Cluster_3369	Pocillopora_meandrina_HIv1___Sc0000010	6740567	6740994	428	174	63	0.10344827586206896	-	ACAAGCGAUAUGUGGACCUUGAUCUGCGA	31	0	169	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6741198-6741626	Cluster_3370	Pocillopora_meandrina_HIv1___Sc0000010	6741198	6741626	429	195	63	0.02564102564102564	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	56	0	176	0	2	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6796012-6796440	Cluster_3371	Pocillopora_meandrina_HIv1___Sc0000010	6796012	6796440	429	364	36	0.9945054945054945	+	AGUGACUGAAAAAAAAAAAAAAAAAA	49	15	281	7	18	23	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6844842-6845267	Cluster_3372	Pocillopora_meandrina_HIv1___Sc0000010	6844842	6845267	426	98	46	0.9897959183673469	+	UGUGUAGAUAUGUCUUUUGGACAGGA	24	0	96	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6904352-6904756	Cluster_3373	Pocillopora_meandrina_HIv1___Sc0000010	6904352	6904756	405	71	31	0.9436619718309859	+	UCCGAUCAAGCAGGAUUCAGUUUCUUGGA	13	3	66	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6995127-6995546	Cluster_3374	Pocillopora_meandrina_HIv1___Sc0000010	6995127	6995546	420	2500	89	0.0004	-	GUAGUCGUGGCCGAGUGG	1269	2440	9	19	7	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7063587-7064016	Cluster_3375	Pocillopora_meandrina_HIv1___Sc0000010	7063587	7064016	430	283	93	0.0353356890459364	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGC	27	0	264	0	5	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7067135-7067630	Cluster_3376	Pocillopora_meandrina_HIv1___Sc0000010	7067135	7067630	496	469	68	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	79	2	462	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7121699-7122127	Cluster_3377	Pocillopora_meandrina_HIv1___Sc0000010	7121699	7122127	429	409	70	0.9975550122249389	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	90	0	404	2	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7141151-7141552	Cluster_3378	Pocillopora_meandrina_HIv1___Sc0000010	7141151	7141552	402	238	143	0.15966386554621848	-	UGGAAAUACUUAAAGGAGAUAAGACGUU	12	2	211	2	7	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7141815-7142786	Cluster_3379	Pocillopora_meandrina_HIv1___Sc0000010	7141815	7142786	972	865	342	0.1976878612716763	-	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	113	20	777	5	7	22	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7181896-7182334	Cluster_3380	Pocillopora_meandrina_HIv1___Sc0000010	7181896	7182334	439	972	131	0.030864197530864196	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGU	317	3	943	2	12	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7188769-7189197	Cluster_3381	Pocillopora_meandrina_HIv1___Sc0000010	7188769	7189197	429	331	61	0.015105740181268883	-	UAGGACAACUGAGAAUCCACGUAGACUC	125	1	324	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7190894-7191322	Cluster_3382	Pocillopora_meandrina_HIv1___Sc0000010	7190894	7191322	429	357	45	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	90	0	357	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7239251-7239778	Cluster_3383	Pocillopora_meandrina_HIv1___Sc0000010	7239251	7239778	528	812	207	0.09482758620689655	-	UGAUAUAAAUGACAAAAAGUAAAGGGC	216	17	732	7	8	27	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7239838-7240267	Cluster_3384	Pocillopora_meandrina_HIv1___Sc0000010	7239838	7240267	430	141	47	0.014184397163120567	-	UGAAUAGCAUAACUGAUGAACUACGUG	26	0	139	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7258053-7258481	Cluster_3385	Pocillopora_meandrina_HIv1___Sc0000010	7258053	7258481	429	386	47	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	84	0	386	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7364532-7364960	Cluster_3386	Pocillopora_meandrina_HIv1___Sc0000010	7364532	7364960	429	371	50	0.9973045822102425	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	84	1	368	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7435837-7436265	Cluster_3387	Pocillopora_meandrina_HIv1___Sc0000010	7435837	7436265	429	429	62	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	83	0	428	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7460500-7462676	Cluster_3388	Pocillopora_meandrina_HIv1___Sc0000010	7460500	7462676	2177	2330	897	0.9583690987124464	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	97	26	2150	11	13	76	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7463684-7464725	Cluster_3389	Pocillopora_meandrina_HIv1___Sc0000010	7463684	7464725	1042	4155	788	0.9855595667870036	+	UCUGUCUGUAUUGUUUUGGACCACGAC	929	29	4029	19	13	33	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7464863-7466466	Cluster_3390	Pocillopora_meandrina_HIv1___Sc0000010	7464863	7466466	1604	1668	772	0.8758992805755396	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	103	19	1512	5	12	29	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7500043-7500465	Cluster_3391	Pocillopora_meandrina_HIv1___Sc0000010	7500043	7500465	423	212	59	0.6556603773584906	.	CAAGUUGUAAAUUAUGGGUCGUG	66	3	116	0	3	67	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7535101-7535529	Cluster_3392	Pocillopora_meandrina_HIv1___Sc0000010	7535101	7535529	429	443	73	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	96	0	441	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7597296-7597855	Cluster_3393	Pocillopora_meandrina_HIv1___Sc0000010	7597296	7597855	560	941	137	0.025504782146652496	-	UGCAAACCCAAUUUGGACGGUUCAACUCC	306	2	928	1	6	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7604154-7604584	Cluster_3394	Pocillopora_meandrina_HIv1___Sc0000010	7604154	7604584	431	2991	129	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	506	0	2987	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7665815-7666243	Cluster_3395	Pocillopora_meandrina_HIv1___Sc0000010	7665815	7666243	429	378	42	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	94	0	378	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7738519-7738947	Cluster_3396	Pocillopora_meandrina_HIv1___Sc0000010	7738519	7738947	429	384	60	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	93	0	383	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7900802-7901231	Cluster_3397	Pocillopora_meandrina_HIv1___Sc0000010	7900802	7901231	430	980	94	0.9979591836734694	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUA	564	4	891	2	8	7	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8008738-8009160	Cluster_3398	Pocillopora_meandrina_HIv1___Sc0000010	8008738	8009160	423	1086	78	0.9604051565377533	+	UACUUAAAUGUUAUUGGUUUGU	359	6	43	0	574	437	26	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8010736-8011158	Cluster_3399	Pocillopora_meandrina_HIv1___Sc0000010	8010736	8011158	423	1730	94	0.9734104046242774	+	UACUUAAAUGUUAUUGGUUUGU	568	19	50	4	909	711	37	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8012916-8013008	Cluster_3400	Pocillopora_meandrina_HIv1___Sc0000010	8012916	8013008	93	26677	314	0.9906286314053304	+	UACUUCAAUGUUAUCGGUUUGU	7987	404	130	142	12956	11855	1190	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000010:8076458-8077345	Cluster_3401	Pocillopora_meandrina_HIv1___Sc0000010	8076458	8077345	888	1590	334	0.3062893081761006	.	UUGUUACAAUGGAAUUCUCAUCUUCUAG	165	14	1508	7	3	27	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8149899-8150308	Cluster_3402	Pocillopora_meandrina_HIv1___Sc0000010	8149899	8150308	410	190	120	0.9210526315789473	+	UAUUCCAAGAUUGGCCGUACCAGAGACA	16	2	173	2	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8262785-8263213	Cluster_3403	Pocillopora_meandrina_HIv1___Sc0000010	8262785	8263213	429	105	35	0.22857142857142856	.	UGCUUUGGACGAAAUUUCGAGGUUCACACU	52	8	78	13	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8395007-8395433	Cluster_3404	Pocillopora_meandrina_HIv1___Sc0000010	8395007	8395433	427	212	127	0.75	.	UUCUGAUCCGACGAAUAUUAUAAAUGUAGU	9	1	200	1	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8396951-8397379	Cluster_3405	Pocillopora_meandrina_HIv1___Sc0000010	8396951	8397379	429	240	125	0.06666666666666667	-	UUAUUGACGAAUUUUCUGAGUACCUUGA	15	0	227	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8397442-8397884	Cluster_3406	Pocillopora_meandrina_HIv1___Sc0000010	8397442	8397884	443	428	212	0.2266355140186916	.	UGCUCGCUCUAUUUCAAACAAAUCUGCACU	25	11	361	4	5	19	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8565037-8565455	Cluster_3407	Pocillopora_meandrina_HIv1___Sc0000010	8565037	8565455	419	155	61	0.0	-	GCGUUGGUGGUAUAGUGGU	54	121	20	4	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8566513-8566931	Cluster_3408	Pocillopora_meandrina_HIv1___Sc0000010	8566513	8566931	419	261	64	0.0038314176245210726	-	GCGUUGGUGGUAUAGUGGU	96	201	43	10	6	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8583892-8584344	Cluster_3409	Pocillopora_meandrina_HIv1___Sc0000010	8583892	8584344	453	332	197	0.45180722891566266	.	UUAACGGCUGUGUAGGAUAGAAUCGUCAACC	18	131	93	81	17	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8672504-8672930	Cluster_3410	Pocillopora_meandrina_HIv1___Sc0000010	8672504	8672930	427	192	27	0.005208333333333333	-	AUGCAUUGCCGAUAUUUACUUUAUUUG	94	1	180	2	7	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8752679-8753159	Cluster_3411	Pocillopora_meandrina_HIv1___Sc0000010	8752679	8753159	481	548	126	0.10036496350364964	-	AAGUUUUCCAACGACUCGUUUCUCUGCG	174	0	510	0	1	12	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8886490-8887042	Cluster_3412	Pocillopora_meandrina_HIv1___Sc0000010	8886490	8887042	553	709	288	0.009873060648801129	-	UGGCUGAGCUUCGCGUGUUU	37	183	228	104	59	73	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8891665-8892085	Cluster_3413	Pocillopora_meandrina_HIv1___Sc0000010	8891665	8892085	421	262	113	0.6183206106870229	.	AUUGUGCACCGUGUACCCUCU	42	100	15	118	19	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8902782-8903325	Cluster_3414	Pocillopora_meandrina_HIv1___Sc0000010	8902782	8903325	544	1219	453	0.033634126333059886	-	CGUACGCGCUCGUUGGCCCUC	88	339	187	381	91	140	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8921529-8922238	Cluster_3415	Pocillopora_meandrina_HIv1___Sc0000010	8921529	8922238	710	900	240	0.9733333333333334	+	UGUAAGACUGACAAAGGCUAAGGUGAACAGC	96	7	844	1	6	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9015035-9015513	Cluster_3416	Pocillopora_meandrina_HIv1___Sc0000010	9015035	9015513	479	11555	898	0.9983556901774123	+	AUCUAAUGAUGACAGCCUCAGU	2229	2398	2577	925	3734	1536	385	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9079066-9079544	Cluster_3417	Pocillopora_meandrina_HIv1___Sc0000010	9079066	9079544	479	1575	399	0.9993650793650793	+	AGGGAAUGACGAUAACCUUGGAGC	120	227	728	149	150	110	211	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9257329-9257857	Cluster_3418	Pocillopora_meandrina_HIv1___Sc0000010	9257329	9257857	529	4960	1031	0.0004032258064516129	-	GAGGAACGUGAUGAGAGA	312	1684	2140	259	339	242	296	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9315058-9315482	Cluster_3419	Pocillopora_meandrina_HIv1___Sc0000010	9315058	9315482	425	699	92	1.0	+	UGCAAGCAUUAGUGGUGUGUCUCU	174	14	130	23	17	45	470	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9717805-9718228	Cluster_3420	Pocillopora_meandrina_HIv1___Sc0000010	9717805	9718228	424	160	53	0.0	-	GCGGUCUUUGAUUUACAAGUCU	20	17	58	1	44	13	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9759460-9759889	Cluster_3421	Pocillopora_meandrina_HIv1___Sc0000010	9759460	9759889	430	126	35	0.9841269841269841	+	ACUGAAGAAAAUUAUAGAAAGGCAACUGAG	44	2	123	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9776404-9776828	Cluster_3422	Pocillopora_meandrina_HIv1___Sc0000010	9776404	9776828	425	175	57	0.0	-	GUGGUCUUUGAUUUACAAGUCUGGU	50	11	100	3	15	24	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9834830-9835310	Cluster_3423	Pocillopora_meandrina_HIv1___Sc0000010	9834830	9835310	481	767	245	1.0	+	CUGAUAAAAGUCAUCAAAACCCUGAGAA	93	73	552	22	41	26	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9847650-9848069	Cluster_3424	Pocillopora_meandrina_HIv1___Sc0000010	9847650	9848069	420	155	17	0.05161290322580645	-	UCUUGAUGUUUGAGCUGAGC	71	144	2	8	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9938591-9939013	Cluster_3425	Pocillopora_meandrina_HIv1___Sc0000010	9938591	9939013	423	182	33	0.9945054945054945	+	UUAUAAUUUACAAACUCUUCUUA	89	4	23	10	28	113	4	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10103315-10103786	Cluster_3426	Pocillopora_meandrina_HIv1___Sc0000010	10103315	10103786	472	11200	518	0.9995535714285714	+	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	2930	548	10234	35	271	56	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10172945-10173373	Cluster_3427	Pocillopora_meandrina_HIv1___Sc0000010	10172945	10173373	429	155	38	0.8709677419354839	+	UCGAUUCCACCGAAAGAAAUAACCUGUGC	61	4	145	3	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10263677-10264104	Cluster_3428	Pocillopora_meandrina_HIv1___Sc0000010	10263677	10264104	428	73	13	1.0	+	AACUGAAGAACCGAUCUCUGAAAUUGAUA	37	1	70	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10888007-10888889	Cluster_3429	Pocillopora_meandrina_HIv1___Sc0000010	10888007	10888889	883	1008	720	0.001984126984126984	-	GACGGAUUAGGAUUGUUUCUUAGGGCAACA	7	214	485	71	86	81	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10889115-10889522	Cluster_3430	Pocillopora_meandrina_HIv1___Sc0000010	10889115	10889522	408	154	113	0.0	-	GAAGAUCAAGGAAACCAUGAAUACU	6	33	70	8	11	19	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11053919-11054459	Cluster_3431	Pocillopora_meandrina_HIv1___Sc0000010	11053919	11054459	541	872	262	0.0	-	GGUGCACUUGUGAAUGGAGCA	156	306	210	227	78	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11163947-11164372	Cluster_3432	Pocillopora_meandrina_HIv1___Sc0000010	11163947	11164372	426	209	101	0.0	-	CAUUGUAGAGUGGUUAUGGCU	13	22	49	31	33	48	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11164832-11165249	Cluster_3433	Pocillopora_meandrina_HIv1___Sc0000010	11164832	11165249	418	171	82	0.0	-	UCAGCCUGAAAGAAAACU	48	102	48	5	5	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11196232-11196659	Cluster_3434	Pocillopora_meandrina_HIv1___Sc0000010	11196232	11196659	428	111	33	1.0	+	UGACAGCUCAUCGAUCAGAAAACAAAGA	30	0	110	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11199054-11199455	Cluster_3435	Pocillopora_meandrina_HIv1___Sc0000010	11199054	11199455	402	145	82	0.593103448275862	.	UUGUGUCAACUCUCGCCAGA	11	54	63	17	10	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11584486-11584903	Cluster_3436	Pocillopora_meandrina_HIv1___Sc0000010	11584486	11584903	418	511	15	1.0	+	CAGCUGUGGCCCUCGGGC	249	511	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:263839-264256	Cluster_3437	Pocillopora_meandrina_HIv1___Sc0000011	263839	264256	418	630	19	0.011111111111111112	-	CGCUACUUUGACCUCAUA	592	623	6	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:350050-350469	Cluster_3438	Pocillopora_meandrina_HIv1___Sc0000011	350050	350469	420	104	19	0.038461538461538464	-	UAGUGCUGAGUACUCUGAGCU	47	33	1	59	8	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:610820-611227	Cluster_3439	Pocillopora_meandrina_HIv1___Sc0000011	610820	611227	408	93	65	0.0	-	UGUGUGACUGCGAGAUUGCU	13	34	24	5	9	18	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:716133-716553	Cluster_3440	Pocillopora_meandrina_HIv1___Sc0000011	716133	716553	421	230	148	0.0	-	GGUGACUAAGACUGAGCAAGC	10	50	91	33	17	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:728487-728906	Cluster_3441	Pocillopora_meandrina_HIv1___Sc0000011	728487	728906	420	175	109	0.9542857142857143	+	UAACGAACUAUGACAGCAAGGGCCUCAC	19	2	167	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1136360-1136777	Cluster_3442	Pocillopora_meandrina_HIv1___Sc0000011	1136360	1136777	418	192	10	0.03125	-	UACCUGGUUGAUUCUGCA	180	189	0	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1205066-1205491	Cluster_3443	Pocillopora_meandrina_HIv1___Sc0000011	1205066	1205491	426	162	61	0.0	-	UUUGAUUGACGUACGGUAUUUGAGACGC	24	3	156	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1284990-1285407	Cluster_3444	Pocillopora_meandrina_HIv1___Sc0000011	1284990	1285407	418	185	122	0.518918918918919	.	UCGGGAUAUGUAGUUGCGUCA	12	95	10	63	15	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1293176-1293610	Cluster_3445	Pocillopora_meandrina_HIv1___Sc0000011	1293176	1293610	435	206	81	0.07766990291262135	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	32	1	188	0	1	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1295664-1296094	Cluster_3446	Pocillopora_meandrina_HIv1___Sc0000011	1295664	1296094	431	649	178	0.007704160246533128	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	182	0	638	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1313428-1313857	Cluster_3447	Pocillopora_meandrina_HIv1___Sc0000011	1313428	1313857	430	223	56	0.06278026905829596	-	AGACAAAACAAGAUUUUGAGAACUGCUUCA	59	2	209	0	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1415864-1417125	Cluster_3448	Pocillopora_meandrina_HIv1___Sc0000011	1415864	1417125	1262	1438	390	0.11821974965229486	-	UAUCCAUGGUACAAAAAUUCGACUCACA	141	17	1310	6	6	18	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1449371-1449820	Cluster_3449	Pocillopora_meandrina_HIv1___Sc0000011	1449371	1449820	450	302	127	0.2913907284768212	.	AGUUGACAUACUGACUGGUACAAAUAAUGGU	20	9	245	6	5	11	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1450351-1450779	Cluster_3450	Pocillopora_meandrina_HIv1___Sc0000011	1450351	1450779	429	110	25	0.08181818181818182	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	48	0	109	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1575633-1576050	Cluster_3451	Pocillopora_meandrina_HIv1___Sc0000011	1575633	1576050	418	145	7	0.9724137931034482	+	UACCCGGAGGAAAAGAAA	138	141	1	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2021516-2021938	Cluster_3452	Pocillopora_meandrina_HIv1___Sc0000011	2021516	2021938	423	80	36	0.9625	+	UUCUGUGAUAUGGAGGUGCUAUCGUCCGU	18	6	68	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2022131-2022898	Cluster_3453	Pocillopora_meandrina_HIv1___Sc0000011	2022131	2022898	768	3921	203	0.060188727365467994	-	CUGGAAAUUUGACUUGCAUGUAGUGUGAUC	2077	9	3813	20	6	17	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2113956-2114378	Cluster_3454	Pocillopora_meandrina_HIv1___Sc0000011	2113956	2114378	423	139	78	0.0	-	AGAGGAAGAACGUGAACGAA	9	43	55	10	6	17	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2235128-2235748	Cluster_3455	Pocillopora_meandrina_HIv1___Sc0000011	2235128	2235748	621	1754	291	0.9526795895096921	+	UCAAAUACAACACCAAAAGAC	552	333	704	628	27	20	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2235755-2236520	Cluster_3456	Pocillopora_meandrina_HIv1___Sc0000011	2235755	2236520	766	635	299	0.8913385826771654	+	UUCGAACGAGCGUACGCAACGGUGUAUC	37	15	580	9	6	4	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2290352-2290769	Cluster_3457	Pocillopora_meandrina_HIv1___Sc0000011	2290352	2290769	418	129	21	0.0	-	AUCCCUCCGGUGCCUCCC	91	118	5	3	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2312713-2313120	Cluster_3458	Pocillopora_meandrina_HIv1___Sc0000011	2312713	2313120	408	114	85	1.0	+	GUGUUAAAAUUCAGCUGGACUG	5	22	50	5	11	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2575797-2576978	Cluster_3459	Pocillopora_meandrina_HIv1___Sc0000011	2575797	2576978	1182	4535	423	0.794928335170893	.	UCAGUCCAAGAUCAUUGAAGCCUCCCGUC	687	37	4372	55	4	17	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2577100-2577509	Cluster_3460	Pocillopora_meandrina_HIv1___Sc0000011	2577100	2577509	410	232	127	0.6853448275862069	.	UAAACAACUCUCCGAUUUAAAUCUUUUCCUU	15	1	207	5	0	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2595018-2595447	Cluster_3461	Pocillopora_meandrina_HIv1___Sc0000011	2595018	2595447	430	108	8	1.0	+	UUUGUGAUGAUUGUGGUCUUGCUACUGGUG	92	0	108	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2740916-2741333	Cluster_3462	Pocillopora_meandrina_HIv1___Sc0000011	2740916	2741333	418	384	16	0.0	-	CUUUCCGAGGUCGCGGAU	306	383	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2863633-2864064	Cluster_3463	Pocillopora_meandrina_HIv1___Sc0000011	2863633	2864064	432	399	83	0.924812030075188	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	54	2	396	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3070672-3071108	Cluster_3464	Pocillopora_meandrina_HIv1___Sc0000011	3070672	3071108	437	282	98	0.9822695035460993	+	UGAUCAUGCCGUCUGAUGCUAUGCCUUU	64	0	279	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3071248-3071764	Cluster_3465	Pocillopora_meandrina_HIv1___Sc0000011	3071248	3071764	517	4277	546	0.8968903436988543	+	UUGGACGCGUUGCUUGUCUGAACAAGGC	627	10	3967	23	13	125	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3073868-3074297	Cluster_3466	Pocillopora_meandrina_HIv1___Sc0000011	3073868	3074297	430	136	40	0.9926470588235294	+	UGUACUGUGAACAUAGUGUUACCAACCAUU	56	0	135	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3164536-3165009	Cluster_3467	Pocillopora_meandrina_HIv1___Sc0000011	3164536	3165009	474	594	147	0.17676767676767677	-	AAGUAUCGAAACGAUCAAGAAGUAAGUC	127	5	567	2	4	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3260168-3260799	Cluster_3468	Pocillopora_meandrina_HIv1___Sc0000011	3260168	3260799	632	447	335	0.0022371364653243847	-	CAAAUGAUCAGUACUGGCA	6	112	176	39	41	48	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3261970-3262570	Cluster_3469	Pocillopora_meandrina_HIv1___Sc0000011	3261970	3262570	601	522	373	0.0	-	UGUGCCCUGAUGGUAAAACUGUAGAGUA	9	106	231	37	60	36	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3270264-3270678	Cluster_3470	Pocillopora_meandrina_HIv1___Sc0000011	3270264	3270678	415	269	192	0.0037174721189591076	-	AAACAGGACGACCAAGCUG	7	82	83	40	13	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3422687-3423112	Cluster_3471	Pocillopora_meandrina_HIv1___Sc0000011	3422687	3423112	426	166	59	0.8734939759036144	+	UUUGUUAGGAGAGUCUGCAACUAAGC	28	2	154	3	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3431914-3432353	Cluster_3472	Pocillopora_meandrina_HIv1___Sc0000011	3431914	3432353	440	773	149	0.0646830530401035	-	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	133	8	738	4	3	13	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3437444-3437874	Cluster_3473	Pocillopora_meandrina_HIv1___Sc0000011	3437444	3437874	431	437	129	1.0	+	UGAUCUUUAAAGUGAAAUUCGCAGGACUUAA	129	2	431	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3478590-3479002	Cluster_3474	Pocillopora_meandrina_HIv1___Sc0000011	3478590	3479002	413	195	113	0.441025641025641	.	ACUGGAUACAAAACUGCUCGAUGC	30	0	127	0	5	14	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3479077-3479821	Cluster_3475	Pocillopora_meandrina_HIv1___Sc0000011	3479077	3479821	745	334	146	0.038922155688622756	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	53	1	324	0	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3482219-3482714	Cluster_3476	Pocillopora_meandrina_HIv1___Sc0000011	3482219	3482714	496	1667	261	0.10677864427114576	-	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	153	9	1616	20	1	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3487323-3487893	Cluster_3477	Pocillopora_meandrina_HIv1___Sc0000011	3487323	3487893	571	364	128	1.0	+	UGAACCCGCGUCUGUCGUGCUACCAAGAUA	37	2	351	0	2	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3488573-3488991	Cluster_3478	Pocillopora_meandrina_HIv1___Sc0000011	3488573	3488991	419	119	48	1.0	+	UGUGCAUUGCAACAUCUGCUAGAUCCUUUGC	35	3	114	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3680927-3681467	Cluster_3479	Pocillopora_meandrina_HIv1___Sc0000011	3680927	3681467	541	475	190	0.0863157894736842	-	UUAAACCGACUCACAGUCCGAUUCGAAU	60	2	447	5	4	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3697531-3697935	Cluster_3480	Pocillopora_meandrina_HIv1___Sc0000011	3697531	3697935	405	207	149	0.9951690821256038	+	AUAUUGCAUAGCGCUCACUGAGUA	6	58	76	22	6	22	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3698610-3699028	Cluster_3481	Pocillopora_meandrina_HIv1___Sc0000011	3698610	3699028	419	202	126	1.0	+	CAUCGAAAAGAAUGGGACUUAUU	10	52	85	22	11	25	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3706024-3706443	Cluster_3482	Pocillopora_meandrina_HIv1___Sc0000011	3706024	3706443	420	252	163	0.996031746031746	+	CGUGAUCUAGAUGCGUGAUUCGGGGAU	16	73	90	28	17	16	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3706666-3707243	Cluster_3483	Pocillopora_meandrina_HIv1___Sc0000011	3706666	3707243	578	367	245	0.997275204359673	+	CAUCGAAAAGAAUGGGACUUAUU	9	72	147	34	33	37	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3743749-3744171	Cluster_3484	Pocillopora_meandrina_HIv1___Sc0000011	3743749	3744171	423	187	126	1.0	+	GACGUGGUUCGACAACUGAGAGAAU	10	51	90	7	19	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3767034-3767443	Cluster_3485	Pocillopora_meandrina_HIv1___Sc0000011	3767034	3767443	410	153	81	0.7908496732026143	.	UGAUCUCAGUUGAAUUGUAAACCAAUU	10	6	122	0	0	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3851657-3852086	Cluster_3486	Pocillopora_meandrina_HIv1___Sc0000011	3851657	3852086	430	455	128	0.12967032967032968	-	UUGGAUAAUUUUGACGAAACCAGAGACA	153	4	411	4	12	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3852351-3852896	Cluster_3487	Pocillopora_meandrina_HIv1___Sc0000011	3852351	3852896	546	403	162	0.8957816377171216	+	AGUUUGCUGAUUUCCUGGUGCUUUGCGA	38	3	320	4	4	22	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3853490-3854454	Cluster_3488	Pocillopora_meandrina_HIv1___Sc0000011	3853490	3854454	965	925	382	0.4962162162162162	.	ACAGGAAGUACAACCACAGA	82	118	747	4	11	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3855302-3855821	Cluster_3489	Pocillopora_meandrina_HIv1___Sc0000011	3855302	3855821	520	355	171	0.30985915492957744	.	UCCGUGUCUAGUCCUCCUUUUGAAUGUG	18	14	302	1	7	13	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4137651-4138080	Cluster_3490	Pocillopora_meandrina_HIv1___Sc0000011	4137651	4138080	430	556	52	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUCG	209	0	551	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4143432-4143861	Cluster_3491	Pocillopora_meandrina_HIv1___Sc0000011	4143432	4143861	430	329	77	0.0364741641337386	-	UGAUCAAGUUUCCUAUCGCCUGUAAACACU	80	2	322	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4433355-4433774	Cluster_3492	Pocillopora_meandrina_HIv1___Sc0000011	4433355	4433774	420	347	252	1.0	+	AGAAUCAUGAGAGCUUUGGUACU	8	87	134	26	31	45	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4435430-4435847	Cluster_3493	Pocillopora_meandrina_HIv1___Sc0000011	4435430	4435847	418	195	126	1.0	+	UGUGCUGUGGGAUACUGU	11	86	41	19	25	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4543638-4544060	Cluster_3494	Pocillopora_meandrina_HIv1___Sc0000011	4543638	4544060	423	105	45	1.0	+	UUUCUGCUGGUUGGUGGAGCUCUGGCAGUU	21	20	61	9	7	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4551808-4552227	Cluster_3495	Pocillopora_meandrina_HIv1___Sc0000011	4551808	4552227	420	158	123	1.0	+	GGAAACUCGACGUAAACGCU	5	51	58	7	23	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4710882-4711311	Cluster_3496	Pocillopora_meandrina_HIv1___Sc0000011	4710882	4711311	430	169	57	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	41	0	168	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4858057-4858484	Cluster_3497	Pocillopora_meandrina_HIv1___Sc0000011	4858057	4858484	428	70	18	0.014285714285714285	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	29	0	70	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4885882-4886715	Cluster_3498	Pocillopora_meandrina_HIv1___Sc0000011	4885882	4886715	834	743	79	0.9878869448183042	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	148	0	714	1	0	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4887046-4887693	Cluster_3499	Pocillopora_meandrina_HIv1___Sc0000011	4887046	4887693	648	253	74	0.9762845849802372	+	AUGGGUCUUAUUGAACAUUACAGAACAGCA	61	6	195	3	5	8	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4893406-4893823	Cluster_3500	Pocillopora_meandrina_HIv1___Sc0000011	4893406	4893823	418	141	81	0.9574468085106383	+	AGAGUUUUGAAGUAAAUCGGCGAAUCGUU	13	0	122	1	3	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4940748-4941167	Cluster_3501	Pocillopora_meandrina_HIv1___Sc0000011	4940748	4941167	420	112	44	0.0	-	CCCUUAACAGCUUGUACUCUG	26	37	22	40	6	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5608018-5608439	Cluster_3502	Pocillopora_meandrina_HIv1___Sc0000011	5608018	5608439	422	180	137	0.9833333333333333	+	AGGGCUGAAGCGACAGAGU	6	49	80	17	18	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5682043-5682449	Cluster_3503	Pocillopora_meandrina_HIv1___Sc0000011	5682043	5682449	407	98	80	0.02040816326530612	-	GAAAUGGCGGUAGGACUCCACAAGGGUCA	4	23	47	5	2	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5740299-5740769	Cluster_3504	Pocillopora_meandrina_HIv1___Sc0000011	5740299	5740769	471	2269	416	1.0	+	CCCAAAUGAUGAGCAGAUU	192	547	1230	80	104	118	190	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5937066-5937593	Cluster_3505	Pocillopora_meandrina_HIv1___Sc0000011	5937066	5937593	528	283	130	0.3745583038869258	.	UCUUGACUCUUCUCGAUAUCCUCUAUGG	25	18	225	4	13	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5937633-5938061	Cluster_3506	Pocillopora_meandrina_HIv1___Sc0000011	5937633	5938061	429	176	31	0.005681818181818182	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	77	0	165	0	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6046750-6047559	Cluster_3507	Pocillopora_meandrina_HIv1___Sc0000011	6046750	6047559	810	619	221	0.05654281098546042	-	UCGGUGUUUUCAAUGUUUAUCGGUUCGG	58	0	599	2	5	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6190043-6190464	Cluster_3508	Pocillopora_meandrina_HIv1___Sc0000011	6190043	6190464	422	128	34	0.84375	+	AAUUGGUAAUGAGAAUAAUCUA	60	15	0	13	79	18	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6215869-6216344	Cluster_3509	Pocillopora_meandrina_HIv1___Sc0000011	6215869	6216344	476	1779	312	0.0	-	AGCCAGUGACGACUUAAUAUAUUCA	121	206	1386	28	41	47	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6216755-6217183	Cluster_3510	Pocillopora_meandrina_HIv1___Sc0000011	6216755	6217183	429	241	111	0.004149377593360996	-	CCAAAAUUUCUGAGGCCA	18	61	107	11	8	23	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6217611-6218693	Cluster_3511	Pocillopora_meandrina_HIv1___Sc0000011	6217611	6218693	1083	5729	825	0.00017455053237912376	-	CACUCUGUGACUUGAUUAGAAAAUCU	475	948	3176	366	510	410	319	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6218840-6219312	Cluster_3512	Pocillopora_meandrina_HIv1___Sc0000011	6218840	6219312	473	16517	974	0.0	-	GUGUGUGAUGACUGCAUAGUUCAACUGAACA	5037	938	11947	613	613	872	1534	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6219545-6220346	Cluster_3513	Pocillopora_meandrina_HIv1___Sc0000011	6219545	6220346	802	3222	663	0.00031036623215394165	-	GCACCUGAUGAAAUAACCUAUGACACA	145	379	2080	149	199	174	241	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6220823-6221301	Cluster_3514	Pocillopora_meandrina_HIv1___Sc0000011	6220823	6221301	479	1913	529	0.0	-	GAGAAUCAUGACUGUGUCAACUGAAGGUA	54	249	1083	121	181	156	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6222022-6222428	Cluster_3515	Pocillopora_meandrina_HIv1___Sc0000011	6222022	6222428	407	197	152	1.0	+	GAGAGUUUGAACUGUGUC	4	47	80	17	19	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6224058-6224473	Cluster_3516	Pocillopora_meandrina_HIv1___Sc0000011	6224058	6224473	416	251	193	1.0	+	GCUGGCCUUAAUGUGAUGAGAAU	4	49	103	28	16	31	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6224571-6224977	Cluster_3517	Pocillopora_meandrina_HIv1___Sc0000011	6224571	6224977	407	246	174	1.0	+	UUCUUUGAUGGAGAGGACUUCUCAGA	6	61	99	17	15	16	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6225964-6226391	Cluster_3518	Pocillopora_meandrina_HIv1___Sc0000011	6225964	6226391	428	355	232	1.0	+	GUGCUGCUAAUGGACAUGAAAC	16	83	127	20	50	35	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6274499-6274927	Cluster_3519	Pocillopora_meandrina_HIv1___Sc0000011	6274499	6274927	429	312	24	0.1282051282051282	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	193	1	310	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6322904-6323442	Cluster_3520	Pocillopora_meandrina_HIv1___Sc0000011	6322904	6323442	539	2637	468	0.6298824421691316	.	AAGAGUGUUAUCUAUUUUAAUAAACUGAGU	482	3	2430	7	12	57	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6464950-6465485	Cluster_3521	Pocillopora_meandrina_HIv1___Sc0000011	6464950	6465485	536	600	210	0.805	+	UUAGCAAGGCUUUCAAACGGA	21	317	70	123	33	39	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6473164-6473733	Cluster_3522	Pocillopora_meandrina_HIv1___Sc0000011	6473164	6473733	570	4247	512	0.9957617141511655	+	AGAAGCGGUAGGAUCUCCUGUUCG	916	1029	1346	461	208	200	1003	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6476865-6477429	Cluster_3523	Pocillopora_meandrina_HIv1___Sc0000011	6476865	6477429	565	3009	827	0.9873712196743104	+	CAGAGUAGGUGCACCGCUGACA	141	1198	578	378	435	223	197	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6480862-6481343	Cluster_3524	Pocillopora_meandrina_HIv1___Sc0000011	6480862	6481343	482	749	337	0.9786381842456608	+	GUUACUGACGUAGGCUUGA	112	314	165	79	52	65	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6483576-6484067	Cluster_3525	Pocillopora_meandrina_HIv1___Sc0000011	6483576	6484067	492	737	213	0.989145183175034	+	AGAAAAGGUGCACCGCUGGCA	51	358	169	143	43	15	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6485782-6486366	Cluster_3526	Pocillopora_meandrina_HIv1___Sc0000011	6485782	6486366	585	4893	956	0.9809932556713673	+	AAGUGAUCACCUGCCGUCA	1217	3133	852	372	185	196	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6489550-6490253	Cluster_3527	Pocillopora_meandrina_HIv1___Sc0000011	6489550	6490253	704	1571	532	0.9923615531508593	+	GUGUUCGGCUUAUAAAACGUCAAGGU	108	482	506	257	95	100	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6645201-6645717	Cluster_3528	Pocillopora_meandrina_HIv1___Sc0000011	6645201	6645717	517	232	77	0.3706896551724138	.	UUAGCGACGAGUGUUCUAUUUCCCUUCAGG	31	1	223	4	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7000730-7001147	Cluster_3529	Pocillopora_meandrina_HIv1___Sc0000011	7000730	7001147	418	149	10	0.9932885906040269	+	UUCUUGGAAUUGCAUGCC	99	146	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7091780-7092256	Cluster_3530	Pocillopora_meandrina_HIv1___Sc0000011	7091780	7092256	477	358	94	0.5586592178770949	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	116	9	298	1	5	23	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7092809-7093233	Cluster_3531	Pocillopora_meandrina_HIv1___Sc0000011	7092809	7093233	425	689	165	0.818577648766328	+	UGAAGUCGAGCUAGAAGAGGA	88	233	118	243	56	27	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7517305-7517727	Cluster_3532	Pocillopora_meandrina_HIv1___Sc0000011	7517305	7517727	423	81	16	1.0	+	AGUGGAGGCCUGUAAUUGCUGCUC	30	6	32	0	0	12	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7538617-7539073	Cluster_3533	Pocillopora_meandrina_HIv1___Sc0000011	7538617	7539073	457	373	155	0.01876675603217158	-	UCUUCGGAGGCGUGGGUUC	33	222	50	31	38	24	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7637705-7638451	Cluster_3534	Pocillopora_meandrina_HIv1___Sc0000011	7637705	7638451	747	1172	705	0.0017064846416382253	-	CCACGGUGAUUGGGGAUUAA	14	262	552	88	79	86	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7638531-7638937	Cluster_3535	Pocillopora_meandrina_HIv1___Sc0000011	7638531	7638937	407	167	128	0.005988023952095809	-	GACAGAACUGUUGAUCAGAAAGC	4	46	74	17	5	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7770864-7771293	Cluster_3536	Pocillopora_meandrina_HIv1___Sc0000011	7770864	7771293	430	376	31	0.005319148936170213	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	214	2	374	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8011145-8011574	Cluster_3537	Pocillopora_meandrina_HIv1___Sc0000011	8011145	8011574	430	142	55	0.971830985915493	+	UGAAUAGCAUAACUGAUGAACUACGUG	21	0	140	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8012096-8013451	Cluster_3538	Pocillopora_meandrina_HIv1___Sc0000011	8012096	8013451	1356	1410	593	0.8978723404255319	+	UCCGUGACACAACGACUUUGCCUUGCUU	118	9	1350	5	11	12	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8276048-8276475	Cluster_3539	Pocillopora_meandrina_HIv1___Sc0000011	8276048	8276475	428	152	61	0.23026315789473684	.	UAACAGGAUCAACAAAGUGUCGAGCAUG	31	1	146	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8412931-8413349	Cluster_3540	Pocillopora_meandrina_HIv1___Sc0000011	8412931	8413349	419	443	17	0.0	-	GGGGCUGUGGCUCAGUUGG	260	439	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8478554-8479134	Cluster_3541	Pocillopora_meandrina_HIv1___Sc0000011	8478554	8479134	581	1029	376	0.6297376093294461	.	CGUGUAAACAAGCGAUCUGUAAGA	112	25	761	18	16	31	178	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8490498-8491052	Cluster_3542	Pocillopora_meandrina_HIv1___Sc0000011	8490498	8491052	555	768	244	0.88671875	+	UAGUAUAACUUUGAUCUGAUGAAAAUAAUC	286	8	708	3	12	14	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8492338-8492764	Cluster_3543	Pocillopora_meandrina_HIv1___Sc0000011	8492338	8492764	427	145	44	0.9862068965517241	+	UGAUAAUCAAAACGUCGGGCACAAGUCACU	53	1	131	2	2	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8494971-8496105	Cluster_3544	Pocillopora_meandrina_HIv1___Sc0000011	8494971	8496105	1135	6973	674	0.9516707299584111	+	UGAAAAAAUCUUCUGUUAUAAACACCUGA	1788	29	6657	21	12	77	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8499550-8500281	Cluster_3545	Pocillopora_meandrina_HIv1___Sc0000011	8499550	8500281	732	2088	258	0.8903256704980843	+	UGAGAAGAACUUCACUAACUUGACUAGUGA	961	7	2048	1	6	6	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8534433-8535505	Cluster_3546	Pocillopora_meandrina_HIv1___Sc0000011	8534433	8535505	1073	873	287	0.14891179839633448	-	UGUGAUGCUUGUAGGAUGAAAAUGUCU	61	3	823	2	3	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8580119-8580548	Cluster_3547	Pocillopora_meandrina_HIv1___Sc0000011	8580119	8580548	430	217	116	0.14285714285714285	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	32	2	202	1	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8581778-8582481	Cluster_3548	Pocillopora_meandrina_HIv1___Sc0000011	8581778	8582481	704	283	133	0.07420494699646643	-	UGUACUUUGUCUUUGUUGAAUUUGAUUC	32	1	269	3	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8622522-8623855	Cluster_3549	Pocillopora_meandrina_HIv1___Sc0000011	8622522	8623855	1334	2325	753	0.16989247311827957	-	UGGAUUACAAGUAAACACAACUGCCUGU	236	15	2074	13	21	121	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8632776-8633199	Cluster_3550	Pocillopora_meandrina_HIv1___Sc0000011	8632776	8633199	424	149	56	0.9060402684563759	+	UGGGUCGUAUUCCUAAAUCUUGAGCAA	20	7	125	1	0	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8759529-8759949	Cluster_3551	Pocillopora_meandrina_HIv1___Sc0000011	8759529	8759949	421	98	37	0.7857142857142857	.	UAUGCAUUGAACGGUAAGGGUAU	34	14	3	14	4	52	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8942245-8942671	Cluster_3552	Pocillopora_meandrina_HIv1___Sc0000011	8942245	8942671	427	791	96	0.06573957016434892	-	UUUCAAACUAAGGAAGGAGAAAGG	209	8	420	14	38	34	277	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8943032-8943461	Cluster_3553	Pocillopora_meandrina_HIv1___Sc0000011	8943032	8943461	430	1495	90	0.9839464882943144	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	769	7	1475	2	0	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8989633-8990060	Cluster_3554	Pocillopora_meandrina_HIv1___Sc0000011	8989633	8990060	428	79	26	0.012658227848101266	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	19	1	78	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9386857-9387285	Cluster_3555	Pocillopora_meandrina_HIv1___Sc0000011	9386857	9387285	429	2829	83	0.0	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2205	5	2821	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9637992-9638413	Cluster_3556	Pocillopora_meandrina_HIv1___Sc0000011	9637992	9638413	422	150	86	0.0	-	UCCAGCUAUGUGAUCUGAACUGAAAAGUUU	33	22	95	8	10	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9680438-9680860	Cluster_3557	Pocillopora_meandrina_HIv1___Sc0000011	9680438	9680860	423	153	108	0.7908496732026143	.	UAACACUAUAAACAUUCUGAGGGCGAUU	8	1	133	2	6	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9680873-9681301	Cluster_3558	Pocillopora_meandrina_HIv1___Sc0000011	9680873	9681301	429	183	91	0.912568306010929	+	UGUUUUCCUUGGUCUAUUAAUGAACGU	11	3	175	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9711844-9712790	Cluster_3559	Pocillopora_meandrina_HIv1___Sc0000011	9711844	9712790	947	2213	740	0.087663804789878	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	168	13	2076	13	15	29	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9712795-9713663	Cluster_3560	Pocillopora_meandrina_HIv1___Sc0000011	9712795	9713663	869	531	265	0.06779661016949153	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	23	3	506	2	1	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9713864-9715859	Cluster_3561	Pocillopora_meandrina_HIv1___Sc0000011	9713864	9715859	1996	3523	1174	0.05960828839057621	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	200	40	3260	17	17	63	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9739953-9741132	Cluster_3562	Pocillopora_meandrina_HIv1___Sc0000011	9739953	9741132	1180	1356	513	0.09218289085545722	-	UGUCACUUUGCCGAUGGCUUGACUCGUG	83	11	1233	8	10	54	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9742190-9742888	Cluster_3563	Pocillopora_meandrina_HIv1___Sc0000011	9742190	9742888	699	707	244	0.036775106082036775	-	UAGGACGCUCUACUCCCUCAGCAGUACGGU	64	5	653	1	5	8	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9743273-9744734	Cluster_3564	Pocillopora_meandrina_HIv1___Sc0000011	9743273	9744734	1462	3094	779	0.011635423400129283	-	UGACUUUGUACAGGACUGGACCCGUUUGUUC	211	29	2985	16	8	21	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9747736-9748158	Cluster_3565	Pocillopora_meandrina_HIv1___Sc0000011	9747736	9748158	423	526	40	0.9866920152091255	+	UGACUGUCGGUCAACUGUCGGC	211	11	3	9	304	199	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9786853-9788785	Cluster_3566	Pocillopora_meandrina_HIv1___Sc0000011	9786853	9788785	1933	8331	1768	0.04669307406073701	-	UGUGUGGUUUUUGUAAGAACUAAAAAGUUC	1689	119	8013	31	25	44	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9789366-9791702	Cluster_3567	Pocillopora_meandrina_HIv1___Sc0000011	9789366	9791702	2337	5839	2068	0.8051036136324713	+	UCGUAGUAAACAUGGCUUCUUUUUAAAGA	207	116	5227	51	51	185	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9794038-9794468	Cluster_3568	Pocillopora_meandrina_HIv1___Sc0000011	9794038	9794468	431	152	17	0.02631578947368421	-	UGAGUAAACCUUCUUUUAAAUUUGAACAUUU	68	0	152	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9794660-9795088	Cluster_3569	Pocillopora_meandrina_HIv1___Sc0000011	9794660	9795088	429	145	31	0.0	-	CACCAAAACAACGUAGCUCUUUUGCCAUC	85	0	144	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9806603-9807305	Cluster_3570	Pocillopora_meandrina_HIv1___Sc0000011	9806603	9807305	703	2741	308	0.7530098504195549	.	UGUGUUAGACUUUAACAGGAAAGAAUG	632	13	2696	8	5	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9807646-9808055	Cluster_3571	Pocillopora_meandrina_HIv1___Sc0000011	9807646	9808055	410	156	87	0.5961538461538461	.	UGGUUCUUGUAGUUGUACUGGUCGCC	8	1	143	1	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9808207-9808633	Cluster_3572	Pocillopora_meandrina_HIv1___Sc0000011	9808207	9808633	427	232	75	0.8318965517241379	+	UGGAAUGAAGUUUAUGCAGUCUGCUAGA	38	0	208	1	1	2	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9809468-9810654	Cluster_3573	Pocillopora_meandrina_HIv1___Sc0000011	9809468	9810654	1187	2529	481	0.9308026888098062	+	UGACUAUCAUCUGAAAGGGGCAAUUGGU	293	39	2384	5	27	35	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9825528-9826474	Cluster_3574	Pocillopora_meandrina_HIv1___Sc0000011	9825528	9826474	947	1164	418	0.14347079037800686	-	UCUGUCUCGUAUCAUCUCAUCUGUGAGC	79	11	1032	10	34	23	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9826662-9827089	Cluster_3575	Pocillopora_meandrina_HIv1___Sc0000011	9826662	9827089	428	261	140	0.05363984674329502	-	UCUUCUCCUUGACUUCCUUUUGUAGAGU	34	1	249	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9828072-9828840	Cluster_3576	Pocillopora_meandrina_HIv1___Sc0000011	9828072	9828840	769	457	188	0.06564551422319474	-	UGAUUCAUCAGUAUUAAUGACUGUAGU	65	9	424	0	3	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9836945-9837359	Cluster_3577	Pocillopora_meandrina_HIv1___Sc0000011	9836945	9837359	415	282	159	0.05319148936170213	-	UGACUGUGGAGCAUUGCUGAUAAUGUU	14	3	269	1	2	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9845259-9845688	Cluster_3578	Pocillopora_meandrina_HIv1___Sc0000011	9845259	9845688	430	213	78	0.0	-	UAUUCAAAGUAAUCUCUGGAGAAGACUGGC	58	2	210	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9848383-9848810	Cluster_3579	Pocillopora_meandrina_HIv1___Sc0000011	9848383	9848810	428	305	107	0.009836065573770493	-	UCAACGGUGCCACUCUGGACUUUCCUGU	50	0	299	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9849209-9849638	Cluster_3580	Pocillopora_meandrina_HIv1___Sc0000011	9849209	9849638	430	192	50	0.0	-	UGAAUUUGACGUUUGACUGCCUUGUUCAGC	116	2	188	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9861491-9862035	Cluster_3581	Pocillopora_meandrina_HIv1___Sc0000011	9861491	9862035	545	1601	356	0.7713928794503435	.	GAAAGAAUUAGAGAAUGGGCGUCGCAGG	142	47	1055	29	39	119	312	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9868640-9869317	Cluster_3582	Pocillopora_meandrina_HIv1___Sc0000011	9868640	9869317	678	295	178	0.8847457627118644	+	UGAAUGAUGUUGUCGAGUAGAUUGAGAGU	22	2	271	1	9	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9869468-9869877	Cluster_3583	Pocillopora_meandrina_HIv1___Sc0000011	9869468	9869877	410	187	93	0.6149732620320856	.	UAAUAUCAGUUUCUGGUCAAGAUCAAGA	23	8	124	0	22	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9869941-9870466	Cluster_3584	Pocillopora_meandrina_HIv1___Sc0000011	9869941	9870466	526	550	213	0.9163636363636364	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	68	3	458	4	0	11	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9874015-9875090	Cluster_3585	Pocillopora_meandrina_HIv1___Sc0000011	9874015	9875090	1076	575	202	0.0034782608695652175	-	UGCUUCCAGGAAACAGGCAGAAAAUAUGC	99	6	555	2	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9876546-9876963	Cluster_3586	Pocillopora_meandrina_HIv1___Sc0000011	9876546	9876963	418	367	97	0.0	-	AUCCCACUUCUGACACCA	213	276	82	0	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9881499-9882549	Cluster_3587	Pocillopora_meandrina_HIv1___Sc0000011	9881499	9882549	1051	860	412	0.022093023255813953	-	UACUUUUCCAGGCGUCUAGGUCAAACUU	43	27	800	5	6	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9883183-9883608	Cluster_3588	Pocillopora_meandrina_HIv1___Sc0000011	9883183	9883608	426	175	87	0.0	-	UGCAGAAUCCUGAGCAAUAUUGUCUU	36	1	166	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10071736-10072156	Cluster_3589	Pocillopora_meandrina_HIv1___Sc0000011	10071736	10072156	421	155	100	0.03225806451612903	-	AUGUGAAGCAAGGAUCAUGAAGACU	16	26	80	16	3	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10082662-10083084	Cluster_3590	Pocillopora_meandrina_HIv1___Sc0000011	10082662	10083084	423	74	23	1.0	+	CACGGAUUGUUGUGUCUCUAGCUG	10	0	46	0	4	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10238979-10239401	Cluster_3591	Pocillopora_meandrina_HIv1___Sc0000011	10238979	10239401	423	169	41	0.9289940828402367	+	AUGAAAAUACGUAAUGCAGCUC	26	10	1	14	85	47	12	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10250224-10250643	Cluster_3592	Pocillopora_meandrina_HIv1___Sc0000011	10250224	10250643	420	1784	9	1.0	+	GAAGUUCUGGUUUAAAAAA	790	1782	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10323826-10326083	Cluster_3593	Pocillopora_meandrina_HIv1___Sc0000011	10323826	10326083	2258	18715	2705	0.993748330216404	+	UGUGUAACUUAUCGUAUCCUGGUUGUCC	2670	111	18098	37	140	182	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10437910-10438799	Cluster_3594	Pocillopora_meandrina_HIv1___Sc0000011	10437910	10438799	890	554	380	0.9981949458483754	+	AACUUGUGAAUUAAUUGAAUGAUU	21	108	225	48	43	51	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10442828-10443451	Cluster_3595	Pocillopora_meandrina_HIv1___Sc0000011	10442828	10443451	624	1097	286	0.10665451230628988	-	UAAGAUUCCAAGAUAUUUAAAACAAGU	95	10	963	3	15	11	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:125341-125768	Cluster_3596	Pocillopora_meandrina_HIv1___Sc0000012	125341	125768	428	223	99	0.04035874439461883	-	UGUGAAUCUUUUUACUCGUUAUGUUAAGUAG	15	4	208	2	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:126609-127033	Cluster_3597	Pocillopora_meandrina_HIv1___Sc0000012	126609	127033	425	122	47	1.0	+	UUGAAUGUUUCAGCUGUUGAUAAGAGCACU	20	4	103	1	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:127941-128369	Cluster_3598	Pocillopora_meandrina_HIv1___Sc0000012	127941	128369	429	117	17	1.0	+	GUGCGAGAUAAGAUCUCUGAAGAUGACAGG	46	0	111	0	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:241078-241499	Cluster_3599	Pocillopora_meandrina_HIv1___Sc0000012	241078	241499	422	167	119	0.9940119760479041	+	AAAGAAAUGAUUGAUCUUGUUCUGGACA	6	46	86	6	12	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:429013-429511	Cluster_3600	Pocillopora_meandrina_HIv1___Sc0000012	429013	429511	499	754	109	0.007957559681697613	-	CGAUCCAACAAGAACAAUAUGUGCUUACUA	169	3	717	4	5	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:694963-695392	Cluster_3601	Pocillopora_meandrina_HIv1___Sc0000012	694963	695392	430	516	86	0.9689922480620154	+	UGCGUAGCUCAACACGAUUUCGUCAAAGGA	94	3	501	0	0	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:697287-697703	Cluster_3602	Pocillopora_meandrina_HIv1___Sc0000012	697287	697703	417	98	29	1.0	+	UGAUAACUUUAAGACGUUCCAACCUUUGG	22	0	97	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:879109-879525	Cluster_3603	Pocillopora_meandrina_HIv1___Sc0000012	879109	879525	417	128	84	0.0	-	UUAGACAGUAUGCUAAAGACA	5	30	56	12	4	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:934758-935175	Cluster_3604	Pocillopora_meandrina_HIv1___Sc0000012	934758	935175	418	134	12	0.05970149253731343	-	UUGAACUCGACCCUGUCA	110	127	3	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1127321-1127875	Cluster_3605	Pocillopora_meandrina_HIv1___Sc0000012	1127321	1127875	555	615	271	0.08943089430894309	-	UAAUGAAGUCGUAAUUUGUCCAUCC	75	5	574	3	10	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1128547-1128965	Cluster_3606	Pocillopora_meandrina_HIv1___Sc0000012	1128547	1128965	419	190	110	0.02631578947368421	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	19	0	186	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1129185-1129616	Cluster_3607	Pocillopora_meandrina_HIv1___Sc0000012	1129185	1129616	432	303	108	0.0627062706270627	-	UACGUGUAGAAAGCCUUCUCUGACAUC	29	2	277	3	1	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1495883-1496342	Cluster_3608	Pocillopora_meandrina_HIv1___Sc0000012	1495883	1496342	460	560	174	0.0	-	CAGACAGAUACGGAGCUUACAGAU	53	111	152	33	107	51	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1574026-1575119	Cluster_3609	Pocillopora_meandrina_HIv1___Sc0000012	1574026	1575119	1094	1093	432	0.989935956084172	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	85	13	1058	1	3	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1575154-1575556	Cluster_3610	Pocillopora_meandrina_HIv1___Sc0000012	1575154	1575556	403	141	86	0.9361702127659575	+	UGGGAAUCCGAAUCGUGGUACAAAGUCA	11	4	127	0	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1575778-1576203	Cluster_3611	Pocillopora_meandrina_HIv1___Sc0000012	1575778	1576203	426	225	132	0.9466666666666667	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	31	1	200	6	5	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1576712-1577155	Cluster_3612	Pocillopora_meandrina_HIv1___Sc0000012	1576712	1577155	444	962	327	0.9449064449064449	+	UGUUGCUCAAAGGUCUUACUAUACACCA	83	67	794	52	29	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1577210-1578254	Cluster_3613	Pocillopora_meandrina_HIv1___Sc0000012	1577210	1578254	1045	1153	468	0.955767562879445	+	UCUUGCCGUAGCAUUUCGUGGACGAUCA	117	20	1069	12	5	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1578389-1579995	Cluster_3614	Pocillopora_meandrina_HIv1___Sc0000012	1578389	1579995	1607	2051	921	0.841540711847879	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	93	18	1857	24	23	43	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1700342-1700751	Cluster_3615	Pocillopora_meandrina_HIv1___Sc0000012	1700342	1700751	410	198	89	0.7929292929292929	.	UUGUCAACAAGAACCUUGACCAUUUUGU	15	1	184	1	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1720627-1721055	Cluster_3616	Pocillopora_meandrina_HIv1___Sc0000012	1720627	1721055	429	87	22	0.9885057471264368	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	2	81	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1778902-1779420	Cluster_3617	Pocillopora_meandrina_HIv1___Sc0000012	1778902	1779420	519	999	295	0.8128128128128128	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	124	17	848	2	12	68	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1813691-1814109	Cluster_3618	Pocillopora_meandrina_HIv1___Sc0000012	1813691	1814109	419	228	8	0.013157894736842105	-	AACUUUUGACGGUGUCUAU	215	228	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2637212-2637903	Cluster_3619	Pocillopora_meandrina_HIv1___Sc0000012	2637212	2637903	692	898	507	0.9922048997772829	+	CCUGUGUGUGCUCAGACA	28	240	335	91	80	72	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2807434-2807851	Cluster_3620	Pocillopora_meandrina_HIv1___Sc0000012	2807434	2807851	418	112	13	0.9732142857142857	+	GAAACAUGCUCUGAGCUC	53	105	4	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2886188-2886621	Cluster_3621	Pocillopora_meandrina_HIv1___Sc0000012	2886188	2886621	434	1372	249	0.0007288629737609329	-	AUUAACUGAAGACACCUGUAACUCUGAAU	246	89	1036	13	121	54	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2886971-2887446	Cluster_3622	Pocillopora_meandrina_HIv1___Sc0000012	2886971	2887446	476	2010	297	0.0	-	UGGAAUGAUGAGUCACUCUUUGAUA	256	282	1421	161	86	20	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2889479-2889955	Cluster_3623	Pocillopora_meandrina_HIv1___Sc0000012	2889479	2889955	477	2334	339	0.0	-	UUAACUGAAGACACCUUUUACUCUGAAU	348	118	1845	52	162	67	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2926923-2927342	Cluster_3624	Pocillopora_meandrina_HIv1___Sc0000012	2926923	2927342	420	168	55	0.19047619047619047	-	GGGCCUGUUUCGUGAAUCGC	38	109	13	28	11	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3102775-3103192	Cluster_3625	Pocillopora_meandrina_HIv1___Sc0000012	3102775	3103192	418	193	108	1.0	+	AGUGUUGCUGAACGAAAAAGGAA	11	55	75	19	19	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3291569-3291996	Cluster_3626	Pocillopora_meandrina_HIv1___Sc0000012	3291569	3291996	428	176	72	0.3806818181818182	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	29	1	162	1	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3301242-3301663	Cluster_3627	Pocillopora_meandrina_HIv1___Sc0000012	3301242	3301663	422	160	108	0.85625	+	UAACACUAUAAACAUUCUGAGGGCGAUU	11	0	143	3	5	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3301677-3302105	Cluster_3628	Pocillopora_meandrina_HIv1___Sc0000012	3301677	3302105	429	204	106	0.8823529411764706	+	UGAACGUAUAGCCAUCCAGUUGAACUUG	13	1	197	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3417269-3417875	Cluster_3629	Pocillopora_meandrina_HIv1___Sc0000012	3417269	3417875	607	768	166	0.9036458333333334	+	UGGUAAAAUUCUGUUCAAAGU	99	9	571	141	12	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3443230-3443876	Cluster_3630	Pocillopora_meandrina_HIv1___Sc0000012	3443230	3443876	647	748	320	0.11229946524064172	-	UGAAAUACUUGUUCUUUUCCCUGGUUUGCC	85	4	705	5	6	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3443902-3444331	Cluster_3631	Pocillopora_meandrina_HIv1___Sc0000012	3443902	3444331	430	693	68	0.0	-	UCAGCUCUUUCUAACUCUGCAAUUUGAGGU	257	0	692	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3549634-3550061	Cluster_3632	Pocillopora_meandrina_HIv1___Sc0000012	3549634	3550061	428	165	63	0.9696969696969697	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	36	2	158	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3702105-3702532	Cluster_3633	Pocillopora_meandrina_HIv1___Sc0000012	3702105	3702532	428	84	28	0.011904761904761904	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	24	0	80	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3943387-3943815	Cluster_3634	Pocillopora_meandrina_HIv1___Sc0000012	3943387	3943815	429	109	27	0.045871559633027525	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	48	1	108	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4244144-4244572	Cluster_3635	Pocillopora_meandrina_HIv1___Sc0000012	4244144	4244572	429	109	20	0.009174311926605505	-	GAAGAUUUCUUUGAGAUAGAUGUAGCACA	39	1	104	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4256145-4256553	Cluster_3636	Pocillopora_meandrina_HIv1___Sc0000012	4256145	4256553	409	130	58	0.18461538461538463	-	UAUUUGCACUAUUGUGGAAAAUUCCUGA	27	1	122	2	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4299145-4299601	Cluster_3637	Pocillopora_meandrina_HIv1___Sc0000012	4299145	4299601	457	2540	174	1.0	+	UAUUUGUACAUCGCUGACUUGUUU	543	85	718	20	107	571	1039	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4477901-4478318	Cluster_3638	Pocillopora_meandrina_HIv1___Sc0000012	4477901	4478318	418	728	23	0.0	-	GGAAUCGGCCGUGGAUUA	517	728	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4527319-4527727	Cluster_3639	Pocillopora_meandrina_HIv1___Sc0000012	4527319	4527727	409	129	78	0.49612403100775193	.	CUCGCGUCUGAAGCUGUUAGAGU	15	47	14	16	20	28	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4527933-4528397	Cluster_3640	Pocillopora_meandrina_HIv1___Sc0000012	4527933	4528397	465	297	167	0.4882154882154882	.	UUCGCGUCUGAAGCUGUUAA	28	126	90	52	17	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4724333-4724835	Cluster_3641	Pocillopora_meandrina_HIv1___Sc0000012	4724333	4724835	503	409	169	0.9926650366748166	+	UUCUACUGCUGUAACUUCAUGAAUACUGC	38	4	395	0	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4724871-4725617	Cluster_3642	Pocillopora_meandrina_HIv1___Sc0000012	4724871	4725617	747	674	261	0.9970326409495549	+	UAAGUGCUUUUUCCGACUAACUUUUCUGU	43	10	637	9	2	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4908638-4909067	Cluster_3643	Pocillopora_meandrina_HIv1___Sc0000012	4908638	4909067	430	297	36	0.0	-	AUACUCUAGCAUUCAGACGGAAGAUUCGCU	129	9	279	5	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4929534-4929951	Cluster_3644	Pocillopora_meandrina_HIv1___Sc0000012	4929534	4929951	418	74	9	0.972972972972973	+	CGGCCUGAAAAAAAAAAA	31	71	0	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5242362-5242790	Cluster_3645	Pocillopora_meandrina_HIv1___Sc0000012	5242362	5242790	429	121	31	1.0	+	UGCAUAUCUUGAACUAGUCGGUUGUGAUU	70	0	118	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5269393-5269872	Cluster_3646	Pocillopora_meandrina_HIv1___Sc0000012	5269393	5269872	480	482	307	0.022821576763485476	-	GUUCGAUUCCGGAGAGGGAGCCG	37	98	158	58	57	70	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5271161-5271569	Cluster_3647	Pocillopora_meandrina_HIv1___Sc0000012	5271161	5271569	409	69	17	0.9565217391304348	+	AACGAGACCUUGACCUGCU	22	68	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5275572-5276707	Cluster_3648	Pocillopora_meandrina_HIv1___Sc0000012	5275572	5276707	1136	12284	2197	0.001872354281992836	-	CUAGUACUGUGAAACUGCGAAUGGCU	845	2383	5503	891	919	915	1673	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5279849-5281602	Cluster_3649	Pocillopora_meandrina_HIv1___Sc0000012	5279849	5281602	1754	1056279	21160	7.289740684042758e-05	-	CAGCUGUGACCCUCGGGU	218255	693156	212245	80047	40356	18131	12344	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5282066-5282622	Cluster_3650	Pocillopora_meandrina_HIv1___Sc0000012	5282066	5282622	557	1294	138	0.062596599690881	-	UCAUUCACAUCCAUCUGUAAGAAUUUGC	217	6	1206	1	4	4	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5295733-5297102	Cluster_3651	Pocillopora_meandrina_HIv1___Sc0000012	5295733	5297102	1370	6141660	41994	3.337859796862738e-05	-	CUCGGGCUGAGACUUGAAGCA	1189262	1631280	1074543	1917613	385459	1027492	105273	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5299291-5303738	Cluster_3652	Pocillopora_meandrina_HIv1___Sc0000012	5299291	5303738	4448	793450	70169	0.9994240342806731	+	AACUUUUGACGGUGGAUCU	17324	229836	329400	66297	61492	54262	52163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5461911-5462337	Cluster_3653	Pocillopora_meandrina_HIv1___Sc0000012	5461911	5462337	427	79	33	0.9746835443037974	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	26	0	78	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5463579-5464005	Cluster_3654	Pocillopora_meandrina_HIv1___Sc0000012	5463579	5464005	427	211	125	0.8293838862559242	+	UGAGUCGAGGUUAUUCACAAUACGAGC	33	4	185	1	1	2	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5507235-5507668	Cluster_3655	Pocillopora_meandrina_HIv1___Sc0000012	5507235	5507668	434	584	50	0.886986301369863	+	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	366	0	581	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5579115-5579537	Cluster_3656	Pocillopora_meandrina_HIv1___Sc0000012	5579115	5579537	423	93	37	0.34408602150537637	.	UUGUACCGGUCCAUAUGUCAACUGUUG	16	1	90	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5605813-5606228	Cluster_3657	Pocillopora_meandrina_HIv1___Sc0000012	5605813	5606228	416	238	146	0.7941176470588235	.	UGUGCUGAUUCAAACGGUCAUAACUUUUGA	13	66	122	28	12	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5739796-5740215	Cluster_3658	Pocillopora_meandrina_HIv1___Sc0000012	5739796	5740215	420	411	36	1.0	+	CUCGGGCUGAGACUUGACCU	85	394	0	17	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5868872-5869353	Cluster_3659	Pocillopora_meandrina_HIv1___Sc0000012	5868872	5869353	482	248	116	0.9274193548387096	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	21	14	180	5	3	14	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6081718-6082147	Cluster_3660	Pocillopora_meandrina_HIv1___Sc0000012	6081718	6082147	430	183	69	0.04371584699453552	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGU	44	0	177	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6088634-6089062	Cluster_3661	Pocillopora_meandrina_HIv1___Sc0000012	6088634	6089062	429	131	42	0.9847328244274809	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	2	128	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6098305-6100303	Cluster_3662	Pocillopora_meandrina_HIv1___Sc0000012	6098305	6100303	1999	4088	1396	0.10738747553816047	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	341	31	3799	27	33	68	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6100310-6101281	Cluster_3663	Pocillopora_meandrina_HIv1___Sc0000012	6100310	6101281	972	656	320	0.14329268292682926	-	UGAACUUCUCGGCUCCAAACACUAUGG	61	10	610	1	2	13	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6101297-6103188	Cluster_3664	Pocillopora_meandrina_HIv1___Sc0000012	6101297	6103188	1892	1859	734	0.06401291016675632	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	161	29	1696	16	17	34	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6137887-6138307	Cluster_3665	Pocillopora_meandrina_HIv1___Sc0000012	6137887	6138307	421	152	64	0.9736842105263158	+	UACUUAACGUUGGCAGUACUG	39	6	79	61	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6183151-6183691	Cluster_3666	Pocillopora_meandrina_HIv1___Sc0000012	6183151	6183691	541	626	160	0.22364217252396165	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	181	2	598	4	4	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6342093-6342496	Cluster_3667	Pocillopora_meandrina_HIv1___Sc0000012	6342093	6342496	404	108	79	0.0	-	CUAGUGUGAACUGAGACGGU	3	25	53	10	9	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6455183-6455276	Cluster_3668	Pocillopora_meandrina_HIv1___Sc0000012	6455183	6455276	94	2416	125	1.0	+	UGAAAUACUCUGACGGAGUCAGC	1099	309	151	42	196	1431	287	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000012:6591857-6592296	Cluster_3669	Pocillopora_meandrina_HIv1___Sc0000012	6591857	6592296	440	2371	173	0.0	-	UCUGUUAGAAUGAAGAAAGGGACUCCGUC	401	23	2281	8	14	16	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6610946-6611372	Cluster_3670	Pocillopora_meandrina_HIv1___Sc0000012	6610946	6611372	427	185	49	0.32432432432432434	.	CGUGUUUGGAUUGCGAUCACCUGGAGCA	27	2	171	1	1	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6715855-6716285	Cluster_3671	Pocillopora_meandrina_HIv1___Sc0000012	6715855	6716285	431	327	112	0.1162079510703364	-	UACUUCUUGUGACAUUGAAAUGGAUUCCA	35	32	293	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6743354-6743999	Cluster_3672	Pocillopora_meandrina_HIv1___Sc0000012	6743354	6743999	646	3534	534	0.2354272778720996	.	GUGAUUUUCAGUUCAGGACAAUGCAAUUUU	430	53	2806	18	43	85	529	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6750710-6751474	Cluster_3673	Pocillopora_meandrina_HIv1___Sc0000012	6750710	6751474	765	1580	207	0.3411392405063291	.	UGAGAAAAAUGUGACAUGAGAAAUUGAUU	570	61	1407	2	8	23	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6939591-6940020	Cluster_3674	Pocillopora_meandrina_HIv1___Sc0000012	6939591	6940020	430	427	40	0.00234192037470726	-	AACUACUGCUCGUGCUCUAGAUAUGACG	147	16	408	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6963867-6964294	Cluster_3675	Pocillopora_meandrina_HIv1___Sc0000012	6963867	6964294	428	217	38	0.041474654377880185	-	AACUACUGCUCGUGCUCUAGAUAUGACA	109	5	205	1	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6972503-6972930	Cluster_3676	Pocillopora_meandrina_HIv1___Sc0000012	6972503	6972930	428	343	52	0.15160349854227406	-	AGGGACUGAAACAUCGACUGAAGACG	96	3	284	8	0	14	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6988644-6989900	Cluster_3677	Pocillopora_meandrina_HIv1___Sc0000012	6988644	6989900	1257	5193	1343	0.2722896206431735	.	UGUUGUCGAUUAGCUUUGGUACACAGUU	213	57	4470	36	290	123	217	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7218635-7219064	Cluster_3678	Pocillopora_meandrina_HIv1___Sc0000012	7218635	7219064	430	135	52	0.007407407407407408	-	AAACGAUUGAAUAGCAUAACUGAUGAACUA	16	0	132	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7535780-7536207	Cluster_3679	Pocillopora_meandrina_HIv1___Sc0000012	7535780	7536207	428	136	45	0.0	-	UUUGAUCCGUCUUCGCAUGAAAUGCUGC	42	6	123	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7549463-7549893	Cluster_3680	Pocillopora_meandrina_HIv1___Sc0000012	7549463	7549893	431	2611	137	0.0007659900421294523	-	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	689	4	2599	2	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7556157-7556581	Cluster_3681	Pocillopora_meandrina_HIv1___Sc0000012	7556157	7556581	425	133	75	0.9849624060150376	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	10	1	118	1	6	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7556645-7557690	Cluster_3682	Pocillopora_meandrina_HIv1___Sc0000012	7556645	7557690	1046	2507	772	0.9417630634224172	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	283	24	2343	13	29	40	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7557706-7559193	Cluster_3683	Pocillopora_meandrina_HIv1___Sc0000012	7557706	7559193	1488	4001	1295	0.9005248687828042	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	160	53	3565	18	31	154	180	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7565839-7566256	Cluster_3684	Pocillopora_meandrina_HIv1___Sc0000012	7565839	7566256	418	72	4	0.9861111111111112	+	UGAUGUUUGAGCUGAGCA	60	72	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7787967-7788385	Cluster_3685	Pocillopora_meandrina_HIv1___Sc0000012	7787967	7788385	419	188	52	0.07446808510638298	-	UUGGGUACUGGUGCACUGG	75	76	75	1	4	28	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7917423-7917838	Cluster_3686	Pocillopora_meandrina_HIv1___Sc0000012	7917423	7917838	416	137	70	0.5620437956204379	.	UCUUGAUUCAAGUAGGCUUAACA	41	3	81	0	1	50	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7919105-7919763	Cluster_3687	Pocillopora_meandrina_HIv1___Sc0000012	7919105	7919763	659	1873	427	0.15429791777896423	-	UGUGUAGUUCUUCCUAAGACUUUCGUC	124	19	1708	19	12	29	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7920052-7920755	Cluster_3688	Pocillopora_meandrina_HIv1___Sc0000012	7920052	7920755	704	3479	487	0.06151192871514803	-	UGCAAUGGAUCUAGUACUAUCAAGUUC	751	25	3266	23	63	21	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7921185-7921614	Cluster_3689	Pocillopora_meandrina_HIv1___Sc0000012	7921185	7921614	430	791	142	0.9747155499367889	+	UAGUACUGGUGAUUUCUGUUAAUGG	168	1	744	3	16	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7922225-7922758	Cluster_3690	Pocillopora_meandrina_HIv1___Sc0000012	7922225	7922758	534	5104	310	0.9937304075235109	+	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	3018	16	5020	8	10	15	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8079060-8079487	Cluster_3691	Pocillopora_meandrina_HIv1___Sc0000012	8079060	8079487	428	238	89	0.07563025210084033	-	UAUGACCGUUUGAAUCAGCCCAUGUACG	68	23	206	4	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8302325-8302754	Cluster_3692	Pocillopora_meandrina_HIv1___Sc0000012	8302325	8302754	430	98	29	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	0	96	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8477056-8477462	Cluster_3693	Pocillopora_meandrina_HIv1___Sc0000012	8477056	8477462	407	146	121	0.0	-	CGACUAGUGUGAGUACACCAUU	3	42	57	13	9	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8592535-8592957	Cluster_3694	Pocillopora_meandrina_HIv1___Sc0000012	8592535	8592957	423	114	65	0.07894736842105263	-	AAUGGGAAAACGAGGACAGCGUGA	13	5	73	2	2	10	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8593072-8594026	Cluster_3695	Pocillopora_meandrina_HIv1___Sc0000012	8593072	8594026	955	3322	286	0.009030704394942806	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	1215	4	3217	1	4	21	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8669892-8670347	Cluster_3696	Pocillopora_meandrina_HIv1___Sc0000012	8669892	8670347	456	218	97	0.9678899082568807	+	UGAGAGAGCUGCUGAGUGCAAAAAGUACUUC	51	11	201	2	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8678382-8678810	Cluster_3697	Pocillopora_meandrina_HIv1___Sc0000012	8678382	8678810	429	164	79	1.0	+	UGCUACAAAAAAGGACGUGUUGAGCAGGC	22	1	162	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8680468-8680897	Cluster_3698	Pocillopora_meandrina_HIv1___Sc0000012	8680468	8680897	430	264	126	1.0	+	UGCUCUUGUCUUGGAUGUAAGUGCCUAACA	29	2	258	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8684119-8684548	Cluster_3699	Pocillopora_meandrina_HIv1___Sc0000012	8684119	8684548	430	334	110	1.0	+	UGACAUCGACAUAAGACAUAGAAAAAUGCG	86	0	324	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8702728-8703537	Cluster_3700	Pocillopora_meandrina_HIv1___Sc0000012	8702728	8703537	810	1630	258	0.9987730061349693	+	UACAUAGCCUUGAGGGUUGCAUUGCUCCACA	347	9	1533	2	1	74	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8706679-8707249	Cluster_3701	Pocillopora_meandrina_HIv1___Sc0000012	8706679	8707249	571	40234	558	0.9975393945419297	+	UUGUCUACAAGAAGCCUGUCCAUUUUGU	26961	41	39795	21	35	46	296	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8707330-8707985	Cluster_3702	Pocillopora_meandrina_HIv1___Sc0000012	8707330	8707985	656	1896	388	0.9783755274261603	+	UUUUCCCAUUGAACUACAAUAAAACCCAUC	191	82	1743	26	10	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8709379-8709804	Cluster_3703	Pocillopora_meandrina_HIv1___Sc0000012	8709379	8709804	426	189	82	1.0	+	UGUUGAUUGCUUGACCACUGAGUUGA	49	2	167	7	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8715359-8715788	Cluster_3704	Pocillopora_meandrina_HIv1___Sc0000012	8715359	8715788	430	95	26	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	0	94	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8718444-8718865	Cluster_3705	Pocillopora_meandrina_HIv1___Sc0000012	8718444	8718865	422	212	130	0.839622641509434	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	14	3	198	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8718887-8719317	Cluster_3706	Pocillopora_meandrina_HIv1___Sc0000012	8718887	8719317	431	321	150	0.9532710280373832	+	UGAUAACUGUACUCUUGAAAUUCAUCG	21	2	309	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8721572-8722739	Cluster_3707	Pocillopora_meandrina_HIv1___Sc0000012	8721572	8722739	1168	3201	959	0.4845360824742268	.	UGCAUUAUGUCAAAUUUAGAUUCAUCU	213	41	2879	16	27	78	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8726442-8727520	Cluster_3708	Pocillopora_meandrina_HIv1___Sc0000012	8726442	8727520	1079	3912	913	0.8778118609406953	+	UUGGUAACAGUGUGGUGGAGAACGUGAUU	140	34	3710	24	26	50	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8729518-8730305	Cluster_3709	Pocillopora_meandrina_HIv1___Sc0000012	8729518	8730305	788	396	157	0.9696969696969697	+	UCGGUAACUAAACGGUCAAAAUUAUACUUU	80	1	380	2	0	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8731310-8731729	Cluster_3710	Pocillopora_meandrina_HIv1___Sc0000012	8731310	8731729	420	103	34	0.9902912621359223	+	UGAUCUUUGCAAUGACGUUGUGACUGAAAA	21	1	99	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8752386-8752974	Cluster_3711	Pocillopora_meandrina_HIv1___Sc0000012	8752386	8752974	589	7087	567	0.6644560462819247	.	UACGUCUGGCCAGCAAUCAACAUCGUC	1577	218	5859	98	29	43	840	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8753728-8754289	Cluster_3712	Pocillopora_meandrina_HIv1___Sc0000012	8753728	8754289	562	378	99	0.9947089947089947	+	UAGGUAGUAACGACUGAAAAAAUUCCCU	54	29	341	3	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8759693-8760122	Cluster_3713	Pocillopora_meandrina_HIv1___Sc0000012	8759693	8760122	430	295	113	1.0	+	UGAGCAAGUAACAAAAUCGUUUUGUGGAUU	73	1	280	0	7	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8760474-8760900	Cluster_3714	Pocillopora_meandrina_HIv1___Sc0000012	8760474	8760900	427	345	86	0.8492753623188406	+	UCUGUUUCCAUUGUAUUGAGAGUCUCA	158	8	333	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8762436-8762904	Cluster_3715	Pocillopora_meandrina_HIv1___Sc0000012	8762436	8762904	469	638	217	0.8275862068965517	+	UCUUUCGAUCUUCGUCAAACGAACCCGUU	217	95	461	52	19	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8769890-8770387	Cluster_3716	Pocillopora_meandrina_HIv1___Sc0000012	8769890	8770387	498	279	139	0.9390681003584229	+	UGAUUCAUCAGUAUUAAUGACUGUAGU	61	5	257	2	3	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8770560-8770965	Cluster_3717	Pocillopora_meandrina_HIv1___Sc0000012	8770560	8770965	406	301	193	0.627906976744186	.	UGACUAAACUGUGCUCGUGGAAUGUAUG	15	5	257	4	9	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8771210-8771620	Cluster_3718	Pocillopora_meandrina_HIv1___Sc0000012	8771210	8771620	411	130	89	0.8615384615384616	+	UGCGAGUGGCUACUUUGAAUAAUUUAAAC	6	1	122	1	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8771991-8772540	Cluster_3719	Pocillopora_meandrina_HIv1___Sc0000012	8771991	8772540	550	602	240	0.7491694352159468	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	66	9	538	7	2	8	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8783229-8784507	Cluster_3720	Pocillopora_meandrina_HIv1___Sc0000012	8783229	8784507	1279	4002	1361	0.3040979510244878	.	UUAACCAUGUCGAAACGUAUCAGCAGUG	151	76	3482	62	36	73	273	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8785059-8786838	Cluster_3721	Pocillopora_meandrina_HIv1___Sc0000012	8785059	8786838	1780	3112	1167	0.7686375321336761	.	AGGUGUAGAAUGUAAAAAGCAGCU	135	33	2644	22	27	84	302	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8791402-8791892	Cluster_3722	Pocillopora_meandrina_HIv1___Sc0000012	8791402	8791892	491	447	162	0.6375838926174496	.	GAAUCGGCCGUGGAUUUGC	40	157	274	0	3	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8794216-8794640	Cluster_3723	Pocillopora_meandrina_HIv1___Sc0000012	8794216	8794640	425	73	21	1.0	+	UGAUAGUAGUGCAAAGACAUGUGUUGGUG	17	0	73	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8806206-8807054	Cluster_3724	Pocillopora_meandrina_HIv1___Sc0000012	8806206	8807054	849	3185	774	0.8775510204081632	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	364	17	3001	21	21	26	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8807244-8810153	Cluster_3725	Pocillopora_meandrina_HIv1___Sc0000012	8807244	8810153	2910	14306	2898	0.87068362924647	+	UGAUCGAUAGUUUCGCUCUGGAGUUGUG	1276	107	13473	54	58	235	379	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8827931-8828910	Cluster_3726	Pocillopora_meandrina_HIv1___Sc0000012	8827931	8828910	980	1291	215	0.9883810999225406	+	UGUCACACUUUGAACACACAAAAAAGGA	305	136	1105	11	8	2	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9075476-9076779	Cluster_3727	Pocillopora_meandrina_HIv1___Sc0000012	9075476	9076779	1304	1348	596	0.9821958456973294	+	UGCUUUCUGUUCUCUUGUUCUCCAACAAA	68	3	1287	5	11	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9076968-9077377	Cluster_3728	Pocillopora_meandrina_HIv1___Sc0000012	9076968	9077377	410	187	105	0.3582887700534759	.	ACUGGAUACAAAACUGCUCGAUGC	24	3	139	0	2	7	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9077455-9078199	Cluster_3729	Pocillopora_meandrina_HIv1___Sc0000012	9077455	9078199	745	349	159	0.06876790830945559	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	59	3	338	1	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9079951-9081503	Cluster_3730	Pocillopora_meandrina_HIv1___Sc0000012	9079951	9081503	1553	10879	1819	0.9845574041731777	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1238	58	10478	31	45	81	186	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9102736-9104308	Cluster_3731	Pocillopora_meandrina_HIv1___Sc0000012	9102736	9104308	1573	2278	977	0.9319578577699736	+	UAGGAUCAUAGUCUUUGAACUCCGACGG	86	17	2079	7	17	92	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9104863-9105713	Cluster_3732	Pocillopora_meandrina_HIv1___Sc0000012	9104863	9105713	851	1560	498	0.8942307692307693	+	UGAUUUAUAGGAGUAAUGAGACAUUAU	140	25	1430	15	19	20	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9109032-9110534	Cluster_3733	Pocillopora_meandrina_HIv1___Sc0000012	9109032	9110534	1503	1729	752	0.9612492770387507	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	49	18	1615	6	27	26	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9110815-9111493	Cluster_3734	Pocillopora_meandrina_HIv1___Sc0000012	9110815	9111493	679	874	283	0.9816933638443935	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	170	2	846	1	6	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9111593-9112009	Cluster_3735	Pocillopora_meandrina_HIv1___Sc0000012	9111593	9112009	417	138	79	0.8985507246376812	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	21	1	125	1	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9112220-9113011	Cluster_3736	Pocillopora_meandrina_HIv1___Sc0000012	9112220	9113011	792	1066	407	0.7926829268292683	.	UGCUCAAAACGUUCUACUCCGAAAAGUAU	42	13	901	8	12	69	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9113299-9113734	Cluster_3737	Pocillopora_meandrina_HIv1___Sc0000012	9113299	9113734	436	239	87	0.9246861924686193	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	49	0	223	0	0	15	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9114316-9114858	Cluster_3738	Pocillopora_meandrina_HIv1___Sc0000012	9114316	9114858	543	869	359	0.8308400460299195	+	UCUAUCACUUUGUCGAUGUCGGUUUUCU	36	19	739	12	12	16	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9116931-9118951	Cluster_3739	Pocillopora_meandrina_HIv1___Sc0000012	9116931	9118951	2021	3147	1253	0.9561487130600572	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	93	15	2974	14	32	43	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9119216-9120301	Cluster_3740	Pocillopora_meandrina_HIv1___Sc0000012	9119216	9120301	1086	6364	566	0.9258328095537398	+	UCAUAGAGUUUAAGACAAGCCCAACAGGUC	2402	58	6061	36	108	43	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9126640-9127054	Cluster_3741	Pocillopora_meandrina_HIv1___Sc0000012	9126640	9127054	415	247	138	0.979757085020243	+	UCUCUAACUCGUCGUCUGCUUCAUCAGC	23	4	234	3	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9127123-9127835	Cluster_3742	Pocillopora_meandrina_HIv1___Sc0000012	9127123	9127835	713	1042	191	0.9952015355086372	+	UUAUAACCGAGUGUGCCUUAUAACCGAAU	213	2	1031	0	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9153751-9154840	Cluster_3743	Pocillopora_meandrina_HIv1___Sc0000012	9153751	9154840	1090	5023	1045	0.9082221779812861	+	UCAUCGACAUGCCUUGACUUUGAGCAGU	655	49	4783	23	19	49	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9192779-9193208	Cluster_3744	Pocillopora_meandrina_HIv1___Sc0000012	9192779	9193208	430	302	77	0.006622516556291391	-	UACUCCGACACUCCGAUAUGUGAUACUAC	75	1	297	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9311500-9311918	Cluster_3745	Pocillopora_meandrina_HIv1___Sc0000012	9311500	9311918	419	130	74	0.007692307692307693	-	CCCAAACUGUAUGUGAAGCUUCA	26	37	25	8	14	35	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9312883-9313417	Cluster_3746	Pocillopora_meandrina_HIv1___Sc0000012	9312883	9313417	535	311	159	0.0	-	AAUAUUGUGGAGGCAGCUGCA	15	104	82	37	19	39	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9416464-9416881	Cluster_3747	Pocillopora_meandrina_HIv1___Sc0000012	9416464	9416881	418	200	46	1.0	+	UUGGGUGGCGUUUUCUUA	45	193	3	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9496539-9497031	Cluster_3748	Pocillopora_meandrina_HIv1___Sc0000012	9496539	9497031	493	197	37	0.5685279187817259	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	66	1	195	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9751539-9751968	Cluster_3749	Pocillopora_meandrina_HIv1___Sc0000012	9751539	9751968	430	90	35	0.9111111111111111	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	34	0	86	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9767406-9767837	Cluster_3750	Pocillopora_meandrina_HIv1___Sc0000012	9767406	9767837	432	1239	84	0.0129136400322841	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	397	0	1239	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9772164-9772580	Cluster_3751	Pocillopora_meandrina_HIv1___Sc0000012	9772164	9772580	417	82	13	1.0	+	AUCCCACUCCUGACACCA	30	79	0	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9778224-9778651	Cluster_3752	Pocillopora_meandrina_HIv1___Sc0000012	9778224	9778651	428	136	22	0.9926470588235294	+	UUCCUGCAAUGGUUUGUGCAUCGUCUGG	38	3	133	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9808305-9808733	Cluster_3753	Pocillopora_meandrina_HIv1___Sc0000012	9808305	9808733	429	89	29	0.011235955056179775	-	UGACUUUAUUUGCGUCACGGAUUAGCUGGC	21	0	88	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9831017-9831446	Cluster_3754	Pocillopora_meandrina_HIv1___Sc0000012	9831017	9831446	430	187	90	1.0	+	UCUGUCUCUACGUCGGUGCAAACCAUGCGC	15	3	180	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9836384-9837012	Cluster_3755	Pocillopora_meandrina_HIv1___Sc0000012	9836384	9837012	629	365	142	0.7643835616438356	.	UCGAUCAGGAGAUACAGAGGGAGCUGAGA	27	9	276	0	19	22	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9890862-9891282	Cluster_3756	Pocillopora_meandrina_HIv1___Sc0000012	9890862	9891282	421	87	42	0.0	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	14	1	80	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9922141-9922628	Cluster_3757	Pocillopora_meandrina_HIv1___Sc0000012	9922141	9922628	488	681	214	0.7298091042584435	.	CGGCUGCUCAGUAAUUUUCGAUGGGAGU	80	9	596	13	9	26	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9958130-9958557	Cluster_3758	Pocillopora_meandrina_HIv1___Sc0000012	9958130	9958557	428	167	63	0.16167664670658682	-	AACUGAUAGAGCUGCUACACCUGGAAGC	66	21	117	6	14	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9964596-9965831	Cluster_3759	Pocillopora_meandrina_HIv1___Sc0000012	9964596	9965831	1236	7169	457	0.0012554052169061235	-	UACUGAACUGGCUAACAUUUGUACAAAAUC	3446	40	6793	7	40	26	263	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9966705-9967134	Cluster_3760	Pocillopora_meandrina_HIv1___Sc0000012	9966705	9967134	430	448	113	0.046875	-	UUUGCUCUCCAUUCUGCCAGUAGGCCA	52	27	408	6	2	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:247172-247662	Cluster_3761	Pocillopora_meandrina_HIv1___Sc0000013	247172	247662	491	595	273	0.28907563025210087	.	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	19	29	423	18	20	38	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:249636-250051	Cluster_3762	Pocillopora_meandrina_HIv1___Sc0000013	249636	250051	416	112	50	0.8660714285714286	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	15	1	101	0	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:250128-251251	Cluster_3763	Pocillopora_meandrina_HIv1___Sc0000013	250128	251251	1124	578	284	0.9256055363321799	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	41	9	543	3	4	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:251265-252162	Cluster_3764	Pocillopora_meandrina_HIv1___Sc0000013	251265	252162	898	819	365	0.8461538461538461	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	48	1	757	2	6	13	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:338858-339285	Cluster_3765	Pocillopora_meandrina_HIv1___Sc0000013	338858	339285	428	145	52	0.11724137931034483	-	UACGUAUCAAUACAGACACUUUCGUUCA	53	3	137	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:347884-350366	Cluster_3766	Pocillopora_meandrina_HIv1___Sc0000013	347884	350366	2483	5047	1595	0.926490984743412	+	UCCGAGACUGUAGAUCCGAGUUGAUCCA	215	48	4703	17	35	85	159	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:474790-475215	Cluster_3767	Pocillopora_meandrina_HIv1___Sc0000013	474790	475215	426	169	83	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	23	2	155	0	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:560422-560849	Cluster_3768	Pocillopora_meandrina_HIv1___Sc0000013	560422	560849	428	609	52	1.0	+	UAAUCGUUGGCUUUUUCUCGAGGCGUG	268	0	609	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:742806-743235	Cluster_3769	Pocillopora_meandrina_HIv1___Sc0000013	742806	743235	430	439	116	0.9635535307517085	+	UGUAGAAUCAAUCUGUUACUAAGACACC	88	0	417	13	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:743991-744451	Cluster_3770	Pocillopora_meandrina_HIv1___Sc0000013	743991	744451	461	1615	477	0.8303405572755418	+	UAUACCUUUGAUUCAUAGCCUUUCUGAUU	78	18	1446	17	21	37	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:744782-746779	Cluster_3771	Pocillopora_meandrina_HIv1___Sc0000013	744782	746779	1998	5350	1597	0.10560747663551402	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	350	59	4979	22	51	70	169	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:746786-747213	Cluster_3772	Pocillopora_meandrina_HIv1___Sc0000013	746786	747213	428	372	171	0.12634408602150538	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	57	2	347	2	2	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:747331-747757	Cluster_3773	Pocillopora_meandrina_HIv1___Sc0000013	747331	747757	427	205	104	0.0975609756097561	-	UGAACUUCUCGGCUCCAAACACUAUGG	57	2	192	2	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:747773-748277	Cluster_3774	Pocillopora_meandrina_HIv1___Sc0000013	747773	748277	505	707	278	0.10183875530410184	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	65	13	640	5	5	18	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:748490-749664	Cluster_3775	Pocillopora_meandrina_HIv1___Sc0000013	748490	749664	1175	1124	443	0.05782918149466192	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	134	16	1000	14	26	32	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:922124-922918	Cluster_3776	Pocillopora_meandrina_HIv1___Sc0000013	922124	922918	795	258	103	0.9689922480620154	+	UGAAUUUCUGAAGUGUGUUACUGUGGUA	36	2	243	2	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1574801-1575213	Cluster_3777	Pocillopora_meandrina_HIv1___Sc0000013	1574801	1575213	413	175	113	0.8057142857142857	+	UGUAAGACGCACUCUACUCUGUUGU	12	8	148	0	2	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1671541-1672316	Cluster_3778	Pocillopora_meandrina_HIv1___Sc0000013	1671541	1672316	776	256	37	0.95703125	+	UUGGACUGUGCAUAACCAUUUGC	117	6	100	3	3	136	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1700374-1701707	Cluster_3779	Pocillopora_meandrina_HIv1___Sc0000013	1700374	1701707	1334	6457	1566	0.5942388105931548	.	AAGCAGAAGAAGAUCUUGGUGACA	692	82	4456	36	218	263	1402	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1702155-1702858	Cluster_3780	Pocillopora_meandrina_HIv1___Sc0000013	1702155	1702858	704	1022	371	0.05870841487279843	-	UGUUCCUUGAAUUCUGCGUGCACAAAGC	190	15	957	2	9	12	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1702993-1704979	Cluster_3781	Pocillopora_meandrina_HIv1___Sc0000013	1702993	1704979	1987	2765	1156	0.06835443037974684	-	UGAUAACUUGCUAUCGAUCGCGGUACU	80	65	2525	35	24	41	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1705053-1705652	Cluster_3782	Pocillopora_meandrina_HIv1___Sc0000013	1705053	1705652	600	1662	693	0.14921780986762936	-	UAGGUUGGAACUUGCUCACUGUGUGCG	62	37	1400	27	25	84	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1714408-1714827	Cluster_3783	Pocillopora_meandrina_HIv1___Sc0000013	1714408	1714827	420	258	170	0.875968992248062	+	UCUAUAUUACAAAAUAAAUUGUGGGACGUA	16	70	121	33	17	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1869675-1870100	Cluster_3784	Pocillopora_meandrina_HIv1___Sc0000013	1869675	1870100	426	186	108	0.14516129032258066	-	UAAGUACUACAUCGUUCGAUAGGCUCUCAGC	19	4	166	3	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1870222-1870651	Cluster_3785	Pocillopora_meandrina_HIv1___Sc0000013	1870222	1870651	430	418	103	0.04066985645933014	-	UGAUCAAGUUUCCUAUCGCCUGUAAACA	95	2	400	2	4	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1924250-1925026	Cluster_3786	Pocillopora_meandrina_HIv1___Sc0000013	1924250	1925026	777	226	28	0.9911504424778761	+	UUGGACUGUGCAUAACCAUUUGC	103	1	92	0	4	124	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2014873-2016892	Cluster_3787	Pocillopora_meandrina_HIv1___Sc0000013	2014873	2016892	2020	3233	1044	0.24837612124961336	.	UGAUACGAGUAGUUGGAUACAAUCUAAACU	320	33	2960	15	19	55	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2017862-2019125	Cluster_3788	Pocillopora_meandrina_HIv1___Sc0000013	2017862	2019125	1264	1504	573	0.8105053191489362	+	UGUAACUGGUUCACUGCGAUUUUGUAGU	84	17	1328	8	11	36	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2019206-2019650	Cluster_3789	Pocillopora_meandrina_HIv1___Sc0000013	2019206	2019650	445	849	249	0.8468786808009423	+	UGAUAUGACCUUCGGCAAAAAACUGGA	91	2	752	1	5	18	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2585014-2585433	Cluster_3790	Pocillopora_meandrina_HIv1___Sc0000013	2585014	2585433	420	77	26	0.025974025974025976	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	22	0	75	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2586733-2587160	Cluster_3791	Pocillopora_meandrina_HIv1___Sc0000013	2586733	2587160	428	177	71	0.022598870056497175	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	30	2	169	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2639722-2640750	Cluster_3792	Pocillopora_meandrina_HIv1___Sc0000013	2639722	2640750	1029	2383	610	0.9840537138061267	+	UCGGAUUACGCACGAUCACACGUGUCGAGC	100	4	2319	7	13	13	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2641296-2642053	Cluster_3793	Pocillopora_meandrina_HIv1___Sc0000013	2641296	2642053	758	708	329	0.9590395480225988	+	UGCGUUCCUGAAGCAACUUUUGCCUC	55	7	662	11	4	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2949719-2950629	Cluster_3794	Pocillopora_meandrina_HIv1___Sc0000013	2949719	2950629	911	495	241	0.044444444444444446	-	UAGGUAAUGGCACAAACUGAGAGGCGU	26	1	471	5	2	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2953747-2954523	Cluster_3795	Pocillopora_meandrina_HIv1___Sc0000013	2953747	2954523	777	214	28	1.0	+	UUGGACUGUGCAUAACCAUUUGC	105	0	80	0	3	126	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3143644-3144540	Cluster_3796	Pocillopora_meandrina_HIv1___Sc0000013	3143644	3144540	897	1855	556	0.1078167115902965	-	UAAUAGCGACUUUCAACUUCGUGUUUGUC	187	30	1705	25	25	26	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3145050-3146621	Cluster_3797	Pocillopora_meandrina_HIv1___Sc0000013	3145050	3146621	1572	2219	968	0.06714736367733214	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	86	16	2031	12	8	87	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3236496-3236922	Cluster_3798	Pocillopora_meandrina_HIv1___Sc0000013	3236496	3236922	427	161	60	0.018633540372670808	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	38	2	151	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3300861-3301290	Cluster_3799	Pocillopora_meandrina_HIv1___Sc0000013	3300861	3301290	430	609	136	0.9885057471264368	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	137	1	598	1	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3301411-3301941	Cluster_3800	Pocillopora_meandrina_HIv1___Sc0000013	3301411	3301941	531	672	241	0.9910714285714286	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	38	1	659	3	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3303861-3304796	Cluster_3801	Pocillopora_meandrina_HIv1___Sc0000013	3303861	3304796	936	598	306	0.9214046822742475	+	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	29	11	554	4	5	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3304809-3305374	Cluster_3802	Pocillopora_meandrina_HIv1___Sc0000013	3304809	3305374	566	3446	656	0.9773650609402206	+	UGAUUUGUACGACCCACUCCUGUUAAC	364	155	3093	10	34	35	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3318557-3319049	Cluster_3803	Pocillopora_meandrina_HIv1___Sc0000013	3318557	3319049	493	496	281	0.19556451612903225	-	GGAAGAAUUAGAUAAUGAGAAGCU	15	5	427	2	4	8	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3319168-3320243	Cluster_3804	Pocillopora_meandrina_HIv1___Sc0000013	3319168	3320243	1076	3351	918	0.05401372724559833	-	UAUUGAUCUUACAGGCUCCGCAGCGGUU	179	48	3142	25	18	30	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3320297-3321342	Cluster_3805	Pocillopora_meandrina_HIv1___Sc0000013	3320297	3321342	1046	981	414	0.05402650356778797	-	UAUAGUUCUUCUGUACUGGCUCAUUGUC	58	10	931	1	7	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3321678-3322080	Cluster_3806	Pocillopora_meandrina_HIv1___Sc0000013	3321678	3322080	403	259	194	0.35135135135135137	.	UGCGUGAGAAAUCCUGGAUGUAUUGCC	7	49	131	30	22	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3322344-3323396	Cluster_3807	Pocillopora_meandrina_HIv1___Sc0000013	3322344	3323396	1053	607	313	0.06754530477759473	-	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	32	15	547	5	9	13	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3323431-3324524	Cluster_3808	Pocillopora_meandrina_HIv1___Sc0000013	3323431	3324524	1094	1119	450	0.020554066130473638	-	UGAGACUCUCUUGUUGUAAUAUUGCUUG	101	10	1072	4	6	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3417712-3418164	Cluster_3809	Pocillopora_meandrina_HIv1___Sc0000013	3417712	3418164	453	238	90	0.9915966386554622	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	46	0	231	0	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3418321-3418805	Cluster_3810	Pocillopora_meandrina_HIv1___Sc0000013	3418321	3418805	485	335	194	0.8477611940298507	+	UGAUUCCGCGCUUAUGACUCGUCCCAU	21	5	290	3	6	13	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3419082-3421738	Cluster_3811	Pocillopora_meandrina_HIv1___Sc0000013	3419082	3421738	2657	4481	1398	0.9361749609462173	+	UGUACAACCAUCCGAUACUCUUGU	672	31	3218	20	14	85	1113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3421762-3422943	Cluster_3812	Pocillopora_meandrina_HIv1___Sc0000013	3421762	3422943	1182	1490	653	0.887248322147651	+	UUGGAUACAUGAUCAGAUUCGUAACA	65	57	1333	6	16	28	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3423867-3424974	Cluster_3813	Pocillopora_meandrina_HIv1___Sc0000013	3423867	3424974	1108	1376	563	0.8677325581395349	+	UACAAUAACCUCUGAUUUCACUAAAUG	57	16	1263	3	11	23	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3639403-3640179	Cluster_3814	Pocillopora_meandrina_HIv1___Sc0000013	3639403	3640179	777	409	45	0.9975550122249389	+	UUGGACUGUGCAUAACCAUUUGC	117	2	243	1	6	145	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3889072-3889786	Cluster_3815	Pocillopora_meandrina_HIv1___Sc0000013	3889072	3889786	715	358	183	0.03910614525139665	-	UGUGGUUACGCCCUUCAAGUGAGAAAACUGA	29	7	342	2	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4059763-4060364	Cluster_3816	Pocillopora_meandrina_HIv1___Sc0000013	4059763	4060364	602	937	329	0.9957310565635006	+	UGUUCUUCUUGACUCUGACGAUCUUCAAC	106	1	926	3	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4060437-4061315	Cluster_3817	Pocillopora_meandrina_HIv1___Sc0000013	4060437	4061315	879	932	406	0.9914163090128756	+	UGCUGAAACGAUUUUGACAGGUUGUCA	58	12	881	4	5	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4061691-4062571	Cluster_3818	Pocillopora_meandrina_HIv1___Sc0000013	4061691	4062571	881	1193	436	0.9941324392288349	+	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	90	6	1165	4	5	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4062973-4063459	Cluster_3819	Pocillopora_meandrina_HIv1___Sc0000013	4062973	4063459	487	528	185	0.9943181818181818	+	UACAAAGCUCUCACGAAUUCACAAACAGA	65	0	521	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4081126-4081571	Cluster_3820	Pocillopora_meandrina_HIv1___Sc0000013	4081126	4081571	446	559	71	0.7227191413237924	.	UCGUUUAGAUCAGAGAUCACCUCAACU	195	0	556	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4113474-4113899	Cluster_3821	Pocillopora_meandrina_HIv1___Sc0000013	4113474	4113899	426	93	23	0.989247311827957	+	UGUGUAGAUAUGUCUUUUGGACAGGA	30	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4115225-4115648	Cluster_3822	Pocillopora_meandrina_HIv1___Sc0000013	4115225	4115648	424	172	86	0.8837209302325582	+	UAAAAUGACUGUUUCCGAUGUUCCCU	12	1	157	1	10	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4150193-4150672	Cluster_3823	Pocillopora_meandrina_HIv1___Sc0000013	4150193	4150672	480	1750	206	0.9988571428571429	+	UGGACAAAUUCAUAGGUCUGAUGCAAACAUG	388	29	1700	2	7	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4150722-4151147	Cluster_3824	Pocillopora_meandrina_HIv1___Sc0000013	4150722	4151147	426	157	55	0.9363057324840764	+	UAAGACCCAUCCAUCACUAUCAACUCG	26	0	155	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4151796-4152224	Cluster_3825	Pocillopora_meandrina_HIv1___Sc0000013	4151796	4152224	429	162	29	0.9876543209876543	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	71	0	162	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4157441-4157851	Cluster_3826	Pocillopora_meandrina_HIv1___Sc0000013	4157441	4157851	411	98	40	0.5612244897959183	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	21	1	95	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4160208-4160634	Cluster_3827	Pocillopora_meandrina_HIv1___Sc0000013	4160208	4160634	427	183	59	0.825136612021858	+	UGUCAAAUUCUCGUCUUCCUAACCUUU	66	0	179	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4178116-4178583	Cluster_3828	Pocillopora_meandrina_HIv1___Sc0000013	4178116	4178583	468	520	177	0.10192307692307692	-	UUAAACCGACUCACAGUCCGAUUCGAAU	111	2	478	6	4	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4188955-4190082	Cluster_3829	Pocillopora_meandrina_HIv1___Sc0000013	4188955	4190082	1128	616	332	0.08441558441558442	-	UAGGUAAUGGCACAAACUGAGAGGCGU	29	2	571	1	4	16	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4192997-4193773	Cluster_3830	Pocillopora_meandrina_HIv1___Sc0000013	4192997	4193773	777	269	25	1.0	+	UUGGACUGUGCAUAACCAUUUGC	134	0	110	0	2	157	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4470522-4471298	Cluster_3831	Pocillopora_meandrina_HIv1___Sc0000013	4470522	4471298	777	265	30	1.0	+	UUGGACUGUGCAUAACCAUUUGC	124	1	104	0	3	155	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4504525-4504942	Cluster_3832	Pocillopora_meandrina_HIv1___Sc0000013	4504525	4504942	418	147	3	0.9931972789115646	+	UGGCCUGAAAAAAAAAAA	145	147	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4609215-4609720	Cluster_3833	Pocillopora_meandrina_HIv1___Sc0000013	4609215	4609720	506	411	135	0.5644768856447688	.	AAGGAUACCACAUUCGGAAGUGUAAGAGA	61	16	371	2	5	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4609804-4610233	Cluster_3834	Pocillopora_meandrina_HIv1___Sc0000013	4609804	4610233	430	410	140	0.9707317073170731	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	48	11	292	11	5	26	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4811421-4811847	Cluster_3835	Pocillopora_meandrina_HIv1___Sc0000013	4811421	4811847	427	172	83	0.29069767441860467	.	UGUCGACCGCAACCGCAAGCUUUCCGAGU	22	8	156	2	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4816264-4816691	Cluster_3836	Pocillopora_meandrina_HIv1___Sc0000013	4816264	4816691	428	253	90	0.8260869565217391	+	UACGUAUCAAUACAGACACUUUCGUUCA	104	5	237	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4860236-4860664	Cluster_3837	Pocillopora_meandrina_HIv1___Sc0000013	4860236	4860664	429	205	52	0.926829268292683	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	76	0	189	0	0	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5103387-5104123	Cluster_3838	Pocillopora_meandrina_HIv1___Sc0000013	5103387	5104123	737	3946	558	0.9842878864673087	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	801	13	3870	4	2	15	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5105247-5106448	Cluster_3839	Pocillopora_meandrina_HIv1___Sc0000013	5105247	5106448	1202	2769	867	0.8302636330805345	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	130	30	2537	12	27	45	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5107643-5109614	Cluster_3840	Pocillopora_meandrina_HIv1___Sc0000013	5107643	5109614	1972	5643	1475	0.939216728690413	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	460	26	5395	9	24	62	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5110149-5110886	Cluster_3841	Pocillopora_meandrina_HIv1___Sc0000013	5110149	5110886	738	312	138	0.9839743589743589	+	UCAUCUCGGUUUUUGCAAAAUGUCAA	15	1	282	2	6	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5111128-5111556	Cluster_3842	Pocillopora_meandrina_HIv1___Sc0000013	5111128	5111556	429	560	53	1.0	+	UGUGAGUUGAUGUUUGGUGGGAUACCU	194	4	553	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5111652-5112680	Cluster_3843	Pocillopora_meandrina_HIv1___Sc0000013	5111652	5112680	1029	4304	945	0.895910780669145	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	458	61	4028	24	19	61	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5112751-5113300	Cluster_3844	Pocillopora_meandrina_HIv1___Sc0000013	5112751	5113300	550	4260	559	0.5908450704225352	.	UCUGUCUUGUACUUCCAUUUCUUCAUUG	491	45	3946	4	39	80	146	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5114630-5115060	Cluster_3845	Pocillopora_meandrina_HIv1___Sc0000013	5114630	5115060	431	874	86	0.012585812356979404	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	500	0	853	0	1	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5116587-5118347	Cluster_3846	Pocillopora_meandrina_HIv1___Sc0000013	5116587	5118347	1761	2299	742	0.22270552414093084	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	95	24	2102	8	5	57	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5118827-5119253	Cluster_3847	Pocillopora_meandrina_HIv1___Sc0000013	5118827	5119253	427	141	62	0.0425531914893617	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	22	3	136	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5119308-5120041	Cluster_3848	Pocillopora_meandrina_HIv1___Sc0000013	5119308	5120041	734	1124	313	0.06316725978647687	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	134	7	1070	6	4	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5193170-5194947	Cluster_3849	Pocillopora_meandrina_HIv1___Sc0000013	5193170	5194947	1778	2846	1142	0.04356992269852424	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	94	22	2677	12	34	51	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5199542-5200166	Cluster_3850	Pocillopora_meandrina_HIv1___Sc0000013	5199542	5200166	625	968	401	0.03409090909090909	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	36	8	931	6	2	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5200187-5200864	Cluster_3851	Pocillopora_meandrina_HIv1___Sc0000013	5200187	5200864	678	603	298	0.12769485903814262	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	33	3	540	7	3	14	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5201147-5201896	Cluster_3852	Pocillopora_meandrina_HIv1___Sc0000013	5201147	5201896	750	782	233	0.026854219948849106	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	78	3	760	4	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5203239-5204089	Cluster_3853	Pocillopora_meandrina_HIv1___Sc0000013	5203239	5204089	851	1594	516	0.0959849435382685	-	UGAUUUAUAGGAGUAAUGAGACAUUAU	157	15	1466	23	19	18	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5204656-5206216	Cluster_3854	Pocillopora_meandrina_HIv1___Sc0000013	5204656	5206216	1561	2026	932	0.08588351431391905	-	UAUGAUAAAUACUUCUGCCUAGCUCCUGC	51	23	1831	6	9	81	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5206475-5207150	Cluster_3855	Pocillopora_meandrina_HIv1___Sc0000013	5206475	5207150	676	7936	561	0.003402217741935484	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2134	9	7806	4	46	30	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5207204-5208976	Cluster_3856	Pocillopora_meandrina_HIv1___Sc0000013	5207204	5208976	1773	9314	2373	0.07333047025982392	-	UGAUAGACUGCACGACGAUUUACGUCA	552	90	8490	72	68	250	344	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5212065-5212493	Cluster_3857	Pocillopora_meandrina_HIv1___Sc0000013	5212065	5212493	429	104	30	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	60	0	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5216419-5216850	Cluster_3858	Pocillopora_meandrina_HIv1___Sc0000013	5216419	5216850	432	394	150	0.08375634517766498	-	UGUUUUGGUGUGUUCAAGUAUCUUUGA	30	7	377	0	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5221124-5221549	Cluster_3859	Pocillopora_meandrina_HIv1___Sc0000013	5221124	5221549	426	135	38	0.26666666666666666	.	UGUACUUUCUUUGGGCCAUGUAAUCU	41	2	132	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5484731-5485161	Cluster_3860	Pocillopora_meandrina_HIv1___Sc0000013	5484731	5485161	431	218	33	0.9908256880733946	+	UGUGUGACUUUGUAUGUAUAUUGAGCGU	44	0	217	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5492193-5492621	Cluster_3861	Pocillopora_meandrina_HIv1___Sc0000013	5492193	5492621	429	188	95	0.0797872340425532	-	UAAUGAACGUAUAGCCAUCCAGUUGAACU	12	0	185	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5492633-5493056	Cluster_3862	Pocillopora_meandrina_HIv1___Sc0000013	5492633	5493056	424	157	94	0.21019108280254778	.	UUAACACUAUAAACAUUCUGAGGGCGAU	11	1	137	1	4	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5580444-5580871	Cluster_3863	Pocillopora_meandrina_HIv1___Sc0000013	5580444	5580871	428	104	27	0.038461538461538464	-	UGAACACGCUCUGAGAACUUGUUUUACG	43	0	102	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5586524-5587233	Cluster_3864	Pocillopora_meandrina_HIv1___Sc0000013	5586524	5587233	710	461	192	0.9609544468546638	+	UGUGUAGAUAUGUCUUUUGGACAGGA	29	7	437	4	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5587540-5588626	Cluster_3865	Pocillopora_meandrina_HIv1___Sc0000013	5587540	5588626	1087	3699	920	0.9786428764530954	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	133	33	3583	8	19	29	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5588764-5590015	Cluster_3866	Pocillopora_meandrina_HIv1___Sc0000013	5588764	5590015	1252	1701	493	0.9688418577307466	+	UGCAUUCUCAAGUCGUGCUCUGUAACGG	244	23	1579	6	17	26	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5590761-5592015	Cluster_3867	Pocillopora_meandrina_HIv1___Sc0000013	5590761	5592015	1255	1380	487	0.9630434782608696	+	UGAUUUGUACGACCCACUCCUGUUAAC	61	24	1295	9	8	15	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5595130-5595558	Cluster_3868	Pocillopora_meandrina_HIv1___Sc0000013	5595130	5595558	429	307	52	1.0	+	UGGGUUGAGUGAAUUUGUGAGGAAACUGA	131	5	288	3	4	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5595910-5596340	Cluster_3869	Pocillopora_meandrina_HIv1___Sc0000013	5595910	5596340	431	1100	127	1.0	+	UUCAUUCUGUAAUCUUCUCUAAGUCUAGA	219	6	1089	3	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5596710-5597139	Cluster_3870	Pocillopora_meandrina_HIv1___Sc0000013	5596710	5597139	430	420	82	0.9047619047619048	+	UGGACAAACAGUAACGUUACUAUUGCGGUU	135	2	408	1	5	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5735573-5736001	Cluster_3871	Pocillopora_meandrina_HIv1___Sc0000013	5735573	5736001	429	235	93	0.7191489361702128	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	95	13	208	3	5	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5934942-5935367	Cluster_3872	Pocillopora_meandrina_HIv1___Sc0000013	5934942	5935367	426	112	40	0.026785714285714284	-	UAUUUGCACCGUUUUUCUUGAAUAUAGA	25	0	105	0	0	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5936944-5937374	Cluster_3873	Pocillopora_meandrina_HIv1___Sc0000013	5936944	5937374	431	225	84	0.008888888888888889	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	28	3	211	0	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6078488-6078915	Cluster_3874	Pocillopora_meandrina_HIv1___Sc0000013	6078488	6078915	428	122	23	1.0	+	GCACCAAUCAGAGCUGUUGAAAAACAACA	44	2	117	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6097078-6097495	Cluster_3875	Pocillopora_meandrina_HIv1___Sc0000013	6097078	6097495	418	1191	17	0.008396305625524769	-	AACUUGAAGCGGUUGGAU	1146	1183	4	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6278312-6278738	Cluster_3876	Pocillopora_meandrina_HIv1___Sc0000013	6278312	6278738	427	128	69	0.3359375	.	UAGUCUAUCUCUUAACGCGUCAUUCAAG	20	1	117	1	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6284962-6285389	Cluster_3877	Pocillopora_meandrina_HIv1___Sc0000013	6284962	6285389	428	135	52	0.007407407407407408	-	UAAAGAACAAUUAAUUAUCUCUGCCAAG	40	0	135	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6305354-6305781	Cluster_3878	Pocillopora_meandrina_HIv1___Sc0000013	6305354	6305781	428	106	18	0.04716981132075472	-	AACUACUGCUCGUGCUCUAGAUAUGACA	61	0	104	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6319583-6320179	Cluster_3879	Pocillopora_meandrina_HIv1___Sc0000013	6319583	6320179	597	5683	507	0.0035192679922576102	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	831	12	5625	3	5	5	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6764524-6764941	Cluster_3880	Pocillopora_meandrina_HIv1___Sc0000013	6764524	6764941	418	105	56	1.0	+	UGACGAUUUUCGCGGCUCGAUUUUGU	13	1	103	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6783062-6783548	Cluster_3881	Pocillopora_meandrina_HIv1___Sc0000013	6783062	6783548	487	168	81	0.8095238095238095	+	CGGGAUCGAAAAACUAAAUUUUU	11	1	140	0	0	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6788017-6792416	Cluster_3882	Pocillopora_meandrina_HIv1___Sc0000013	6788017	6792416	4400	14779	3959	0.9326747411868191	+	UGACUCUUCAAUCUCUGAAACGACUGCUC	524	138	13838	42	70	260	431	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6839929-6840346	Cluster_3883	Pocillopora_meandrina_HIv1___Sc0000013	6839929	6840346	418	150	74	0.03333333333333333	-	UUGUUAACUUUGUCUACC	33	47	99	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6869967-6870391	Cluster_3884	Pocillopora_meandrina_HIv1___Sc0000013	6869967	6870391	425	287	158	0.34843205574912894	.	AGCGGUCUUCUCUUUUGUGC	16	179	9	58	33	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7305232-7305828	Cluster_3885	Pocillopora_meandrina_HIv1___Sc0000013	7305232	7305828	597	5703	528	0.003156233561283535	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	841	9	5653	5	5	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7340257-7341730	Cluster_3886	Pocillopora_meandrina_HIv1___Sc0000013	7340257	7341730	1474	971	467	0.29145211122554066	.	UCAGAACUUCAGUAGCAAUGUGCCUAUA	35	25	874	3	14	24	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7341786-7342214	Cluster_3887	Pocillopora_meandrina_HIv1___Sc0000013	7341786	7342214	429	314	177	0.4171974522292994	.	UCUGUCUUUGUGUUCUUACGGUACUUCA	14	10	261	6	15	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7345946-7346369	Cluster_3888	Pocillopora_meandrina_HIv1___Sc0000013	7345946	7346369	424	150	74	0.15333333333333332	-	UUGAACUGUUGCAUGCUUCCAUCAAACAU	14	1	129	0	0	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7347540-7348292	Cluster_3889	Pocillopora_meandrina_HIv1___Sc0000013	7347540	7348292	753	739	173	0.02165087956698241	-	UGUAAUACUUCAACAAGGGUGCCUCUGUC	168	3	727	1	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7348557-7349496	Cluster_3890	Pocillopora_meandrina_HIv1___Sc0000013	7348557	7349496	940	1138	330	0.040421792618629174	-	UCUUCCUCUUUACUGUUUCAGCUGGUAC	96	5	1075	9	13	17	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7352066-7352496	Cluster_3891	Pocillopora_meandrina_HIv1___Sc0000013	7352066	7352496	431	826	128	0.8946731234866828	+	UUGAGUUGUAUGACACUGGACGUAGAGA	130	2	629	0	5	130	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7354771-7355198	Cluster_3892	Pocillopora_meandrina_HIv1___Sc0000013	7354771	7355198	428	176	74	0.4602272727272727	.	UGUGAAAGCGGAAUUGCUCCACUAUGAGC	14	6	161	1	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7362821-7363225	Cluster_3893	Pocillopora_meandrina_HIv1___Sc0000013	7362821	7363225	405	71	21	0.0	-	UGAGAUCUUUUUUACCUAAGUUGUUUGGA	22	2	68	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7379717-7380725	Cluster_3894	Pocillopora_meandrina_HIv1___Sc0000013	7379717	7380725	1009	1815	627	0.0011019283746556473	-	UUCUCUGUUUACUGACUCCUUGUGGAAUGU	67	9	1767	3	18	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7384433-7384855	Cluster_3895	Pocillopora_meandrina_HIv1___Sc0000013	7384433	7384855	423	90	36	0.9444444444444444	+	UGUGUUUUCAAGGUCUGCAGCUGAUGU	18	0	90	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7386581-7387009	Cluster_3896	Pocillopora_meandrina_HIv1___Sc0000013	7386581	7387009	429	298	191	0.62751677852349	.	UUCUGAGCUCAUGGCACGUG	10	85	154	31	21	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7398727-7400680	Cluster_3897	Pocillopora_meandrina_HIv1___Sc0000013	7398727	7400680	1954	5198	1679	0.11812235475182763	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	368	45	4789	34	62	86	182	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7400687-7401215	Cluster_3898	Pocillopora_meandrina_HIv1___Sc0000013	7400687	7401215	529	363	182	0.15977961432506887	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	50	5	324	1	1	10	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7401232-7401658	Cluster_3899	Pocillopora_meandrina_HIv1___Sc0000013	7401232	7401658	427	194	85	0.0979381443298969	-	UGAACUUCUCGGCUCCAAACACUAUGG	62	2	178	0	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7401674-7402105	Cluster_3900	Pocillopora_meandrina_HIv1___Sc0000013	7401674	7402105	432	497	203	0.06841046277665996	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	56	3	465	5	0	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7402391-7403566	Cluster_3901	Pocillopora_meandrina_HIv1___Sc0000013	7402391	7403566	1176	927	348	0.05825242718446602	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	162	12	853	3	7	17	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7406044-7406903	Cluster_3902	Pocillopora_meandrina_HIv1___Sc0000013	7406044	7406903	860	1610	263	0.061490683229813665	-	UGAUCUGUAUCUGAUGAAAAGCUUCCUC	309	2	1597	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7421857-7422707	Cluster_3903	Pocillopora_meandrina_HIv1___Sc0000013	7421857	7422707	851	1417	490	0.11362032462949895	-	UGUGAAUAUCCAUUUGCUUUGACUGGC	132	21	1304	19	31	12	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7423262-7425037	Cluster_3904	Pocillopora_meandrina_HIv1___Sc0000013	7423262	7425037	1776	2645	1156	0.08809073724007561	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	70	22	2435	16	23	83	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7430118-7430544	Cluster_3905	Pocillopora_meandrina_HIv1___Sc0000013	7430118	7430544	427	125	40	0.0	-	UUGGUAACGACUUUCCGGAAAUUUCGGCU	23	0	124	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7431062-7432829	Cluster_3906	Pocillopora_meandrina_HIv1___Sc0000013	7431062	7432829	1768	22700	2580	0.16955947136563876	-	UCCGGUCAAUGUUUAGAGAGCUGAAUAA	1429	130	21436	74	121	222	717	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7433202-7433630	Cluster_3907	Pocillopora_meandrina_HIv1___Sc0000013	7433202	7433630	429	361	132	0.7202216066481995	.	UAGGACAAUUAGCAUUACAGCAGCUU	25	1	326	6	7	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7433650-7435148	Cluster_3908	Pocillopora_meandrina_HIv1___Sc0000013	7433650	7435148	1499	1424	567	0.3707865168539326	.	CGAUUUCUUAUGUUCAUGCGACUGUUGUG	72	21	1248	13	26	32	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7436254-7436878	Cluster_3909	Pocillopora_meandrina_HIv1___Sc0000013	7436254	7436878	625	997	404	0.03911735205616851	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	33	8	946	11	4	9	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7436899-7437564	Cluster_3910	Pocillopora_meandrina_HIv1___Sc0000013	7436899	7437564	666	592	307	0.11317567567567567	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	27	3	532	1	3	9	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7437859-7438607	Cluster_3911	Pocillopora_meandrina_HIv1___Sc0000013	7437859	7438607	749	759	263	0.030303030303030304	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	79	4	737	3	1	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7441299-7442030	Cluster_3912	Pocillopora_meandrina_HIv1___Sc0000013	7441299	7442030	732	441	242	0.0022675736961451248	-	UGUGUGUCAAAGCUGAACUUAAAGAGCUC	28	3	427	0	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7444686-7445113	Cluster_3913	Pocillopora_meandrina_HIv1___Sc0000013	7444686	7445113	428	90	18	0.0	-	UGAAUCGUGUCUUUAGCCAUUUGACUUGC	33	1	89	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7453585-7454507	Cluster_3914	Pocillopora_meandrina_HIv1___Sc0000013	7453585	7454507	923	5465	860	0.005306495882891125	-	UGAUCACUUGGAGGGUUUGCACUCGGAG	766	44	5271	14	23	56	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7507701-7508131	Cluster_3915	Pocillopora_meandrina_HIv1___Sc0000013	7507701	7508131	431	319	139	0.0438871473354232	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	19	2	304	1	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7508147-7508574	Cluster_3916	Pocillopora_meandrina_HIv1___Sc0000013	7508147	7508574	428	242	135	0.1446280991735537	-	UACUGAUAGUGAAACUGCUCCUUGAACCUC	11	4	228	0	0	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7511230-7511659	Cluster_3917	Pocillopora_meandrina_HIv1___Sc0000013	7511230	7511659	430	84	22	0.011904761904761904	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	30	0	83	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7522996-7523424	Cluster_3918	Pocillopora_meandrina_HIv1___Sc0000013	7522996	7523424	429	199	72	0.005025125628140704	-	UAAUAACGACUGCCUUUACUGAAUGGGUC	43	0	197	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7527066-7527697	Cluster_3919	Pocillopora_meandrina_HIv1___Sc0000013	7527066	7527697	632	310	140	0.041935483870967745	-	UCAUCUCGGUUUUUGCAAAAUGUCAA	16	2	280	0	4	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7528338-7530310	Cluster_3920	Pocillopora_meandrina_HIv1___Sc0000013	7528338	7530310	1973	5746	1504	0.06247824573616429	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	502	29	5510	11	28	54	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7533025-7533812	Cluster_3921	Pocillopora_meandrina_HIv1___Sc0000013	7533025	7533812	788	748	263	0.05748663101604278	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	51	2	714	3	10	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7535004-7535413	Cluster_3922	Pocillopora_meandrina_HIv1___Sc0000013	7535004	7535413	410	183	85	0.6338797814207651	.	UGAUAUUUUUGACCGGGCAAAAAGAAUUA	15	3	177	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7535593-7536021	Cluster_3923	Pocillopora_meandrina_HIv1___Sc0000013	7535593	7536021	429	373	94	0.9329758713136729	+	UGCAGAUCCAGGGAAAUCACAAUUGACG	85	1	366	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7541850-7543172	Cluster_3924	Pocillopora_meandrina_HIv1___Sc0000013	7541850	7543172	1323	1575	706	0.07174603174603175	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	42	9	1485	3	4	21	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7543455-7544206	Cluster_3925	Pocillopora_meandrina_HIv1___Sc0000013	7543455	7544206	752	802	254	0.02493765586034913	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	76	1	783	2	2	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7546244-7547421	Cluster_3926	Pocillopora_meandrina_HIv1___Sc0000013	7546244	7547421	1178	12485	2084	0.08930716860232278	-	UGAUUUAAGAUCCAUUUGGAAGUUGCUG	581	158	11825	70	88	146	198	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7551768-7552195	Cluster_3927	Pocillopora_meandrina_HIv1___Sc0000013	7551768	7552195	428	200	31	0.075	-	UGGGUCUACUUCGAAUUCAUCGUUGUU	83	0	191	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7559048-7559474	Cluster_3928	Pocillopora_meandrina_HIv1___Sc0000013	7559048	7559474	427	292	138	0.0547945205479452	-	UGCAAACUUUAGCAAAGUGUCGGAUGUG	34	2	272	3	0	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7559613-7560998	Cluster_3929	Pocillopora_meandrina_HIv1___Sc0000013	7559613	7560998	1386	9053	1020	0.045730697006517176	-	UGAAGAACUUGGUCGAUUACAUGUUGAUA	4416	40	8712	32	33	62	174	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7561746-7562427	Cluster_3930	Pocillopora_meandrina_HIv1___Sc0000013	7561746	7562427	682	1488	260	0.03293010752688172	-	UAAUAUCUGCUGUAGUAGUCAACAACUAC	334	7	1444	3	8	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7585879-7586309	Cluster_3931	Pocillopora_meandrina_HIv1___Sc0000013	7585879	7586309	431	1347	120	0.002969561989606533	-	UGGGUUGAGUGAAUUUUUAAGGAAAUUAAA	478	25	1171	9	102	26	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7589860-7590544	Cluster_3932	Pocillopora_meandrina_HIv1___Sc0000013	7589860	7590544	685	677	140	0.0	-	UGCUUCCUGAACAUGUGUUGCUAGAGUGGA	188	8	633	2	27	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7605446-7605875	Cluster_3933	Pocillopora_meandrina_HIv1___Sc0000013	7605446	7605875	430	182	93	0.02197802197802198	-	UUGGUGUAACCACAGCUGUCUUCCAUUUUGA	38	4	172	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7605908-7606438	Cluster_3934	Pocillopora_meandrina_HIv1___Sc0000013	7605908	7606438	531	584	259	0.023972602739726026	-	UCUACAUAACUCUGAGUGCUGCAUUUCUGU	33	7	524	2	5	32	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7606713-7608654	Cluster_3935	Pocillopora_meandrina_HIv1___Sc0000013	7606713	7608654	1942	3897	1353	0.0405440082114447	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	91	28	3689	9	27	68	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7611226-7612443	Cluster_3936	Pocillopora_meandrina_HIv1___Sc0000013	7611226	7612443	1218	1697	754	0.41072480848556275	.	UCAAGGAUAACUAACUCAUGGCUGAGAUU	51	19	1427	15	16	70	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7615407-7615924	Cluster_3937	Pocillopora_meandrina_HIv1___Sc0000013	7615407	7615924	518	683	288	0.15666178623718888	-	UCAUCUGGUGUGAUUGUAUCGUGUGCAC	33	3	607	10	11	17	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7616597-7617436	Cluster_3938	Pocillopora_meandrina_HIv1___Sc0000013	7616597	7617436	840	467	217	0.1670235546038544	-	UGAGAUCUUUUUAGCUUGAGUUUGUUGA	61	3	437	4	2	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7617490-7618192	Cluster_3939	Pocillopora_meandrina_HIv1___Sc0000013	7617490	7618192	703	601	270	0.1264559068219634	-	UGAAUGAUCUAUCUCGGCAAGUGUACAG	31	11	556	3	6	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7622384-7623212	Cluster_3940	Pocillopora_meandrina_HIv1___Sc0000013	7622384	7623212	829	1587	362	0.013862633900441084	-	UGUUUAUUGUGCGAACUCGACUGCCGCCAC	215	2	1557	4	2	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7624500-7625003	Cluster_3941	Pocillopora_meandrina_HIv1___Sc0000013	7624500	7625003	504	994	210	0.052313883299798795	-	UGAUAGGACUAAGAGUAUGGUUGAAACC	202	9	919	11	6	25	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7625148-7625559	Cluster_3942	Pocillopora_meandrina_HIv1___Sc0000013	7625148	7625559	412	245	156	0.044897959183673466	-	UCCUUCUGAAAUGUUUAAGCUAAGGCUU	11	3	228	1	4	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7636106-7636536	Cluster_3943	Pocillopora_meandrina_HIv1___Sc0000013	7636106	7636536	431	477	168	0.0	-	UGUAUUACUGGAGUAAGUUAGAUCAUCGUCC	73	40	420	7	0	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7637219-7638133	Cluster_3944	Pocillopora_meandrina_HIv1___Sc0000013	7637219	7638133	915	1345	389	0.017100371747211896	-	UGAAGUCUACCAUUCUCUGACAAAUCGUC	159	5	1290	8	9	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7639344-7639773	Cluster_3945	Pocillopora_meandrina_HIv1___Sc0000013	7639344	7639773	430	185	77	0.0	-	UCUUCUACUGUUGUGUCUUGUGGAGCACUC	18	1	183	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7644064-7644890	Cluster_3946	Pocillopora_meandrina_HIv1___Sc0000013	7644064	7644890	827	289	46	0.0	-	UUCAUCUGUUUAAGCUUUGAAAUCUUUGC	98	0	284	0	0	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7647433-7648695	Cluster_3947	Pocillopora_meandrina_HIv1___Sc0000013	7647433	7648695	1263	11195	1389	0.9799017418490398	+	UCUGACUGACUAACAGGAUAUCUGCUUC	772	48	10902	24	34	75	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7757601-7758021	Cluster_3948	Pocillopora_meandrina_HIv1___Sc0000013	7757601	7758021	421	151	56	0.013245033112582781	-	UCCGGCUCGAAGGAAACUUUU	26	64	27	36	2	16	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7936753-7937170	Cluster_3949	Pocillopora_meandrina_HIv1___Sc0000013	7936753	7937170	418	78	17	0.08974358974358974	-	CCUGACUGGCGCCGACACA	33	75	1	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8128876-8129305	Cluster_3950	Pocillopora_meandrina_HIv1___Sc0000013	8128876	8129305	430	598	60	0.005016722408026756	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	281	0	595	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8130059-8130655	Cluster_3951	Pocillopora_meandrina_HIv1___Sc0000013	8130059	8130655	597	5703	485	0.004559004032965106	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	898	11	5636	5	6	11	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8200834-8201251	Cluster_3952	Pocillopora_meandrina_HIv1___Sc0000013	8200834	8201251	418	546	26	0.0	-	CUUGAAGCGGUUGGA	349	546	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8279316-8279798	Cluster_3953	Pocillopora_meandrina_HIv1___Sc0000013	8279316	8279798	483	3121	328	0.0	-	CAUAGACGCAAGCUCAAUACACA	1043	177	202	122	1057	1260	303	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8350706-8351129	Cluster_3954	Pocillopora_meandrina_HIv1___Sc0000013	8350706	8351129	424	385	44	1.0	+	UGUCAGUGAAGUUGAUAUGAGU	107	57	6	28	174	12	108	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8717883-8718310	Cluster_3955	Pocillopora_meandrina_HIv1___Sc0000013	8717883	8718310	428	112	32	0.0	-	AAGUAUAGCACUGUGUAUUCUUUAGGAG	23	0	105	0	0	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8718535-8719582	Cluster_3956	Pocillopora_meandrina_HIv1___Sc0000013	8718535	8719582	1048	1216	372	0.39473684210526316	.	UGAGAAUUCUGGAAUUUAUGACAACUCC	67	16	1135	14	12	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8784465-8784953	Cluster_3957	Pocillopora_meandrina_HIv1___Sc0000013	8784465	8784953	489	461	188	0.8199566160520607	+	UAUGUGAUGCGGUGACCAGACAACGGUGGC	20	5	401	6	7	15	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8948806-8949223	Cluster_3958	Pocillopora_meandrina_HIv1___Sc0000013	8948806	8949223	418	159	18	1.0	+	CAGCACUCUGCAAAGACG	77	147	12	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9076660-9078397	Cluster_3959	Pocillopora_meandrina_HIv1___Sc0000013	9076660	9078397	1738	2779	1080	0.04174163368118028	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	87	20	2643	12	26	42	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9180154-9180831	Cluster_3960	Pocillopora_meandrina_HIv1___Sc0000013	9180154	9180831	678	8118	536	0.003572308450357231	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2199	7	7993	7	48	29	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9180909-9181394	Cluster_3961	Pocillopora_meandrina_HIv1___Sc0000013	9180909	9181394	486	363	231	0.19008264462809918	-	UCUUUCAGUCACUUAGAAGCCUCCAGG	12	11	302	4	6	19	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9289978-9290404	Cluster_3962	Pocillopora_meandrina_HIv1___Sc0000013	9289978	9290404	427	215	41	0.9953488372093023	+	UAAUCGUUGGCUUUUUCUCGAGGCGUG	78	1	213	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9301023-9301721	Cluster_3963	Pocillopora_meandrina_HIv1___Sc0000013	9301023	9301721	699	3555	396	0.9676511954992968	+	UCGUAUUCUUUUCCAUCCUCGCCGAAC	905	17	3297	38	79	45	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9512978-9513626	Cluster_3964	Pocillopora_meandrina_HIv1___Sc0000013	9512978	9513626	649	523	231	0.7112810707456979	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	39	2	471	0	3	20	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9530869-9531293	Cluster_3965	Pocillopora_meandrina_HIv1___Sc0000013	9530869	9531293	425	76	21	0.0	-	GCUUGAUGUACGCGAAAGAAAUUCGA	20	2	73	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9653262-9653875	Cluster_3966	Pocillopora_meandrina_HIv1___Sc0000013	9653262	9653875	614	1988	344	0.05432595573440644	-	UGAGACUCUUUGAAGCGCAACCCGCACA	536	15	1893	4	5	27	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9815081-9815510	Cluster_3967	Pocillopora_meandrina_HIv1___Sc0000013	9815081	9815510	430	177	57	1.0	+	AAGUGAUUAAAGAUGAGCUGAACCCAGUG	27	4	170	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:12879-13299	Cluster_3968	Pocillopora_meandrina_HIv1___Sc0000014	12879	13299	421	82	23	0.0	-	CUUGAAUCGUUUGGACUGCGCCA	29	4	0	13	22	36	7	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:45179-45605	Cluster_3969	Pocillopora_meandrina_HIv1___Sc0000014	45179	45605	427	237	164	0.43037974683544306	.	UCGAGUGGAGACGUCGGCGAGU	8	89	55	44	26	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:84566-84988	Cluster_3970	Pocillopora_meandrina_HIv1___Sc0000014	84566	84988	423	402	73	0.7910447761194029	.	UGUGCAGGUAGAGCAGAGGUUA	69	62	5	124	141	56	14	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:96182-96699	Cluster_3971	Pocillopora_meandrina_HIv1___Sc0000014	96182	96699	518	439	145	0.2642369020501139	.	UUCGCGUCUGAAGCUGUUAGAGU	109	71	71	23	61	203	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:137727-138140	Cluster_3972	Pocillopora_meandrina_HIv1___Sc0000014	137727	138140	414	114	48	0.15789473684210525	-	AAUGAUUUCGGAGUGUAUGCG	19	55	0	44	8	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:428538-428967	Cluster_3973	Pocillopora_meandrina_HIv1___Sc0000014	428538	428967	430	126	35	0.0	-	UUAGUAACUUCUUGGCUAUCUUUACAGCAU	41	0	126	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:465769-467126	Cluster_3974	Pocillopora_meandrina_HIv1___Sc0000014	465769	467126	1358	1887	548	0.5786963434022258	.	UGUGUAAUCGUUCGGUGUAAUCUUGUGUU	111	6	1830	7	9	17	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:467823-468252	Cluster_3975	Pocillopora_meandrina_HIv1___Sc0000014	467823	468252	430	354	50	0.0	-	UUCCAUGACUCUGUUUAAACGAAAACGAAC	212	1	351	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:489097-489920	Cluster_3976	Pocillopora_meandrina_HIv1___Sc0000014	489097	489920	824	355	181	0.05352112676056338	-	UGAAUCUGGAUAUUGCUCUCCUCUUUAUGUC	25	4	338	2	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:489970-490592	Cluster_3977	Pocillopora_meandrina_HIv1___Sc0000014	489970	490592	623	783	306	0.11494252873563218	-	UUUAACACAGUUGGCUUUAUGAAUUUCCCU	37	13	737	3	9	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:512220-512756	Cluster_3978	Pocillopora_meandrina_HIv1___Sc0000014	512220	512756	537	2671	519	1.0	+	GUGAUGUAUAAUUCAGAGACAUUU	453	107	1503	112	76	149	724	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:516209-516686	Cluster_3979	Pocillopora_meandrina_HIv1___Sc0000014	516209	516686	478	266	112	1.0	+	UUGAUAUCGAAUCCAGAAACAGGU	26	43	67	41	25	35	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:660803-661232	Cluster_3980	Pocillopora_meandrina_HIv1___Sc0000014	660803	661232	430	100	21	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	0	99	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:700715-701118	Cluster_3981	Pocillopora_meandrina_HIv1___Sc0000014	700715	701118	404	132	80	1.0	+	CAUGUGACUGAGGGGGCA	14	57	22	25	10	13	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:701482-702103	Cluster_3982	Pocillopora_meandrina_HIv1___Sc0000014	701482	702103	622	4246	696	1.0	+	AAUUCGUAGUGGUAUUCUGAUGUGA	228	1066	1863	264	236	376	441	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:764543-764990	Cluster_3983	Pocillopora_meandrina_HIv1___Sc0000014	764543	764990	448	2153	206	1.0	+	UAGGGCUGAGAUGAAGUCUCUCGUU	269	687	607	66	310	85	398	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:805530-805955	Cluster_3984	Pocillopora_meandrina_HIv1___Sc0000014	805530	805955	426	297	102	0.8215488215488216	+	UUUUGUAUCUGGAUUCCUUGACAUCU	39	7	248	8	9	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:806678-807105	Cluster_3985	Pocillopora_meandrina_HIv1___Sc0000014	806678	807105	428	130	48	0.9461538461538461	+	AAGGAUACCACAUUCGGAAGUAUAAGAGA	42	2	118	2	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:838169-838597	Cluster_3986	Pocillopora_meandrina_HIv1___Sc0000014	838169	838597	429	155	69	0.0064516129032258064	-	UCUUUCGUCUGUUGUCGAUAAAUGAGAGC	27	4	149	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:881327-881750	Cluster_3987	Pocillopora_meandrina_HIv1___Sc0000014	881327	881750	424	302	44	0.07947019867549669	-	UGUGACAAGAUUUUUCCUGAUGU	104	1	19	7	18	162	95	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1068863-1069286	Cluster_3988	Pocillopora_meandrina_HIv1___Sc0000014	1068863	1069286	424	200	102	0.915	+	UAAGAUUCCAAGAUAUUUAAAACAAGUAAC	14	0	180	0	3	1	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1099106-1100430	Cluster_3989	Pocillopora_meandrina_HIv1___Sc0000014	1099106	1100430	1325	1603	719	0.07985028072364317	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	38	12	1481	9	6	18	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1100711-1101459	Cluster_3990	Pocillopora_meandrina_HIv1___Sc0000014	1100711	1101459	749	858	273	0.022144522144522144	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	94	0	844	2	0	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1121523-1122112	Cluster_3991	Pocillopora_meandrina_HIv1___Sc0000014	1121523	1122112	590	197	84	0.8071065989847716	+	AAUUGACUGCUUUGAGAUUUUUAUUGAGA	31	1	192	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1134417-1135055	Cluster_3992	Pocillopora_meandrina_HIv1___Sc0000014	1134417	1135055	639	546	271	0.5476190476190477	.	CAGGUUCUGAGCCUUCUGACUGACCAGGUC	63	8	513	9	5	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1307073-1307494	Cluster_3993	Pocillopora_meandrina_HIv1___Sc0000014	1307073	1307494	422	159	77	0.9685534591194969	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	14	0	154	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1451321-1451767	Cluster_3994	Pocillopora_meandrina_HIv1___Sc0000014	1451321	1451767	447	497	88	0.5291750503018109	.	UCGGUUAUAAGACGCACCCUGAAUUUUU	140	3	487	4	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1452037-1452460	Cluster_3995	Pocillopora_meandrina_HIv1___Sc0000014	1452037	1452460	424	125	21	0.056	-	UUAACUGGUAGUCAUGACGUCUCC	50	6	13	0	1	5	100	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1658721-1659147	Cluster_3996	Pocillopora_meandrina_HIv1___Sc0000014	1658721	1659147	427	196	84	0.9540816326530612	+	UGUAGACGUUUGAUCAGUAUAUCAUGAU	12	2	189	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1698695-1699129	Cluster_3997	Pocillopora_meandrina_HIv1___Sc0000014	1698695	1699129	435	538	81	0.9776951672862454	+	UCAGUAGAACACAACUGUCAAGAAGCCACA	179	29	499	3	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1701276-1701705	Cluster_3998	Pocillopora_meandrina_HIv1___Sc0000014	1701276	1701705	430	232	51	1.0	+	UGGAGACUGUUUCAAUUUCUCAUCGAAAUA	120	2	220	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1705301-1705720	Cluster_3999	Pocillopora_meandrina_HIv1___Sc0000014	1705301	1705720	420	119	54	1.0	+	UCCGAUGUCCAUGUCAUGAUUAACAGAAG	15	0	118	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1708938-1710452	Cluster_4000	Pocillopora_meandrina_HIv1___Sc0000014	1708938	1710452	1515	3352	591	0.9979116945107399	+	UAAUAGAAUUUUCAUCAACUUCAAGAGU	683	21	3269	14	12	29	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1715489-1716088	Cluster_4001	Pocillopora_meandrina_HIv1___Sc0000014	1715489	1716088	600	669	225	0.9985052316890882	+	UGAAGUCCAGAUCAUCUUGCUGUAGAAGUU	198	8	646	2	8	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1718239-1718664	Cluster_4002	Pocillopora_meandrina_HIv1___Sc0000014	1718239	1718664	426	107	39	1.0	+	UCCGAUACUGAACACUCCGAUCACUG	28	0	105	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1719216-1719928	Cluster_4003	Pocillopora_meandrina_HIv1___Sc0000014	1719216	1719928	713	1180	281	1.0	+	GGCUUCUAGGACUUCUAUGUGGAUGGCU	101	12	1097	6	21	20	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1720058-1720588	Cluster_4004	Pocillopora_meandrina_HIv1___Sc0000014	1720058	1720588	531	463	127	0.9978401727861771	+	UGAAUUCUCUGACCAAGACGAUAAGAUUGGC	103	4	398	0	0	57	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1721685-1722209	Cluster_4005	Pocillopora_meandrina_HIv1___Sc0000014	1721685	1722209	525	355	144	0.9971830985915493	+	UGCUUUAUCUCUAGAGCCAUGAACUUGAAG	32	3	338	0	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1725116-1725543	Cluster_4006	Pocillopora_meandrina_HIv1___Sc0000014	1725116	1725543	428	185	75	1.0	+	UGUAUCUGUAGUGCAUCCUUCGAUUGAGU	16	0	178	3	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1726849-1727274	Cluster_4007	Pocillopora_meandrina_HIv1___Sc0000014	1726849	1727274	426	141	51	1.0	+	UGCAAGUUCUGGUUUGGUUUUGUUUGAAUC	45	3	132	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1730237-1730740	Cluster_4008	Pocillopora_meandrina_HIv1___Sc0000014	1730237	1730740	504	2120	428	0.9971698113207547	+	UCUUCUCGAUCUGGCUAAAGUCUGUGUC	186	5	2071	4	4	8	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1736983-1737940	Cluster_4009	Pocillopora_meandrina_HIv1___Sc0000014	1736983	1737940	958	1778	377	0.9915635545556806	+	UGGAAUUGGUAGUUCAUUAAAAGCAGGUG	283	14	1689	2	8	14	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1740024-1742285	Cluster_4010	Pocillopora_meandrina_HIv1___Sc0000014	1740024	1742285	2262	6943	2240	0.9209275529310097	+	UAUGUACGAUUUUAACUGGAAGAAACGUU	192	150	6450	27	45	128	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1750909-1751877	Cluster_4011	Pocillopora_meandrina_HIv1___Sc0000014	1750909	1751877	969	808	330	0.875	+	UGUUCCAAUAUUUUUCGGUCGAGAUCCACU	47	15	744	15	11	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1751983-1752677	Cluster_4012	Pocillopora_meandrina_HIv1___Sc0000014	1751983	1752677	695	2091	498	0.8837876614060258	+	UGUAUGGUUUCUGCUCGUUCUCUCCACA	377	44	1894	13	16	62	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1753796-1754299	Cluster_4013	Pocillopora_meandrina_HIv1___Sc0000014	1753796	1754299	504	1645	132	0.9993920972644377	+	UCAACCAAGCCUUAGAUCAUUCAGUCUGUG	328	5	1616	2	7	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1761367-1762938	Cluster_4014	Pocillopora_meandrina_HIv1___Sc0000014	1761367	1762938	1572	2293	995	0.9319668556476232	+	UAGGAUCAUAGUCUUUGAACUCCGACGG	84	17	2093	13	13	90	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1763494-1764344	Cluster_4015	Pocillopora_meandrina_HIv1___Sc0000014	1763494	1764344	851	1587	501	0.8985507246376812	+	UGAUUUAUAGGAGUAAUGAGACAUUAU	124	20	1450	21	27	19	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1766207-1766925	Cluster_4016	Pocillopora_meandrina_HIv1___Sc0000014	1766207	1766925	719	1109	248	0.933273219116321	+	UGCAUCAUCGAUUCGUAAACUGUGCCAAUG	339	3	1075	1	4	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1770787-1771217	Cluster_4017	Pocillopora_meandrina_HIv1___Sc0000014	1770787	1771217	431	560	77	0.9928571428571429	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	250	1	556	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1775329-1775777	Cluster_4018	Pocillopora_meandrina_HIv1___Sc0000014	1775329	1775777	449	1077	152	0.8895078922934077	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	386	15	1039	3	3	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1778202-1778631	Cluster_4019	Pocillopora_meandrina_HIv1___Sc0000014	1778202	1778631	430	351	45	0.9971509971509972	+	UUCCAUGACUCUGUUUAAACGAAAACGAAC	212	0	350	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1779599-1780027	Cluster_4020	Pocillopora_meandrina_HIv1___Sc0000014	1779599	1780027	429	136	48	1.0	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	17	0	132	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1780550-1780998	Cluster_4021	Pocillopora_meandrina_HIv1___Sc0000014	1780550	1780998	449	434	193	0.8225806451612904	+	UAUGACGUUCCAGAAUCUUUGACAAAA	42	3	413	2	3	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1781168-1781905	Cluster_4022	Pocillopora_meandrina_HIv1___Sc0000014	1781168	1781905	738	838	298	0.9618138424821002	+	UCCGUGACACAACGACUUUGCCUUGCUU	123	12	816	1	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1786396-1786799	Cluster_4023	Pocillopora_meandrina_HIv1___Sc0000014	1786396	1786799	404	191	91	0.6492146596858639	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	29	3	172	1	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1788267-1788697	Cluster_4024	Pocillopora_meandrina_HIv1___Sc0000014	1788267	1788697	431	339	38	1.0	+	UGUAAUCGUAACGUUCUUUCAUGAUAAA	62	4	330	1	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1791429-1791857	Cluster_4025	Pocillopora_meandrina_HIv1___Sc0000014	1791429	1791857	429	118	48	1.0	+	GGGUUCAAGGAUUUUAGUGAACAGCCUAGG	17	0	113	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1792562-1793420	Cluster_4026	Pocillopora_meandrina_HIv1___Sc0000014	1792562	1793420	859	525	203	1.0	+	UCCUGAACCUGUUGGAAAGCCAAAUCCAC	41	2	509	4	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1795665-1796092	Cluster_4027	Pocillopora_meandrina_HIv1___Sc0000014	1795665	1796092	428	197	86	0.9949238578680203	+	UGAUGUUGUUGGGAUGAAGUCUUCAAUG	41	4	188	1	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1796852-1797273	Cluster_4028	Pocillopora_meandrina_HIv1___Sc0000014	1796852	1797273	422	199	95	0.9949748743718593	+	UCUGAUCUGUCACGGAUGUGGUGUACGC	23	3	194	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1798773-1799503	Cluster_4029	Pocillopora_meandrina_HIv1___Sc0000014	1798773	1799503	731	682	99	0.9750733137829912	+	UGAUUGAUAAACCGGAUGCUGUAGACGU	391	6	668	5	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1799524-1799972	Cluster_4030	Pocillopora_meandrina_HIv1___Sc0000014	1799524	1799972	449	1243	137	0.1898632341110217	-	AAGUAAACGAGGUGUUUAAUGUGCGACUCC	444	12	1204	2	0	8	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1800456-1801181	Cluster_4031	Pocillopora_meandrina_HIv1___Sc0000014	1800456	1801181	726	578	281	0.7318339100346021	.	UGAGGAAUGACGCUGUGAAAGUUUUGAGA	18	18	519	3	9	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1814534-1816182	Cluster_4032	Pocillopora_meandrina_HIv1___Sc0000014	1814534	1816182	1649	3209	902	0.9943907759426612	+	UGAAUCUCAUCUUAUCUUCUACUUCAACAUC	192	49	3067	24	13	17	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1816807-1817310	Cluster_4033	Pocillopora_meandrina_HIv1___Sc0000014	1816807	1817310	504	266	108	0.943609022556391	+	UGAUAUUGUACAAUCUGGCUUUUUUUGAC	42	2	242	2	3	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1818058-1818483	Cluster_4034	Pocillopora_meandrina_HIv1___Sc0000014	1818058	1818483	426	153	60	0.9934640522875817	+	UGCAUUUCUCUGAACCAAACUCCACAAAGUG	17	1	152	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1819516-1820201	Cluster_4035	Pocillopora_meandrina_HIv1___Sc0000014	1819516	1820201	686	249	131	0.9879518072289156	+	UUAUGGAUCUAUGCUUUUGCGACACAAAU	10	4	236	2	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1823340-1825380	Cluster_4036	Pocillopora_meandrina_HIv1___Sc0000014	1823340	1825380	2041	6928	1633	0.5200635103926097	.	AAAUCUCCUAAAUCUUUGACACAAAUAGA	354	75	5720	43	134	483	473	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1835687-1836563	Cluster_4037	Pocillopora_meandrina_HIv1___Sc0000014	1835687	1836563	877	1268	369	0.5354889589905363	.	UACGUUGCUUGACCUCAUCAUUUUUGG	79	14	1189	22	5	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1849056-1849484	Cluster_4038	Pocillopora_meandrina_HIv1___Sc0000014	1849056	1849484	429	149	42	0.912751677852349	+	UUGGAUUUGCGUAAAAAAGUAAAAAAUGC	67	0	147	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1849835-1850267	Cluster_4039	Pocillopora_meandrina_HIv1___Sc0000014	1849835	1850267	433	314	111	0.9840764331210191	+	UUAGACGAUCUAGCUUCUGACUUGGUAGA	18	2	308	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1858886-1859310	Cluster_4040	Pocillopora_meandrina_HIv1___Sc0000014	1858886	1859310	425	163	108	0.8220858895705522	+	UAACACUAUAAACAUUCUGAGGGCGAUU	8	1	146	4	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1859321-1859748	Cluster_4041	Pocillopora_meandrina_HIv1___Sc0000014	1859321	1859748	428	179	95	0.8603351955307262	+	UAAUGAACGUAUAGCCAUCCAGUUGAACU	14	3	166	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1872858-1873287	Cluster_4042	Pocillopora_meandrina_HIv1___Sc0000014	1872858	1873287	430	237	85	0.9957805907172996	+	UAGGAUGUAUCUGGACGUGUUCUGCACAGU	49	5	228	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1893198-1893619	Cluster_4043	Pocillopora_meandrina_HIv1___Sc0000014	1893198	1893619	422	183	23	1.0	+	AAGACUACAAAUUGCACAUGCC	74	13	2	19	117	30	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1980438-1980862	Cluster_4044	Pocillopora_meandrina_HIv1___Sc0000014	1980438	1980862	425	122	65	0.9426229508196722	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	26	1	116	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1981949-1982375	Cluster_4045	Pocillopora_meandrina_HIv1___Sc0000014	1981949	1982375	427	131	80	0.8702290076335878	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	15	1	115	2	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1982864-1983267	Cluster_4046	Pocillopora_meandrina_HIv1___Sc0000014	1982864	1983267	404	133	75	0.8421052631578947	+	UACUGGAAUAAUAACUUUACGAUCAACA	12	0	123	1	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1983712-1984120	Cluster_4047	Pocillopora_meandrina_HIv1___Sc0000014	1983712	1984120	409	131	77	0.8854961832061069	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	12	1	118	0	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2079375-2079803	Cluster_4048	Pocillopora_meandrina_HIv1___Sc0000014	2079375	2079803	429	361	37	0.00554016620498615	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	270	0	358	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2079926-2080341	Cluster_4049	Pocillopora_meandrina_HIv1___Sc0000014	2079926	2080341	416	165	111	0.5878787878787879	.	AAUUACCUGAUUUCGAUUUUCGUCA	9	3	133	2	2	3	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2108222-2108651	Cluster_4050	Pocillopora_meandrina_HIv1___Sc0000014	2108222	2108651	430	213	46	1.0	+	AUGGAUGAUGAGAAGGAGAUGCUCUGAGG	66	27	166	10	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2117321-2117735	Cluster_4051	Pocillopora_meandrina_HIv1___Sc0000014	2117321	2117735	415	133	74	0.13533834586466165	-	UCCGUGACUUGAUGGAGAACGAAUAAUUCG	16	9	119	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2121053-2121458	Cluster_4052	Pocillopora_meandrina_HIv1___Sc0000014	2121053	2121458	406	92	44	0.0	-	UGCUGUUUUGAUCUGCAAGAUUGGUGAUGG	15	8	77	1	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2179577-2180006	Cluster_4053	Pocillopora_meandrina_HIv1___Sc0000014	2179577	2180006	430	201	44	0.900497512437811	+	UAAUCGUUGGCUUUUUCUCGAGACGUGAGC	69	6	192	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2259034-2259461	Cluster_4054	Pocillopora_meandrina_HIv1___Sc0000014	2259034	2259461	428	208	102	0.30288461538461536	.	UUCAAUCUGAUCCGUGUAACUGGGACUU	14	1	158	14	12	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2366038-2366132	Cluster_4055	Pocillopora_meandrina_HIv1___Sc0000014	2366038	2366132	95	1393	67	0.0	-	AUUUUUAGCCCGCGGAAGUUGC	641	54	1	97	930	301	10	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000014:2594743-2594833	Cluster_4056	Pocillopora_meandrina_HIv1___Sc0000014	2594743	2594833	91	329	44	0.9969604863221885	+	CGUGGUGCGUUAUUGUUUCGGU	54	60	0	17	167	49	36	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000014:2614195-2614653	Cluster_4057	Pocillopora_meandrina_HIv1___Sc0000014	2614195	2614653	459	302	196	1.0	+	GCAUAUUCUGACCCAAUUUUUGGACCCGUC	7	65	123	42	29	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2712648-2713129	Cluster_4058	Pocillopora_meandrina_HIv1___Sc0000014	2712648	2713129	482	4266	231	0.9932020628223159	+	GGCGCCGUAGCUCAGUUGG	1959	4090	42	52	10	52	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2718186-2718609	Cluster_4059	Pocillopora_meandrina_HIv1___Sc0000014	2718186	2718609	424	249	169	0.008032128514056224	-	GACGUGUACAUAGAAGAGACAGAUU	8	50	133	21	14	16	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2765844-2766270	Cluster_4060	Pocillopora_meandrina_HIv1___Sc0000014	2765844	2766270	427	140	24	0.007142857142857143	-	UACCGAUUUAUAAGUGAGCAGCUCUAG	31	1	137	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3098235-3098724	Cluster_4061	Pocillopora_meandrina_HIv1___Sc0000014	3098235	3098724	490	572	139	0.0	-	GGGAUGAAUGGGAAUCUUCUCUCUGAGCAUA	107	40	436	10	15	26	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3098874-3099419	Cluster_4062	Pocillopora_meandrina_HIv1___Sc0000014	3098874	3099419	546	626	242	0.07987220447284345	-	GGGAUGAAUGGGAAUCUUCUCUCUGAGCAUA	88	30	460	15	23	46	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3282435-3282865	Cluster_4063	Pocillopora_meandrina_HIv1___Sc0000014	3282435	3282865	431	96	35	0.9479166666666666	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	0	94	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3337471-3337897	Cluster_4064	Pocillopora_meandrina_HIv1___Sc0000014	3337471	3337897	427	160	57	0.00625	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	20	2	150	0	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3440068-3440470	Cluster_4065	Pocillopora_meandrina_HIv1___Sc0000014	3440068	3440470	403	81	39	0.8765432098765432	+	UGUAUUCUGCUACUGGUUCUCCCGAGC	21	1	79	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3441053-3441973	Cluster_4066	Pocillopora_meandrina_HIv1___Sc0000014	3441053	3441973	921	887	294	0.9684329199549042	+	UAUUCGCCGAUGAGGAUAUUCUUUGCCCUUU	71	1	825	6	20	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3513949-3514371	Cluster_4067	Pocillopora_meandrina_HIv1___Sc0000014	3513949	3514371	423	255	172	0.0	-	GAGGAUCUUAGCGACUGAGAGUU	7	58	121	12	14	21	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3554588-3555007	Cluster_4068	Pocillopora_meandrina_HIv1___Sc0000014	3554588	3555007	420	186	38	0.20967741935483872	.	UCUGACGAAGGGCUGACA	41	94	0	71	19	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3717108-3717578	Cluster_4069	Pocillopora_meandrina_HIv1___Sc0000014	3717108	3717578	471	488	147	0.9836065573770492	+	UCUUCGGAGGCGUGGGUUC	52	338	34	42	43	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3844744-3845165	Cluster_4070	Pocillopora_meandrina_HIv1___Sc0000014	3844744	3845165	422	143	27	0.986013986013986	+	UGGGCUGAAAUCAUACACGUG	35	1	2	49	37	38	16	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3912992-3913410	Cluster_4071	Pocillopora_meandrina_HIv1___Sc0000014	3912992	3913410	419	81	7	0.06172839506172839	-	AACGAAGUACAAGUGGUAA	75	76	2	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4130670-4131079	Cluster_4072	Pocillopora_meandrina_HIv1___Sc0000014	4130670	4131079	410	100	55	0.56	.	UUGACCGGGUGGAAAUAAGAGAGACAGC	9	8	81	2	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4138770-4139175	Cluster_4073	Pocillopora_meandrina_HIv1___Sc0000014	4138770	4139175	406	235	188	0.01276595744680851	-	GCAAGUACUCUGUUUGGAUUGGA	4	52	98	18	23	27	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4288485-4288910	Cluster_4074	Pocillopora_meandrina_HIv1___Sc0000014	4288485	4288910	426	191	46	0.2931937172774869	.	AGGGACUGAAACAUCGACUGAAGACG	42	2	170	5	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4558169-4559415	Cluster_4075	Pocillopora_meandrina_HIv1___Sc0000014	4558169	4559415	1247	1277	517	0.08065779169929523	-	UACAAACUGCAAAACGGUCUCACCUGGU	87	7	1214	5	3	12	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4559432-4560080	Cluster_4076	Pocillopora_meandrina_HIv1___Sc0000014	4559432	4560080	649	1485	376	0.05925925925925926	-	UGAUCUGUCGUGACUCUGAAUUAAGUUC	156	39	1383	2	7	19	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4560279-4560706	Cluster_4077	Pocillopora_meandrina_HIv1___Sc0000014	4560279	4560706	428	122	40	0.05737704918032787	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	51	0	115	1	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4560790-4561216	Cluster_4078	Pocillopora_meandrina_HIv1___Sc0000014	4560790	4561216	427	331	137	0.09063444108761329	-	UCCAAUCACACACAGUUCUCCUGCGGC	71	6	311	2	0	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4561591-4562421	Cluster_4079	Pocillopora_meandrina_HIv1___Sc0000014	4561591	4562421	831	405	207	0.07901234567901234	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	32	2	378	0	1	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4664447-4664870	Cluster_4080	Pocillopora_meandrina_HIv1___Sc0000014	4664447	4664870	424	145	88	0.9241379310344827	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	16	1	130	0	0	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4665958-4666384	Cluster_4081	Pocillopora_meandrina_HIv1___Sc0000014	4665958	4666384	427	134	84	0.8731343283582089	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	11	1	123	0	1	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4666873-4667276	Cluster_4082	Pocillopora_meandrina_HIv1___Sc0000014	4666873	4667276	404	146	86	0.8904109589041096	+	UAAAUCUCUCGGGUCAAUACAGAUGCG	12	1	142	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4684319-4684737	Cluster_4083	Pocillopora_meandrina_HIv1___Sc0000014	4684319	4684737	419	150	101	0.9933333333333333	+	UGGUGCCAGCAAUGUAGACU	7	23	63	20	13	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4686843-4687245	Cluster_4084	Pocillopora_meandrina_HIv1___Sc0000014	4686843	4687245	403	103	73	1.0	+	AGUGAAUGGGGUGGAACUGCU	5	26	39	13	9	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4812850-4813466	Cluster_4085	Pocillopora_meandrina_HIv1___Sc0000014	4812850	4813466	617	559	239	0.6726296958855098	.	AAAGAGCUGAAAAAAAGAAUGUUUC	131	21	466	16	3	16	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4814569-4814996	Cluster_4086	Pocillopora_meandrina_HIv1___Sc0000014	4814569	4814996	428	120	8	0.008333333333333333	-	UACCAAGGUCUUGUAGUCUAGUACAACU	69	1	119	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4815922-4816754	Cluster_4087	Pocillopora_meandrina_HIv1___Sc0000014	4815922	4816754	833	3346	306	0.15421398684997012	-	UUGAAUGUUGCGAAGCUCUUUGUCCAAA	1110	43	3178	8	16	72	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4993242-4993667	Cluster_4088	Pocillopora_meandrina_HIv1___Sc0000014	4993242	4993667	426	87	28	0.022988505747126436	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	0	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5048490-5048913	Cluster_4089	Pocillopora_meandrina_HIv1___Sc0000014	5048490	5048913	424	535	45	0.0	-	UCUCAUAAAGAGCGUAAAGGGGC	256	13	29	7	15	416	55	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5075505-5075932	Cluster_4090	Pocillopora_meandrina_HIv1___Sc0000014	5075505	5075932	428	401	139	0.0	-	GUUUAUGAUGACAUACAGAUCUGAAA	80	70	275	14	9	24	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5082612-5083021	Cluster_4091	Pocillopora_meandrina_HIv1___Sc0000014	5082612	5083021	410	102	69	1.0	+	CUUGUUAUCCAGGACAAAGAGAAGGCU	6	14	55	3	12	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5335148-5335674	Cluster_4092	Pocillopora_meandrina_HIv1___Sc0000014	5335148	5335674	527	851	375	0.007050528789659225	-	GUUUCUACUGUUUGCCUGUCAAU	28	112	487	30	49	65	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5357270-5357697	Cluster_4093	Pocillopora_meandrina_HIv1___Sc0000014	5357270	5357697	428	206	108	0.0970873786407767	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	25	0	201	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5520891-5521316	Cluster_4094	Pocillopora_meandrina_HIv1___Sc0000014	5520891	5521316	426	1963	50	0.9974528782475802	+	CGGCCUGAAAAAAAAAAAA	574	1398	281	128	82	52	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5733165-5733582	Cluster_4095	Pocillopora_meandrina_HIv1___Sc0000014	5733165	5733582	418	125	49	0.416	.	UGAGCCGAUCCUGACGCAGCA	36	30	18	44	21	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5977390-5977816	Cluster_4096	Pocillopora_meandrina_HIv1___Sc0000014	5977390	5977816	427	123	52	0.8861788617886179	+	UGUACUGUUUGUAUUUUUUUUCCUGGG	30	2	117	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5985949-5987921	Cluster_4097	Pocillopora_meandrina_HIv1___Sc0000014	5985949	5987921	1973	5814	1544	0.9305125558995528	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	527	29	5562	18	21	60	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5988456-5989193	Cluster_4098	Pocillopora_meandrina_HIv1___Sc0000014	5988456	5989193	738	387	161	0.9638242894056848	+	UAUAUAUUAAAUCUGCUUGAAUGAUCGCUC	18	4	359	2	2	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6119359-6119779	Cluster_4099	Pocillopora_meandrina_HIv1___Sc0000014	6119359	6119779	421	195	81	0.6307692307692307	.	AAGCCUGUUUCGUGAAUCGCA	32	103	8	73	5	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6393303-6393732	Cluster_4100	Pocillopora_meandrina_HIv1___Sc0000014	6393303	6393732	430	236	66	1.0	+	UGCAUAGUGCAGCAAAUUCCAUC	34	13	108	3	32	60	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6491369-6491793	Cluster_4101	Pocillopora_meandrina_HIv1___Sc0000014	6491369	6491793	425	193	68	0.9896373056994818	+	CUCUAUGAAAGAUUUGCACACAAUU	63	16	114	10	5	13	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6570607-6571539	Cluster_4102	Pocillopora_meandrina_HIv1___Sc0000014	6570607	6571539	933	908	274	0.960352422907489	+	AGAACUUGGAGGAGCAAAAAGAAUUCCA	76	26	774	30	12	28	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6659357-6659784	Cluster_4103	Pocillopora_meandrina_HIv1___Sc0000014	6659357	6659784	428	158	64	0.18354430379746836	-	GCGUUUAAAUUCUCUUCUGGCUCCCAGG	45	1	144	1	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6660034-6660525	Cluster_4104	Pocillopora_meandrina_HIv1___Sc0000014	6660034	6660525	492	2078	243	0.7155919153031761	.	UUUGGGAUCAAAGACGAAACGAGU	431	27	766	165	27	308	785	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6909064-6910206	Cluster_4105	Pocillopora_meandrina_HIv1___Sc0000014	6909064	6910206	1143	15670	1296	0.020931716656030632	-	UUUGUAGGCUCUAACAGUACAUUGUU	4412	1455	13925	43	55	54	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7024208-7024732	Cluster_4106	Pocillopora_meandrina_HIv1___Sc0000014	7024208	7024732	525	2603	409	0.958893584325778	+	UGCUUGAAUUCUGCCGAACUGUACUGC	870	18	2491	4	10	43	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7025303-7026004	Cluster_4107	Pocillopora_meandrina_HIv1___Sc0000014	7025303	7026004	702	268	131	0.914179104477612	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	27	1	253	2	4	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7027233-7027663	Cluster_4108	Pocillopora_meandrina_HIv1___Sc0000014	7027233	7027663	431	305	157	0.8622950819672132	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	33	4	283	1	0	2	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7060991-7061421	Cluster_4109	Pocillopora_meandrina_HIv1___Sc0000014	7060991	7061421	431	1015	121	0.0	-	UCCGUACUUAAAAUCCCUCACAUUGACUGU	425	10	989	4	6	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7087510-7087936	Cluster_4110	Pocillopora_meandrina_HIv1___Sc0000014	7087510	7087936	427	123	51	0.17886178861788618	-	UCUUGAAGCGUUAUCUGCCGGUCUGCC	10	8	104	7	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7124610-7125033	Cluster_4111	Pocillopora_meandrina_HIv1___Sc0000014	7124610	7125033	424	88	40	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCCUG	37	5	75	1	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7166952-7167381	Cluster_4112	Pocillopora_meandrina_HIv1___Sc0000014	7166952	7167381	430	17507	268	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCC	4172	34	17382	10	21	16	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7171665-7172105	Cluster_4113	Pocillopora_meandrina_HIv1___Sc0000014	7171665	7172105	441	1059	192	0.049102927289896126	-	UUUACAACGUCCGGCUUGACCAUUUACA	131	8	1002	7	9	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7209425-7209861	Cluster_4114	Pocillopora_meandrina_HIv1___Sc0000014	7209425	7209861	437	7346	240	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCCUG	3788	15	7321	1	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7239259-7239676	Cluster_4115	Pocillopora_meandrina_HIv1___Sc0000014	7239259	7239676	418	79	15	0.9873417721518988	+	CGGCUUGAAGAAAAAAAAAA	27	58	1	3	6	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7247919-7248429	Cluster_4116	Pocillopora_meandrina_HIv1___Sc0000014	7247919	7248429	511	280	65	0.9714285714285714	+	UGAUGCAAUCUGUUUCUGCAUGAGGGC	54	1	274	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7249045-7249473	Cluster_4117	Pocillopora_meandrina_HIv1___Sc0000014	7249045	7249473	429	157	69	0.9617834394904459	+	UAUUUUCAAACUGCGACGAUUGCUUCUGA	27	2	148	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7351086-7351515	Cluster_4118	Pocillopora_meandrina_HIv1___Sc0000014	7351086	7351515	430	148	35	0.0	-	CUCUCUCGAACAUUUUACUAUUUAGGUA	31	3	139	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7526838-7527265	Cluster_4119	Pocillopora_meandrina_HIv1___Sc0000014	7526838	7527265	428	192	102	0.921875	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	27	2	177	1	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7560462-7560889	Cluster_4120	Pocillopora_meandrina_HIv1___Sc0000014	7560462	7560889	428	106	31	1.0	+	UGUGCCAAAGGUUUAGAACGAAAGAACG	29	0	104	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7822908-7823325	Cluster_4121	Pocillopora_meandrina_HIv1___Sc0000014	7822908	7823325	418	554	6	1.0	+	CUGAGAUUGCUGUAGGCU	529	554	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8090277-8090759	Cluster_4122	Pocillopora_meandrina_HIv1___Sc0000014	8090277	8090759	483	2451	576	0.9991840065279478	+	ACUGGGAGAGAAUCAAACUGAUGCUU	216	393	1409	113	104	304	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8094498-8094979	Cluster_4123	Pocillopora_meandrina_HIv1___Sc0000014	8094498	8094979	482	606	180	1.0	+	ACUGGGAGAGAAUCAAACUGAUGGU	34	67	288	49	63	58	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8096153-8096633	Cluster_4124	Pocillopora_meandrina_HIv1___Sc0000014	8096153	8096633	481	381	211	0.9973753280839895	+	CUAGGAGAGAAUCCAGCUGAUGCUC	19	72	201	22	25	26	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8097363-8097787	Cluster_4125	Pocillopora_meandrina_HIv1___Sc0000014	8097363	8097787	425	223	89	1.0	+	AACCUCCUAAGUAAAUAACACCACU	23	35	112	18	16	24	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8099444-8099927	Cluster_4126	Pocillopora_meandrina_HIv1___Sc0000014	8099444	8099927	484	466	214	0.9978540772532188	+	AACCUCCUUCUUGGCAUCGCUGCAUGA	35	67	249	49	37	25	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8244722-8247613	Cluster_4127	Pocillopora_meandrina_HIv1___Sc0000014	8244722	8247613	2892	31930	5504	0.010053241465706233	-	UGGUCUCACGAACUUCUUUUUUUCAAGA	1486	198	30885	179	100	200	368	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8314930-8315357	Cluster_4128	Pocillopora_meandrina_HIv1___Sc0000014	8314930	8315357	428	100	36	0.01	-	UCUGCCUCAUUUAAGAACUCUAGCCCAAGG	14	0	96	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8548731-8549222	Cluster_4129	Pocillopora_meandrina_HIv1___Sc0000014	8548731	8549222	492	7076	1337	0.9894007914075749	+	CAUAUACUAAAAUUGGAACGAUA	196	927	3667	518	512	837	615	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8675063-8675486	Cluster_4130	Pocillopora_meandrina_HIv1___Sc0000014	8675063	8675486	424	109	43	1.0	+	UGAUUGCAGAGCACAGCAUUGCCACC	12	1	104	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8695815-8696220	Cluster_4131	Pocillopora_meandrina_HIv1___Sc0000014	8695815	8696220	406	118	83	0.00847457627118644	-	CACUGGCGUAGAACCAAGUUGGGACU	8	20	59	7	7	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9034685-9035113	Cluster_4132	Pocillopora_meandrina_HIv1___Sc0000014	9034685	9035113	429	2755	40	0.0	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAA	1188	740	1835	86	49	33	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9077979-9078682	Cluster_4133	Pocillopora_meandrina_HIv1___Sc0000014	9077979	9078682	704	517	221	0.0367504835589942	-	UAAUUUAUCCAUGUAUUCUUGAAGACGU	33	10	477	4	3	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9158628-9159057	Cluster_4134	Pocillopora_meandrina_HIv1___Sc0000014	9158628	9159057	430	825	149	0.9878787878787879	+	AUUUAUCCAAAGAACAACGACUCGAGGUC	192	16	660	4	28	9	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9192245-9192674	Cluster_4135	Pocillopora_meandrina_HIv1___Sc0000014	9192245	9192674	430	3357	154	0.9958296097706285	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	1443	7	3334	1	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9355807-9356269	Cluster_4136	Pocillopora_meandrina_HIv1___Sc0000014	9355807	9356269	463	215	148	0.9813953488372092	+	GUGAAUUUGGAUAAACUGUGGUCCCU	5	37	114	16	19	23	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9356493-9356904	Cluster_4137	Pocillopora_meandrina_HIv1___Sc0000014	9356493	9356904	412	146	92	0.9726027397260274	+	UCAGUCGCAGAGCUGAAGAAA	7	43	50	21	8	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9365459-9365552	Cluster_4138	Pocillopora_meandrina_HIv1___Sc0000014	9365459	9365552	94	11095	130	0.0	-	UUCCAGAUUUGUAUCAUUGUUAU	7555	84	19	144	240	10206	402	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000014:9519073-9519500	Cluster_4139	Pocillopora_meandrina_HIv1___Sc0000014	9519073	9519500	428	135	63	0.7185185185185186	.	UAUCAAUUAGAUUGUCUGUGAGUUUCCCUA	13	1	129	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:37644-38073	Cluster_4140	Pocillopora_meandrina_HIv1___Sc0000015	37644	38073	430	187	54	0.0481283422459893	-	UGAAAACUUAACAACGGACGGUAGGUCAUU	37	0	170	2	4	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:84063-84975	Cluster_4141	Pocillopora_meandrina_HIv1___Sc0000015	84063	84975	913	3339	503	0.5226115603474094	.	AUUUGUGAAAGAAAUGAUUUGGAGACCCC	463	20	3113	14	105	19	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:85347-85924	Cluster_4142	Pocillopora_meandrina_HIv1___Sc0000015	85347	85924	578	3597	403	0.5440644981929386	.	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	410	24	3420	6	19	29	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:86507-86955	Cluster_4143	Pocillopora_meandrina_HIv1___Sc0000015	86507	86955	449	1327	112	0.45968349660889224	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	293	15	1276	10	14	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:87437-88212	Cluster_4144	Pocillopora_meandrina_HIv1___Sc0000015	87437	88212	776	7363	435	0.0903164471003667	-	UCACCAUGAAAAGACUCUGGGCCAAAG	2348	14	7208	7	16	75	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:122288-123222	Cluster_4145	Pocillopora_meandrina_HIv1___Sc0000015	122288	123222	935	472	121	0.4088983050847458	.	AGAAAUACUGGCUGUCCAACUUAACAAA	46	7	424	3	8	4	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:309011-309465	Cluster_4146	Pocillopora_meandrina_HIv1___Sc0000015	309011	309465	455	1244	220	0.9991961414790996	+	UCGGCCCUUUCGAAGCUCAGAGC	374	119	360	91	46	543	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:376420-377589	Cluster_4147	Pocillopora_meandrina_HIv1___Sc0000015	376420	377589	1170	1103	233	0.7280145058930191	.	UAUUUUCUUCUGGUGGUUGAUGUCCUC	228	7	1059	2	10	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:377611-378021	Cluster_4148	Pocillopora_meandrina_HIv1___Sc0000015	377611	378021	411	134	70	0.5298507462686567	.	UUAACUCCACAACAGAACUCAAAUUCA	15	1	109	1	5	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:424996-425424	Cluster_4149	Pocillopora_meandrina_HIv1___Sc0000015	424996	425424	429	88	29	1.0	+	CAAGACCGUGGGUGAGCUUCAAGACAUGA	31	4	82	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:473953-474380	Cluster_4150	Pocillopora_meandrina_HIv1___Sc0000015	473953	474380	428	585	113	0.9111111111111111	+	UGUGACAGCUCUUUUCCUCCUGCAAAGA	144	14	552	2	1	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:503926-504356	Cluster_4151	Pocillopora_meandrina_HIv1___Sc0000015	503926	504356	431	325	67	0.0	-	CGGAUGUCCAUUCAAGAACCUGAAAACUAU	55	5	311	2	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:963175-963592	Cluster_4152	Pocillopora_meandrina_HIv1___Sc0000015	963175	963592	418	1893	19	0.007395668251452721	-	CUUUCUGGAGUUAAGGCG	1853	1885	4	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1021790-1022211	Cluster_4153	Pocillopora_meandrina_HIv1___Sc0000015	1021790	1022211	422	93	14	1.0	+	UCCGUGUGUUUGAUUGGAACAU	28	14	7	9	40	23	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1067869-1068297	Cluster_4154	Pocillopora_meandrina_HIv1___Sc0000015	1067869	1068297	429	153	43	1.0	+	GAAGAGACCAAUCCCAAGUGGCGUAGAUA	96	7	132	1	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1164772-1165200	Cluster_4155	Pocillopora_meandrina_HIv1___Sc0000015	1164772	1165200	429	225	28	1.0	+	UAGCAAAACAAACAGGUCUUUCGAUGGGA	146	0	223	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1253254-1253683	Cluster_4156	Pocillopora_meandrina_HIv1___Sc0000015	1253254	1253683	430	692	123	1.0	+	UCGGUACUCUGUUCAAUAAUAUUUCUC	230	4	682	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1520535-1520962	Cluster_4157	Pocillopora_meandrina_HIv1___Sc0000015	1520535	1520962	428	180	30	0.14444444444444443	-	UUGCAAAGAUAAAUCCGUGGUGAACUUC	74	2	173	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1564041-1564465	Cluster_4158	Pocillopora_meandrina_HIv1___Sc0000015	1564041	1564465	425	138	33	0.9710144927536232	+	UCGGAUUUUAAGGAGACAGCCCGUCAGU	35	3	64	3	2	23	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1699629-1700330	Cluster_4159	Pocillopora_meandrina_HIv1___Sc0000015	1699629	1700330	702	296	150	0.9459459459459459	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	28	0	288	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1701560-1701988	Cluster_4160	Pocillopora_meandrina_HIv1___Sc0000015	1701560	1701988	429	220	124	0.8772727272727273	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	33	3	205	1	0	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1754935-1755365	Cluster_4161	Pocillopora_meandrina_HIv1___Sc0000015	1754935	1755365	431	196	77	0.9897959183673469	+	UGAUUACUUCUGAUAUAUGACUGUUCCAGGU	20	5	184	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1761143-1761570	Cluster_4162	Pocillopora_meandrina_HIv1___Sc0000015	1761143	1761570	428	163	58	0.024539877300613498	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	38	2	143	1	5	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1783786-1784599	Cluster_4163	Pocillopora_meandrina_HIv1___Sc0000015	1783786	1784599	814	451	240	0.08647450110864745	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	24	6	419	4	1	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1884414-1884922	Cluster_4164	Pocillopora_meandrina_HIv1___Sc0000015	1884414	1884922	509	396	140	1.0	+	UGUGUCUUGUAUGCUCUUAAGGAGUCGUC	33	5	387	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1908015-1908452	Cluster_4165	Pocillopora_meandrina_HIv1___Sc0000015	1908015	1908452	438	445	172	0.8674157303370786	+	UGUAAGACGCACUCUACUCUGUUGU	80	25	381	8	6	4	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1913033-1913488	Cluster_4166	Pocillopora_meandrina_HIv1___Sc0000015	1913033	1913488	456	284	87	0.3028169014084507	.	AAAGUUAUGAAUAAAAGGAUCUCUGAAGUG	29	0	276	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1920978-1922480	Cluster_4167	Pocillopora_meandrina_HIv1___Sc0000015	1920978	1922480	1503	3727	1018	0.9688757713979071	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	434	18	3561	14	33	49	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1930537-1930964	Cluster_4168	Pocillopora_meandrina_HIv1___Sc0000015	1930537	1930964	428	108	9	1.0	+	UACCAAGGUCUUGUAGUCUAGUACAACU	65	0	107	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1948482-1949013	Cluster_4169	Pocillopora_meandrina_HIv1___Sc0000015	1948482	1949013	532	6625	406	0.023547169811320753	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	2042	160	6249	12	41	12	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2179033-2179463	Cluster_4170	Pocillopora_meandrina_HIv1___Sc0000015	2179033	2179463	431	549	65	0.9981785063752276	+	UGACAAUCAUGCUGCUAAGUUCCUACGC	147	0	549	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2217630-2218097	Cluster_4171	Pocillopora_meandrina_HIv1___Sc0000015	2217630	2218097	468	331	227	0.0030211480362537764	-	CAGUGACUAUCUUGAAUCAGCA	8	72	156	25	31	18	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2219352-2219768	Cluster_4172	Pocillopora_meandrina_HIv1___Sc0000015	2219352	2219768	417	171	127	0.005847953216374269	-	CGAACUAUAGAUCAGCUGAAGAAAACUGUU	6	33	95	10	15	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2366479-2366907	Cluster_4173	Pocillopora_meandrina_HIv1___Sc0000015	2366479	2366907	429	423	234	0.0	-	GAAGGAAUAAAAACGAUCGACA	29	108	156	48	52	31	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2498054-2498639	Cluster_4174	Pocillopora_meandrina_HIv1___Sc0000015	2498054	2498639	586	525	353	0.0	-	GAUGAUAGAGACUGGGACUACC	8	139	202	52	48	44	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2588192-2588971	Cluster_4175	Pocillopora_meandrina_HIv1___Sc0000015	2588192	2588971	780	412	176	0.05825242718446602	-	UAUUAUACUGCGGGUUACUCAGCCAAGC	20	2	373	4	3	10	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2589510-2591482	Cluster_4176	Pocillopora_meandrina_HIv1___Sc0000015	2589510	2591482	1973	6947	1696	0.05297250611774867	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	485	38	6673	18	20	75	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2691120-2691590	Cluster_4177	Pocillopora_meandrina_HIv1___Sc0000015	2691120	2691590	471	2040	241	1.0	+	GGCCUGUUGGUCUAGUGGCAUGAUUCU	864	68	1871	18	22	19	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2693843-2694272	Cluster_4178	Pocillopora_meandrina_HIv1___Sc0000015	2693843	2694272	430	1118	181	0.0	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	456	59	1003	11	15	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2695144-2695606	Cluster_4179	Pocillopora_meandrina_HIv1___Sc0000015	2695144	2695606	463	2534	254	0.9992107340173638	+	GGCCUGUUGGUCUAGUGGUAUGAUUCU	1184	118	2308	21	36	34	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2831546-2831976	Cluster_4180	Pocillopora_meandrina_HIv1___Sc0000015	2831546	2831976	431	94	29	0.031914893617021274	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	34	0	93	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2908426-2908851	Cluster_4181	Pocillopora_meandrina_HIv1___Sc0000015	2908426	2908851	426	102	43	0.9901960784313726	+	UGUUUGAUCUUUAGGUCCUUCGGACAUAGU	17	2	99	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2943925-2944456	Cluster_4182	Pocillopora_meandrina_HIv1___Sc0000015	2943925	2944456	532	11005	468	1.0	+	CGGAUAAGUACACUUGGCACAUUC	4172	356	4797	141	121	176	5414	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2945554-2946088	Cluster_4183	Pocillopora_meandrina_HIv1___Sc0000015	2945554	2946088	535	4585	520	0.9995637949836423	+	GUGCUACAUUAGAACCCAGUCUACUGA	433	318	2622	227	227	503	688	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3136577-3136996	Cluster_4184	Pocillopora_meandrina_HIv1___Sc0000015	3136577	3136996	420	129	62	1.0	+	UGACAAUUCUGAUGGUUUUCACAAUUCUGA	35	3	122	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3137179-3137740	Cluster_4185	Pocillopora_meandrina_HIv1___Sc0000015	3137179	3137740	562	338	142	0.9911242603550295	+	UCCACACCCAGAUAUGUAAUUCCAUGUAGG	18	4	322	0	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3138374-3138802	Cluster_4186	Pocillopora_meandrina_HIv1___Sc0000015	3138374	3138802	429	123	54	1.0	+	UGAAGAUCUGUAGCAAGGCAAAACUUAGC	26	2	115	3	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3139216-3139827	Cluster_4187	Pocillopora_meandrina_HIv1___Sc0000015	3139216	3139827	612	1249	329	1.0	+	UGUUGUCUUCGCAGGUUGCAGUUGUCC	145	10	1202	4	12	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3142394-3142954	Cluster_4188	Pocillopora_meandrina_HIv1___Sc0000015	3142394	3142954	561	1015	200	0.9704433497536946	+	UGAAACGUCAAGUGCUGCAGAAAUUCUGC	194	31	960	13	5	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3143025-3143692	Cluster_4189	Pocillopora_meandrina_HIv1___Sc0000015	3143025	3143692	668	11148	921	0.9615177610333692	+	UAGGAAGAUACAAGACUACAAAUUUUAGU	1522	72	10571	18	50	233	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3143740-3145500	Cluster_4190	Pocillopora_meandrina_HIv1___Sc0000015	3143740	3145500	1761	2120	737	0.9891509433962264	+	UGUAAACUUCUAUGGGUUUCUUUGACGU	82	16	2054	9	5	16	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3147305-3147741	Cluster_4191	Pocillopora_meandrina_HIv1___Sc0000015	3147305	3147741	437	478	154	0.997907949790795	+	UUUCCGGUCUUUUUGCAGCUUUUCUGUGA	52	1	470	0	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3149186-3149832	Cluster_4192	Pocillopora_meandrina_HIv1___Sc0000015	3149186	3149832	647	573	250	0.7329842931937173	.	UUUGCAGGAAAUGUGAUUUAAAAGGAAAUGU	41	4	522	1	3	21	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3149890-3150317	Cluster_4193	Pocillopora_meandrina_HIv1___Sc0000015	3149890	3150317	428	391	48	0.0025575447570332483	-	ACUGAGAUUCUGGCUGGAUUGUUCCACU	149	0	387	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3150652-3152268	Cluster_4194	Pocillopora_meandrina_HIv1___Sc0000015	3150652	3152268	1617	4389	853	0.8466621098200046	+	UAACACAACUCGCUUCCGGUCACGACACU	392	30	4175	21	26	44	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3152356-3152782	Cluster_4195	Pocillopora_meandrina_HIv1___Sc0000015	3152356	3152782	427	144	62	0.9583333333333334	+	UUACAGAAAUUAAUGCGGGAAACAGUACG	27	6	137	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3152830-3153763	Cluster_4196	Pocillopora_meandrina_HIv1___Sc0000015	3152830	3153763	934	812	382	0.9938423645320197	+	UGUAAACUUCUACGGGUUUCUUUGACGU	58	16	744	14	4	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3155089-3155641	Cluster_4197	Pocillopora_meandrina_HIv1___Sc0000015	3155089	3155641	553	233	81	0.9227467811158798	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	40	1	196	4	6	19	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3156880-3158102	Cluster_4198	Pocillopora_meandrina_HIv1___Sc0000015	3156880	3158102	1223	2020	497	0.805940594059406	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	448	9	1904	6	16	24	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3158714-3159117	Cluster_4199	Pocillopora_meandrina_HIv1___Sc0000015	3158714	3159117	404	165	102	0.49696969696969695	.	UGCAAACUCGUCUGUAGACUCUGUACG	24	1	162	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3159946-3161232	Cluster_4200	Pocillopora_meandrina_HIv1___Sc0000015	3159946	3161232	1287	4292	1077	0.766309412861137	.	UCAGCGAAGAAUUAAAGAAGAACGG	164	93	3760	18	28	73	320	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3162249-3164098	Cluster_4201	Pocillopora_meandrina_HIv1___Sc0000015	3162249	3164098	1850	5400	1314	0.9377777777777778	+	UGAGAACGACGUCACCAGGCUUUAAGG	193	45	5009	15	42	98	191	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3164893-3165320	Cluster_4202	Pocillopora_meandrina_HIv1___Sc0000015	3164893	3165320	428	331	175	0.8761329305135952	+	UGAAUCGGUACGUGCGAACACGAAAAGG	15	2	294	5	3	4	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3165435-3167680	Cluster_4203	Pocillopora_meandrina_HIv1___Sc0000015	3165435	3167680	2246	5075	1623	0.9026600985221674	+	UGUAUCCUGAAGCAUAAGACGCAGUCG	164	100	4572	35	59	75	234	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3167847-3168312	Cluster_4204	Pocillopora_meandrina_HIv1___Sc0000015	3167847	3168312	466	410	162	0.9853658536585366	+	UGUGCUGUUGUCGGAAGCUUGCUGGCAGU	49	3	396	0	2	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3170293-3170722	Cluster_4205	Pocillopora_meandrina_HIv1___Sc0000015	3170293	3170722	430	192	82	0.9895833333333334	+	UGAGAUUACGAAUUUUACGAGCGAGAACGU	41	1	184	2	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3171419-3171837	Cluster_4206	Pocillopora_meandrina_HIv1___Sc0000015	3171419	3171837	419	157	70	0.9936305732484076	+	UGCAACGAUUUUCAGUGGACACAAAUGGGA	43	2	150	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3175205-3176561	Cluster_4207	Pocillopora_meandrina_HIv1___Sc0000015	3175205	3176561	1357	8555	1627	0.9390999415546464	+	UGAGACUUGUUGUUGGGUAACUGACGUG	1609	42	8210	30	28	111	134	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3626943-3627363	Cluster_4208	Pocillopora_meandrina_HIv1___Sc0000015	3626943	3627363	421	81	21	0.0	-	UACUGCUAUUCUUCUUCAGGC	28	5	2	33	18	20	3	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3719411-3719837	Cluster_4209	Pocillopora_meandrina_HIv1___Sc0000015	3719411	3719837	427	166	46	0.2469879518072289	.	UGAUUGGUGCAUUUCGAUCCUUGCUGU	68	2	159	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3752667-3753087	Cluster_4210	Pocillopora_meandrina_HIv1___Sc0000015	3752667	3753087	421	138	36	0.12318840579710146	-	UACUGCUAUUCUUCUUCAGGC	33	3	55	38	21	18	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3776683-3777111	Cluster_4211	Pocillopora_meandrina_HIv1___Sc0000015	3776683	3777111	429	146	40	0.00684931506849315	-	UGAAACGUGUUGCUGAACGCUUGUUGUAG	33	1	144	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3777214-3777641	Cluster_4212	Pocillopora_meandrina_HIv1___Sc0000015	3777214	3777641	428	84	16	0.047619047619047616	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	2	81	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3822576-3823005	Cluster_4213	Pocillopora_meandrina_HIv1___Sc0000015	3822576	3823005	430	117	20	0.9658119658119658	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	57	0	117	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3855316-3855749	Cluster_4214	Pocillopora_meandrina_HIv1___Sc0000015	3855316	3855749	434	214	144	0.43457943925233644	.	CCGGCAAAUACAAGAAUAAAUACAUCGU	7	8	181	4	2	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4067580-4068007	Cluster_4215	Pocillopora_meandrina_HIv1___Sc0000015	4067580	4068007	428	280	110	0.9107142857142857	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	32	4	264	3	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4161872-4162300	Cluster_4216	Pocillopora_meandrina_HIv1___Sc0000015	4161872	4162300	429	705	13	0.0	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	612	0	705	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4606846-4607255	Cluster_4217	Pocillopora_meandrina_HIv1___Sc0000015	4606846	4607255	410	118	86	0.0	-	AGGAAAGACGAUGUUGCUGCC	5	38	29	15	7	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4719398-4719960	Cluster_4218	Pocillopora_meandrina_HIv1___Sc0000015	4719398	4719960	563	986	260	0.9726166328600405	+	UGGAGUAAUUGGAUCUUGUUCAUCAGAGU	114	8	941	2	2	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4858467-4858887	Cluster_4219	Pocillopora_meandrina_HIv1___Sc0000015	4858467	4858887	421	138	25	1.0	+	AGAGAGCUUUCUGAACCAGAA	39	37	0	42	58	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4859061-4859670	Cluster_4220	Pocillopora_meandrina_HIv1___Sc0000015	4859061	4859670	610	601	56	1.0	+	UGUGGUUCGGAAUGCUUUCUCC	358	21	2	59	491	19	9	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5252570-5252999	Cluster_4221	Pocillopora_meandrina_HIv1___Sc0000015	5252570	5252999	430	324	131	0.11728395061728394	-	UGUGUCAGAUGCGUUUCAGAAAUGGUU	98	5	307	2	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5253150-5253805	Cluster_4222	Pocillopora_meandrina_HIv1___Sc0000015	5253150	5253805	656	661	302	0.40242057488653554	.	AUAAGAGAUAUAAACUUCUGAAAGCCUGUG	32	5	595	1	8	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5254025-5254682	Cluster_4223	Pocillopora_meandrina_HIv1___Sc0000015	5254025	5254682	658	1141	321	0.07449605609114812	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	108	4	1086	3	4	25	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5254920-5255346	Cluster_4224	Pocillopora_meandrina_HIv1___Sc0000015	5254920	5255346	427	232	131	0.14224137931034483	-	UGAGUCGAGGUUAUUCACAAUACGAGC	38	5	202	1	1	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5319061-5319480	Cluster_4225	Pocillopora_meandrina_HIv1___Sc0000015	5319061	5319480	420	13104	30	0.0	-	CUUUCUGGAGUUAAGGCA	10532	13104	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5640163-5640592	Cluster_4226	Pocillopora_meandrina_HIv1___Sc0000015	5640163	5640592	430	157	48	0.9872611464968153	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	23	0	156	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5920350-5920918	Cluster_4227	Pocillopora_meandrina_HIv1___Sc0000015	5920350	5920918	569	1634	357	0.09914320685434516	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	262	6	1574	7	2	31	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6137366-6138033	Cluster_4228	Pocillopora_meandrina_HIv1___Sc0000015	6137366	6138033	668	752	129	0.31382978723404253	.	UCGACGUCGAUAUCAACAUUCUUAAUGU	205	1	545	1	43	2	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6142344-6142771	Cluster_4229	Pocillopora_meandrina_HIv1___Sc0000015	6142344	6142771	428	273	132	0.608058608058608	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	46	25	232	1	5	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6290041-6290469	Cluster_4230	Pocillopora_meandrina_HIv1___Sc0000015	6290041	6290469	429	537	73	0.9925512104283054	+	UUGUGUAUUAAGUGAGUUGUGAUUUCGUU	149	2	373	6	7	38	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6307672-6308092	Cluster_4231	Pocillopora_meandrina_HIv1___Sc0000015	6307672	6308092	421	88	40	1.0	+	AACUGUGAGAUUGUGUGAGAGGUGAGC	16	7	68	4	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6426310-6426739	Cluster_4232	Pocillopora_meandrina_HIv1___Sc0000015	6426310	6426739	430	1198	97	0.0	-	UUACGUAUGCUCUUCACACUCAAGCCUAA	349	15	1140	7	18	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6538539-6538961	Cluster_4233	Pocillopora_meandrina_HIv1___Sc0000015	6538539	6538961	423	271	104	0.09225092250922509	-	UGCGUCUGUUCAGUGAUGGAU	65	106	21	112	25	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6803488-6803949	Cluster_4234	Pocillopora_meandrina_HIv1___Sc0000015	6803488	6803949	462	33952	709	8.836003770028276e-05	-	GCACUGAUGGUUCAGUGGUAGAAUUCUC	14646	617	32023	276	417	235	384	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6806070-6806578	Cluster_4235	Pocillopora_meandrina_HIv1___Sc0000015	6806070	6806578	509	440	120	0.925	+	GCACUUGUGGUUCAGUGGUUGAACGCU	51	180	167	42	35	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6812947-6813473	Cluster_4236	Pocillopora_meandrina_HIv1___Sc0000015	6812947	6813473	527	591	402	0.0	-	UUAGUUGGAUUCGAGCUCUUGGG	7	158	237	58	43	59	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6817520-6818119	Cluster_4237	Pocillopora_meandrina_HIv1___Sc0000015	6817520	6818119	600	678	419	0.0	-	GACCGAAUGGAAACUCUUUACGUUGACGU	14	167	290	66	50	58	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6819204-6819622	Cluster_4238	Pocillopora_meandrina_HIv1___Sc0000015	6819204	6819622	419	84	58	0.0	-	CAGUAGAUCGAGAUCCAAGCUCUGACC	4	19	34	17	5	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6821250-6821667	Cluster_4239	Pocillopora_meandrina_HIv1___Sc0000015	6821250	6821667	418	330	238	0.0	-	GGACGAUGCGCUGUCGAUGC	5	71	142	23	41	25	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7024427-7024845	Cluster_4240	Pocillopora_meandrina_HIv1___Sc0000015	7024427	7024845	419	175	121	0.005714285714285714	-	GUAAACUGUAAAAUGGUAG	5	45	84	8	12	14	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7029745-7030423	Cluster_4241	Pocillopora_meandrina_HIv1___Sc0000015	7029745	7030423	679	14148	2851	0.9830364715860899	+	CCCUCGUGGCUGAUCUGGUGAU	694	3265	5047	1356	2266	1148	1066	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7075190-7075786	Cluster_4242	Pocillopora_meandrina_HIv1___Sc0000015	7075190	7075786	597	5626	509	0.004088162104514753	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	848	12	5558	2	10	10	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7220785-7221212	Cluster_4243	Pocillopora_meandrina_HIv1___Sc0000015	7220785	7221212	428	236	122	0.5889830508474576	.	UGGCCGAUCUGGACACUCGUU	14	78	39	68	24	23	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7385939-7386363	Cluster_4244	Pocillopora_meandrina_HIv1___Sc0000015	7385939	7386363	425	280	129	0.35	.	UGCGAAAUGAACUCAGAGCUUUCUG	63	2	250	4	4	2	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7387855-7388282	Cluster_4245	Pocillopora_meandrina_HIv1___Sc0000015	7387855	7388282	428	113	10	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	73	0	112	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7563932-7564528	Cluster_4246	Pocillopora_meandrina_HIv1___Sc0000015	7563932	7564528	597	5707	494	0.9985982127212195	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	876	10	5663	1	7	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7642016-7642588	Cluster_4247	Pocillopora_meandrina_HIv1___Sc0000015	7642016	7642588	573	602	213	0.03820598006644518	-	UAUCUGGAAAACUAUAUGAUCUUAACUUUA	66	8	577	2	3	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7782375-7782875	Cluster_4248	Pocillopora_meandrina_HIv1___Sc0000015	7782375	7782875	501	609	185	0.8341543513957307	+	UGUAAACCUCUGAUUACC	66	103	457	0	1	16	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7789352-7789778	Cluster_4249	Pocillopora_meandrina_HIv1___Sc0000015	7789352	7789778	427	180	83	0.9	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	24	0	164	0	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8022317-8022743	Cluster_4250	Pocillopora_meandrina_HIv1___Sc0000015	8022317	8022743	427	210	105	0.8476190476190476	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	26	0	194	2	0	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8037865-8038265	Cluster_4251	Pocillopora_meandrina_HIv1___Sc0000015	8037865	8038265	401	220	121	0.8545454545454545	+	UCCAUCAUGCUCAGAUCUGGUUGAUCAUC	17	16	187	0	1	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8038314-8038740	Cluster_4252	Pocillopora_meandrina_HIv1___Sc0000015	8038314	8038740	427	191	98	0.8691099476439791	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	19	1	181	2	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8138598-8139026	Cluster_4253	Pocillopora_meandrina_HIv1___Sc0000015	8138598	8139026	429	183	72	1.0	+	GAAGAGUUGAGUAGGAUGUUGAACGAAGA	31	8	166	5	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8253460-8253904	Cluster_4254	Pocillopora_meandrina_HIv1___Sc0000015	8253460	8253904	445	428	133	0.9789719626168224	+	UACGGUAUUUGAGACGCAAUAUGACUCGC	37	11	400	2	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8262262-8262689	Cluster_4255	Pocillopora_meandrina_HIv1___Sc0000015	8262262	8262689	428	172	69	0.9941860465116279	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	5	163	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8263467-8263915	Cluster_4256	Pocillopora_meandrina_HIv1___Sc0000015	8263467	8263915	449	364	158	0.8104395604395604	+	UCUUGUCUUAAAUUCUGAAUUCUCACUUC	64	1	341	2	4	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8339361-8339959	Cluster_4257	Pocillopora_meandrina_HIv1___Sc0000015	8339361	8339959	599	5102	973	0.999607996863975	+	UGCCCAGUGACGAUAAAGAUGA	298	1308	1425	437	714	483	735	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8387393-8387805	Cluster_4258	Pocillopora_meandrina_HIv1___Sc0000015	8387393	8387805	413	187	134	0.0	-	UUAGAUCGAUGACGUGCCC	6	48	82	19	16	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8497462-8497984	Cluster_4259	Pocillopora_meandrina_HIv1___Sc0000015	8497462	8497984	523	1271	375	0.0	-	GGCCAAAGUGAUAACGCUUAUACUCUGAUG	151	177	785	91	75	73	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8498175-8498704	Cluster_4260	Pocillopora_meandrina_HIv1___Sc0000015	8498175	8498704	530	904	307	0.0	-	GAUAAAAAAUAAAGUCUGACACUG	229	216	230	71	80	53	254	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8500922-8501444	Cluster_4261	Pocillopora_meandrina_HIv1___Sc0000015	8500922	8501444	523	911	276	0.0	-	GAUAAAAUUGCAAGUCUGAUACUGA	92	123	482	80	41	63	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8543212-8543629	Cluster_4262	Pocillopora_meandrina_HIv1___Sc0000015	8543212	8543629	418	79	13	1.0	+	UGGCCUGAAAAAAAAAAAAAA	14	48	0	16	15	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8687559-8687991	Cluster_4263	Pocillopora_meandrina_HIv1___Sc0000015	8687559	8687991	433	520368	819	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	201837	25	519564	5	22	45	707	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8753275-8753749	Cluster_4264	Pocillopora_meandrina_HIv1___Sc0000015	8753275	8753749	475	5028	361	0.0	-	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	1445	124	3867	441	423	126	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8753829-8754254	Cluster_4265	Pocillopora_meandrina_HIv1___Sc0000015	8753829	8754254	426	104	55	0.019230769230769232	-	UCCCAUGUGGUCUAGUGGUUAGGAUUCCU	9	20	68	11	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8756244-8756664	Cluster_4266	Pocillopora_meandrina_HIv1___Sc0000015	8756244	8756664	421	311	19	1.0	+	UCGACUCCCGGUAUGGGAACA	259	0	3	274	18	16	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8783889-8784306	Cluster_4267	Pocillopora_meandrina_HIv1___Sc0000015	8783889	8784306	418	130	9	0.0	-	CGGCCUGAAAAAAAAAAA	78	127	0	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8855524-8855938	Cluster_4268	Pocillopora_meandrina_HIv1___Sc0000015	8855524	8855938	415	110	86	0.0	-	GGAUUCUACUGUAGCUCCGUAAGUGCU	3	29	49	6	14	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9017659-9018085	Cluster_4269	Pocillopora_meandrina_HIv1___Sc0000015	9017659	9018085	427	427	62	1.0	+	GGGGGCAUAGCUCAGUGGUAGAGCAUU	207	11	344	20	21	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9071577-9072007	Cluster_4270	Pocillopora_meandrina_HIv1___Sc0000015	9071577	9072007	431	97678	297	0.9999897622801449	+	GCACUGGUGGUUCAGUGGUAGAAUUCU	61390	10	96890	5	33	43	697	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9072831-9073262	Cluster_4271	Pocillopora_meandrina_HIv1___Sc0000015	9072831	9073262	432	582565	885	1.0	+	GCACUGGUGGUUCAGUGGUAGAAUUCUCGCC	165666	38	581241	26	54	81	1125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9225605-9226032	Cluster_4272	Pocillopora_meandrina_HIv1___Sc0000015	9225605	9226032	428	343	253	0.0029154518950437317	-	AGAAAGUAGAAAAGGAAAUUCGUCGUUGGCU	8	78	167	23	36	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9227729-9228139	Cluster_4273	Pocillopora_meandrina_HIv1___Sc0000015	9227729	9228139	411	147	103	0.013605442176870748	-	GAAGGGUCUUGUGCUGAGCA	8	51	40	24	11	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:129098-129526	Cluster_4274	Pocillopora_meandrina_HIv1___Sc0000016	129098	129526	429	133	22	1.0	+	UGAGACCUGUCUGCAUUGAGCUUUAGUGU	85	2	130	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:166043-166473	Cluster_4275	Pocillopora_meandrina_HIv1___Sc0000016	166043	166473	431	148	51	0.972972972972973	+	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	56	0	144	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:302160-302585	Cluster_4276	Pocillopora_meandrina_HIv1___Sc0000016	302160	302585	426	103	37	0.9805825242718447	+	UGUGUAGAUAUGUCUUUUGGACAGGA	33	0	102	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:303144-303889	Cluster_4277	Pocillopora_meandrina_HIv1___Sc0000016	303144	303889	746	1374	420	0.8951965065502183	+	UGACGAUUGGUGUGAGUAGCUCAGCAC	93	7	1190	8	6	18	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:331685-332113	Cluster_4278	Pocillopora_meandrina_HIv1___Sc0000016	331685	332113	429	301	58	1.0	+	UGGAAUUCGAAGCAAGUAACAAUCGACA	95	3	296	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:336418-337344	Cluster_4279	Pocillopora_meandrina_HIv1___Sc0000016	336418	337344	927	711	326	0.9859353023909986	+	UAGGUAAUGGCACAAACUGAGAGGCGU	26	2	697	2	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:337943-338534	Cluster_4280	Pocillopora_meandrina_HIv1___Sc0000016	337943	338534	592	509	276	0.9214145383104125	+	UGCAAGAAGUACUGGGUUCACUGAGACC	19	2	491	2	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:338910-340012	Cluster_4281	Pocillopora_meandrina_HIv1___Sc0000016	338910	340012	1103	1790	648	0.9335195530726257	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	90	8	1672	9	11	34	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:357787-358213	Cluster_4282	Pocillopora_meandrina_HIv1___Sc0000016	357787	358213	427	175	123	0.17714285714285713	-	UGGUGGAGCGCUGCACCGGU	6	56	45	22	25	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:364050-364469	Cluster_4283	Pocillopora_meandrina_HIv1___Sc0000016	364050	364469	420	75	26	0.0	-	ACCCACUGCCAAGGAGCACUUUGAUGAAA	24	1	71	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:380560-380977	Cluster_4284	Pocillopora_meandrina_HIv1___Sc0000016	380560	380977	418	109	54	0.9174311926605505	+	UGAUACUUCAAGCACUCCUUUCCCAUU	24	1	99	1	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:399937-400370	Cluster_4285	Pocillopora_meandrina_HIv1___Sc0000016	399937	400370	434	200	93	0.26	.	UCACGGUAGUAGUGUUGUUCAAUAGACUG	33	2	179	0	1	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:408747-409166	Cluster_4286	Pocillopora_meandrina_HIv1___Sc0000016	408747	409166	420	359	205	0.5013927576601671	.	UGGAAUAAAGCAACUACGUG	25	245	8	82	18	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:411660-412086	Cluster_4287	Pocillopora_meandrina_HIv1___Sc0000016	411660	412086	427	154	64	0.9415584415584416	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	41	0	146	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:423085-423757	Cluster_4288	Pocillopora_meandrina_HIv1___Sc0000016	423085	423757	673	334	145	0.3652694610778443	.	UGUGAUUUCAACUGUGAGUGUCAGAA	17	7	230	2	3	31	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:429147-429883	Cluster_4289	Pocillopora_meandrina_HIv1___Sc0000016	429147	429883	737	298	146	0.003355704697986577	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	40	3	292	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:430237-430690	Cluster_4290	Pocillopora_meandrina_HIv1___Sc0000016	430237	430690	454	352	148	0.005681818181818182	-	UGACGGCCUUUCAUCUUUGACGCAAUGAUC	21	2	342	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:430801-431229	Cluster_4291	Pocillopora_meandrina_HIv1___Sc0000016	430801	431229	429	118	37	0.0	-	CUCUAGCACACUCGCACAAGUUAAAGGCA	27	2	115	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:449291-449715	Cluster_4292	Pocillopora_meandrina_HIv1___Sc0000016	449291	449715	425	182	81	0.027472527472527472	-	UGUAUCUCCAGCGUCUGAACAAGUCAUGU	33	13	143	9	7	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:461171-461580	Cluster_4293	Pocillopora_meandrina_HIv1___Sc0000016	461171	461580	410	122	49	0.9016393442622951	+	UGAUCAAACUUCUCACAUGCAAAGACUAU	20	1	113	0	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:515713-516345	Cluster_4294	Pocillopora_meandrina_HIv1___Sc0000016	515713	516345	633	367	275	0.9700272479564033	+	GUUGAUCGAGCAUUGCCCCGCGUGACU	7	104	134	23	43	31	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:519485-520144	Cluster_4295	Pocillopora_meandrina_HIv1___Sc0000016	519485	520144	660	424	270	0.9858490566037735	+	AGAGGGGGUAAGAGCGCU	16	115	169	38	31	32	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:700334-700759	Cluster_4296	Pocillopora_meandrina_HIv1___Sc0000016	700334	700759	426	85	29	0.2235294117647059	.	UUGGCACGUGUUGUUCCACAAAGAUAGAGU	38	1	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:705543-706139	Cluster_4297	Pocillopora_meandrina_HIv1___Sc0000016	705543	706139	597	191	32	0.010471204188481676	-	UACCAUAGAACUCACUUGAACAUUUCAUC	56	1	186	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:786273-786694	Cluster_4298	Pocillopora_meandrina_HIv1___Sc0000016	786273	786694	422	1022	42	0.9990215264187867	+	UCUGACGAGGGGCUGACACUCA	424	33	0	498	471	13	7	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:792205-792630	Cluster_4299	Pocillopora_meandrina_HIv1___Sc0000016	792205	792630	426	88	39	0.011363636363636364	-	UGUGUAGAUAUGUCUUUUGGACAGGA	22	0	88	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1497797-1498305	Cluster_4300	Pocillopora_meandrina_HIv1___Sc0000016	1497797	1498305	509	2138	230	0.05378858746492049	-	UGAGACAGUACACACGAUUUGAUAUA	511	5	2090	4	5	13	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1506420-1506847	Cluster_4301	Pocillopora_meandrina_HIv1___Sc0000016	1506420	1506847	428	196	88	0.923469387755102	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	81	1	186	1	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1508602-1509287	Cluster_4302	Pocillopora_meandrina_HIv1___Sc0000016	1508602	1509287	686	446	264	0.7825112107623319	.	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	27	4	373	5	9	22	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1509438-1510523	Cluster_4303	Pocillopora_meandrina_HIv1___Sc0000016	1509438	1510523	1086	1268	521	0.8296529968454258	+	UGAUGACUUUGGACUGAAACCAUGAACA	139	19	1130	7	26	28	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1528767-1529422	Cluster_4304	Pocillopora_meandrina_HIv1___Sc0000016	1528767	1529422	656	704	240	0.078125	-	UAAUGACUUCAGAGUAGACAGAGACGGU	79	5	672	9	3	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1530112-1530550	Cluster_4305	Pocillopora_meandrina_HIv1___Sc0000016	1530112	1530550	439	310	132	0.3774193548387097	.	AUAUCCUACAUCUUGUUCAGACGCUGACU	37	3	275	3	2	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1542070-1542496	Cluster_4306	Pocillopora_meandrina_HIv1___Sc0000016	1542070	1542496	427	94	21	1.0	+	AGGAUGGACUGUGUUCCAGAGGAGACUG	28	0	82	0	12	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1564855-1565893	Cluster_4307	Pocillopora_meandrina_HIv1___Sc0000016	1564855	1565893	1039	1256	602	0.6457006369426752	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	68	30	1087	14	17	28	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1567183-1567608	Cluster_4308	Pocillopora_meandrina_HIv1___Sc0000016	1567183	1567608	426	245	143	0.15918367346938775	-	CUUGGAUUGAUGCAGAAGUUAACA	15	2	211	4	1	5	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1961743-1963021	Cluster_4309	Pocillopora_meandrina_HIv1___Sc0000016	1961743	1963021	1279	4273	1199	0.4959045167329745	.	UGAACCAGGAACACUUCGAGCUUUGAUU	227	50	3864	59	45	53	202	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1963371-1964203	Cluster_4310	Pocillopora_meandrina_HIv1___Sc0000016	1963371	1964203	833	4336	899	0.7393911439114391	.	UGUGACUGAAAAGAUCUUGAAAGAACUUA	457	59	3870	36	33	76	262	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1964293-1964721	Cluster_4311	Pocillopora_meandrina_HIv1___Sc0000016	1964293	1964721	429	407	85	0.9336609336609336	+	AAACAGAAGACAAAGAUUGUUGAGACAGA	212	1	398	0	4	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1973703-1974132	Cluster_4312	Pocillopora_meandrina_HIv1___Sc0000016	1973703	1974132	430	136	42	0.0	-	UGAACGUCUGUGAGCGUCUGUACGCUUAUU	61	0	134	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1975076-1975490	Cluster_4313	Pocillopora_meandrina_HIv1___Sc0000016	1975076	1975490	415	148	66	0.006756756756756757	-	UGUUAACUCACCAUCUAAAACGAAUAGAUU	17	0	147	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1979755-1980183	Cluster_4314	Pocillopora_meandrina_HIv1___Sc0000016	1979755	1980183	429	138	31	0.0	-	UGUUUCAAAGGGAUUCAGUAAGAUUAAUA	69	13	122	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1980843-1982516	Cluster_4315	Pocillopora_meandrina_HIv1___Sc0000016	1980843	1982516	1674	3948	1098	0.028368794326241134	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	246	26	3752	11	42	48	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1983933-1984362	Cluster_4316	Pocillopora_meandrina_HIv1___Sc0000016	1983933	1984362	430	224	110	0.004464285714285714	-	UGCACCGGUCUUUUUCGAGUCACUGACUUUU	27	3	217	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1985561-1987465	Cluster_4317	Pocillopora_meandrina_HIv1___Sc0000016	1985561	1987465	1905	10015	1603	0.08377433849226161	-	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCG	607	86	9292	60	41	107	429	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1987756-1988161	Cluster_4318	Pocillopora_meandrina_HIv1___Sc0000016	1987756	1988161	406	107	56	0.07476635514018691	-	UGGGUGGACUGUUCUUCAUGCAGAAGUAC	32	4	98	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1988558-1988986	Cluster_4319	Pocillopora_meandrina_HIv1___Sc0000016	1988558	1988986	429	1381	127	0.026792179580014484	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	839	0	1353	0	3	1	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1992010-1992438	Cluster_4320	Pocillopora_meandrina_HIv1___Sc0000016	1992010	1992438	429	112	38	0.017857142857142856	-	UGCCAUCUUGAAGAUCUGUGUGCACCAUC	58	1	102	1	6	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1992665-1994013	Cluster_4321	Pocillopora_meandrina_HIv1___Sc0000016	1992665	1994013	1349	12095	1496	0.019429516329061595	-	UGUAACAUUUUGCAUCGAUCGACGGUACA	1379	69	11705	115	29	50	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1994460-1994876	Cluster_4322	Pocillopora_meandrina_HIv1___Sc0000016	1994460	1994876	417	227	114	0.02643171806167401	-	UAGCACAUCAAGGCAGUCAAAGAACUAGUC	29	0	212	2	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1995076-1995817	Cluster_4323	Pocillopora_meandrina_HIv1___Sc0000016	1995076	1995817	742	1202	313	0.0016638935108153079	-	ACGGCAACUUCUCAUCUGUAACCUGCAC	196	8	1146	7	2	6	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1997036-1997988	Cluster_4324	Pocillopora_meandrina_HIv1___Sc0000016	1997036	1997988	953	679	352	0.027982326951399118	-	UCGGUGACGAAGGUAAAUAACUAAUGACGU	60	21	618	5	2	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1998333-1999692	Cluster_4325	Pocillopora_meandrina_HIv1___Sc0000016	1998333	1999692	1360	18410	1487	0.04513851167843563	-	UCUGCCGGGAGCUUCUUGUAGAAGACGG	1172	91	17200	55	59	290	715	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1999724-2000612	Cluster_4326	Pocillopora_meandrina_HIv1___Sc0000016	1999724	2000612	889	572	252	0.0	-	UGAUUAUCCGUCUUGGUUAGAAGUUUGCC	34	12	539	3	4	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2000859-2002047	Cluster_4327	Pocillopora_meandrina_HIv1___Sc0000016	2000859	2002047	1189	1067	416	0.0	-	UUUCCAACAUCUGCAGGCGAGACUGC	53	14	1026	4	6	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2004356-2005245	Cluster_4328	Pocillopora_meandrina_HIv1___Sc0000016	2004356	2005245	890	1450	458	0.000689655172413793	-	UGAGAACUGCUGAUUGGGCUACAAGAUCGC	151	6	1171	4	12	210	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2005475-2006329	Cluster_4329	Pocillopora_meandrina_HIv1___Sc0000016	2005475	2006329	855	3149	299	0.43791679898380437	.	GAUUGGAACAGUCAUCAGACGGGUGGACA	417	83	2956	6	13	37	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2007743-2008172	Cluster_4330	Pocillopora_meandrina_HIv1___Sc0000016	2007743	2008172	430	193	58	0.010362694300518135	-	UGCUGAACAUUGCUCUUCUAAGAAGAUGAC	46	1	175	1	0	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2009468-2010665	Cluster_4331	Pocillopora_meandrina_HIv1___Sc0000016	2009468	2010665	1198	1819	486	0.31500824628916985	.	UUUCCGUUGCAUUAGAGGACUUCUUGUC	193	26	1513	29	27	38	186	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2011248-2011657	Cluster_4332	Pocillopora_meandrina_HIv1___Sc0000016	2011248	2011657	410	125	60	0.568	.	GUGGAGUUAAUCGUAAGGGAACA	12	2	99	1	0	19	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2011707-2012152	Cluster_4333	Pocillopora_meandrina_HIv1___Sc0000016	2011707	2012152	446	2035	155	0.1769041769041769	-	UGCGAUAAUAAAAUUCCAGGACUUUCCAGG	510	2	1815	3	9	65	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2012397-2013189	Cluster_4334	Pocillopora_meandrina_HIv1___Sc0000016	2012397	2013189	793	1066	460	0.08348968105065666	-	UAAAGUAUCAUUCCUCGUCACGAACCCG	37	13	983	6	3	15	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2013194-2013707	Cluster_4335	Pocillopora_meandrina_HIv1___Sc0000016	2013194	2013707	514	441	219	0.05895691609977324	-	UCAACUUUCUGGUAGUCUAACUGCUGUU	29	4	413	3	2	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2014002-2014750	Cluster_4336	Pocillopora_meandrina_HIv1___Sc0000016	2014002	2014750	749	775	246	0.02967741935483871	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	65	2	755	4	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2015470-2015897	Cluster_4337	Pocillopora_meandrina_HIv1___Sc0000016	2015470	2015897	428	108	8	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	69	0	108	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2018256-2020804	Cluster_4338	Pocillopora_meandrina_HIv1___Sc0000016	2018256	2020804	2549	6601	2068	0.08771398272988941	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	253	75	5961	43	64	205	253	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2020868-2021282	Cluster_4339	Pocillopora_meandrina_HIv1___Sc0000016	2020868	2021282	415	125	74	0.024	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	11	2	113	2	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2021407-2022449	Cluster_4340	Pocillopora_meandrina_HIv1___Sc0000016	2021407	2022449	1043	1054	396	0.3092979127134725	.	CAACUUCGCAAAGACCUGACAAGA	59	18	853	54	6	26	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2028106-2028519	Cluster_4341	Pocillopora_meandrina_HIv1___Sc0000016	2028106	2028519	414	82	49	1.0	+	AAAGGUAACUACUGUAGGCU	9	32	23	18	5	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2030384-2031292	Cluster_4342	Pocillopora_meandrina_HIv1___Sc0000016	2030384	2031292	909	1561	614	0.07751441383728379	-	UAAUGAAGUCGUAAUUUGUCCAUCC	80	10	1480	3	12	14	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2031608-2032028	Cluster_4343	Pocillopora_meandrina_HIv1___Sc0000016	2031608	2032028	421	190	93	0.015789473684210527	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	20	0	182	0	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2032247-2032679	Cluster_4344	Pocillopora_meandrina_HIv1___Sc0000016	2032247	2032679	433	314	115	0.08280254777070063	-	UACGUGUAGAAAGCCUUCUCUGACAUC	25	2	292	1	2	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2044454-2044862	Cluster_4345	Pocillopora_meandrina_HIv1___Sc0000016	2044454	2044862	409	84	36	0.13095238095238096	-	UAAUCUGACAUAAACUACCUAGGCACGAGG	25	2	73	0	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2046027-2046437	Cluster_4346	Pocillopora_meandrina_HIv1___Sc0000016	2046027	2046437	411	94	49	0.010638297872340425	-	UGAUUUAGAACUUGUGAACUGUACUAUGCU	13	3	89	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2047355-2048281	Cluster_4347	Pocillopora_meandrina_HIv1___Sc0000016	2047355	2048281	927	6992	879	0.7405606407322655	.	UGUGAUUGCAUGGCUGGUCUUGGAGAGAGC	1164	87	5921	78	68	251	587	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2049709-2052600	Cluster_4348	Pocillopora_meandrina_HIv1___Sc0000016	2049709	2052600	2892	31777	5371	0.011612172325896088	-	UGGUCUCACGAACUUCUUUUUUUCAAGA	1511	176	30760	161	81	229	370	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2052862-2053462	Cluster_4349	Pocillopora_meandrina_HIv1___Sc0000016	2052862	2053462	601	1966	463	0.3463886063072228	.	CGUACCUAAAUCUGUGAAUCCUGAACUUCC	139	76	1770	11	15	43	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2054561-2055417	Cluster_4350	Pocillopora_meandrina_HIv1___Sc0000016	2054561	2055417	857	657	200	0.6164383561643836	.	UCACGAUUUUGAAUGGUAUGGGCA	101	21	459	5	8	33	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2057548-2059148	Cluster_4351	Pocillopora_meandrina_HIv1___Sc0000016	2057548	2059148	1601	1345	490	0.04981412639405204	-	UCGAAACAUUUUUCGACGGCCUGUAUUCGC	56	23	1299	4	4	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2059175-2059856	Cluster_4352	Pocillopora_meandrina_HIv1___Sc0000016	2059175	2059856	682	381	174	0.0026246719160104987	-	UGAUCAAGGAGCUCUUUAGCUUUAACCCU	26	2	365	2	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2059892-2060823	Cluster_4353	Pocillopora_meandrina_HIv1___Sc0000016	2059892	2060823	932	737	311	0.004070556309362279	-	UGCAUUUUUCCGAUAUAGAGCUGGACGU	47	6	719	4	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2061622-2062935	Cluster_4354	Pocillopora_meandrina_HIv1___Sc0000016	2061622	2062935	1314	7419	1534	0.007682976142337242	-	UGUGCAUUCAGGUUUGUCAUUGUCAAUAAC	574	51	7036	24	90	153	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2062992-2064048	Cluster_4355	Pocillopora_meandrina_HIv1___Sc0000016	2062992	2064048	1057	2004	692	0.015469061876247504	-	UGGGAACAUCUUUGAAGUCAUUUUUAUG	78	26	1885	14	20	33	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2064707-2065899	Cluster_4356	Pocillopora_meandrina_HIv1___Sc0000016	2064707	2065899	1193	3185	851	0.23767660910518054	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	640	25	2879	15	128	55	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2067316-2069300	Cluster_4357	Pocillopora_meandrina_HIv1___Sc0000016	2067316	2069300	1985	4866	1459	0.770242498972462	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	245	64	4135	30	31	136	470	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2069353-2070005	Cluster_4358	Pocillopora_meandrina_HIv1___Sc0000016	2069353	2070005	653	2553	471	0.03407755581668625	-	UGUUUCAAAGAAAGUCACUAAGACUGAGA	255	26	2471	2	20	22	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2070375-2070801	Cluster_4359	Pocillopora_meandrina_HIv1___Sc0000016	2070375	2070801	427	163	79	0.03680981595092025	-	UCACAUGUAGGUACCAGAUCUCUUCAAAG	17	3	152	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2071265-2073720	Cluster_4360	Pocillopora_meandrina_HIv1___Sc0000016	2071265	2073720	2456	12048	2923	0.03901062416998672	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	458	121	10938	61	102	206	620	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2074388-2074880	Cluster_4361	Pocillopora_meandrina_HIv1___Sc0000016	2074388	2074880	493	445	189	0.21348314606741572	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	97	10	387	15	11	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2075275-2075720	Cluster_4362	Pocillopora_meandrina_HIv1___Sc0000016	2075275	2075720	446	312	110	0.02564102564102564	-	UCCGACUUAUUAUAAUUCUUGAAAGACUGA	26	1	302	3	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2076668-2077241	Cluster_4363	Pocillopora_meandrina_HIv1___Sc0000016	2076668	2077241	574	2625	303	0.0064761904761904765	-	UGUUUCUUUUUAAGUCUAUGUAAGUCCACU	733	11	2561	13	14	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2078691-2079504	Cluster_4364	Pocillopora_meandrina_HIv1___Sc0000016	2078691	2079504	814	450	247	0.08444444444444445	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	24	3	418	1	4	3	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2081725-2082293	Cluster_4365	Pocillopora_meandrina_HIv1___Sc0000016	2081725	2082293	569	5963	504	0.007043434512829113	-	UGUCAAAUUCUCAUCUUCCUAAGCUUU	1208	46	5804	49	10	15	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2083077-2083505	Cluster_4366	Pocillopora_meandrina_HIv1___Sc0000016	2083077	2083505	429	209	82	0.215311004784689	.	UUUUUGCUGAGUUGGCUACCAUGG	27	1	162	1	5	1	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2083699-2084123	Cluster_4367	Pocillopora_meandrina_HIv1___Sc0000016	2083699	2084123	425	154	61	0.08441558441558442	-	UCCAUAACUAUUUCUUGUUCCAGCU	24	2	143	0	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2086534-2086961	Cluster_4368	Pocillopora_meandrina_HIv1___Sc0000016	2086534	2086961	428	150	42	0.03333333333333333	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	41	1	146	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2087543-2088032	Cluster_4369	Pocillopora_meandrina_HIv1___Sc0000016	2087543	2088032	490	3538	348	0.0	-	UUCCUGCAGAUAUUUGAGCCAGAUAUAUAUG	555	357	2861	18	18	39	245	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2088101-2089388	Cluster_4370	Pocillopora_meandrina_HIv1___Sc0000016	2088101	2089388	1288	2658	452	0.002257336343115124	-	UAAACCUCUUGGCAAUAUAAGAUAACUCA	503	21	2598	6	7	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2089561-2090649	Cluster_4371	Pocillopora_meandrina_HIv1___Sc0000016	2089561	2090649	1089	796	337	0.0	-	UUUUGCUUCUCCAGCUGUAGUUCUUGG	46	8	774	5	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2090934-2091801	Cluster_4372	Pocillopora_meandrina_HIv1___Sc0000016	2090934	2091801	868	2375	248	0.004210526315789474	-	UAGGGUGCAACACCAUCUGUAUUGAAUGAG	619	0	2360	0	5	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2098714-2100470	Cluster_4373	Pocillopora_meandrina_HIv1___Sc0000016	2098714	2100470	1757	3520	829	0.0011363636363636363	-	UACAAGGCCAUCUAAAAUAGAAUCAAU	426	23	3408	7	13	43	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2100713-2101564	Cluster_4374	Pocillopora_meandrina_HIv1___Sc0000016	2100713	2101564	852	3698	598	0.0005408328826392645	-	UGACAUCAGCUCUGUGACUCUUUUGG	561	25	3410	4	19	83	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2101591-2102134	Cluster_4375	Pocillopora_meandrina_HIv1___Sc0000016	2101591	2102134	544	664	179	0.0	-	UCCUAGAUGUAUGAUGACUGAGCAUUUCAU	36	4	620	1	4	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2107776-2108200	Cluster_4376	Pocillopora_meandrina_HIv1___Sc0000016	2107776	2108200	425	139	54	0.0	-	UAUGGUGUGCUAGUCAGACAAGUCACUGAU	22	3	131	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2108797-2109222	Cluster_4377	Pocillopora_meandrina_HIv1___Sc0000016	2108797	2109222	426	87	40	0.0	-	UGUGAACUUCUUUCUGACCUGUGAAUGC	13	0	86	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2109276-2109705	Cluster_4378	Pocillopora_meandrina_HIv1___Sc0000016	2109276	2109705	430	101	31	0.0	-	UGAUUUAAAGUUACUGUAUGAGCUAGCUGU	44	1	98	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2155127-2155546	Cluster_4379	Pocillopora_meandrina_HIv1___Sc0000016	2155127	2155546	420	129	67	0.937984496124031	+	UUUGAUCGGUUUUGGCGUGU	21	79	6	38	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2330302-2330730	Cluster_4380	Pocillopora_meandrina_HIv1___Sc0000016	2330302	2330730	429	85	15	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	0	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2345038-2345465	Cluster_4381	Pocillopora_meandrina_HIv1___Sc0000016	2345038	2345465	428	102	14	0.0196078431372549	-	AACUACUGCUCGUGCUCUAGAUAUGACA	76	2	98	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2383238-2383667	Cluster_4382	Pocillopora_meandrina_HIv1___Sc0000016	2383238	2383667	430	318	114	0.7138364779874213	.	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	76	40	263	7	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2403204-2403628	Cluster_4383	Pocillopora_meandrina_HIv1___Sc0000016	2403204	2403628	425	85	33	0.011764705882352941	-	UGUGUAGAUAUGUCUUUUGGACAGGA	33	0	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2869347-2869910	Cluster_4384	Pocillopora_meandrina_HIv1___Sc0000016	2869347	2869910	564	513	324	0.9785575048732943	+	UUUUGAACAGGAUCGAGGCU	9	112	268	37	31	23	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2977687-2978110	Cluster_4385	Pocillopora_meandrina_HIv1___Sc0000016	2977687	2978110	424	104	39	0.0	-	ACUGAGAUUCUGGCUGGAUUGUUCC	16	3	88	0	1	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2998303-2998837	Cluster_4386	Pocillopora_meandrina_HIv1___Sc0000016	2998303	2998837	535	778	343	0.0	-	UAGGUCUGAUGCUGAAUAGGUUGUCACAAUU	84	159	460	29	46	46	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3036412-3036839	Cluster_4387	Pocillopora_meandrina_HIv1___Sc0000016	3036412	3036839	428	249	99	0.4738955823293173	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	42	8	224	3	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3090988-3091978	Cluster_4388	Pocillopora_meandrina_HIv1___Sc0000016	3090988	3091978	991	1700	586	0.8894117647058823	+	UUUGCUGAGAUACAUUUUCCUUCUGA	62	15	1495	3	17	63	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3094680-3095109	Cluster_4389	Pocillopora_meandrina_HIv1___Sc0000016	3094680	3095109	430	210	82	0.9380952380952381	+	UAAUCCCAGGUCUUGUAUUGUAAUACUUCA	74	0	201	2	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3210812-3211240	Cluster_4390	Pocillopora_meandrina_HIv1___Sc0000016	3210812	3211240	429	1374	145	0.9759825327510917	+	UUCAGAUAUUUCAGCUGCGAGAUUGA	660	7	1352	1	6	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3211324-3212437	Cluster_4391	Pocillopora_meandrina_HIv1___Sc0000016	3211324	3212437	1114	3506	778	0.8639475185396464	+	UGUGGUAGACUUGUUUUUGACAUGGCA	167	109	2955	60	74	154	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3214743-3215576	Cluster_4392	Pocillopora_meandrina_HIv1___Sc0000016	3214743	3215576	834	348	143	0.020114942528735632	-	UGACAUUGUUCCUUCAACUGUUUUUUGAC	34	0	337	0	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3215721-3216149	Cluster_4393	Pocillopora_meandrina_HIv1___Sc0000016	3215721	3216149	429	145	32	0.0	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	73	0	143	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3276360-3276777	Cluster_4394	Pocillopora_meandrina_HIv1___Sc0000016	3276360	3276777	418	101	2	0.0	-	AAGGUGAACAAAGCGAUA	82	101	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3425021-3425524	Cluster_4395	Pocillopora_meandrina_HIv1___Sc0000016	3425021	3425524	504	1970	178	0.007106598984771574	-	AGGAUGGACAGUGAUCCAGAAGAGGACGGA	691	95	1748	18	88	15	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3486771-3487190	Cluster_4396	Pocillopora_meandrina_HIv1___Sc0000016	3486771	3487190	420	129	25	0.9612403100775194	+	CGGCCUGAAAAAAAAAAAA	30	82	23	13	6	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3529474-3529904	Cluster_4397	Pocillopora_meandrina_HIv1___Sc0000016	3529474	3529904	431	373	111	0.8659517426273459	+	GGGAUGGACAGUGAUCCAGAAGAGAAUGGA	48	17	304	29	17	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3635522-3635950	Cluster_4398	Pocillopora_meandrina_HIv1___Sc0000016	3635522	3635950	429	131	46	0.9847328244274809	+	AUGGACAGUGAUCCAGAAGAGAAUGGAUG	28	3	120	4	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3640180-3640599	Cluster_4399	Pocillopora_meandrina_HIv1___Sc0000016	3640180	3640599	420	84	32	0.011904761904761904	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	20	0	83	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3672349-3672777	Cluster_4400	Pocillopora_meandrina_HIv1___Sc0000016	3672349	3672777	429	238	102	0.8151260504201681	+	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	51	28	175	22	6	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3736896-3737396	Cluster_4401	Pocillopora_meandrina_HIv1___Sc0000016	3736896	3737396	501	431	157	0.0069605568445475635	-	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	56	61	290	17	20	26	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3786097-3786594	Cluster_4402	Pocillopora_meandrina_HIv1___Sc0000016	3786097	3786594	498	301	107	0.8637873754152824	+	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	71	18	266	11	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3853179-3853635	Cluster_4403	Pocillopora_meandrina_HIv1___Sc0000016	3853179	3853635	457	417	172	0.7985611510791367	.	UGAAGAGUAUCACGAUUUCUGUCCACAAUGC	43	7	379	4	8	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3853803-3854408	Cluster_4404	Pocillopora_meandrina_HIv1___Sc0000016	3853803	3854408	606	1299	333	0.745958429561201	.	UUUGACGGAAACAGUUAUGGACGGAUCC	63	20	969	28	54	120	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3877356-3877856	Cluster_4405	Pocillopora_meandrina_HIv1___Sc0000016	3877356	3877856	501	287	104	0.010452961672473868	-	GGGAUGGACAGUGAUCCAGGAGAAAAUGG	25	69	175	18	7	15	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3880780-3881529	Cluster_4406	Pocillopora_meandrina_HIv1___Sc0000016	3880780	3881529	750	2237	614	0.09521680822530175	-	UCAUCUGGUGUGAUUGUAUCGUGUGCAC	162	16	2113	6	32	24	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3881973-3882392	Cluster_4407	Pocillopora_meandrina_HIv1___Sc0000016	3881973	3882392	420	145	78	0.14482758620689656	-	UAAAUCUCUCGGGUCAAUACAGAUGCGUA	13	4	137	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3882866-3883290	Cluster_4408	Pocillopora_meandrina_HIv1___Sc0000016	3882866	3883290	425	129	84	0.12403100775193798	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	12	2	113	0	0	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3884381-3884802	Cluster_4409	Pocillopora_meandrina_HIv1___Sc0000016	3884381	3884802	422	129	71	0.08527131782945736	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	14	0	120	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3960711-3961139	Cluster_4410	Pocillopora_meandrina_HIv1___Sc0000016	3960711	3961139	429	217	76	0.7972350230414746	.	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	46	11	167	28	6	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3965357-3965785	Cluster_4411	Pocillopora_meandrina_HIv1___Sc0000016	3965357	3965785	429	150	43	0.006666666666666667	-	GGGAUGGACAGUGAUCCAGGAGAAAAUGG	28	19	125	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3984663-3985964	Cluster_4412	Pocillopora_meandrina_HIv1___Sc0000016	3984663	3985964	1302	2609	648	0.9543886546569567	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	217	4	2517	6	18	20	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4504286-4505176	Cluster_4413	Pocillopora_meandrina_HIv1___Sc0000016	4504286	4505176	891	1750	439	0.9508571428571428	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	228	5	1699	1	10	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4870761-4871167	Cluster_4414	Pocillopora_meandrina_HIv1___Sc0000016	4870761	4871167	407	98	50	0.23469387755102042	.	UUGGCUCCGAAUGAAAGAUCUUGAAUUACA	16	1	89	2	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4964957-4965385	Cluster_4415	Pocillopora_meandrina_HIv1___Sc0000016	4964957	4965385	429	178	34	0.1404494382022472	-	AAAUGAAGCUCUCUUUGGUGAAAAUGUUG	80	0	175	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5158486-5158914	Cluster_4416	Pocillopora_meandrina_HIv1___Sc0000016	5158486	5158914	429	306	75	0.0	-	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	62	0	294	0	5	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5159620-5160222	Cluster_4417	Pocillopora_meandrina_HIv1___Sc0000016	5159620	5160222	603	1304	195	0.003067484662576687	-	UCCAAUCCCCACCGAGAAAGUAUUCAAUAUU	549	6	1283	3	0	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5258006-5258425	Cluster_4418	Pocillopora_meandrina_HIv1___Sc0000016	5258006	5258425	420	183	102	0.0	-	GUGCAUGGCUCAGGAUCGCUUGUGAGGAGA	16	69	81	7	13	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5309990-5310407	Cluster_4419	Pocillopora_meandrina_HIv1___Sc0000016	5309990	5310407	418	126	77	0.9682539682539683	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	11	1	115	2	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5310474-5311519	Cluster_4420	Pocillopora_meandrina_HIv1___Sc0000016	5310474	5311519	1046	2514	754	0.9427207637231504	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	285	36	2349	16	32	30	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5311535-5313022	Cluster_4421	Pocillopora_meandrina_HIv1___Sc0000016	5311535	5313022	1488	4004	1313	0.8978521478521478	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	146	45	3548	35	41	170	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5321552-5321971	Cluster_4422	Pocillopora_meandrina_HIv1___Sc0000016	5321552	5321971	420	154	101	0.9935064935064936	+	CAGUUGAGCUCUGGGAAGCCCA	9	57	38	12	26	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5324658-5325073	Cluster_4423	Pocillopora_meandrina_HIv1___Sc0000016	5324658	5325073	416	357	253	1.0	+	CGUGCUAGAGCUGUGUGAGGA	6	92	126	32	46	23	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5325764-5326185	Cluster_4424	Pocillopora_meandrina_HIv1___Sc0000016	5325764	5326185	422	311	223	1.0	+	GCCUUGUAGUAAGCAGAUGACA	16	73	118	29	36	25	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5327727-5328217	Cluster_4425	Pocillopora_meandrina_HIv1___Sc0000016	5327727	5328217	491	441	322	0.9909297052154195	+	UCCGUCUGGGGCUGUUUCUGUGAAGAU	6	113	189	40	41	30	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5329153-5329572	Cluster_4426	Pocillopora_meandrina_HIv1___Sc0000016	5329153	5329572	420	219	163	1.0	+	CGUGUACUCGGACUUACAUUCUGCA	8	43	92	26	17	16	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5329738-5330156	Cluster_4427	Pocillopora_meandrina_HIv1___Sc0000016	5329738	5330156	419	237	177	1.0	+	CCACUGGAGAACUAAACGU	15	85	63	30	30	14	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5330505-5330925	Cluster_4428	Pocillopora_meandrina_HIv1___Sc0000016	5330505	5330925	421	362	246	0.9972375690607734	+	GCGCAGGCAAGCUGGACU	18	119	111	39	22	44	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5331199-5331606	Cluster_4429	Pocillopora_meandrina_HIv1___Sc0000016	5331199	5331606	408	419	333	1.0	+	UGGACCUUGCUGAGUACGGACA	7	99	164	27	49	42	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5331757-5332175	Cluster_4430	Pocillopora_meandrina_HIv1___Sc0000016	5331757	5332175	419	399	299	1.0	+	GAUUCAACAGAACUGCUGA	5	98	147	47	30	48	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5332327-5333027	Cluster_4431	Pocillopora_meandrina_HIv1___Sc0000016	5332327	5333027	701	809	574	0.9975278121137207	+	GUUGAACUCUGAGACUGAAAAAGGACU	12	201	378	71	55	55	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5333537-5334267	Cluster_4432	Pocillopora_meandrina_HIv1___Sc0000016	5333537	5334267	731	859	607	0.9988358556461001	+	UUCUGUCGAUGUCUUGCCCGGAACAGCA	12	187	394	84	77	55	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5334965-5335386	Cluster_4433	Pocillopora_meandrina_HIv1___Sc0000016	5334965	5335386	422	352	247	1.0	+	CCCAUAGUUGGAAAUGUAACCGUC	10	91	129	17	28	47	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5335782-5336460	Cluster_4434	Pocillopora_meandrina_HIv1___Sc0000016	5335782	5336460	679	716	545	1.0	+	AAACAGUUGCGUGCUUUAGAUGUU	6	152	314	68	68	52	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5337451-5337870	Cluster_4435	Pocillopora_meandrina_HIv1___Sc0000016	5337451	5337870	420	412	302	1.0	+	GAAGACUCUCGAGGAACU	6	92	209	42	22	18	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5338024-5339073	Cluster_4436	Pocillopora_meandrina_HIv1___Sc0000016	5338024	5339073	1050	1087	760	1.0	+	AAAACUAAGGCUGUAGUUAUGGCAGAUA	11	255	533	79	77	70	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5339267-5340211	Cluster_4437	Pocillopora_meandrina_HIv1___Sc0000016	5339267	5340211	945	936	701	0.9989316239316239	+	CUCUAUCCAAACUGUUAAUGCUCCACGAU	35	198	467	71	64	64	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5340851-5341260	Cluster_4438	Pocillopora_meandrina_HIv1___Sc0000016	5340851	5341260	410	329	241	1.0	+	GAUAAGCGCUUACAACCUGACUAA	5	81	120	38	27	25	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5341532-5342012	Cluster_4439	Pocillopora_meandrina_HIv1___Sc0000016	5341532	5342012	481	644	420	1.0	+	CGACGAGGAUUGCUGAAAGCUAAGA	15	134	293	61	62	41	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5342025-5342789	Cluster_4440	Pocillopora_meandrina_HIv1___Sc0000016	5342025	5342789	765	849	610	0.9988221436984688	+	CUCGGACUAGGAACUACU	9	222	370	63	66	70	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5343095-5343501	Cluster_4441	Pocillopora_meandrina_HIv1___Sc0000016	5343095	5343501	407	413	306	1.0	+	GGAGAUCGUCUGCGAUGUCGAGCA	10	124	164	35	21	29	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5343803-5344294	Cluster_4442	Pocillopora_meandrina_HIv1___Sc0000016	5343803	5344294	492	364	267	1.0	+	GACCGAAUUUGUGGACUCUUGGGAGGU	6	97	139	42	28	31	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5344478-5344941	Cluster_4443	Pocillopora_meandrina_HIv1___Sc0000016	5344478	5344941	464	578	404	0.9982698961937716	+	GGGGCUUUUGAGCAUCUGAAGUU	8	110	270	51	40	55	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5345592-5346596	Cluster_4444	Pocillopora_meandrina_HIv1___Sc0000016	5345592	5346596	1005	968	633	0.9989669421487604	+	CUUCUCGAUGUUCGAAGAGUAGACUUCAUGA	12	230	440	71	76	86	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6183757-6184315	Cluster_4445	Pocillopora_meandrina_HIv1___Sc0000016	6183757	6184315	559	244	87	0.26229508196721313	.	UGAUUUCUGAUGGAGACUCUAAGUCUU	29	2	225	0	4	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6353412-6353839	Cluster_4446	Pocillopora_meandrina_HIv1___Sc0000016	6353412	6353839	428	673	63	0.9777117384843982	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	334	4	662	1	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6424951-6425358	Cluster_4447	Pocillopora_meandrina_HIv1___Sc0000016	6424951	6425358	408	124	81	0.024193548387096774	-	UCGGUCUGUUUGAAGACACCAACUUGUGCGC	10	16	84	7	8	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6523026-6523703	Cluster_4448	Pocillopora_meandrina_HIv1___Sc0000016	6523026	6523703	678	8313	530	0.0027667508721279923	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2222	6	8193	4	47	31	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6523781-6524266	Cluster_4449	Pocillopora_meandrina_HIv1___Sc0000016	6523781	6524266	486	381	239	0.2335958005249344	.	UCUUUCAGUCACUUAGAAGCCUCCAGG	10	8	310	4	7	21	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6558913-6563484	Cluster_4450	Pocillopora_meandrina_HIv1___Sc0000016	6558913	6563484	4572	12108	3678	0.08713247439709283	-	UGACUCUUCAAUCUCUGAAACGACUGCUC	505	126	11136	45	73	255	473	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6777920-6778642	Cluster_4451	Pocillopora_meandrina_HIv1___Sc0000016	6777920	6778642	723	443	150	0.36794582392776526	.	CAAAGUCUCAAUUACCCACUGUCAUUG	62	11	377	5	4	15	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6879376-6880291	Cluster_4452	Pocillopora_meandrina_HIv1___Sc0000016	6879376	6880291	916	972	221	0.11625514403292181	-	UGUGACAGCUCUUUUCCUCCUGCAAAGA	155	5	853	4	15	71	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6885317-6885815	Cluster_4453	Pocillopora_meandrina_HIv1___Sc0000016	6885317	6885815	499	302	82	0.9304635761589404	+	UUGGAACGUGUUGCUGAACGCUUGCUA	52	7	287	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6906122-6906540	Cluster_4454	Pocillopora_meandrina_HIv1___Sc0000016	6906122	6906540	419	316	7	0.9968354430379747	+	CAUUAAUGCUGUAGGUGAA	274	315	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6944636-6945049	Cluster_4455	Pocillopora_meandrina_HIv1___Sc0000016	6944636	6945049	414	118	88	1.0	+	AGCUAACCGAAGAAAGACAACUGGAACCGGC	4	34	44	15	10	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7162884-7163339	Cluster_4456	Pocillopora_meandrina_HIv1___Sc0000016	7162884	7163339	456	1828	229	0.08807439824945296	-	UAAGAAAUCUUCCACUGAUCGUUGAGUU	341	21	1737	10	10	17	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7271419-7271841	Cluster_4457	Pocillopora_meandrina_HIv1___Sc0000016	7271419	7271841	423	183	15	1.0	+	UGAUCCUAAAGCAUUUUCUGAAG	80	1	2	3	78	99	0	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7549557-7549654	Cluster_4458	Pocillopora_meandrina_HIv1___Sc0000016	7549557	7549654	98	19449	325	1.0	+	UCAGUUCCACCAGCUCACCAAU	5637	2091	16	980	9127	7198	37	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7549905-7550358	Cluster_4459	Pocillopora_meandrina_HIv1___Sc0000016	7549905	7550358	454	12327	269	0.9999188772612964	+	UCAGUUCCACCAGCUCACCAAU	3511	1163	35	992	5407	4583	147	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7550593-7550685	Cluster_4460	Pocillopora_meandrina_HIv1___Sc0000016	7550593	7550685	93	88562	508	1.0	+	UCAGUCCCACCAUCUCACCAAU	40423	12728	185	7581	60306	7479	283	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7553282-7553379	Cluster_4461	Pocillopora_meandrina_HIv1___Sc0000016	7553282	7553379	98	5095	233	0.9998037291462217	+	AGGUGAGCUGUGGGAACUCUUA	2489	390	37	804	3219	555	90	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7555639-7555733	Cluster_4462	Pocillopora_meandrina_HIv1___Sc0000016	7555639	7555733	95	15886	277	1.0	+	UCAGUCCCACCAGCUCACCAAU	3822	3439	42	3681	5604	3058	62	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7556180-7556602	Cluster_4463	Pocillopora_meandrina_HIv1___Sc0000016	7556180	7556602	423	609	87	0.9983579638752053	+	UCAGUUCCACCAGCUCACCAAUA	161	66	27	32	246	233	5	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7702668-7703451	Cluster_4464	Pocillopora_meandrina_HIv1___Sc0000016	7702668	7703451	784	2498	180	0.03242594075260208	-	UCGGACUGUGCAUAACCAUUUGCAAAC	1247	102	2211	5	4	69	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7737325-7737742	Cluster_4465	Pocillopora_meandrina_HIv1___Sc0000016	7737325	7737742	418	91	25	0.9340659340659341	+	GGAGGGGGAGAGCUCUCUUG	47	77	5	2	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7925013-7925738	Cluster_4466	Pocillopora_meandrina_HIv1___Sc0000016	7925013	7925738	726	727	250	0.07015130674002751	-	UGAUAAACCUGUAGCUGAAGCUUCUGC	75	6	677	10	15	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7981204-7981630	Cluster_4467	Pocillopora_meandrina_HIv1___Sc0000016	7981204	7981630	427	85	24	0.0	-	CAGUAUCCUUGUCUUCUGUUGAUGUGUC	21	0	83	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8190424-8190842	Cluster_4468	Pocillopora_meandrina_HIv1___Sc0000016	8190424	8190842	419	211	105	0.9715639810426541	+	UUCCAACAUUAGUAAAAGGUG	20	2	186	22	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8193241-8193668	Cluster_4469	Pocillopora_meandrina_HIv1___Sc0000016	8193241	8193668	428	171	72	0.9532163742690059	+	UGAAUGCGUAACAUAACUCCGAUCGAGU	31	4	164	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8194373-8194774	Cluster_4470	Pocillopora_meandrina_HIv1___Sc0000016	8194373	8194774	402	139	83	0.9496402877697842	+	UAUUGUGCAGAUUUGAUGCCCAGGGCUUC	9	10	118	1	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8231118-8231587	Cluster_4471	Pocillopora_meandrina_HIv1___Sc0000016	8231118	8231587	470	230	106	0.691304347826087	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	24	9	183	1	1	15	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8250842-8251332	Cluster_4472	Pocillopora_meandrina_HIv1___Sc0000016	8250842	8251332	491	1019	213	0.04317958783120707	-	UGUAAUCUCAAUAUCUACCUCUUGACA	246	6	975	4	23	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8251375-8252098	Cluster_4473	Pocillopora_meandrina_HIv1___Sc0000016	8251375	8252098	724	1062	311	0.9265536723163842	+	UCUUCGUUUUGUACAAAUUCCCACCGA	181	5	1019	3	6	8	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8274017-8274445	Cluster_4474	Pocillopora_meandrina_HIv1___Sc0000016	8274017	8274445	429	139	41	0.050359712230215826	-	AUCUAAACGAACUUGUUUUUCUUAUGAGCA	48	0	132	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8355046-8355474	Cluster_4475	Pocillopora_meandrina_HIv1___Sc0000016	8355046	8355474	429	211	54	0.05687203791469194	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	81	1	194	0	0	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8546527-8546951	Cluster_4476	Pocillopora_meandrina_HIv1___Sc0000016	8546527	8546951	425	148	69	0.9594594594594594	+	UAACACAAUGAACCAAGGCACGUCCAGA	19	1	134	0	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8551184-8552319	Cluster_4477	Pocillopora_meandrina_HIv1___Sc0000016	8551184	8552319	1136	2833	593	0.9216378397458524	+	UAACACAAUGAACCAAGGCACGUCCAGA	498	15	2697	2	10	45	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8602281-8602686	Cluster_4478	Pocillopora_meandrina_HIv1___Sc0000016	8602281	8602686	406	160	77	0.64375	.	UAUGACCGUUUGAAUCAGCCCAUGUACA	22	89	48	21	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8637809-8638451	Cluster_4479	Pocillopora_meandrina_HIv1___Sc0000016	8637809	8638451	643	1296	294	0.006944444444444444	-	UAGGCGUAAAUCUUGACUCCGAUCGACUAA	134	29	1244	3	1	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8955875-8956296	Cluster_4480	Pocillopora_meandrina_HIv1___Sc0000016	8955875	8956296	422	107	50	0.9906542056074766	+	CAUGUAGUUACUCAGGAAGAAGUC	27	9	46	2	11	2	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:9066859-9067275	Cluster_4481	Pocillopora_meandrina_HIv1___Sc0000016	9066859	9067275	417	104	8	0.0	-	GAGCUGUGACCCUCGGGC	51	104	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:52305-52730	Cluster_4482	Pocillopora_meandrina_HIv1___Sc0000017	52305	52730	426	111	39	0.9819819819819819	+	UCCGAUUUAAAAGAUUCUUUGUUUGU	33	0	106	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:210371-210799	Cluster_4483	Pocillopora_meandrina_HIv1___Sc0000017	210371	210799	429	467	133	0.9678800856531049	+	UGUAGAAUCAAUCUGUUACUAAGACACC	104	2	441	11	3	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:211581-211990	Cluster_4484	Pocillopora_meandrina_HIv1___Sc0000017	211581	211990	410	190	136	0.7684210526315789	.	UACUUCUAACAGCGUUUCUUUUAGCUCU	9	2	162	1	4	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:221306-221706	Cluster_4485	Pocillopora_meandrina_HIv1___Sc0000017	221306	221706	401	135	101	0.7703703703703704	.	UCUAAAGUUUACUUGUUGUUCUUCUCUG	7	22	88	10	3	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:390054-390665	Cluster_4486	Pocillopora_meandrina_HIv1___Sc0000017	390054	390665	612	599	141	0.5575959933222037	.	UCACUCGUAAAGAAUCGCUCGUAAAUUGAUC	169	12	543	9	6	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:396273-396699	Cluster_4487	Pocillopora_meandrina_HIv1___Sc0000017	396273	396699	427	176	62	0.16477272727272727	-	UGUCAAAUUCUCGUCUUCCUAACCUUU	70	0	171	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:399056-399466	Cluster_4488	Pocillopora_meandrina_HIv1___Sc0000017	399056	399466	411	111	39	0.3963963963963964	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	23	0	109	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:404683-405111	Cluster_4489	Pocillopora_meandrina_HIv1___Sc0000017	404683	405111	429	159	35	0.006289308176100629	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	67	1	158	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:406229-406708	Cluster_4490	Pocillopora_meandrina_HIv1___Sc0000017	406229	406708	480	1733	212	0.001154068090017311	-	UGGACAAAUUCAUAGGUCUGAUGCAAACAUG	359	30	1662	5	11	17	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:483166-484666	Cluster_4491	Pocillopora_meandrina_HIv1___Sc0000017	483166	484666	1501	2921	666	0.9486477233824033	+	UAGGAACACGAGAAGAUCUAGAAGAAACUCU	284	48	2717	7	38	61	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:484886-485541	Cluster_4492	Pocillopora_meandrina_HIv1___Sc0000017	484886	485541	656	597	309	0.576214405360134	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	23	8	520	3	9	21	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:485566-486341	Cluster_4493	Pocillopora_meandrina_HIv1___Sc0000017	485566	486341	776	2504	544	0.9141373801916933	+	UGGAUAUACGUACACAAUCUAGGCUAA	811	21	2412	12	5	15	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:566559-566986	Cluster_4494	Pocillopora_meandrina_HIv1___Sc0000017	566559	566986	428	83	9	0.03614457831325301	-	UCGGAUAUAAGGCGGUUAUCAAGCGCUUA	53	1	80	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:575298-575843	Cluster_4495	Pocillopora_meandrina_HIv1___Sc0000017	575298	575843	546	716	298	0.2988826815642458	.	UGAUUACAACUUCCGAGGCCGUCGUGUC	35	1	657	9	7	13	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:584232-584640	Cluster_4496	Pocillopora_meandrina_HIv1___Sc0000017	584232	584640	409	70	23	0.9571428571428572	+	UUGUGUAAUUGUUUUAUUCCGCCACGU	21	0	68	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:591378-591902	Cluster_4497	Pocillopora_meandrina_HIv1___Sc0000017	591378	591902	525	267	92	0.3970037453183521	.	UUUUACUGAGAUCUACUGUGUUCAGC	44	5	227	4	7	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:771548-771953	Cluster_4498	Pocillopora_meandrina_HIv1___Sc0000017	771548	771953	406	110	76	1.0	+	GACAGUUGUUCUGUGUGUGU	6	41	40	11	5	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:773597-774101	Cluster_4499	Pocillopora_meandrina_HIv1___Sc0000017	773597	774101	505	369	256	1.0	+	GCGGUGUCGUUGCUCAGACA	9	97	143	32	26	25	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:784268-784713	Cluster_4500	Pocillopora_meandrina_HIv1___Sc0000017	784268	784713	446	286	56	0.6083916083916084	.	UAAGAUCUGAUACAUUCUUUGGCGGUG	65	1	276	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:788138-788566	Cluster_4501	Pocillopora_meandrina_HIv1___Sc0000017	788138	788566	429	87	21	0.011494252873563218	-	UUGCAAUUGAAGACGAUCUCGGGCGCCCA	51	0	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:862336-862763	Cluster_4502	Pocillopora_meandrina_HIv1___Sc0000017	862336	862763	428	80	18	0.0	-	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	34	1	77	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1204139-1204545	Cluster_4503	Pocillopora_meandrina_HIv1___Sc0000017	1204139	1204545	407	106	66	0.0	-	GUGUUUCAGAAGAGACUGGACGGCU	5	20	63	7	3	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1303712-1304136	Cluster_4504	Pocillopora_meandrina_HIv1___Sc0000017	1303712	1304136	425	86	36	0.9883720930232558	+	UUCUUCUACCACUUCUUUUUCAAACAAUGU	22	1	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1312164-1312769	Cluster_4505	Pocillopora_meandrina_HIv1___Sc0000017	1312164	1312769	606	337	194	0.6320474777448071	.	UGAGAUCGUGGAAGGCCAAGUUCCUUGC	26	6	310	6	2	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1324592-1325023	Cluster_4506	Pocillopora_meandrina_HIv1___Sc0000017	1324592	1325023	432	184	68	0.010869565217391304	-	UUUGAUUGACGUACGGUAUUUGAGACGC	24	5	171	2	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1379429-1379855	Cluster_4507	Pocillopora_meandrina_HIv1___Sc0000017	1379429	1379855	427	109	31	0.7981651376146789	.	UACGUAACUUUCGGUUUUUCUUUCCGUA	31	2	106	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1550842-1551662	Cluster_4508	Pocillopora_meandrina_HIv1___Sc0000017	1550842	1551662	821	1218	131	0.6428571428571429	.	UCUUGUCAAUUCUGUCCAGGGUGAACCA	481	9	1198	1	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1603006-1603434	Cluster_4509	Pocillopora_meandrina_HIv1___Sc0000017	1603006	1603434	429	123	40	0.07317073170731707	-	CUGGUUCAAACAACGAUCGAGUGGUCAUU	41	1	114	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1612900-1613329	Cluster_4510	Pocillopora_meandrina_HIv1___Sc0000017	1612900	1613329	430	374	54	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	155	1	370	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1631655-1632082	Cluster_4511	Pocillopora_meandrina_HIv1___Sc0000017	1631655	1632082	428	246	41	0.9512195121951219	+	UAAAGUGUAUAAAAUGGGCUUCUCAGGA	179	0	246	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1636696-1637949	Cluster_4512	Pocillopora_meandrina_HIv1___Sc0000017	1636696	1637949	1254	1041	413	0.9990393852065321	+	UCUGCAACGGACUUCUAAGGGGUAAAGGC	66	6	1014	1	4	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1638965-1639903	Cluster_4513	Pocillopora_meandrina_HIv1___Sc0000017	1638965	1639903	939	597	224	0.9966499162479062	+	UAUCUUGAACUCUGUAAUGAUGGGUGAC	84	6	578	2	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1641559-1642075	Cluster_4514	Pocillopora_meandrina_HIv1___Sc0000017	1641559	1642075	517	7627	335	1.0	+	UGUGUCGAGCUUCUCUUGUAGCAGGAGU	2937	62	7465	4	67	20	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1661006-1661433	Cluster_4515	Pocillopora_meandrina_HIv1___Sc0000017	1661006	1661433	428	103	15	0.9805825242718447	+	UACCAAGGUCUUGUAGUCUAGUACAACU	59	0	102	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1662584-1663020	Cluster_4516	Pocillopora_meandrina_HIv1___Sc0000017	1662584	1663020	437	508	139	0.01968503937007874	-	UGCGAAAGAAACAGGGAAAGUUUGACGAUG	43	4	430	2	15	32	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1693895-1694326	Cluster_4517	Pocillopora_meandrina_HIv1___Sc0000017	1693895	1694326	432	307	91	0.755700325732899	.	UGUGGUGUAAAAUCGAUCUUUGUUCUU	37	0	299	2	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1789680-1790121	Cluster_4518	Pocillopora_meandrina_HIv1___Sc0000017	1789680	1790121	442	330	50	0.9696969696969697	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	150	3	324	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1793808-1794252	Cluster_4519	Pocillopora_meandrina_HIv1___Sc0000017	1793808	1794252	445	723	87	0.15214384508990317	-	GUGUAGAUCAGCCGACUUCAACAUGUUU	406	4	694	2	4	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1838139-1838633	Cluster_4520	Pocillopora_meandrina_HIv1___Sc0000017	1838139	1838633	495	370	123	1.0	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	56	0	368	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1900038-1900467	Cluster_4521	Pocillopora_meandrina_HIv1___Sc0000017	1900038	1900467	430	360	44	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	140	0	359	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1926176-1926677	Cluster_4522	Pocillopora_meandrina_HIv1___Sc0000017	1926176	1926677	502	723	133	0.5421853388658368	.	UAAAGUGUAUAAAAUGGGCUUCUCAGGA	128	8	688	3	20	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1933470-1933898	Cluster_4523	Pocillopora_meandrina_HIv1___Sc0000017	1933470	1933898	429	172	35	0.011627906976744186	-	UUCUAAGUGUCGCUGAUGUGGGGACUAUU	48	5	163	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2080328-2080757	Cluster_4524	Pocillopora_meandrina_HIv1___Sc0000017	2080328	2080757	430	317	52	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	126	0	317	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2089210-2089703	Cluster_4525	Pocillopora_meandrina_HIv1___Sc0000017	2089210	2089703	494	526	176	0.9885931558935361	+	UCCAAGGAUCUUAUCGACCUCAUCGUAGUA	103	0	508	2	0	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2113863-2114291	Cluster_4526	Pocillopora_meandrina_HIv1___Sc0000017	2113863	2114291	429	199	57	0.035175879396984924	-	UAAGAUAUCGUUAACAACUCGAAGAAGCG	32	0	193	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2186612-2187049	Cluster_4527	Pocillopora_meandrina_HIv1___Sc0000017	2186612	2187049	438	39279	464	2.545889661142086e-05	-	UGGAUGGACUGUGUUCCAGAAGAGACAGG	16268	144	38552	12	549	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2206514-2206944	Cluster_4528	Pocillopora_meandrina_HIv1___Sc0000017	2206514	2206944	431	2277	139	0.9991216512955643	+	AGGAUGGACAGUGUUCCAAAAG	1116	16	946	7	1300	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2220748-2221176	Cluster_4529	Pocillopora_meandrina_HIv1___Sc0000017	2220748	2221176	429	110	33	1.0	+	AGGAUGGACAGUGUUCCAAAAG	19	1	80	0	26	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2455876-2456293	Cluster_4530	Pocillopora_meandrina_HIv1___Sc0000017	2455876	2456293	418	208	7	1.0	+	UGGCCUGAAAAAAAAAAA	193	207	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2473930-2474359	Cluster_4531	Pocillopora_meandrina_HIv1___Sc0000017	2473930	2474359	430	235	40	0.00851063829787234	-	ACAGUCAGUCUAUUAUGCAACGCACCCAAU	120	3	226	2	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2489758-2490243	Cluster_4532	Pocillopora_meandrina_HIv1___Sc0000017	2489758	2490243	486	288	118	0.0	-	UCUGACCAGUAAUAUUAAGUUUGUAUGAUC	26	1	284	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2493773-2494182	Cluster_4533	Pocillopora_meandrina_HIv1___Sc0000017	2493773	2494182	410	139	85	0.3237410071942446	.	UGUAUUCUUCUCUUAGUCUCCGUAGCU	10	6	107	1	1	19	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2494345-2495070	Cluster_4534	Pocillopora_meandrina_HIv1___Sc0000017	2494345	2495070	726	2089	281	0.21014839636189564	.	UAUAUGACGAUUUGUACAAAAUGAUGGAC	463	16	1877	34	37	42	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2498020-2498449	Cluster_4535	Pocillopora_meandrina_HIv1___Sc0000017	2498020	2498449	430	164	57	0.0	-	UGUAUAUGGUGGAUUGCCAAUGACGGGCGUU	45	1	160	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2543956-2544377	Cluster_4536	Pocillopora_meandrina_HIv1___Sc0000017	2543956	2544377	422	114	90	0.03508771929824561	-	GCGCUGGACUCUGGGUCGGACGGCCCGU	3	37	53	5	5	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2694841-2695270	Cluster_4537	Pocillopora_meandrina_HIv1___Sc0000017	2694841	2695270	430	171	25	0.0	-	UAAUGUGUGACUUUUUCGCUUUUGUUUUGA	78	0	171	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2737275-2737704	Cluster_4538	Pocillopora_meandrina_HIv1___Sc0000017	2737275	2737704	430	172	26	0.011627906976744186	-	UUCACUCCAGAAUGUUUGGCCUCUUUAGCC	124	1	171	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2780735-2781180	Cluster_4539	Pocillopora_meandrina_HIv1___Sc0000017	2780735	2781180	446	1659	224	0.16636528028933092	-	UCCUUCACUCCAGAAUGUUUGGCCUCUU	169	13	1503	7	9	65	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2985643-2986055	Cluster_4540	Pocillopora_meandrina_HIv1___Sc0000017	2985643	2986055	413	82	52	0.9878048780487805	+	AUCGAUCCAGCAAAGUGUAGGCA	8	13	26	4	11	19	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2989912-2990352	Cluster_4541	Pocillopora_meandrina_HIv1___Sc0000017	2989912	2990352	441	418	280	1.0	+	CCAGGCUGGCUGAGUGACG	10	167	118	42	38	28	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2993139-2993881	Cluster_4542	Pocillopora_meandrina_HIv1___Sc0000017	2993139	2993881	743	381	282	1.0	+	AACUACCAAGUUCUGAGCGAAAAUGAU	7	123	115	47	32	30	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2995620-2996047	Cluster_4543	Pocillopora_meandrina_HIv1___Sc0000017	2995620	2996047	428	437	274	1.0	+	ACGAAUCGUUGUGGCACAGAUGCUCCA	23	130	185	35	28	26	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3046579-3046987	Cluster_4544	Pocillopora_meandrina_HIv1___Sc0000017	3046579	3046987	409	95	74	0.0	-	GUACUAGACUGUAAGCCA	4	25	45	1	6	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3160389-3160827	Cluster_4545	Pocillopora_meandrina_HIv1___Sc0000017	3160389	3160827	439	283	141	0.7667844522968198	.	UCUAACGGAUACAGCUGCUGUACUGCU	21	25	237	2	2	1	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3161421-3161847	Cluster_4546	Pocillopora_meandrina_HIv1___Sc0000017	3161421	3161847	427	216	106	0.7685185185185185	.	UCACGAAUCUUUGCCAUUGUGAGGCUCACU	18	7	195	0	1	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3163210-3164065	Cluster_4547	Pocillopora_meandrina_HIv1___Sc0000017	3163210	3164065	856	1324	253	0.09441087613293052	-	CGUGUACGACGCCUCUGCCCGAGCUUCAG	334	8	1278	16	4	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3164686-3165402	Cluster_4548	Pocillopora_meandrina_HIv1___Sc0000017	3164686	3165402	717	553	232	0.6166365280289331	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	61	5	532	1	1	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3210425-3210843	Cluster_4549	Pocillopora_meandrina_HIv1___Sc0000017	3210425	3210843	419	96	11	1.0	+	GUGUGUGUCUUUUUUCUCU	62	92	1	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3343078-3344855	Cluster_4550	Pocillopora_meandrina_HIv1___Sc0000017	3343078	3344855	1778	2790	1087	0.956989247311828	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	99	18	2652	9	29	45	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3563626-3564054	Cluster_4551	Pocillopora_meandrina_HIv1___Sc0000017	3563626	3564054	429	360	93	0.005555555555555556	-	AAGGAAAUUAAUGAUUGUAUAUGUGAGG	48	5	338	1	0	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3564620-3565836	Cluster_4552	Pocillopora_meandrina_HIv1___Sc0000017	3564620	3565836	1217	2133	319	0.001875293014533521	-	UGACAAUCAAACCAUGGACAAACUAAUUUGU	192	16	1966	6	64	19	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3581223-3581652	Cluster_4553	Pocillopora_meandrina_HIv1___Sc0000017	3581223	3581652	430	1857	91	0.0005385029617662897	-	AGUAGAUGCAGUUAGGAAUAAAAUUUUGGA	880	5	1830	4	12	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3581866-3582294	Cluster_4554	Pocillopora_meandrina_HIv1___Sc0000017	3581866	3582294	429	217	42	0.06912442396313365	-	AAGAGAAUCAAGAGCCUGUGCUCCGCGGC	86	7	202	1	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3621125-3621525	Cluster_4555	Pocillopora_meandrina_HIv1___Sc0000017	3621125	3621525	401	90	44	0.0	-	GAGUACAUGGACUAUCGAUUCUUCAAGGAU	17	11	70	0	1	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3700714-3701141	Cluster_4556	Pocillopora_meandrina_HIv1___Sc0000017	3700714	3701141	428	105	30	0.05714285714285714	-	UUUUCAGUAAUUAUGCCAAGCACUCAUCGUC	33	0	100	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3979364-3979927	Cluster_4557	Pocillopora_meandrina_HIv1___Sc0000017	3979364	3979927	564	618	319	0.4255663430420712	.	UUUAUCUGGAUGUACAUUGG	28	352	18	171	49	21	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3981302-3981865	Cluster_4558	Pocillopora_meandrina_HIv1___Sc0000017	3981302	3981865	564	727	315	0.38514442916093533	.	UCUUCCACUCGGCCAUCGUAG	37	413	6	226	57	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4136569-4136996	Cluster_4559	Pocillopora_meandrina_HIv1___Sc0000017	4136569	4136996	428	93	16	0.021505376344086023	-	AACUACUGCUCGUGCUCUAGAUAUGACA	34	0	91	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4143141-4143569	Cluster_4560	Pocillopora_meandrina_HIv1___Sc0000017	4143141	4143569	429	296	44	0.9797297297297297	+	AUUGUCUUUAUGGAUCUACUAGGCCAAA	112	0	296	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4180510-4181079	Cluster_4561	Pocillopora_meandrina_HIv1___Sc0000017	4180510	4181079	570	390	187	0.05384615384615385	-	UGCAGUAUUCCAAGGAACUUCUUUGA	45	19	361	2	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4181357-4182493	Cluster_4562	Pocillopora_meandrina_HIv1___Sc0000017	4181357	4182493	1137	1090	491	0.18256880733944955	-	UAUGACGUUCCAGAAUCUUUGACAAAA	31	33	966	7	8	35	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4183015-4183444	Cluster_4563	Pocillopora_meandrina_HIv1___Sc0000017	4183015	4183444	430	146	53	0.0136986301369863	-	AAACGAUUGAAUAGCAUAACUGAUG	22	2	141	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4220685-4221102	Cluster_4564	Pocillopora_meandrina_HIv1___Sc0000017	4220685	4221102	418	82	11	1.0	+	CGGCUUGAAAAAAAAAAA	17	46	2	12	11	11	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4261931-4262359	Cluster_4565	Pocillopora_meandrina_HIv1___Sc0000017	4261931	4262359	429	162	29	1.0	+	GGUGCCUUUGAUGUCUACUGUGACCAGACA	53	0	161	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4272965-4274235	Cluster_4566	Pocillopora_meandrina_HIv1___Sc0000017	4272965	4274235	1271	3144	878	0.8842239185750637	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	344	24	2942	17	11	34	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4274424-4277297	Cluster_4567	Pocillopora_meandrina_HIv1___Sc0000017	4274424	4277297	2874	6599	2221	0.7893620245491741	.	UGAACUCGUGCAACAUCUUGAAGGACA	315	65	5884	67	57	212	314	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4311274-4311701	Cluster_4568	Pocillopora_meandrina_HIv1___Sc0000017	4311274	4311701	428	197	82	0.9390862944162437	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	88	1	189	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4313732-4314141	Cluster_4569	Pocillopora_meandrina_HIv1___Sc0000017	4313732	4314141	410	326	189	0.7607361963190185	.	UGUUCUUUCUCUGCUGUAAUAUAUGGC	19	2	264	4	2	13	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4314952-4315376	Cluster_4570	Pocillopora_meandrina_HIv1___Sc0000017	4314952	4315376	425	227	95	0.7709251101321586	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	27	8	195	3	4	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4365732-4366160	Cluster_4571	Pocillopora_meandrina_HIv1___Sc0000017	4365732	4366160	429	189	60	1.0	+	GGGGUGGGCAGUUUUUCAAAAGAGAAUGGA	31	14	131	14	12	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4401446-4402222	Cluster_4572	Pocillopora_meandrina_HIv1___Sc0000017	4401446	4402222	777	562	126	0.3807829181494662	.	CCUUUCUACAUCUCUGGCUGCAG	82	11	268	51	4	87	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4404038-4404654	Cluster_4573	Pocillopora_meandrina_HIv1___Sc0000017	4404038	4404654	617	978	282	0.934560327198364	+	UUCGAGCUAUCACUGAAAGAGGGAGUGGU	97	14	934	2	6	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4453809-4454229	Cluster_4574	Pocillopora_meandrina_HIv1___Sc0000017	4453809	4454229	421	78	19	0.01282051282051282	-	AAACGACUUAUUCAUGACAUUUA	35	4	4	13	10	45	2	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4459675-4460103	Cluster_4575	Pocillopora_meandrina_HIv1___Sc0000017	4459675	4460103	429	118	37	0.0	-	UGACUCAUCUUUUCUUAUUAUUUCUGGCU	24	0	98	5	2	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4482228-4482640	Cluster_4576	Pocillopora_meandrina_HIv1___Sc0000017	4482228	4482640	413	98	49	0.7551020408163265	.	UUCGCUGUUAGCUUUGUUCUCUGU	15	3	58	3	2	5	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4517327-4517754	Cluster_4577	Pocillopora_meandrina_HIv1___Sc0000017	4517327	4517754	428	213	65	0.004694835680751174	-	UGGACGGUGUUUCAGAGGAGACUGGAUG	34	4	168	1	3	6	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4573969-4574396	Cluster_4578	Pocillopora_meandrina_HIv1___Sc0000017	4573969	4574396	428	130	39	0.015384615384615385	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	22	1	120	2	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4618885-4619312	Cluster_4579	Pocillopora_meandrina_HIv1___Sc0000017	4618885	4619312	428	142	43	0.0	-	AUGUUUACCAGAGUCGAAAUGAAUCGCCA	22	1	137	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4623169-4623669	Cluster_4580	Pocillopora_meandrina_HIv1___Sc0000017	4623169	4623669	501	502	123	0.6374501992031872	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	168	32	415	26	13	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4693308-4693727	Cluster_4581	Pocillopora_meandrina_HIv1___Sc0000017	4693308	4693727	420	197	94	0.6954314720812182	.	UCGAUUCCACCGAAAGAAAUAACCUGUA	27	26	132	9	8	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4702871-4703296	Cluster_4582	Pocillopora_meandrina_HIv1___Sc0000017	4702871	4703296	426	108	30	0.027777777777777776	-	CCGGCUAAAAAAAAAAAAAAAAAAAAA	16	2	89	2	1	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4707666-4708094	Cluster_4583	Pocillopora_meandrina_HIv1___Sc0000017	4707666	4708094	429	198	75	1.0	+	GUGUUUCAAAAAAGACAGGAUGGCUCGGU	33	6	187	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4742250-4742677	Cluster_4584	Pocillopora_meandrina_HIv1___Sc0000017	4742250	4742677	428	159	59	0.9937106918238994	+	GGGGUGGACGGUGUUCCAAAAGAGACUG	26	4	140	2	7	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4763452-4763881	Cluster_4585	Pocillopora_meandrina_HIv1___Sc0000017	4763452	4763881	430	230	61	0.9652173913043478	+	GGGGUGGACGGUGUUCCAAAAGAGACUG	41	5	208	2	9	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4787179-4787608	Cluster_4586	Pocillopora_meandrina_HIv1___Sc0000017	4787179	4787608	430	94	10	0.9787234042553191	+	CACAAGACAAGACUCAGUAUUCGCAAGUUG	75	7	84	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4866060-4866489	Cluster_4587	Pocillopora_meandrina_HIv1___Sc0000017	4866060	4866489	430	371	25	0.008086253369272238	-	AAGAUGUCGAGCGUUAGUUUCCAAACGGG	157	3	364	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4883414-4883842	Cluster_4588	Pocillopora_meandrina_HIv1___Sc0000017	4883414	4883842	429	374	105	0.00267379679144385	-	GCGUCGGUGGUAUAGUGGUGAGCAUAGCU	75	25	308	9	17	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4969810-4970227	Cluster_4589	Pocillopora_meandrina_HIv1___Sc0000017	4969810	4970227	418	71	14	0.0	-	CGGCCUGAAAAAAAAAGA	14	34	36	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5041786-5042306	Cluster_4590	Pocillopora_meandrina_HIv1___Sc0000017	5041786	5042306	521	2565	383	0.0	-	UUGCACUGUGAAAAUCUGACA	1176	147	693	1388	58	119	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5050908-5051000	Cluster_4591	Pocillopora_meandrina_HIv1___Sc0000017	5050908	5051000	93	132750	610	0.0	-	AACUGCUGAGAUUCUAUGGAUUU	47680	4764	285	1096	22198	101160	3247	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000017:5144143-5144576	Cluster_4592	Pocillopora_meandrina_HIv1___Sc0000017	5144143	5144576	434	2311	146	1.0	+	UGGCUGGACAGUAUUUCAGAAGAGACUUG	1275	9	2293	1	5	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5636506-5636931	Cluster_4593	Pocillopora_meandrina_HIv1___Sc0000017	5636506	5636931	426	385	261	0.7896103896103897	.	UCCGAUUUUCUCAACCGCCUCUUGUC	8	11	311	3	5	21	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5637069-5637746	Cluster_4594	Pocillopora_meandrina_HIv1___Sc0000017	5637069	5637746	678	8298	556	0.9967462039045553	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2230	12	8141	8	63	36	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5824989-5825524	Cluster_4595	Pocillopora_meandrina_HIv1___Sc0000017	5824989	5825524	536	1917	386	0.0	-	UUGGUCUUCUGGCUUCAACAUUA	469	158	645	135	192	604	183	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5874595-5875018	Cluster_4596	Pocillopora_meandrina_HIv1___Sc0000017	5874595	5875018	424	91	33	0.3626373626373626	.	CCAAUACCGAAACAACAUAGAUGAACUAAC	19	2	85	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5875339-5875800	Cluster_4597	Pocillopora_meandrina_HIv1___Sc0000017	5875339	5875800	462	419	84	0.9212410501193318	+	UGUUGUGCUUUUUGUUUGUCUUUGAAAA	161	1	402	2	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5875966-5876475	Cluster_4598	Pocillopora_meandrina_HIv1___Sc0000017	5875966	5876475	510	468	90	0.967948717948718	+	AACUACUGCUCGUACUCUAGAUAUGAC	76	18	434	2	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6108369-6108792	Cluster_4599	Pocillopora_meandrina_HIv1___Sc0000017	6108369	6108792	424	544	106	0.9816176470588235	+	AUCUCGGUGGGACCUCCG	216	425	9	22	36	41	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6109021-6109449	Cluster_4600	Pocillopora_meandrina_HIv1___Sc0000017	6109021	6109449	429	237	98	0.004219409282700422	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	46	52	111	10	12	22	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6109524-6110002	Cluster_4601	Pocillopora_meandrina_HIv1___Sc0000017	6109524	6110002	479	775	310	0.03354838709677419	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	86	239	359	68	54	33	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6534177-6534577	Cluster_4602	Pocillopora_meandrina_HIv1___Sc0000017	6534177	6534577	401	188	137	0.015957446808510637	-	AAACUGAUUCCUUAAACUGC	9	25	106	12	14	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6694333-6694803	Cluster_4603	Pocillopora_meandrina_HIv1___Sc0000017	6694333	6694803	471	2086	248	0.0	-	GAUAUAAUUCUGCAAUGAUGAGGACA	390	296	1308	123	130	87	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6939467-6939875	Cluster_4604	Pocillopora_meandrina_HIv1___Sc0000017	6939467	6939875	409	255	148	0.6588235294117647	.	UCUUGUUGUGAGCGUGGAACA	27	78	25	106	20	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7031276-7033410	Cluster_4605	Pocillopora_meandrina_HIv1___Sc0000017	7031276	7033410	2135	6311	1257	0.03707811757249247	-	UGUAAUACAAAGUCAUGUGCCACCUCUGC	316	48	6071	12	18	64	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7034028-7034455	Cluster_4606	Pocillopora_meandrina_HIv1___Sc0000017	7034028	7034455	428	235	58	0.13617021276595745	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	97	0	202	1	1	0	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7034719-7035146	Cluster_4607	Pocillopora_meandrina_HIv1___Sc0000017	7034719	7035146	428	119	48	0.04201680672268908	-	UACAAGACGUACUGGAGAGCAUUGAACAAAU	19	2	115	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7036864-7037298	Cluster_4608	Pocillopora_meandrina_HIv1___Sc0000017	7036864	7037298	435	360	137	0.36944444444444446	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	75	5	312	4	3	19	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7102000-7102417	Cluster_4609	Pocillopora_meandrina_HIv1___Sc0000017	7102000	7102417	418	95	13	0.9368421052631579	+	CCUUUGUUCUAAGAUUUGC	33	79	6	8	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7103692-7104222	Cluster_4610	Pocillopora_meandrina_HIv1___Sc0000017	7103692	7104222	531	955	327	0.0	-	CAUCUCCACUCUAGCCCAUCUGU	72	172	278	182	72	167	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7115531-7115956	Cluster_4611	Pocillopora_meandrina_HIv1___Sc0000017	7115531	7115956	426	296	211	0.0	-	CAGACUGGGAGCUACUUGCUUUA	6	76	123	22	21	31	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7213310-7213741	Cluster_4612	Pocillopora_meandrina_HIv1___Sc0000017	7213310	7213741	432	1853	171	0.002698327037236913	-	UGAAAGGACAUUUACAUUUGAGGAUGG	280	35	1725	60	9	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7235293-7235729	Cluster_4613	Pocillopora_meandrina_HIv1___Sc0000017	7235293	7235729	437	317	72	0.580441640378549	.	UCAAAUAAGGUUGCAUGAGCCUCAUGACC	127	7	288	2	2	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7254938-7255365	Cluster_4614	Pocillopora_meandrina_HIv1___Sc0000017	7254938	7255365	428	198	52	0.06060606060606061	-	GUGUGACUCAAGUAAUGGUUAUUGUUGU	56	4	183	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7255604-7257695	Cluster_4615	Pocillopora_meandrina_HIv1___Sc0000017	7255604	7257695	2092	6388	1434	0.937226048841578	+	UUAAAUGAAGUUUCCAAUGUUUGACUGUC	952	44	5988	26	40	149	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7257721-7258847	Cluster_4616	Pocillopora_meandrina_HIv1___Sc0000017	7257721	7258847	1127	1971	593	0.9502790461694571	+	UGUGACAACUACUUGUGCCCGCCAAGGGGA	129	38	1865	16	7	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7299625-7300053	Cluster_4617	Pocillopora_meandrina_HIv1___Sc0000017	7299625	7300053	429	192	62	0.0	-	UUUGAUUGACGUACGGUAUUUGAGACGC	28	2	188	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7302129-7302556	Cluster_4618	Pocillopora_meandrina_HIv1___Sc0000017	7302129	7302556	428	200	46	0.01	-	UCGUAGAACAUCGCAUUACGAGGACCGA	104	2	195	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7303251-7303777	Cluster_4619	Pocillopora_meandrina_HIv1___Sc0000017	7303251	7303777	527	7017	307	0.9733504346586861	+	UCUGUUUCCAUAUUUGAACGCUGACGAC	3304	35	6754	17	11	24	176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7321863-7322292	Cluster_4620	Pocillopora_meandrina_HIv1___Sc0000017	7321863	7322292	430	441	74	0.9909297052154195	+	UGAAAGGACAUUUACAUUUGAGGAUGGAG	74	6	422	6	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7327576-7328005	Cluster_4621	Pocillopora_meandrina_HIv1___Sc0000017	7327576	7328005	430	105	29	0.0	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	45	1	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7343995-7344418	Cluster_4622	Pocillopora_meandrina_HIv1___Sc0000017	7343995	7344418	424	114	35	1.0	+	UCUGUUUCCAUGUUUGAACGCUGACGAC	41	0	112	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7348006-7348429	Cluster_4623	Pocillopora_meandrina_HIv1___Sc0000017	7348006	7348429	424	114	30	0.0	-	UCUGUUUCCAUGUUUGAACGCUGACGAC	36	0	112	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7409563-7410038	Cluster_4624	Pocillopora_meandrina_HIv1___Sc0000017	7409563	7410038	476	299	110	0.9966555183946488	+	CCGACAUGCCUGACUAUUUCAAACAAGC	38	13	265	11	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7410725-7411234	Cluster_4625	Pocillopora_meandrina_HIv1___Sc0000017	7410725	7411234	510	565	141	0.9823008849557522	+	CUGUGGCUCAUGUUAACCCUUUGUAACUG	64	2	550	2	4	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7416579-7417006	Cluster_4626	Pocillopora_meandrina_HIv1___Sc0000017	7416579	7417006	428	1668	47	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAA	1424	0	1624	0	1	0	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7448130-7448836	Cluster_4627	Pocillopora_meandrina_HIv1___Sc0000017	7448130	7448836	707	342	132	0.16666666666666666	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	70	0	313	1	2	6	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7508338-7508763	Cluster_4628	Pocillopora_meandrina_HIv1___Sc0000017	7508338	7508763	426	172	64	0.9941860465116279	+	CCGACAUGCAUGACUAUUUCAAACAAGC	17	4	158	1	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7557760-7558187	Cluster_4629	Pocillopora_meandrina_HIv1___Sc0000017	7557760	7558187	428	281	48	1.0	+	UCGUAGAACAUCGCAUUACGAGGACCGA	140	2	276	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7590477-7590904	Cluster_4630	Pocillopora_meandrina_HIv1___Sc0000017	7590477	7590904	428	80	24	0.0	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	34	0	80	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7605253-7605798	Cluster_4631	Pocillopora_meandrina_HIv1___Sc0000017	7605253	7605798	546	271	99	0.9704797047970479	+	UGUACUGAUCUUUGUCUUCUGCAGCCAGA	40	1	265	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7607254-7607681	Cluster_4632	Pocillopora_meandrina_HIv1___Sc0000017	7607254	7607681	428	185	37	0.9945945945945946	+	UGGUAAACUUCCCUAACAUUGGCCUGUG	41	0	183	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7607940-7608367	Cluster_4633	Pocillopora_meandrina_HIv1___Sc0000017	7607940	7608367	428	99	22	1.0	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	31	0	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7611048-7611606	Cluster_4634	Pocillopora_meandrina_HIv1___Sc0000017	7611048	7611606	559	449	93	0.43429844097995546	.	AUAGCUCGAACGAGGACUCGUCCUUAACA	95	3	389	3	4	8	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7629197-7629671	Cluster_4635	Pocillopora_meandrina_HIv1___Sc0000017	7629197	7629671	475	310	98	0.3774193548387097	.	UCUGUUUCCAUAUUUGAACACUGUCGAC	101	9	274	4	6	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7631065-7632147	Cluster_4636	Pocillopora_meandrina_HIv1___Sc0000017	7631065	7632147	1083	7504	240	0.00013326226012793177	-	UUUCCAUAUUUGAACGCUGACGACAGUAGG	5056	3	7498	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7632391-7632822	Cluster_4637	Pocillopora_meandrina_HIv1___Sc0000017	7632391	7632822	432	356	74	0.0	-	UGUUGAUUCUUUUCCAUUUAAUACAAU	46	1	349	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7635624-7636052	Cluster_4638	Pocillopora_meandrina_HIv1___Sc0000017	7635624	7636052	429	121	31	0.0	-	UCGGAUCUGAAAAAAACUGCGUUUGUUUUC	25	0	120	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7636103-7636532	Cluster_4639	Pocillopora_meandrina_HIv1___Sc0000017	7636103	7636532	430	157	63	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	31	0	155	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7636880-7637309	Cluster_4640	Pocillopora_meandrina_HIv1___Sc0000017	7636880	7637309	430	163	63	0.0	-	UGUACGCGUAUCUCUUGUUUAUCGAGCUUU	52	3	160	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7639204-7639914	Cluster_4641	Pocillopora_meandrina_HIv1___Sc0000017	7639204	7639914	711	438	126	0.0	-	UGUCAAAUCUUCAAUUGGUCUCUGUGCCGGA	79	1	424	10	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7640766-7641262	Cluster_4642	Pocillopora_meandrina_HIv1___Sc0000017	7640766	7641262	497	517	187	0.0	-	UGGGCAUCCAUCUAUAAAAGUGGGAAAGUU	65	2	502	6	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7707358-7707848	Cluster_4643	Pocillopora_meandrina_HIv1___Sc0000017	7707358	7707848	491	319	97	0.9905956112852664	+	UGACCCAAUAAGUGGACUUCCGUAUUCCUC	35	4	279	1	1	27	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7726751-7727160	Cluster_4644	Pocillopora_meandrina_HIv1___Sc0000017	7726751	7727160	410	160	61	0.0	-	CCGACAUGCAUGACUAUUUCAAACAAGC	18	1	145	4	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7809959-7810432	Cluster_4645	Pocillopora_meandrina_HIv1___Sc0000017	7809959	7810432	474	282	113	1.0	+	CCGACAUGCCUGACUAUUUCAAACAAGC	47	14	247	8	4	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7811089-7811591	Cluster_4646	Pocillopora_meandrina_HIv1___Sc0000017	7811089	7811591	503	1726	221	0.9617612977983777	+	UCGUAGAACAUCGCAUUACGAGGACCGA	811	6	1679	4	4	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7824092-7824816	Cluster_4647	Pocillopora_meandrina_HIv1___Sc0000017	7824092	7824816	725	5903	274	0.0	-	UUUCCAUAUUUGAACGCUGACGACAGUACGU	1450	1	5851	0	2	2	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7827787-7828215	Cluster_4648	Pocillopora_meandrina_HIv1___Sc0000017	7827787	7828215	429	94	30	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	38	0	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7839161-7839583	Cluster_4649	Pocillopora_meandrina_HIv1___Sc0000017	7839161	7839583	423	105	51	0.8	+	UGAAAGGACAUUUACAUUUGAGGAUGGAG	15	4	93	2	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7872587-7874191	Cluster_4650	Pocillopora_meandrina_HIv1___Sc0000017	7872587	7874191	1605	10520	839	0.0007604562737642585	-	UUUCCAUAUUUGAACGCUGACGACAGUAGG	5153	44	10383	11	8	55	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7876569-7876996	Cluster_4651	Pocillopora_meandrina_HIv1___Sc0000017	7876569	7876996	428	212	96	0.0	-	UAGUGUAUACCUGAAGAUCUAUUUUUAGC	16	3	205	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7877574-7878003	Cluster_4652	Pocillopora_meandrina_HIv1___Sc0000017	7877574	7878003	430	152	73	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	41	0	147	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7880962-7881390	Cluster_4653	Pocillopora_meandrina_HIv1___Sc0000017	7880962	7881390	429	173	47	0.005780346820809248	-	UAAAUCUUGCAUUGGAACCACUUGGCGCG	39	1	171	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7885544-7885972	Cluster_4654	Pocillopora_meandrina_HIv1___Sc0000017	7885544	7885972	429	232	121	0.004310344827586207	-	UGUGUCUUCGUCGGUAUUACGUAUUGA	14	3	225	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7910611-7911035	Cluster_4655	Pocillopora_meandrina_HIv1___Sc0000017	7910611	7911035	425	224	102	0.48660714285714285	.	CUGUGGCUCAUGUUAACCCUUUGUAACC	34	4	211	3	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7957991-7958415	Cluster_4656	Pocillopora_meandrina_HIv1___Sc0000017	7957991	7958415	425	169	56	0.9940828402366864	+	CCGACAUGCAUGACUAUUUCAAACAAGC	19	5	161	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7971859-7972287	Cluster_4657	Pocillopora_meandrina_HIv1___Sc0000017	7971859	7972287	429	255	40	0.01568627450980392	-	UACGACGUGGUUCGGAGGCAGUGUGACCA	41	1	247	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7997759-7998190	Cluster_4658	Pocillopora_meandrina_HIv1___Sc0000017	7997759	7998190	432	428	59	1.0	+	UCUGUUUCUAUAUUUGAACGCUGACGACA	101	0	426	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8014780-8015205	Cluster_4659	Pocillopora_meandrina_HIv1___Sc0000017	8014780	8015205	426	174	56	0.0	-	CCGACAUGCAUGACUAUUUCAAACAAGC	22	3	162	2	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8043563-8043996	Cluster_4660	Pocillopora_meandrina_HIv1___Sc0000017	8043563	8043996	434	672	58	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	253	1	656	0	0	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8073302-8076351	Cluster_4661	Pocillopora_meandrina_HIv1___Sc0000017	8073302	8076351	3050	74797	4341	0.04091073171383879	-	UGAUCAUGGAUUCUAAACUGGUAAUGGCC	24036	374	71201	295	254	1054	1619	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8086133-8086560	Cluster_4662	Pocillopora_meandrina_HIv1___Sc0000017	8086133	8086560	428	166	25	1.0	+	UCUGUUUCCAUAUUUGGACGCUGACGAC	92	0	163	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8099388-8100423	Cluster_4663	Pocillopora_meandrina_HIv1___Sc0000017	8099388	8100423	1036	2448	571	0.15931372549019607	-	UCGAUCAAUUGGCUUAUAUGAUUCUU	198	36	2040	17	14	131	210	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8106103-8106537	Cluster_4664	Pocillopora_meandrina_HIv1___Sc0000017	8106103	8106537	435	188	86	1.0	+	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	28	0	185	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8115360-8116284	Cluster_4665	Pocillopora_meandrina_HIv1___Sc0000017	8115360	8116284	925	13674	494	1.0	+	UUUCCAUAUUUGAACGCUGACGACAGUAC	2746	6	13476	2	7	18	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8161609-8162038	Cluster_4666	Pocillopora_meandrina_HIv1___Sc0000017	8161609	8162038	430	226	86	0.9734513274336283	+	UGACCCAAUAAGUGGACUUCCGUAUUCC	33	6	199	1	0	18	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8171931-8172377	Cluster_4667	Pocillopora_meandrina_HIv1___Sc0000017	8171931	8172377	447	55807	574	0.9999283244037487	+	UUUCCAUAUUUGAACGCUGACGACAGUACA	15437	13	54946	7	15	29	797	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8180903-8181326	Cluster_4668	Pocillopora_meandrina_HIv1___Sc0000017	8180903	8181326	424	158	63	0.0	-	UUUGAAAGGACAUUUACAUUUGAGGAUGGA	15	10	138	1	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8209815-8210249	Cluster_4669	Pocillopora_meandrina_HIv1___Sc0000017	8209815	8210249	435	10798	300	0.0037969994443415446	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	4292	8	10510	4	7	13	256	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8261341-8261768	Cluster_4670	Pocillopora_meandrina_HIv1___Sc0000017	8261341	8261768	428	151	23	0.013245033112582781	-	UCUGUUUCCAUAUUUGAACACUGUCGAC	98	2	143	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8261986-8262485	Cluster_4671	Pocillopora_meandrina_HIv1___Sc0000017	8261986	8262485	500	352	75	0.07670454545454546	-	UGUUGGAGACGGUCAUUUUCUGAAAGGA	92	4	336	0	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8265837-8266260	Cluster_4672	Pocillopora_meandrina_HIv1___Sc0000017	8265837	8266260	424	125	46	0.608	.	UUUCCAUACUUGAACGCUGACGACAGUAGG	30	0	116	2	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8280142-8280571	Cluster_4673	Pocillopora_meandrina_HIv1___Sc0000017	8280142	8280571	430	579	140	0.24870466321243523	.	AUUGAUUCUAUUUUGUACGGCCUAGU	189	5	556	1	2	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8284831-8285257	Cluster_4674	Pocillopora_meandrina_HIv1___Sc0000017	8284831	8285257	427	100	35	0.99	+	UGAAAGGACAUUUACAUUUGAGGAUGGAG	17	0	97	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8285928-8286355	Cluster_4675	Pocillopora_meandrina_HIv1___Sc0000017	8285928	8286355	428	116	27	0.9827586206896551	+	UCGUAGAACAUCGCAUUACGAGGACCGA	71	0	113	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8345457-8345881	Cluster_4676	Pocillopora_meandrina_HIv1___Sc0000017	8345457	8345881	425	173	67	0.9942196531791907	+	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	25	4	155	2	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8355848-8356270	Cluster_4677	Pocillopora_meandrina_HIv1___Sc0000017	8355848	8356270	423	272	141	0.9816176470588235	+	UGUAACAGCUCUUGUGUCUUCAGGCCUCGA	23	2	261	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8356873-8357301	Cluster_4678	Pocillopora_meandrina_HIv1___Sc0000017	8356873	8357301	429	1435	125	0.9909407665505227	+	UCUUUCGGUUCUUUGGUGAGGUCGCCAUC	691	11	1419	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8359861-8360291	Cluster_4679	Pocillopora_meandrina_HIv1___Sc0000017	8359861	8360291	431	224	116	0.9330357142857143	+	UCCCGAUCGCGAAUAUCGAACCGUCGAUAUG	28	0	202	0	3	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8360425-8360841	Cluster_4680	Pocillopora_meandrina_HIv1___Sc0000017	8360425	8360841	417	156	87	0.8525641025641025	+	UGCGUGUUUUCUAAGUGUCGCUGAUGUG	12	4	136	1	5	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8361688-8362276	Cluster_4681	Pocillopora_meandrina_HIv1___Sc0000017	8361688	8362276	589	53578	1103	0.00011198626301840307	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	22260	68	53120	16	33	182	159	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8411027-8411454	Cluster_4682	Pocillopora_meandrina_HIv1___Sc0000017	8411027	8411454	428	228	41	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	100	2	226	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8418420-8418858	Cluster_4683	Pocillopora_meandrina_HIv1___Sc0000017	8418420	8418858	439	207	77	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	37	0	204	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8424318-8425401	Cluster_4684	Pocillopora_meandrina_HIv1___Sc0000017	8424318	8425401	1084	3113	506	0.9502088017989078	+	UCGAUCAAUUGGCUUAUAUGAUUCUU	446	11	2955	6	3	35	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8437082-8437511	Cluster_4685	Pocillopora_meandrina_HIv1___Sc0000017	8437082	8437511	430	1298	152	0.053929121725731895	-	UGUGAUUGCAUGGCUGGUCUUGGAGAGAGC	367	28	1050	40	20	74	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8439842-8440269	Cluster_4686	Pocillopora_meandrina_HIv1___Sc0000017	8439842	8440269	428	171	23	0.0	-	UCUGUUUCCAUAUUUGGACGCUGACGAC	102	0	167	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8450021-8450534	Cluster_4687	Pocillopora_meandrina_HIv1___Sc0000017	8450021	8450534	514	10329	590	0.853035143769968	+	UACGAUCACGUCCGCCAUUAUCACUGAC	2681	45	9282	42	41	332	587	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8458475-8458895	Cluster_4688	Pocillopora_meandrina_HIv1___Sc0000017	8458475	8458895	421	111	34	0.13513513513513514	-	UCUGUUUCCAUAUUUGAACACUGACGAC	32	8	94	6	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8472642-8473137	Cluster_4689	Pocillopora_meandrina_HIv1___Sc0000017	8472642	8473137	496	304	105	0.9967105263157895	+	CCGACAUGCCUGACUAUUUCAAACAAGC	42	10	267	9	3	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8478790-8479217	Cluster_4690	Pocillopora_meandrina_HIv1___Sc0000017	8478790	8479217	428	1673	52	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAA	1432	0	1622	0	0	1	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8485860-8486289	Cluster_4691	Pocillopora_meandrina_HIv1___Sc0000017	8485860	8486289	430	120	23	0.008333333333333333	-	UGGACUUCCGUAUUCCUCUAGAAUAAGAUA	81	0	118	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8491348-8491803	Cluster_4692	Pocillopora_meandrina_HIv1___Sc0000017	8491348	8491803	456	577	156	0.0034662045060658577	-	UCUUCAAUUGGUCUCUGUGCCGGACUGA	64	12	470	17	4	9	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8521175-8521607	Cluster_4693	Pocillopora_meandrina_HIv1___Sc0000017	8521175	8521607	433	378	65	1.0	+	UCUGUUUCUAUAUUUGAACGCUGACGAC	85	1	373	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8533693-8534118	Cluster_4694	Pocillopora_meandrina_HIv1___Sc0000017	8533693	8534118	426	174	63	0.0	-	CCGACAUGCAUGACUAUUUCAAACAAGC	21	3	166	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8579114-8579615	Cluster_4695	Pocillopora_meandrina_HIv1___Sc0000017	8579114	8579615	502	362	124	0.24033149171270718	.	UGUACUGUUUGUAUUUUUUUUCCUGGG	37	4	309	6	10	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8589297-8589726	Cluster_4696	Pocillopora_meandrina_HIv1___Sc0000017	8589297	8589726	430	359	90	0.9220055710306406	+	UGUUGGAGACGGUCAUUUUCUGAAAGGA	110	1	348	3	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8600198-8600945	Cluster_4697	Pocillopora_meandrina_HIv1___Sc0000017	8600198	8600945	748	489	266	0.7955010224948875	.	UGUAAACUUGAGAGUCGUCAGCGUAACA	15	5	447	1	2	9	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8602143-8602976	Cluster_4698	Pocillopora_meandrina_HIv1___Sc0000017	8602143	8602976	834	601	244	0.05324459234608985	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	48	3	575	1	1	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8614396-8614831	Cluster_4699	Pocillopora_meandrina_HIv1___Sc0000017	8614396	8614831	436	13483	400	0.9988133204776385	+	UCUGUUUCCAUAUUUGAACGCUGACGAU	4278	124	12823	21	137	104	274	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8622621-8623331	Cluster_4700	Pocillopora_meandrina_HIv1___Sc0000017	8622621	8623331	711	904	245	0.9966814159292036	+	UGUCAAAUCUUCAAUUGGUCUCUGUGCCGGA	88	0	881	11	1	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8623502-8623931	Cluster_4701	Pocillopora_meandrina_HIv1___Sc0000017	8623502	8623931	430	272	116	1.0	+	UACUUUUAAUCUCUUGUAUACCCUCUUG	23	2	265	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8626004-8626575	Cluster_4702	Pocillopora_meandrina_HIv1___Sc0000017	8626004	8626575	572	349	169	1.0	+	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	30	3	336	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8629991-8631498	Cluster_4703	Pocillopora_meandrina_HIv1___Sc0000017	8629991	8631498	1508	15300	1226	0.9877777777777778	+	UUUCCAUAUUUGAACGCUGACGACAGUAGG	3520	219	14875	16	33	134	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8631645-8632067	Cluster_4704	Pocillopora_meandrina_HIv1___Sc0000017	8631645	8632067	423	144	75	1.0	+	UCCUUCACCUUCGAUCUCAAAGUAAUGUUC	14	0	140	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8636006-8636685	Cluster_4705	Pocillopora_meandrina_HIv1___Sc0000017	8636006	8636685	680	636	259	0.8537735849056604	+	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	32	12	577	7	5	10	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8642086-8642602	Cluster_4706	Pocillopora_meandrina_HIv1___Sc0000017	8642086	8642602	517	1935	306	0.9105943152454781	+	UACGACGUGGUUCUGAGGCAGCGUGACC	139	10	1859	3	6	18	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8642732-8643702	Cluster_4707	Pocillopora_meandrina_HIv1___Sc0000017	8642732	8643702	971	1028	329	0.5184824902723736	.	UCUGUUUCCAUAUUUGAACACUGUCGAC	105	11	951	10	17	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8660633-8661065	Cluster_4708	Pocillopora_meandrina_HIv1___Sc0000017	8660633	8661065	433	606	152	0.9455445544554455	+	UUUACAACGUCCGGCUUGACCAUUUACA	66	7	566	3	7	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8715732-8716380	Cluster_4709	Pocillopora_meandrina_HIv1___Sc0000017	8715732	8716380	649	504	224	0.9305555555555556	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	38	16	456	5	4	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8855629-8856058	Cluster_4710	Pocillopora_meandrina_HIv1___Sc0000017	8855629	8856058	430	199	28	1.0	+	UGAUCCAUGUUAUGACUAUCCGACUGACAGU	40	2	192	0	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8903791-8904209	Cluster_4711	Pocillopora_meandrina_HIv1___Sc0000017	8903791	8904209	419	88	25	1.0	+	GCCUUGUAGAAUUCUUUGUAGG	14	39	13	7	16	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8971226-8971653	Cluster_4712	Pocillopora_meandrina_HIv1___Sc0000017	8971226	8971653	428	153	46	0.0	-	CACUUCCUGAUUUUAACCACAACUGUGUGGU	45	9	129	2	4	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8976790-8977215	Cluster_4713	Pocillopora_meandrina_HIv1___Sc0000017	8976790	8977215	426	82	24	0.012195121951219513	-	UAAUCGUUGGCUUUUUCUCGAGGCGUG	36	1	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9006632-9007116	Cluster_4714	Pocillopora_meandrina_HIv1___Sc0000017	9006632	9007116	485	460	177	0.9543478260869566	+	UUCAAUGGGAAAACGAGAAUAGCGUGAGU	18	29	305	9	13	41	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9062627-9063081	Cluster_4715	Pocillopora_meandrina_HIv1___Sc0000017	9062627	9063081	455	11197	413	0.9996427614539609	+	GCGUUGGUGGUAUAGUGGUGAGCAUAGCU	3960	374	10579	30	49	106	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9090044-9090720	Cluster_4716	Pocillopora_meandrina_HIv1___Sc0000017	9090044	9090720	677	8174	548	0.0025691216050893074	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2224	4	8043	3	55	34	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9090774-9092546	Cluster_4717	Pocillopora_meandrina_HIv1___Sc0000017	9090774	9092546	1773	9324	2352	0.07486057486057486	-	UGAUAGACUGCACGACGAUUUACGUCA	537	92	8474	58	76	278	346	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9151739-9152167	Cluster_4718	Pocillopora_meandrina_HIv1___Sc0000017	9151739	9152167	429	260	57	0.9884615384615385	+	AAGGAGUUAACGACAAGUUGAAGGCGAAG	81	4	229	9	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9244463-9244894	Cluster_4719	Pocillopora_meandrina_HIv1___Sc0000017	9244463	9244894	432	268	102	0.9589552238805971	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	80	1	259	2	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:125517-125940	Cluster_4720	Pocillopora_meandrina_HIv1___Sc0000018	125517	125940	424	9435	151	0.0006359300476947536	-	UCUGACGAAGGGCUGACACUCA	5836	193	16	2744	6274	133	75	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:167338-167767	Cluster_4721	Pocillopora_meandrina_HIv1___Sc0000018	167338	167767	430	83	31	0.9156626506024096	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	30	0	81	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:177198-177766	Cluster_4722	Pocillopora_meandrina_HIv1___Sc0000018	177198	177766	569	372	90	0.0	-	CAACAAUGGACAUAAAAGAAUACAAUGCGUG	101	7	358	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:204995-205696	Cluster_4723	Pocillopora_meandrina_HIv1___Sc0000018	204995	205696	702	269	143	0.9256505576208178	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	26	6	250	1	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:206926-207355	Cluster_4724	Pocillopora_meandrina_HIv1___Sc0000018	206926	207355	430	276	155	0.8586956521739131	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	25	2	249	1	1	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:218816-219711	Cluster_4725	Pocillopora_meandrina_HIv1___Sc0000018	218816	219711	896	834	318	0.7362110311750599	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	145	13	728	3	6	20	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:246943-247783	Cluster_4726	Pocillopora_meandrina_HIv1___Sc0000018	246943	247783	841	819	132	0.007326007326007326	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	202	3	746	0	67	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:255355-256079	Cluster_4727	Pocillopora_meandrina_HIv1___Sc0000018	255355	256079	725	1190	325	0.03697478991596639	-	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	84	18	1083	7	14	11	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:267369-267831	Cluster_4728	Pocillopora_meandrina_HIv1___Sc0000018	267369	267831	463	1159	182	0.04055220017256255	-	UAUUCACACGUGUUAUCUCGUCGCUCG	141	1	1110	3	1	2	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:269536-270067	Cluster_4729	Pocillopora_meandrina_HIv1___Sc0000018	269536	270067	532	2154	249	0.46332404828226553	.	UUCUAGCUCGACUUCACGCU	257	1040	184	354	474	99	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:290221-290739	Cluster_4730	Pocillopora_meandrina_HIv1___Sc0000018	290221	290739	519	483	128	0.004140786749482402	-	AGAUUACUCAUGCGGCCUUUUGGAUAAGA	82	1	470	6	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:303788-304217	Cluster_4731	Pocillopora_meandrina_HIv1___Sc0000018	303788	304217	430	995	65	0.0	-	GAAAUUCGGAGUGGCUGCUUAUUUCAUAGC	624	1	990	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:317636-318339	Cluster_4732	Pocillopora_meandrina_HIv1___Sc0000018	317636	318339	704	286	139	0.9335664335664335	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	28	3	275	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:319566-319998	Cluster_4733	Pocillopora_meandrina_HIv1___Sc0000018	319566	319998	433	237	121	0.8185654008438819	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	24	3	208	2	1	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:396275-396705	Cluster_4734	Pocillopora_meandrina_HIv1___Sc0000018	396275	396705	431	4356	148	0.0006887052341597796	-	UGAUGAACUAGAGAACCAGUGCU	1152	6	890	6	30	3068	356	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:454437-454859	Cluster_4735	Pocillopora_meandrina_HIv1___Sc0000018	454437	454859	423	142	65	0.8591549295774648	+	AACGCUACUACCGUGAGACUGAAG	14	21	87	4	3	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:456707-457148	Cluster_4736	Pocillopora_meandrina_HIv1___Sc0000018	456707	457148	442	414	42	0.785024154589372	.	AUCAGCAAGAAAAGCAGGUGCC	161	11	212	1	163	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:467842-468271	Cluster_4737	Pocillopora_meandrina_HIv1___Sc0000018	467842	468271	430	223	39	1.0	+	GUGAGUCUGAUACAUCUUGCCGCACAUGGA	119	1	170	0	0	9	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:781033-781472	Cluster_4738	Pocillopora_meandrina_HIv1___Sc0000018	781033	781472	440	260	89	0.011538461538461539	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	36	0	256	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:784362-784785	Cluster_4739	Pocillopora_meandrina_HIv1___Sc0000018	784362	784785	424	113	34	0.9911504424778761	+	UGAUUGCAGAGCACAGCAUUGCCACC	16	0	111	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:1177770-1178196	Cluster_4740	Pocillopora_meandrina_HIv1___Sc0000018	1177770	1178196	427	168	65	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	24	2	162	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2098006-2098514	Cluster_4741	Pocillopora_meandrina_HIv1___Sc0000018	2098006	2098514	509	6706	1037	1.0	+	GCUAGUGAUGACAAAAAGAUGACGAGCCUGA	410	1151	3056	661	657	542	639	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2098964-2099437	Cluster_4742	Pocillopora_meandrina_HIv1___Sc0000018	2098964	2099437	474	12215	899	1.0	+	AUAGAAUGAUGAUGCUUUAGACUAGAGU	1996	1470	7596	542	376	1593	638	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2099479-2099957	Cluster_4743	Pocillopora_meandrina_HIv1___Sc0000018	2099479	2099957	479	4262	422	1.0	+	AUAUCUGAUGAAAACCCCUUUCUGACA	453	549	3221	184	130	126	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2100300-2101798	Cluster_4744	Pocillopora_meandrina_HIv1___Sc0000018	2100300	2101798	1499	8405	1404	0.9998810232004759	+	GAUAAGUCACGUCAGUCUGAUU	570	2683	2404	729	1394	649	546	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2102107-2102876	Cluster_4745	Pocillopora_meandrina_HIv1___Sc0000018	2102107	2102876	770	5617	731	1.0	+	GUGGAAUGAUGUAAAAACUU	713	2704	954	607	388	470	494	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2328246-2328664	Cluster_4746	Pocillopora_meandrina_HIv1___Sc0000018	2328246	2328664	419	267	4	1.0	+	GGUGUGUGAUGACUGAAA	140	267	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2367661-2368075	Cluster_4747	Pocillopora_meandrina_HIv1___Sc0000018	2367661	2368075	415	254	158	0.0	-	CUGACUUGAGGAAAUUGCCAUGAUA	17	76	98	20	15	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2443249-2443672	Cluster_4748	Pocillopora_meandrina_HIv1___Sc0000018	2443249	2443672	424	294	153	0.01020408163265306	-	CAGUGGAAGCGUGCUGGGCCCAUAACCCA	15	128	102	22	24	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2462000-2462480	Cluster_4749	Pocillopora_meandrina_HIv1___Sc0000018	2462000	2462480	481	414	128	1.0	+	AGCAGAUGAUGAUUAUGACC	26	102	144	52	48	36	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2542902-2544876	Cluster_4750	Pocillopora_meandrina_HIv1___Sc0000018	2542902	2544876	1975	5532	1421	0.05929139551699204	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	474	18	5306	15	26	58	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2582233-2582685	Cluster_4751	Pocillopora_meandrina_HIv1___Sc0000018	2582233	2582685	453	6189	164	0.00016157699143641945	-	UUUAUUCUGAUAUCAGGGUCACCACCCUAG	1715	36	5211	153	56	685	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2693273-2693701	Cluster_4752	Pocillopora_meandrina_HIv1___Sc0000018	2693273	2693701	429	116	44	1.0	+	UGAGAUCGUGAUGAAAAUUAUUGCUGGAUU	39	9	96	7	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2797804-2798222	Cluster_4753	Pocillopora_meandrina_HIv1___Sc0000018	2797804	2798222	419	960	35	1.0	+	UGCCCGGGUCCUCCACCA	579	960	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2808567-2808976	Cluster_4754	Pocillopora_meandrina_HIv1___Sc0000018	2808567	2808976	410	136	84	0.11764705882352941	-	UGAAUUGAUACGUACUCUCUGAUAUCU	9	0	125	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2886488-2886905	Cluster_4755	Pocillopora_meandrina_HIv1___Sc0000018	2886488	2886905	418	101	2	0.009900990099009901	-	UUGAACUCGACCCUGUCG	100	100	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3029533-3029960	Cluster_4756	Pocillopora_meandrina_HIv1___Sc0000018	3029533	3029960	428	112	25	0.8303571428571429	+	AUUGAAGAUAUUUCAGCGGCUGAGUUGA	73	2	106	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3274720-3275230	Cluster_4757	Pocillopora_meandrina_HIv1___Sc0000018	3274720	3275230	511	211	124	0.004739336492890996	-	AAUUGAAGUGGAAUAAAAGCA	18	45	61	40	26	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3276308-3276721	Cluster_4758	Pocillopora_meandrina_HIv1___Sc0000018	3276308	3276721	414	214	148	0.0	-	CGGUUUGGCGAUCUCUGU	7	57	104	15	8	8	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3348228-3348658	Cluster_4759	Pocillopora_meandrina_HIv1___Sc0000018	3348228	3348658	431	1165	79	0.9793991416309012	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	300	4	1152	1	2	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3520326-3520879	Cluster_4760	Pocillopora_meandrina_HIv1___Sc0000018	3520326	3520879	554	2048	147	0.9814453125	+	UCGUAUUCUUUUCCAUCCUCGCCGAACAGA	642	4	2013	2	4	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3750631-3751057	Cluster_4761	Pocillopora_meandrina_HIv1___Sc0000018	3750631	3751057	427	192	99	0.875	+	UGAGUCGAGGUUAUUCACAAUACGAGC	35	5	162	0	2	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3869724-3870153	Cluster_4762	Pocillopora_meandrina_HIv1___Sc0000018	3869724	3870153	430	253	49	0.003952569169960474	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	82	1	249	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4194708-4195136	Cluster_4763	Pocillopora_meandrina_HIv1___Sc0000018	4194708	4195136	429	236	9	0.9957627118644068	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	207	0	236	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4337764-4338188	Cluster_4764	Pocillopora_meandrina_HIv1___Sc0000018	4337764	4338188	425	631	98	1.0	+	UAGAUCAAGUGUGGUUACUUUAAU	108	53	54	84	116	156	168	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4414758-4415184	Cluster_4765	Pocillopora_meandrina_HIv1___Sc0000018	4414758	4415184	427	210	47	0.004761904761904762	-	CGCGUUUCGAUCGUCAACGUAGGGGAGG	40	0	207	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4484034-4484452	Cluster_4766	Pocillopora_meandrina_HIv1___Sc0000018	4484034	4484452	419	399	25	0.9899749373433584	+	CGGCCUGAAAAAAAAAAA	186	374	1	12	9	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4508023-4508579	Cluster_4767	Pocillopora_meandrina_HIv1___Sc0000018	4508023	4508579	557	5715	557	0.0012248468941382328	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1259	2	5683	7	7	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4508610-4510664	Cluster_4768	Pocillopora_meandrina_HIv1___Sc0000018	4508610	4510664	2055	3221	1316	0.01769636758770568	-	UGACCACGAGCAUUCUGAAUAUCGAGAUUC	65	17	3069	12	18	27	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4564884-4564976	Cluster_4769	Pocillopora_meandrina_HIv1___Sc0000018	4564884	4564976	93	530	60	1.0	+	UAACCUUAUUUGUCUUCACAUGU	143	35	0	42	119	278	56	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000018:4621884-4622307	Cluster_4770	Pocillopora_meandrina_HIv1___Sc0000018	4621884	4622307	424	102	38	0.9803921568627451	+	UGUUGUAUCAAGCGAAAACCGAGAGA	16	2	95	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4692501-4692940	Cluster_4771	Pocillopora_meandrina_HIv1___Sc0000018	4692501	4692940	440	246	127	0.0040650406504065045	-	GCAGUCAUUGUGGCAAGUGUGUAAUAUCU	12	34	142	25	24	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4839414-4839828	Cluster_4772	Pocillopora_meandrina_HIv1___Sc0000018	4839414	4839828	415	190	126	1.0	+	AAUUACUCGAGAUCUUGGAACA	12	46	60	10	27	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4870095-4870517	Cluster_4773	Pocillopora_meandrina_HIv1___Sc0000018	4870095	4870517	423	173	89	0.0	-	GGUCAAGGAUGAUAAUCUCU	12	47	51	31	15	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4873669-4874121	Cluster_4774	Pocillopora_meandrina_HIv1___Sc0000018	4873669	4874121	453	917	51	0.9978189749182116	+	UGGUAGAACCAACUUCGUGUCGA	494	19	8	0	98	772	20	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4889391-4889792	Cluster_4775	Pocillopora_meandrina_HIv1___Sc0000018	4889391	4889792	402	133	92	1.0	+	CUGCACUUAGUUGAACCUUCGACU	6	25	62	11	7	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4969282-4969712	Cluster_4776	Pocillopora_meandrina_HIv1___Sc0000018	4969282	4969712	431	172	59	1.0	+	AAACCGAUACUUCUACCGUUCAACCUGAGA	20	23	112	1	15	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5069169-5069647	Cluster_4777	Pocillopora_meandrina_HIv1___Sc0000018	5069169	5069647	479	236	135	1.0	+	CCAAAUGGCGGAUGCAGAACC	8	92	62	30	24	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5070502-5070916	Cluster_4778	Pocillopora_meandrina_HIv1___Sc0000018	5070502	5070916	415	108	74	1.0	+	CGCUUGGUCAAGGACAUGAAGAUCA	4	27	52	7	8	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5071007-5071618	Cluster_4779	Pocillopora_meandrina_HIv1___Sc0000018	5071007	5071618	612	524	303	1.0	+	GUACGUCGUGGCUACUGGGGUAACA	41	105	260	36	38	44	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5072028-5072445	Cluster_4780	Pocillopora_meandrina_HIv1___Sc0000018	5072028	5072445	418	269	195	1.0	+	AGGGGAACUGGUAUUGUGUCU	5	81	113	24	23	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5072563-5073052	Cluster_4781	Pocillopora_meandrina_HIv1___Sc0000018	5072563	5073052	490	322	224	1.0	+	CCUGGCAAAGAAUCACUCAGGACAGAGAGCU	8	94	135	28	19	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5104121-5105290	Cluster_4782	Pocillopora_meandrina_HIv1___Sc0000018	5104121	5105290	1170	1799	353	0.22234574763757642	.	UCAACGCUUAGCAGACUGGUUUAGUGAUC	213	13	1618	3	8	29	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5127916-5128341	Cluster_4783	Pocillopora_meandrina_HIv1___Sc0000018	5127916	5128341	426	152	28	0.9868421052631579	+	AGUGAUUGAAAAAAAAAAAAAAAAA	24	3	112	3	5	14	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5153901-5154329	Cluster_4784	Pocillopora_meandrina_HIv1___Sc0000018	5153901	5154329	429	85	15	0.0	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	60	0	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5399535-5399962	Cluster_4785	Pocillopora_meandrina_HIv1___Sc0000018	5399535	5399962	428	124	31	0.0	-	UGAACUACUGCUCGUACUCUAGAUGACA	21	0	124	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5914045-5914458	Cluster_4786	Pocillopora_meandrina_HIv1___Sc0000018	5914045	5914458	414	94	60	0.3617021276595745	.	UAGCACGACGUUUGGAAUAGG	6	51	6	16	7	14	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5932011-5932788	Cluster_4787	Pocillopora_meandrina_HIv1___Sc0000018	5932011	5932788	778	859	363	0.36670547147846333	.	UGUAUUCACUUGGGUUAACUCUUCCACA	116	21	743	5	9	16	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5933125-5933535	Cluster_4788	Pocillopora_meandrina_HIv1___Sc0000018	5933125	5933535	411	194	139	0.19072164948453607	-	UGGACUCUAUAAUGUCUUUAAACAUGGU	10	4	169	2	0	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5934317-5934745	Cluster_4789	Pocillopora_meandrina_HIv1___Sc0000018	5934317	5934745	429	457	128	0.04157549234135667	-	UGUAGAAUCAAUCUGUUACUAAGACACC	95	6	427	8	2	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5946594-5947648	Cluster_4790	Pocillopora_meandrina_HIv1___Sc0000018	5946594	5947648	1055	4447	773	0.024735776928266246	-	UGUACUGGUUCUUCAAAUGCUUAACUUUGC	762	21	4293	6	6	57	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5962547-5963374	Cluster_4791	Pocillopora_meandrina_HIv1___Sc0000018	5962547	5963374	828	1991	582	0.365143144148669	.	UGUAUCUGGUUUUUCUGUCUUGAACAAUG	294	29	1604	33	26	189	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5979022-5979452	Cluster_4792	Pocillopora_meandrina_HIv1___Sc0000018	5979022	5979452	431	1477	88	0.0	-	UUCCAGAACAGAGAACCUCUCCCGAUGACC	613	16	1451	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5985449-5986116	Cluster_4793	Pocillopora_meandrina_HIv1___Sc0000018	5985449	5986116	668	924	160	0.0	-	UCUGGUACUUGGACGAUCAACAUGCC	183	5	906	0	0	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5987227-5987656	Cluster_4794	Pocillopora_meandrina_HIv1___Sc0000018	5987227	5987656	430	198	19	0.0	-	UACGAAACUCAUGAUGACAAACAACAAAUG	115	0	197	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5988897-5989562	Cluster_4795	Pocillopora_meandrina_HIv1___Sc0000018	5988897	5989562	666	265	115	0.018867924528301886	-	UCUCUGCUCCUUGAACUGAUAUUAUGAAGC	30	3	245	4	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5990535-5990941	Cluster_4796	Pocillopora_meandrina_HIv1___Sc0000018	5990535	5990941	407	169	79	0.2781065088757396	.	UGACAACAUCAAAAUUUUUAACUGGGC	14	1	158	0	2	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5992584-5993138	Cluster_4797	Pocillopora_meandrina_HIv1___Sc0000018	5992584	5993138	555	1696	266	0.0076650943396226415	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	341	3	1661	1	4	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6015912-6016348	Cluster_4798	Pocillopora_meandrina_HIv1___Sc0000018	6015912	6016348	437	829	147	0.0036188178528347406	-	UGAUUUAUUCCACUCUGAUAUCGUACAG	328	2	816	2	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6018266-6018691	Cluster_4799	Pocillopora_meandrina_HIv1___Sc0000018	6018266	6018691	426	252	148	0.05952380952380952	-	UGACUUCGUAUCGGUCUUCGCUCCAUGCA	13	3	235	1	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6023501-6023925	Cluster_4800	Pocillopora_meandrina_HIv1___Sc0000018	6023501	6023925	425	124	12	0.967741935483871	+	GUGAAGACGAUUAAGUUGACUGGGG	59	0	108	0	0	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6024504-6024931	Cluster_4801	Pocillopora_meandrina_HIv1___Sc0000018	6024504	6024931	428	225	66	0.07555555555555556	-	UGAUGUCUGCUACUUCCUCUUUUUCAGG	41	2	213	0	3	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6024959-6025753	Cluster_4802	Pocillopora_meandrina_HIv1___Sc0000018	6024959	6025753	795	1206	363	0.3681592039800995	.	ACAUGACUUAUCUCCAGAAGAAUUUGAGG	96	13	1080	7	40	15	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6026053-6026481	Cluster_4803	Pocillopora_meandrina_HIv1___Sc0000018	6026053	6026481	429	202	108	0.11386138613861387	-	UCAUCUUUAGUAAAACUGAAAACGUUGUGGA	14	1	188	2	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6041457-6042847	Cluster_4804	Pocillopora_meandrina_HIv1___Sc0000018	6041457	6042847	1391	2813	638	0.12193387842161393	-	UUUCAAAUGCUUUUGUAGAUCAUCUCCAAA	457	18	2707	9	13	34	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6044345-6045617	Cluster_4805	Pocillopora_meandrina_HIv1___Sc0000018	6044345	6045617	1273	714	320	0.09943977591036414	-	UUCUGAAGUACUUUCCCAAUAACAUUGAAA	54	7	643	4	8	32	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6049515-6049986	Cluster_4806	Pocillopora_meandrina_HIv1___Sc0000018	6049515	6049986	472	302	90	0.0	-	UGAUCUGCUCGAACGUGACUUAGCACUAC	30	2	291	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6052009-6052435	Cluster_4807	Pocillopora_meandrina_HIv1___Sc0000018	6052009	6052435	427	103	40	0.0	-	UGACAGUGCGUGAUCUUCUCUUGAUGUU	22	3	97	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6052990-6053419	Cluster_4808	Pocillopora_meandrina_HIv1___Sc0000018	6052990	6053419	430	241	98	0.0	-	UCUAGUUAACGGUUUGUCUUUGAGAACGAC	37	2	233	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6054042-6054708	Cluster_4809	Pocillopora_meandrina_HIv1___Sc0000018	6054042	6054708	667	302	104	0.0	-	UUGGACUGUGCAGCCUUAAUCAGGAACAAC	75	19	222	50	4	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6055723-6056152	Cluster_4810	Pocillopora_meandrina_HIv1___Sc0000018	6055723	6056152	430	100	44	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	28	0	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6060238-6060667	Cluster_4811	Pocillopora_meandrina_HIv1___Sc0000018	6060238	6060667	430	206	73	0.0	-	UUCACGUGCUUGACUCUUUCACCCCAGAUA	26	5	199	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6060669-6061195	Cluster_4812	Pocillopora_meandrina_HIv1___Sc0000018	6060669	6061195	527	347	117	0.0	-	UUGGAACAAUCUUUAAGGUCCUGACGCUG	74	10	319	4	5	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6061223-6061651	Cluster_4813	Pocillopora_meandrina_HIv1___Sc0000018	6061223	6061651	429	122	34	0.0	-	UUGAUUUCUGCUUCAAGGGACUGUUGUGG	50	0	122	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6066390-6066818	Cluster_4814	Pocillopora_meandrina_HIv1___Sc0000018	6066390	6066818	429	178	72	0.011235955056179775	-	UGUUUGUCGAUUAGGCUGAGAAAUUUGUGU	12	23	144	5	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6067322-6067752	Cluster_4815	Pocillopora_meandrina_HIv1___Sc0000018	6067322	6067752	431	1370	119	0.0036496350364963502	-	UGACUCAACUUUACGUAACUUAUGGCUUU	252	6	1308	0	4	9	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6068424-6068852	Cluster_4816	Pocillopora_meandrina_HIv1___Sc0000018	6068424	6068852	429	151	57	0.06622516556291391	-	CAGGUAUAGGUUACUCAAGAUUAAUUGAU	37	3	132	3	9	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6073845-6074443	Cluster_4817	Pocillopora_meandrina_HIv1___Sc0000018	6073845	6074443	599	350	135	0.0	-	UAGGACAGUACAUGGUGUAGCUACCAUCAUC	43	6	339	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6075187-6075821	Cluster_4818	Pocillopora_meandrina_HIv1___Sc0000018	6075187	6075821	635	398	128	0.0	-	UGCGAACUCCAAACUUUCUGUAUCCACAGC	45	2	389	0	4	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6083879-6084308	Cluster_4819	Pocillopora_meandrina_HIv1___Sc0000018	6083879	6084308	430	410	81	0.00975609756097561	-	UAUGACGGUACUUUCAAUGGCUUCAGGC	133	5	376	1	18	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6085166-6085593	Cluster_4820	Pocillopora_meandrina_HIv1___Sc0000018	6085166	6085593	428	204	97	0.004901960784313725	-	UUUGAUUGACGUACGGUAUUUGAGACGC	26	3	191	1	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6086451-6088566	Cluster_4821	Pocillopora_meandrina_HIv1___Sc0000018	6086451	6088566	2116	21255	3701	0.018677958127499412	-	UGUGAUCUUGUAGAGUUUCAGAAAAUGA	1664	112	20584	57	65	206	231	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6090996-6091424	Cluster_4822	Pocillopora_meandrina_HIv1___Sc0000018	6090996	6091424	429	288	117	0.017361111111111112	-	CUGUUGCUGAAUUCGAUACCCAUUUUCGG	21	4	278	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6092880-6093306	Cluster_4823	Pocillopora_meandrina_HIv1___Sc0000018	6092880	6093306	427	229	98	0.021834061135371178	-	UUGGCUGUGCUUUGCUGAAUCUUGUCC	17	3	220	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6098946-6099537	Cluster_4824	Pocillopora_meandrina_HIv1___Sc0000018	6098946	6099537	592	253	116	0.0	-	UCCUCGAUCUCGUUUUGAAUAGUUUCAAC	24	2	249	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6100824-6101236	Cluster_4825	Pocillopora_meandrina_HIv1___Sc0000018	6100824	6101236	413	189	100	0.0	-	UGGCAGUAGAAUGGGGUUCCUCGAGUUC	8	2	180	1	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6102762-6103171	Cluster_4826	Pocillopora_meandrina_HIv1___Sc0000018	6102762	6103171	410	101	48	0.06930693069306931	-	CUAUUUCUCAACAAAUCGUCUUCUGUUAG	24	1	91	2	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6103919-6104805	Cluster_4827	Pocillopora_meandrina_HIv1___Sc0000018	6103919	6104805	887	2024	335	0.046442687747035576	-	AUCCCACUCCUGACACCA	610	942	1013	9	7	13	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6108751-6109178	Cluster_4828	Pocillopora_meandrina_HIv1___Sc0000018	6108751	6109178	428	125	30	0.056	-	UAACCCGAGAACUGACACGUGAGUAGUC	73	3	115	2	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6110872-6111291	Cluster_4829	Pocillopora_meandrina_HIv1___Sc0000018	6110872	6111291	420	187	79	0.0	-	UCUUUAAUCUUGUGUAGUACUCCUAUCAGU	22	1	182	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6111313-6111742	Cluster_4830	Pocillopora_meandrina_HIv1___Sc0000018	6111313	6111742	430	239	104	0.0	-	UGACUCUUGGUAAUCUGAACUGAUCUC	21	6	228	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6112787-6113215	Cluster_4831	Pocillopora_meandrina_HIv1___Sc0000018	6112787	6113215	429	132	32	0.0	-	AUCCUGUACAAUUCUGUAUAUCAGACCAUG	39	1	122	0	5	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6161079-6161508	Cluster_4832	Pocillopora_meandrina_HIv1___Sc0000018	6161079	6161508	430	94	26	0.010638297872340425	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	1	92	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6492736-6493260	Cluster_4833	Pocillopora_meandrina_HIv1___Sc0000018	6492736	6493260	525	1284	148	0.9992211838006231	+	CGACCAAAAAUCUUCUAGUGGGGGCUGGA	703	8	1243	6	15	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6620816-6621632	Cluster_4834	Pocillopora_meandrina_HIv1___Sc0000018	6620816	6621632	817	219	47	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	53	0	219	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6654230-6655045	Cluster_4835	Pocillopora_meandrina_HIv1___Sc0000018	6654230	6655045	816	207	61	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	48	1	206	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6671405-6671836	Cluster_4836	Pocillopora_meandrina_HIv1___Sc0000018	6671405	6671836	432	555	235	0.872072072072072	+	UGUAUGAUGUUCAGGAUUUCAGGUCUG	38	15	506	1	4	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6672102-6672809	Cluster_4837	Pocillopora_meandrina_HIv1___Sc0000018	6672102	6672809	708	2012	407	0.9433399602385686	+	UGAUUUCCUGUUUGACUUGGUUGAAUG	206	15	1925	7	11	20	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6674039-6674468	Cluster_4838	Pocillopora_meandrina_HIv1___Sc0000018	6674039	6674468	430	267	133	0.8539325842696629	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	0	245	2	2	2	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6855499-6855592	Cluster_4839	Pocillopora_meandrina_HIv1___Sc0000018	6855499	6855592	94	6913	289	1.0	+	GGAUUAAAAUUUGUUGGGUGUGC	1244	738	316	522	428	3428	1481	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000018:6857660-6858086	Cluster_4840	Pocillopora_meandrina_HIv1___Sc0000018	6857660	6858086	427	20161	307	1.0	+	CUCCGAACAGUUUUAGUCUGA	5735	4328	142	6562	1468	4746	2915	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6967801-6968229	Cluster_4841	Pocillopora_meandrina_HIv1___Sc0000018	6967801	6968229	429	86	17	0.0	-	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	42	0	81	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6980526-6981623	Cluster_4842	Pocillopora_meandrina_HIv1___Sc0000018	6980526	6981623	1098	1692	506	0.1317966903073286	-	UCUGUGAUUUGUAGCUUCGAGCUCUAAC	116	31	1381	64	45	100	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6981728-6982155	Cluster_4843	Pocillopora_meandrina_HIv1___Sc0000018	6981728	6982155	428	403	119	0.11910669975186104	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	77	1	375	2	3	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7025700-7026117	Cluster_4844	Pocillopora_meandrina_HIv1___Sc0000018	7025700	7026117	418	99	22	1.0	+	UCCGGCUCGAAGGACCAU	44	96	1	2	0	0	0	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000018:7138819-7139235	Cluster_4845	Pocillopora_meandrina_HIv1___Sc0000018	7138819	7139235	417	263	183	1.0	+	AUAAGAUGUUGUCGUGUGCU	7	77	101	20	26	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7593444-7593873	Cluster_4846	Pocillopora_meandrina_HIv1___Sc0000018	7593444	7593873	430	152	80	1.0	+	GAUGACUACGUUAAAAGAUUACUGAACGCU	22	19	111	2	11	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7623761-7624181	Cluster_4847	Pocillopora_meandrina_HIv1___Sc0000018	7623761	7624181	421	86	33	0.9651162790697675	+	GUCUGUUAGAACCUGACCAAGCAU	12	10	25	14	14	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7694968-7695392	Cluster_4848	Pocillopora_meandrina_HIv1___Sc0000018	7694968	7695392	425	101	36	0.04950495049504951	-	AACUACUGCUCGUACUCUAGAUAUGAU	21	12	85	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7843989-7844410	Cluster_4849	Pocillopora_meandrina_HIv1___Sc0000018	7843989	7844410	422	2963	67	1.0	+	UGAAAAUCUUUGCUCUGA	1419	2460	0	419	32	6	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7849912-7850333	Cluster_4850	Pocillopora_meandrina_HIv1___Sc0000018	7849912	7850333	422	249	134	0.024096385542168676	-	UCGAAUCCCACUUCUGACACCA	25	129	47	28	35	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7852651-7853079	Cluster_4851	Pocillopora_meandrina_HIv1___Sc0000018	7852651	7853079	429	2646	82	1.0	+	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1627	7	2632	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7863900-7864328	Cluster_4852	Pocillopora_meandrina_HIv1___Sc0000018	7863900	7864328	429	200	65	0.97	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	68	0	185	0	0	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7864532-7864959	Cluster_4853	Pocillopora_meandrina_HIv1___Sc0000018	7864532	7864959	428	180	68	0.8777777777777778	+	ACAAGCGAUAUGUGGACCUUGAUCUGCGA	26	0	177	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7869456-7869886	Cluster_4854	Pocillopora_meandrina_HIv1___Sc0000018	7869456	7869886	431	234	48	0.9572649572649573	+	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	43	0	226	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7939216-7939628	Cluster_4855	Pocillopora_meandrina_HIv1___Sc0000018	7939216	7939628	413	145	93	0.06206896551724138	-	UAUUUGUGGAGGUCUUUGACGAUGGUAAA	9	0	133	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7966080-7967275	Cluster_4856	Pocillopora_meandrina_HIv1___Sc0000018	7966080	7967275	1196	1171	491	0.06917164816396243	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	113	13	1082	5	4	20	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7967559-7969176	Cluster_4857	Pocillopora_meandrina_HIv1___Sc0000018	7967559	7969176	1618	2981	1050	0.06071787990607179	-	UCGGACAUGACGUGUGAAAGAACCGCGCC	103	19	2810	7	9	43	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7969310-7969744	Cluster_4858	Pocillopora_meandrina_HIv1___Sc0000018	7969310	7969744	435	319	146	0.03761755485893417	-	UGACUAUCUGUUCUGGAAUUCCAAAUC	20	1	311	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8063916-8065983	Cluster_4859	Pocillopora_meandrina_HIv1___Sc0000018	8063916	8065983	2068	6003	1386	0.08229218723971347	-	UGUGAAUACUUCAGCUGGCCAACGAUC	852	100	5282	83	118	220	200	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8066079-8066502	Cluster_4860	Pocillopora_meandrina_HIv1___Sc0000018	8066079	8066502	424	657	97	0.030441400304414	-	AAGGAAACUCUCACGUAUGAAGA	314	118	95	5	38	368	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8128517-8129091	Cluster_4861	Pocillopora_meandrina_HIv1___Sc0000018	8128517	8129091	575	934	256	0.16595289079229122	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	122	4	877	3	5	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8129368-8129860	Cluster_4862	Pocillopora_meandrina_HIv1___Sc0000018	8129368	8129860	493	959	268	0.12095933263816476	-	UAUAUAUCCUCUGUGAUUGUCUGAUCAC	188	2	900	6	5	24	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8130165-8131142	Cluster_4863	Pocillopora_meandrina_HIv1___Sc0000018	8130165	8131142	978	1914	373	0.09508881922675026	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	314	25	1826	2	3	9	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8131536-8132215	Cluster_4864	Pocillopora_meandrina_HIv1___Sc0000018	8131536	8132215	680	283	148	0.07420494699646643	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	27	0	259	6	1	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8253590-8254029	Cluster_4865	Pocillopora_meandrina_HIv1___Sc0000018	8253590	8254029	440	202	80	0.9108910891089109	+	UUGGAUCUCAAUCGAAACAGAAUUUCCUG	28	6	188	1	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8312293-8312720	Cluster_4866	Pocillopora_meandrina_HIv1___Sc0000018	8312293	8312720	428	169	29	0.9704142011834319	+	UCUUGCUUUGGGCUAACGAUAAGACGUG	53	0	165	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8324947-8325369	Cluster_4867	Pocillopora_meandrina_HIv1___Sc0000018	8324947	8325369	423	102	38	0.7647058823529411	.	UCGUGCAAUUUUGAGAACUUUCA	58	14	17	0	3	63	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8380667-8381089	Cluster_4868	Pocillopora_meandrina_HIv1___Sc0000018	8380667	8381089	423	360	50	0.9916666666666667	+	UUCGCGUCUGAAGCUGUUAGAGU	148	43	9	5	82	212	9	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8453579-8454328	Cluster_4869	Pocillopora_meandrina_HIv1___Sc0000018	8453579	8454328	750	808	256	0.9752475247524752	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	80	1	789	2	4	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8454609-8455933	Cluster_4870	Pocillopora_meandrina_HIv1___Sc0000018	8454609	8455933	1325	1622	712	0.9223181257706535	+	UGUGAGAAAAGGAUUGAUCUGUUUUGC	42	11	1514	8	8	24	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8546192-8547526	Cluster_4871	Pocillopora_meandrina_HIv1___Sc0000018	8546192	8547526	1335	2005	623	0.1087281795511222	-	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	477	21	1880	2	17	21	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8547643-8548485	Cluster_4872	Pocillopora_meandrina_HIv1___Sc0000018	8547643	8548485	843	466	202	0.11373390557939914	-	UGUGUCAGAACCCGGCUUGCAUAAGUGA	95	13	429	2	6	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8548969-8549396	Cluster_4873	Pocillopora_meandrina_HIv1___Sc0000018	8548969	8549396	428	164	62	0.012195121951219513	-	UAGGUAUACCGUGAUUGGAGAAAUGGCGUU	17	0	162	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8549581-8550019	Cluster_4874	Pocillopora_meandrina_HIv1___Sc0000018	8549581	8550019	439	4465	428	0.008062709966405375	-	UGAUGUAACCGUGAUCUUUGAAGGCCCGA	786	7	4332	23	10	22	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8558410-8558819	Cluster_4875	Pocillopora_meandrina_HIv1___Sc0000018	8558410	8558819	410	135	69	0.9777777777777777	+	UAAUCGCGGUAACAGCAGAACUUCCUUGGGU	20	0	131	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:18658-19086	Cluster_4876	Pocillopora_meandrina_HIv1___Sc0000019	18658	19086	429	187	38	0.0213903743315508	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	74	0	176	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:37218-37646	Cluster_4877	Pocillopora_meandrina_HIv1___Sc0000019	37218	37646	429	175	42	0.005714285714285714	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	75	0	161	1	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:55061-55491	Cluster_4878	Pocillopora_meandrina_HIv1___Sc0000019	55061	55491	431	398	69	0.010050251256281407	-	UGAUGAGCGAUAUCGCAGAACAGCUGCUGA	66	1	393	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:55801-56229	Cluster_4879	Pocillopora_meandrina_HIv1___Sc0000019	55801	56229	429	200	44	0.015	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	87	0	187	0	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:75218-76278	Cluster_4880	Pocillopora_meandrina_HIv1___Sc0000019	75218	76278	1061	3293	693	0.6258730640753113	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	435	134	2907	20	67	57	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:154260-154856	Cluster_4881	Pocillopora_meandrina_HIv1___Sc0000019	154260	154856	597	5623	504	0.9960874977769874	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	821	14	5554	2	6	15	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:182875-183304	Cluster_4882	Pocillopora_meandrina_HIv1___Sc0000019	182875	183304	430	370	36	0.002702702702702703	-	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	162	0	370	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:184691-185113	Cluster_4883	Pocillopora_meandrina_HIv1___Sc0000019	184691	185113	423	92	40	0.7717391304347826	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	20	0	84	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:187362-187790	Cluster_4884	Pocillopora_meandrina_HIv1___Sc0000019	187362	187790	429	116	52	0.0	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	32	1	107	1	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:213664-214087	Cluster_4885	Pocillopora_meandrina_HIv1___Sc0000019	213664	214087	424	1523	87	1.0	+	UACAAAAUGUGCUUCAGGUCCAAU	674	53	39	107	63	319	942	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:410963-411377	Cluster_4886	Pocillopora_meandrina_HIv1___Sc0000019	410963	411377	415	233	156	0.0	-	CUUCUGUUCUGGAAAUUCUUGACA	8	37	129	20	11	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:412636-413053	Cluster_4887	Pocillopora_meandrina_HIv1___Sc0000019	412636	413053	418	329	240	0.00303951367781155	-	CUCGUGAGAUGCUGCAGCAGAACA	8	70	131	26	35	29	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:414464-414889	Cluster_4888	Pocillopora_meandrina_HIv1___Sc0000019	414464	414889	426	290	190	0.0	-	AUCGAGUUUGGAGAGCUGUAAGGAGUUGA	14	69	132	29	15	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:454049-454847	Cluster_4889	Pocillopora_meandrina_HIv1___Sc0000019	454049	454847	799	1598	512	0.05131414267834793	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	211	13	1499	8	10	27	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:646583-647106	Cluster_4890	Pocillopora_meandrina_HIv1___Sc0000019	646583	647106	524	1417	221	0.02399435426958363	-	UUUGAUAUAAAGGUUGUGGAAAAACAGU	170	7	1345	6	6	30	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:813193-813621	Cluster_4891	Pocillopora_meandrina_HIv1___Sc0000019	813193	813621	429	427	120	0.04215456674473068	-	UGUAGAAUCAAUCUGUUACUAAGACACC	99	0	403	9	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:904555-904984	Cluster_4892	Pocillopora_meandrina_HIv1___Sc0000019	904555	904984	430	348	48	0.011494252873563218	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	149	1	342	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:905738-906334	Cluster_4893	Pocillopora_meandrina_HIv1___Sc0000019	905738	906334	597	5730	488	0.004013961605584642	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	859	17	5662	4	9	8	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1035043-1035449	Cluster_4894	Pocillopora_meandrina_HIv1___Sc0000019	1035043	1035449	407	149	99	0.0	-	AACAGAAACUGACGCGUCA	9	43	64	11	14	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1236348-1236769	Cluster_4895	Pocillopora_meandrina_HIv1___Sc0000019	1236348	1236769	422	271	114	1.0	+	GGUGUCUGAAUCUGACUGAGA	58	47	65	78	31	39	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1262957-1263485	Cluster_4896	Pocillopora_meandrina_HIv1___Sc0000019	1262957	1263485	529	2990	706	0.00033444816053511704	-	GUUUGAUGAUGACUUCUGCCAUGCU	160	707	1175	205	192	191	520	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1280313-1280734	Cluster_4897	Pocillopora_meandrina_HIv1___Sc0000019	1280313	1280734	422	498	55	0.9698795180722891	+	UGGAAUAAUAAUAGUGGUACU	192	29	0	287	161	19	2	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1327248-1327665	Cluster_4898	Pocillopora_meandrina_HIv1___Sc0000019	1327248	1327665	418	80	3	0.9875	+	CACUCCCUAGACCUCAUU	73	79	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1446512-1447028	Cluster_4899	Pocillopora_meandrina_HIv1___Sc0000019	1446512	1447028	517	16100	520	0.9503105590062112	+	CGAUCCAACAAGAACAAUAUGUGCUGACC	3760	13	15783	14	13	57	220	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1824339-1824957	Cluster_4900	Pocillopora_meandrina_HIv1___Sc0000019	1824339	1824957	619	540	220	0.32037037037037036	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	61	7	484	1	2	12	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1838518-1838935	Cluster_4901	Pocillopora_meandrina_HIv1___Sc0000019	1838518	1838935	418	76	26	1.0	+	AAGAAAGAGGACCCUGGGAU	9	37	2	25	6	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1884122-1884540	Cluster_4902	Pocillopora_meandrina_HIv1___Sc0000019	1884122	1884540	419	912	47	0.9978070175438597	+	CGCUACUUUGACCUCAUU	474	907	1	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1960329-1960763	Cluster_4903	Pocillopora_meandrina_HIv1___Sc0000019	1960329	1960763	435	1235	257	0.0008097165991902834	-	GAAUAAUUUUGUUGAGGUGCAUUAUCUGACU	137	122	967	44	31	29	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1960846-1961285	Cluster_4904	Pocillopora_meandrina_HIv1___Sc0000019	1960846	1961285	440	1192	236	0.0016778523489932886	-	UUUUGAUGUUGAGAUGCAGUUAUCUGACU	148	49	1049	29	23	22	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1990219-1990640	Cluster_4905	Pocillopora_meandrina_HIv1___Sc0000019	1990219	1990640	422	1450	56	1.0	+	UCUGACGAAGGGCUGACACUCA	868	20	1	445	944	24	16	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1996128-1996558	Cluster_4906	Pocillopora_meandrina_HIv1___Sc0000019	1996128	1996558	431	253	104	0.23715415019762845	.	UGCCAGAAGUGUGAAACUACUUGAACCG	31	6	237	1	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2021781-2022202	Cluster_4907	Pocillopora_meandrina_HIv1___Sc0000019	2021781	2022202	422	70	2	0.9857142857142858	+	UCUGACGAAGGGCUGACACUCG	69	0	1	0	69	0	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2023002-2023431	Cluster_4908	Pocillopora_meandrina_HIv1___Sc0000019	2023002	2023431	430	351	57	0.9829059829059829	+	GGCAGUGGUUUUUUGGAUUCUGAUCAGUGU	107	2	342	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2027003-2027614	Cluster_4909	Pocillopora_meandrina_HIv1___Sc0000019	2027003	2027614	612	204	94	0.5196078431372549	.	UGGGCUGUUAUUCGUUUGAUAUCAUAAAUC	19	4	189	0	1	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2047134-2047555	Cluster_4910	Pocillopora_meandrina_HIv1___Sc0000019	2047134	2047555	422	80	3	1.0	+	UCUGACGAAGGGCUGACACUCG	78	0	0	0	79	1	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2048332-2048767	Cluster_4911	Pocillopora_meandrina_HIv1___Sc0000019	2048332	2048767	436	796	140	0.9296482412060302	+	GGCAGUGGUUUUUUGGAUUCUGAUCAGUGU	158	12	763	7	7	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2052530-2052967	Cluster_4912	Pocillopora_meandrina_HIv1___Sc0000019	2052530	2052967	438	399	170	0.3283208020050125	.	AUCUACUACAGAUCGCUUGAUGGAUUGCA	32	18	363	4	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2099238-2099681	Cluster_4913	Pocillopora_meandrina_HIv1___Sc0000019	2099238	2099681	444	492	114	0.24390243902439024	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	186	0	475	3	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2423518-2424063	Cluster_4914	Pocillopora_meandrina_HIv1___Sc0000019	2423518	2424063	546	3614	396	0.037354731599335916	-	UCGAUUCGUAAACUGUGCCAAUGGUUGUC	557	34	3519	4	11	13	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2426209-2426803	Cluster_4915	Pocillopora_meandrina_HIv1___Sc0000019	2426209	2426803	595	599	215	0.17362270450751252	-	UGUAAUAAAGUAUCUGUAACACCUGAUGGGC	72	6	573	1	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2463849-2464507	Cluster_4916	Pocillopora_meandrina_HIv1___Sc0000019	2463849	2464507	659	27785	727	3.5990642432967426e-05	-	UUUCCAUAUUUGAACGCUGACGACAGUACGU	5395	8	27429	7	8	149	184	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2480011-2480551	Cluster_4917	Pocillopora_meandrina_HIv1___Sc0000019	2480011	2480551	541	557	134	0.22621184919210055	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	188	0	532	6	1	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2503653-2504078	Cluster_4918	Pocillopora_meandrina_HIv1___Sc0000019	2503653	2504078	426	88	34	0.9659090909090909	+	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	19	0	87	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2566821-2567246	Cluster_4919	Pocillopora_meandrina_HIv1___Sc0000019	2566821	2567246	426	200	106	0.0	-	GAUGGAUGACCUUGAAUGAUGGGAGCA	19	23	110	11	9	32	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2716498-2716927	Cluster_4920	Pocillopora_meandrina_HIv1___Sc0000019	2716498	2716927	430	89	30	0.9213483146067416	+	GUGAGUCUGAUACAUCUUGCCGCACAUGGA	47	2	82	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2737293-2737718	Cluster_4921	Pocillopora_meandrina_HIv1___Sc0000019	2737293	2737718	426	270	34	0.0	-	AGGGACUGAAACAUCGACUGAAGACA	59	2	81	43	1	40	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2861479-2861905	Cluster_4922	Pocillopora_meandrina_HIv1___Sc0000019	2861479	2861905	427	166	71	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	18	2	155	2	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2977964-2978402	Cluster_4923	Pocillopora_meandrina_HIv1___Sc0000019	2977964	2978402	439	448	168	0.0	-	UCCUAAAUCGAUCUUAUCUGUCUGUAAUU	37	0	407	7	3	24	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3338497-3339094	Cluster_4924	Pocillopora_meandrina_HIv1___Sc0000019	3338497	3339094	598	189	103	0.005291005291005291	-	UUGGCUCUUUCACUUCGAACUGAUUUUGA	11	0	183	2	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3406670-3407099	Cluster_4925	Pocillopora_meandrina_HIv1___Sc0000019	3406670	3407099	430	881	138	0.9977298524404086	+	AAAAGAACGAAGAAGCUGCCAAGA	237	15	343	108	9	72	334	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3506636-3507081	Cluster_4926	Pocillopora_meandrina_HIv1___Sc0000019	3506636	3507081	446	289	108	0.6020761245674741	.	UGUGACACUUUGAGACACUCGUGAGACA	44	1	266	7	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3563986-3564415	Cluster_4927	Pocillopora_meandrina_HIv1___Sc0000019	3563986	3564415	430	162	36	0.0	-	UGUACUGUGAACAUAGUGUUACCAACCAUU	78	0	162	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3566354-3567050	Cluster_4928	Pocillopora_meandrina_HIv1___Sc0000019	3566354	3567050	697	2002	324	0.034465534465534464	-	UUGGACGCGUUGCUUGUCUGAACAAGGC	230	3	1833	113	3	25	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3567084-3567520	Cluster_4929	Pocillopora_meandrina_HIv1___Sc0000019	3567084	3567520	437	315	105	0.02857142857142857	-	UGAUCAUGCCGUCUGAUGCUAUGCCUUU	63	0	310	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3593610-3594168	Cluster_4930	Pocillopora_meandrina_HIv1___Sc0000019	3593610	3594168	559	486	95	0.0	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	85	37	337	106	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3721231-3721657	Cluster_4931	Pocillopora_meandrina_HIv1___Sc0000019	3721231	3721657	427	119	24	0.0	-	UCUUUCUGUGUUCAGUAGUGAUCUGCAUC	35	0	119	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3735302-3735776	Cluster_4932	Pocillopora_meandrina_HIv1___Sc0000019	3735302	3735776	475	276	103	0.010869565217391304	-	UGAAUCUUGAUGUGAGUGCUGUCAACACA	37	2	263	2	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3736324-3736752	Cluster_4933	Pocillopora_meandrina_HIv1___Sc0000019	3736324	3736752	429	1052	133	0.015209125475285171	-	UGUUGAACUCUUGCUGCUUGUCAGUGAC	532	4	1008	0	29	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3740698-3741217	Cluster_4934	Pocillopora_meandrina_HIv1___Sc0000019	3740698	3741217	520	975	278	0.18051282051282053	-	UGAUAUGACCUUCGGCAAAAAACUGGA	99	3	860	3	4	27	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3741220-3742487	Cluster_4935	Pocillopora_meandrina_HIv1___Sc0000019	3741220	3742487	1268	1391	540	0.2135154565061107	.	UGUAACUGGUUCACUGCGAUUUUGUAGU	102	14	1201	13	13	48	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3744265-3745833	Cluster_4936	Pocillopora_meandrina_HIv1___Sc0000019	3744265	3745833	1569	3291	857	0.773017319963537	.	UUGGUUCGGUUGUUGUCACUUUUGAAGU	266	56	2967	14	26	65	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3746101-3746545	Cluster_4937	Pocillopora_meandrina_HIv1___Sc0000019	3746101	3746545	445	250	127	0.172	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	48	1	217	1	5	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3747775-3748476	Cluster_4938	Pocillopora_meandrina_HIv1___Sc0000019	3747775	3748476	702	303	151	0.056105610561056105	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	42	3	281	2	8	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3750255-3750997	Cluster_4939	Pocillopora_meandrina_HIv1___Sc0000019	3750255	3750997	743	563	228	0.8952042628774423	+	UCGCUGUAUUAAUGAACGCUUUUUCGGGA	62	2	518	3	6	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3756008-3758566	Cluster_4940	Pocillopora_meandrina_HIv1___Sc0000019	3756008	3758566	2559	4470	1295	0.04496644295302014	-	CUCCAUCUUGUCUGUUGAGUUCAACACC	169	26	4240	16	12	76	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3764470-3764885	Cluster_4941	Pocillopora_meandrina_HIv1___Sc0000019	3764470	3764885	416	113	56	0.035398230088495575	-	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	12	2	105	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3765659-3766696	Cluster_4942	Pocillopora_meandrina_HIv1___Sc0000019	3765659	3766696	1038	2536	696	0.06624605678233439	-	UGUACUUUCUUUGGGCCAUGUAAUCU	165	30	2342	37	11	42	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3766787-3767719	Cluster_4943	Pocillopora_meandrina_HIv1___Sc0000019	3766787	3767719	933	1324	416	0.14652567975830816	-	UGUGUGUUGAUGACAUCUUUGGGUAAAA	106	11	1152	7	12	55	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3769159-3769595	Cluster_4944	Pocillopora_meandrina_HIv1___Sc0000019	3769159	3769595	437	278	120	0.2302158273381295	.	UGUGAUUUCAACUGUGAGUGUCAGAA	14	3	237	3	9	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3769609-3770163	Cluster_4945	Pocillopora_meandrina_HIv1___Sc0000019	3769609	3770163	555	1037	254	0.02700096432015429	-	UGCUUGACUUAUAGUCACUGUACAACUGACU	83	3	1018	5	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3773355-3773782	Cluster_4946	Pocillopora_meandrina_HIv1___Sc0000019	3773355	3773782	428	221	97	0.0	-	UCGGAAACUCUGUCGCUCUCUUAUAUUCU	20	4	210	0	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3774113-3774760	Cluster_4947	Pocillopora_meandrina_HIv1___Sc0000019	3774113	3774760	648	2493	408	0.010028078620136383	-	UCCAACUGUCAUGAACUUGUUACAAUUUAC	249	39	2388	5	13	23	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3775176-3775611	Cluster_4948	Pocillopora_meandrina_HIv1___Sc0000019	3775176	3775611	436	1025	120	0.000975609756097561	-	UAAUAUCAUCUUACAAAUGUUUAGGACAUG	319	2	1017	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3776588-3777012	Cluster_4949	Pocillopora_meandrina_HIv1___Sc0000019	3776588	3777012	425	164	67	0.006097560975609756	-	UGUUCUCUGCGAUGUGAUAGAAUCCACGUGC	28	7	149	1	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3777317-3777835	Cluster_4950	Pocillopora_meandrina_HIv1___Sc0000019	3777317	3777835	519	415	153	0.016867469879518072	-	UCUUAUCUGCAAGAUGCUUCUGGAAACGC	30	3	401	0	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3779708-3781221	Cluster_4951	Pocillopora_meandrina_HIv1___Sc0000019	3779708	3781221	1514	32654	3191	0.047712378269124764	-	UGUGAAACCCCGGUCUGCCAUAACCAUGUC	3904	349	31073	119	202	288	623	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3782569-3783025	Cluster_4952	Pocillopora_meandrina_HIv1___Sc0000019	3782569	3783025	457	279	133	0.0	-	UAAGAACGAGACGUCCAGAAGAAGACUUUU	38	1	269	1	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3783437-3784268	Cluster_4953	Pocillopora_meandrina_HIv1___Sc0000019	3783437	3784268	832	686	214	0.0	-	UUCGCGCGAAGAUCUAAAAAAAACAUUUGU	156	2	671	5	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3787828-3788407	Cluster_4954	Pocillopora_meandrina_HIv1___Sc0000019	3787828	3788407	580	200	70	0.045	-	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	29	2	188	2	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3792172-3792891	Cluster_4955	Pocillopora_meandrina_HIv1___Sc0000019	3792172	3792891	720	104864	1395	0.00012397009459871834	-	UAGGAAUUGCCCUGGACUGCAGUAGAGGC	24159	191	103867	93	37	458	218	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3793197-3793857	Cluster_4956	Pocillopora_meandrina_HIv1___Sc0000019	3793197	3793857	661	7375	498	0.15905084745762713	-	UUGAUUUUGAUGGGAUGCUGCUGCCCUGUA	795	195	6433	42	110	313	282	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3796494-3797437	Cluster_4957	Pocillopora_meandrina_HIv1___Sc0000019	3796494	3797437	944	6526	754	0.032178976402083975	-	UGCUUCAGAUUACUCGACAUGCUAGACA	439	155	6055	62	43	53	158	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3797742-3799350	Cluster_4958	Pocillopora_meandrina_HIv1___Sc0000019	3797742	3799350	1609	8220	1179	0.01995133819951338	-	UAUGAUCUUACAAGAACUGAACUGUGUA	822	21	8045	12	25	44	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3802607-3803033	Cluster_4959	Pocillopora_meandrina_HIv1___Sc0000019	3802607	3803033	427	160	53	0.0	-	UGAUGUUAUACUGUGAAAUCUCGUACCCA	17	1	156	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3804226-3805530	Cluster_4960	Pocillopora_meandrina_HIv1___Sc0000019	3804226	3805530	1305	12349	1344	0.06632115960806544	-	UAUAAUCUGACCACGUCUCUGACUGGGC	1589	188	11346	77	69	275	394	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3809983-3810411	Cluster_4961	Pocillopora_meandrina_HIv1___Sc0000019	3809983	3810411	429	369	67	0.01084010840108401	-	UGAGGAACUUGAAUGGAUAACUCCGGAU	97	1	337	1	1	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3814286-3815767	Cluster_4962	Pocillopora_meandrina_HIv1___Sc0000019	3814286	3815767	1482	14931	1946	0.06489853325296363	-	UCCAUCUAUUGAAACAGCAACUUUGCACACU	1409	82	13708	62	196	234	649	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3816734-3817153	Cluster_4963	Pocillopora_meandrina_HIv1___Sc0000019	3816734	3817153	420	216	83	0.0	-	GAAGAAGUACAAGUGGUAG	39	58	101	53	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3821150-3821560	Cluster_4964	Pocillopora_meandrina_HIv1___Sc0000019	3821150	3821560	411	192	113	0.005208333333333333	-	UAAGUCUGUGAGCUUACUGAUUGUAGGUA	27	4	183	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3822005-3824689	Cluster_4965	Pocillopora_meandrina_HIv1___Sc0000019	3822005	3824689	2685	10600	2116	0.02188679245283019	-	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1554	74	10185	26	55	126	134	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3825490-3825910	Cluster_4966	Pocillopora_meandrina_HIv1___Sc0000019	3825490	3825910	421	482	185	0.2551867219917012	.	UGAUAACUAUGGACACUGGCC	78	33	287	138	16	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3825919-3826345	Cluster_4967	Pocillopora_meandrina_HIv1___Sc0000019	3825919	3826345	427	173	62	0.7109826589595376	.	CACCAAGCUCUUGAUCUCCGUACAACA	31	2	158	1	0	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3828011-3828678	Cluster_4968	Pocillopora_meandrina_HIv1___Sc0000019	3828011	3828678	668	1870	345	0.0021390374331550803	-	UACGGUGAAUUCGUCGACUACAACAUGGA	373	27	1815	8	7	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3829320-3830050	Cluster_4969	Pocillopora_meandrina_HIv1___Sc0000019	3829320	3830050	731	655	285	0.0030534351145038168	-	UGGUAGAAAUCCGUCUGAUACAAUCUUC	58	20	614	2	2	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3830253-3832893	Cluster_4970	Pocillopora_meandrina_HIv1___Sc0000019	3830253	3832893	2641	11352	2223	0.01004228329809725	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1266	38	11098	21	32	62	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3833266-3835567	Cluster_4971	Pocillopora_meandrina_HIv1___Sc0000019	3833266	3835567	2302	3811	1175	0.0002623983206507478	-	UCGCUUGCCUUACUUUUAAGCCAUACUGU	195	110	3604	12	28	19	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3835592-3836223	Cluster_4972	Pocillopora_meandrina_HIv1___Sc0000019	3835592	3836223	632	1058	361	0.0	-	UCGGUCAGAAAUGUUGAAAUACACUUUGA	56	6	1023	3	3	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3836384-3836797	Cluster_4973	Pocillopora_meandrina_HIv1___Sc0000019	3836384	3836797	414	157	86	0.0	-	UGGUAGACAAACUCAUUGACUGCGCUCUGC	22	6	140	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3836844-3838490	Cluster_4974	Pocillopora_meandrina_HIv1___Sc0000019	3836844	3838490	1647	6777	1194	0.0008853474988933156	-	UUGCAUCACUUUUAAACAAUGCUGUGGGU	535	76	6609	17	20	36	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3839036-3839953	Cluster_4975	Pocillopora_meandrina_HIv1___Sc0000019	3839036	3839953	918	2937	727	0.0006809669731018045	-	UGGAAAUGAUCCCGAUUGAACCUUACGUC	196	13	2855	13	11	26	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3840104-3841485	Cluster_4976	Pocillopora_meandrina_HIv1___Sc0000019	3840104	3841485	1382	48104	2560	0.0025153833361051055	-	UAGGAUCGAAAGUAACCAAUCAUUGAAUA	4656	337	46960	205	114	157	331	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3841533-3842664	Cluster_4977	Pocillopora_meandrina_HIv1___Sc0000019	3841533	3842664	1132	33634	2152	0.0028245228043051675	-	UUCGAUAUUUUGCUAGAAGUGUGAAAA	4923	265	32391	181	122	138	537	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3842842-3844850	Cluster_4978	Pocillopora_meandrina_HIv1___Sc0000019	3842842	3844850	2009	18976	1730	0.0008958684654300169	-	UUUAGGAUCGAAAGUAACCAAUCAUCGAGU	5705	414	17600	226	111	432	193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3845350-3845877	Cluster_4979	Pocillopora_meandrina_HIv1___Sc0000019	3845350	3845877	528	1580	271	0.0006329113924050633	-	UGAUUUAUGAUUGGCUGUUAGGCUGGCUC	199	16	1465	17	40	18	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3846212-3847405	Cluster_4980	Pocillopora_meandrina_HIv1___Sc0000019	3846212	3847405	1194	19420	1707	0.0009783728115345005	-	UAGGAUCGAAAGUAACCAAUCAUUGAAUA	2749	175	18675	123	60	92	295	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3848216-3848697	Cluster_4981	Pocillopora_meandrina_HIv1___Sc0000019	3848216	3848697	482	487	167	0.006160164271047228	-	UACAAAGCUCUCACGAAUUCACAAACAGA	54	2	483	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3849104-3850239	Cluster_4982	Pocillopora_meandrina_HIv1___Sc0000019	3849104	3850239	1136	1338	534	0.01046337817638266	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	83	16	1292	2	9	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3850360-3851238	Cluster_4983	Pocillopora_meandrina_HIv1___Sc0000019	3850360	3851238	879	888	388	0.016891891891891893	-	UGCUGAAACGAUUUUGACAGGUUGUCA	57	6	836	3	10	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3851407-3852097	Cluster_4984	Pocillopora_meandrina_HIv1___Sc0000019	3851407	3852097	691	1039	368	0.0028873917228103944	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	121	6	1018	1	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3852504-3853375	Cluster_4985	Pocillopora_meandrina_HIv1___Sc0000019	3852504	3853375	872	6663	667	0.0	-	UUUAGGAUCGAAAGUAACCAAUCAUUGAAUA	931	29	6532	16	17	25	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3920176-3920892	Cluster_4986	Pocillopora_meandrina_HIv1___Sc0000019	3920176	3920892	717	386	187	0.07253886010362694	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	34	8	356	4	4	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3923034-3923564	Cluster_4987	Pocillopora_meandrina_HIv1___Sc0000019	3923034	3923564	531	578	229	0.006920415224913495	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	27	1	569	0	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3923685-3924114	Cluster_4988	Pocillopora_meandrina_HIv1___Sc0000019	3923685	3924114	430	614	136	0.02768729641693811	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	126	1	603	3	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3930858-3932086	Cluster_4989	Pocillopora_meandrina_HIv1___Sc0000019	3930858	3932086	1229	3980	889	0.9474874371859296	+	UACUUUCUCUGUGACGGUUGACAUCAUG	277	52	3764	10	22	45	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3932170-3932597	Cluster_4990	Pocillopora_meandrina_HIv1___Sc0000019	3932170	3932597	428	129	49	0.9147286821705426	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	59	1	118	0	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3933467-3934738	Cluster_4991	Pocillopora_meandrina_HIv1___Sc0000019	3933467	3934738	1272	1248	502	0.9110576923076923	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	92	12	1183	5	3	13	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3969783-3970333	Cluster_4992	Pocillopora_meandrina_HIv1___Sc0000019	3969783	3970333	551	217	74	0.9216589861751152	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	32	2	195	1	1	13	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3970686-3971284	Cluster_4993	Pocillopora_meandrina_HIv1___Sc0000019	3970686	3971284	599	1495	264	0.8040133779264214	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	503	8	1416	2	6	17	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4422719-4423146	Cluster_4994	Pocillopora_meandrina_HIv1___Sc0000019	4422719	4423146	428	93	8	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	64	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4424090-4424495	Cluster_4995	Pocillopora_meandrina_HIv1___Sc0000019	4424090	4424495	406	103	48	0.32038834951456313	.	UGAAUGUUGCGAAGCUCUUCGUCCAAAAGA	14	1	93	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4626626-4627050	Cluster_4996	Pocillopora_meandrina_HIv1___Sc0000019	4626626	4627050	425	158	15	1.0	+	UGGUCUGAAGAAAAAAAAAAAAAAA	43	0	98	2	10	14	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4697498-4697931	Cluster_4997	Pocillopora_meandrina_HIv1___Sc0000019	4697498	4697931	434	411	91	0.024330900243309004	-	UCGAUUCCGCGAUGACUACAAUACGUUCUGU	98	2	407	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4747107-4747592	Cluster_4998	Pocillopora_meandrina_HIv1___Sc0000019	4747107	4747592	486	1088	248	0.4485294117647059	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	245	75	702	15	37	110	149	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4979222-4979641	Cluster_4999	Pocillopora_meandrina_HIv1___Sc0000019	4979222	4979641	420	253	178	0.4782608695652174	.	UACCGAACUUAGCAAACACA	15	120	10	76	29	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4988931-4989354	Cluster_5000	Pocillopora_meandrina_HIv1___Sc0000019	4988931	4989354	424	160	85	0.7375	.	AACACUACUACCGUGAGACUGAAG	19	4	100	4	5	12	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5004636-5005059	Cluster_5001	Pocillopora_meandrina_HIv1___Sc0000019	5004636	5005059	424	164	90	0.07317073170731707	-	UAAAUCUUGUUGCAGGUCCGUGAUCGAUA	16	1	158	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5181281-5181698	Cluster_5002	Pocillopora_meandrina_HIv1___Sc0000019	5181281	5181698	418	108	2	0.9907407407407407	+	UUGAACUCGACCCUGUCG	107	107	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5259201-5259623	Cluster_5003	Pocillopora_meandrina_HIv1___Sc0000019	5259201	5259623	423	233	156	0.9914163090128756	+	GACGGAAUUGCUAGUGUUAAACACGAAAU	13	41	123	14	26	20	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5416500-5416927	Cluster_5004	Pocillopora_meandrina_HIv1___Sc0000019	5416500	5416927	428	183	69	0.01092896174863388	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	36	1	173	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5428082-5428745	Cluster_5005	Pocillopora_meandrina_HIv1___Sc0000019	5428082	5428745	664	594	235	0.33164983164983164	.	UAAGACAACAUCUUUUAAAGAGCCUGG	44	9	541	5	12	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5430016-5430794	Cluster_5006	Pocillopora_meandrina_HIv1___Sc0000019	5430016	5430794	779	980	196	0.37244897959183676	.	UUCUACCCAUCAACUGUGCGAUUUCAAGA	110	19	923	8	9	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5434354-5434782	Cluster_5007	Pocillopora_meandrina_HIv1___Sc0000019	5434354	5434782	429	123	33	0.032520325203252036	-	UCCGUGAUUCAGAUUAAAAAUUCAGAUGA	22	0	117	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5435341-5435770	Cluster_5008	Pocillopora_meandrina_HIv1___Sc0000019	5435341	5435770	430	144	54	0.0	-	UGUUCAAUACGUGGGCUGUCUUAUUCAAGC	39	0	141	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5437576-5438003	Cluster_5009	Pocillopora_meandrina_HIv1___Sc0000019	5437576	5438003	428	83	31	0.0	-	UCCACGUGUAAAUGAUCGAGUCUGUAUCAC	30	1	82	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5443093-5443583	Cluster_5010	Pocillopora_meandrina_HIv1___Sc0000019	5443093	5443583	491	241	90	0.004149377593360996	-	UAGGGAUAAUCGGUCUUCUAAUGUACUGGA	37	14	224	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5444458-5444886	Cluster_5011	Pocillopora_meandrina_HIv1___Sc0000019	5444458	5444886	429	314	48	0.0	-	UAUAGAACUCUUUAGGUUGUGAGAUGGAG	117	6	226	78	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5446707-5447270	Cluster_5012	Pocillopora_meandrina_HIv1___Sc0000019	5446707	5447270	564	797	219	0.0	-	UCUUGCUUUGGCUGAGACGAGAGACUGUGU	60	2	781	3	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5447713-5448138	Cluster_5013	Pocillopora_meandrina_HIv1___Sc0000019	5447713	5448138	426	148	74	0.0	-	UGAGUAGAUCACUCUGGGACGUCCUCGCC	17	4	135	3	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5448830-5449258	Cluster_5014	Pocillopora_meandrina_HIv1___Sc0000019	5448830	5449258	429	305	77	0.0	-	UGUAAAGAGCUACUCUGGAAACUUGAAGC	75	4	299	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5458238-5458661	Cluster_5015	Pocillopora_meandrina_HIv1___Sc0000019	5458238	5458661	424	126	62	0.015873015873015872	-	UGAUCUGAUCUUGGCGACAUUAUCCUC	21	4	119	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5460529-5460955	Cluster_5016	Pocillopora_meandrina_HIv1___Sc0000019	5460529	5460955	427	108	35	0.0	-	UCCGACUGGGUCUCUCUGUAUUUGAGAAGC	19	1	104	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5467431-5468262	Cluster_5017	Pocillopora_meandrina_HIv1___Sc0000019	5467431	5468262	832	484	183	0.20454545454545456	.	AUCCCUUUUAGUAACCUUAUUGAA	78	24	334	7	8	16	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5468365-5469128	Cluster_5018	Pocillopora_meandrina_HIv1___Sc0000019	5468365	5469128	764	2649	460	0.013590033975084938	-	UCGUUUCUCAUCUACCUUGUGUUCUUG	194	15	2539	2	35	27	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5474494-5474921	Cluster_5019	Pocillopora_meandrina_HIv1___Sc0000019	5474494	5474921	428	129	47	0.0	-	UGAGUGUAUUCUUGAACUGUUUUCCAAC	49	0	127	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5477906-5478336	Cluster_5020	Pocillopora_meandrina_HIv1___Sc0000019	5477906	5478336	431	195	71	0.010256410256410256	-	UUCAAUGUGAAAUAGUUUAUUGAGGAAUGGU	51	0	190	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5478779-5479203	Cluster_5021	Pocillopora_meandrina_HIv1___Sc0000019	5478779	5479203	425	218	98	0.0	-	UGUUUACAGAGGUUUGGGUUGAUGAUCUU	17	1	210	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5482065-5482491	Cluster_5022	Pocillopora_meandrina_HIv1___Sc0000019	5482065	5482491	427	202	111	0.034653465346534656	-	UGAAAGUGUGCACAAGUAUUUCUGCUG	14	4	191	0	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5482975-5483420	Cluster_5023	Pocillopora_meandrina_HIv1___Sc0000019	5482975	5483420	446	868	169	0.00576036866359447	-	UAACUCUGAUUGCUUAAUCCCUCACUGAUG	153	3	848	2	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5483634-5485029	Cluster_5024	Pocillopora_meandrina_HIv1___Sc0000019	5483634	5485029	1396	4349	1254	0.15635778339848241	-	UUAUCUCAAUCUUCGGUAGCUUCGCUUG	145	258	3728	26	66	129	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5485678-5486184	Cluster_5025	Pocillopora_meandrina_HIv1___Sc0000019	5485678	5486184	507	348	156	0.034482758620689655	-	UAUCACACUUGUGCUGCCAUGCUGGACA	53	0	326	0	3	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5486851-5489306	Cluster_5026	Pocillopora_meandrina_HIv1___Sc0000019	5486851	5489306	2456	12093	2974	0.037873149756057226	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	507	127	10988	56	102	193	627	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5489974-5490852	Cluster_5027	Pocillopora_meandrina_HIv1___Sc0000019	5489974	5490852	879	895	438	0.20893854748603352	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	94	19	777	19	21	14	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5490882-5491827	Cluster_5028	Pocillopora_meandrina_HIv1___Sc0000019	5490882	5491827	946	752	308	0.08643617021276596	-	UAUUCCAAUCUCCUCUGAAACUCUUCCGGA	74	6	684	3	5	28	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5492605-5493020	Cluster_5029	Pocillopora_meandrina_HIv1___Sc0000019	5492605	5493020	416	156	99	0.08333333333333333	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	17	1	146	3	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5493357-5493791	Cluster_5030	Pocillopora_meandrina_HIv1___Sc0000019	5493357	5493791	435	428	175	0.03271028037383177	-	UCUGUUCUGACUUGAUAGGACCUUAUGUC	46	5	411	4	1	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5494121-5494553	Cluster_5031	Pocillopora_meandrina_HIv1___Sc0000019	5494121	5494553	433	910	263	0.4197802197802198	.	ACCCAGUUGAAGAACGAGAGACGU	132	6	577	3	10	71	243	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5495048-5495690	Cluster_5032	Pocillopora_meandrina_HIv1___Sc0000019	5495048	5495690	643	2325	458	0.024516129032258065	-	UGUUCCUUGAAUUCUGCGUGCACAAAGC	336	20	2207	15	17	19	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5495833-5498649	Cluster_5033	Pocillopora_meandrina_HIv1___Sc0000019	5495833	5498649	2817	6496	1943	0.07635467980295567	-	UGUUUGCAGUUAUGAAUGAAUCUCUUUAGC	509	111	6026	47	42	100	170	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5498925-5499650	Cluster_5034	Pocillopora_meandrina_HIv1___Sc0000019	5498925	5499650	726	2431	362	0.015220074043603456	-	UGACAAAUUUUCAUGGCUCCUUUCACAGA	474	58	2261	14	21	21	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5500882-5501311	Cluster_5035	Pocillopora_meandrina_HIv1___Sc0000019	5500882	5501311	430	269	79	0.022304832713754646	-	UGGUCUUGAAAUAUGGUGACACCCAAUCUG	70	7	254	4	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5511087-5512628	Cluster_5036	Pocillopora_meandrina_HIv1___Sc0000019	5511087	5512628	1542	1544	331	0.11528497409326424	-	UCAGUGUUUUGUAGUCCAAUGAAACUAAGC	311	25	1447	16	11	14	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5514558-5514964	Cluster_5037	Pocillopora_meandrina_HIv1___Sc0000019	5514558	5514964	407	90	28	0.044444444444444446	-	UAUUAUCGAUAUAGAUUUCCAUUGAAGU	37	2	85	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5515544-5516386	Cluster_5038	Pocillopora_meandrina_HIv1___Sc0000019	5515544	5516386	843	4676	514	0.00641573994867408	-	UGAACUGUUGAACCACAAGUGAAGAUAC	421	116	4371	26	118	27	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5518101-5518533	Cluster_5039	Pocillopora_meandrina_HIv1___Sc0000019	5518101	5518533	433	301	117	0.009966777408637873	-	UCACAUGUAAACACCUUGCCAUUAUCGAUC	67	8	281	1	6	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5519624-5520293	Cluster_5040	Pocillopora_meandrina_HIv1___Sc0000019	5519624	5520293	670	813	183	0.025830258302583026	-	UCGACGUCGAUAUCAACAUUCUUAAUGU	255	5	784	3	1	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5528716-5529214	Cluster_5041	Pocillopora_meandrina_HIv1___Sc0000019	5528716	5529214	499	211	73	0.004739336492890996	-	UGGGCGAUUUGCAAUUCAUGGAAAAAUGU	43	3	205	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5530160-5530595	Cluster_5042	Pocillopora_meandrina_HIv1___Sc0000019	5530160	5530595	436	230	76	0.3217391304347826	.	AAGCUCUUUAAGAUCAUUGAACA	40	3	162	0	8	45	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5531747-5532717	Cluster_5043	Pocillopora_meandrina_HIv1___Sc0000019	5531747	5532717	971	855	181	0.0023391812865497076	-	UGAGCAAUGAAUUCUUCAAACACAAAACAGA	197	11	827	3	5	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5537318-5538414	Cluster_5044	Pocillopora_meandrina_HIv1___Sc0000019	5537318	5538414	1097	697	301	0.1133428981348637	-	UCGGCUUUGAUUCCUGGCAGCUUAUCAA	76	14	619	4	3	9	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5538438-5538865	Cluster_5045	Pocillopora_meandrina_HIv1___Sc0000019	5538438	5538865	428	320	121	0.084375	-	UACUUUGACAAGAACUAUAGGAUGGCAA	54	5	296	2	5	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5538980-5539390	Cluster_5046	Pocillopora_meandrina_HIv1___Sc0000019	5538980	5539390	411	161	80	0.16149068322981366	-	UCCAUUCUAUACAGCUCUUCACAAUCGUU	16	4	134	0	1	2	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5540318-5540983	Cluster_5047	Pocillopora_meandrina_HIv1___Sc0000019	5540318	5540983	666	489	130	0.05725971370143149	-	UCUUGUACGUUGCUUAGAAGAUUCAC	146	14	423	2	2	28	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5541815-5542236	Cluster_5048	Pocillopora_meandrina_HIv1___Sc0000019	5541815	5542236	422	141	57	0.0	-	UAAAACGAUAUUGCUGACAGAAAAAUAACA	30	1	139	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5543716-5544953	Cluster_5049	Pocillopora_meandrina_HIv1___Sc0000019	5543716	5544953	1238	1051	304	0.021883920076117985	-	UGAACGACUCAAAAUCUCCACUGUUGAAAGG	203	5	1022	4	6	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5546262-5547320	Cluster_5050	Pocillopora_meandrina_HIv1___Sc0000019	5546262	5547320	1059	1985	675	0.10428211586901763	-	UACGCUGAAAUUUCUGCUUGGGU	119	59	1582	36	26	197	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5548045-5548474	Cluster_5051	Pocillopora_meandrina_HIv1___Sc0000019	5548045	5548474	430	127	53	0.0	-	UUGGUCUUCCUGUAAUGUGCUGAUUGUGGC	19	1	125	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5549965-5550394	Cluster_5052	Pocillopora_meandrina_HIv1___Sc0000019	5549965	5550394	430	179	46	0.0	-	UGGUUUCUGAAAUUUUGAAUGUGGAAGUUC	62	2	167	2	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5554945-5555364	Cluster_5053	Pocillopora_meandrina_HIv1___Sc0000019	5554945	5555364	420	453	84	0.0	-	AAAUCUUACACUCUUUGCCA	141	283	167	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5555767-5556175	Cluster_5054	Pocillopora_meandrina_HIv1___Sc0000019	5555767	5556175	409	198	86	0.0	-	UGAGUCCUCGUUUUAGCAGCAUGUACUGUU	26	3	188	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5556470-5556917	Cluster_5055	Pocillopora_meandrina_HIv1___Sc0000019	5556470	5556917	448	655	227	0.0	-	UGUCCAGGUCUAGUUGUUCUCCUUCGAUU	68	6	629	3	5	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5558976-5559395	Cluster_5056	Pocillopora_meandrina_HIv1___Sc0000019	5558976	5559395	420	188	96	0.10106382978723404	-	UUCUAAAGCUAGAGAACUGACUCAACUUC	13	8	151	7	1	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5562928-5565476	Cluster_5057	Pocillopora_meandrina_HIv1___Sc0000019	5562928	5565476	2549	6659	2079	0.08725033788857185	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	300	88	6021	43	77	206	224	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5565543-5565954	Cluster_5058	Pocillopora_meandrina_HIv1___Sc0000019	5565543	5565954	412	116	72	0.02586206896551724	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	10	2	104	2	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5960842-5961269	Cluster_5059	Pocillopora_meandrina_HIv1___Sc0000019	5960842	5961269	428	185	100	0.12972972972972974	-	UCUGACUUGUAGACUUUGGUGAACUGCA	24	1	170	0	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6018847-6019274	Cluster_5060	Pocillopora_meandrina_HIv1___Sc0000019	6018847	6019274	428	191	85	0.04712041884816754	-	UCUGACUUGUAGACUUUGGUGAACUGCA	34	1	185	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6044310-6045174	Cluster_5061	Pocillopora_meandrina_HIv1___Sc0000019	6044310	6045174	865	506	264	0.9051383399209486	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	17	5	471	3	6	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6067663-6068288	Cluster_5062	Pocillopora_meandrina_HIv1___Sc0000019	6067663	6068288	626	469	166	0.04051172707889126	-	UCUGACUUGUAGACUUUGGUGAACUGCA	60	0	460	1	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6300765-6301190	Cluster_5063	Pocillopora_meandrina_HIv1___Sc0000019	6300765	6301190	426	85	28	0.0	-	UCCGAUUUAAAAGAUUCUUUGUUUGU	14	0	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6301471-6302094	Cluster_5064	Pocillopora_meandrina_HIv1___Sc0000019	6301471	6302094	624	1654	227	0.007859733978234583	-	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	446	0	1641	2	0	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6393114-6393567	Cluster_5065	Pocillopora_meandrina_HIv1___Sc0000019	6393114	6393567	454	261	100	0.9846743295019157	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	45	3	250	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6393721-6396888	Cluster_5066	Pocillopora_meandrina_HIv1___Sc0000019	6393721	6396888	3168	5261	1762	0.9190268009884053	+	UGUACAACCAUCCGAUACUCUUGU	680	47	3849	16	30	124	1195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6397091-6398342	Cluster_5067	Pocillopora_meandrina_HIv1___Sc0000019	6397091	6398342	1252	1492	690	0.8840482573726541	+	UUGGAUACAUGAUCAGAUUCGUAACA	53	51	1338	17	19	15	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6398638-6399065	Cluster_5068	Pocillopora_meandrina_HIv1___Sc0000019	6398638	6399065	428	329	182	0.8206686930091185	+	UGUUGUUCCAGGUAGUAUAAGCAAUCUG	17	4	295	5	3	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6399266-6400373	Cluster_5069	Pocillopora_meandrina_HIv1___Sc0000019	6399266	6400373	1108	8327	1146	0.8820703734838478	+	UACAAUAACCUCUGAUUUCACUAAAUG	1614	33	7563	39	77	257	358	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6411186-6411623	Cluster_5070	Pocillopora_meandrina_HIv1___Sc0000019	6411186	6411623	438	529	136	0.03213610586011342	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	133	5	516	1	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6419454-6419866	Cluster_5071	Pocillopora_meandrina_HIv1___Sc0000019	6419454	6419866	413	73	24	0.9726027397260274	+	UAAUCGUUGGCUUUUUCUCGAGACGUGAGC	35	1	71	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6423926-6424355	Cluster_5072	Pocillopora_meandrina_HIv1___Sc0000019	6423926	6424355	430	105	20	0.009523809523809525	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	43	0	102	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6434231-6434651	Cluster_5073	Pocillopora_meandrina_HIv1___Sc0000019	6434231	6434651	421	173	95	0.9710982658959537	+	UGUAUUACUGGGCUGCCUAUCUUCAUUGGA	15	4	165	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6437833-6439058	Cluster_5074	Pocillopora_meandrina_HIv1___Sc0000019	6437833	6439058	1226	7546	1364	0.05963424330771269	-	UGUUUUGUUUCUGAUUAACCUUGUGU	602	63	7104	37	37	102	203	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6439915-6441044	Cluster_5075	Pocillopora_meandrina_HIv1___Sc0000019	6439915	6441044	1130	5255	802	0.9680304471931493	+	UGCUUGUAAUGUAAUAUCUCCUGGAGG	557	19	4951	23	29	112	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6441090-6441644	Cluster_5076	Pocillopora_meandrina_HIv1___Sc0000019	6441090	6441644	555	2919	376	0.986296676944159	+	UAUAUCCUUUUAUUAAGGGUUUGGCGGUAG	998	11	2868	1	5	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6446818-6447245	Cluster_5077	Pocillopora_meandrina_HIv1___Sc0000019	6446818	6447245	428	171	40	0.04093567251461988	-	UCAAAUCGAUUCUGAAUGUUCUCUUUUA	49	0	168	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6457181-6458370	Cluster_5078	Pocillopora_meandrina_HIv1___Sc0000019	6457181	6458370	1190	1376	380	0.8808139534883721	+	UCAUCUCUAUUAUUGGGUCGCUUGUAGU	253	7	1325	7	8	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6462929-6463922	Cluster_5079	Pocillopora_meandrina_HIv1___Sc0000019	6462929	6463922	994	7286	942	0.9636288772989294	+	UGUUCAACUCUUUCAAUGGCAGCUGUG	673	98	6894	31	52	92	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6490502-6491050	Cluster_5080	Pocillopora_meandrina_HIv1___Sc0000019	6490502	6491050	549	1806	217	0.009413067552602437	-	UGUUCAAAAUUAUCGUCUACGUAUGUGU	129	3	1723	4	11	2	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6651476-6651886	Cluster_5081	Pocillopora_meandrina_HIv1___Sc0000019	6651476	6651886	411	197	120	0.07614213197969544	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	25	6	183	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6653728-6654780	Cluster_5082	Pocillopora_meandrina_HIv1___Sc0000019	6653728	6654780	1053	723	339	0.7842323651452282	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	29	7	679	3	2	15	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6655041-6655470	Cluster_5083	Pocillopora_meandrina_HIv1___Sc0000019	6655041	6655470	430	624	213	0.907051282051282	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	79	3	526	8	3	10	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6676652-6677079	Cluster_5084	Pocillopora_meandrina_HIv1___Sc0000019	6676652	6677079	428	88	22	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	0	87	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6679746-6680158	Cluster_5085	Pocillopora_meandrina_HIv1___Sc0000019	6679746	6680158	413	194	116	0.8969072164948454	+	UACUGAUAGUGAAACUGCUCCUUGAACC	12	4	183	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6680180-6680610	Cluster_5086	Pocillopora_meandrina_HIv1___Sc0000019	6680180	6680610	431	320	160	0.934375	+	UGAUAACUGUACUCUUGAAAUUCAUCGAU	18	2	297	1	2	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:130515-130932	Cluster_5087	Pocillopora_meandrina_HIv1___Sc0000020	130515	130932	418	73	11	0.0	-	GCUGGCUGACUUUGGUGG	22	72	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:312654-314365	Cluster_5088	Pocillopora_meandrina_HIv1___Sc0000020	312654	314365	1712	4267	1330	0.10030466369814858	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	369	43	3975	32	33	53	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:314372-314799	Cluster_5089	Pocillopora_meandrina_HIv1___Sc0000020	314372	314799	428	358	157	0.12849162011173185	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	50	5	336	0	2	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:314917-315343	Cluster_5090	Pocillopora_meandrina_HIv1___Sc0000020	314917	315343	427	204	105	0.0784313725490196	-	UGAACUUCUCGGCUCCAAACACUAUGG	52	1	191	1	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:315358-315790	Cluster_5091	Pocillopora_meandrina_HIv1___Sc0000020	315358	315790	433	498	202	0.0642570281124498	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	55	4	468	4	1	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:316076-317295	Cluster_5092	Pocillopora_meandrina_HIv1___Sc0000020	316076	317295	1220	1250	472	0.0528	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	171	27	1133	2	13	25	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:324378-324812	Cluster_5093	Pocillopora_meandrina_HIv1___Sc0000020	324378	324812	435	174	64	0.028735632183908046	-	UGUAUUCUUUUAUAACUCUUAGGUUGUGAC	30	2	168	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:336428-336854	Cluster_5094	Pocillopora_meandrina_HIv1___Sc0000020	336428	336854	427	136	71	0.014705882352941176	-	UGACGUGAAAGUUUCUGGACUUGUUUCGA	13	0	129	1	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:338038-338466	Cluster_5095	Pocillopora_meandrina_HIv1___Sc0000020	338038	338466	429	292	143	0.1095890410958904	-	UCGGAACAACGGUCGGUCUUCAGGCU	16	6	255	0	1	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:341600-342016	Cluster_5096	Pocillopora_meandrina_HIv1___Sc0000020	341600	342016	417	109	61	0.0	-	UGACGAUUUUCGCGGCUCGAUUUUGU	13	0	108	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:343986-344386	Cluster_5097	Pocillopora_meandrina_HIv1___Sc0000020	343986	344386	401	208	101	0.125	-	UGGGAAAUUAUCUCUUGGACCUUUCGCC	23	1	186	0	1	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:347036-347464	Cluster_5098	Pocillopora_meandrina_HIv1___Sc0000020	347036	347464	429	344	174	0.2703488372093023	.	UGUGAUUUCUUUGUCUGGCGAAUUUCUCC	33	7	320	2	3	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:351542-351968	Cluster_5099	Pocillopora_meandrina_HIv1___Sc0000020	351542	351968	427	219	108	0.0045662100456621	-	UUAGAUCGUUCAUGGUUGCAUUCGUGA	28	1	215	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:361830-362341	Cluster_5100	Pocillopora_meandrina_HIv1___Sc0000020	361830	362341	512	1205	202	0.014107883817427386	-	UGAAACUGUUGCAUUUGAUUCUGUUGCUGC	318	0	1190	0	0	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:380637-381078	Cluster_5101	Pocillopora_meandrina_HIv1___Sc0000020	380637	381078	442	914	144	0.20350109409190373	.	UGAACUUGAACUAUUUGCUGGAGACGA	231	5	731	50	17	11	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:382358-382785	Cluster_5102	Pocillopora_meandrina_HIv1___Sc0000020	382358	382785	428	188	69	0.015957446808510637	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	5	177	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:395351-395775	Cluster_5103	Pocillopora_meandrina_HIv1___Sc0000020	395351	395775	425	155	54	0.6387096774193548	.	UUGUCUUGUCAAACAGACCCUGGAGAUA	14	2	124	0	2	1	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:775335-775932	Cluster_5104	Pocillopora_meandrina_HIv1___Sc0000020	775335	775932	598	589	270	0.0730050933786078	-	UUACCGGAGUGUUCUCUCGACGCAGUUUC	29	2	558	1	2	19	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:775949-776378	Cluster_5105	Pocillopora_meandrina_HIv1___Sc0000020	775949	776378	430	359	117	0.019498607242339833	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	47	1	346	0	5	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:857382-857811	Cluster_5106	Pocillopora_meandrina_HIv1___Sc0000020	857382	857811	430	322	50	0.0	-	ACAAAGAACGAAUUGAGCCGACUUCAUGAU	76	3	310	3	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:859608-860032	Cluster_5107	Pocillopora_meandrina_HIv1___Sc0000020	859608	860032	425	84	24	0.0	-	UGGUAGAGCCAGUGAGGAAGCAGCUAAAG	21	2	73	3	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:869363-870043	Cluster_5108	Pocillopora_meandrina_HIv1___Sc0000020	869363	870043	681	1452	175	0.048209366391184574	-	UUCUGCUAUAUUGUGAAAUAACCUCAACAUU	291	31	1369	9	15	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1050285-1050708	Cluster_5109	Pocillopora_meandrina_HIv1___Sc0000020	1050285	1050708	424	106	44	0.07547169811320754	-	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	18	0	102	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1057769-1058237	Cluster_5110	Pocillopora_meandrina_HIv1___Sc0000020	1057769	1058237	469	468	190	0.17735042735042736	-	UUCCUCAUCUGAAGACUCUUCUAGAAUC	33	12	434	2	13	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1058725-1060128	Cluster_5111	Pocillopora_meandrina_HIv1___Sc0000020	1058725	1060128	1404	10718	1547	0.03844000746407912	-	UGAAUCACUGUCAUCAAAACCAUGAAC	1222	92	10161	52	90	129	194	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1061581-1062330	Cluster_5112	Pocillopora_meandrina_HIv1___Sc0000020	1061581	1062330	750	6681	722	0.27316270019458166	.	UAAGAAGAGGAAAAUUUACAUGUUUGA	737	56	6035	18	19	445	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1142046-1142571	Cluster_5113	Pocillopora_meandrina_HIv1___Sc0000020	1142046	1142571	526	376	84	0.8670212765957447	+	UGACUUGAUUUUUUACGGCAUUUUGUAUC	182	5	344	5	6	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1162644-1163073	Cluster_5114	Pocillopora_meandrina_HIv1___Sc0000020	1162644	1163073	430	179	48	1.0	+	UGUGCCAAAGAUUUAGAACGAAAGAACGA	43	0	174	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1409826-1410256	Cluster_5115	Pocillopora_meandrina_HIv1___Sc0000020	1409826	1410256	431	234	64	0.02564102564102564	-	UGUGUGACUUUGUAUGUAUAUUGAGCGU	40	1	230	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1424547-1424963	Cluster_5116	Pocillopora_meandrina_HIv1___Sc0000020	1424547	1424963	417	73	21	1.0	+	AGUUGGAAGAAAAUCAAGAGCCCGUG	17	3	61	0	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1425148-1425570	Cluster_5117	Pocillopora_meandrina_HIv1___Sc0000020	1425148	1425570	423	79	25	1.0	+	UGCCAAGCGAUGGAAAGGGAGGAAGAGA	26	2	67	0	0	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1665283-1665721	Cluster_5118	Pocillopora_meandrina_HIv1___Sc0000020	1665283	1665721	439	548	138	0.9653284671532847	+	UGCGAUUUCGUUCCUCGUCCUUGAUGA	67	0	531	0	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1806698-1807115	Cluster_5119	Pocillopora_meandrina_HIv1___Sc0000020	1806698	1807115	418	118	35	0.01694915254237288	-	UUUGACAACUUUUGACGA	73	87	13	5	6	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2018664-2019081	Cluster_5120	Pocillopora_meandrina_HIv1___Sc0000020	2018664	2019081	418	120	73	0.008333333333333333	-	GGAAGAACGAAAGCGUUAGACCUGACU	12	27	71	3	5	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2137330-2138632	Cluster_5121	Pocillopora_meandrina_HIv1___Sc0000020	2137330	2138632	1303	15545	2414	0.09642972016725636	-	UCGAAUGCAUAAGUUUACUGGGGCUUGACC	2020	87	14802	45	71	228	312	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2139966-2140397	Cluster_5122	Pocillopora_meandrina_HIv1___Sc0000020	2139966	2140397	432	662	107	0.93202416918429	+	UGUAUCUAGCUCUCUCUGAACCACAGG	180	3	603	1	2	1	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2140982-2141636	Cluster_5123	Pocillopora_meandrina_HIv1___Sc0000020	2140982	2141636	655	3250	495	0.06523076923076923	-	UACGAUGUGAUGUCUGAUCUUGACCCCGAU	586	15	3042	4	19	73	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2154149-2157219	Cluster_5124	Pocillopora_meandrina_HIv1___Sc0000020	2154149	2157219	3071	6589	2178	0.013659128851115495	-	UGAGACUUAAUUUCACACUACAGGAAUUGU	217	78	6278	33	37	80	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2157969-2158803	Cluster_5125	Pocillopora_meandrina_HIv1___Sc0000020	2157969	2158803	835	966	404	0.002070393374741201	-	UGAUUAAGAUAAGUUCUCUCAUUGGGCAUU	31	31	891	11	13	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2159004-2159497	Cluster_5126	Pocillopora_meandrina_HIv1___Sc0000020	2159004	2159497	494	348	135	0.008620689655172414	-	UAAAGCUGUGUCCACUAUAUCUGAGUAUU	28	3	334	0	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2162622-2163356	Cluster_5127	Pocillopora_meandrina_HIv1___Sc0000020	2162622	2163356	735	4293	264	0.005124621476822734	-	UGUUCCGUUAAUGACAUAAACCUUAGUCCUU	820	15	4183	6	3	9	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2165991-2166419	Cluster_5128	Pocillopora_meandrina_HIv1___Sc0000020	2165991	2166419	429	287	102	0.0	-	UAAUCUUGUCUUCACUGAACUCUAGGCA	56	4	277	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2167227-2167640	Cluster_5129	Pocillopora_meandrina_HIv1___Sc0000020	2167227	2167640	414	208	98	0.0	-	UGUAAACUUCCGCAUCAGCUGUAUUUCAAC	23	6	197	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2167717-2168861	Cluster_5130	Pocillopora_meandrina_HIv1___Sc0000020	2167717	2168861	1145	747	218	0.008032128514056224	-	UGAGAUCUUUAACAUUGCUGAGAUGAUAU	128	14	716	1	6	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2171481-2173323	Cluster_5131	Pocillopora_meandrina_HIv1___Sc0000020	2171481	2173323	1843	10171	1740	0.1434470553534559	-	UACUUGUCGAAGUCCUGGCCCUCUAGCC	707	78	9329	42	133	190	399	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2180250-2180666	Cluster_5132	Pocillopora_meandrina_HIv1___Sc0000020	2180250	2180666	417	220	125	0.0	-	UGAAACGCAUCGUCACAUUGUAUAACUGA	14	0	218	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2183526-2183955	Cluster_5133	Pocillopora_meandrina_HIv1___Sc0000020	2183526	2183955	430	179	71	0.0	-	UCCGAUCAAAGAAACAUCAAAGUGCUCGC	22	0	174	4	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2184200-2185184	Cluster_5134	Pocillopora_meandrina_HIv1___Sc0000020	2184200	2185184	985	1118	585	0.01073345259391771	-	CAUGUCUAAGUAUAAGCACU	44	476	348	96	72	69	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2187009-2187437	Cluster_5135	Pocillopora_meandrina_HIv1___Sc0000020	2187009	2187437	429	267	104	0.00749063670411985	-	UGUUGCUCUAAAUGUAUCUUUGAUGUAUA	42	1	262	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2187597-2188625	Cluster_5136	Pocillopora_meandrina_HIv1___Sc0000020	2187597	2188625	1029	1213	274	0.005770816158285243	-	UGUUAGAAAUUCCAGAAACUGCUUGUGUGC	282	7	1185	2	2	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2193899-2194735	Cluster_5137	Pocillopora_meandrina_HIv1___Sc0000020	2193899	2194735	837	6856	1367	0.004667444574095682	-	CUUAGAUGUUCUGGGCCGCACGCGCGCUA	257	1938	3340	453	337	341	447	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2196736-2197517	Cluster_5138	Pocillopora_meandrina_HIv1___Sc0000020	2196736	2197517	782	587	340	0.0	-	UAGGAUCUGAUUUCAAUCCAUUUGCUGUC	30	3	557	5	4	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2197561-2199023	Cluster_5139	Pocillopora_meandrina_HIv1___Sc0000020	2197561	2199023	1463	4318	1034	0.009031959240389069	-	UACAAAGUCAUGUGCCACCUCUGCAACA	454	39	4194	8	5	28	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2199973-2200510	Cluster_5140	Pocillopora_meandrina_HIv1___Sc0000020	2199973	2200510	538	520	222	0.0	-	UCUUUUAGUAUCGCCAACUGUGGCUUCGGA	39	4	501	6	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2200810-2201288	Cluster_5141	Pocillopora_meandrina_HIv1___Sc0000020	2200810	2201288	479	1043	279	0.0009587727708533077	-	UGUUGUCAUAUUGUUUCUCCAUUCAUC	131	3	993	2	5	25	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2201494-2202081	Cluster_5142	Pocillopora_meandrina_HIv1___Sc0000020	2201494	2202081	588	337	188	0.0	-	UGAUUCUGGCUUAAGUGAAGUGACGCA	17	4	313	4	9	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2202498-2202922	Cluster_5143	Pocillopora_meandrina_HIv1___Sc0000020	2202498	2202922	425	137	70	0.0	-	UGCACUGUAUCGAUACCACUUAUAGGGAAA	23	0	133	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2203171-2204060	Cluster_5144	Pocillopora_meandrina_HIv1___Sc0000020	2203171	2204060	890	816	325	0.0	-	UGAUAUUAUACAGAUCUUCUGCCUGCAUAGC	93	18	773	12	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2204386-2206467	Cluster_5145	Pocillopora_meandrina_HIv1___Sc0000020	2204386	2206467	2082	16313	1904	0.049898853674983146	-	UCGGUAUAGCUUUCAAAACUGUUGUCACU	2346	421	14208	73	161	801	649	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2206824-2208625	Cluster_5146	Pocillopora_meandrina_HIv1___Sc0000020	2206824	2208625	1802	2894	966	0.09398756046993781	-	UCAUAAACAACGCUCUGAUCGCCAUUAGG	108	26	2682	11	27	76	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2208662-2209312	Cluster_5147	Pocillopora_meandrina_HIv1___Sc0000020	2208662	2209312	651	1298	489	0.10785824345146379	-	UGCUUCUCAAUUUCGUCUGUUGUCAGGG	95	14	1195	8	7	29	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2210291-2210722	Cluster_5148	Pocillopora_meandrina_HIv1___Sc0000020	2210291	2210722	432	429	90	0.07459207459207459	-	UAUGCUAUUAUUCUGUUUCCGACACACU	85	3	420	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2213520-2214635	Cluster_5149	Pocillopora_meandrina_HIv1___Sc0000020	2213520	2214635	1116	1394	409	0.013629842180774749	-	UGACAAUCAUGCUGCUAAGUUCCUACGC	150	40	1314	2	16	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2215350-2215821	Cluster_5150	Pocillopora_meandrina_HIv1___Sc0000020	2215350	2215821	472	564	183	0.0	-	UAAUUUUGGAUGUGAGCUUCCCGAUAGCC	51	5	548	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2215844-2216273	Cluster_5151	Pocillopora_meandrina_HIv1___Sc0000020	2215844	2216273	430	320	131	0.0	-	UUGUGUCACUAACAAGGGACCUAGAAGAGU	49	2	314	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2218309-2218724	Cluster_5152	Pocillopora_meandrina_HIv1___Sc0000020	2218309	2218724	416	164	80	0.07317073170731707	-	UGUAUUAUUCUGUACCUUCUUCUUGAUAGA	37	12	152	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2219673-2220100	Cluster_5153	Pocillopora_meandrina_HIv1___Sc0000020	2219673	2220100	428	86	31	0.011627906976744186	-	UGACUUAACUGAACUUUCACCUGCAGUGGA	42	0	81	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2222506-2223395	Cluster_5154	Pocillopora_meandrina_HIv1___Sc0000020	2222506	2223395	890	3872	594	0.2732438016528926	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	764	84	3255	40	25	104	364	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2223405-2224021	Cluster_5155	Pocillopora_meandrina_HIv1___Sc0000020	2223405	2224021	617	2458	365	0.13588283157038242	-	UUACAUGAUUUUUAUAGGAGCUGAAUAA	827	9	2310	2	7	28	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2247886-2248411	Cluster_5156	Pocillopora_meandrina_HIv1___Sc0000020	2247886	2248411	526	905	198	0.45193370165745855	.	UGGGUUCUCGAUCACGUCUAAAUACACG	83	7	863	3	5	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2257511-2258054	Cluster_5157	Pocillopora_meandrina_HIv1___Sc0000020	2257511	2258054	544	503	129	0.05765407554671968	-	UGAAUAACCACUGAGACGUUCGGUAGA	46	21	452	6	8	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2259509-2259912	Cluster_5158	Pocillopora_meandrina_HIv1___Sc0000020	2259509	2259912	404	229	148	0.3930131004366812	.	AAUUAACGCAGCAUCCGAGAUCUUUCAGA	13	5	210	0	2	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2259957-2262435	Cluster_5159	Pocillopora_meandrina_HIv1___Sc0000020	2259957	2262435	2479	8129	1052	0.05314306802804773	-	UGAGACGAAACCCGACUACAGAAUAGCU	1550	28	7686	12	28	55	320	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2339084-2339501	Cluster_5160	Pocillopora_meandrina_HIv1___Sc0000020	2339084	2339501	418	172	14	0.023255813953488372	-	CGGCCUGAAAAAAAAAAA	129	166	3	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2449892-2450316	Cluster_5161	Pocillopora_meandrina_HIv1___Sc0000020	2449892	2450316	425	167	80	0.005988023952095809	-	GACGGUGUAUGCCUCUGAUGGUUGUA	18	37	90	7	12	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2454190-2454610	Cluster_5162	Pocillopora_meandrina_HIv1___Sc0000020	2454190	2454610	421	125	23	0.0	-	UCCAGCACCAAUGUUAUUGUUA	40	9	1	53	51	11	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2455027-2455511	Cluster_5163	Pocillopora_meandrina_HIv1___Sc0000020	2455027	2455511	485	680	184	0.0	-	CUAGCCCCGUGCUCCUGUAACAUUU	170	148	366	35	66	22	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2557825-2558240	Cluster_5164	Pocillopora_meandrina_HIv1___Sc0000020	2557825	2558240	416	86	9	1.0	+	GUUCUAUUUUGUUGGC	78	84	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2571080-2571510	Cluster_5165	Pocillopora_meandrina_HIv1___Sc0000020	2571080	2571510	431	11363	302	0.0002640147848279504	-	GGCCGUGAUCGUAUAGUGGUUAGUACAUU	4396	366	10880	15	7	16	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2582171-2582600	Cluster_5166	Pocillopora_meandrina_HIv1___Sc0000020	2582171	2582600	430	244	164	0.06557377049180328	-	GCACAUAUACUAAAAUUGGAACGAUACAGA	9	48	106	36	25	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2598845-2599327	Cluster_5167	Pocillopora_meandrina_HIv1___Sc0000020	2598845	2599327	483	2214	728	0.9688346883468835	+	UUGGAACGAUACAGAGAAGAUUAGCA	82	490	987	230	152	172	183	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2609484-2609982	Cluster_5168	Pocillopora_meandrina_HIv1___Sc0000020	2609484	2609982	499	9105	1589	0.009555189456342669	-	GCACAUAUACUAAAAUUGGAACGAUA	296	1526	4400	824	611	1034	710	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2623401-2623828	Cluster_5169	Pocillopora_meandrina_HIv1___Sc0000020	2623401	2623828	428	177	66	0.022598870056497175	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	47	2	164	3	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2642180-2642605	Cluster_5170	Pocillopora_meandrina_HIv1___Sc0000020	2642180	2642605	426	1323	89	0.9954648526077098	+	GGCCGUGAUCGUAUAGUGG	747	960	195	24	16	26	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2644695-2645439	Cluster_5171	Pocillopora_meandrina_HIv1___Sc0000020	2644695	2645439	745	338	163	0.9437869822485208	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	51	3	326	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2844026-2845066	Cluster_5172	Pocillopora_meandrina_HIv1___Sc0000020	2844026	2845066	1041	2503	496	0.35996803835397523	.	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	316	21	2354	14	11	23	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2848877-2849478	Cluster_5173	Pocillopora_meandrina_HIv1___Sc0000020	2848877	2849478	602	307	93	0.04560260586319218	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	74	1	288	0	0	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2873332-2873762	Cluster_5174	Pocillopora_meandrina_HIv1___Sc0000020	2873332	2873762	431	16288	395	0.9997544204322201	+	GGCCGUGAUCGUAUAGUGGUUAGUACAUU	5511	764	15355	22	16	36	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2989771-2990214	Cluster_5175	Pocillopora_meandrina_HIv1___Sc0000020	2989771	2990214	444	263	34	0.44866920152091255	.	UGUUUGAUUUUUACAGACUAGCGCUCUUAA	61	16	191	5	10	33	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3033990-3034545	Cluster_5176	Pocillopora_meandrina_HIv1___Sc0000020	3033990	3034545	556	611	223	0.09819967266775777	-	UCCGGUCAGAUUCUUUCCCACUAGCUC	49	14	544	0	9	12	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3036056-3036482	Cluster_5177	Pocillopora_meandrina_HIv1___Sc0000020	3036056	3036482	427	296	131	0.918918918918919	+	UUGGAACGUGUUGCUGAACGCUUGCUA	47	12	248	9	12	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3038313-3038790	Cluster_5178	Pocillopora_meandrina_HIv1___Sc0000020	3038313	3038790	478	410	123	0.024390243902439025	-	UCAAUUGUUUACUUUCCUGGCAGGUUGCC	70	4	383	8	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3257820-3258260	Cluster_5179	Pocillopora_meandrina_HIv1___Sc0000020	3257820	3258260	441	1209	159	0.9842845326716294	+	UCUUCCACUGAUCGUUGAGUUGAAGACUA	210	17	1026	34	20	27	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3808509-3808933	Cluster_5180	Pocillopora_meandrina_HIv1___Sc0000020	3808509	3808933	425	151	42	0.006622516556291391	-	AAGGAAAAGAUCUGAAUCACCGAAUGGUUU	44	2	143	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3891312-3891737	Cluster_5181	Pocillopora_meandrina_HIv1___Sc0000020	3891312	3891737	426	111	30	0.9009009009009009	+	AUAGAUCCAAAAGGUAAAAUUCCAGAA	28	5	103	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4052858-4053283	Cluster_5182	Pocillopora_meandrina_HIv1___Sc0000020	4052858	4053283	426	181	67	0.9502762430939227	+	UUUGUUAGGAGAGUCUGCAACUAAGC	30	1	175	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4152005-4152430	Cluster_5183	Pocillopora_meandrina_HIv1___Sc0000020	4152005	4152430	426	91	37	0.989010989010989	+	UGUGUAGAUAUGUCUUUUGGACAGGA	23	0	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4152989-4153419	Cluster_5184	Pocillopora_meandrina_HIv1___Sc0000020	4152989	4153419	431	591	169	0.9898477157360406	+	UGACUGACUGUGCUUGUGUACGAUACA	80	3	572	0	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4269388-4269816	Cluster_5185	Pocillopora_meandrina_HIv1___Sc0000020	4269388	4269816	429	292	112	0.7876712328767124	.	UGACUAUUCAACAGCUGUUCUUCUACCG	42	1	269	3	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4295667-4296095	Cluster_5186	Pocillopora_meandrina_HIv1___Sc0000020	4295667	4296095	429	157	52	0.0	-	UGUGCCAAAGAUUUAGAACGAAAGAACGA	39	0	153	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4304724-4305153	Cluster_5187	Pocillopora_meandrina_HIv1___Sc0000020	4304724	4305153	430	205	83	0.9853658536585366	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	57	1	200	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4308302-4308724	Cluster_5188	Pocillopora_meandrina_HIv1___Sc0000020	4308302	4308724	423	73	18	0.9452054794520548	+	GUGUAGAUCAGCCGACUUCAACAUGUUU	29	2	67	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4385019-4385501	Cluster_5189	Pocillopora_meandrina_HIv1___Sc0000020	4385019	4385501	483	679	139	0.9455081001472754	+	UGUUUCAAAGAAAGUCACCAAGGCCAAGA	177	6	658	3	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4408578-4409007	Cluster_5190	Pocillopora_meandrina_HIv1___Sc0000020	4408578	4409007	430	176	49	0.005681818181818182	-	UGUGCCAAAGAUUUAGAACGAAAGAACGA	52	2	170	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4625044-4625487	Cluster_5191	Pocillopora_meandrina_HIv1___Sc0000020	4625044	4625487	444	254	131	0.0	-	ACCAGUCGCUGAAUUCGGGUACUGUAGACU	14	73	110	23	13	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4921931-4922354	Cluster_5192	Pocillopora_meandrina_HIv1___Sc0000020	4921931	4922354	424	111	21	1.0	+	UACCGUAGAACUUUCCAGAACAUU	54	9	28	2	1	1	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5066931-5067527	Cluster_5193	Pocillopora_meandrina_HIv1___Sc0000020	5066931	5067527	597	5694	477	0.9978925184404637	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	865	13	5630	3	6	16	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5120303-5120732	Cluster_5194	Pocillopora_meandrina_HIv1___Sc0000020	5120303	5120732	430	2471	200	0.0113314447592068	-	UUCGAAGAAACUCUUGCCAUCGCCUGGA	817	3	2404	0	4	5	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5121680-5122107	Cluster_5195	Pocillopora_meandrina_HIv1___Sc0000020	5121680	5122107	428	117	10	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	78	0	117	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5222988-5223470	Cluster_5196	Pocillopora_meandrina_HIv1___Sc0000020	5222988	5223470	483	1033	181	0.9864472410454985	+	AAUGGGAAAACGAGAACAGCGUGA	92	21	622	21	10	148	211	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5315836-5316254	Cluster_5197	Pocillopora_meandrina_HIv1___Sc0000020	5315836	5316254	419	154	29	0.8116883116883117	+	AUAUGAGAUUAUGAAAGUA	94	131	13	3	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5453827-5454256	Cluster_5198	Pocillopora_meandrina_HIv1___Sc0000020	5453827	5454256	430	1274	59	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUG	1035	0	1274	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5490480-5490904	Cluster_5199	Pocillopora_meandrina_HIv1___Sc0000020	5490480	5490904	425	238	110	0.7857142857142857	.	GUGGAGUUAAAAGUAGGGACAACAGUUGA	13	12	168	6	5	21	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5542041-5542469	Cluster_5200	Pocillopora_meandrina_HIv1___Sc0000020	5542041	5542469	429	388	58	0.01804123711340206	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	280	0	383	0	0	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5542610-5543037	Cluster_5201	Pocillopora_meandrina_HIv1___Sc0000020	5542610	5543037	428	194	106	0.3711340206185567	.	UUUUGCUCUUUAUCGGGUGUCUGGACCAU	17	1	177	0	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5600501-5601310	Cluster_5202	Pocillopora_meandrina_HIv1___Sc0000020	5600501	5601310	810	155288	1027	0.9936891453299675	+	UUCUGCUGAACUACUUUGAGAACGAGU	77162	859	151540	95	90	242	2462	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5780162-5780592	Cluster_5203	Pocillopora_meandrina_HIv1___Sc0000020	5780162	5780592	431	810	86	0.9901234567901235	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	249	1	807	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5821891-5822342	Cluster_5204	Pocillopora_meandrina_HIv1___Sc0000020	5821891	5822342	452	566	64	0.8586572438162544	+	AGUGACAAGAUUUUUCCUGAUGUA	205	6	60	5	45	213	237	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5914229-5914657	Cluster_5205	Pocillopora_meandrina_HIv1___Sc0000020	5914229	5914657	429	100	16	0.99	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	42	0	99	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5915276-5915701	Cluster_5206	Pocillopora_meandrina_HIv1___Sc0000020	5915276	5915701	426	170	101	0.9823529411764705	+	UGGGAAAACGAGAACAGCGUGAGUGUUU	11	1	132	6	3	9	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5931892-5932319	Cluster_5207	Pocillopora_meandrina_HIv1___Sc0000020	5931892	5932319	428	158	50	0.02531645569620253	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	46	0	154	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5977080-5978357	Cluster_5208	Pocillopora_meandrina_HIv1___Sc0000020	5977080	5978357	1278	1256	508	0.08519108280254777	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	104	15	1196	3	4	10	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5979221-5979648	Cluster_5209	Pocillopora_meandrina_HIv1___Sc0000020	5979221	5979648	428	137	45	0.072992700729927	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	67	0	132	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5979732-5980211	Cluster_5210	Pocillopora_meandrina_HIv1___Sc0000020	5979732	5980211	480	363	142	0.09366391184573003	-	UCCAAUCACACACAGUUCUCCUGCGGC	76	3	335	3	1	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5980533-5980960	Cluster_5211	Pocillopora_meandrina_HIv1___Sc0000020	5980533	5980960	428	242	125	0.05785123966942149	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	24	4	223	1	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5981130-5981602	Cluster_5212	Pocillopora_meandrina_HIv1___Sc0000020	5981130	5981602	473	221	113	0.04524886877828054	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	17	1	202	0	3	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6091599-6092028	Cluster_5213	Pocillopora_meandrina_HIv1___Sc0000020	6091599	6092028	430	404	39	0.9801980198019802	+	CGAAGAUGGAAUCAAUAAAUGCAGAACAGG	175	2	350	4	48	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6480082-6480500	Cluster_5214	Pocillopora_meandrina_HIv1___Sc0000020	6480082	6480500	419	100	12	0.0	-	UUUGACAACUUUUGACGGA	59	100	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6703789-6704212	Cluster_5215	Pocillopora_meandrina_HIv1___Sc0000020	6703789	6704212	424	139	53	0.9928057553956835	+	GACGGAUUGAGGAAGCAAGGUCGU	19	28	63	5	6	2	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:193762-194190	Cluster_5216	Pocillopora_meandrina_HIv1___Sc0000021	193762	194190	429	90	13	0.011111111111111112	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	34	0	90	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:324463-324937	Cluster_5217	Pocillopora_meandrina_HIv1___Sc0000021	324463	324937	475	44501	2113	0.9985168872609604	+	GAGGUCCGGACGGUGGAGGGUUAUCCACU	5180	7549	31530	2212	1553	895	762	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:326001-326467	Cluster_5218	Pocillopora_meandrina_HIv1___Sc0000021	326001	326467	467	2668	400	0.9966266866566716	+	AUACCCUUCUCAUAACUUGACUUCCU	268	240	1897	101	181	107	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:326663-327132	Cluster_5219	Pocillopora_meandrina_HIv1___Sc0000021	326663	327132	470	233400	3572	0.9995715509854327	+	GAGGUCCGGACGGCUGAGGGUUAUCUCACA	48709	19136	179969	10311	12807	6998	4179	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:593502-593930	Cluster_5220	Pocillopora_meandrina_HIv1___Sc0000021	593502	593930	429	246	188	1.0	+	CCGCUCGGAGUGCCUGAUGAAAAGACA	5	56	99	28	24	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:608438-608851	Cluster_5221	Pocillopora_meandrina_HIv1___Sc0000021	608438	608851	414	193	149	1.0	+	ACAAUGUGUUUGACGGUAUGCG	4	33	99	19	14	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:608944-609366	Cluster_5222	Pocillopora_meandrina_HIv1___Sc0000021	608944	609366	423	205	152	1.0	+	UGCGGUAGAAAUACGGAAGAGACU	6	30	89	21	16	19	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:758132-758551	Cluster_5223	Pocillopora_meandrina_HIv1___Sc0000021	758132	758551	420	931	49	1.0	+	CCCGGGUCUCGGCACCAU	387	930	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:784913-785341	Cluster_5224	Pocillopora_meandrina_HIv1___Sc0000021	784913	785341	429	140	37	0.007142857142857143	-	UAAGCAACAUGGGAGCUAUGGUAUUCUUG	55	4	119	3	10	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:896386-896814	Cluster_5225	Pocillopora_meandrina_HIv1___Sc0000021	896386	896814	429	519	63	0.017341040462427744	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	316	5	507	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:975531-975948	Cluster_5226	Pocillopora_meandrina_HIv1___Sc0000021	975531	975948	418	233	143	0.0	-	AGCCGGUUUUAGGAAUGUUA	9	64	68	35	26	26	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1005509-1005931	Cluster_5227	Pocillopora_meandrina_HIv1___Sc0000021	1005509	1005931	423	250	136	0.0	-	AAAAAGAAUGGGACUGUCUGUAAUA	25	56	98	14	18	43	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1065156-1065872	Cluster_5228	Pocillopora_meandrina_HIv1___Sc0000021	1065156	1065872	717	389	203	0.10025706940874037	-	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	27	8	354	1	0	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1068005-1068589	Cluster_5229	Pocillopora_meandrina_HIv1___Sc0000021	1068005	1068589	585	903	294	0.05647840531561462	-	UGUACUAAUCUUUCCGCCUGACCAUUGGUU	123	6	859	3	6	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1068665-1069094	Cluster_5230	Pocillopora_meandrina_HIv1___Sc0000021	1068665	1069094	430	632	145	0.0189873417721519	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	139	0	623	4	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1499718-1500140	Cluster_5231	Pocillopora_meandrina_HIv1___Sc0000021	1499718	1500140	423	1230	55	1.0	+	UGUGAUUGGAGACUUUUAUCGU	690	33	1	8	1111	64	13	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1662373-1662791	Cluster_5232	Pocillopora_meandrina_HIv1___Sc0000021	1662373	1662791	419	114	40	0.8947368421052632	+	UGCUUUGGACGAAAUUUCGAGGUUCACACC	18	10	96	3	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1663270-1663727	Cluster_5233	Pocillopora_meandrina_HIv1___Sc0000021	1663270	1663727	458	5189	155	0.012526498361919445	-	UGCAUUGUGUUUGCUUCCAGACUUGACUU	1196	68	5060	3	14	26	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1663833-1664360	Cluster_5234	Pocillopora_meandrina_HIv1___Sc0000021	1663833	1664360	528	1315	171	0.9247148288973384	+	AUUUUAAUCAUGUUGGGACUUAAAGGUG	308	12	1206	2	15	49	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1708235-1708668	Cluster_5235	Pocillopora_meandrina_HIv1___Sc0000021	1708235	1708668	434	190	52	0.5578947368421052	.	UACCAUAGAUCUCUCCAAAGCAUUUGACU	36	4	182	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1803561-1803986	Cluster_5236	Pocillopora_meandrina_HIv1___Sc0000021	1803561	1803986	426	139	49	0.920863309352518	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	17	1	135	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1805532-1805954	Cluster_5237	Pocillopora_meandrina_HIv1___Sc0000021	1805532	1805954	423	161	11	0.0	-	UUUAGAUUGUGUAAGUAGUGUGA	88	9	1	13	36	91	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1807854-1808415	Cluster_5238	Pocillopora_meandrina_HIv1___Sc0000021	1807854	1808415	562	1094	249	0.5722120658135283	.	AAAAGAACGAAGACGCUGCCAAGA	65	59	856	40	14	25	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1810323-1810759	Cluster_5239	Pocillopora_meandrina_HIv1___Sc0000021	1810323	1810759	437	956	136	0.9592050209205021	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	398	20	912	14	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1814973-1815409	Cluster_5240	Pocillopora_meandrina_HIv1___Sc0000021	1814973	1815409	437	843	137	0.7935943060498221	.	UCAAGCUCUUCCUGACACCUGUUGUGU	238	9	759	8	9	13	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1823807-1824425	Cluster_5241	Pocillopora_meandrina_HIv1___Sc0000021	1823807	1824425	619	575	143	0.6208695652173913	.	AAGGAUACCACAUUCGGAAGUGUAAGAGA	112	17	489	8	5	38	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2036658-2037086	Cluster_5242	Pocillopora_meandrina_HIv1___Sc0000021	2036658	2037086	429	149	9	0.006711409395973154	-	UAACGAGAUUAAAAUGGCAAUGAACAAUA	91	2	146	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2067953-2068642	Cluster_5243	Pocillopora_meandrina_HIv1___Sc0000021	2067953	2068642	690	1360	334	0.4514705882352941	.	GUACUCGAUAUUGUCUGGAAUUCUGCCA	314	6	1296	2	17	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2342550-2343348	Cluster_5244	Pocillopora_meandrina_HIv1___Sc0000021	2342550	2343348	799	418	251	0.11722488038277512	-	UGAUUUUGGAAUGUUGUUUACGUUGUG	15	4	378	9	0	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2362599-2363028	Cluster_5245	Pocillopora_meandrina_HIv1___Sc0000021	2362599	2363028	430	144	63	0.18055555555555555	-	UGUGUUAACGUUUCACGGACAAGCUACCGA	47	17	112	2	6	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2484436-2485055	Cluster_5246	Pocillopora_meandrina_HIv1___Sc0000021	2484436	2485055	620	729	147	0.578875171467764	.	UGAAGAAUUCACAGUUACUUACUUUAGAUA	94	7	706	3	0	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2487317-2487747	Cluster_5247	Pocillopora_meandrina_HIv1___Sc0000021	2487317	2487747	431	840	130	0.0035714285714285713	-	CAACAAAUCAAACUUGGAGGCUCUUCA	105	2	788	11	2	11	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2598246-2598676	Cluster_5248	Pocillopora_meandrina_HIv1___Sc0000021	2598246	2598676	431	612	139	0.9803921568627451	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	118	1	602	5	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2598797-2599326	Cluster_5249	Pocillopora_meandrina_HIv1___Sc0000021	2598797	2599326	530	571	225	0.989492119089317	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	31	2	558	2	1	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2601469-2601896	Cluster_5250	Pocillopora_meandrina_HIv1___Sc0000021	2601469	2601896	428	133	62	0.9624060150375939	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	22	1	124	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2602529-2602956	Cluster_5251	Pocillopora_meandrina_HIv1___Sc0000021	2602529	2602956	428	75	21	1.0	+	GAGCUUAUAACGUUAGCUGCACUGCAGGCU	23	2	71	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2907106-2907527	Cluster_5252	Pocillopora_meandrina_HIv1___Sc0000021	2907106	2907527	422	139	27	0.0	-	CGGGCUGUGAAAUAUCUUUA	39	44	37	8	17	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2924427-2924957	Cluster_5253	Pocillopora_meandrina_HIv1___Sc0000021	2924427	2924957	531	1194	324	1.0	+	AGUUGAUGAUGAUAAACACUGCGC	288	93	341	58	48	169	485	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3151853-3152286	Cluster_5254	Pocillopora_meandrina_HIv1___Sc0000021	3151853	3152286	434	324	86	0.9814814814814815	+	UGUACAUUCUCCCGAUCGCAGGACAGCU	41	0	315	1	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3153956-3154372	Cluster_5255	Pocillopora_meandrina_HIv1___Sc0000021	3153956	3154372	417	82	39	0.8902439024390244	+	UGUAUUCUGCUACUGGUUCUCCCGAGC	27	2	78	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3254633-3255044	Cluster_5256	Pocillopora_meandrina_HIv1___Sc0000021	3254633	3255044	412	196	85	0.9846938775510204	+	UACGUAGACAUGAUACCC	23	44	143	1	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3261369-3262002	Cluster_5257	Pocillopora_meandrina_HIv1___Sc0000021	3261369	3262002	634	2021	271	0.014349332013854528	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	440	4	1976	2	5	19	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3399015-3399445	Cluster_5258	Pocillopora_meandrina_HIv1___Sc0000021	3399015	3399445	431	775	105	0.0012903225806451613	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	327	11	741	10	4	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3402070-3402499	Cluster_5259	Pocillopora_meandrina_HIv1___Sc0000021	3402070	3402499	430	130	30	0.007692307692307693	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	46	4	118	1	5	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3403523-3403994	Cluster_5260	Pocillopora_meandrina_HIv1___Sc0000021	3403523	3403994	472	123397	1482	0.00012155887096120651	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	28196	9645	106666	3121	1809	828	1328	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3412620-3413043	Cluster_5261	Pocillopora_meandrina_HIv1___Sc0000021	3412620	3413043	424	240	137	0.22083333333333333	.	UCCUGACAUGAUUCUUUGAGUUCUUUCAA	16	4	219	0	1	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3413092-3413514	Cluster_5262	Pocillopora_meandrina_HIv1___Sc0000021	3413092	3413514	423	129	59	0.7674418604651163	.	UAUGCAUUCAAUGAUCGUGGUCGG	25	1	63	0	5	9	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3414488-3414911	Cluster_5263	Pocillopora_meandrina_HIv1___Sc0000021	3414488	3414911	424	112	52	0.30357142857142855	.	UGUUACAAAACCAUUAGAACUAUCAGUU	23	0	89	0	2	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3414935-3415341	Cluster_5264	Pocillopora_meandrina_HIv1___Sc0000021	3414935	3415341	407	157	72	0.1337579617834395	-	UGCAUGUGCUUUGUCUUGGAUUUCAU	15	1	145	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3418513-3419451	Cluster_5265	Pocillopora_meandrina_HIv1___Sc0000021	3418513	3419451	939	11639	921	0.002233868889079818	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	1162	936	9784	320	231	158	210	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3422717-3423187	Cluster_5266	Pocillopora_meandrina_HIv1___Sc0000021	3422717	3423187	471	18192	762	0.0005496921723834653	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	2974	1505	15057	670	460	292	208	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3425000-3425409	Cluster_5267	Pocillopora_meandrina_HIv1___Sc0000021	3425000	3425409	410	72	28	0.0	-	CACCCCUCAUCCGCUACUUUAACCUCAUU	10	12	59	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3426420-3426907	Cluster_5268	Pocillopora_meandrina_HIv1___Sc0000021	3426420	3426907	488	1439	370	0.9895760945100764	+	CUCCCCUCUUCCACUCACUUGACCUCCU	105	252	936	80	81	56	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3428560-3429035	Cluster_5269	Pocillopora_meandrina_HIv1___Sc0000021	3428560	3429035	476	30780	773	0.0035412605588044186	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	6259	2348	26017	909	767	419	320	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3460874-3461303	Cluster_5270	Pocillopora_meandrina_HIv1___Sc0000021	3460874	3461303	430	201	61	0.9502487562189055	+	GAGGUCCGGAUGGUUGAGGGUUAUCAAAUC	35	28	155	11	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3462997-3463468	Cluster_5271	Pocillopora_meandrina_HIv1___Sc0000021	3462997	3463468	472	8411	659	0.0027345143264772324	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	1056	703	6976	291	197	123	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4157525-4157953	Cluster_5272	Pocillopora_meandrina_HIv1___Sc0000021	4157525	4157953	429	208	90	0.5625	.	CUUCCAAUCAAAGUGCGUUGUGAUCGUGU	12	15	178	9	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4236543-4236967	Cluster_5273	Pocillopora_meandrina_HIv1___Sc0000021	4236543	4236967	425	84	37	0.9761904761904762	+	UGUGUAGAUAUGUCUUUUGGACAGGA	22	0	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4328885-4329595	Cluster_5274	Pocillopora_meandrina_HIv1___Sc0000021	4328885	4329595	711	1216	306	0.8462171052631579	+	UUCGGCAAAAACUAAAAGCGGGCGAAGA	304	4	1100	6	3	29	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4351639-4352057	Cluster_5275	Pocillopora_meandrina_HIv1___Sc0000021	4351639	4352057	419	163	39	1.0	+	ACUGAUAUUCACCAAGUG	34	72	4	45	26	13	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4582089-4582510	Cluster_5276	Pocillopora_meandrina_HIv1___Sc0000021	4582089	4582510	422	147	27	0.047619047619047616	-	UGGGCUGAAAUCAUACACGUG	35	12	6	50	30	31	18	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4665570-4665991	Cluster_5277	Pocillopora_meandrina_HIv1___Sc0000021	4665570	4665991	422	213	66	0.028169014084507043	-	UCGAAUCCCACUUCUGACACCA	96	85	5	23	96	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4684925-4685354	Cluster_5278	Pocillopora_meandrina_HIv1___Sc0000021	4684925	4685354	430	95	28	0.9789473684210527	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	36	0	92	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4711499-4711914	Cluster_5279	Pocillopora_meandrina_HIv1___Sc0000021	4711499	4711914	416	119	43	0.3445378151260504	.	GUGGUGGACUGCUUGCAAU	22	91	21	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4905508-4906190	Cluster_5280	Pocillopora_meandrina_HIv1___Sc0000021	4905508	4906190	683	4315	510	0.31471610660486676	.	GUAUCUUCGAAGCUGGAUUACUGUAAUGCC	311	9	4158	12	11	27	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5105603-5106129	Cluster_5281	Pocillopora_meandrina_HIv1___Sc0000021	5105603	5106129	527	781	142	0.39820742637644047	.	UAUUCUUAUCAUCUGCGUUUGGUCUACUGC	122	1	766	0	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5110514-5110942	Cluster_5282	Pocillopora_meandrina_HIv1___Sc0000021	5110514	5110942	429	218	8	0.9908256880733946	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	192	0	217	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5129429-5129855	Cluster_5283	Pocillopora_meandrina_HIv1___Sc0000021	5129429	5129855	427	102	43	0.9117647058823529	+	UGAAACUCUGGUCUGAAAAUAUUUUUAAAAC	24	4	90	1	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5184497-5184901	Cluster_5284	Pocillopora_meandrina_HIv1___Sc0000021	5184497	5184901	405	81	40	1.0	+	AAUAUACUGAAGACAGAGAAGUCCUGCUC	19	10	62	1	4	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5199336-5199754	Cluster_5285	Pocillopora_meandrina_HIv1___Sc0000021	5199336	5199754	419	187	40	0.0053475935828877	-	CACCCCUUGUAGUAGUCAG	43	174	1	7	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5275554-5275969	Cluster_5286	Pocillopora_meandrina_HIv1___Sc0000021	5275554	5275969	416	220	111	0.9954545454545455	+	UAAAACUCUCUUCCUGUAACCUCAGCAGGUG	14	8	207	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5276833-5277938	Cluster_5287	Pocillopora_meandrina_HIv1___Sc0000021	5276833	5277938	1106	107910	2333	0.9999629320730238	+	UUCAUUCUAACAGACGCUUUGUAAAAUCCU	10030	234	105188	187	579	1551	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5278062-5278492	Cluster_5288	Pocillopora_meandrina_HIv1___Sc0000021	5278062	5278492	431	254	97	1.0	+	UUCUUUGACGUGUUACACCAUACAGAUGGUC	56	2	246	1	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5306354-5306783	Cluster_5289	Pocillopora_meandrina_HIv1___Sc0000021	5306354	5306783	430	1203	74	0.99833748960931	+	UUCGAAUGAAGCAAGGUGUUCCUGAACUU	614	5	1193	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5319271-5319710	Cluster_5290	Pocillopora_meandrina_HIv1___Sc0000021	5319271	5319710	440	466	133	1.0	+	GUUAGAAUGAAGAAGGGCGUUCCUUCACU	47	88	327	13	2	16	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5329303-5329729	Cluster_5291	Pocillopora_meandrina_HIv1___Sc0000021	5329303	5329729	427	122	68	1.0	+	UCGUUUCUUCUGGAAUCUCAAUUCUGUGGA	9	0	117	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5602206-5603069	Cluster_5292	Pocillopora_meandrina_HIv1___Sc0000021	5602206	5603069	864	2089	372	0.031115366203925323	-	UGGACGUACGCAUUCACGAUCUCGCUCGUU	140	6	2045	4	5	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5603857-5604284	Cluster_5293	Pocillopora_meandrina_HIv1___Sc0000021	5603857	5604284	428	265	86	0.052830188679245285	-	UGAAUUCUUCGUAAACGGUUUCCUGGUC	88	2	253	2	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5605710-5606138	Cluster_5294	Pocillopora_meandrina_HIv1___Sc0000021	5605710	5606138	429	188	74	0.12234042553191489	-	UUUGCUUGCCAGAUCCUUUAUCCAAUGAA	24	2	165	0	0	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5607117-5607544	Cluster_5295	Pocillopora_meandrina_HIv1___Sc0000021	5607117	5607544	428	190	55	0.015789473684210527	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	47	0	189	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5659494-5659922	Cluster_5296	Pocillopora_meandrina_HIv1___Sc0000021	5659494	5659922	429	240	60	1.0	+	AGAAGAUGGUUCAUACACUGUUGUUAUGA	74	13	204	7	9	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5770832-5771370	Cluster_5297	Pocillopora_meandrina_HIv1___Sc0000021	5770832	5771370	539	3421	574	1.0	+	CUAUGACUGGUCAUUUCAACUGUAACAUUG	484	247	1997	60	171	250	696	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5811526-5811954	Cluster_5298	Pocillopora_meandrina_HIv1___Sc0000021	5811526	5811954	429	258	133	1.0	+	UGGCAAAAUCUACGAGGUCCGACUCAUGAU	28	40	179	7	12	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5973936-5974361	Cluster_5299	Pocillopora_meandrina_HIv1___Sc0000021	5973936	5974361	426	107	35	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	31	0	106	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6041009-6041436	Cluster_5300	Pocillopora_meandrina_HIv1___Sc0000021	6041009	6041436	428	187	68	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	19	3	179	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6107460-6107961	Cluster_5301	Pocillopora_meandrina_HIv1___Sc0000021	6107460	6107961	502	507	131	0.07889546351084813	-	UGAAUGACUUCGUUUGUGCAUUGGUAGGC	88	0	492	1	0	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6116528-6116934	Cluster_5302	Pocillopora_meandrina_HIv1___Sc0000021	6116528	6116934	407	152	86	0.9144736842105263	+	UCAUCUUCAGCGGCUAUCGCAACUGU	12	2	136	0	4	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6157720-6158165	Cluster_5303	Pocillopora_meandrina_HIv1___Sc0000021	6157720	6158165	446	622	195	0.6286173633440515	.	UCACGGUAGUAGUGUUGUUCAAUAGAUU	81	7	453	7	18	93	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6160724-6161150	Cluster_5304	Pocillopora_meandrina_HIv1___Sc0000021	6160724	6161150	427	171	35	0.0	-	UGAUAUCAUCUUUAGCUCUUGAAAAUG	89	1	170	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6165598-6166346	Cluster_5305	Pocillopora_meandrina_HIv1___Sc0000021	6165598	6166346	749	734	281	0.0667574931880109	-	UUCAUGAUCGUUAUGCGAUAGCAGCAAC	56	6	655	4	1	5	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6166615-6167650	Cluster_5306	Pocillopora_meandrina_HIv1___Sc0000021	6166615	6167650	1036	659	313	0.11684370257966616	-	UGGUUGAAUGAUGUUGUCGAGUAGAUU	51	5	582	2	29	16	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6171647-6172585	Cluster_5307	Pocillopora_meandrina_HIv1___Sc0000021	6171647	6172585	939	924	382	0.0021645021645021645	-	UGCUUUCUCGAUGACUGCUUGUUGUGC	42	16	876	10	1	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6173344-6174077	Cluster_5308	Pocillopora_meandrina_HIv1___Sc0000021	6173344	6174077	734	484	192	0.0	-	UGAGUUUGUAGAAGCAAUUUGCCGUCUGC	91	3	471	1	4	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6181745-6182314	Cluster_5309	Pocillopora_meandrina_HIv1___Sc0000021	6181745	6182314	570	598	236	0.08193979933110368	-	UGUUUGUGGUAGACUUGUUUUUGACGUG	54	18	457	12	31	30	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6183967-6184395	Cluster_5310	Pocillopora_meandrina_HIv1___Sc0000021	6183967	6184395	429	497	141	0.030181086519114688	-	UGUAGAAUCAAUCUGUUACUAAGACACC	126	1	471	12	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6186532-6186960	Cluster_5311	Pocillopora_meandrina_HIv1___Sc0000021	6186532	6186960	429	276	153	0.17391304347826086	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	21	3	246	2	4	2	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6188190-6189044	Cluster_5312	Pocillopora_meandrina_HIv1___Sc0000021	6188190	6189044	855	532	264	0.08646616541353383	-	UGUAGUUUUUUUCUGUGUCUGUAAGUGC	30	7	508	1	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6192308-6193276	Cluster_5313	Pocillopora_meandrina_HIv1___Sc0000021	6192308	6193276	969	7098	740	0.04142011834319527	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	1662	32	6944	8	18	33	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6200869-6201444	Cluster_5314	Pocillopora_meandrina_HIv1___Sc0000021	6200869	6201444	576	434	193	0.002304147465437788	-	UUGGAACUAUUGGUGUACUAGCGCUCGAU	18	3	417	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6201989-6202417	Cluster_5315	Pocillopora_meandrina_HIv1___Sc0000021	6201989	6202417	429	505	81	0.0	-	UUGUAAACUUCUCGAACAUUGGCCUAUU	119	4	494	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6211840-6212267	Cluster_5316	Pocillopora_meandrina_HIv1___Sc0000021	6211840	6212267	428	165	78	0.0	-	UUAACGACUUCAAUGAUUGCUCUUUUGGC	15	1	163	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6214988-6215440	Cluster_5317	Pocillopora_meandrina_HIv1___Sc0000021	6214988	6215440	453	420	196	0.007142857142857143	-	UGUAUGUGAGCGGCCUUGACUUGGUUGUA	23	4	391	5	3	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6215616-6216857	Cluster_5318	Pocillopora_meandrina_HIv1___Sc0000021	6215616	6216857	1242	11382	1507	0.02987172728870146	-	UCUGACUGACUAACAGGAUAUCUGCUUC	706	43	11015	24	38	97	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6219623-6220590	Cluster_5319	Pocillopora_meandrina_HIv1___Sc0000021	6219623	6220590	968	28193	1351	0.0011350335189586067	-	UAUGUUGAAUGAGAACUGGAGACCUCGAUU	4472	460	26946	93	153	221	320	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6220618-6221308	Cluster_5320	Pocillopora_meandrina_HIv1___Sc0000021	6220618	6221308	691	539	116	0.014842300556586271	-	UAACGAGAUUAAAAUGGCAAUGAACAAUA	231	3	527	2	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6221535-6221964	Cluster_5321	Pocillopora_meandrina_HIv1___Sc0000021	6221535	6221964	430	417	132	0.0	-	UGCAUUGGCAUGUUUAACUUAAGUUUC	54	1	383	12	2	0	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6222052-6222481	Cluster_5322	Pocillopora_meandrina_HIv1___Sc0000021	6222052	6222481	430	770	133	0.0	-	UGUAUUCGGACAUUUGCAAUUCCACAGG	152	2	752	4	6	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6223462-6223892	Cluster_5323	Pocillopora_meandrina_HIv1___Sc0000021	6223462	6223892	431	234	92	0.05128205128205128	-	UGCAACAAGUUUGGUUUAUGGACAAAAUC	21	5	211	6	1	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6226710-6227744	Cluster_5324	Pocillopora_meandrina_HIv1___Sc0000021	6226710	6227744	1035	18636	1969	0.0013951491736424126	-	UCACAGAACCUGAACCCUCUAAUGGAUGGUC	3006	177	18077	47	114	96	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6227824-6228249	Cluster_5325	Pocillopora_meandrina_HIv1___Sc0000021	6227824	6228249	426	229	82	0.0	-	UGAUUUGCAGCUAACGGAGGUUUGACAGC	55	2	220	5	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6228305-6229009	Cluster_5326	Pocillopora_meandrina_HIv1___Sc0000021	6228305	6229009	705	5422	915	0.040944300995942456	-	UCAGUGUACUUGAGAUUGUGCAGCUCA	560	53	5126	40	21	88	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6229282-6231268	Cluster_5327	Pocillopora_meandrina_HIv1___Sc0000021	6229282	6231268	1987	4249	861	0.015533066603906801	-	UGAUACUUGCAUCAACUUGCACUACUGGC	601	35	4144	11	9	28	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6232086-6233002	Cluster_5328	Pocillopora_meandrina_HIv1___Sc0000021	6232086	6233002	917	736	309	0.001358695652173913	-	UAAAUUCACUGGUUCUCUGGAGUCAACC	28	9	709	4	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6485121-6485533	Cluster_5329	Pocillopora_meandrina_HIv1___Sc0000021	6485121	6485533	413	196	107	0.923469387755102	+	UGCGAAUCUGAAAAUUGGACGGAGAGC	28	2	185	0	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6485763-6486190	Cluster_5330	Pocillopora_meandrina_HIv1___Sc0000021	6485763	6486190	428	242	124	0.9214876033057852	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	23	1	224	0	1	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6486512-6486991	Cluster_5331	Pocillopora_meandrina_HIv1___Sc0000021	6486512	6486991	480	328	127	0.9329268292682927	+	UCCAAUCACACACAGUUCUCCUGCGGC	73	1	312	0	1	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6487009-6487615	Cluster_5332	Pocillopora_meandrina_HIv1___Sc0000021	6487009	6487615	607	1585	431	0.7753943217665615	.	ACCGCUUUUAAGAUUCUGAAAC	101	18	1299	26	116	37	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6488367-6489644	Cluster_5333	Pocillopora_meandrina_HIv1___Sc0000021	6488367	6489644	1278	2912	829	0.9055631868131868	+	UUUUACAUGUUUGACCUCUGGCAGGGCA	357	32	2738	12	15	36	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6537069-6537480	Cluster_5334	Pocillopora_meandrina_HIv1___Sc0000021	6537069	6537480	412	105	55	0.9333333333333333	+	UAAACCACGAGUGCUUGCGAAAUCGAUC	18	4	95	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:149414-149842	Cluster_5335	Pocillopora_meandrina_HIv1___Sc0000022	149414	149842	429	124	43	0.9596774193548387	+	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	39	5	85	9	4	19	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:155777-156215	Cluster_5336	Pocillopora_meandrina_HIv1___Sc0000022	155777	156215	439	206	94	0.45145631067961167	.	UGAUAAAAAAACAGCAACAUCUCUGCCAGC	27	6	187	2	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:158075-158499	Cluster_5337	Pocillopora_meandrina_HIv1___Sc0000022	158075	158499	425	171	87	0.8187134502923976	+	UUCAAUCUCAGACCAUCCAGAUACU	16	2	154	0	1	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:159825-160249	Cluster_5338	Pocillopora_meandrina_HIv1___Sc0000022	159825	160249	425	272	120	0.7463235294117647	.	AGUGUUCUUAGUCAGCUGAAAGAAAUUUU	19	6	249	2	1	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:160663-161072	Cluster_5339	Pocillopora_meandrina_HIv1___Sc0000022	160663	161072	410	190	91	0.5789473684210527	.	UCGGAAUAUCAUUUUGAAGUCAUUUAUG	26	2	151	1	1	19	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:162307-162736	Cluster_5340	Pocillopora_meandrina_HIv1___Sc0000022	162307	162736	430	97	31	0.061855670103092786	-	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	50	14	81	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:282851-283277	Cluster_5341	Pocillopora_meandrina_HIv1___Sc0000022	282851	283277	427	144	44	0.7569444444444444	.	CUGUAAUAAAACUAUCUACUGGCAAGU	38	0	140	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:318503-318947	Cluster_5342	Pocillopora_meandrina_HIv1___Sc0000022	318503	318947	445	532	88	0.9981203007518797	+	UGAUAUAUGUUCAUGUUUGGGUGUAAGUGC	70	0	526	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:554095-554522	Cluster_5343	Pocillopora_meandrina_HIv1___Sc0000022	554095	554522	428	279	101	0.982078853046595	+	UAAUCUGACGUCUGCUCCUAGUUGCUGC	19	1	252	4	1	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:554717-555136	Cluster_5344	Pocillopora_meandrina_HIv1___Sc0000022	554717	555136	420	214	118	0.9018691588785047	+	UAUACCGUGAUUGGAGAAAUGGCGUUUCA	9	2	195	1	1	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:555710-556633	Cluster_5345	Pocillopora_meandrina_HIv1___Sc0000022	555710	556633	924	821	323	0.9366626065773447	+	UGAAAAAUUUCCGGGGCUGGAGUAAUUCC	33	7	791	2	0	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:556708-557595	Cluster_5346	Pocillopora_meandrina_HIv1___Sc0000022	556708	557595	888	1233	406	0.7226277372262774	.	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	286	8	1135	8	7	16	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:557670-558303	Cluster_5347	Pocillopora_meandrina_HIv1___Sc0000022	557670	558303	634	1708	439	0.8559718969555035	+	UGUGAUAAAUGCAGCCACUCGAUACUCG	88	11	1625	9	15	14	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:558312-558798	Cluster_5348	Pocillopora_meandrina_HIv1___Sc0000022	558312	558798	487	182	112	0.15384615384615385	-	UUCAUCUUGUGAUCUAUUCGAAUUGUUU	11	13	144	0	2	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:559206-559633	Cluster_5349	Pocillopora_meandrina_HIv1___Sc0000022	559206	559633	428	150	40	1.0	+	UGUAAAAUCUGGCAUCCUAUUGGAUAAC	76	0	150	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:561059-562462	Cluster_5350	Pocillopora_meandrina_HIv1___Sc0000022	561059	562462	1404	9446	1136	0.9567012492060132	+	UUGGAUUGUAAUAAGGUACAAGAGGCUG	2209	68	9077	21	22	150	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:568214-568663	Cluster_5351	Pocillopora_meandrina_HIv1___Sc0000022	568214	568663	450	897	287	0.9910813823857302	+	UGUUCUUCUUGACUCUGACGAUCUUCAAC	100	8	881	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:569073-569951	Cluster_5352	Pocillopora_meandrina_HIv1___Sc0000022	569073	569951	879	896	362	0.9877232142857143	+	UGCUGAAACGAUUUUGACAGGUUGUCA	55	5	852	2	9	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:570341-571207	Cluster_5353	Pocillopora_meandrina_HIv1___Sc0000022	570341	571207	867	1228	426	0.99185667752443	+	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	74	8	1198	4	3	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:571607-572035	Cluster_5354	Pocillopora_meandrina_HIv1___Sc0000022	571607	572035	429	204	110	0.9803921568627451	+	UGUGAUUUCUGCCUUUUCAUCCGGUGACU	11	1	196	0	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:572487-574176	Cluster_5355	Pocillopora_meandrina_HIv1___Sc0000022	572487	574176	1690	9493	2396	0.9266828189192037	+	UGAUAGACUGCACGACGAUUUACGUCA	537	106	8615	73	82	274	343	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:574230-575304	Cluster_5356	Pocillopora_meandrina_HIv1___Sc0000022	574230	575304	1075	8626	651	0.9960584280083469	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2258	12	8498	3	42	42	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:579552-579977	Cluster_5357	Pocillopora_meandrina_HIv1___Sc0000022	579552	579977	426	104	38	0.9711538461538461	+	UGUGUAGAUAUGUCUUUUGGACAGGA	25	0	103	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:583226-583653	Cluster_5358	Pocillopora_meandrina_HIv1___Sc0000022	583226	583653	428	220	109	1.0	+	UCGGACUUGACUGCGUAAAUGGCGUGAAA	22	2	207	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:591922-593905	Cluster_5359	Pocillopora_meandrina_HIv1___Sc0000022	591922	593905	1984	4766	1508	0.21653378094838438	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	230	51	4050	41	35	153	436	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:595321-596515	Cluster_5360	Pocillopora_meandrina_HIv1___Sc0000022	595321	596515	1195	3288	932	0.7490875912408759	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	649	31	2963	9	136	57	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:601615-605304	Cluster_5361	Pocillopora_meandrina_HIv1___Sc0000022	601615	605304	3690	6505	2342	0.9006917755572637	+	UGUUUGUUGGUAGUUCUGGAUGAUUUCC	324	101	5935	51	57	142	219	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:609873-610283	Cluster_5362	Pocillopora_meandrina_HIv1___Sc0000022	609873	610283	411	149	83	0.9798657718120806	+	UACUGUCACAGAACUUGCACCUUGCCGUU	9	1	143	0	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:612083-612568	Cluster_5363	Pocillopora_meandrina_HIv1___Sc0000022	612083	612568	486	404	156	0.8861386138613861	+	UUAUUCACAAAUAUCUCCAAAUGUUCAA	50	8	366	6	3	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:613100-614026	Cluster_5364	Pocillopora_meandrina_HIv1___Sc0000022	613100	614026	927	2782	819	0.8670021567217829	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	295	28	2580	19	26	64	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:620318-621672	Cluster_5365	Pocillopora_meandrina_HIv1___Sc0000022	620318	621672	1355	1418	556	0.6114245416078985	.	UGUACUUCUCAAUAUUAAAAACUUCACU	92	16	1218	6	12	52	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:628295-628714	Cluster_5366	Pocillopora_meandrina_HIv1___Sc0000022	628295	628714	420	146	60	0.7602739726027398	.	UAAUUCUUAACGACUGUUCAUGUCCAUA	36	1	134	1	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:629958-630528	Cluster_5367	Pocillopora_meandrina_HIv1___Sc0000022	629958	630528	571	403	122	0.9602977667493796	+	UGCGACAAAGUACACCAUUUCUGA	36	2	357	0	0	2	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:635878-636302	Cluster_5368	Pocillopora_meandrina_HIv1___Sc0000022	635878	636302	425	121	59	0.008264462809917356	-	UCUUCUCGUGAUUUCCGUUUCCUUCUC	21	1	113	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:642188-642683	Cluster_5369	Pocillopora_meandrina_HIv1___Sc0000022	642188	642683	496	308	150	0.5194805194805194	.	UGAUUUAGAAAUAAGAAAUGAUUCU	21	3	280	1	1	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:670832-671259	Cluster_5370	Pocillopora_meandrina_HIv1___Sc0000022	670832	671259	428	159	78	0.9748427672955975	+	UGUAGUUAUCUCUUUCUCCAAUUUUAGG	30	2	153	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:672154-672579	Cluster_5371	Pocillopora_meandrina_HIv1___Sc0000022	672154	672579	426	115	42	0.991304347826087	+	UAGCGAUAGAAAAUCUUAACAAUUAU	26	0	114	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:675440-675925	Cluster_5372	Pocillopora_meandrina_HIv1___Sc0000022	675440	675925	486	992	218	0.9788306451612904	+	UGUUCCAAUAUUUUUCGGUCGAGAUCCACU	220	16	919	48	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:676214-676928	Cluster_5373	Pocillopora_meandrina_HIv1___Sc0000022	676214	676928	715	2118	605	0.9414542020774316	+	UGAUAGCAACAAUGAAGGUCUGAAGAGA	84	32	1964	12	14	38	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:680302-680730	Cluster_5374	Pocillopora_meandrina_HIv1___Sc0000022	680302	680730	429	258	68	0.9069767441860465	+	UUCUUUAGGUCUUGGCAUUCAUCAGCA	40	1	240	1	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:720458-721172	Cluster_5375	Pocillopora_meandrina_HIv1___Sc0000022	720458	721172	715	3759	704	0.9784517158818835	+	UGUGAUAUUCCGAACACUUGAAUGAGUCA	208	22	3529	20	19	52	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:736660-737892	Cluster_5376	Pocillopora_meandrina_HIv1___Sc0000022	736660	737892	1233	2651	630	0.9155035835533761	+	UGGGAUUACAUGUGGAAUUAUUUGACCGCU	136	24	2462	7	10	46	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:768014-768799	Cluster_5377	Pocillopora_meandrina_HIv1___Sc0000022	768014	768799	786	1446	406	0.8879668049792531	+	UGCUGUCUAGUUCCGACUAUCAUAAACUC	66	19	1346	2	7	15	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:775919-776448	Cluster_5378	Pocillopora_meandrina_HIv1___Sc0000022	775919	776448	530	3532	260	0.03454133635334088	-	UGUGACAGCUCUUUUCCUCCUGCAAAGA	696	38	2828	453	50	52	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:776499-776938	Cluster_5379	Pocillopora_meandrina_HIv1___Sc0000022	776499	776938	440	1267	227	0.016574585635359115	-	UACUGAACUUCUUCCAACCAGUGGAGAGA	263	8	1212	4	13	4	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:788297-788726	Cluster_5380	Pocillopora_meandrina_HIv1___Sc0000022	788297	788726	430	301	48	1.0	+	UGCAUUUCUAAUUCUGGUUUCGGUUACUCC	148	1	300	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:813610-814041	Cluster_5381	Pocillopora_meandrina_HIv1___Sc0000022	813610	814041	432	21425	241	0.002333722287047841	-	UAACUUCAACUAGAUCGAAAUGCUCGUGA	15238	2	21335	2	2	5	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:836778-837203	Cluster_5382	Pocillopora_meandrina_HIv1___Sc0000022	836778	837203	426	196	137	0.8112244897959183	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	13	1	168	9	4	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:837291-837710	Cluster_5383	Pocillopora_meandrina_HIv1___Sc0000022	837291	837710	420	314	199	0.9394904458598726	+	UCAGACACGUGGAUACUUGCGAUGAAGU	16	3	293	0	3	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:838061-838491	Cluster_5384	Pocillopora_meandrina_HIv1___Sc0000022	838061	838491	431	234	104	0.9316239316239316	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	20	1	216	2	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:839221-839647	Cluster_5385	Pocillopora_meandrina_HIv1___Sc0000022	839221	839647	427	179	63	0.7206703910614525	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	29	0	143	2	2	0	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:844611-845312	Cluster_5386	Pocillopora_meandrina_HIv1___Sc0000022	844611	845312	702	269	130	0.9256505576208178	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	36	1	253	3	4	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:846539-846971	Cluster_5387	Pocillopora_meandrina_HIv1___Sc0000022	846539	846971	433	305	164	0.8327868852459016	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	39	0	282	2	1	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:879826-880278	Cluster_5388	Pocillopora_meandrina_HIv1___Sc0000022	879826	880278	453	198	109	0.30303030303030304	.	CGCGAUCUUCGGUUGCCUGA	17	95	33	45	13	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1097611-1098031	Cluster_5389	Pocillopora_meandrina_HIv1___Sc0000022	1097611	1098031	421	93	47	0.053763440860215055	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	16	0	89	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1101425-1101852	Cluster_5390	Pocillopora_meandrina_HIv1___Sc0000022	1101425	1101852	428	155	48	0.05806451612903226	-	UGUAAUAAUCGUUUUGGGUAAUCUCAACA	56	0	147	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1103330-1103759	Cluster_5391	Pocillopora_meandrina_HIv1___Sc0000022	1103330	1103759	430	841	155	0.9560047562425684	+	UAGUAUAACUUUGAUCUGAUGAAAAUCAUC	306	3	821	4	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1339659-1340085	Cluster_5392	Pocillopora_meandrina_HIv1___Sc0000022	1339659	1340085	427	159	27	0.9937106918238994	+	UGUUGAACAAUCGUGUACGGUGUGGGA	83	0	153	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1443632-1444321	Cluster_5393	Pocillopora_meandrina_HIv1___Sc0000022	1443632	1444321	690	436	132	0.963302752293578	+	AAAGAUCUGAAUUGACAAAUAGUGUACAGU	101	4	365	2	4	17	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1490221-1490639	Cluster_5394	Pocillopora_meandrina_HIv1___Sc0000022	1490221	1490639	419	267	177	0.9962546816479401	+	GAGCUAUUGAAAUUUUGACGAAAU	10	46	135	17	28	16	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1757056-1757483	Cluster_5395	Pocillopora_meandrina_HIv1___Sc0000022	1757056	1757483	428	150	59	0.9733333333333334	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	39	1	139	1	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1877285-1878073	Cluster_5396	Pocillopora_meandrina_HIv1___Sc0000022	1877285	1878073	789	900	346	0.051111111111111114	-	UCCGUGACACAACGACUUUGCCUUGCUU	144	9	867	0	6	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1878243-1878691	Cluster_5397	Pocillopora_meandrina_HIv1___Sc0000022	1878243	1878691	449	444	191	0.2072072072072072	.	UAUGACGUUCCAGAAUCUUUGACAAAA	26	3	427	4	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1879214-1879642	Cluster_5398	Pocillopora_meandrina_HIv1___Sc0000022	1879214	1879642	429	141	50	0.02127659574468085	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	17	0	141	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2039814-2040242	Cluster_5399	Pocillopora_meandrina_HIv1___Sc0000022	2039814	2040242	429	296	54	0.8006756756756757	+	UGAUAUCAUAUUCUCUGUUUCCUCAUC	115	10	237	14	6	25	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2609780-2610189	Cluster_5400	Pocillopora_meandrina_HIv1___Sc0000022	2609780	2610189	410	78	50	0.32051282051282054	.	GUUUAGAUCAGUCUCGGAAAAGGUUGUCU	6	1	64	1	6	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2722536-2722950	Cluster_5401	Pocillopora_meandrina_HIv1___Sc0000022	2722536	2722950	415	82	33	0.04878048780487805	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	26	1	77	3	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2724250-2724677	Cluster_5402	Pocillopora_meandrina_HIv1___Sc0000022	2724250	2724677	428	191	81	0.02617801047120419	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	4	178	0	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2864952-2865381	Cluster_5403	Pocillopora_meandrina_HIv1___Sc0000022	2864952	2865381	430	344	104	0.011627906976744186	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	48	0	334	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2866527-2867222	Cluster_5404	Pocillopora_meandrina_HIv1___Sc0000022	2866527	2867222	696	250	117	0.436	.	UCCGAAAAAUGUCAACAGAGAACUGCUUG	44	1	243	4	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2931954-2932373	Cluster_5405	Pocillopora_meandrina_HIv1___Sc0000022	2931954	2932373	420	236	45	0.00423728813559322	-	CUCUGUCUCUGUCCGUGU	57	204	11	5	7	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2937470-2937899	Cluster_5406	Pocillopora_meandrina_HIv1___Sc0000022	2937470	2937899	430	157	40	0.9936305732484076	+	ACAUAUACCGGGUAUUUCUAAACACUGCUU	30	5	142	1	7	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3392158-3392706	Cluster_5407	Pocillopora_meandrina_HIv1___Sc0000022	3392158	3392706	549	545	363	0.0	-	GAAGGAGUUCGGUGGAGCUGUAGACA	8	133	231	42	60	42	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4272758-4273191	Cluster_5408	Pocillopora_meandrina_HIv1___Sc0000022	4272758	4273191	434	420	65	0.009523809523809525	-	UGAUUUGUGACUGCUGUUGUUGCAUGGC	180	3	413	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4274315-4274900	Cluster_5409	Pocillopora_meandrina_HIv1___Sc0000022	4274315	4274900	586	595	235	0.7176470588235294	.	UCAAAAUCUUCGUAAUUCUGGUAAGGA	43	10	526	8	6	21	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4311659-4312082	Cluster_5410	Pocillopora_meandrina_HIv1___Sc0000022	4311659	4312082	424	79	25	0.9113924050632911	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	47	0	72	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4315335-4315931	Cluster_5411	Pocillopora_meandrina_HIv1___Sc0000022	4315335	4315931	597	5617	506	0.002670464660850988	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	871	14	5554	2	9	7	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4334556-4334977	Cluster_5412	Pocillopora_meandrina_HIv1___Sc0000022	4334556	4334977	422	218	21	0.9770642201834863	+	UCUGACGAAGGGCUGACGCUCA	173	7	0	15	184	9	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4496866-4497284	Cluster_5413	Pocillopora_meandrina_HIv1___Sc0000022	4496866	4497284	419	158	5	1.0	+	AUGGACUAUGAUUUUUUU	74	158	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4641549-4641973	Cluster_5414	Pocillopora_meandrina_HIv1___Sc0000022	4641549	4641973	425	91	33	0.9560439560439561	+	UGUGUAGAUAUGUCUUUUGGACAGGA	23	0	90	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4679819-4680359	Cluster_5415	Pocillopora_meandrina_HIv1___Sc0000022	4679819	4680359	541	500	163	0.488	.	AUGAGAUUCAUGAAUGGAGACAACC	50	4	444	2	11	6	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4681239-4681674	Cluster_5416	Pocillopora_meandrina_HIv1___Sc0000022	4681239	4681674	436	513	101	1.0	+	UGUAAGACUGACAAAGGCUAAGGUGAACAGC	128	5	492	3	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4773435-4774094	Cluster_5417	Pocillopora_meandrina_HIv1___Sc0000022	4773435	4774094	660	610	134	0.940983606557377	+	AUGGGUCUUAUUGAGCAUUACAGA	79	6	454	6	5	12	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4949268-4950131	Cluster_5418	Pocillopora_meandrina_HIv1___Sc0000022	4949268	4950131	864	732	340	0.33879781420765026	.	UGCUGUAUCAUCUGAAAACAAAGAAUGC	33	6	637	12	10	23	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4995172-4995791	Cluster_5419	Pocillopora_meandrina_HIv1___Sc0000022	4995172	4995791	620	18619	2353	0.000966754390676191	-	CCUCUGAGCGCGAAGCACGUUGCC	1245	4111	6549	1520	2335	1655	2449	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5033872-5034408	Cluster_5420	Pocillopora_meandrina_HIv1___Sc0000022	5033872	5034408	537	835	294	1.0	+	GACAGAACGUUUGAUGGAAUU	63	146	415	113	60	72	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5113156-5113580	Cluster_5421	Pocillopora_meandrina_HIv1___Sc0000022	5113156	5113580	425	92	31	0.010869565217391304	-	UGUGUAGAUAUGUCUUUUGGACAGGA	35	0	89	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5232770-5233198	Cluster_5422	Pocillopora_meandrina_HIv1___Sc0000022	5232770	5233198	429	102	28	0.9901960784313726	+	AACUGAAGAACCGAUCUCUAAAAUUGAUU	45	2	96	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5310368-5310789	Cluster_5423	Pocillopora_meandrina_HIv1___Sc0000022	5310368	5310789	422	165	12	1.0	+	UCUGACGAAGGGCUGACGCUCA	138	7	0	5	148	5	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5319073-5319526	Cluster_5424	Pocillopora_meandrina_HIv1___Sc0000022	5319073	5319526	454	174	72	0.9367816091954023	+	UCGAUGUUACUGUCCGUUCUCCGUUGA	39	3	157	3	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5504939-5505348	Cluster_5425	Pocillopora_meandrina_HIv1___Sc0000022	5504939	5505348	410	74	8	0.8243243243243243	+	UAAGCUUUCGUCCAUGUUAUCACUU	41	1	72	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5625640-5626072	Cluster_5426	Pocillopora_meandrina_HIv1___Sc0000022	5625640	5626072	433	316	110	0.9810126582278481	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	32	9	287	3	4	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5637573-5637993	Cluster_5427	Pocillopora_meandrina_HIv1___Sc0000022	5637573	5637993	421	171	17	0.0	-	GUGAUAGAUCUUUUGGAGACGA	50	103	0	17	50	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5787456-5787885	Cluster_5428	Pocillopora_meandrina_HIv1___Sc0000022	5787456	5787885	430	615	115	0.991869918699187	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	116	0	611	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5788005-5788536	Cluster_5429	Pocillopora_meandrina_HIv1___Sc0000022	5788005	5788536	532	613	221	0.9934747145187602	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	29	3	604	1	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5790680-5791105	Cluster_5430	Pocillopora_meandrina_HIv1___Sc0000022	5790680	5791105	426	124	63	0.9596774193548387	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	21	0	115	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:6057719-6058222	Cluster_5431	Pocillopora_meandrina_HIv1___Sc0000022	6057719	6058222	504	1934	361	0.0	-	GAAGGAUGAUGACCUAAAAGGCC	185	272	504	136	359	487	176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3659-5396	Cluster_5432	Pocillopora_meandrina_HIv1___Sc0000023	3659	5396	1738	2796	1115	0.05150214592274678	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	85	20	2634	9	27	54	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:132586-133142	Cluster_5433	Pocillopora_meandrina_HIv1___Sc0000023	132586	133142	557	491	185	0.0	-	GAAUUUUGCAGGCUCAUACAACU	44	79	239	30	46	67	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:134704-135255	Cluster_5434	Pocillopora_meandrina_HIv1___Sc0000023	134704	135255	552	1785	397	0.0	-	GCUUACUGCCAGACUACAGAC	203	466	689	347	95	120	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:288293-288719	Cluster_5435	Pocillopora_meandrina_HIv1___Sc0000023	288293	288719	427	147	37	0.9863945578231292	+	UUUGACUGUAUUUUUUAUUCCUA	40	1	99	1	2	44	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:613115-613526	Cluster_5436	Pocillopora_meandrina_HIv1___Sc0000023	613115	613526	412	113	52	0.08849557522123894	-	UGAACAAACGUGAGCUUGAGCGAAUUGAAC	28	4	102	1	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:613556-613981	Cluster_5437	Pocillopora_meandrina_HIv1___Sc0000023	613556	613981	426	120	53	0.008333333333333333	-	ACGAUCACGUCGAACUGUAUGGCAGCUAGC	17	3	112	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:622107-622951	Cluster_5438	Pocillopora_meandrina_HIv1___Sc0000023	622107	622951	845	709	257	0.2764456981664316	.	UGUUGGACUCUCCAUGGAUGCGCCUGG	52	6	627	12	3	14	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:662021-662453	Cluster_5439	Pocillopora_meandrina_HIv1___Sc0000023	662021	662453	433	285	100	0.25263157894736843	.	UAGGACAAUUAGCAUUACAGCAGCUUA	32	2	266	2	4	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:663892-664317	Cluster_5440	Pocillopora_meandrina_HIv1___Sc0000023	663892	664317	426	181	93	0.8784530386740331	+	UAUCGAGUACUUUCGGCGAAGGAGGCCAA	10	1	162	1	6	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:664380-664806	Cluster_5441	Pocillopora_meandrina_HIv1___Sc0000023	664380	664806	427	128	39	0.984375	+	UGAUAAGUGGAGCCAGGCGUACAUCUAG	24	0	121	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:723792-724221	Cluster_5442	Pocillopora_meandrina_HIv1___Sc0000023	723792	724221	430	193	43	0.9948186528497409	+	UGUUAAUCGAGAGAAGCAUAGACGCAAAUC	90	0	192	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:754024-754453	Cluster_5443	Pocillopora_meandrina_HIv1___Sc0000023	754024	754453	430	350	37	1.0	+	UUCCAUGACUCUGUUUAAACGAAAACGAAC	221	0	348	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:757105-757624	Cluster_5444	Pocillopora_meandrina_HIv1___Sc0000023	757105	757624	520	4830	302	0.9952380952380953	+	UGUUAUUUGUGUCUAAUGUUGUCGAACAC	953	13	4766	8	14	14	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:757805-758231	Cluster_5445	Pocillopora_meandrina_HIv1___Sc0000023	757805	758231	427	179	91	0.18994413407821228	-	UGAGGAAUCGAGAUGGCUAGCUGUGUU	32	11	143	3	8	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:758300-758730	Cluster_5446	Pocillopora_meandrina_HIv1___Sc0000023	758300	758730	431	660	65	0.004545454545454545	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	214	0	660	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:765065-766077	Cluster_5447	Pocillopora_meandrina_HIv1___Sc0000023	765065	766077	1013	2951	414	0.9623856319891562	+	UCGGAUCUUUCACCUCAUGAGCAGCGAGA	870	11	2897	3	1	16	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1061848-1062274	Cluster_5448	Pocillopora_meandrina_HIv1___Sc0000023	1061848	1062274	427	179	19	0.9776536312849162	+	UGGUAAAAUUCUGUUCAAAGUAGGUGC	149	0	176	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1539197-1539697	Cluster_5449	Pocillopora_meandrina_HIv1___Sc0000023	1539197	1539697	501	365	180	0.019178082191780823	-	AAGACAACGACACAUUUGUGCAUUC	36	66	171	38	16	27	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1594033-1594461	Cluster_5450	Pocillopora_meandrina_HIv1___Sc0000023	1594033	1594461	429	93	17	0.0	-	CUCAUGUACAGCAGAACUUGUUGAAUCUG	60	2	89	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1635912-1636355	Cluster_5451	Pocillopora_meandrina_HIv1___Sc0000023	1635912	1636355	444	990	169	1.0	+	UUCCUCUCUGAGCUUACCACAGUCAUGUGAU	220	147	614	78	17	67	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1636538-1636961	Cluster_5452	Pocillopora_meandrina_HIv1___Sc0000023	1636538	1636961	424	127	62	0.984251968503937	+	AUGUGGAUUAUUUGGUUUAUGAUA	20	8	63	5	7	17	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1648832-1649372	Cluster_5453	Pocillopora_meandrina_HIv1___Sc0000023	1648832	1649372	541	3506	798	1.0	+	ACCCAAAGUGUCAAAUUCCUGGAUA	397	433	1899	522	174	220	258	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1653651-1654082	Cluster_5454	Pocillopora_meandrina_HIv1___Sc0000023	1653651	1654082	432	369	124	1.0	+	ACUAUGUUGAUAUUAGGACGGCAUGAGGUUG	77	51	260	9	12	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1661773-1662196	Cluster_5455	Pocillopora_meandrina_HIv1___Sc0000023	1661773	1662196	424	124	60	1.0	+	AUGUGGAUUAUUUGGUUUAUGAUA	20	7	64	6	9	12	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1887619-1888052	Cluster_5456	Pocillopora_meandrina_HIv1___Sc0000023	1887619	1888052	434	184	69	0.0	-	AACGUGUCACUUGCGAAGAAAUCUGAAGU	23	2	181	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1889295-1889722	Cluster_5457	Pocillopora_meandrina_HIv1___Sc0000023	1889295	1889722	428	200	70	0.985	+	UGAACCGUGCCGAUCUGCUGCCCUUUGA	44	0	194	1	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2039299-2039724	Cluster_5458	Pocillopora_meandrina_HIv1___Sc0000023	2039299	2039724	426	99	32	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	26	0	98	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2092558-2092986	Cluster_5459	Pocillopora_meandrina_HIv1___Sc0000023	2092558	2092986	429	112	24	0.008928571428571428	-	UCUACAUAAUCUCUUUCUGCAUCACUGAAG	51	1	110	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2508726-2509156	Cluster_5460	Pocillopora_meandrina_HIv1___Sc0000023	2508726	2509156	431	124	25	0.008064516129032258	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	64	0	123	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2562485-2562914	Cluster_5461	Pocillopora_meandrina_HIv1___Sc0000023	2562485	2562914	430	155	57	1.0	+	UGCUUCUAACUCGGGCUGUCUGCCACAGUGG	35	2	151	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2586871-2587289	Cluster_5462	Pocillopora_meandrina_HIv1___Sc0000023	2586871	2587289	419	686	17	1.0	+	CUUUCUGGAGUUAAGGAU	447	682	0	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2665435-2666773	Cluster_5463	Pocillopora_meandrina_HIv1___Sc0000023	2665435	2666773	1339	3147	255	0.9939625039720369	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	1658	9	3094	4	4	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2666912-2667321	Cluster_5464	Pocillopora_meandrina_HIv1___Sc0000023	2666912	2667321	410	95	47	0.42105263157894735	.	CAGUUGUCAACUGGAGUAGGGCCA	8	0	59	0	0	24	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2667925-2668655	Cluster_5465	Pocillopora_meandrina_HIv1___Sc0000023	2667925	2668655	731	367	132	0.42779291553133514	.	CUUGUCUUCGAUCGACAGAGUCAUGUAGU	25	20	262	24	7	13	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2715856-2716273	Cluster_5466	Pocillopora_meandrina_HIv1___Sc0000023	2715856	2716273	418	96	42	0.78125	.	ACGGAAAAUGCGUGCACUGU	23	76	1	11	2	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2752938-2754130	Cluster_5467	Pocillopora_meandrina_HIv1___Sc0000023	2752938	2754130	1193	3144	872	0.2321882951653944	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	693	31	2854	11	126	42	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2755547-2757531	Cluster_5468	Pocillopora_meandrina_HIv1___Sc0000023	2755547	2757531	1985	4889	1502	0.7840049089793414	.	UUACGAAAUAUCUGAUGGCUGAUC	257	59	4133	42	30	138	487	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2850001-2850429	Cluster_5469	Pocillopora_meandrina_HIv1___Sc0000023	2850001	2850429	429	171	39	0.9883040935672515	+	UGCUUUAGUCACAGACUUUGCACCUGAAA	58	3	165	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2851851-2852313	Cluster_5470	Pocillopora_meandrina_HIv1___Sc0000023	2851851	2852313	463	430	131	0.7744186046511627	.	UUUAUGCGGUCUUUGAUGCCGAGAAGUCUGC	89	7	391	2	11	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3040453-3040893	Cluster_5471	Pocillopora_meandrina_HIv1___Sc0000023	3040453	3040893	441	1666	98	0.8841536614645858	+	UGAAUCCGCUUUGCAGCAUAAAUGAGC	993	7	1461	11	3	16	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3041761-3042170	Cluster_5472	Pocillopora_meandrina_HIv1___Sc0000023	3041761	3042170	410	147	85	0.6598639455782312	.	CAGUUGUCAACUGGAGUAGGGCCA	7	1	112	0	1	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3042931-3043511	Cluster_5473	Pocillopora_meandrina_HIv1___Sc0000023	3042931	3043511	581	281	127	0.8896797153024911	+	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCA	29	5	263	3	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3062445-3062972	Cluster_5474	Pocillopora_meandrina_HIv1___Sc0000023	3062445	3062972	528	4934	463	0.9355492501013376	+	UAUGUUGAACGAGAACUGAGGACCUCGAUC	785	17	4755	13	24	80	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3120578-3121006	Cluster_5475	Pocillopora_meandrina_HIv1___Sc0000023	3120578	3121006	429	1399	69	1.0	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	978	2	1393	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3121387-3121812	Cluster_5476	Pocillopora_meandrina_HIv1___Sc0000023	3121387	3121812	426	174	64	0.39080459770114945	.	UCUGCAUGAAGAACAGACCACCUGAUGA	17	1	164	2	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3123006-3123575	Cluster_5477	Pocillopora_meandrina_HIv1___Sc0000023	3123006	3123575	570	1199	198	0.8565471226021685	+	UGAUAAGCUCAGAUCGCUCGAUGUCAGU	292	7	1148	10	10	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3142922-3143514	Cluster_5478	Pocillopora_meandrina_HIv1___Sc0000023	3142922	3143514	593	1760	336	0.7051136363636363	.	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCA	195	20	1619	17	10	24	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3160642-3161069	Cluster_5479	Pocillopora_meandrina_HIv1___Sc0000023	3160642	3161069	428	186	75	0.9032258064516129	+	UGAUGCCGAGAAGUCUGCUCUCCUGAGU	29	3	180	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3235979-3236407	Cluster_5480	Pocillopora_meandrina_HIv1___Sc0000023	3235979	3236407	429	176	55	0.8977272727272727	+	UGCUUUAGUCACAGACUUUGCACCUGAAA	57	5	167	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3237033-3237463	Cluster_5481	Pocillopora_meandrina_HIv1___Sc0000023	3237033	3237463	431	673	210	0.9791976225854383	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	183	1	655	1	3	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3237511-3238229	Cluster_5482	Pocillopora_meandrina_HIv1___Sc0000023	3237511	3238229	719	498	258	0.9337349397590361	+	UCUUCUACCGAAUAAUCGCUGAACAGGU	25	4	461	2	1	6	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3239517-3239952	Cluster_5483	Pocillopora_meandrina_HIv1___Sc0000023	3239517	3239952	436	256	110	0.9453125	+	UACAGACUUAUCAAUCUCGAGGUGA	28	3	234	0	1	13	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3240558-3241059	Cluster_5484	Pocillopora_meandrina_HIv1___Sc0000023	3240558	3241059	502	356	210	0.8089887640449438	+	UCUAUCACUUUGUCGAUGUCGGUUUUCUC	10	8	292	5	4	12	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3309178-3309773	Cluster_5485	Pocillopora_meandrina_HIv1___Sc0000023	3309178	3309773	596	293	136	0.4812286689419795	.	UGCAUUCUUUGUGGCGUACGUUCUGCUU	25	2	280	3	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3394590-3395020	Cluster_5486	Pocillopora_meandrina_HIv1___Sc0000023	3394590	3395020	431	224	50	0.013392857142857142	-	GCUUGGUUGAUAUUUGUACAAAAUUGAAAUA	60	3	216	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3409023-3409451	Cluster_5487	Pocillopora_meandrina_HIv1___Sc0000023	3409023	3409451	429	147	75	0.02040816326530612	-	UUGGACGUAGAUGUUUGUUUACAUCGUG	21	0	142	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3409792-3410220	Cluster_5488	Pocillopora_meandrina_HIv1___Sc0000023	3409792	3410220	429	131	61	0.05343511450381679	-	UGUUUACUUUCUUUACAACUUCGGAUACGUG	27	0	127	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3436895-3437312	Cluster_5489	Pocillopora_meandrina_HIv1___Sc0000023	3436895	3437312	418	191	3	1.0	+	UGGCCUGAAAAAAAAAAA	186	191	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3471890-3472332	Cluster_5490	Pocillopora_meandrina_HIv1___Sc0000023	3471890	3472332	443	314	89	0.6751592356687898	.	UGAAGUAAGCACCCUGGUCUCUGCCAAG	79	2	299	0	3	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3700809-3701236	Cluster_5491	Pocillopora_meandrina_HIv1___Sc0000023	3700809	3701236	428	214	92	0.14953271028037382	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	47	6	186	2	3	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3723474-3723972	Cluster_5492	Pocillopora_meandrina_HIv1___Sc0000023	3723474	3723972	499	4628	322	0.9941659464131374	+	UGCUUCUCGAUUCACAUUUUCAUUCUGC	1108	10	4584	7	6	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3781649-3782074	Cluster_5493	Pocillopora_meandrina_HIv1___Sc0000023	3781649	3782074	426	165	107	0.09090909090909091	-	UACAGACAUAAGAGUUUUUGUUUACCGGAG	9	0	148	1	3	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3791717-3792146	Cluster_5494	Pocillopora_meandrina_HIv1___Sc0000023	3791717	3792146	430	305	121	0.1377049180327869	-	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	32	15	269	4	3	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3933283-3934530	Cluster_5495	Pocillopora_meandrina_HIv1___Sc0000023	3933283	3934530	1248	894	394	0.6879194630872483	.	UUGGAUUGUAAUAAGGUACAAGAGGCUG	50	14	716	6	15	101	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3936607-3937027	Cluster_5496	Pocillopora_meandrina_HIv1___Sc0000023	3936607	3937027	421	179	80	0.1005586592178771	-	UCAGUGAUCAUGGAAAUUUCGUG	22	2	109	29	2	35	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3938983-3939411	Cluster_5497	Pocillopora_meandrina_HIv1___Sc0000023	3938983	3939411	429	145	35	0.3103448275862069	.	UAAAGAGGACUGAUAAUCUCAGGUUAUC	37	1	115	0	3	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3939486-3939910	Cluster_5498	Pocillopora_meandrina_HIv1___Sc0000023	3939486	3939910	425	193	55	0.015544041450777202	-	UGCCGUGGAAAGGUUAAUCUCGAGG	44	4	125	0	16	14	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4040027-4040521	Cluster_5499	Pocillopora_meandrina_HIv1___Sc0000023	4040027	4040521	495	213	94	0.7887323943661971	.	UGUAAGACGCACUCUACUCUGUUGU	38	20	168	5	5	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4040697-4041185	Cluster_5500	Pocillopora_meandrina_HIv1___Sc0000023	4040697	4041185	489	2014	165	0.12959285004965243	-	UUAACUCCACGGUGCCAAUGACUUUCUU	503	18	1915	15	7	27	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4042470-4042969	Cluster_5501	Pocillopora_meandrina_HIv1___Sc0000023	4042470	4042969	500	363	151	0.8567493112947658	+	UUGGAACGUGUUGCUGAACGCUUGCU	42	20	320	4	4	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4398620-4399040	Cluster_5502	Pocillopora_meandrina_HIv1___Sc0000023	4398620	4399040	421	68	5	1.0	+	UCUGACGAAGGGCUGACACUU	63	0	0	68	0	0	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4466900-4467330	Cluster_5503	Pocillopora_meandrina_HIv1___Sc0000023	4466900	4467330	431	868	78	0.009216589861751152	-	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	290	0	857	0	1	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4544171-4544592	Cluster_5504	Pocillopora_meandrina_HIv1___Sc0000023	4544171	4544592	422	73	5	0.9726027397260274	+	UCUGACGAAGGGCUGACACUCG	68	1	1	1	68	2	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4579508-4579938	Cluster_5505	Pocillopora_meandrina_HIv1___Sc0000023	4579508	4579938	431	92	36	0.07608695652173914	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	25	0	88	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4681114-4681542	Cluster_5506	Pocillopora_meandrina_HIv1___Sc0000023	4681114	4681542	429	227	43	1.0	+	CGCGGAAAGAGGGGAAAUUGCACUCUCCC	34	19	183	2	5	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4714493-4714932	Cluster_5507	Pocillopora_meandrina_HIv1___Sc0000023	4714493	4714932	440	268	130	0.996268656716418	+	AGAUUGAACCACCCAUAGGCUGAUA	23	29	178	15	11	17	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4716503-4716988	Cluster_5508	Pocillopora_meandrina_HIv1___Sc0000023	4716503	4716988	486	585	225	1.0	+	GAGAAAUGAUGACAGAAU	49	149	344	33	18	13	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4794386-4794809	Cluster_5509	Pocillopora_meandrina_HIv1___Sc0000023	4794386	4794809	424	25066	190	3.989467804994814e-05	-	UGUCUGUGAGAAUUUAGCUCGU	13475	1017	24	261	21455	2043	266	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5048164-5048843	Cluster_5510	Pocillopora_meandrina_HIv1___Sc0000023	5048164	5048843	680	596	196	0.8271812080536913	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	117	16	551	1	3	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5063417-5063846	Cluster_5511	Pocillopora_meandrina_HIv1___Sc0000023	5063417	5063846	430	235	58	0.00425531914893617	-	UGUUAAUCGAGAGAAGCAUAGACGCAAAUC	85	0	229	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5256083-5256502	Cluster_5512	Pocillopora_meandrina_HIv1___Sc0000023	5256083	5256502	420	211	14	1.0	+	AUUGUGGUUUUGAUCUUUUU	77	185	0	25	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5493397-5493824	Cluster_5513	Pocillopora_meandrina_HIv1___Sc0000023	5493397	5493824	428	176	51	1.0	+	UCUUGAAGCCUUGUCAGCUGGUCUGCCU	23	3	169	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5528711-5529439	Cluster_5514	Pocillopora_meandrina_HIv1___Sc0000023	5528711	5529439	729	205	98	0.9902439024390244	+	UGCUCAUAUCUAAUAGAACUACUGCCGUU	19	1	201	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5719271-5721819	Cluster_5515	Pocillopora_meandrina_HIv1___Sc0000023	5719271	5721819	2549	10534	2558	0.1760015188912094	-	UGCAGUGAAUGGAGAGAUCUGACAUCAGUC	694	145	9280	68	66	318	657	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5721883-5722297	Cluster_5516	Pocillopora_meandrina_HIv1___Sc0000023	5721883	5722297	415	123	67	0.04065040650406504	-	UUGUUAGAAACUGUUUCAAUGAAAUA	9	3	112	0	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:147469-147898	Cluster_5517	Pocillopora_meandrina_HIv1___Sc0000024	147469	147898	430	1189	21	0.9957947855340622	+	UGUGAUGUAGAUUGCAACAUUUCGACUGC	519	1	1183	2	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:210383-212120	Cluster_5518	Pocillopora_meandrina_HIv1___Sc0000024	210383	212120	1738	2488	1043	0.04662379421221865	-	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	86	16	2359	14	27	35	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:467347-467772	Cluster_5519	Pocillopora_meandrina_HIv1___Sc0000024	467347	467772	426	100	38	0.02	-	UGUGUAGAUAUGUCUUUUGGACAGGA	29	1	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:704424-704956	Cluster_5520	Pocillopora_meandrina_HIv1___Sc0000024	704424	704956	533	1549	341	0.07876049063912201	-	UCCUCGCUAAGAAUUCUUAUUUCGUCG	182	14	1410	22	39	26	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:705080-706057	Cluster_5521	Pocillopora_meandrina_HIv1___Sc0000024	705080	706057	978	1110	400	0.7009009009009008	.	UAACUUCUUGGCUGAUUUAAAAUUUAUGUC	59	5	1052	3	4	17	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:776195-776622	Cluster_5522	Pocillopora_meandrina_HIv1___Sc0000024	776195	776622	428	204	79	0.9754901960784313	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	34	2	198	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:777922-778325	Cluster_5523	Pocillopora_meandrina_HIv1___Sc0000024	777922	778325	404	75	34	0.96	+	UGAACUUGAACUAUUUGCUGGAGACGAAAG	21	2	71	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:778549-778961	Cluster_5524	Pocillopora_meandrina_HIv1___Sc0000024	778549	778961	413	140	81	0.7857142857142857	.	UGGUUAUGUAAAUGAGGUUUCCUGUGAAGG	20	1	126	2	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:956651-957078	Cluster_5525	Pocillopora_meandrina_HIv1___Sc0000024	956651	957078	428	132	34	0.007575757575757576	-	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	25	0	132	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1007371-1007818	Cluster_5526	Pocillopora_meandrina_HIv1___Sc0000024	1007371	1007818	448	429	103	0.5431235431235432	.	AUAGCUCGAACGAGGACUCGUCCUUAACA	73	5	375	5	3	7	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1008128-1008555	Cluster_5527	Pocillopora_meandrina_HIv1___Sc0000024	1008128	1008555	428	211	39	0.009478672985781991	-	UGGUAAACUUCCCUAACAUUGGCCUGUG	44	0	210	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1010264-1010698	Cluster_5528	Pocillopora_meandrina_HIv1___Sc0000024	1010264	1010698	435	4525	267	0.00574585635359116	-	UUGUUUACCUCUUGUCGUCUCUUAGUUUG	969	10	4436	3	30	36	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1010708-1011221	Cluster_5529	Pocillopora_meandrina_HIv1___Sc0000024	1010708	1011221	514	978	277	0.07770961145194274	-	UUCUUCUUUGGCCUCUCUGAGUCUGAGC	97	7	939	1	4	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1094343-1094767	Cluster_5530	Pocillopora_meandrina_HIv1___Sc0000024	1094343	1094767	425	94	32	0.031914893617021274	-	UGUGUAGAUAUGUCUUUUGGACAGGA	31	3	89	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1592893-1594711	Cluster_5531	Pocillopora_meandrina_HIv1___Sc0000024	1592893	1594711	1819	1449	622	0.971704623878537	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	95	20	1375	6	4	24	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1596077-1597128	Cluster_5532	Pocillopora_meandrina_HIv1___Sc0000024	1596077	1597128	1052	948	383	0.9620253164556962	+	UAACAUCUCUCUUUCCGACUUUAACAGC	52	7	901	6	8	15	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1597181-1597684	Cluster_5533	Pocillopora_meandrina_HIv1___Sc0000024	1597181	1597684	504	556	197	0.9388489208633094	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	94	9	527	2	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1597714-1598249	Cluster_5534	Pocillopora_meandrina_HIv1___Sc0000024	1597714	1598249	536	712	303	0.9283707865168539	+	UGUGAACCGAAUUUCUGUGAUCGCUCCAGUU	37	8	657	4	7	11	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1598368-1598861	Cluster_5535	Pocillopora_meandrina_HIv1___Sc0000024	1598368	1598861	494	473	263	0.8477801268498943	+	UGUUCCGGUACAAAUUUUCCCUGCAUA	17	6	422	1	5	9	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1737905-1738332	Cluster_5536	Pocillopora_meandrina_HIv1___Sc0000024	1737905	1738332	428	103	10	0.0	-	UAACCCGAGAACUGACACGUGAGUAGUC	67	7	85	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1742427-1742854	Cluster_5537	Pocillopora_meandrina_HIv1___Sc0000024	1742427	1742854	428	96	15	0.010416666666666666	-	UAACCCGAGAACUGACACGUGAGUAGUC	63	1	87	1	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1971890-1972477	Cluster_5538	Pocillopora_meandrina_HIv1___Sc0000024	1971890	1972477	588	207	65	0.9806763285024155	+	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	34	0	200	2	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1972818-1973250	Cluster_5539	Pocillopora_meandrina_HIv1___Sc0000024	1972818	1973250	433	639	154	0.8904538341158059	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	111	3	619	0	8	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1975327-1975861	Cluster_5540	Pocillopora_meandrina_HIv1___Sc0000024	1975327	1975861	535	642	131	0.9719626168224299	+	UCAGACUGUGCAUAACCAUUUGCAAACG	87	2	596	1	10	12	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1988580-1989093	Cluster_5541	Pocillopora_meandrina_HIv1___Sc0000024	1988580	1989093	514	3036	175	0.9225955204216074	+	UUGUCUAGUAUUGACCUUGUGACUUGUGC	1430	8	3006	11	4	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2043021-2044270	Cluster_5542	Pocillopora_meandrina_HIv1___Sc0000024	2043021	2044270	1250	5929	1175	0.21302074548827796	.	UCUCCAGGAUUUAAAUACUCGAAAAUGG	377	42	5422	16	24	90	335	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2122924-2124411	Cluster_5543	Pocillopora_meandrina_HIv1___Sc0000024	2122924	2124411	1488	10489	1994	0.05186385737439222	-	UCGACGAUCUUAAAAUCCUUUCCUUCUU	774	122	9903	53	44	144	223	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2257156-2257583	Cluster_5544	Pocillopora_meandrina_HIv1___Sc0000024	2257156	2257583	428	174	73	0.022988505747126436	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	22	0	163	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2388554-2388980	Cluster_5545	Pocillopora_meandrina_HIv1___Sc0000024	2388554	2388980	427	100	20	1.0	+	UGAACUACUGCUCGUACUCUAGAUAUG	39	4	96	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2467311-2467738	Cluster_5546	Pocillopora_meandrina_HIv1___Sc0000024	2467311	2467738	428	193	96	0.09326424870466321	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	19	1	183	2	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2584993-2585605	Cluster_5547	Pocillopora_meandrina_HIv1___Sc0000024	2584993	2585605	613	936	163	0.04700854700854701	-	UGGUAAAAUUCUGUUCAAAGUAGGUGU	145	6	807	94	9	1	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2629691-2630637	Cluster_5548	Pocillopora_meandrina_HIv1___Sc0000024	2629691	2630637	947	760	188	0.06315789473684211	-	UGUGACAGCUCUUUUCCUCCUGCAAAGAAG	137	17	719	8	2	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2645175-2645598	Cluster_5549	Pocillopora_meandrina_HIv1___Sc0000024	2645175	2645598	424	90	38	0.9777777777777777	+	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	17	1	86	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2645964-2646399	Cluster_5550	Pocillopora_meandrina_HIv1___Sc0000024	2645964	2646399	436	262	90	0.7175572519083969	.	UCUGACCAAUUAAUUAUUUUCUGUACCACA	51	3	185	1	3	19	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2695899-2697393	Cluster_5551	Pocillopora_meandrina_HIv1___Sc0000024	2695899	2697393	1495	15103	2664	0.7363437727603788	.	UGAUAGAACAAAUUCUGAUUUACAGGUG	674	141	13757	91	134	419	561	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2852508-2853971	Cluster_5552	Pocillopora_meandrina_HIv1___Sc0000024	2852508	2853971	1464	11142	1237	0.09271225991742954	-	UGCAGAUUGCCCUGACACGAAAUAUCGUC	1945	107	10041	256	208	244	286	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2854893-2855297	Cluster_5553	Pocillopora_meandrina_HIv1___Sc0000024	2854893	2855297	405	181	115	0.14917127071823205	-	UACUUCUAACAGCGUUUCUUUUAGCUCU	9	6	153	0	4	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2856088-2856516	Cluster_5554	Pocillopora_meandrina_HIv1___Sc0000024	2856088	2856516	429	414	99	0.00966183574879227	-	UGUAGAAUCAAUCUGUUACUAAGACACC	102	3	398	6	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2868577-2869002	Cluster_5555	Pocillopora_meandrina_HIv1___Sc0000024	2868577	2869002	426	219	92	0.2648401826484018	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	27	6	199	4	4	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2869813-2870498	Cluster_5556	Pocillopora_meandrina_HIv1___Sc0000024	2869813	2870498	686	437	272	0.19908466819221968	-	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	30	1	376	4	3	14	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2872254-2872681	Cluster_5557	Pocillopora_meandrina_HIv1___Sc0000024	2872254	2872681	428	168	69	0.041666666666666664	-	UAUACACGUUUAGGAUCUUCAUUUUUGA	69	1	162	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2879631-2880057	Cluster_5558	Pocillopora_meandrina_HIv1___Sc0000024	2879631	2880057	427	177	62	0.1694915254237288	-	UGUCAAAUUCUCGUCUUCCUAACCUUU	67	1	169	0	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2882444-2882854	Cluster_5559	Pocillopora_meandrina_HIv1___Sc0000024	2882444	2882854	411	87	36	0.5517241379310345	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	22	0	86	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2886024-2886449	Cluster_5560	Pocillopora_meandrina_HIv1___Sc0000024	2886024	2886449	426	180	76	0.016666666666666666	-	UGUUCUCUAGAUGUUGCUGACACUUGUC	17	0	173	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2888072-2888500	Cluster_5561	Pocillopora_meandrina_HIv1___Sc0000024	2888072	2888500	429	181	37	0.016574585635359115	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	79	1	179	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2888789-2889209	Cluster_5562	Pocillopora_meandrina_HIv1___Sc0000024	2888789	2889209	421	140	60	0.0	-	UCUAUCCCACCUGUAAUGAAAAAAUCUUUGU	20	0	138	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2889642-2890085	Cluster_5563	Pocillopora_meandrina_HIv1___Sc0000024	2889642	2890085	444	837	145	0.02031063321385902	-	UGUGAAACUCUGGAACUCAACAAUUCC	183	9	789	17	3	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2893306-2894396	Cluster_5564	Pocillopora_meandrina_HIv1___Sc0000024	2893306	2894396	1091	2055	467	0.11581508515815085	-	UAAUGUGAAUUUUUGGAUCAUUGGUUGUG	169	22	1961	6	8	17	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2894482-2894908	Cluster_5565	Pocillopora_meandrina_HIv1___Sc0000024	2894482	2894908	427	365	99	0.09315068493150686	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	86	3	344	3	0	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2904527-2905081	Cluster_5566	Pocillopora_meandrina_HIv1___Sc0000024	2904527	2905081	555	513	148	0.6374269005847953	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	62	4	470	6	1	19	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2909145-2911796	Cluster_5567	Pocillopora_meandrina_HIv1___Sc0000024	2909145	2911796	2652	14449	2636	0.10872724756038481	-	UUAUAUGUUUCUCUAAUUCUGCACGAGU	913	165	13507	95	78	182	422	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2912380-2914163	Cluster_5568	Pocillopora_meandrina_HIv1___Sc0000024	2912380	2914163	1784	4126	1243	0.9367426078526417	+	UGAUCUUGUAACAAUUUCCCUGUCAGA	412	54	3931	18	18	38	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2919102-2919605	Cluster_5569	Pocillopora_meandrina_HIv1___Sc0000024	2919102	2919605	504	526	253	0.3403041825095057	.	UUAGAUCUUCAUUAUGCUGUUUAGCCUG	24	2	492	1	3	11	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2920383-2920796	Cluster_5570	Pocillopora_meandrina_HIv1___Sc0000024	2920383	2920796	414	127	43	0.0	-	UCGGAUGUCUUCCCAUAAUUUGCUUUGAGA	39	3	123	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2921044-2921472	Cluster_5571	Pocillopora_meandrina_HIv1___Sc0000024	2921044	2921472	429	123	51	0.008130081300813009	-	UGACUAACCAUGACCAAGACUGAUCAUAUU	49	2	120	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2923270-2924756	Cluster_5572	Pocillopora_meandrina_HIv1___Sc0000024	2923270	2924756	1487	131273	3127	0.0002818553701065718	-	UGCGUUUCUGGUAGACUUAUGUUUUGAAA	25322	1075	124975	725	934	1725	1839	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2925030-2926622	Cluster_5573	Pocillopora_meandrina_HIv1___Sc0000024	2925030	2926622	1593	1666	637	0.0	-	UCGGUAUUUUCUGCAAGAAACAGCAAGAGA	80	22	1595	10	12	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2927287-2927864	Cluster_5574	Pocillopora_meandrina_HIv1___Sc0000024	2927287	2927864	578	600	235	0.013333333333333334	-	UCCCGGUAAUCACUCAAAGAAUAAUGAGA	68	8	571	4	6	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2928128-2928571	Cluster_5575	Pocillopora_meandrina_HIv1___Sc0000024	2928128	2928571	444	2870	239	0.003484320557491289	-	UUAAGAUUAAUUGAUAGGAGAAGUAAAUU	1306	16	2797	16	7	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2928770-2929205	Cluster_5576	Pocillopora_meandrina_HIv1___Sc0000024	2928770	2929205	436	286	150	0.045454545454545456	-	UGACUAAUGAAUAUGAAAGACGGAUGCGGGU	15	6	270	4	1	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2929949-2930654	Cluster_5577	Pocillopora_meandrina_HIv1___Sc0000024	2929949	2930654	706	541	255	0.0	-	UGAUUUUAGCAGACUGGGUGGCUCCUA	54	6	520	1	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2930984-2932095	Cluster_5578	Pocillopora_meandrina_HIv1___Sc0000024	2930984	2932095	1112	577	252	0.0	-	UACAACCUUGACCGUUUUACCUCUGAAUAGU	32	20	528	3	5	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2932911-2934246	Cluster_5579	Pocillopora_meandrina_HIv1___Sc0000024	2932911	2934246	1336	33104	1776	0.00033228612856452393	-	UGUGGAUAAUUUAAUAACUGCAGUAAGGAUG	3729	275	29223	358	244	2498	506	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2935134-2936135	Cluster_5580	Pocillopora_meandrina_HIv1___Sc0000024	2935134	2936135	1002	81006	1474	0.0002345505271214478	-	UCAGACUCACUGAAGGUACCGCUUGAAGUA	23134	149	80579	48	65	78	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2938496-2938922	Cluster_5581	Pocillopora_meandrina_HIv1___Sc0000024	2938496	2938922	427	113	24	0.0	-	CUCUGCUGACUGCAGGACCUUCCUUGC	61	0	112	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2939249-2939713	Cluster_5582	Pocillopora_meandrina_HIv1___Sc0000024	2939249	2939713	465	5552	279	0.00036023054755043225	-	UAGACUGUUUCCGCCCGUUGUAUGUGUAC	1229	13	5517	4	5	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2939960-2940388	Cluster_5583	Pocillopora_meandrina_HIv1___Sc0000024	2939960	2940388	429	144	48	0.0	-	UGGACUUUGAACCGCAGACCAUGCUGUUUG	23	2	142	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2940579-2941092	Cluster_5584	Pocillopora_meandrina_HIv1___Sc0000024	2940579	2941092	514	498	212	0.0	-	UCAGGUCUGUCUUCCUCUGCUACAAGC	26	2	482	3	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2943422-2943998	Cluster_5585	Pocillopora_meandrina_HIv1___Sc0000024	2943422	2943998	577	320	125	0.0	-	UGUUUGACUGCACAAUUCCUUACUGCACA	41	4	303	2	4	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2944852-2946316	Cluster_5586	Pocillopora_meandrina_HIv1___Sc0000024	2944852	2946316	1465	6017	1047	0.004487286022935018	-	UCUUUGUUUACCCCAGUUCUGUUUAACU	509	54	5782	14	22	58	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2946412-2947417	Cluster_5587	Pocillopora_meandrina_HIv1___Sc0000024	2946412	2947417	1006	3094	639	0.0006464124111182935	-	UGUGUCUUUGCCAGUGUGCAACUCUGUGCUC	182	22	3005	7	8	25	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2947616-2948039	Cluster_5588	Pocillopora_meandrina_HIv1___Sc0000024	2947616	2948039	424	108	56	0.0	-	UGAUAUUUUAACUUUCAUUUUAGUAGUGC	10	1	96	0	1	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2948126-2948556	Cluster_5589	Pocillopora_meandrina_HIv1___Sc0000024	2948126	2948556	431	271	111	0.0	-	AAAGAGCUGAUUUGUUAUUGAAGGUUAAC	27	7	261	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2949353-2950434	Cluster_5590	Pocillopora_meandrina_HIv1___Sc0000024	2949353	2950434	1082	2282	376	0.019281332164767746	-	AGGUAUAGGUUACUCAAGAUUAAUUGAU	228	13	2170	26	3	12	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2951221-2951636	Cluster_5591	Pocillopora_meandrina_HIv1___Sc0000024	2951221	2951636	416	192	110	0.0	-	UGGAGUCUCUUCCCUGUUCUCUGCUUAAG	13	2	175	0	5	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2951808-2952697	Cluster_5592	Pocillopora_meandrina_HIv1___Sc0000024	2951808	2952697	890	944	306	0.00211864406779661	-	UGGUUCACUUCUUUAGCACACACAUCAAGA	93	22	893	7	3	13	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2953520-2955247	Cluster_5593	Pocillopora_meandrina_HIv1___Sc0000024	2953520	2955247	1728	15745	1429	0.00031756113051762465	-	UGAUUAAGCUCCUCUAGUUCUCGGCAGC	2430	127	14777	56	161	467	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2955585-2956354	Cluster_5594	Pocillopora_meandrina_HIv1___Sc0000024	2955585	2956354	770	1023	384	0.0039100684261974585	-	UAAGACAAAUGGGGCUUAUGGCAAUGACC	120	12	986	3	10	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2956919-2957505	Cluster_5595	Pocillopora_meandrina_HIv1___Sc0000024	2956919	2957505	587	474	209	0.0	-	UGUGAUUUGUUAUUACCUAUGGUGGGAUU	33	4	455	0	4	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2957673-2959754	Cluster_5596	Pocillopora_meandrina_HIv1___Sc0000024	2957673	2959754	2082	4390	1277	0.002277904328018223	-	AGCAGCAAAUCACACUACGUGCACUCAAC	696	61	4214	8	30	35	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2961624-2962054	Cluster_5597	Pocillopora_meandrina_HIv1___Sc0000024	2961624	2962054	431	423	99	0.002364066193853428	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	154	2	416	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2962808-2963480	Cluster_5598	Pocillopora_meandrina_HIv1___Sc0000024	2962808	2963480	673	2151	642	0.12459321245932124	-	UGUGCGUGUUUUCACUGCGGCGACUGUCGC	206	45	1816	22	22	64	182	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2964138-2964604	Cluster_5599	Pocillopora_meandrina_HIv1___Sc0000024	2964138	2964604	467	414	231	0.0	-	UGUGCGUUUCCCCUGCAGAGGACUUUGU	19	7	394	1	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3011473-3011900	Cluster_5600	Pocillopora_meandrina_HIv1___Sc0000024	3011473	3011900	428	160	26	0.975	+	UAGGAAAUAAAAAACGGAGAAGCAAUUA	46	2	151	4	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3012456-3012892	Cluster_5601	Pocillopora_meandrina_HIv1___Sc0000024	3012456	3012892	437	363	164	0.027548209366391185	-	UGAAUUCUGCCAGAAUCUCUUCGUCUGUC	23	1	347	9	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3026184-3026614	Cluster_5602	Pocillopora_meandrina_HIv1___Sc0000024	3026184	3026614	431	1143	9	0.0017497812773403325	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	1122	0	1141	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3303903-3304324	Cluster_5603	Pocillopora_meandrina_HIv1___Sc0000024	3303903	3304324	422	151	71	0.6357615894039735	.	UACGUUGGUAAUAUUUUGCUUCUCGGCA	24	0	146	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3340389-3340814	Cluster_5604	Pocillopora_meandrina_HIv1___Sc0000024	3340389	3340814	426	2687	127	0.0018608113137327876	-	UCUCUCAUUGCUUUGCACGAAUUAG	1318	43	2279	14	16	322	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3341706-3342134	Cluster_5605	Pocillopora_meandrina_HIv1___Sc0000024	3341706	3342134	429	587	26	0.0	-	UGAACUCUUGAACAGUCAUGUGUG	273	8	105	6	178	17	273	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3418565-3421305	Cluster_5606	Pocillopora_meandrina_HIv1___Sc0000024	3418565	3421305	2741	9694	1894	0.9794718382504642	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1554	85	9305	25	84	99	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3513700-3514146	Cluster_5607	Pocillopora_meandrina_HIv1___Sc0000024	3513700	3514146	447	341	267	0.0967741935483871	-	GAAGAGACAAGGUCGCACUCUGUACGGCUU	7	100	163	31	25	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3537929-3538348	Cluster_5608	Pocillopora_meandrina_HIv1___Sc0000024	3537929	3538348	420	74	23	1.0	+	CAGCUGGUGCUCAGUUAGGUUAGU	37	0	6	9	1	5	53	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3627745-3628216	Cluster_5609	Pocillopora_meandrina_HIv1___Sc0000024	3627745	3628216	472	2651	194	0.967182195397963	+	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	1421	4	2622	5	2	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3838747-3839209	Cluster_5610	Pocillopora_meandrina_HIv1___Sc0000024	3838747	3839209	463	469	138	0.8123667377398721	+	UAGUCGACUGAAUUGCUCCGUGUAAGAGG	46	11	419	4	2	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3842999-3843408	Cluster_5611	Pocillopora_meandrina_HIv1___Sc0000024	3842999	3843408	410	149	91	0.8993288590604027	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	17	0	144	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3896813-3898219	Cluster_5612	Pocillopora_meandrina_HIv1___Sc0000024	3896813	3898219	1407	5153	636	0.01843586260430817	-	UAUGAUCUUACAAGAACUGAACUGUGUA	819	2	5087	1	7	20	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4039267-4040045	Cluster_5613	Pocillopora_meandrina_HIv1___Sc0000024	4039267	4040045	779	611	244	0.7201309328968903	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	48	5	556	2	5	16	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4056716-4057308	Cluster_5614	Pocillopora_meandrina_HIv1___Sc0000024	4056716	4057308	593	5397	545	0.6712988697424495	.	UCGACAUCGUCAAUGCACUCUUUGCGCG	405	103	4074	71	26	97	1026	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4058901-4059332	Cluster_5615	Pocillopora_meandrina_HIv1___Sc0000024	4058901	4059332	432	2843	94	0.9852268730214562	+	UGAAUGCUGGUAUCUUGAUAGUAGAACA	2523	2	2838	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4078778-4079178	Cluster_5616	Pocillopora_meandrina_HIv1___Sc0000024	4078778	4079178	401	94	40	0.5212765957446809	.	UAUGAUCAAAUUGUUAGUAUUGAAUAAGUU	20	2	91	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4083654-4086648	Cluster_5617	Pocillopora_meandrina_HIv1___Sc0000024	4083654	4086648	2995	21091	3435	0.10336162344127826	-	UGAUUUCCACUGAUCGGCUGUGAAGCCCC	1100	143	19060	83	220	422	1163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4088542-4088951	Cluster_5618	Pocillopora_meandrina_HIv1___Sc0000024	4088542	4088951	410	184	119	0.3695652173913043	.	ACGCGAACGAACUGUGCUCUUAUUGCAAC	10	2	170	2	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4093656-4094411	Cluster_5619	Pocillopora_meandrina_HIv1___Sc0000024	4093656	4094411	756	6689	648	0.5701898639557482	.	CCUCUUCUUAUUGGGAUGUGUACUCUUUC	1324	30	6389	26	31	97	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4106599-4107398	Cluster_5620	Pocillopora_meandrina_HIv1___Sc0000024	4106599	4107398	800	427	236	0.8875878220140515	+	UGAUUUAUGAGGACAAAUUUGAAGCCAG	18	5	381	2	3	12	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4127709-4128273	Cluster_5621	Pocillopora_meandrina_HIv1___Sc0000024	4127709	4128273	565	582	180	0.9450171821305842	+	UGAUUAGAAUCGGGAACAACCA	99	6	446	4	103	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4161863-4162312	Cluster_5622	Pocillopora_meandrina_HIv1___Sc0000024	4161863	4162312	450	695	235	0.09064748201438849	-	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	125	5	625	4	9	10	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4162817-4163523	Cluster_5623	Pocillopora_meandrina_HIv1___Sc0000024	4162817	4163523	707	307	149	0.03908794788273615	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	32	4	279	1	2	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4165577-4166007	Cluster_5624	Pocillopora_meandrina_HIv1___Sc0000024	4165577	4166007	431	717	205	0.00697350069735007	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	174	1	705	1	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4169261-4169681	Cluster_5625	Pocillopora_meandrina_HIv1___Sc0000024	4169261	4169681	421	223	125	0.6591928251121076	.	UGUGACACUUUGAGACACUCGUGAGACA	15	2	195	2	3	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4201910-4202459	Cluster_5626	Pocillopora_meandrina_HIv1___Sc0000024	4201910	4202459	550	640	161	0.0078125	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	93	1	627	0	0	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4207684-4208168	Cluster_5627	Pocillopora_meandrina_HIv1___Sc0000024	4207684	4208168	485	511	161	0.8767123287671232	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	142	1	506	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4208466-4208893	Cluster_5628	Pocillopora_meandrina_HIv1___Sc0000024	4208466	4208893	428	148	44	0.9594594594594594	+	UGGAAUUCGAAGCAAGUAACAAUGGACA	24	1	132	5	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4211041-4211469	Cluster_5629	Pocillopora_meandrina_HIv1___Sc0000024	4211041	4211469	429	321	72	0.021806853582554516	-	UAGGACAACUGAGAAUCCACGUAGACUC	107	0	312	1	5	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4386992-4387398	Cluster_5630	Pocillopora_meandrina_HIv1___Sc0000024	4386992	4387398	407	109	64	0.1651376146788991	-	AAGGUCUGUUGAGCUGCACAAUCUCAGG	12	2	103	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4387783-4388207	Cluster_5631	Pocillopora_meandrina_HIv1___Sc0000024	4387783	4388207	425	95	43	0.0	-	UUCUGUGAUAUGGAGGUGCUAUCGUCCGU	13	2	89	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4472787-4473204	Cluster_5632	Pocillopora_meandrina_HIv1___Sc0000024	4472787	4473204	418	104	11	0.009615384615384616	-	GAAGUUCUGGUUUAAAAA	89	100	2	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4490178-4490607	Cluster_5633	Pocillopora_meandrina_HIv1___Sc0000024	4490178	4490607	430	215	91	0.986046511627907	+	UACAAUGAAUACUGUUCCAGAAUUAAGGGC	51	2	204	3	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4543520-4543968	Cluster_5634	Pocillopora_meandrina_HIv1___Sc0000024	4543520	4543968	449	1999	199	0.03151575787893947	-	CGAUCCAACAAGAACAAUAUGUGCAGACU	418	8	1895	6	1	21	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4629024-4629867	Cluster_5635	Pocillopora_meandrina_HIv1___Sc0000024	4629024	4629867	844	1493	870	0.9986604152712659	+	UAGGGUUGCCCCAGAGGAACA	16	458	612	128	113	92	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4630626-4631873	Cluster_5636	Pocillopora_meandrina_HIv1___Sc0000024	4630626	4631873	1248	4055	2250	1.0	+	ACCGACUACUUGAUGAAGAUCUUGAC	39	995	1712	324	387	302	335	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4692847-4693265	Cluster_5637	Pocillopora_meandrina_HIv1___Sc0000024	4692847	4693265	419	101	34	0.0	-	AAAGGAAUUAGGACUCUGG	14	42	34	5	5	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4699114-4699771	Cluster_5638	Pocillopora_meandrina_HIv1___Sc0000024	4699114	4699771	658	2946	270	0.9439918533604889	+	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	567	1	2908	6	6	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4808666-4808760	Cluster_5639	Pocillopora_meandrina_HIv1___Sc0000024	4808666	4808760	95	3154	144	1.0	+	AGAACCCAAGAAUCUCGA	894	2822	1	301	26	3	1	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000024:4920463-4920901	Cluster_5640	Pocillopora_meandrina_HIv1___Sc0000024	4920463	4920901	439	310	133	0.667741935483871	.	UACUGCAUUUUGGAAAGCUUCGGCUCA	40	6	268	7	0	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4986861-4987297	Cluster_5641	Pocillopora_meandrina_HIv1___Sc0000024	4986861	4987297	437	407	110	0.9312039312039312	+	UCUUCCACUGAUCGUUGAGUUGAAGACUG	50	9	365	9	0	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5009879-5010307	Cluster_5642	Pocillopora_meandrina_HIv1___Sc0000024	5009879	5010307	429	190	95	0.11052631578947368	-	UGAACGUAUAGCCAUCCAGUUGAACUUG	15	1	184	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5010319-5010742	Cluster_5643	Pocillopora_meandrina_HIv1___Sc0000024	5010319	5010742	424	175	118	0.17142857142857143	-	UGACUUUAACACUAUAAACAUUCUGAGG	10	3	155	1	5	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5029510-5029936	Cluster_5644	Pocillopora_meandrina_HIv1___Sc0000024	5029510	5029936	427	125	47	0.992	+	UGAUCCAACAAGAACAAUAUGUGCUGA	36	2	115	0	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5042981-5043408	Cluster_5645	Pocillopora_meandrina_HIv1___Sc0000024	5042981	5043408	428	178	77	0.7359550561797753	.	UAGGAUAUAUCACUUGCGUAAUUUACAACA	26	15	150	3	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5153232-5153738	Cluster_5646	Pocillopora_meandrina_HIv1___Sc0000024	5153232	5153738	507	531	248	0.2937853107344633	.	UGUUCUCGGUUAUCAGCUCAGAAAUGCA	25	26	428	10	6	17	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5154717-5155141	Cluster_5647	Pocillopora_meandrina_HIv1___Sc0000024	5154717	5155141	425	96	35	0.041666666666666664	-	UGUGUAGAUAUGUCUUUUGGACAGGA	30	1	94	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5206554-5207098	Cluster_5648	Pocillopora_meandrina_HIv1___Sc0000024	5206554	5207098	545	2412	328	1.0	+	UAGCAUUGUCGGUAUCUGCAGCU	637	140	598	55	120	1411	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5274612-5275041	Cluster_5649	Pocillopora_meandrina_HIv1___Sc0000024	5274612	5275041	430	306	62	0.9052287581699346	+	UUCUGGUUAUCUUGCGAGAAUUUUGUCACC	87	11	275	9	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:32568-32996	Cluster_5650	Pocillopora_meandrina_HIv1___Sc0000025	32568	32996	429	261	64	0.0	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	47	2	258	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:52012-52437	Cluster_5651	Pocillopora_meandrina_HIv1___Sc0000025	52012	52437	426	134	42	0.13432835820895522	-	UACUGAACUGGCUAGGAUUUGUGCA	23	2	117	0	0	0	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:52665-53245	Cluster_5652	Pocillopora_meandrina_HIv1___Sc0000025	52665	53245	581	377	156	0.22281167108753316	.	UGAACGAUCCAUUUCAGCCACGGCUAAAGUA	17	2	342	1	9	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:57453-62607	Cluster_5653	Pocillopora_meandrina_HIv1___Sc0000025	57453	62607	5155	26252	5496	0.09138351363705623	-	UGUAUUGUUGAAUCUUCUGGUUUGUCGA	1273	455	24036	189	311	508	753	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:65003-65609	Cluster_5654	Pocillopora_meandrina_HIv1___Sc0000025	65003	65609	607	216	65	0.1111111111111111	-	UCGUCUCACGGGCUGCCAAGCGAUGCGG	42	3	183	3	5	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:65671-66099	Cluster_5655	Pocillopora_meandrina_HIv1___Sc0000025	65671	66099	429	226	41	0.004424778761061947	-	UUGGUCAUAAAGCACAUGAAGAACCGC	56	3	222	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:81390-81833	Cluster_5656	Pocillopora_meandrina_HIv1___Sc0000025	81390	81833	444	859	160	0.19324796274738068	-	UCCAGAUCGUUAAGAAAUAUAUUGAACA	231	6	765	3	4	13	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:85045-85474	Cluster_5657	Pocillopora_meandrina_HIv1___Sc0000025	85045	85474	430	121	39	0.0	-	UCAAAACCUUGUUGGCUGUAUUCUCUCAUC	47	1	115	0	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:120662-121091	Cluster_5658	Pocillopora_meandrina_HIv1___Sc0000025	120662	121091	430	1547	199	0.004524886877828055	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	376	0	1531	4	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:132328-132758	Cluster_5659	Pocillopora_meandrina_HIv1___Sc0000025	132328	132758	431	173	61	0.0	-	UGCCUCUUAUAAAACAUAUCGUUAUGCUGUA	59	3	165	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:133277-133808	Cluster_5660	Pocillopora_meandrina_HIv1___Sc0000025	133277	133808	532	1356	358	0.01327433628318584	-	UGAAGGAACGUGUGGCCCCUCACGAGGUA	80	3	1318	3	6	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:134251-134678	Cluster_5661	Pocillopora_meandrina_HIv1___Sc0000025	134251	134678	428	180	66	0.044444444444444446	-	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	38	0	169	0	2	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:137992-138621	Cluster_5662	Pocillopora_meandrina_HIv1___Sc0000025	137992	138621	630	561	245	0.34402852049910876	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	65	5	529	3	3	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:139243-140097	Cluster_5663	Pocillopora_meandrina_HIv1___Sc0000025	139243	140097	855	1315	241	0.9110266159695818	+	CGUGUACGACGCCUCUGCCCGAGCUUCAG	390	11	1267	14	6	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:141460-141886	Cluster_5664	Pocillopora_meandrina_HIv1___Sc0000025	141460	141886	427	204	85	0.22058823529411764	.	UCACGAAUCUUUGCCAUUGUGAGGCUCACU	20	2	192	2	1	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:142044-142477	Cluster_5665	Pocillopora_meandrina_HIv1___Sc0000025	142044	142477	434	380	185	0.3447368421052632	.	UACGUCUAGUAUAACCUCCUCUAACUCGG	22	8	316	6	3	25	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:142480-142918	Cluster_5666	Pocillopora_meandrina_HIv1___Sc0000025	142480	142918	439	266	140	0.2518796992481203	.	UCUAACGGAUACAGCUGCUGUACUGCU	15	21	226	3	5	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:151855-152280	Cluster_5667	Pocillopora_meandrina_HIv1___Sc0000025	151855	152280	426	195	32	0.0	-	UCAGAAUCAAAUUUUUAGCAGUGGGU	95	1	192	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:152606-153036	Cluster_5668	Pocillopora_meandrina_HIv1___Sc0000025	152606	153036	431	270	16	0.011111111111111112	-	UCAGCUCCAUAUCUUGUUUAACAUCUUAAAC	183	0	269	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:153609-154122	Cluster_5669	Pocillopora_meandrina_HIv1___Sc0000025	153609	154122	514	496	67	0.0	-	UCAAAUGACUGUAGUCUCCAGUGCCAAGACU	105	4	492	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:159877-160308	Cluster_5670	Pocillopora_meandrina_HIv1___Sc0000025	159877	160308	432	2170	44	0.0	-	UCCAGAACUUUUUCACGACCCAAAUGUGGUA	1215	4	2161	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:174243-174676	Cluster_5671	Pocillopora_meandrina_HIv1___Sc0000025	174243	174676	434	499	66	0.006012024048096192	-	AACUACUGCUCGUGCUCUAGAUAUGACA	120	13	481	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:177567-177986	Cluster_5672	Pocillopora_meandrina_HIv1___Sc0000025	177567	177986	420	101	36	0.0	-	AAACUGUCUCAUUUCUGUGCGGAUCAUG	23	20	78	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:189065-190401	Cluster_5673	Pocillopora_meandrina_HIv1___Sc0000025	189065	190401	1337	3673	683	0.03566566839096107	-	UCGGGCUUCUUAGCUUUCAAGUCUUUGGGA	541	33	3459	26	35	52	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:197269-197991	Cluster_5674	Pocillopora_meandrina_HIv1___Sc0000025	197269	197991	723	1591	240	0.016341923318667503	-	UGGAAAGUUCUCUGGUAUGCGAGUCAGC	445	15	1536	11	3	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:198895-199356	Cluster_5675	Pocillopora_meandrina_HIv1___Sc0000025	198895	199356	462	1351	147	0.0	-	UGUUGUGGUUUAGGCGUUCUGUAUCUCUAC	267	1	1328	4	2	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:200022-200444	Cluster_5676	Pocillopora_meandrina_HIv1___Sc0000025	200022	200444	423	292	79	0.0684931506849315	-	UCGGUAUAGCUUUCAAAACAGUC	99	6	168	1	1	114	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:215224-215973	Cluster_5677	Pocillopora_meandrina_HIv1___Sc0000025	215224	215973	750	2640	274	0.018560606060606062	-	UCAAUGCUUCUUGUCUGUACCAUCUGUGC	878	4	2623	1	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:309386-309814	Cluster_5678	Pocillopora_meandrina_HIv1___Sc0000025	309386	309814	429	178	42	0.0449438202247191	-	GCCCGACUAGCUCAGUCGGUAGAGCAUGA	66	3	171	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:595825-596251	Cluster_5679	Pocillopora_meandrina_HIv1___Sc0000025	595825	596251	427	263	71	0.9201520912547528	+	UGAAACUCUGAUCUGAAAAUAUUUUC	61	14	210	7	3	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:664697-665127	Cluster_5680	Pocillopora_meandrina_HIv1___Sc0000025	664697	665127	431	1871	144	0.0005344735435595938	-	UCACUCGUAAGUGGUCGCUCGUAAAUACGU	561	8	1803	13	10	31	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:721626-722045	Cluster_5681	Pocillopora_meandrina_HIv1___Sc0000025	721626	722045	420	152	86	0.9342105263157895	+	UCGGGCUAUGUAAACACGGA	15	98	16	21	9	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:733541-733950	Cluster_5682	Pocillopora_meandrina_HIv1___Sc0000025	733541	733950	410	206	123	0.13106796116504854	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	15	0	189	1	2	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:787805-788233	Cluster_5683	Pocillopora_meandrina_HIv1___Sc0000025	787805	788233	429	101	22	0.9801980198019802	+	ACUGGUACAAACAAGGGUCGCGUAGCCUUU	42	4	96	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:816222-816776	Cluster_5684	Pocillopora_meandrina_HIv1___Sc0000025	816222	816776	555	2700	555	0.957037037037037	+	UAUUGUAUCUGAUGUUUUCAAUGGUGUA	376	13	2534	4	20	46	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:816830-817507	Cluster_5685	Pocillopora_meandrina_HIv1___Sc0000025	816830	817507	678	8240	537	0.9972087378640777	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2319	6	8125	5	42	26	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:884368-885561	Cluster_5686	Pocillopora_meandrina_HIv1___Sc0000025	884368	885561	1194	14094	1213	0.02142755782602526	-	UUUGUAGGCUCUAACAGUACAUUGUU	4377	174	13613	48	44	87	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:896573-897169	Cluster_5687	Pocillopora_meandrina_HIv1___Sc0000025	896573	897169	597	5790	485	0.9968911917098445	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	885	14	5733	2	5	12	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1160970-1161596	Cluster_5688	Pocillopora_meandrina_HIv1___Sc0000025	1160970	1161596	627	876	156	0.02511415525114155	-	UCCUUUGACUGAUACUCAACUUUCGAUAUC	346	3	865	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1169802-1170231	Cluster_5689	Pocillopora_meandrina_HIv1___Sc0000025	1169802	1170231	430	122	27	0.00819672131147541	-	ACUGGUACAAACAAGGGUCGCGUAGCCUUU	56	1	117	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1275199-1275628	Cluster_5690	Pocillopora_meandrina_HIv1___Sc0000025	1275199	1275628	430	337	58	0.04451038575667656	-	UCCUUUGACUGAUACUCAACUUUCGAUAUC	200	0	331	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1324924-1325353	Cluster_5691	Pocillopora_meandrina_HIv1___Sc0000025	1324924	1325353	430	264	74	0.03409090909090909	-	UAAGGAUCUCAAGGCGAAUAAAGCAAAG	51	10	249	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1480405-1481711	Cluster_5692	Pocillopora_meandrina_HIv1___Sc0000025	1480405	1481711	1307	1612	588	0.021712158808933003	-	UAUCUGUUACGUCAUCAAAUUAUAAUGCAC	153	7	1553	6	5	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1483448-1483951	Cluster_5693	Pocillopora_meandrina_HIv1___Sc0000025	1483448	1483951	504	267	128	0.02247191011235955	-	UAUGAUACAUCUUCUUUACGUCUCCGAU	19	1	263	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1486012-1486435	Cluster_5694	Pocillopora_meandrina_HIv1___Sc0000025	1486012	1486435	424	208	117	0.009615384615384616	-	UAAUAAGCUUGGAAAGUAGUCUCGAGUCCA	10	1	205	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1486636-1487065	Cluster_5695	Pocillopora_meandrina_HIv1___Sc0000025	1486636	1487065	430	1202	131	0.004159733777038269	-	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	571	20	1037	0	0	6	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1777996-1778415	Cluster_5696	Pocillopora_meandrina_HIv1___Sc0000025	1777996	1778415	420	148	78	0.6756756756756757	.	UCUUAAAAAUGCUGCCCUCGGC	32	42	6	26	62	11	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2071414-2071843	Cluster_5697	Pocillopora_meandrina_HIv1___Sc0000025	2071414	2071843	430	264	102	0.9924242424242424	+	UGCCUCAAUUAUUUGUUUCCACUGUUGAUC	102	3	255	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2075374-2075803	Cluster_5698	Pocillopora_meandrina_HIv1___Sc0000025	2075374	2075803	430	273	70	1.0	+	UACGAGUACGUGGCUCAGAAUUUCCCUUGG	50	2	267	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2224814-2225241	Cluster_5699	Pocillopora_meandrina_HIv1___Sc0000025	2224814	2225241	428	102	43	0.029411764705882353	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUUG	19	0	94	4	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2231869-2232298	Cluster_5700	Pocillopora_meandrina_HIv1___Sc0000025	2231869	2232298	430	98	25	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	27	0	95	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2234954-2235380	Cluster_5701	Pocillopora_meandrina_HIv1___Sc0000025	2234954	2235380	427	222	128	0.8918918918918919	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	12	5	213	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2235397-2235827	Cluster_5702	Pocillopora_meandrina_HIv1___Sc0000025	2235397	2235827	431	320	152	0.95	+	UGAUAACUGUACUCUUGAAAUUCAUCGAU	20	1	308	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2369398-2369823	Cluster_5703	Pocillopora_meandrina_HIv1___Sc0000025	2369398	2369823	426	299	56	1.0	+	CGCGGAAAGAGGAGAAAUUGCACU	53	17	147	4	8	2	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2646833-2647260	Cluster_5704	Pocillopora_meandrina_HIv1___Sc0000025	2646833	2647260	428	174	64	0.9712643678160919	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	50	19	140	6	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2974458-2974886	Cluster_5705	Pocillopora_meandrina_HIv1___Sc0000025	2974458	2974886	429	252	13	0.05555555555555555	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	208	0	251	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3200807-3201225	Cluster_5706	Pocillopora_meandrina_HIv1___Sc0000025	3200807	3201225	419	122	68	0.28688524590163933	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	12	1	108	0	3	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3258105-3258783	Cluster_5707	Pocillopora_meandrina_HIv1___Sc0000025	3258105	3258783	679	640	216	0.0375	-	UCAUCUCCGAGGCUGUUGUAUCAUCAAC	63	7	614	0	3	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3395192-3395616	Cluster_5708	Pocillopora_meandrina_HIv1___Sc0000025	3395192	3395616	425	107	23	0.8317757009345794	+	UGGAUUUUCCUCUACAUCGUUUGCU	81	1	104	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3421163-3421658	Cluster_5709	Pocillopora_meandrina_HIv1___Sc0000025	3421163	3421658	496	700	94	0.7814285714285715	.	UGAGAUAUGAAUUAAAAACUGAAUGUGGA	105	1	674	1	10	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3587727-3588154	Cluster_5710	Pocillopora_meandrina_HIv1___Sc0000025	3587727	3588154	428	355	85	0.9859154929577465	+	UUGUGAUGGAGGCGAUGAGCAGUG	74	11	196	3	7	19	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3681831-3682492	Cluster_5711	Pocillopora_meandrina_HIv1___Sc0000025	3681831	3682492	662	224	97	0.9910714285714286	+	UAUCAAGUAGAGAUGUCUGAGCCCGAUG	24	1	220	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3683349-3683929	Cluster_5712	Pocillopora_meandrina_HIv1___Sc0000025	3683349	3683929	581	1401	368	0.9643112062812277	+	UUUUCGGCUACUUCUGUCCAUUUUUUGGC	132	7	1369	0	2	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3694598-3695092	Cluster_5713	Pocillopora_meandrina_HIv1___Sc0000025	3694598	3695092	495	252	124	0.9007936507936508	+	UUAAGGAGCAGAUUUCAAGCUGAGGACGG	16	11	235	3	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3699216-3700043	Cluster_5714	Pocillopora_meandrina_HIv1___Sc0000025	3699216	3700043	828	551	394	0.009074410163339383	-	CACAUGACGAUCUGUACGUGAGCU	12	92	252	56	37	41	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4002468-4002889	Cluster_5715	Pocillopora_meandrina_HIv1___Sc0000025	4002468	4002889	422	114	27	0.0	-	AAGACUACAAAUUGCACAUGCC	48	11	4	9	74	13	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4039565-4039984	Cluster_5716	Pocillopora_meandrina_HIv1___Sc0000025	4039565	4039984	420	96	1	1.0	+	GGUGGGCUGUUGGAUCUUGA	96	96	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4070277-4070819	Cluster_5717	Pocillopora_meandrina_HIv1___Sc0000025	4070277	4070819	543	477	219	0.9371069182389937	+	UGAAUUCUUCGUAAACGGUUUCCUGGUC	66	7	452	1	0	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4070976-4071376	Cluster_5718	Pocillopora_meandrina_HIv1___Sc0000025	4070976	4071376	401	81	39	0.13580246913580246	-	GUUGACGUGAACGGUGUUAAAUGCCGAGC	17	1	70	0	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4072233-4072677	Cluster_5719	Pocillopora_meandrina_HIv1___Sc0000025	4072233	4072677	445	367	180	0.24795640326975477	.	UACGUUGCUUGACCUCAUCAUUUUUGG	18	6	343	3	1	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4077668-4078087	Cluster_5720	Pocillopora_meandrina_HIv1___Sc0000025	4077668	4078087	420	131	69	0.7404580152671756	.	UCGGUUCUUCAAUGCUACUGCUCCAACU	11	5	117	4	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4114969-4115398	Cluster_5721	Pocillopora_meandrina_HIv1___Sc0000025	4114969	4115398	430	501	111	0.20958083832335328	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	194	0	492	3	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4342566-4342989	Cluster_5722	Pocillopora_meandrina_HIv1___Sc0000025	4342566	4342989	424	91	30	0.967032967032967	+	CGAUGGAUAAAAAGGAGAUCACGG	30	1	31	0	2	5	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4472859-4473281	Cluster_5723	Pocillopora_meandrina_HIv1___Sc0000025	4472859	4473281	423	300	28	0.013333333333333334	-	UUCGCGUCUGAAGCUGUUAGAGU	117	9	7	1	64	214	5	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4554604-4555029	Cluster_5724	Pocillopora_meandrina_HIv1___Sc0000025	4554604	4555029	426	82	16	0.012195121951219513	-	UUCAAUGUGAAAAGUUUAUUUAGGAUGA	48	0	81	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4762568-4763127	Cluster_5725	Pocillopora_meandrina_HIv1___Sc0000025	4762568	4763127	560	423	236	0.524822695035461	.	AAUACAAGCAAAGGAGUUAGAAAAUCACGA	21	6	371	4	5	6	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4763905-4764306	Cluster_5726	Pocillopora_meandrina_HIv1___Sc0000025	4763905	4764306	402	146	93	0.4315068493150685	.	AAUUAACGCAGCAUCCGAGAUCUUUCAGA	8	4	132	2	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4764352-4765953	Cluster_5727	Pocillopora_meandrina_HIv1___Sc0000025	4764352	4765953	1602	1804	660	0.17960088691796008	-	UGAGUCUUGGAUUGAAGUACGACAUCACGUG	84	13	1659	6	12	30	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4766196-4766830	Cluster_5728	Pocillopora_meandrina_HIv1___Sc0000025	4766196	4766830	635	821	197	0.03288672350791717	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	86	7	801	2	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5014489-5014908	Cluster_5729	Pocillopora_meandrina_HIv1___Sc0000025	5014489	5014908	420	1372	55	0.0	-	AUCCCACUCCUGACACCA	412	1368	0	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5091294-5091963	Cluster_5730	Pocillopora_meandrina_HIv1___Sc0000025	5091294	5091963	670	1103	303	0.5267452402538532	.	UUUCUUCGAAAACGUGGCAAUCCGUGAUA	124	22	921	7	17	18	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5092917-5093743	Cluster_5731	Pocillopora_meandrina_HIv1___Sc0000025	5092917	5093743	827	939	241	0.48775292864749736	.	UAUUUUCUUCUGGUGGUUGAUGUCCUC	117	12	892	3	5	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5093750-5094177	Cluster_5732	Pocillopora_meandrina_HIv1___Sc0000025	5093750	5094177	428	226	78	0.8805309734513275	+	AUUCAUGUUAGGUGGUAGAGGUGU	46	2	95	4	5	28	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5095175-5095865	Cluster_5733	Pocillopora_meandrina_HIv1___Sc0000025	5095175	5095865	691	6632	449	0.07418576598311219	-	UUCAUACGGCUUCUAGAAUUUAUCCAGU	3139	49	6234	26	23	48	252	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5098043-5098471	Cluster_5734	Pocillopora_meandrina_HIv1___Sc0000025	5098043	5098471	429	160	55	0.88125	+	AGCAAGGGCACUUUUGUAAGAGAUUUUGG	31	8	140	2	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5110648-5111424	Cluster_5735	Pocillopora_meandrina_HIv1___Sc0000025	5110648	5111424	777	279	41	0.985663082437276	+	UUGGACUGUGCAUAACCAUUUGC	121	1	119	0	6	145	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5219139-5219559	Cluster_5736	Pocillopora_meandrina_HIv1___Sc0000025	5219139	5219559	421	154	81	0.6298701298701299	.	UUCACCAUACGGACCGACCCUUU	17	57	9	27	31	24	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5246768-5247196	Cluster_5737	Pocillopora_meandrina_HIv1___Sc0000025	5246768	5247196	429	433	109	0.025404157043879907	-	UGUAGAAUCAAUCUGUUACUAAGACACC	125	2	414	9	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5293601-5294031	Cluster_5738	Pocillopora_meandrina_HIv1___Sc0000025	5293601	5294031	431	742	141	0.9231805929919138	+	UUCAUGCUCUCGUUGUUCGACUGAACG	139	0	723	5	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5305154-5306148	Cluster_5739	Pocillopora_meandrina_HIv1___Sc0000025	5305154	5306148	995	1814	488	0.07772877618522601	-	UGAUAUUGUUGUCACAGAUACUUGAAAACA	246	19	1735	8	6	21	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5402913-5403340	Cluster_5740	Pocillopora_meandrina_HIv1___Sc0000025	5402913	5403340	428	191	68	0.9476439790575916	+	UGCGUGUUCUCAUUUCGGGUUGGUGAUC	25	3	184	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5405407-5405838	Cluster_5741	Pocillopora_meandrina_HIv1___Sc0000025	5405407	5405838	432	313	113	0.9329073482428115	+	UACGUGUAGAAAGCCUUCUCUGACAUC	31	0	294	0	4	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5406058-5406570	Cluster_5742	Pocillopora_meandrina_HIv1___Sc0000025	5406058	5406570	513	201	100	0.9751243781094527	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	29	1	192	2	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5406887-5407702	Cluster_5743	Pocillopora_meandrina_HIv1___Sc0000025	5406887	5407702	816	12650	1392	0.885691699604743	+	UAAUGAAGUCGUAAUUUGUCCAUCC	3026	94	11904	23	374	118	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:166158-166685	Cluster_5744	Pocillopora_meandrina_HIv1___Sc0000026	166158	166685	528	266	117	0.06766917293233082	-	UCGGCAACAACUGGAGUAAAAAAUUCGGGA	35	3	242	5	0	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:282952-283847	Cluster_5745	Pocillopora_meandrina_HIv1___Sc0000026	282952	283847	896	1197	300	0.5730994152046783	.	UGAUAAGAAAGACAUAAGAAGUUUUGG	131	15	1082	17	17	12	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:288092-289261	Cluster_5746	Pocillopora_meandrina_HIv1___Sc0000026	288092	289261	1170	2047	549	0.180752320468979	-	AUGAGCGAUAUCGCAGAACAGCUGCUGAG	233	70	1914	3	16	13	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:525538-527014	Cluster_5747	Pocillopora_meandrina_HIv1___Sc0000026	525538	527014	1477	3545	488	0.11198871650211566	-	UGUCAAGUAACCAAGCUUUUUCAAGACUGUU	472	15	3226	24	8	52	220	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:527039-527466	Cluster_5748	Pocillopora_meandrina_HIv1___Sc0000026	527039	527466	428	414	77	0.014492753623188406	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	219	5	399	1	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:571894-572312	Cluster_5749	Pocillopora_meandrina_HIv1___Sc0000026	571894	572312	419	191	133	1.0	+	UGACUGCUCAACUAGCUAUGGAAAU	10	65	67	10	25	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:573348-574087	Cluster_5750	Pocillopora_meandrina_HIv1___Sc0000026	573348	574087	740	544	374	0.9963235294117647	+	CGCUUUGCGAUUGUAGAAACUGAACGCA	10	121	272	42	44	45	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:621538-621958	Cluster_5751	Pocillopora_meandrina_HIv1___Sc0000026	621538	621958	421	283	75	1.0	+	AAGGAGGUUUUUUGAAAAA	51	141	39	60	15	5	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:630397-630858	Cluster_5752	Pocillopora_meandrina_HIv1___Sc0000026	630397	630858	462	1403	238	1.0	+	UUGAAAUGAUGCAGAAACAUGUUAGACU	194	65	973	19	54	239	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:632280-632715	Cluster_5753	Pocillopora_meandrina_HIv1___Sc0000026	632280	632715	436	355	126	1.0	+	UACCUACAAUGAGACUGA	27	165	97	51	14	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:698283-699067	Cluster_5754	Pocillopora_meandrina_HIv1___Sc0000026	698283	699067	785	788	334	0.18781725888324874	-	UUUAGACUUGCAAACUUUGCUAAAAUGA	94	8	712	5	15	19	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:699945-700643	Cluster_5755	Pocillopora_meandrina_HIv1___Sc0000026	699945	700643	699	242	122	0.06611570247933884	-	UGUACUUUGUCUUUGUUGAAUUUGAUUC	22	1	232	0	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:791196-791826	Cluster_5756	Pocillopora_meandrina_HIv1___Sc0000026	791196	791826	631	1552	415	0.967139175257732	+	UGUCGAAGAUAAGUAGCGAAGUUCUAUU	180	14	1471	25	6	8	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:792187-792608	Cluster_5757	Pocillopora_meandrina_HIv1___Sc0000026	792187	792608	422	166	101	0.9397590361445783	+	UAUAAUCAAACGUAAAACUGUGACGUGGGC	23	10	140	5	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:949839-950319	Cluster_5758	Pocillopora_meandrina_HIv1___Sc0000026	949839	950319	481	282	150	0.9822695035460993	+	CCUUCGAUAGCUCAGUUGGU	24	121	85	36	8	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:977072-977501	Cluster_5759	Pocillopora_meandrina_HIv1___Sc0000026	977072	977501	430	258	18	0.0	-	UGAAUGCUCUGCGACUGAGUGUAGGACGAG	112	2	252	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1030722-1031142	Cluster_5760	Pocillopora_meandrina_HIv1___Sc0000026	1030722	1031142	421	115	47	0.2	.	UCGAUUCCUGAUGUUUCCCGAGA	35	27	17	5	8	54	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1128307-1128734	Cluster_5761	Pocillopora_meandrina_HIv1___Sc0000026	1128307	1128734	428	203	97	0.034482758620689655	-	UACGAUCGCUUUGACUUGACUCGCGUCACA	17	5	193	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1131534-1132186	Cluster_5762	Pocillopora_meandrina_HIv1___Sc0000026	1131534	1132186	653	702	248	0.045584045584045586	-	UAAUGACUUCAGAGUAGACAGAGACGGU	90	8	658	10	2	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1132594-1133482	Cluster_5763	Pocillopora_meandrina_HIv1___Sc0000026	1132594	1133482	889	497	239	0.2454728370221328	.	UCAGACUAGCAACAUGAUCUUCGGUGACAGU	17	7	433	10	2	31	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1133495-1133918	Cluster_5764	Pocillopora_meandrina_HIv1___Sc0000026	1133495	1133918	424	207	85	0.033816425120772944	-	UCAAAAGCUGCCGAUAAAUCUAAA	39	1	149	4	0	4	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1138805-1139368	Cluster_5765	Pocillopora_meandrina_HIv1___Sc0000026	1138805	1139368	564	394	139	0.025380710659898477	-	UCUAUUUUCUUCUCGGUGCCGAUGACGUGU	33	8	378	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1142822-1143245	Cluster_5766	Pocillopora_meandrina_HIv1___Sc0000026	1142822	1143245	424	174	74	0.017241379310344827	-	UGUAUCUUCGUCCGUGUUCCAUUUGACUC	28	1	162	2	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1143715-1144144	Cluster_5767	Pocillopora_meandrina_HIv1___Sc0000026	1143715	1144144	430	306	72	0.0	-	UGAAUUCGUAGUGCUCGUCGUAGAUCAUGA	132	0	288	16	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1154719-1154813	Cluster_5768	Pocillopora_meandrina_HIv1___Sc0000026	1154719	1154813	95	23971	150	0.0	-	UAAGAUCAAGUUCAUGGUAUUCU	14088	61	53	21	570	22819	447	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000026:1240548-1240965	Cluster_5769	Pocillopora_meandrina_HIv1___Sc0000026	1240548	1240965	418	238	49	0.22268907563025211	.	CGGCCUGAAAAAAAAAAA	109	181	26	12	6	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1299033-1299450	Cluster_5770	Pocillopora_meandrina_HIv1___Sc0000026	1299033	1299450	418	597	13	0.998324958123953	+	CGGCCUGAAAAAAAAA	299	597	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1413056-1413485	Cluster_5771	Pocillopora_meandrina_HIv1___Sc0000026	1413056	1413485	430	1540	128	0.0012987012987012987	-	UCUUUCGGUCACGUGGGCUUCAAACGCGU	588	2	1525	1	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1606998-1607802	Cluster_5772	Pocillopora_meandrina_HIv1___Sc0000026	1606998	1607802	805	915	555	0.001092896174863388	-	CUUGACGAUUGUUUUGGGUUUCACU	28	179	454	45	72	76	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1610525-1610928	Cluster_5773	Pocillopora_meandrina_HIv1___Sc0000026	1610525	1610928	404	154	106	0.0	-	GAGGAGCAGAAUCAGACA	10	52	39	26	16	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1614939-1615346	Cluster_5774	Pocillopora_meandrina_HIv1___Sc0000026	1614939	1615346	408	128	89	0.0	-	GGGGUCUGCGAUCUGAGAAA	7	37	45	8	10	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1616657-1617081	Cluster_5775	Pocillopora_meandrina_HIv1___Sc0000026	1616657	1617081	425	244	173	0.0	-	AAUGCCGAUGAAGACUGGAGACGGAGAUU	7	57	102	25	25	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1842927-1843348	Cluster_5776	Pocillopora_meandrina_HIv1___Sc0000026	1842927	1843348	422	127	63	1.0	+	CAAAGAACUGAGCACAGA	14	41	39	15	12	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1905946-1906394	Cluster_5777	Pocillopora_meandrina_HIv1___Sc0000026	1905946	1906394	449	463	213	0.19870410367170627	-	UAUGACGUUCCAGAAUCUUUGACAAAA	35	2	434	6	7	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1906916-1907345	Cluster_5778	Pocillopora_meandrina_HIv1___Sc0000026	1906916	1907345	430	145	44	0.027586206896551724	-	UGAAUAGCAUAACUGAUGAACUACGUG	21	1	141	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2020697-2021125	Cluster_5779	Pocillopora_meandrina_HIv1___Sc0000026	2020697	2021125	429	148	43	0.9932432432432432	+	GUUUCCGUAGUGUAGUGGUUAUCACGUGC	49	21	113	4	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2099923-2100394	Cluster_5780	Pocillopora_meandrina_HIv1___Sc0000026	2099923	2100394	472	4050	394	0.010123456790123457	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	1030	301	3577	32	77	35	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2270068-2270496	Cluster_5781	Pocillopora_meandrina_HIv1___Sc0000026	2270068	2270496	429	104	35	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	38	0	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2272756-2273165	Cluster_5782	Pocillopora_meandrina_HIv1___Sc0000026	2272756	2273165	410	82	46	0.21951219512195122	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	10	0	78	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2274567-2274996	Cluster_5783	Pocillopora_meandrina_HIv1___Sc0000026	2274567	2274996	430	198	42	0.9797979797979798	+	UGGAGAUGGAAUCAAGAAAUGCAAAACAGG	78	1	184	1	5	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2275173-2275598	Cluster_5784	Pocillopora_meandrina_HIv1___Sc0000026	2275173	2275598	426	201	42	0.17412935323383086	-	UAGUUUGAAAAGAUAUCGCUCAGUG	90	5	188	4	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2496420-2496840	Cluster_5785	Pocillopora_meandrina_HIv1___Sc0000026	2496420	2496840	421	150	12	0.0	-	AAAGUUCUGGUUUAAAAAAAAA	41	63	1	29	46	11	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2593185-2593614	Cluster_5786	Pocillopora_meandrina_HIv1___Sc0000026	2593185	2593614	430	300	29	0.9966666666666667	+	AACUACUGCUCGUACUCUAGAUAUGACA	78	10	286	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2699237-2699665	Cluster_5787	Pocillopora_meandrina_HIv1___Sc0000026	2699237	2699665	429	415	54	0.00963855421686747	-	UGACCGGUUUGCCCGACUGAAUAUCUCUC	222	1	409	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2700106-2700534	Cluster_5788	Pocillopora_meandrina_HIv1___Sc0000026	2700106	2700534	429	171	44	0.0	-	UUGGAUAAAUUGGGUGUUAGUGAGAAGCC	43	0	169	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2854799-2855381	Cluster_5789	Pocillopora_meandrina_HIv1___Sc0000026	2854799	2855381	583	1611	265	0.9739292364990689	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	514	5	1587	2	3	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2855709-2856305	Cluster_5790	Pocillopora_meandrina_HIv1___Sc0000026	2855709	2856305	597	5745	519	0.9980852915578764	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	918	9	5685	4	9	12	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2858479-2858906	Cluster_5791	Pocillopora_meandrina_HIv1___Sc0000026	2858479	2858906	428	98	45	1.0	+	AGUUUCUUACUUCGGACAUCAAAUUUUGU	15	2	95	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2861063-2861801	Cluster_5792	Pocillopora_meandrina_HIv1___Sc0000026	2861063	2861801	739	1695	269	0.9988200589970502	+	UAACGAGAUUAAAACGACAAUGAACAAUAUA	389	7	1678	0	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2861901-2863409	Cluster_5793	Pocillopora_meandrina_HIv1___Sc0000026	2861901	2863409	1509	7998	612	0.9998749687421855	+	UCUGGAAAAUUUUCAGCGUGUGGGCAUCUC	2694	10	7934	7	13	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2864434-2864857	Cluster_5794	Pocillopora_meandrina_HIv1___Sc0000026	2864434	2864857	424	226	112	1.0	+	UUAGAGACACGAGCUGAACUCCAUUGUAGC	19	0	224	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2864896-2865622	Cluster_5795	Pocillopora_meandrina_HIv1___Sc0000026	2864896	2865622	727	417	160	1.0	+	UUUUGUUACAAGAAUCGAUCUGUGGUUCCAC	33	1	412	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2865714-2867126	Cluster_5796	Pocillopora_meandrina_HIv1___Sc0000026	2865714	2867126	1413	5988	700	0.9998329993319973	+	UGAAAUGACUCUCGGUACAGGACCAUGUG	1559	30	5888	17	7	10	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2867361-2867821	Cluster_5797	Pocillopora_meandrina_HIv1___Sc0000026	2867361	2867821	461	1086	135	1.0	+	UUAUAAGCUUGUGAUCGUUUAUCCAACUGGC	375	9	1068	4	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2867919-2868544	Cluster_5798	Pocillopora_meandrina_HIv1___Sc0000026	2867919	2868544	626	2141	180	1.0	+	UGCAACUUGCCGUCCAUUGUAAAGAACGAU	1177	4	2120	0	10	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2874318-2875769	Cluster_5799	Pocillopora_meandrina_HIv1___Sc0000026	2874318	2875769	1452	12253	1331	0.9871868113931282	+	UCCGAUCCCUGAUCUAAUCCCUGACCCGA	1669	142	11989	20	33	47	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2877087-2877596	Cluster_5800	Pocillopora_meandrina_HIv1___Sc0000026	2877087	2877596	510	436	92	0.9931192660550459	+	UUGGUUCCCUCUUCCACUAGAUGGUAAGU	71	17	404	2	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3143476-3144415	Cluster_5801	Pocillopora_meandrina_HIv1___Sc0000026	3143476	3144415	940	904	409	0.8683628318584071	+	UUCGAUCUUUUCUGUGUAAUGUGUAGCCG	36	12	813	6	6	28	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3240248-3240674	Cluster_5802	Pocillopora_meandrina_HIv1___Sc0000026	3240248	3240674	427	139	16	0.0	-	UGAAACUCUGAUCUGAAAACAUUUGUC	54	1	138	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3383355-3383785	Cluster_5803	Pocillopora_meandrina_HIv1___Sc0000026	3383355	3383785	431	558	73	0.992831541218638	+	AAUUAAAUGUAUAAACGAAAAUAGUAGAAU	99	5	542	1	2	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3714299-3714726	Cluster_5804	Pocillopora_meandrina_HIv1___Sc0000026	3714299	3714726	428	98	24	0.0	-	AGUCAUUUCGAAACAUGGACAACUGGGU	31	0	96	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3864683-3865111	Cluster_5805	Pocillopora_meandrina_HIv1___Sc0000026	3864683	3865111	429	184	34	0.0	-	AGGAUGGACUGUGUUCCAGAAGAGACUG	47	2	176	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3907219-3907656	Cluster_5806	Pocillopora_meandrina_HIv1___Sc0000026	3907219	3907656	438	479	170	0.9812108559498957	+	CGCGGGAGACCGGGGUUCGAUUCCCCG	44	37	373	4	40	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3912046-3912474	Cluster_5807	Pocillopora_meandrina_HIv1___Sc0000026	3912046	3912474	429	305	93	0.28524590163934427	.	GACGCGUAUAAUGUAGCUCUGGUUGAGG	52	13	273	9	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4115811-4116238	Cluster_5808	Pocillopora_meandrina_HIv1___Sc0000026	4115811	4116238	428	114	44	0.956140350877193	+	AGGAUGGACAGUGUUUCAGAAGAGACUGG	13	12	83	2	7	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4178493-4178914	Cluster_5809	Pocillopora_meandrina_HIv1___Sc0000026	4178493	4178914	422	94	9	0.9042553191489362	+	UCUGACGAAGGGCUGACACUCG	83	1	5	1	85	0	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4340248-4340652	Cluster_5810	Pocillopora_meandrina_HIv1___Sc0000026	4340248	4340652	405	114	93	0.008771929824561403	-	GCUGGACGGAAUUCAGUG	4	44	44	12	6	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4542219-4542774	Cluster_5811	Pocillopora_meandrina_HIv1___Sc0000026	4542219	4542774	556	5572	391	0.2543072505384063	.	UCCGGUGUAAAAUAAAACAGAAGCAUU	1352	69	4743	373	35	104	248	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4570036-4570464	Cluster_5812	Pocillopora_meandrina_HIv1___Sc0000026	4570036	4570464	429	398	46	0.0	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	283	1	392	1	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4606865-4607294	Cluster_5813	Pocillopora_meandrina_HIv1___Sc0000026	4606865	4607294	430	307	92	0.990228013029316	+	UGUAAAGACGUUUUGAGGCUUUGGAGACA	60	2	299	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4661408-4661833	Cluster_5814	Pocillopora_meandrina_HIv1___Sc0000026	4661408	4661833	426	132	62	0.03787878787878788	-	UGCUCGAUUAAUUUGGACAAAGUGUCAUCUC	11	2	126	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4918463-4918885	Cluster_5815	Pocillopora_meandrina_HIv1___Sc0000026	4918463	4918885	423	161	24	0.9937888198757764	+	UUCGCGUCUGAAGCUGUUAGAGU	87	16	1	1	18	123	2	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5244402-5244920	Cluster_5816	Pocillopora_meandrina_HIv1___Sc0000026	5244402	5244920	519	3202	291	1.0	+	GUUGUCAGUCAACUCUCAAACAUCU	1100	116	2592	37	321	66	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5310164-5311667	Cluster_5817	Pocillopora_meandrina_HIv1___Sc0000026	5310164	5311667	1504	1790	773	0.04748603351955307	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	49	13	1672	10	32	24	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5321897-5322314	Cluster_5818	Pocillopora_meandrina_HIv1___Sc0000026	5321897	5322314	418	171	31	0.07017543859649122	-	AAUGGAUGGAGACUGCUC	43	160	5	2	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5391496-5391926	Cluster_5819	Pocillopora_meandrina_HIv1___Sc0000026	5391496	5391926	431	46917	445	0.9999786857642219	+	GCACUGGUGGUUCAGUGGUAGAAUUCUC	14001	18	46783	1	9	8	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5482131-5482553	Cluster_5820	Pocillopora_meandrina_HIv1___Sc0000026	5482131	5482553	423	155	39	1.0	+	UAACGUCAACUUCUUGUCUCUAG	47	5	19	11	2	60	58	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5486208-5486634	Cluster_5821	Pocillopora_meandrina_HIv1___Sc0000026	5486208	5486634	427	720	137	1.0	+	GCAAAAUGAUGAAGAACCAUGGGC	142	46	127	38	42	103	364	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:222628-223057	Cluster_5822	Pocillopora_meandrina_HIv1___Sc0000027	222628	223057	430	193	16	0.9948186528497409	+	UUAUAACCGAGUGUGCCUUAUAACCGAAU	85	0	193	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:433322-433863	Cluster_5823	Pocillopora_meandrina_HIv1___Sc0000027	433322	433863	542	5077	601	0.00019696671262556627	-	GGUGACCCGCUUACUUCUGCG	724	2031	1193	1357	211	180	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:489845-490263	Cluster_5824	Pocillopora_meandrina_HIv1___Sc0000027	489845	490263	419	213	151	0.9953051643192489	+	CAUGACCCUGGACGCGGUGCACCGUU	6	61	62	27	16	21	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:490699-491360	Cluster_5825	Pocillopora_meandrina_HIv1___Sc0000027	490699	491360	662	360	230	1.0	+	GAGGGAACUAUUGUCUGCAAU	27	102	90	63	35	47	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:632959-635086	Cluster_5826	Pocillopora_meandrina_HIv1___Sc0000027	632959	635086	2128	17824	1914	0.016326301615798924	-	UACGAGCGAUAGAUCUUAAGCAUGUGCUGC	2613	44	15977	270	83	143	1307	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:639475-639959	Cluster_5827	Pocillopora_meandrina_HIv1___Sc0000027	639475	639959	485	2647	308	0.058934642992066494	-	UAGGCGUUAAACUUUCAUUGAUAA	932	18	1569	4	5	18	1033	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:661506-662214	Cluster_5828	Pocillopora_meandrina_HIv1___Sc0000027	661506	662214	709	3994	733	0.9529293940911367	+	UUCAUCGGGAUCUCCUAAAAUAAGUGG	863	11	3862	8	15	38	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:662408-662994	Cluster_5829	Pocillopora_meandrina_HIv1___Sc0000027	662408	662994	587	613	249	0.5252854812398042	.	CAGGAAUGUAGUGCUGAACAACCA	32	6	452	27	11	47	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:663443-663885	Cluster_5830	Pocillopora_meandrina_HIv1___Sc0000027	663443	663885	443	260	104	0.8461538461538461	+	UACACACUUACGGCACACCUGGU	18	2	218	0	3	36	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:665651-666080	Cluster_5831	Pocillopora_meandrina_HIv1___Sc0000027	665651	666080	430	107	29	0.9906542056074766	+	UGAACAGAGGUAAAUCUUCGUACAUGAAUGA	49	3	103	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:698437-698866	Cluster_5832	Pocillopora_meandrina_HIv1___Sc0000027	698437	698866	430	158	35	0.04430379746835443	-	UGUACUGUGAACAUAGUGUUACCAACCAUU	78	0	156	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:704407-704834	Cluster_5833	Pocillopora_meandrina_HIv1___Sc0000027	704407	704834	428	192	58	0.6510416666666666	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	60	4	178	2	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:764669-765087	Cluster_5834	Pocillopora_meandrina_HIv1___Sc0000027	764669	765087	419	235	141	1.0	+	AAGAACCCCUGAGCGCGG	21	110	60	18	12	20	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:765961-766467	Cluster_5835	Pocillopora_meandrina_HIv1___Sc0000027	765961	766467	507	720	397	1.0	+	CAUAGCGUGAACUCAAGAGAGCU	54	119	302	36	46	145	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:783467-783891	Cluster_5836	Pocillopora_meandrina_HIv1___Sc0000027	783467	783891	425	92	39	0.021739130434782608	-	UGUGUAGAUAUGUCUUUUGGACAGGA	30	1	89	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:802361-802789	Cluster_5837	Pocillopora_meandrina_HIv1___Sc0000027	802361	802789	429	2221	74	1.0	+	UCUUGGACUGCCAGAGAACUUUGAGCAUU	1376	2	2210	3	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:837534-837952	Cluster_5838	Pocillopora_meandrina_HIv1___Sc0000027	837534	837952	419	90	34	0.044444444444444446	-	UUAUCUAUUACUGCACUGCGGC	11	33	4	9	31	13	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:953117-953545	Cluster_5839	Pocillopora_meandrina_HIv1___Sc0000027	953117	953545	429	155	44	0.0	-	UGAAACGUGUUGCUGAACGCUUGUUGUAG	26	1	153	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:953648-954075	Cluster_5840	Pocillopora_meandrina_HIv1___Sc0000027	953648	954075	428	84	11	0.023809523809523808	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	37	0	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1050272-1050697	Cluster_5841	Pocillopora_meandrina_HIv1___Sc0000027	1050272	1050697	426	167	65	0.0	-	AACUGGUGCACUUGUAGUGGGUGAUC	56	3	149	3	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1068731-1069156	Cluster_5842	Pocillopora_meandrina_HIv1___Sc0000027	1068731	1069156	426	110	36	0.02727272727272727	-	UGCCGAAAGAGGAGAGAUUGCCCUGUC	16	3	103	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1198587-1199103	Cluster_5843	Pocillopora_meandrina_HIv1___Sc0000027	1198587	1199103	517	235	93	0.9659574468085106	+	UAAAGACUCAUCAUGACAAUCGGUCAGA	39	12	213	2	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1397486-1398303	Cluster_5844	Pocillopora_meandrina_HIv1___Sc0000027	1397486	1398303	818	2983	1354	0.0013409319477036541	-	CUUGUCAAUGAUAAAAGUUCUACCCA	60	789	1275	266	216	259	178	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1400737-1401246	Cluster_5845	Pocillopora_meandrina_HIv1___Sc0000027	1400737	1401246	510	616	347	0.0	-	GAUCUGGAGAAACAUGUUAAUGAAU	19	196	214	51	52	56	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1401646-1402550	Cluster_5846	Pocillopora_meandrina_HIv1___Sc0000027	1401646	1402550	905	3398	1154	0.005002942907592701	-	ACAGUGAUUGAACGAGGCA	184	1223	842	414	394	300	225	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1405659-1406272	Cluster_5847	Pocillopora_meandrina_HIv1___Sc0000027	1405659	1406272	614	709	489	0.0014104372355430183	-	AUUUAGGUCUGGGAACAGUGUAUCC	12	156	318	54	65	66	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1406305-1406711	Cluster_5848	Pocillopora_meandrina_HIv1___Sc0000027	1406305	1406711	407	224	184	0.0	-	UGGAGGCAGCUGGACAAUAUGCUCU	5	48	101	15	28	20	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1406775-1407194	Cluster_5849	Pocillopora_meandrina_HIv1___Sc0000027	1406775	1407194	420	152	79	0.0	-	UUAGAAAAAGACGUGUACCA	26	74	32	26	8	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1408831-1409253	Cluster_5850	Pocillopora_meandrina_HIv1___Sc0000027	1408831	1409253	423	150	112	0.0	-	UGUGGACAAAGUGUGAAAUGCA	3	34	62	7	18	15	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1541116-1541543	Cluster_5851	Pocillopora_meandrina_HIv1___Sc0000027	1541116	1541543	428	324	64	0.0	-	CUCGUGGCUGUCAGGUUCGCUGUGCUGU	55	26	174	53	14	48	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1658367-1658794	Cluster_5852	Pocillopora_meandrina_HIv1___Sc0000027	1658367	1658794	428	358	75	0.05027932960893855	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	135	8	335	3	1	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1662174-1662991	Cluster_5853	Pocillopora_meandrina_HIv1___Sc0000027	1662174	1662991	818	684	165	0.043859649122807015	-	UACUAGAAUCUAACGAACAGCUCGAACACU	66	27	627	4	5	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1668827-1669254	Cluster_5854	Pocillopora_meandrina_HIv1___Sc0000027	1668827	1669254	428	281	42	0.028469750889679714	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	137	0	272	2	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1772386-1772800	Cluster_5855	Pocillopora_meandrina_HIv1___Sc0000027	1772386	1772800	415	79	18	0.02531645569620253	-	GACUUUGGUGGAGAUGGA	18	71	1	0	4	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1871789-1872212	Cluster_5856	Pocillopora_meandrina_HIv1___Sc0000027	1871789	1872212	424	2235	93	0.9991051454138703	+	UAGUUUUGAUUGUUGACAGCGUU	1019	69	11	27	407	1575	146	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1965566-1966262	Cluster_5857	Pocillopora_meandrina_HIv1___Sc0000027	1965566	1966262	697	661	444	0.006051437216338881	-	AGGACUGAUGCGUUUCUCGUGUU	15	127	306	59	50	62	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1970770-1971419	Cluster_5858	Pocillopora_meandrina_HIv1___Sc0000027	1970770	1971419	650	1364	646	0.005131964809384164	-	CAUCGAUGUAGAAAUAAAUGUAACACUUUU	19	331	628	117	104	97	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1974268-1974685	Cluster_5859	Pocillopora_meandrina_HIv1___Sc0000027	1974268	1974685	418	262	170	0.019083969465648856	-	AGAGCAAAAGGGACGAAGA	8	92	66	28	33	24	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1977430-1977833	Cluster_5860	Pocillopora_meandrina_HIv1___Sc0000027	1977430	1977833	404	150	108	0.02666666666666667	-	CUUCACAAGGACUGAUGUGUUCC	7	28	59	18	14	18	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1981421-1981841	Cluster_5861	Pocillopora_meandrina_HIv1___Sc0000027	1981421	1981841	421	290	212	0.0	-	CAGUUAGGACACGUUGCGCAU	8	49	128	27	38	25	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1981888-1982310	Cluster_5862	Pocillopora_meandrina_HIv1___Sc0000027	1981888	1982310	423	152	93	0.0	-	GACGACUGUGUACUGCUGU	10	46	60	11	14	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2334838-2335266	Cluster_5863	Pocillopora_meandrina_HIv1___Sc0000027	2334838	2335266	429	196	55	1.0	+	UCUGACGAGAAACGAGCUUUCCCAAAAUC	60	3	188	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2343596-2344208	Cluster_5864	Pocillopora_meandrina_HIv1___Sc0000027	2343596	2344208	613	466	151	0.9592274678111588	+	UAAUGCUGCUUAAUUCUUCCUCCAAUAGGA	78	5	442	4	6	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2345299-2345720	Cluster_5865	Pocillopora_meandrina_HIv1___Sc0000027	2345299	2345720	422	129	62	0.8527131782945736	+	UUGAAUGUUUUCUGCACUGUAGAGAAG	17	3	113	0	6	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2346264-2346696	Cluster_5866	Pocillopora_meandrina_HIv1___Sc0000027	2346264	2346696	433	233	129	0.7896995708154506	.	UGAACUACACGAGGAACUAGACGAACUUUAC	12	8	198	0	3	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2449984-2450525	Cluster_5867	Pocillopora_meandrina_HIv1___Sc0000027	2449984	2450525	542	1268	278	0.860410094637224	+	UUAUUUCUACAUAGAGCGAGCUCACAUC	540	71	1120	22	12	41	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2572781-2573207	Cluster_5868	Pocillopora_meandrina_HIv1___Sc0000027	2572781	2573207	427	133	68	0.7969924812030075	.	UCGAUUCCACCGAAAGAAAUAACCUGUGC	23	30	72	19	5	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2691298-2691725	Cluster_5869	Pocillopora_meandrina_HIv1___Sc0000027	2691298	2691725	428	103	19	0.9805825242718447	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	30	0	103	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2889739-2890161	Cluster_5870	Pocillopora_meandrina_HIv1___Sc0000027	2889739	2890161	423	317	58	0.04416403785488959	-	UUCGCGUCUGAAGCUGUUAGAGU	113	27	11	10	54	208	7	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2974520-2974943	Cluster_5871	Pocillopora_meandrina_HIv1___Sc0000027	2974520	2974943	424	177	17	0.9943502824858758	+	UUUGAACUCCUAAGAUCUGAUUGU	103	0	5	1	1	1	169	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2994567-2994993	Cluster_5872	Pocillopora_meandrina_HIv1___Sc0000027	2994567	2994993	427	153	49	0.2875816993464052	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	29	1	126	0	2	1	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2995725-2996153	Cluster_5873	Pocillopora_meandrina_HIv1___Sc0000027	2995725	2996153	429	239	113	0.08368200836820083	-	UGAAAGAACUUUCAUGAUGCGUUUUACCU	22	1	215	2	3	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2996504-2996923	Cluster_5874	Pocillopora_meandrina_HIv1___Sc0000027	2996504	2996923	420	284	188	0.07394366197183098	-	UGUACGAGUCAGACACGUGGAUACUUGC	12	2	265	0	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2997008-2997436	Cluster_5875	Pocillopora_meandrina_HIv1___Sc0000027	2997008	2997436	429	205	129	0.14634146341463414	-	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	16	4	183	1	2	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3271772-3272346	Cluster_5876	Pocillopora_meandrina_HIv1___Sc0000027	3271772	3272346	575	913	277	0.17305585980284777	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	116	6	863	2	3	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3272704-3273120	Cluster_5877	Pocillopora_meandrina_HIv1___Sc0000027	3272704	3273120	417	248	136	0.1532258064516129	-	UGAACUUAACGACACCUAGAUCUGCACAAGC	16	5	224	2	5	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3273423-3274148	Cluster_5878	Pocillopora_meandrina_HIv1___Sc0000027	3273423	3274148	726	1014	248	0.16765285996055226	-	UAACUCCGAUCCGAUGACCUAGAAAGUC	155	7	956	1	3	13	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3274793-3275472	Cluster_5879	Pocillopora_meandrina_HIv1___Sc0000027	3274793	3275472	680	274	153	0.11313868613138686	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	29	3	253	7	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3398818-3399233	Cluster_5880	Pocillopora_meandrina_HIv1___Sc0000027	3398818	3399233	416	122	57	1.0	+	UGAUCUGAUUGAGUUAACUAAACUGGAGUG	23	2	112	0	6	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3402621-3403050	Cluster_5881	Pocillopora_meandrina_HIv1___Sc0000027	3402621	3403050	430	342	99	0.9502923976608187	+	UAGUAUAACUUUGAUCUGAUGAAAAUCAUC	71	0	334	1	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3407295-3407721	Cluster_5882	Pocillopora_meandrina_HIv1___Sc0000027	3407295	3407721	427	121	47	0.8264462809917356	+	UGCUUCAUUUCCUUGACUGUAGUCUGC	26	5	107	2	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3414587-3415537	Cluster_5883	Pocillopora_meandrina_HIv1___Sc0000027	3414587	3415537	951	3032	592	0.9257915567282322	+	UGACUCCUUUCAAUCUGGCACAACCC	405	52	2761	37	36	81	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3747916-3748344	Cluster_5884	Pocillopora_meandrina_HIv1___Sc0000027	3747916	3748344	429	271	71	0.0	-	AAGGAAACCGAUCAGUUUAGACUCACAUU	109	3	259	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3928057-3928478	Cluster_5885	Pocillopora_meandrina_HIv1___Sc0000027	3928057	3928478	422	211	119	0.07582938388625593	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	32	1	199	2	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3929345-3929772	Cluster_5886	Pocillopora_meandrina_HIv1___Sc0000027	3929345	3929772	428	204	85	0.9901960784313726	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	4	195	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3931250-3932301	Cluster_5887	Pocillopora_meandrina_HIv1___Sc0000027	3931250	3932301	1052	779	366	0.7792041078305519	.	UCUUCCUGUUCUGUACUGAAACCAGUC	24	6	725	6	5	26	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3932560-3932990	Cluster_5888	Pocillopora_meandrina_HIv1___Sc0000027	3932560	3932990	431	627	215	0.9043062200956937	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	85	9	546	1	2	5	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3959280-3959698	Cluster_5889	Pocillopora_meandrina_HIv1___Sc0000027	3959280	3959698	419	151	38	0.9867549668874173	+	UUGGGUACUGGUGCACUGG	70	76	45	2	1	21	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3973506-3973954	Cluster_5890	Pocillopora_meandrina_HIv1___Sc0000027	3973506	3973954	449	2669	162	0.8388909704008992	+	UCCAUCUUCACCUAUUCUUGCACUGCU	489	5	2593	4	15	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4051379-4051821	Cluster_5891	Pocillopora_meandrina_HIv1___Sc0000027	4051379	4051821	443	487	146	0.162217659137577	-	UAGGAACCAAAUACUUUCACAGUAAAGC	88	7	426	8	1	31	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4138015-4138983	Cluster_5892	Pocillopora_meandrina_HIv1___Sc0000027	4138015	4138983	969	1428	399	0.14915966386554622	-	UCACAGGUAUAUAUUCUAUCGCUCUUCAAC	86	11	1300	7	7	46	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4142855-4143281	Cluster_5893	Pocillopora_meandrina_HIv1___Sc0000027	4142855	4143281	427	128	28	0.9921875	+	UAAAAGCUCCUGUGCAACCUGCACUGA	62	1	126	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4191636-4192761	Cluster_5894	Pocillopora_meandrina_HIv1___Sc0000027	4191636	4192761	1126	2174	565	0.05795768169273229	-	UCGUAUGAAAUGAGCUUCUGAACUAGGA	229	18	2054	6	10	28	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4311000-4311455	Cluster_5895	Pocillopora_meandrina_HIv1___Sc0000027	4311000	4311455	456	190	64	0.0	-	AAGGAAACGGAUCGGUUUAGACUCACAUU	33	6	149	8	2	19	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4356950-4357770	Cluster_5896	Pocillopora_meandrina_HIv1___Sc0000027	4356950	4357770	821	1043	139	0.19175455417066156	-	UAAUCGUUGGCUUUUUCUCGAGGCGUG	285	24	992	7	5	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4585570-4587589	Cluster_5897	Pocillopora_meandrina_HIv1___Sc0000027	4585570	4587589	2020	6602	1669	0.21538927597697669	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	506	186	5929	25	44	176	242	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4588481-4588908	Cluster_5898	Pocillopora_meandrina_HIv1___Sc0000027	4588481	4588908	428	196	109	0.25	.	UCCGCUACGUUUUGCUCUCCUGGGACGUGU	15	3	179	2	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4589617-4590378	Cluster_5899	Pocillopora_meandrina_HIv1___Sc0000027	4589617	4590378	762	978	339	0.065439672801636	-	UGUGUGUCUGAAUGGUCCUUGUGGAACA	60	3	960	1	0	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4692660-4693174	Cluster_5900	Pocillopora_meandrina_HIv1___Sc0000027	4692660	4693174	515	318	233	1.0	+	AUCGUGCUGUCAUGUGGAC	8	81	132	28	20	29	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4746753-4747703	Cluster_5901	Pocillopora_meandrina_HIv1___Sc0000027	4746753	4747703	951	2480	460	0.9987903225806452	+	UCGUUUGUUCCGAGGAUAAGAUGUACGGG	452	44	2407	5	3	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4801144-4801568	Cluster_5902	Pocillopora_meandrina_HIv1___Sc0000027	4801144	4801568	425	70	14	1.0	+	UGAACUACUGCUCGUACUCUAGAUACG	33	1	69	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4918249-4918669	Cluster_5903	Pocillopora_meandrina_HIv1___Sc0000027	4918249	4918669	421	151	59	0.45695364238410596	.	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	20	9	132	5	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4943975-4944393	Cluster_5904	Pocillopora_meandrina_HIv1___Sc0000027	4943975	4944393	419	909	53	1.0	+	UGCCCGGGUCCUCCACCA	512	889	20	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:5348420-5348854	Cluster_5905	Pocillopora_meandrina_HIv1___Sc0000027	5348420	5348854	435	346	62	0.002890173410404624	-	UGUGUCUAAUGUUGUCGAACGCCCCGCA	113	2	335	2	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:5491266-5492079	Cluster_5906	Pocillopora_meandrina_HIv1___Sc0000027	5491266	5492079	814	430	238	0.13488372093023257	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	18	5	400	1	2	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:96302-96724	Cluster_5907	Pocillopora_meandrina_HIv1___Sc0000028	96302	96724	423	188	58	0.16489361702127658	-	AAUCUCUUUAAGCAUGGACCUGG	51	0	53	5	2	82	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:213783-214227	Cluster_5908	Pocillopora_meandrina_HIv1___Sc0000028	213783	214227	445	332	255	1.0	+	GACAUCAAAGAGAAGCUCUGUUA	5	89	133	27	28	26	29	N	N	gga-miR-3533
Pocillopora_meandrina_HIv1___Sc0000028:215954-216389	Cluster_5909	Pocillopora_meandrina_HIv1___Sc0000028	215954	216389	436	413	271	1.0	+	GAACUGUGAGUAUACUGAAGGU	8	94	157	44	48	37	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:217988-218637	Cluster_5910	Pocillopora_meandrina_HIv1___Sc0000028	217988	218637	650	742	480	0.9986522911051213	+	AGAAGGAAAUCACUGCUCUGGCU	17	195	277	66	87	75	42	N	N	gga-miR-3533
Pocillopora_meandrina_HIv1___Sc0000028:407248-407669	Cluster_5911	Pocillopora_meandrina_HIv1___Sc0000028	407248	407669	422	105	34	0.009523809523809525	-	UUUUUCACGCAUGUUGUUAUGG	22	13	1	6	55	26	4	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:512013-512673	Cluster_5912	Pocillopora_meandrina_HIv1___Sc0000028	512013	512673	661	680	413	1.0	+	GAAGAACGUGUGUAGUAAAACCUA	23	192	242	54	64	57	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:535351-535780	Cluster_5913	Pocillopora_meandrina_HIv1___Sc0000028	535351	535780	430	104	23	0.9326923076923077	+	UUCAGUCCCUCAAGCAAGUUGUCAAGCGGU	44	2	100	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:546898-548916	Cluster_5914	Pocillopora_meandrina_HIv1___Sc0000028	546898	548916	2019	2407	903	0.6805151641046946	.	UGAGGAAUAUGAUCUACACCAUUGCUGC	64	92	1961	38	83	76	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:598975-599397	Cluster_5915	Pocillopora_meandrina_HIv1___Sc0000028	598975	599397	423	115	41	0.1565217391304348	-	UAUGAUAUCACUGUGGAGCGAGG	30	10	28	4	4	47	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:600728-601129	Cluster_5916	Pocillopora_meandrina_HIv1___Sc0000028	600728	601129	402	151	87	0.40397350993377484	.	UGGACUCGCAGUCAGACGGU	8	45	60	26	6	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:692877-693300	Cluster_5917	Pocillopora_meandrina_HIv1___Sc0000028	692877	693300	424	89	36	0.898876404494382	+	UAAGAUCGAUAAAAAAAAAAAAAAAAA	10	4	65	5	3	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:795185-795604	Cluster_5918	Pocillopora_meandrina_HIv1___Sc0000028	795185	795604	420	276	182	1.0	+	UUUGCAGAUGUGGAAAAUGACC	7	90	85	34	33	14	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:797934-798365	Cluster_5919	Pocillopora_meandrina_HIv1___Sc0000028	797934	798365	432	297	211	1.0	+	GCAGUGAACCUGAUCACGAAAUUUGUUUUCA	8	63	141	27	17	34	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:820274-820700	Cluster_5920	Pocillopora_meandrina_HIv1___Sc0000028	820274	820700	427	225	17	0.0	-	UGGAUUCUUGAAAAAAAAAAAAAAAAA	49	6	165	3	8	15	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:866909-867338	Cluster_5921	Pocillopora_meandrina_HIv1___Sc0000028	866909	867338	430	507	103	0.9743589743589743	+	UGUUUAUCUUCUGUAUGAUUUGGCUCGGU	140	4	483	11	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:867670-868097	Cluster_5922	Pocillopora_meandrina_HIv1___Sc0000028	867670	868097	428	129	48	0.9147286821705426	+	UGAACGCAGAACAGUAGGCCCGUUGGUGA	25	7	112	1	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:893322-893750	Cluster_5923	Pocillopora_meandrina_HIv1___Sc0000028	893322	893750	429	244	135	0.00819672131147541	-	CAACAAUGGACAUAGAAGAGUACAAUGCAU	13	11	218	2	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:925585-926032	Cluster_5924	Pocillopora_meandrina_HIv1___Sc0000028	925585	926032	448	234	83	0.32051282051282054	.	GAAGAGCUGAAAAAACAGAAACAGAAGACA	32	7	221	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:928630-929114	Cluster_5925	Pocillopora_meandrina_HIv1___Sc0000028	928630	929114	485	431	90	0.26450116009280744	.	GCUGAAAACAACAAUGGACAUAGAAGAGC	95	10	385	3	4	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:929523-930086	Cluster_5926	Pocillopora_meandrina_HIv1___Sc0000028	929523	930086	564	685	268	0.0072992700729927005	-	AACAGUGAAGUGUGAAUCUCUAAUGAUCUU	68	35	570	34	19	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:935841-936270	Cluster_5927	Pocillopora_meandrina_HIv1___Sc0000028	935841	936270	430	283	81	0.0035335689045936395	-	UCUCAAAGCCAUAUCUGCUGGUCUUCCAGU	61	8	261	4	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:975759-976189	Cluster_5928	Pocillopora_meandrina_HIv1___Sc0000028	975759	976189	431	131	34	0.007633587786259542	-	UGUGACUGAAAAGAUCCUGAAGGAACUGAAC	70	1	123	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:980374-980928	Cluster_5929	Pocillopora_meandrina_HIv1___Sc0000028	980374	980928	555	568	265	0.1073943661971831	-	UAAUGAAGUCGUAAUUUGUCCAUCC	62	4	536	2	10	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:981506-982018	Cluster_5930	Pocillopora_meandrina_HIv1___Sc0000028	981506	982018	513	195	105	0.035897435897435895	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	22	2	184	2	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:982237-982973	Cluster_5931	Pocillopora_meandrina_HIv1___Sc0000028	982237	982973	737	420	153	0.05476190476190476	-	UACGUGUAGAAAGCCUUCUCUGACAUC	29	1	394	5	2	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1030156-1030585	Cluster_5932	Pocillopora_meandrina_HIv1___Sc0000028	1030156	1030585	430	406	133	0.7463054187192119	.	UUUUGUGUUAUCUUGUCUUGGAGA	59	14	265	18	6	35	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1031663-1032256	Cluster_5933	Pocillopora_meandrina_HIv1___Sc0000028	1031663	1032256	594	1644	370	0.9233576642335767	+	UAUGAAAGAUCUUGAUGUGGUGCGUCA	145	18	1572	6	12	11	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1032408-1032895	Cluster_5934	Pocillopora_meandrina_HIv1___Sc0000028	1032408	1032895	488	3233	260	0.9662851840395917	+	UAAGAUCUCUUCGGUCAGAUCGUCACGG	1151	11	3201	1	3	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1044986-1045476	Cluster_5935	Pocillopora_meandrina_HIv1___Sc0000028	1044986	1045476	491	1311	348	0.2227307398932113	.	GAAGAGCUGAAAAAAUGGAAACAGAAGAC	92	24	1220	12	15	18	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1045550-1046077	Cluster_5936	Pocillopora_meandrina_HIv1___Sc0000028	1045550	1046077	528	1425	395	0.12421052631578948	-	GCUGAAAACAACGAUGGACACAGAAGAGU	263	16	1345	8	12	13	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1049910-1050671	Cluster_5937	Pocillopora_meandrina_HIv1___Sc0000028	1049910	1050671	762	1899	681	0.01685097419694576	-	CAACUAACCAUCCGUCGAUAUUGCAGUGA	79	69	1610	26	26	39	129	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1083748-1084176	Cluster_5938	Pocillopora_meandrina_HIv1___Sc0000028	1083748	1084176	429	185	23	0.032432432432432434	-	UUGACUGACAGAAGAUCUGGAAACUGAAG	61	3	179	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1084464-1084890	Cluster_5939	Pocillopora_meandrina_HIv1___Sc0000028	1084464	1084890	427	256	112	0.21484375	.	ACAAAUCCCAAAAGACUGAGCCCUCAACUC	41	4	239	0	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1084950-1085841	Cluster_5940	Pocillopora_meandrina_HIv1___Sc0000028	1084950	1085841	892	580	283	0.22586206896551725	.	UAACGUAACAUUGAAUCAGAACAU	40	7	480	3	5	9	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1092280-1093012	Cluster_5941	Pocillopora_meandrina_HIv1___Sc0000028	1092280	1093012	733	500	237	0.012	-	AAUGAAUCAAAGUUGGCUGUAGAC	32	7	411	2	3	32	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1114710-1115140	Cluster_5942	Pocillopora_meandrina_HIv1___Sc0000028	1114710	1115140	431	423	107	0.5011820330969267	.	UCUGUCUCAACAAUCUUUGUCUUCUGUU	56	0	413	2	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1115370-1115798	Cluster_5943	Pocillopora_meandrina_HIv1___Sc0000028	1115370	1115798	429	228	104	0.07894736842105263	-	GAAAAGAUCUUGAAGGAACUGAACCUGGCA	16	5	213	1	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1116462-1117551	Cluster_5944	Pocillopora_meandrina_HIv1___Sc0000028	1116462	1117551	1090	2656	861	0.08283132530120482	-	AUGGAUCCAAUUUGUUCACGUCUACUGCG	95	54	2303	42	58	52	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1141498-1141925	Cluster_5945	Pocillopora_meandrina_HIv1___Sc0000028	1141498	1141925	428	960	57	0.99375	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	486	6	951	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1151156-1151877	Cluster_5946	Pocillopora_meandrina_HIv1___Sc0000028	1151156	1151877	722	2721	576	0.16942300624770304	-	UUAAACCGACUCACAGUCCGAUUCGAAU	267	52	2266	13	43	223	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1158472-1158903	Cluster_5947	Pocillopora_meandrina_HIv1___Sc0000028	1158472	1158903	432	377	105	0.0	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	74	0	375	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1165516-1165933	Cluster_5948	Pocillopora_meandrina_HIv1___Sc0000028	1165516	1165933	418	105	53	0.5428571428571428	.	AUGUCGGCCAUCUUUGUUAA	13	61	13	21	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1181692-1182120	Cluster_5949	Pocillopora_meandrina_HIv1___Sc0000028	1181692	1182120	429	75	14	0.06666666666666667	-	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	51	0	74	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1204201-1204631	Cluster_5950	Pocillopora_meandrina_HIv1___Sc0000028	1204201	1204631	431	109	30	0.0	-	UGGAUUAUCGACGUUUAACAGAGAACUUGCC	44	3	100	3	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1221414-1222060	Cluster_5951	Pocillopora_meandrina_HIv1___Sc0000028	1221414	1222060	647	418	188	0.007177033492822967	-	AAUGAAUCAAAGUUGGCUGUAGAC	26	5	347	1	2	30	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1261645-1262093	Cluster_5952	Pocillopora_meandrina_HIv1___Sc0000028	1261645	1262093	449	636	165	0.14937106918238993	-	GAAGAGCUGAAAAAAUGGAAACAGAAGACA	92	2	626	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1264644-1265502	Cluster_5953	Pocillopora_meandrina_HIv1___Sc0000028	1264644	1265502	859	1702	418	0.024676850763807285	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	76	38	1504	8	68	35	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1269510-1270949	Cluster_5954	Pocillopora_meandrina_HIv1___Sc0000028	1269510	1270949	1440	10955	2071	0.10524874486535829	-	AUCAGUCAGAUUUGGUUGCUCUGCCAUCCC	699	199	10005	70	90	252	339	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1373147-1373575	Cluster_5955	Pocillopora_meandrina_HIv1___Sc0000028	1373147	1373575	429	95	36	1.0	+	UCUCAAAGCCAUAUCUGCUGGUCUUCCAG	21	2	91	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1395524-1396507	Cluster_5956	Pocillopora_meandrina_HIv1___Sc0000028	1395524	1396507	984	1354	460	0.9283604135893648	+	AUGGAUCCAAUUUGUACACGUCUACUGUG	113	36	1237	12	22	27	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1397764-1398188	Cluster_5957	Pocillopora_meandrina_HIv1___Sc0000028	1397764	1398188	425	163	76	0.9938650306748467	+	GCUGAAAACAACAAUGGAUGAGGGAGAGU	16	3	146	2	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1558478-1558895	Cluster_5958	Pocillopora_meandrina_HIv1___Sc0000028	1558478	1558895	418	812	21	0.9802955665024631	+	GAAGUUCUGGUUUAAAAA	769	800	5	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1838433-1838839	Cluster_5959	Pocillopora_meandrina_HIv1___Sc0000028	1838433	1838839	407	133	91	0.0	-	GUGGCUCGUUGAAAGAAU	4	47	50	8	11	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1959386-1959901	Cluster_5960	Pocillopora_meandrina_HIv1___Sc0000028	1959386	1959901	516	420	160	0.8571428571428571	+	UGAGAUUGUGUAGGUAUGUCUUUUGGACAGG	33	3	363	0	1	45	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2035084-2035513	Cluster_5961	Pocillopora_meandrina_HIv1___Sc0000028	2035084	2035513	430	879	62	1.0	+	CUUGCAAGGAUCAACCGAUGGAAAUUAUGU	380	3	864	2	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2235437-2235851	Cluster_5962	Pocillopora_meandrina_HIv1___Sc0000028	2235437	2235851	415	69	18	0.0	-	CUCGUUGUGUGUGUGUAU	22	69	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2252016-2252422	Cluster_5963	Pocillopora_meandrina_HIv1___Sc0000028	2252016	2252422	407	93	39	0.0967741935483871	-	GAAGAGCUGAAAAAAUUGGAACAGAAGA	12	5	75	1	7	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2254255-2254721	Cluster_5964	Pocillopora_meandrina_HIv1___Sc0000028	2254255	2254721	467	539	179	0.014842300556586271	-	GCUGAAAACAACAAUAGACGUAGAAGAGU	65	5	509	2	1	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2269759-2270188	Cluster_5965	Pocillopora_meandrina_HIv1___Sc0000028	2269759	2270188	430	276	51	0.967391304347826	+	UGAUCAAGUUUCCUAUCGCCUGUAAACACU	79	3	268	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2272485-2274189	Cluster_5966	Pocillopora_meandrina_HIv1___Sc0000028	2272485	2274189	1705	1789	741	0.21576299608719957	.	UCCGUGACACAACGACUUUGCCUUGCUU	99	19	1588	17	13	30	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2274765-2275194	Cluster_5967	Pocillopora_meandrina_HIv1___Sc0000028	2274765	2275194	430	159	50	0.025157232704402517	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	30	0	157	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2281627-2282045	Cluster_5968	Pocillopora_meandrina_HIv1___Sc0000028	2281627	2282045	419	161	74	0.0	-	UGAAGAUCUGAACGUCUUGGCAUUGUC	29	1	148	0	7	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2285050-2285477	Cluster_5969	Pocillopora_meandrina_HIv1___Sc0000028	2285050	2285477	428	101	15	0.9801980198019802	+	AACUACUGCUCGUGCUCUAGAUAUGACA	50	0	99	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2318943-2319363	Cluster_5970	Pocillopora_meandrina_HIv1___Sc0000028	2318943	2319363	421	214	26	0.0	-	UGGCCUGAAAAAAAAAAAAAA	49	133	0	55	26	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2502458-2502858	Cluster_5971	Pocillopora_meandrina_HIv1___Sc0000028	2502458	2502858	401	366	233	0.7950819672131147	.	UUAGCCCAUUUCUCCCAGAAGAAUUCUC	11	2	300	1	2	23	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2503021-2503698	Cluster_5972	Pocillopora_meandrina_HIv1___Sc0000028	2503021	2503698	678	8336	545	0.9968809980806143	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2298	16	8179	6	49	38	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2506422-2506837	Cluster_5973	Pocillopora_meandrina_HIv1___Sc0000028	2506422	2506837	416	120	43	0.6416666666666667	.	UGAUUGAUUAGGACUAUUUUAUAUGAAU	22	4	106	2	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2516269-2516951	Cluster_5974	Pocillopora_meandrina_HIv1___Sc0000028	2516269	2516951	683	1555	337	0.7543408360128617	.	UGAAAACUUUGAACAGACUUUACCUGAAAA	140	5	1503	12	10	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2655966-2656393	Cluster_5975	Pocillopora_meandrina_HIv1___Sc0000028	2655966	2656393	428	237	44	0.008438818565400843	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	102	0	230	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3016606-3017082	Cluster_5976	Pocillopora_meandrina_HIv1___Sc0000028	3016606	3017082	477	3430658	1504	1.7489356269263798e-06	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	1114398	4487	3421617	146	318	364	3726	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3737511-3738213	Cluster_5977	Pocillopora_meandrina_HIv1___Sc0000028	3737511	3738213	703	2228	522	0.3770197486535009	.	ACACAGUGCAACUCUCGAAUCUUAAAAAU	209	18	2038	14	17	58	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4044555-4044965	Cluster_5978	Pocillopora_meandrina_HIv1___Sc0000028	4044555	4044965	411	176	133	0.9943181818181818	+	CAAGGAAUCUGAUGCUGCUAAGGCU	6	33	83	9	18	17	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4165140-4165567	Cluster_5979	Pocillopora_meandrina_HIv1___Sc0000028	4165140	4165567	428	137	52	0.021897810218978103	-	UAACGAACAGCUCGAACACUCGAUACCAGC	26	2	132	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4188650-4189074	Cluster_5980	Pocillopora_meandrina_HIv1___Sc0000028	4188650	4189074	425	177	119	0.768361581920904	.	UAACACUAUAAACAUUCUGAGGGCGAUU	9	1	153	5	5	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4189085-4189514	Cluster_5981	Pocillopora_meandrina_HIv1___Sc0000028	4189085	4189514	430	214	97	0.8738317757009346	+	UAAUGAACGUAUAGCCAUCCAGUUGAACU	15	1	201	3	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4395479-4395908	Cluster_5982	Pocillopora_meandrina_HIv1___Sc0000028	4395479	4395908	430	316	83	0.1518987341772152	-	AUUGAUUCUAUUUUGUACGGCCUAGU	103	13	287	3	5	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4997301-4997774	Cluster_5983	Pocillopora_meandrina_HIv1___Sc0000028	4997301	4997774	474	994	176	1.0	+	GCAGCUGAUGAAUUAAAAUU	148	581	103	176	82	31	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:241050-241477	Cluster_5984	Pocillopora_meandrina_HIv1___Sc0000029	241050	241477	428	344	136	0.936046511627907	+	UCUGUCUCCUCUGUAAUAAUGACACUGA	60	4	327	0	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:269351-269760	Cluster_5985	Pocillopora_meandrina_HIv1___Sc0000029	269351	269760	410	152	92	0.05921052631578947	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	26	1	142	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:271605-272654	Cluster_5986	Pocillopora_meandrina_HIv1___Sc0000029	271605	272654	1050	731	361	0.7770177838577291	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	25	8	679	4	4	16	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:272914-273344	Cluster_5987	Pocillopora_meandrina_HIv1___Sc0000029	272914	273344	431	642	201	0.9003115264797508	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	90	7	536	1	1	11	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:354102-354987	Cluster_5988	Pocillopora_meandrina_HIv1___Sc0000029	354102	354987	886	1736	326	0.826036866359447	+	UUCAUGCUCUCGUUGUUCAACUGAACGAAG	291	221	1412	10	4	64	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:478823-479307	Cluster_5989	Pocillopora_meandrina_HIv1___Sc0000029	478823	479307	485	1817	214	0.9988992845349477	+	UGGACAAAUUCAUAGGUCUGAUGCAAACAUG	369	32	1756	5	7	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:479352-479778	Cluster_5990	Pocillopora_meandrina_HIv1___Sc0000029	479352	479778	427	168	60	0.9404761904761905	+	UAAGACCCAUCCAUCACUAUCAACUCG	30	2	164	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:480405-480833	Cluster_5991	Pocillopora_meandrina_HIv1___Sc0000029	480405	480833	429	195	42	0.9641025641025641	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	83	1	193	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:486033-486480	Cluster_5992	Pocillopora_meandrina_HIv1___Sc0000029	486033	486480	448	809	128	0.757725587144623	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	163	2	792	1	0	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:488897-489351	Cluster_5993	Pocillopora_meandrina_HIv1___Sc0000029	488897	489351	455	1513	269	0.8327825512227363	+	UUUCCAACGUAUCGAAGAAAAUUUCACUGA	173	9	1428	1	10	28	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:594923-595346	Cluster_5994	Pocillopora_meandrina_HIv1___Sc0000029	594923	595346	424	84	36	0.047619047619047616	-	CGGCCGGAAAAAAAAAAAAAAAAAAAAAAAA	14	5	71	3	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:958371-958779	Cluster_5995	Pocillopora_meandrina_HIv1___Sc0000029	958371	958779	409	76	26	0.02631578947368421	-	UGAAAAACUGUGACCGAGGC	20	45	3	19	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1029891-1030594	Cluster_5996	Pocillopora_meandrina_HIv1___Sc0000029	1029891	1030594	704	294	139	0.9319727891156463	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	37	1	278	0	4	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1031824-1032253	Cluster_5997	Pocillopora_meandrina_HIv1___Sc0000029	1031824	1032253	430	326	185	0.7668711656441718	.	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	5	286	4	1	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1036429-1036847	Cluster_5998	Pocillopora_meandrina_HIv1___Sc0000029	1036429	1036847	419	137	79	0.9051094890510949	+	UUUGAUCGGUUUUGGCGUGU	19	86	2	38	10	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1128233-1128662	Cluster_5999	Pocillopora_meandrina_HIv1___Sc0000029	1128233	1128662	430	131	58	0.9694656488549618	+	UGUUUACUUUCUUUACAACUUCGGAUACGUG	31	0	129	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1356522-1356951	Cluster_6000	Pocillopora_meandrina_HIv1___Sc0000029	1356522	1356951	430	12068	33	8.286377195889956e-05	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAA	5610	453	11515	51	28	19	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1617395-1617993	Cluster_6001	Pocillopora_meandrina_HIv1___Sc0000029	1617395	1617993	599	1430	286	0.2062937062937063	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	484	9	1352	4	12	14	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1618346-1618897	Cluster_6002	Pocillopora_meandrina_HIv1___Sc0000029	1618346	1618897	552	219	73	0.0958904109589041	-	UAUACUCCAAAGGUUCUGAAAACGAAUG	33	4	193	0	4	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1638241-1638651	Cluster_6003	Pocillopora_meandrina_HIv1___Sc0000029	1638241	1638651	411	163	64	0.7116564417177914	.	UCAACACAUCCAAACACAGAGCAUUCAAAC	15	35	91	3	0	6	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1726811-1727238	Cluster_6004	Pocillopora_meandrina_HIv1___Sc0000029	1726811	1727238	428	225	85	0.9377777777777778	+	UUAAAUGGCUUGUAAUGACUAAUAAACA	45	1	224	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1727380-1728146	Cluster_6005	Pocillopora_meandrina_HIv1___Sc0000029	1727380	1728146	767	1743	495	0.8806655192197361	+	UGGAUCAAUCUGUUUUUUAUGACAAUA	101	8	1649	4	17	27	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1729528-1730826	Cluster_6006	Pocillopora_meandrina_HIv1___Sc0000029	1729528	1730826	1299	9657	1795	0.5652894273583928	.	ACAUGACAAAACUACGAGCUUAGAAGA	762	52	7836	61	727	310	671	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1983857-1984287	Cluster_6007	Pocillopora_meandrina_HIv1___Sc0000029	1983857	1984287	431	116	26	0.06896551724137931	-	UAAUUCAAACUAUUUGGACACUGGCUUCAAU	66	1	108	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2110212-2110630	Cluster_6008	Pocillopora_meandrina_HIv1___Sc0000029	2110212	2110630	419	131	78	0.0	-	UCCCACAUGGUCUAGCGGUUAGGAUUCCU	15	26	82	7	8	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2127060-2127474	Cluster_6009	Pocillopora_meandrina_HIv1___Sc0000029	2127060	2127474	415	167	120	0.0	-	UAAAUGUACUGUGGGUUGAUACACUUGCCGC	5	23	100	17	6	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2144180-2144602	Cluster_6010	Pocillopora_meandrina_HIv1___Sc0000029	2144180	2144602	423	1745	33	0.9994269340974212	+	CGGCCUGAAGAAAAAAAA	343	887	1	318	296	240	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2159095-2159904	Cluster_6011	Pocillopora_meandrina_HIv1___Sc0000029	2159095	2159904	810	389	132	0.29562982005141386	.	UUCGCGUCUGAAGCUGUUAGAGU	115	41	20	35	33	225	35	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2406014-2406432	Cluster_6012	Pocillopora_meandrina_HIv1___Sc0000029	2406014	2406432	419	95	38	0.010526315789473684	-	UAUUGCUGAACAGACGCACA	33	74	4	5	9	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2569415-2569825	Cluster_6013	Pocillopora_meandrina_HIv1___Sc0000029	2569415	2569825	411	178	137	0.0	-	CCAAUCUAGAAGUGAUGAAUUCCUGCC	6	37	109	8	4	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2576425-2576847	Cluster_6014	Pocillopora_meandrina_HIv1___Sc0000029	2576425	2576847	423	245	49	0.0326530612244898	-	UGGUUUUGUUAGACGAAUGAUG	55	34	2	10	126	68	5	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2755286-2755714	Cluster_6015	Pocillopora_meandrina_HIv1___Sc0000029	2755286	2755714	429	1022	98	1.0	+	AAGUUGAACAGUACAUACUUGGAGGGCA	335	5	967	1	24	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3026372-3026786	Cluster_6016	Pocillopora_meandrina_HIv1___Sc0000029	3026372	3026786	415	203	7	0.9852216748768473	+	CUUUCCGAGGUCGCA	145	200	1	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3051035-3051564	Cluster_6017	Pocillopora_meandrina_HIv1___Sc0000029	3051035	3051564	530	213	79	0.6619718309859155	.	UCGGUUAUAAGACGCACCCUGAAUUUUU	64	2	193	1	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3159055-3159478	Cluster_6018	Pocillopora_meandrina_HIv1___Sc0000029	3159055	3159478	424	141	44	0.014184397163120567	-	UUAACUGGUAGUCAUGACGUCUCC	36	1	101	0	1	1	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3198879-3199290	Cluster_6019	Pocillopora_meandrina_HIv1___Sc0000029	3198879	3199290	412	94	74	0.6276595744680851	.	UGUCUCGAUGAACGCACAGCUGACG	4	19	22	12	21	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3218961-3219391	Cluster_6020	Pocillopora_meandrina_HIv1___Sc0000029	3218961	3219391	431	2536	103	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	1149	1	2533	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3310561-3310967	Cluster_6021	Pocillopora_meandrina_HIv1___Sc0000029	3310561	3310967	407	152	129	1.0	+	AUAAAGGAUCACGAGAUAGAGAGCU	4	28	69	15	13	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3399939-3400368	Cluster_6022	Pocillopora_meandrina_HIv1___Sc0000029	3399939	3400368	430	452	18	0.0	-	ACAUUACCGAAUGACUGUUCUAAAGAAUU	309	1	441	1	2	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3440457-3440886	Cluster_6023	Pocillopora_meandrina_HIv1___Sc0000029	3440457	3440886	430	146	42	0.9931506849315068	+	AAACGAUUGAAUAGCAUAACUGAUGAACUA	21	0	144	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3518051-3518964	Cluster_6024	Pocillopora_meandrina_HIv1___Sc0000029	3518051	3518964	914	2177	594	0.23288929719797888	.	UCAUAUGCAGUUAGAAGAACGCUCCGUU	148	24	1821	14	18	195	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4083263-4083679	Cluster_6025	Pocillopora_meandrina_HIv1___Sc0000029	4083263	4083679	417	145	104	0.0	-	UCUCGUAGAAGGACAAGA	3	40	68	10	9	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4582445-4583039	Cluster_6026	Pocillopora_meandrina_HIv1___Sc0000029	4582445	4583039	595	526	325	0.0	-	GAGAGAGGACGAAUUGCU	17	181	170	56	52	31	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4784112-4784538	Cluster_6027	Pocillopora_meandrina_HIv1___Sc0000029	4784112	4784538	427	131	68	1.0	+	GCUUCUAUUACCGUCAGAUCUUUGAAGAGU	35	18	98	3	8	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:81358-81775	Cluster_6028	Pocillopora_meandrina_HIv1___Sc0000030	81358	81775	418	87	2	1.0	+	CUUCCAAGACUCCAGACA	86	87	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:124220-124707	Cluster_6029	Pocillopora_meandrina_HIv1___Sc0000030	124220	124707	488	221	89	0.5248868778280543	.	AACGUGUCGAUUGUGAGUUUUCAC	18	7	146	1	11	18	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:125789-126216	Cluster_6030	Pocillopora_meandrina_HIv1___Sc0000030	125789	126216	428	101	29	0.0	-	UUAAAUGAGCUUUCGCGAUAACAUGAGGA	43	0	100	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:126305-126731	Cluster_6031	Pocillopora_meandrina_HIv1___Sc0000030	126305	126731	427	213	69	0.0	-	UCUUUCUGGAUACGGCAGCUUCUUGAA	66	9	197	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:130025-130451	Cluster_6032	Pocillopora_meandrina_HIv1___Sc0000030	130025	130451	427	132	58	0.022727272727272728	-	UCCGUUGUCACUUCGAAUCUCCUUGGGGC	24	2	126	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:131091-131516	Cluster_6033	Pocillopora_meandrina_HIv1___Sc0000030	131091	131516	426	191	72	0.4031413612565445	.	UCGACACGUUCCUUGUUUACAUAAAGGC	26	1	163	1	5	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:161973-162400	Cluster_6034	Pocillopora_meandrina_HIv1___Sc0000030	161973	162400	428	115	44	0.9652173913043478	+	UUAUUUGCACUAUUGUGGAAAAUUCCUGG	19	0	114	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:334765-335299	Cluster_6035	Pocillopora_meandrina_HIv1___Sc0000030	334765	335299	535	868	294	0.9988479262672811	+	GAAGACCAACUGUUAUGUUAAUGAAGC	51	132	511	27	44	56	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:336545-336953	Cluster_6036	Pocillopora_meandrina_HIv1___Sc0000030	336545	336953	409	245	181	0.9877551020408163	+	AACAAUAAAAUCGGCGUUACAAAAGAUA	8	67	109	30	11	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:369631-370103	Cluster_6037	Pocillopora_meandrina_HIv1___Sc0000030	369631	370103	473	356	96	0.5	.	CAAGAACUCAGCUACCCUCGAUAUUUCCUU	46	3	328	1	16	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:430880-431895	Cluster_6038	Pocillopora_meandrina_HIv1___Sc0000030	430880	431895	1016	1346	293	0.5193164933135216	.	UCUUCCUUUUAUCUCCUGUCCUUUUUAGA	214	20	1218	7	11	26	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:487043-487466	Cluster_6039	Pocillopora_meandrina_HIv1___Sc0000030	487043	487466	424	182	96	0.18681318681318682	-	UCAGCAAUACCUAAUUCUUCGUGUAGACGU	18	7	161	0	2	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:512018-512447	Cluster_6040	Pocillopora_meandrina_HIv1___Sc0000030	512018	512447	430	341	91	0.16422287390029325	-	AUUGAUUCUAUUUUGUACGGCCUAGU	105	10	302	1	15	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:528530-529053	Cluster_6041	Pocillopora_meandrina_HIv1___Sc0000030	528530	529053	524	1097	173	0.9890610756608933	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	364	32	946	10	2	12	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:746771-747174	Cluster_6042	Pocillopora_meandrina_HIv1___Sc0000030	746771	747174	404	70	24	0.9714285714285714	+	UUGUAUUUGCUGAUCUAUUUGACAUCCUC	18	7	60	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:794156-794584	Cluster_6043	Pocillopora_meandrina_HIv1___Sc0000030	794156	794584	429	181	86	0.994475138121547	+	UGGCAAGACAGUAGAGUUAGCAUUAUGGGA	31	30	122	11	10	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:802573-802991	Cluster_6044	Pocillopora_meandrina_HIv1___Sc0000030	802573	802991	419	152	97	1.0	+	CGGCAAGACAGUAGAGUUAGCAUUAUGGG	16	19	92	16	9	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1038303-1038717	Cluster_6045	Pocillopora_meandrina_HIv1___Sc0000030	1038303	1038717	415	138	105	0.0	-	UACUGGCUGAGUUACGACUGUGAAA	4	36	63	12	13	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1096429-1096854	Cluster_6046	Pocillopora_meandrina_HIv1___Sc0000030	1096429	1096854	426	204	139	0.0	-	GGGAAUACCGUGACUUGACA	9	51	94	13	18	17	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1302848-1303275	Cluster_6047	Pocillopora_meandrina_HIv1___Sc0000030	1302848	1303275	428	218	42	0.0779816513761468	-	UGAAACUCUGAUCUGAAAACAUUUGUC	74	19	192	6	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1409546-1410032	Cluster_6048	Pocillopora_meandrina_HIv1___Sc0000030	1409546	1410032	487	1513	328	1.0	+	ACACUCAUUGCUGUGUUUAUUCUUGACAUG	201	83	1283	20	28	33	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1504933-1505382	Cluster_6049	Pocillopora_meandrina_HIv1___Sc0000030	1504933	1505382	450	149	51	0.0	-	UUAGUUGUUAAAACGGCUGCUCU	17	18	16	14	43	45	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1620500-1621066	Cluster_6050	Pocillopora_meandrina_HIv1___Sc0000030	1620500	1621066	567	793	263	0.025220680958385876	-	UGACUCGUGUUAGUGCUCGGUGCUUCG	92	9	757	4	5	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1621328-1621755	Cluster_6051	Pocillopora_meandrina_HIv1___Sc0000030	1621328	1621755	428	148	68	0.013513513513513514	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	25	2	143	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1623897-1624427	Cluster_6052	Pocillopora_meandrina_HIv1___Sc0000030	1623897	1624427	531	569	220	0.012302284710017574	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	30	1	555	4	0	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1624548-1624978	Cluster_6053	Pocillopora_meandrina_HIv1___Sc0000030	1624548	1624978	431	659	139	0.010622154779969651	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	151	0	652	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2184565-2184991	Cluster_6054	Pocillopora_meandrina_HIv1___Sc0000030	2184565	2184991	427	237	51	0.9915611814345991	+	UAAUCGUUGGCUUUUUCUCGAGACGUG	74	3	226	2	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2250965-2251677	Cluster_6055	Pocillopora_meandrina_HIv1___Sc0000030	2250965	2251677	713	365	136	0.726027397260274	.	UUUUGCAGUUGAACUUAAGGAACAUAGC	45	5	321	12	3	3	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2351726-2352244	Cluster_6056	Pocillopora_meandrina_HIv1___Sc0000030	2351726	2352244	519	2557	194	0.0011732499022291747	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	930	7	2536	2	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2352347-2352778	Cluster_6057	Pocillopora_meandrina_HIv1___Sc0000030	2352347	2352778	432	2842	162	0.0031667839549612948	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	1052	1	2840	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2441886-2442311	Cluster_6058	Pocillopora_meandrina_HIv1___Sc0000030	2441886	2442311	426	101	34	0.9702970297029703	+	UGUGUAGAUAUGUCUUUUGGACAGGA	32	0	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2443025-2443803	Cluster_6059	Pocillopora_meandrina_HIv1___Sc0000030	2443025	2443803	779	792	289	0.9381313131313131	+	UGACGAUUGGUGUGAGUAGCUCAGCAC	43	6	712	5	4	12	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2455657-2457394	Cluster_6060	Pocillopora_meandrina_HIv1___Sc0000030	2455657	2457394	1738	2925	1131	0.9511111111111111	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	109	13	2771	7	31	48	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2530378-2530801	Cluster_6061	Pocillopora_meandrina_HIv1___Sc0000030	2530378	2530801	424	159	76	0.6226415094339622	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	18	4	146	0	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2535115-2535893	Cluster_6062	Pocillopora_meandrina_HIv1___Sc0000030	2535115	2535893	779	2171	528	0.23307231690465224	.	UUUUCCAUUUCGUCUUUCAGAAAGCUGAU	168	30	1993	7	16	45	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2541437-2541859	Cluster_6063	Pocillopora_meandrina_HIv1___Sc0000030	2541437	2541859	423	543	57	0.9742173112338858	+	UUCGCGUCUGAAGCUGUUAGAGU	252	54	11	8	91	365	14	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2552047-2553299	Cluster_6064	Pocillopora_meandrina_HIv1___Sc0000030	2552047	2553299	1253	13792	1063	0.03125	-	UUUGUAGGCUCUAACAGUACAUUGUU	4399	168	13287	33	46	57	201	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2561843-2563369	Cluster_6065	Pocillopora_meandrina_HIv1___Sc0000030	2561843	2563369	1527	18649	1836	0.041932543299908843	-	UUUGUAGGCUCUAACAGUACAUUGUU	4468	268	17685	45	59	106	486	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2574974-2575596	Cluster_6066	Pocillopora_meandrina_HIv1___Sc0000030	2574974	2575596	623	603	214	0.9966832504145937	+	UGUAUUGUAGCCGUAAGAUUCCUUUUGGAUC	122	3	584	2	2	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2575919-2576424	Cluster_6067	Pocillopora_meandrina_HIv1___Sc0000030	2575919	2576424	506	1714	210	0.9994165694282381	+	UGAAACUCUUUGUAUAAUGUACGUAUCCGG	721	5	1699	3	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2583026-2583561	Cluster_6068	Pocillopora_meandrina_HIv1___Sc0000030	2583026	2583561	536	301	149	0.2292358803986711	.	UACCAGAUCUAGCAAUUAUAGAAGUAUGCC	21	7	262	1	1	8	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2588002-2588429	Cluster_6069	Pocillopora_meandrina_HIv1___Sc0000030	2588002	2588429	428	137	39	0.9708029197080292	+	AUGUUUACCAGAGUCGAAAUGAAUCGCC	22	1	127	1	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2592360-2592999	Cluster_6070	Pocillopora_meandrina_HIv1___Sc0000030	2592360	2592999	640	436	149	0.9334862385321101	+	UGAUGAUAUUUCAGUGAUCACUUUUCUGUU	151	6	412	3	0	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2599239-2599668	Cluster_6071	Pocillopora_meandrina_HIv1___Sc0000030	2599239	2599668	430	124	36	0.9838709677419355	+	AACCACUGCAGAGCCAUAGAAACUUUUUGU	59	3	116	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2616779-2617212	Cluster_6072	Pocillopora_meandrina_HIv1___Sc0000030	2616779	2617212	434	243	117	0.9094650205761317	+	UUGGAUCUUGUUCAUCAGAGUGGUGUU	16	7	220	1	3	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2627661-2628089	Cluster_6073	Pocillopora_meandrina_HIv1___Sc0000030	2627661	2628089	429	232	42	0.12931034482758622	-	UAAUCGACGAAUACAAUCCAGGUAUAACC	83	4	195	1	0	18	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2666798-2667352	Cluster_6074	Pocillopora_meandrina_HIv1___Sc0000030	2666798	2667352	555	308	179	1.0	+	CCUUAUGCCAAGACUGUGUUAAAACA	34	45	221	13	9	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3024772-3025324	Cluster_6075	Pocillopora_meandrina_HIv1___Sc0000030	3024772	3025324	553	235	69	0.9276595744680851	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	45	0	215	0	3	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3025677-3026275	Cluster_6076	Pocillopora_meandrina_HIv1___Sc0000030	3025677	3026275	599	1517	277	0.8108108108108109	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	485	8	1446	3	2	12	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3073309-3073771	Cluster_6077	Pocillopora_meandrina_HIv1___Sc0000030	3073309	3073771	463	816	285	0.0012254901960784314	-	AGGGAUGGUGAAAUUCAUAGUUCUGAGGCA	181	88	604	28	31	36	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3271465-3271884	Cluster_6078	Pocillopora_meandrina_HIv1___Sc0000030	3271465	3271884	420	195	5	0.0	-	GAAGUUCUGGUUUUAAAAAA	84	193	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3297483-3297915	Cluster_6079	Pocillopora_meandrina_HIv1___Sc0000030	3297483	3297915	433	191	76	0.8010471204188482	+	UCGAUUCAAAUUUGACAGUGGCGUGGUUCUU	23	8	157	9	7	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3306544-3306971	Cluster_6080	Pocillopora_meandrina_HIv1___Sc0000030	3306544	3306971	428	135	64	0.06666666666666667	-	UUAUCGUAUUGCUGGUCGUCUCGUCAUCCCU	10	1	123	0	1	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3427575-3427996	Cluster_6081	Pocillopora_meandrina_HIv1___Sc0000030	3427575	3427996	422	118	13	0.00847457627118644	-	UCGAAUCCCACUCCUGACACCA	70	27	0	15	71	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3477520-3478057	Cluster_6082	Pocillopora_meandrina_HIv1___Sc0000030	3477520	3478057	538	684	75	0.01023391812865497	-	UGGUAAAAUUCUGUUCAAAGUAGGUGU	184	2	663	5	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3568440-3569613	Cluster_6083	Pocillopora_meandrina_HIv1___Sc0000030	3568440	3569613	1174	3047	656	0.3744666885461109	.	UGAUUCUGCAGACACUAAAAUAACUCCAUU	295	35	2770	14	19	88	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3772717-3773145	Cluster_6084	Pocillopora_meandrina_HIv1___Sc0000030	3772717	3773145	429	172	40	0.9883720930232558	+	UCUUGCUGAGUGACUAAUGUUAGUUCGUA	82	0	160	11	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4047045-4047691	Cluster_6085	Pocillopora_meandrina_HIv1___Sc0000030	4047045	4047691	647	2529	383	0.09885330170027679	-	UACACUGUGCCAAAUAGCUUGCCUUAUU	293	16	2363	4	6	93	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4091857-4093102	Cluster_6086	Pocillopora_meandrina_HIv1___Sc0000030	4091857	4093102	1246	5220	1313	0.7279693486590039	.	UGUUGUCGAUUAGCUUUGGUACACAGUU	219	58	4451	36	315	142	218	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4101884-4102307	Cluster_6087	Pocillopora_meandrina_HIv1___Sc0000030	4101884	4102307	424	236	53	0.5847457627118644	.	UGAAGUCGAGCUAGAAGAGGA	31	97	2	66	50	17	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4407822-4408597	Cluster_6088	Pocillopora_meandrina_HIv1___Sc0000030	4407822	4408597	776	1378	648	0.000725689404934688	-	UGGAAAUGAUGAAAAUUGGUUU	30	313	523	167	179	104	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4490492-4491403	Cluster_6089	Pocillopora_meandrina_HIv1___Sc0000030	4490492	4491403	912	1117	441	0.9230080572963295	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	83	5	1062	9	12	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4491504-4491931	Cluster_6090	Pocillopora_meandrina_HIv1___Sc0000030	4491504	4491931	428	179	98	0.888268156424581	+	UGAGCUCGAACGAUCCAGUACUUUGUU	16	2	167	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4492133-4492539	Cluster_6091	Pocillopora_meandrina_HIv1___Sc0000030	4492133	4492539	407	182	104	0.6593406593406593	.	UCCGCUACGUUUUGCUCUCCUGGGACGUGU	14	3	154	4	2	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4493118-4494019	Cluster_6092	Pocillopora_meandrina_HIv1___Sc0000030	4493118	4494019	902	972	328	0.8981481481481481	+	UGAGACUUGUUGUUGGGUAACUGACGUG	139	7	911	5	3	17	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4494056-4496075	Cluster_6093	Pocillopora_meandrina_HIv1___Sc0000030	4494056	4496075	2020	6267	1589	0.7791606829423967	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	432	187	5570	27	51	189	243	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4522594-4523017	Cluster_6094	Pocillopora_meandrina_HIv1___Sc0000030	4522594	4523017	424	126	65	0.09523809523809523	-	UUUGACGUUCUUGCUUCUGUCUCACCAG	20	3	120	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4528996-4529423	Cluster_6095	Pocillopora_meandrina_HIv1___Sc0000030	4528996	4529423	428	109	16	1.0	+	UUGUCUACGAGAAGCCUGUCCAUUUUGU	90	6	102	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4530096-4530525	Cluster_6096	Pocillopora_meandrina_HIv1___Sc0000030	4530096	4530525	430	2265	76	0.9792494481236204	+	UUAACUCCACGGUGCCAAUGACUUUCUU	748	7	2230	6	0	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:189661-190090	Cluster_6097	Pocillopora_meandrina_HIv1___Sc0000031	189661	190090	430	208	48	1.0	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	68	2	200	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:228829-229270	Cluster_6098	Pocillopora_meandrina_HIv1___Sc0000031	228829	229270	442	671	152	0.9985096870342772	+	GACGAGGUGGCCGAGUGG	145	512	80	16	18	35	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:308440-308869	Cluster_6099	Pocillopora_meandrina_HIv1___Sc0000031	308440	308869	430	120	55	0.1	-	AAAGUUAUGAAUAAAAGGAUCUCUGAAGUG	23	1	105	0	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:840572-840994	Cluster_6100	Pocillopora_meandrina_HIv1___Sc0000031	840572	840994	423	287	199	0.003484320557491289	-	GAGGUGCUAGAACAAGACA	11	74	111	27	44	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:852697-853125	Cluster_6101	Pocillopora_meandrina_HIv1___Sc0000031	852697	853125	429	118	43	0.9915254237288136	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	33	0	105	6	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:855388-855797	Cluster_6102	Pocillopora_meandrina_HIv1___Sc0000031	855388	855797	410	89	46	0.30337078651685395	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	11	1	88	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:857199-857628	Cluster_6103	Pocillopora_meandrina_HIv1___Sc0000031	857199	857628	430	311	33	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	134	0	311	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:950692-951110	Cluster_6104	Pocillopora_meandrina_HIv1___Sc0000031	950692	951110	419	1596	11	0.0	-	UAUUAGUGCUGUAGGUGAA	1441	1596	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:978864-979284	Cluster_6105	Pocillopora_meandrina_HIv1___Sc0000031	978864	979284	421	84	17	0.011904761904761904	-	AGACGAAGGACUAACGCUCGAAA	20	9	0	12	16	36	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1353862-1354290	Cluster_6106	Pocillopora_meandrina_HIv1___Sc0000031	1353862	1354290	429	266	58	0.9398496240601504	+	GUGUAGAUCAGCCGACUUCAAUAUGUUU	76	11	231	5	8	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1455545-1457074	Cluster_6107	Pocillopora_meandrina_HIv1___Sc0000031	1455545	1457074	1530	2126	762	0.8711194731890874	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	106	27	1936	10	12	58	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1584679-1585096	Cluster_6108	Pocillopora_meandrina_HIv1___Sc0000031	1584679	1585096	418	1286	15	0.0	-	UCCCCGCAUCUCCACCAC	1001	1286	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1782267-1782706	Cluster_6109	Pocillopora_meandrina_HIv1___Sc0000031	1782267	1782706	440	1563	157	0.9974408189379399	+	GACGAGGUGGCCGAGUGG	410	1455	46	18	17	15	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1938096-1938628	Cluster_6110	Pocillopora_meandrina_HIv1___Sc0000031	1938096	1938628	533	376	128	0.2765957446808511	.	UGCAUUCUUUCUUUUCCACUGAAAUUCC	27	5	337	0	2	4	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2002024-2002452	Cluster_6111	Pocillopora_meandrina_HIv1___Sc0000031	2002024	2002452	429	511	88	0.9706457925636007	+	UACAAACAACAGAAUGUUCGAACGGCU	85	8	481	8	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2010004-2010431	Cluster_6112	Pocillopora_meandrina_HIv1___Sc0000031	2010004	2010431	428	123	46	0.08943089430894309	-	UGGAAAGUUCUGUGGUAUGCAAGUCAGC	42	4	105	5	2	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2085244-2085671	Cluster_6113	Pocillopora_meandrina_HIv1___Sc0000031	2085244	2085671	428	189	99	0.8677248677248677	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	24	3	178	1	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2251737-2252165	Cluster_6114	Pocillopora_meandrina_HIv1___Sc0000031	2251737	2252165	429	83	18	0.060240963855421686	-	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	49	0	81	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2468719-2469138	Cluster_6115	Pocillopora_meandrina_HIv1___Sc0000031	2468719	2469138	420	84	32	0.9642857142857143	+	UUUUACGCAUGGGCUUUGAUGGU	14	2	58	2	0	19	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2469935-2470363	Cluster_6116	Pocillopora_meandrina_HIv1___Sc0000031	2469935	2470363	429	2665	89	1.0	+	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1612	3	2657	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2470534-2470959	Cluster_6117	Pocillopora_meandrina_HIv1___Sc0000031	2470534	2470959	426	92	39	1.0	+	UGACGUCCAAACGAGCCUGAUCUUGAUG	15	0	90	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2609712-2610141	Cluster_6118	Pocillopora_meandrina_HIv1___Sc0000031	2609712	2610141	430	164	29	0.0	-	AAAAUACUGAAGUGUGCUAGUAAUGAUGAC	101	3	160	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2621728-2622157	Cluster_6119	Pocillopora_meandrina_HIv1___Sc0000031	2621728	2622157	430	2788	122	1.0	+	GUGAUAAGAAACAUGCUCUGAGCUU	913	586	1725	122	60	225	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2642438-2642850	Cluster_6120	Pocillopora_meandrina_HIv1___Sc0000031	2642438	2642850	413	167	116	0.9880239520958084	+	AUUACCGUUGCUACGCGGAUGAAGAGGCU	8	47	58	16	17	21	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2645498-2645920	Cluster_6121	Pocillopora_meandrina_HIv1___Sc0000031	2645498	2645920	423	256	177	0.99609375	+	GGCUAAAAGGACGUGUCACACUCAACA	6	57	107	31	16	20	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2651920-2652333	Cluster_6122	Pocillopora_meandrina_HIv1___Sc0000031	2651920	2652333	414	228	167	0.9912280701754386	+	GUGUGGAGUCCUGUAAAACCAUUUUGGCUU	7	52	119	20	12	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2661084-2661507	Cluster_6123	Pocillopora_meandrina_HIv1___Sc0000031	2661084	2661507	424	268	186	1.0	+	GGAUGGAGUCUGAAGAAUU	7	70	102	13	34	29	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2663002-2663419	Cluster_6124	Pocillopora_meandrina_HIv1___Sc0000031	2663002	2663419	418	231	146	1.0	+	UUCAUGGUGACAACUUUGACUGGACA	8	66	88	27	22	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2665651-2666077	Cluster_6125	Pocillopora_meandrina_HIv1___Sc0000031	2665651	2666077	427	269	178	1.0	+	AGGGACUGCGUGGAAAGCU	14	91	91	21	26	9	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2666312-2666858	Cluster_6126	Pocillopora_meandrina_HIv1___Sc0000031	2666312	2666858	547	301	208	1.0	+	GACAUAGCGAUCGAUGACAUAACAU	7	55	146	37	29	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2671864-2672313	Cluster_6127	Pocillopora_meandrina_HIv1___Sc0000031	2671864	2672313	450	199	133	1.0	+	CGUGGCAAAAAGUUGGCUCUCA	7	30	85	15	25	24	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2688633-2689044	Cluster_6128	Pocillopora_meandrina_HIv1___Sc0000031	2688633	2689044	412	222	174	0.9954954954954955	+	GACGACUGUGGUGAUAACUCAGAUGAAGU	6	48	99	9	23	26	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2689283-2689700	Cluster_6129	Pocillopora_meandrina_HIv1___Sc0000031	2689283	2689700	418	192	144	1.0	+	GGGACCUAUGUUCGACCACACUCUC	5	45	100	9	13	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2691784-2692205	Cluster_6130	Pocillopora_meandrina_HIv1___Sc0000031	2691784	2692205	422	196	108	1.0	+	CAAGAGCGGCAGUGCCUGGACU	17	50	53	12	42	22	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2693225-2693644	Cluster_6131	Pocillopora_meandrina_HIv1___Sc0000031	2693225	2693644	420	231	182	1.0	+	GAUUUCUCUGAUGAUUGUGGUGAUGAGAG	4	54	88	24	23	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2693729-2694134	Cluster_6132	Pocillopora_meandrina_HIv1___Sc0000031	2693729	2694134	406	156	109	0.9935897435897436	+	GACAGGACCGUUGAAGGGA	6	52	46	17	10	15	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2694854-2695659	Cluster_6133	Pocillopora_meandrina_HIv1___Sc0000031	2694854	2695659	806	550	379	1.0	+	AACAUCGGAUAUCUGCAGGU	11	136	217	55	61	53	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2695761-2696217	Cluster_6134	Pocillopora_meandrina_HIv1___Sc0000031	2695761	2696217	457	270	199	1.0	+	UCCGGUGCGAUAGUGGACACC	5	70	97	32	23	30	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2698212-2698629	Cluster_6135	Pocillopora_meandrina_HIv1___Sc0000031	2698212	2698629	418	228	136	0.9956140350877193	+	CAAAGGAUAUGUGCAACUGGAGUAACUCCA	12	65	92	26	9	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2701372-2701781	Cluster_6136	Pocillopora_meandrina_HIv1___Sc0000031	2701372	2701781	410	198	138	0.9949494949494949	+	GUUCGGCUGCGUCAGUGAUGGCA	5	51	82	17	12	22	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2703836-2704284	Cluster_6137	Pocillopora_meandrina_HIv1___Sc0000031	2703836	2704284	449	253	145	1.0	+	CAGUCAGGGACCUUGCGACU	13	90	53	34	26	27	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2704508-2704953	Cluster_6138	Pocillopora_meandrina_HIv1___Sc0000031	2704508	2704953	446	323	241	1.0	+	AUAUGCAGAACGUGUGGAGCAAAGUU	6	77	149	19	33	21	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2705918-2706347	Cluster_6139	Pocillopora_meandrina_HIv1___Sc0000031	2705918	2706347	430	269	169	1.0	+	CAGACGAAGGCAACUGUGCAAAGACUC	6	65	96	26	36	20	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2708474-2708898	Cluster_6140	Pocillopora_meandrina_HIv1___Sc0000031	2708474	2708898	425	277	205	1.0	+	GAACAUGGUCUAUGUCUGUACU	6	54	146	26	18	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2710377-2710796	Cluster_6141	Pocillopora_meandrina_HIv1___Sc0000031	2710377	2710796	420	285	198	1.0	+	AAAAUGACUGUGGAGACAACU	11	65	100	38	17	33	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2713483-2713891	Cluster_6142	Pocillopora_meandrina_HIv1___Sc0000031	2713483	2713891	409	144	100	1.0	+	GAACAUGGGAUAUCUGAAGGU	9	44	38	21	11	24	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2714892-2715406	Cluster_6143	Pocillopora_meandrina_HIv1___Sc0000031	2714892	2715406	515	405	206	1.0	+	CAGGACUGUACUGAUGGCGAAGAUGAACUC	74	71	241	21	23	22	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2718804-2719218	Cluster_6144	Pocillopora_meandrina_HIv1___Sc0000031	2718804	2719218	415	263	197	1.0	+	GCAUCCGACUGUGGCCGGC	8	96	76	29	22	20	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2719463-2720011	Cluster_6145	Pocillopora_meandrina_HIv1___Sc0000031	2719463	2720011	549	304	195	0.993421052631579	+	AACGGUGUGGAUUGCCAGAGAGCU	9	74	126	33	20	17	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2723551-2723968	Cluster_6146	Pocillopora_meandrina_HIv1___Sc0000031	2723551	2723968	418	140	97	1.0	+	AAUUACAACGGUGCAAGAUGUCAGAACUGUA	5	27	64	15	12	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2724656-2725076	Cluster_6147	Pocillopora_meandrina_HIv1___Sc0000031	2724656	2725076	421	169	101	0.9940828402366864	+	CUUCUGACUAUGUCGGCCAACGAUGUGACA	21	36	95	11	9	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2728504-2728925	Cluster_6148	Pocillopora_meandrina_HIv1___Sc0000031	2728504	2728925	422	213	150	0.9953051643192489	+	GAAAACGAGACUAGAAGAACAUUGCUGUCU	5	44	91	26	23	15	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2755644-2756062	Cluster_6149	Pocillopora_meandrina_HIv1___Sc0000031	2755644	2756062	419	69	19	0.014492753623188406	-	UAGACAGAUACAAACUCCGAGGAGGAA	33	0	66	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3008660-3009271	Cluster_6150	Pocillopora_meandrina_HIv1___Sc0000031	3008660	3009271	612	1777	639	0.0	-	GUUGUGAUCACUGGAGUAGUUAGGACAGU	73	477	760	143	89	154	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3010333-3010901	Cluster_6151	Pocillopora_meandrina_HIv1___Sc0000031	3010333	3010901	569	1067	374	0.0	-	ACCUUCCCUUUAAAAGCACCACACU	100	129	647	42	79	84	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3146487-3146911	Cluster_6152	Pocillopora_meandrina_HIv1___Sc0000031	3146487	3146911	425	145	67	0.1103448275862069	-	UGUUGCAUACAAGAUCUCCUGGUUGUAAGA	25	0	132	0	6	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3147356-3148464	Cluster_6153	Pocillopora_meandrina_HIv1___Sc0000031	3147356	3148464	1109	909	461	0.24752475247524752	.	UUUGUAUCUUUCGGGUUUGAUUCCAGUA	42	18	848	4	8	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3160689-3161116	Cluster_6154	Pocillopora_meandrina_HIv1___Sc0000031	3160689	3161116	428	119	9	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	75	0	118	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3163105-3164498	Cluster_6155	Pocillopora_meandrina_HIv1___Sc0000031	3163105	3164498	1394	1222	331	0.9386252045826514	+	UCAAAUACAACACCAAAAGAC	310	43	776	356	10	12	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3181659-3182069	Cluster_6156	Pocillopora_meandrina_HIv1___Sc0000031	3181659	3182069	411	114	68	0.6666666666666666	.	UUGUCGGGAUAUGUAGUUGCA	13	43	4	46	17	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3190502-3190919	Cluster_6157	Pocillopora_meandrina_HIv1___Sc0000031	3190502	3190919	418	214	152	0.0	-	CCUCUGUAGAUUAGUAAAUGGGCU	8	55	71	21	12	32	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3198438-3198859	Cluster_6158	Pocillopora_meandrina_HIv1___Sc0000031	3198438	3198859	422	94	27	0.0	-	AAGGGCAAGGAUGACAAUUACAUU	27	4	10	6	17	25	32	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3318396-3318825	Cluster_6159	Pocillopora_meandrina_HIv1___Sc0000031	3318396	3318825	430	225	58	0.6888888888888889	.	UAGUGUUUGUAUUGUUGGAAUAAAUGGUCA	44	13	196	10	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3335148-3335574	Cluster_6160	Pocillopora_meandrina_HIv1___Sc0000031	3335148	3335574	427	175	72	0.9942857142857143	+	UGAUUGACGUACGGUAUUUGAGACGC	19	3	170	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3369381-3369798	Cluster_6161	Pocillopora_meandrina_HIv1___Sc0000031	3369381	3369798	418	134	42	0.007462686567164179	-	UAAUAUGUGAUGAACUUA	46	82	51	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3548527-3549562	Cluster_6162	Pocillopora_meandrina_HIv1___Sc0000031	3548527	3549562	1036	5013	785	0.19429483343307402	-	UGUAAGUGCAUCUGUUGACUUUUGAAGA	1774	24	4566	19	214	72	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3551577-3552004	Cluster_6163	Pocillopora_meandrina_HIv1___Sc0000031	3551577	3552004	428	207	75	0.07246376811594203	-	UUAAAUGGCUUGUAAUGACUAAUAAACA	42	0	202	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3651114-3651647	Cluster_6164	Pocillopora_meandrina_HIv1___Sc0000031	3651114	3651647	534	798	229	0.0012531328320802004	-	UUUGCCCUUAGAGGUGUUGCUCUUCA	87	43	380	45	83	177	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3673548-3673976	Cluster_6165	Pocillopora_meandrina_HIv1___Sc0000031	3673548	3673976	429	178	84	0.03932584269662921	-	UGACACCAUAGUGCUCUAACUUCUGUAA	15	1	163	0	6	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3863646-3864066	Cluster_6166	Pocillopora_meandrina_HIv1___Sc0000031	3863646	3864066	421	78	27	0.9871794871794872	+	CCAGGACAUAUUUUCGUUAACCGGUACACC	21	6	53	1	2	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3872537-3872952	Cluster_6167	Pocillopora_meandrina_HIv1___Sc0000031	3872537	3872952	416	161	104	0.36024844720496896	.	UCUUCUCUUUUGUGCGGACA	9	97	12	34	12	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3882014-3882836	Cluster_6168	Pocillopora_meandrina_HIv1___Sc0000031	3882014	3882836	823	620	89	0.9983870967741936	+	CCAGGAUAUAGAAUGUUGGUUUGCACUGC	141	5	533	2	4	4	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3894259-3894687	Cluster_6169	Pocillopora_meandrina_HIv1___Sc0000031	3894259	3894687	429	246	58	0.983739837398374	+	UGCAUGUGCUUUGUCUUGGAUUUCAUAGU	48	7	231	1	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3894807-3895230	Cluster_6170	Pocillopora_meandrina_HIv1___Sc0000031	3894807	3895230	424	160	72	0.7625	.	UGUUACAAAACCAUUAGAACUAUCAGUU	23	5	124	2	2	3	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3896115-3897020	Cluster_6171	Pocillopora_meandrina_HIv1___Sc0000031	3896115	3897020	906	2123	490	0.8016957136128121	+	UCCUGACAUGAUUCUUUGAGUUCUUUC	242	37	1907	22	20	43	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3902209-3902722	Cluster_6172	Pocillopora_meandrina_HIv1___Sc0000031	3902209	3902722	514	4496	347	0.9268238434163701	+	UUAUAUCUUCGGUCAAAAAGUGCACUUU	1283	7	4355	8	6	8	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3958890-3959314	Cluster_6173	Pocillopora_meandrina_HIv1___Sc0000031	3958890	3959314	425	73	22	0.958904109589041	+	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	38	4	69	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4007449-4007866	Cluster_6174	Pocillopora_meandrina_HIv1___Sc0000031	4007449	4007866	418	148	9	0.02702702702702703	-	CGGCCUGAAAAAAAAAAA	134	146	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4019453-4019988	Cluster_6175	Pocillopora_meandrina_HIv1___Sc0000031	4019453	4019988	536	2961	389	0.0	-	AUCCUCCUUUGUUCCAGUGGCUGUGUU	490	146	2401	50	66	67	231	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4163166-4163585	Cluster_6176	Pocillopora_meandrina_HIv1___Sc0000031	4163166	4163585	420	78	22	1.0	+	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	23	1	77	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4501137-4501681	Cluster_6177	Pocillopora_meandrina_HIv1___Sc0000031	4501137	4501681	545	2816	350	0.9996448863636364	+	UUUGCCUUGAUAAGUGUUGCUCUGUCA	436	76	2153	22	132	371	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:4495-5713	Cluster_6178	Pocillopora_meandrina_HIv1___Sc0000032	4495	5713	1219	8448	729	0.9250710227272727	+	UGACGGAAAAGCGAUUCUCCCCUGACAAGGC	2028	38	7998	21	28	217	146	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:35625-36052	Cluster_6179	Pocillopora_meandrina_HIv1___Sc0000032	35625	36052	428	317	87	0.9589905362776026	+	UGACUAUUCAACAGCUGUUCUUCUACCA	55	3	287	1	3	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:554647-555065	Cluster_6180	Pocillopora_meandrina_HIv1___Sc0000032	554647	555065	419	145	53	0.9586206896551724	+	UGAAAAACUGUGACCGAGG	11	84	6	24	25	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:591284-591713	Cluster_6181	Pocillopora_meandrina_HIv1___Sc0000032	591284	591713	430	283	61	0.04946996466431095	-	UGAACAAGUGAGCAAGAUGAUCUUCAUGAA	110	0	280	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:592847-593274	Cluster_6182	Pocillopora_meandrina_HIv1___Sc0000032	592847	593274	428	114	38	0.008771929824561403	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	23	0	111	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:705796-706224	Cluster_6183	Pocillopora_meandrina_HIv1___Sc0000032	705796	706224	429	179	41	0.061452513966480445	-	AUCUAAACGAACUUGUUUUUCUUAUGAACA	54	1	174	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:732298-734035	Cluster_6184	Pocillopora_meandrina_HIv1___Sc0000032	732298	734035	1738	2738	1083	0.04054054054054054	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	92	15	2604	11	27	42	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:906845-907277	Cluster_6185	Pocillopora_meandrina_HIv1___Sc0000032	906845	907277	433	3840	214	1.0	+	GGGGAUGUAGCUCAGUGGU	1075	2189	1118	113	62	89	269	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:976628-977084	Cluster_6186	Pocillopora_meandrina_HIv1___Sc0000032	976628	977084	457	232	154	0.01293103448275862	-	GCCAGUACUGUGGAAAAUGCU	6	72	76	32	20	20	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:977545-977957	Cluster_6187	Pocillopora_meandrina_HIv1___Sc0000032	977545	977957	413	221	153	0.0	-	GGCAAGCAGUUGGAAGAUGGACGUACC	12	57	97	17	23	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:978626-979054	Cluster_6188	Pocillopora_meandrina_HIv1___Sc0000032	978626	979054	429	172	108	0.0	-	CUCUGACUGGGAAGACCAU	10	60	60	13	9	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1020482-1020908	Cluster_6189	Pocillopora_meandrina_HIv1___Sc0000032	1020482	1020908	427	209	119	0.12440191387559808	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	41	6	193	0	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1022751-1023800	Cluster_6190	Pocillopora_meandrina_HIv1___Sc0000032	1022751	1023800	1050	757	359	0.7859973579920739	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	28	8	708	3	3	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1024060-1024490	Cluster_6191	Pocillopora_meandrina_HIv1___Sc0000032	1024060	1024490	431	618	210	0.9110032362459547	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	95	6	544	1	3	7	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1084086-1085479	Cluster_6192	Pocillopora_meandrina_HIv1___Sc0000032	1084086	1085479	1394	13754	5092	0.9994183510251563	+	CGAAGAUGUGGAUCUGAGCUCU	86	3168	5979	1091	1348	1078	1090	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1118221-1118745	Cluster_6193	Pocillopora_meandrina_HIv1___Sc0000032	1118221	1118745	525	417	176	0.10071942446043165	-	UUGGACCAAGAUAGGCUGCUUUAGCAAG	40	10	390	3	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1287750-1288194	Cluster_6194	Pocillopora_meandrina_HIv1___Sc0000032	1287750	1288194	445	327	160	0.9938837920489296	+	GGAGAGAAGUCCUUUGAAUCCUUUGAAAGA	22	34	242	13	8	18	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1289450-1289886	Cluster_6195	Pocillopora_meandrina_HIv1___Sc0000032	1289450	1289886	437	191	129	1.0	+	GUUUAGCUGCGAUGUAUUUUCUGUG	10	46	78	25	15	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1290726-1291992	Cluster_6196	Pocillopora_meandrina_HIv1___Sc0000032	1290726	1291992	1267	1004	579	0.99800796812749	+	GUGGAUAAACCUGACGGCCUUGCAGUU	20	249	428	60	96	101	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1292775-1293294	Cluster_6197	Pocillopora_meandrina_HIv1___Sc0000032	1292775	1293294	520	632	430	1.0	+	GGAAACUGAAGGCUCAGCACGGUG	8	135	272	54	66	53	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1293438-1293865	Cluster_6198	Pocillopora_meandrina_HIv1___Sc0000032	1293438	1293865	428	367	272	1.0	+	UAAGAACCUCUUCCCCCA	7	88	181	18	28	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1332112-1332537	Cluster_6199	Pocillopora_meandrina_HIv1___Sc0000032	1332112	1332537	426	101	27	1.0	+	UGAGAUAGAAUUCUGUAAAAGCAGAAAGCA	17	16	81	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1333095-1333525	Cluster_6200	Pocillopora_meandrina_HIv1___Sc0000032	1333095	1333525	431	338	63	0.9970414201183432	+	CAUAAUCUGACACUUUACCUCGCCUUUAGUU	70	1	331	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1334774-1335201	Cluster_6201	Pocillopora_meandrina_HIv1___Sc0000032	1334774	1335201	428	108	32	1.0	+	UGUGCCAAAGGUUUAGAACGAAAGAACG	29	0	106	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1335767-1336197	Cluster_6202	Pocillopora_meandrina_HIv1___Sc0000032	1335767	1336197	431	558	93	1.0	+	CACCAAAACUGUACACAUCAACCUUAAAA	154	4	538	1	2	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1336655-1337342	Cluster_6203	Pocillopora_meandrina_HIv1___Sc0000032	1336655	1337342	688	714	275	0.9565826330532213	+	UUCUAUGGUAUGCAAGUCAGCAUGACUCAGC	55	34	662	1	2	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1338475-1339347	Cluster_6204	Pocillopora_meandrina_HIv1___Sc0000032	1338475	1339347	873	1188	263	0.9865319865319865	+	UCGGAUAUAAGGCGGUUAUCAAGCGCUCA	127	11	1138	8	7	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1553445-1553862	Cluster_6205	Pocillopora_meandrina_HIv1___Sc0000032	1553445	1553862	418	144	14	0.006944444444444444	-	CUGAGAUUGCUGUAGGCG	94	143	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1645914-1646410	Cluster_6206	Pocillopora_meandrina_HIv1___Sc0000032	1645914	1646410	497	1494	291	0.9658634538152611	+	AAUGGGAAAACGAGAACAGCGUGA	177	28	875	27	27	253	284	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1728751-1729174	Cluster_6207	Pocillopora_meandrina_HIv1___Sc0000032	1728751	1729174	424	143	70	0.02097902097902098	-	AGAGUUUUGAAGUAAAUCGGCGAAUCGUU	14	2	123	1	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1742364-1742803	Cluster_6208	Pocillopora_meandrina_HIv1___Sc0000032	1742364	1742803	440	301	114	0.27906976744186046	.	UUAUUUCCUUCUCAACUGUCCGUCACC	28	13	225	6	20	30	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1891335-1891765	Cluster_6209	Pocillopora_meandrina_HIv1___Sc0000032	1891335	1891765	431	93	10	1.0	+	GGUAAAUCCAUUGGAGAGAUUUGAGCUCGUG	73	4	88	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1997294-1997767	Cluster_6210	Pocillopora_meandrina_HIv1___Sc0000032	1997294	1997767	474	6211	453	0.9996779906617292	+	GCGACAGUGGUGUAACGGUUAUCAUGGC	1230	1804	3730	60	150	272	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2121789-2122216	Cluster_6211	Pocillopora_meandrina_HIv1___Sc0000032	2121789	2122216	428	86	14	0.9883720930232558	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	33	0	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2230250-2230656	Cluster_6212	Pocillopora_meandrina_HIv1___Sc0000032	2230250	2230656	407	205	96	0.24878048780487805	.	UCUUCAUAAUGUCUCUAGGCCUCGCUU	18	4	161	3	23	0	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2274255-2274682	Cluster_6213	Pocillopora_meandrina_HIv1___Sc0000032	2274255	2274682	428	185	110	0.12972972972972974	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	16	2	172	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2345793-2346212	Cluster_6214	Pocillopora_meandrina_HIv1___Sc0000032	2345793	2346212	420	185	119	0.8756756756756757	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	16	1	164	1	2	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2346303-2346722	Cluster_6215	Pocillopora_meandrina_HIv1___Sc0000032	2346303	2346722	420	315	204	0.9301587301587302	+	UCAGACACGUGGAUACUUGCGAUGAAGU	17	1	290	0	2	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2347073-2347501	Cluster_6216	Pocillopora_meandrina_HIv1___Sc0000032	2347073	2347501	429	243	114	0.897119341563786	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	20	1	231	0	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2348233-2348661	Cluster_6217	Pocillopora_meandrina_HIv1___Sc0000032	2348233	2348661	429	186	56	0.7258064516129032	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	40	0	162	1	2	0	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2375641-2376066	Cluster_6218	Pocillopora_meandrina_HIv1___Sc0000032	2375641	2376066	426	236	92	0.6652542372881356	.	GUGUAUCCUAUGGUAACAGUUGACGUGA	33	0	226	2	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2376095-2376524	Cluster_6219	Pocillopora_meandrina_HIv1___Sc0000032	2376095	2376524	430	339	169	0.2448377581120944	.	UCCAACUCUGUUCCAGGUGACA	16	9	267	7	23	21	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2378160-2378587	Cluster_6220	Pocillopora_meandrina_HIv1___Sc0000032	2378160	2378587	428	195	64	0.06666666666666667	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	45	0	183	0	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2412513-2412940	Cluster_6221	Pocillopora_meandrina_HIv1___Sc0000032	2412513	2412940	428	212	82	0.9150943396226415	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	94	3	203	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2414703-2415381	Cluster_6222	Pocillopora_meandrina_HIv1___Sc0000032	2414703	2415381	679	430	236	0.813953488372093	+	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	25	3	364	4	6	11	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2416192-2416616	Cluster_6223	Pocillopora_meandrina_HIv1___Sc0000032	2416192	2416616	425	216	97	0.75	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	25	5	198	3	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2453605-2454032	Cluster_6224	Pocillopora_meandrina_HIv1___Sc0000032	2453605	2454032	428	188	97	0.0797872340425532	-	UGACGUCACGAUCUUUGCGCGCUACCAUU	21	4	173	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2461523-2463349	Cluster_6225	Pocillopora_meandrina_HIv1___Sc0000032	2461523	2463349	1827	26855	2940	0.06453174455408676	-	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2304	207	25492	99	124	371	562	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2788206-2789661	Cluster_6226	Pocillopora_meandrina_HIv1___Sc0000032	2788206	2789661	1456	1787	821	0.4476776720761052	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	87	25	1423	21	22	100	196	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2789881-2791202	Cluster_6227	Pocillopora_meandrina_HIv1___Sc0000032	2789881	2791202	1322	1927	617	0.11001556824078879	-	UCUGCGUAAAAGAUUUCUUCACUGAGU	122	23	1777	11	14	52	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2994076-2994499	Cluster_6228	Pocillopora_meandrina_HIv1___Sc0000032	2994076	2994499	424	82	31	0.0975609756097561	-	UGAUAUCAUAUUCUCUGUUUCCUCAUC	33	1	74	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3147841-3148258	Cluster_6229	Pocillopora_meandrina_HIv1___Sc0000032	3147841	3148258	418	275	10	1.0	+	UAUUAAUGCUGUAGGCUU	258	268	5	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3170645-3171054	Cluster_6230	Pocillopora_meandrina_HIv1___Sc0000032	3170645	3171054	410	164	88	0.13414634146341464	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUG	14	2	154	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3217471-3217899	Cluster_6231	Pocillopora_meandrina_HIv1___Sc0000032	3217471	3217899	429	90	26	0.03333333333333333	-	AAAGAACCCGGUCACCUGUGCUGCAAAGG	51	0	84	3	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:189713-190127	Cluster_6232	Pocillopora_meandrina_HIv1___Sc0000033	189713	190127	415	127	27	1.0	+	AACUUUUGACGGUGG	51	121	4	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:205780-206208	Cluster_6233	Pocillopora_meandrina_HIv1___Sc0000033	205780	206208	429	114	35	0.0	-	AUGCAGUUGAAGAAACUAGUUAGACAAGG	27	3	107	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:352602-353035	Cluster_6234	Pocillopora_meandrina_HIv1___Sc0000033	352602	353035	434	19933	471	0.9986956303617117	+	UACAACGGGGACUAGCUCCGAUCUCUCAAG	4397	16	19887	13	2	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:512579-513003	Cluster_6235	Pocillopora_meandrina_HIv1___Sc0000033	512579	513003	425	133	70	1.0	+	AUAGUGGCACCGACUUUGAAGUAUGGAUU	7	4	125	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:534254-534684	Cluster_6236	Pocillopora_meandrina_HIv1___Sc0000033	534254	534684	431	483	92	0.010351966873706004	-	UGGCUGGGAACCAACCUCGGAGAAAAUGAC	94	12	425	14	2	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:534887-535315	Cluster_6237	Pocillopora_meandrina_HIv1___Sc0000033	534887	535315	429	136	33	0.0	-	AGCAUUUCCCGAGGGUCUGACUUACGACA	36	0	135	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:542928-544164	Cluster_6238	Pocillopora_meandrina_HIv1___Sc0000033	542928	544164	1237	5309	1072	0.11452250894707101	-	UAUUUGAUCUGUCUACCUCUUUAAAGGA	276	317	4574	193	55	43	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:561021-561449	Cluster_6239	Pocillopora_meandrina_HIv1___Sc0000033	561021	561449	429	242	82	0.0371900826446281	-	UGCAUUGUAAUCGGGAUAGACCUAUUGA	54	8	219	4	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:586365-586786	Cluster_6240	Pocillopora_meandrina_HIv1___Sc0000033	586365	586786	422	133	30	0.9774436090225563	+	UUGGAUAUCCUAACACGUGUGA	32	32	0	26	64	10	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:588868-589295	Cluster_6241	Pocillopora_meandrina_HIv1___Sc0000033	588868	589295	428	131	36	0.0	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	34	0	131	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:601778-602205	Cluster_6242	Pocillopora_meandrina_HIv1___Sc0000033	601778	602205	428	152	41	0.013157894736842105	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	41	1	148	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:614818-615245	Cluster_6243	Pocillopora_meandrina_HIv1___Sc0000033	614818	615245	428	144	41	0.0	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	45	0	143	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:640337-640764	Cluster_6244	Pocillopora_meandrina_HIv1___Sc0000033	640337	640764	428	150	41	0.0	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	47	0	147	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:659174-659761	Cluster_6245	Pocillopora_meandrina_HIv1___Sc0000033	659174	659761	588	3729	393	0.9849825690533656	+	UGUAGAAUCAAUCUGUUACUAAGACACCAGG	642	17	3591	69	7	28	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:661526-662065	Cluster_6246	Pocillopora_meandrina_HIv1___Sc0000033	661526	662065	540	543	214	0.7826887661141805	.	UGUAUUCACUUGGGUUAACUCUUCCACA	99	0	527	2	3	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:670510-670940	Cluster_6247	Pocillopora_meandrina_HIv1___Sc0000033	670510	670940	431	398	47	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	109	0	398	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:677264-677694	Cluster_6248	Pocillopora_meandrina_HIv1___Sc0000033	677264	677694	431	351	46	0.005698005698005698	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	127	1	346	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:683227-683663	Cluster_6249	Pocillopora_meandrina_HIv1___Sc0000033	683227	683663	437	53218	683	9.395317373820888e-05	-	AGCAUUUCCCGAAGGUCUGACAUACGAC	11552	172	52630	135	128	69	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:703744-704547	Cluster_6250	Pocillopora_meandrina_HIv1___Sc0000033	703744	704547	804	247	44	0.0	-	UGCAAAAGAAGACGCUUGGCUGGGAACCA	58	0	242	1	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:719371-719799	Cluster_6251	Pocillopora_meandrina_HIv1___Sc0000033	719371	719799	429	89	20	0.0	-	UGCAAAAGAAGACGCUUGGCUGGGAACCA	61	0	88	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:719973-720403	Cluster_6252	Pocillopora_meandrina_HIv1___Sc0000033	719973	720403	431	967	97	0.0	-	AGCAUUUCCCGAAGGUCUGACAUACGAC	161	2	959	0	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:743365-743782	Cluster_6253	Pocillopora_meandrina_HIv1___Sc0000033	743365	743782	418	133	67	0.8947368421052632	+	GAGUAGAUCAGCCGACUUCAACAUGUUU	17	3	113	1	1	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:747341-747769	Cluster_6254	Pocillopora_meandrina_HIv1___Sc0000033	747341	747769	429	240	63	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	60	0	231	1	3	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:778352-778780	Cluster_6255	Pocillopora_meandrina_HIv1___Sc0000033	778352	778780	429	740	79	0.9743243243243244	+	GUGUAGAUCAGCCGACUUCAACAUGUUC	157	18	581	9	32	37	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:789485-789913	Cluster_6256	Pocillopora_meandrina_HIv1___Sc0000033	789485	789913	429	231	44	0.004329004329004329	-	AGCAUUUCCCGAGGGUCUGACAUACGACA	54	1	229	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:794096-794535	Cluster_6257	Pocillopora_meandrina_HIv1___Sc0000033	794096	794535	440	299	119	0.016722408026755852	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	49	1	292	0	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:809830-810258	Cluster_6258	Pocillopora_meandrina_HIv1___Sc0000033	809830	810258	429	242	45	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	72	1	240	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:819636-820064	Cluster_6259	Pocillopora_meandrina_HIv1___Sc0000033	819636	820064	429	214	48	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	65	0	211	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:831472-831899	Cluster_6260	Pocillopora_meandrina_HIv1___Sc0000033	831472	831899	428	144	44	0.9861111111111112	+	AGCAUUUCCCGAGGGUCUAACAUACGAC	40	1	139	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:848924-849351	Cluster_6261	Pocillopora_meandrina_HIv1___Sc0000033	848924	849351	428	166	24	0.9939759036144579	+	UGAAUCGUCGAUGAGAGUGAAUAAUACU	93	1	164	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1073974-1074484	Cluster_6262	Pocillopora_meandrina_HIv1___Sc0000033	1073974	1074484	511	800	311	0.06	-	GCCUCUCACGGACCACCA	44	464	128	76	66	43	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1123428-1123881	Cluster_6263	Pocillopora_meandrina_HIv1___Sc0000033	1123428	1123881	454	1411	92	0.0	-	UUUGCUAGUUGCUUUUGUCCCGUU	366	35	48	35	53	595	645	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1435427-1435837	Cluster_6264	Pocillopora_meandrina_HIv1___Sc0000033	1435427	1435837	411	131	71	0.46564885496183206	.	CACCCGGUCAAUUUUGCGUCAAAAAUAAUUU	13	2	112	7	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1528802-1529229	Cluster_6265	Pocillopora_meandrina_HIv1___Sc0000033	1528802	1529229	428	182	96	0.8681318681318682	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	20	3	171	0	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1652823-1653253	Cluster_6266	Pocillopora_meandrina_HIv1___Sc0000033	1652823	1653253	431	629	157	0.9841017488076311	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	185	2	611	0	3	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1653602-1654021	Cluster_6267	Pocillopora_meandrina_HIv1___Sc0000033	1653602	1654021	420	166	95	0.8674698795180723	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	23	2	150	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1655295-1655801	Cluster_6268	Pocillopora_meandrina_HIv1___Sc0000033	1655295	1655801	507	577	217	0.49913344887348354	.	UAAGUCUGUAACCCCUGUGGCAC	161	5	317	11	4	217	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1687808-1688227	Cluster_6269	Pocillopora_meandrina_HIv1___Sc0000033	1687808	1688227	420	270	38	0.9925925925925926	+	CACUCUCAUGACCACUUU	64	264	0	6	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1689820-1690239	Cluster_6270	Pocillopora_meandrina_HIv1___Sc0000033	1689820	1690239	420	123	43	0.0975609756097561	-	CCGGGCUACUUCUUCGCAGU	35	79	5	16	1	18	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1752361-1752775	Cluster_6271	Pocillopora_meandrina_HIv1___Sc0000033	1752361	1752775	415	81	26	1.0	+	UGAUAUAUGUUCAUGUUUGGGUGUAAGC	24	0	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1935370-1935788	Cluster_6272	Pocillopora_meandrina_HIv1___Sc0000033	1935370	1935788	419	4080	12	1.0	+	AACCCCGCAUCUCCACCA	3700	4080	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2087740-2088163	Cluster_6273	Pocillopora_meandrina_HIv1___Sc0000033	2087740	2088163	424	216	107	0.9537037037037037	+	UCAAAAGCUGCCGAUAAAUCUAAA	42	2	153	1	3	6	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2088176-2088584	Cluster_6274	Pocillopora_meandrina_HIv1___Sc0000033	2088176	2088584	409	146	83	0.8424657534246576	+	UCAGACUAGCAACAUGAUCUUCGGUGA	18	1	132	2	0	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2089472-2090403	Cluster_6275	Pocillopora_meandrina_HIv1___Sc0000033	2089472	2090403	932	981	316	0.9439347604485219	+	UAAUGACUUCAGAGUAGACAGAGACGGU	84	7	947	6	3	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2227624-2228244	Cluster_6276	Pocillopora_meandrina_HIv1___Sc0000033	2227624	2228244	621	763	171	0.6618610747051114	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	132	6	603	1	7	119	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2528639-2529055	Cluster_6277	Pocillopora_meandrina_HIv1___Sc0000033	2528639	2529055	417	130	78	0.19230769230769232	-	UUCUAGACGAGAUCUUUAGUAAAAAGCA	8	24	70	18	10	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2644759-2645166	Cluster_6278	Pocillopora_meandrina_HIv1___Sc0000033	2644759	2645166	408	152	88	0.42105263157894735	.	UUACUGAACAGACGCACGGC	23	88	7	35	10	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2647969-2648391	Cluster_6279	Pocillopora_meandrina_HIv1___Sc0000033	2647969	2648391	423	216	130	0.9814814814814815	+	GAUCAAAGUUGGCCGAGAAAGGAAAGCA	12	56	83	22	23	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2718101-2718523	Cluster_6280	Pocillopora_meandrina_HIv1___Sc0000033	2718101	2718523	423	303	225	0.0	-	UGAGUAUGUAGACAUUAAGAGACU	5	53	125	29	32	23	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2718875-2719527	Cluster_6281	Pocillopora_meandrina_HIv1___Sc0000033	2718875	2719527	653	579	420	0.0	-	AAUGACGAGAAUCGAUGAAUACGUGGACGU	12	108	311	33	40	35	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2866422-2867925	Cluster_6282	Pocillopora_meandrina_HIv1___Sc0000033	2866422	2867925	1504	1740	764	0.04252873563218391	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	48	20	1627	5	20	29	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2905215-2905624	Cluster_6283	Pocillopora_meandrina_HIv1___Sc0000033	2905215	2905624	410	83	15	0.1686746987951807	-	UGACAUCUCAUCUACAUCUACAUCUACUUU	53	2	78	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2910222-2910663	Cluster_6284	Pocillopora_meandrina_HIv1___Sc0000033	2910222	2910663	442	561	120	0.22281639928698752	.	UGUCAAAUUCUCGUCUUCCUAACCUUU	191	5	535	0	4	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2913085-2913492	Cluster_6285	Pocillopora_meandrina_HIv1___Sc0000033	2913085	2913492	408	68	26	0.029411764705882353	-	UCUUUCCAUUUACAGACUCAAGUGGCUGU	14	0	67	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3079767-3080198	Cluster_6286	Pocillopora_meandrina_HIv1___Sc0000033	3079767	3080198	432	218	80	0.0	-	UGUCUGAACUCUAAAACUUCAUUUGGGAUC	43	2	215	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3082788-3083404	Cluster_6287	Pocillopora_meandrina_HIv1___Sc0000033	3082788	3083404	617	640	246	0.3796875	.	UGCAAGAACAAGUUCGCGACGUGGUAUU	99	18	577	12	9	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3084205-3084715	Cluster_6288	Pocillopora_meandrina_HIv1___Sc0000033	3084205	3084715	511	608	226	0.001644736842105263	-	UGUAAAGCGACUGAUCUCACGUGAUAAAUG	43	4	587	0	3	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3084987-3085943	Cluster_6289	Pocillopora_meandrina_HIv1___Sc0000033	3084987	3085943	957	2128	473	0.01832706766917293	-	UGAUUGACGUUGACGACAGAAGAAAAACA	224	9	2050	8	14	24	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3086826-3087460	Cluster_6290	Pocillopora_meandrina_HIv1___Sc0000033	3086826	3087460	635	1629	300	0.006752608962553714	-	UCACUCACGAUAGAAUUUUAAACAGAU	194	3	1602	1	4	14	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3093993-3096069	Cluster_6291	Pocillopora_meandrina_HIv1___Sc0000033	3093993	3096069	2077	14630	2097	0.04859876965140123	-	UGUUAGCUCGUCGACCUGAACGCCACUUUC	1540	331	13599	46	149	224	281	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3096363-3097773	Cluster_6292	Pocillopora_meandrina_HIv1___Sc0000033	3096363	3097773	1411	1972	664	0.012170385395537525	-	UAAGACAAGUACUUCAAACACUCUCUAGUAG	214	11	1902	8	8	20	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3098435-3101538	Cluster_6293	Pocillopora_meandrina_HIv1___Sc0000033	3098435	3101538	3104	9217	2395	0.16686557448193556	-	UGUUAAAUCUCCUCUAAACUUUGUAAUGA	381	162	7952	140	109	446	408	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3101625-3102139	Cluster_6294	Pocillopora_meandrina_HIv1___Sc0000033	3101625	3102139	515	7939	668	0.22307595415039677	.	UGAUUUCUCUGAUAUUACCAUCAGCGC	940	67	7242	32	293	120	185	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3102350-3102782	Cluster_6295	Pocillopora_meandrina_HIv1___Sc0000033	3102350	3102782	433	3211	252	0.015882902522578637	-	UGCACUAAGCAAUGAUUUGUCACCUGAAUU	1064	24	3160	1	3	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3102834-3103842	Cluster_6296	Pocillopora_meandrina_HIv1___Sc0000033	3102834	3103842	1009	1250	408	0.0104	-	UAAAACGAUAUUGCUGACAGAAAAAUAACA	120	15	1199	5	7	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3103946-3104677	Cluster_6297	Pocillopora_meandrina_HIv1___Sc0000033	3103946	3104677	732	3421	628	0.0043846828412744815	-	UGAUCAAUCAAGGAAAAUGUCUCGUACUGUU	302	17	3344	2	9	17	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3104763-3110355	Cluster_6298	Pocillopora_meandrina_HIv1___Sc0000033	3104763	3110355	5593	31575	5610	0.006587490102929533	-	UGCAAAGUCCCAUAUAUCCAUUGUAACAUU	1704	268	30237	220	216	316	318	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3110696-3111545	Cluster_6299	Pocillopora_meandrina_HIv1___Sc0000033	3110696	3111545	850	1590	379	0.3836477987421384	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	194	21	1518	9	6	16	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3111595-3112752	Cluster_6300	Pocillopora_meandrina_HIv1___Sc0000033	3111595	3112752	1158	2489	909	0.0004017677782241864	-	UUACCGGUUUGAUGCCAAGACAUUUGA	110	23	2299	26	38	59	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3112803-3117488	Cluster_6301	Pocillopora_meandrina_HIv1___Sc0000033	3112803	3117488	4686	61721	6116	0.0010045203415369162	-	UAGGUGCUGCCCUGCAAAUUCCCAUAUAUC	5064	2118	55140	729	1097	1459	1178	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3117976-3118918	Cluster_6302	Pocillopora_meandrina_HIv1___Sc0000033	3117976	3118918	943	27542	713	0.006971171302011473	-	UGCUAUCAACUUAAAUUUAUGAACCUCACU	10757	114	26616	115	123	325	249	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3119235-3125163	Cluster_6303	Pocillopora_meandrina_HIv1___Sc0000033	3119235	3125163	5929	89450	6775	0.0006819452207937395	-	UAGGUGCUGCCCUGCAAAUUCCCAUAUAUC	18180	4834	80580	880	940	1280	936	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3125753-3126547	Cluster_6304	Pocillopora_meandrina_HIv1___Sc0000033	3125753	3126547	795	1859	485	0.0	-	UGAUCUAACUGAUGUUGACUCAUUCUGAC	113	7	1780	7	17	30	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3126776-3127230	Cluster_6305	Pocillopora_meandrina_HIv1___Sc0000033	3126776	3127230	455	325	151	0.0	-	UGAGGACUUUGCAUCAGAAAAGACAGUUGUU	35	2	305	7	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3127267-3129880	Cluster_6306	Pocillopora_meandrina_HIv1___Sc0000033	3127267	3129880	2614	8020	1805	0.0006234413965087282	-	UAUCAGCAAAGUGAAGAUAAUGUAGAACCUA	862	115	7619	40	45	114	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3130174-3130645	Cluster_6307	Pocillopora_meandrina_HIv1___Sc0000033	3130174	3130645	472	369	146	0.0	-	UCAUCCGACCUUUCGAAAUCUAGCUUGUU	42	6	360	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:32926-33504	Cluster_6308	Pocillopora_meandrina_HIv1___Sc0000034	32926	33504	579	824	108	0.0012135922330097086	-	ACUGUGUACGAACUCUGUCAAAUGGAUG	209	9	726	2	5	38	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:167436-167927	Cluster_6309	Pocillopora_meandrina_HIv1___Sc0000034	167436	167927	492	27854	988	3.590148632153371e-05	-	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	8119	781	26511	78	107	267	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:215119-215548	Cluster_6310	Pocillopora_meandrina_HIv1___Sc0000034	215119	215548	430	531	128	0.07532956685499058	-	UGCAGUAGCUUUGAAAUCGUUGGCGGGU	67	4	505	1	3	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:218602-219029	Cluster_6311	Pocillopora_meandrina_HIv1___Sc0000034	218602	219029	428	193	54	0.025906735751295335	-	UUUGAGACAUAAACUGUUCAGUUUGAGC	82	1	189	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:233014-234459	Cluster_6312	Pocillopora_meandrina_HIv1___Sc0000034	233014	234459	1446	4326	1312	0.7057327785483125	.	UGCGACUUUCCUUUUCUUUGGCACAAAG	206	52	3784	33	43	115	299	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:234948-235374	Cluster_6313	Pocillopora_meandrina_HIv1___Sc0000034	234948	235374	427	230	135	0.004347826086956522	-	UCGGCUAACGUUAAACUUCACAGCGUUCUUU	16	4	220	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:236037-236577	Cluster_6314	Pocillopora_meandrina_HIv1___Sc0000034	236037	236577	541	296	149	0.05405405405405406	-	UUGGACAACCUCAUGAGAGUAACCCUCGUC	20	10	268	3	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:251674-252102	Cluster_6315	Pocillopora_meandrina_HIv1___Sc0000034	251674	252102	429	167	81	0.08982035928143713	-	UUAGAUCAAUGACUUCUGAGAUGAUGCCUU	15	2	151	3	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:252438-252864	Cluster_6316	Pocillopora_meandrina_HIv1___Sc0000034	252438	252864	427	188	57	0.07446808510638298	-	UUGAAUGUUUUCUGCACUGUAGAGAAGAC	25	3	167	1	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:254122-254550	Cluster_6317	Pocillopora_meandrina_HIv1___Sc0000034	254122	254550	429	148	59	0.0472972972972973	-	UAAUGCUGCUUAAUUCUUCCUCCAAUAGGA	29	1	143	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:254736-255177	Cluster_6318	Pocillopora_meandrina_HIv1___Sc0000034	254736	255177	442	215	92	0.4418604651162791	.	UGAAGACAUAGUAGAAAGAUCACU	23	7	150	0	2	5	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:264353-264780	Cluster_6319	Pocillopora_meandrina_HIv1___Sc0000034	264353	264780	428	194	90	0.0	-	UAACGAUCUUGCUGUCGCUGUUGGGAGC	20	5	182	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:268956-269690	Cluster_6320	Pocillopora_meandrina_HIv1___Sc0000034	268956	269690	735	376	145	0.018617021276595744	-	UAAAUGGCCAUUAUUGAUCUCAGUACAUC	33	1	356	1	7	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:273601-274030	Cluster_6321	Pocillopora_meandrina_HIv1___Sc0000034	273601	274030	430	304	63	0.881578947368421	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	139	6	270	1	1	1	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:281232-281664	Cluster_6322	Pocillopora_meandrina_HIv1___Sc0000034	281232	281664	433	3593	195	0.0	-	UGAACAGACUUGAUGACUACUGCAUAUGCUU	1004	1	3581	1	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:284152-284563	Cluster_6323	Pocillopora_meandrina_HIv1___Sc0000034	284152	284563	412	116	59	0.0	-	UGUGUCGACGAUAGUAACACCAGCUUGAGG	8	3	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:300245-301292	Cluster_6324	Pocillopora_meandrina_HIv1___Sc0000034	300245	301292	1048	4574	625	0.0006558810668998689	-	UGACAGCUGGCUCUUCUGAGCAUUUAGGAG	521	69	4365	55	15	21	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:303272-303701	Cluster_6325	Pocillopora_meandrina_HIv1___Sc0000034	303272	303701	430	93	36	0.043010752688172046	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	32	0	92	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:304345-304926	Cluster_6326	Pocillopora_meandrina_HIv1___Sc0000034	304345	304926	582	447	185	0.02237136465324385	-	UGUAAAGACGUUUUGAGGCUUUGGAGACA	36	2	425	4	3	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:306994-307423	Cluster_6327	Pocillopora_meandrina_HIv1___Sc0000034	306994	307423	430	332	109	0.0	-	UGAUCAACCAGUAUCGAACAGGAUUUAAGU	88	2	321	0	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:309422-309848	Cluster_6328	Pocillopora_meandrina_HIv1___Sc0000034	309422	309848	427	326	146	0.003067484662576687	-	UGUUCUGUGUUCGUUCUCUGUGAAGGC	34	3	312	2	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:309881-311240	Cluster_6329	Pocillopora_meandrina_HIv1___Sc0000034	309881	311240	1360	2601	652	0.0	-	UGUGAGACAUUGUGAAUCUUCUGACAGCUGC	175	20	2541	7	9	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:311570-311999	Cluster_6330	Pocillopora_meandrina_HIv1___Sc0000034	311570	311999	430	521	130	0.03262955854126679	-	UUCAUUGUGAGGAGAUGAUUCGGUGUUA	86	14	492	4	6	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:377601-378038	Cluster_6331	Pocillopora_meandrina_HIv1___Sc0000034	377601	378038	438	1036	166	0.9343629343629344	+	UGAGACAGUACACACGAUUUGAUAU	252	6	1001	3	0	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:408804-409230	Cluster_6332	Pocillopora_meandrina_HIv1___Sc0000034	408804	409230	427	148	56	0.30405405405405406	.	UGUGUGCAGUUUUCUCUAAUCUUGUUUAG	15	0	129	0	0	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:443822-444250	Cluster_6333	Pocillopora_meandrina_HIv1___Sc0000034	443822	444250	429	187	40	0.9679144385026738	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	80	0	177	0	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:552737-553159	Cluster_6334	Pocillopora_meandrina_HIv1___Sc0000034	552737	553159	423	73	15	0.958904109589041	+	AGGCUGGACUCUAGUGUAUAGCUACACAUU	50	2	71	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:564007-564436	Cluster_6335	Pocillopora_meandrina_HIv1___Sc0000034	564007	564436	430	3417	176	0.0	-	UGGAACAUGGUAGGAGAGUGCAUGCAUG	1068	43	3288	8	20	19	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:674187-674705	Cluster_6336	Pocillopora_meandrina_HIv1___Sc0000034	674187	674705	519	267	114	0.9925093632958801	+	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	62	3	260	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:832827-833649	Cluster_6337	Pocillopora_meandrina_HIv1___Sc0000034	832827	833649	823	2055	96	0.004379562043795621	-	UUGGACUGUGCAUAACCAUUUGU	1158	55	731	0	28	1195	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:864099-864526	Cluster_6338	Pocillopora_meandrina_HIv1___Sc0000034	864099	864526	428	78	22	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	21	0	78	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:909162-909585	Cluster_6339	Pocillopora_meandrina_HIv1___Sc0000034	909162	909585	424	108	34	0.8518518518518519	+	AGCAUGACGAAGGUUAGAGAUCGAC	37	2	69	1	2	2	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1411820-1412249	Cluster_6340	Pocillopora_meandrina_HIv1___Sc0000034	1411820	1412249	430	78	14	0.0	-	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	51	1	77	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1425587-1426014	Cluster_6341	Pocillopora_meandrina_HIv1___Sc0000034	1425587	1426014	428	147	60	0.891156462585034	+	UUAAACCGACUCACAGUCCGAUUCGAAU	39	1	140	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1690392-1690810	Cluster_6342	Pocillopora_meandrina_HIv1___Sc0000034	1690392	1690810	419	294	9	0.01020408163265306	-	UAUUAAUGCUGUAGGUGAU	201	292	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1758627-1759046	Cluster_6343	Pocillopora_meandrina_HIv1___Sc0000034	1758627	1759046	420	79	29	1.0	+	GAUUGGCUAGUUGGACACAUAUGUAG	12	15	33	14	10	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2059786-2061107	Cluster_6344	Pocillopora_meandrina_HIv1___Sc0000034	2059786	2061107	1322	1539	514	0.8752436647173489	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	114	23	1419	6	5	48	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2061327-2061780	Cluster_6345	Pocillopora_meandrina_HIv1___Sc0000034	2061327	2061780	454	412	198	0.5364077669902912	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	24	2	388	0	2	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2061900-2062554	Cluster_6346	Pocillopora_meandrina_HIv1___Sc0000034	2061900	2062554	655	620	281	0.8161290322580645	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	111	3	567	6	1	11	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2161700-2162206	Cluster_6347	Pocillopora_meandrina_HIv1___Sc0000034	2161700	2162206	507	431	173	0.7424593967517401	.	UAAGACGCACUCUACUCUGUUGUCAAUAC	42	19	361	5	9	22	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2221418-2221854	Cluster_6348	Pocillopora_meandrina_HIv1___Sc0000034	2221418	2221854	437	1694	327	1.0	+	GUCUCCCCUUGUCAGAGUGUAUGAAGU	211	130	1306	45	33	96	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2262728-2263202	Cluster_6349	Pocillopora_meandrina_HIv1___Sc0000034	2262728	2263202	475	274	118	0.0072992700729927005	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	36	94	133	9	10	17	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2440726-2441146	Cluster_6350	Pocillopora_meandrina_HIv1___Sc0000034	2440726	2441146	421	131	65	0.5267175572519084	.	CCAAUACCGAAACAACAUAGAUGAACUAACA	12	1	122	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2581784-2582380	Cluster_6351	Pocillopora_meandrina_HIv1___Sc0000034	2581784	2582380	597	5729	500	0.9958107872229011	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	868	12	5661	2	4	9	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2626176-2626794	Cluster_6352	Pocillopora_meandrina_HIv1___Sc0000034	2626176	2626794	619	946	203	0.9587737843551797	+	UUGUGUGUUUGGCUGGAGCAUCUGCGGC	139	20	876	4	7	18	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2727977-2728403	Cluster_6353	Pocillopora_meandrina_HIv1___Sc0000034	2727977	2728403	427	81	32	0.9506172839506173	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	27	0	79	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2746578-2747174	Cluster_6354	Pocillopora_meandrina_HIv1___Sc0000034	2746578	2747174	597	5631	470	0.9978689397975493	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	861	9	5579	1	5	11	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2812994-2813594	Cluster_6355	Pocillopora_meandrina_HIv1___Sc0000034	2812994	2813594	601	2771	285	0.9801515698303861	+	UAUCAUGGUCUAAAAUUGGUGCUUCAGUU	871	5	2723	2	4	12	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2821751-2822178	Cluster_6356	Pocillopora_meandrina_HIv1___Sc0000034	2821751	2822178	428	245	96	0.0	-	UGAGUGUCUUGAAAGUUCUGUCUGGUC	39	3	239	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2830459-2830887	Cluster_6357	Pocillopora_meandrina_HIv1___Sc0000034	2830459	2830887	429	157	21	0.006369426751592357	-	UGUUAACCAGUGUUUAGUUGGCAGUGUGG	65	2	155	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2836053-2836475	Cluster_6358	Pocillopora_meandrina_HIv1___Sc0000034	2836053	2836475	423	164	85	0.18902439024390244	-	UCGGGAAAUCUCAAUGCAUGGAGCAGG	15	1	149	1	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2850192-2850828	Cluster_6359	Pocillopora_meandrina_HIv1___Sc0000034	2850192	2850828	637	669	303	0.9446935724962631	+	UAAUCAUUACAAAACUCUCUGACUCUGG	34	16	630	2	3	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2851262-2853851	Cluster_6360	Pocillopora_meandrina_HIv1___Sc0000034	2851262	2853851	2590	8462	1972	0.8707161427558496	+	UGAAUAAACGAGCCAAGGGAAAUCCUGA	393	59	7851	41	52	101	358	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2867825-2868716	Cluster_6361	Pocillopora_meandrina_HIv1___Sc0000034	2867825	2868716	892	308	125	0.6428571428571429	.	UACGUAAUCUAACCCUUGCAAUGACUUGC	41	7	229	0	3	33	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2904544-2905250	Cluster_6362	Pocillopora_meandrina_HIv1___Sc0000034	2904544	2905250	707	427	108	0.9882903981264637	+	UAGGACAACUGAGAAUCCACGUAGACUC	105	0	419	0	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2907200-2907622	Cluster_6363	Pocillopora_meandrina_HIv1___Sc0000034	2907200	2907622	423	100	58	0.9	+	UGCUUGAAUUCUGCCGAACUGUACUGC	16	3	92	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2908284-2909080	Cluster_6364	Pocillopora_meandrina_HIv1___Sc0000034	2908284	2909080	797	2321	579	0.9198621283929341	+	UCCGUAUAUGAAUGUAUCGUCUGCAAU	262	20	2195	18	6	40	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2910217-2910646	Cluster_6365	Pocillopora_meandrina_HIv1___Sc0000034	2910217	2910646	430	222	114	0.8513513513513513	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	37	1	204	1	0	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2937155-2937903	Cluster_6366	Pocillopora_meandrina_HIv1___Sc0000034	2937155	2937903	749	883	360	0.028312570781426953	-	UAAGUAAGUAGACAUGGAUAGGCCUUGA	46	9	851	5	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2946021-2946448	Cluster_6367	Pocillopora_meandrina_HIv1___Sc0000034	2946021	2946448	428	112	21	0.9821428571428571	+	UAACCCGAGAACUGACACGUGAGUAGUC	68	1	99	1	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2950488-2950915	Cluster_6368	Pocillopora_meandrina_HIv1___Sc0000034	2950488	2950915	428	105	17	0.9809523809523809	+	UAACCCGAGAACUGACACGUGAGUAGUC	60	0	93	0	0	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2954955-2955382	Cluster_6369	Pocillopora_meandrina_HIv1___Sc0000034	2954955	2955382	428	94	13	0.9787234042553191	+	UAACCCGAGAACUGACACGUGAGUAGUC	63	0	87	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2959422-2959849	Cluster_6370	Pocillopora_meandrina_HIv1___Sc0000034	2959422	2959849	428	106	18	0.9811320754716981	+	UAACCCGAGAACUGACACGUGAGUAGUC	67	0	94	1	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2963889-2964316	Cluster_6371	Pocillopora_meandrina_HIv1___Sc0000034	2963889	2964316	428	101	13	0.9900990099009901	+	UAACCCGAGAACUGACACGUGAGUAGUC	67	1	94	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2976051-2976606	Cluster_6372	Pocillopora_meandrina_HIv1___Sc0000034	2976051	2976606	556	3473	475	0.9873308378923121	+	UGUACGUGCUCGUGAUCUCGUAAUGCUGAC	429	16	3399	7	6	15	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2982314-2982753	Cluster_6373	Pocillopora_meandrina_HIv1___Sc0000034	2982314	2982753	440	249	120	0.7188755020080321	.	UACGCUUAAACUUUUCCUUGAUCAAUUUG	20	9	207	2	7	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3000361-3000809	Cluster_6374	Pocillopora_meandrina_HIv1___Sc0000034	3000361	3000809	449	391	61	0.5575447570332481	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	130	1	388	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3068438-3068862	Cluster_6375	Pocillopora_meandrina_HIv1___Sc0000034	3068438	3068862	425	114	56	0.7894736842105263	.	UAACAUCGAACUGGACCUAAAUUUAAG	13	20	81	7	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3069260-3069687	Cluster_6376	Pocillopora_meandrina_HIv1___Sc0000034	3069260	3069687	428	154	63	0.961038961038961	+	UUGACCGGGUGGAAAUAAGAGAGACAGC	23	6	130	4	0	0	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:64573-65019	Cluster_6377	Pocillopora_meandrina_HIv1___Sc0000035	64573	65019	447	483	118	0.2443064182194617	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	189	1	457	4	2	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:67988-68407	Cluster_6378	Pocillopora_meandrina_HIv1___Sc0000035	67988	68407	420	113	50	0.30973451327433627	.	UCGAAGAUACAAACAUAUGAACCAGCA	14	0	110	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:144281-144705	Cluster_6379	Pocillopora_meandrina_HIv1___Sc0000035	144281	144705	425	143	60	0.9440559440559441	+	UAACACAAUGAACCAAGGCACGUCCAGAUA	18	0	130	0	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:148078-148501	Cluster_6380	Pocillopora_meandrina_HIv1___Sc0000035	148078	148501	424	92	34	0.9021739130434783	+	UACGUGUAGACUGAGCCAUUGCCUAGU	23	1	78	2	0	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:148904-150074	Cluster_6381	Pocillopora_meandrina_HIv1___Sc0000035	148904	150074	1171	1187	426	0.8534119629317607	+	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	107	11	1115	7	5	12	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:214892-215320	Cluster_6382	Pocillopora_meandrina_HIv1___Sc0000035	214892	215320	429	148	33	1.0	+	AUUGCAAGCAAACGGCUCGGAGUCUUCUU	38	1	143	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:218978-219411	Cluster_6383	Pocillopora_meandrina_HIv1___Sc0000035	218978	219411	434	1008	155	0.9990079365079365	+	AUUGCAAACAAACGGCUACGAGUCUUCUUC	220	13	822	11	8	6	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:220024-220453	Cluster_6384	Pocillopora_meandrina_HIv1___Sc0000035	220024	220453	430	199	55	1.0	+	AUUGUAAGCCUUCUUCGUGCAAACCUGA	52	10	179	1	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:271304-271756	Cluster_6385	Pocillopora_meandrina_HIv1___Sc0000035	271304	271756	453	211	79	0.976303317535545	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	39	1	206	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:271912-272396	Cluster_6386	Pocillopora_meandrina_HIv1___Sc0000035	271912	272396	485	340	192	0.8529411764705882	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	27	3	296	5	3	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:272572-275080	Cluster_6387	Pocillopora_meandrina_HIv1___Sc0000035	272572	275080	2509	4242	1375	0.925035360678925	+	UGUACAACCAUCCGAUACUCUUGU	668	22	3003	17	24	81	1095	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:275279-276534	Cluster_6388	Pocillopora_meandrina_HIv1___Sc0000035	275279	276534	1256	1539	705	0.8869395711500975	+	UGAUCAGAUUCGUAACAGGCAAAGCAUA	53	49	1375	7	30	13	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:277385-278555	Cluster_6389	Pocillopora_meandrina_HIv1___Sc0000035	277385	278555	1171	1356	552	0.8768436578171092	+	UACAAUAACCUCUGAUUUCACUAAAUG	65	9	1261	8	9	25	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:282145-282573	Cluster_6390	Pocillopora_meandrina_HIv1___Sc0000035	282145	282573	429	298	47	0.9966442953020134	+	AUUGCAAGCGAACGGCUAGGAGUCUUCUU	112	4	284	1	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:307392-307920	Cluster_6391	Pocillopora_meandrina_HIv1___Sc0000035	307392	307920	529	160	70	0.8625	+	UGCAUGUGCUUUGUCUUGGAUUUCAU	15	3	147	0	0	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:307939-308362	Cluster_6392	Pocillopora_meandrina_HIv1___Sc0000035	307939	308362	424	99	40	0.797979797979798	.	UGUUACAAAACCAUUAGAACUAUCAGUU	19	1	82	1	2	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:309343-309764	Cluster_6393	Pocillopora_meandrina_HIv1___Sc0000035	309343	309764	422	133	62	0.3233082706766917	.	UAUGCAUUCAAUGAUCGUGGUCGG	25	0	65	4	3	9	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:309811-310471	Cluster_6394	Pocillopora_meandrina_HIv1___Sc0000035	309811	310471	661	301	139	0.5647840531561462	.	UAUGCAUUCAAUGAUCGUGGUCGG	27	2	231	2	2	14	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:412061-412557	Cluster_6395	Pocillopora_meandrina_HIv1___Sc0000035	412061	412557	497	865	265	0.14566473988439307	-	AAUGGGAAAACGAGAACAGCGUGA	50	21	589	14	14	70	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:578022-578474	Cluster_6396	Pocillopora_meandrina_HIv1___Sc0000035	578022	578474	453	261	82	0.9808429118773946	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	51	2	254	3	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:578632-579059	Cluster_6397	Pocillopora_meandrina_HIv1___Sc0000035	578632	579059	428	338	204	0.8550295857988166	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	21	1	307	1	1	11	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:579393-581800	Cluster_6398	Pocillopora_meandrina_HIv1___Sc0000035	579393	581800	2408	4262	1315	0.9279680900985453	+	UGUACAACCAUCCGAUACUCUUGU	644	34	3037	20	20	84	1067	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:581999-583807	Cluster_6399	Pocillopora_meandrina_HIv1___Sc0000035	581999	583807	1809	1876	867	0.8049040511727079	+	UGAUCAGAUUCGUAACAGGCAAAGCAUA	56	75	1660	15	21	23	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:584116-585285	Cluster_6400	Pocillopora_meandrina_HIv1___Sc0000035	584116	585285	1170	3920	904	0.8887755102040816	+	UGCUAACACGGGACGAUUUGGAUGAAGCC	401	23	3672	15	40	45	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:593477-593906	Cluster_6401	Pocillopora_meandrina_HIv1___Sc0000035	593477	593906	430	1783	67	1.0	+	AUUGCAAGCAAACGGCUAGGAGUCUUCUU	1216	1	1779	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:667118-667546	Cluster_6402	Pocillopora_meandrina_HIv1___Sc0000035	667118	667546	429	146	54	1.0	+	UAAGUUGAUCUCGGUUGUCGAAAGGCAGUA	24	0	146	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:672252-672704	Cluster_6403	Pocillopora_meandrina_HIv1___Sc0000035	672252	672704	453	247	94	0.016194331983805668	-	UGAACACGCGUACUUGUAAUUAUGAAAUG	26	2	241	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:676390-676797	Cluster_6404	Pocillopora_meandrina_HIv1___Sc0000035	676390	676797	408	103	50	0.8446601941747572	+	UAAGACGCACUCUACUCUGUUGUCAAUAC	14	6	83	6	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:677758-678185	Cluster_6405	Pocillopora_meandrina_HIv1___Sc0000035	677758	678185	428	197	80	0.22842639593908629	.	UGUACUGUUUGUAUUUUUUUUCCUGGG	37	4	178	2	4	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:757961-758385	Cluster_6406	Pocillopora_meandrina_HIv1___Sc0000035	757961	758385	425	116	26	0.0	-	UACUGGUGCGAUGCAACUCUCGAUA	56	0	93	15	8	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:763025-763446	Cluster_6407	Pocillopora_meandrina_HIv1___Sc0000035	763025	763446	422	135	52	1.0	+	UUCGAGCGUAAGCCCUUCUCCA	20	4	10	18	43	40	20	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:954470-955072	Cluster_6408	Pocillopora_meandrina_HIv1___Sc0000035	954470	955072	603	719	182	0.030598052851182198	-	UCUGUAAACUCCGUAUUUAAUAACAAUUAA	88	8	687	4	1	1	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:964606-965035	Cluster_6409	Pocillopora_meandrina_HIv1___Sc0000035	964606	965035	430	167	37	1.0	+	UACUCUUCAAAAAAAUCUCUGGAACCAAGA	77	0	167	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:981170-981716	Cluster_6410	Pocillopora_meandrina_HIv1___Sc0000035	981170	981716	547	2536	135	0.9609621451104101	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	709	2	2527	1	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1000950-1001370	Cluster_6411	Pocillopora_meandrina_HIv1___Sc0000035	1000950	1001370	421	1554	27	0.9987129987129987	+	CGGCCUGAAAAAAAAAAA	863	1466	0	54	18	16	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1080556-1080981	Cluster_6412	Pocillopora_meandrina_HIv1___Sc0000035	1080556	1080981	426	103	32	0.009708737864077669	-	UAAUCGUUGGCUCUUUCUCGAGACGUG	25	1	101	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1143856-1144329	Cluster_6413	Pocillopora_meandrina_HIv1___Sc0000035	1143856	1144329	474	1364	224	1.0	+	AUGAAUGAUGAAUGUGAAU	240	631	598	46	19	35	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1144745-1145576	Cluster_6414	Pocillopora_meandrina_HIv1___Sc0000035	1144745	1145576	832	4559	540	1.0	+	GAUUACAAAAUAUACCGGAAGUCUGAUA	894	447	2580	350	335	414	433	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1146812-1147303	Cluster_6415	Pocillopora_meandrina_HIv1___Sc0000035	1146812	1147303	492	655	190	0.9969465648854962	+	UGUGUCUUGGCUUUGAUUGGUGCCGUCA	193	133	368	70	32	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1472413-1473308	Cluster_6416	Pocillopora_meandrina_HIv1___Sc0000035	1472413	1473308	896	881	380	0.30192962542565266	.	UCUUCUCCAAAGACGUCUGAAUAUUCACUC	49	8	805	7	5	17	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1473587-1474099	Cluster_6417	Pocillopora_meandrina_HIv1___Sc0000035	1473587	1474099	513	717	273	0.06555090655509066	-	UGUGAUCCGUAUAAAGAAUAACUCUUCUGC	42	6	680	6	6	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1474121-1474899	Cluster_6418	Pocillopora_meandrina_HIv1___Sc0000035	1474121	1474899	779	373	194	0.1447721179624665	-	UAGGUAUACCGUGAUUGGAGAAAUGGCGU	26	18	323	3	7	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1475095-1475522	Cluster_6419	Pocillopora_meandrina_HIv1___Sc0000035	1475095	1475522	428	327	149	0.03669724770642202	-	UGUUGAUGUAACCGUGAUCUUUGAAGG	16	2	301	7	2	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1581037-1581465	Cluster_6420	Pocillopora_meandrina_HIv1___Sc0000035	1581037	1581465	429	204	63	0.31862745098039214	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	35	0	156	0	5	4	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1582195-1582625	Cluster_6421	Pocillopora_meandrina_HIv1___Sc0000035	1582195	1582625	431	243	116	0.08641975308641975	-	UCUACGUCUAUCAACCAGGAAUGAAACUCGU	19	2	218	4	4	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1582977-1583395	Cluster_6422	Pocillopora_meandrina_HIv1___Sc0000035	1582977	1583395	419	267	177	0.06741573033707865	-	UCAGACACGUGGAUACUUGCGAUGAAGU	8	3	246	1	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1583480-1583908	Cluster_6423	Pocillopora_meandrina_HIv1___Sc0000035	1583480	1583908	429	204	122	0.1715686274509804	-	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	19	1	186	1	1	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1989820-1989912	Cluster_6424	Pocillopora_meandrina_HIv1___Sc0000035	1989820	1989912	93	4600	200	1.0	+	UAUUUACAACUCUCAAAACAAC	1728	614	49	387	2011	1502	37	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000035:2501614-2502039	Cluster_6425	Pocillopora_meandrina_HIv1___Sc0000035	2501614	2502039	426	100	32	0.0	-	CUUCGUAGAAAUUACCGGACUGUAACAGG	21	5	77	3	12	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2674925-2675335	Cluster_6426	Pocillopora_meandrina_HIv1___Sc0000035	2674925	2675335	411	176	102	0.42613636363636365	.	ACUGGAUACAAAACUGCUCGAUGC	24	3	124	0	2	10	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2675412-2676156	Cluster_6427	Pocillopora_meandrina_HIv1___Sc0000035	2675412	2676156	745	326	159	0.049079754601226995	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	57	1	314	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2743900-2744864	Cluster_6428	Pocillopora_meandrina_HIv1___Sc0000035	2743900	2744864	965	2300	654	0.39565217391304347	.	UGUACCUUUGUCGAUUCUGAUCAUCGCA	135	21	2161	10	26	29	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2746976-2747526	Cluster_6429	Pocillopora_meandrina_HIv1___Sc0000035	2746976	2747526	551	616	192	0.9285714285714286	+	UCCUUGUAUACUUUUGGGCCUUUCCAGA	63	4	595	2	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:84755-86650	Cluster_6430	Pocillopora_meandrina_HIv1___Sc0000036	84755	86650	1896	10799	2242	0.9642559496249653	+	CAGGUCUACUGCUUUACUUCUGAGAGUAA	765	84	10098	38	156	172	251	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:86674-87720	Cluster_6431	Pocillopora_meandrina_HIv1___Sc0000036	86674	87720	1047	2243	691	0.9598751671868034	+	UGCUUUAACUUUCUUUGGAUCAGGUCUAA	124	19	2122	15	32	22	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:87873-89407	Cluster_6432	Pocillopora_meandrina_HIv1___Sc0000036	87873	89407	1535	9400	2139	0.8748936170212765	+	UCUACGUCUUUCGCUUGUUUUUCACUGAGU	278	42	8822	35	44	185	272	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:201220-201641	Cluster_6433	Pocillopora_meandrina_HIv1___Sc0000036	201220	201641	422	207	148	0.8357487922705314	+	UAACAGCUUAAGACGCGAACGAG	22	42	53	32	14	47	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:651439-651919	Cluster_6434	Pocillopora_meandrina_HIv1___Sc0000036	651439	651919	481	589	233	0.10865874363327674	-	UAAUCUGAAGGUCGUGAGU	65	360	67	98	22	35	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:714465-714880	Cluster_6435	Pocillopora_meandrina_HIv1___Sc0000036	714465	714880	416	209	131	0.9090909090909091	+	UAAAUGACUCAGUCUACUAAAAUAGAACUA	10	39	120	13	8	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1027025-1027429	Cluster_6436	Pocillopora_meandrina_HIv1___Sc0000036	1027025	1027429	405	177	124	0.0	-	GACGGGUUUUUAUGACGAACU	12	32	81	30	13	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1284759-1285299	Cluster_6437	Pocillopora_meandrina_HIv1___Sc0000036	1284759	1285299	541	1185	420	0.9974683544303797	+	CUGCACACUUUUUAAGACCUGUC	102	233	402	104	196	182	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1286770-1287192	Cluster_6438	Pocillopora_meandrina_HIv1___Sc0000036	1286770	1287192	423	155	77	0.9935483870967742	+	UAGCACGCUGUUUCAACCAUGAAAGAACA	31	22	98	5	7	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1292308-1292851	Cluster_6439	Pocillopora_meandrina_HIv1___Sc0000036	1292308	1292851	544	1784	427	1.0	+	GUUUGACGACAAUAGACCUUGGUACACAA	285	224	1129	65	116	132	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1346400-1346823	Cluster_6440	Pocillopora_meandrina_HIv1___Sc0000036	1346400	1346823	424	150	63	1.0	+	AAGGCCAGAAAAUCUGAAGAGACU	18	29	47	11	12	14	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1389110-1389539	Cluster_6441	Pocillopora_meandrina_HIv1___Sc0000036	1389110	1389539	430	521	75	0.0	-	UCUGGAAGCGUUAUCUGCUGGUCUGCC	153	0	506	0	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1437981-1438412	Cluster_6442	Pocillopora_meandrina_HIv1___Sc0000036	1437981	1438412	432	779	182	0.0012836970474967907	-	UCUGGAAGCGUUAUCUGCCGGUCUGCCUG	161	61	686	10	6	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1504251-1504679	Cluster_6443	Pocillopora_meandrina_HIv1___Sc0000036	1504251	1504679	429	139	43	0.0	-	UCUGGAAGCAUUAUCUGCCGGUCUGCCUG	45	2	134	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1527809-1528277	Cluster_6444	Pocillopora_meandrina_HIv1___Sc0000036	1527809	1528277	469	1243	304	0.002413515687851971	-	UGUGACUGAAAAGAUCUUGAAGGAACAUA	166	17	995	21	10	39	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1532703-1533139	Cluster_6445	Pocillopora_meandrina_HIv1___Sc0000036	1532703	1533139	437	286	107	0.0034965034965034965	-	UCUGAAAGCAUUAUCUGCCGGUCUGCCUG	35	11	253	5	6	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1557087-1557516	Cluster_6446	Pocillopora_meandrina_HIv1___Sc0000036	1557087	1557516	430	331	130	0.0	-	CGUUAUCUGCUGGUCUGCCUGUACUUGUC	90	36	262	10	6	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1572102-1572553	Cluster_6447	Pocillopora_meandrina_HIv1___Sc0000036	1572102	1572553	452	456	85	0.0	-	UCUCGAAGCAUUGUCUGCUGGUCUGCCUG	69	3	449	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1597170-1597606	Cluster_6448	Pocillopora_meandrina_HIv1___Sc0000036	1597170	1597606	437	1284	256	0.0	-	UCUUGAAGCAUUAUCUGCUGGUCUGCCUG	304	244	984	20	12	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1601496-1601928	Cluster_6449	Pocillopora_meandrina_HIv1___Sc0000036	1601496	1601928	433	1072	121	0.9953358208955224	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	640	5	1058	1	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1615578-1616029	Cluster_6450	Pocillopora_meandrina_HIv1___Sc0000036	1615578	1616029	452	462	80	0.0	-	UCUCGAAGCAUUGUCUGCUGGUCUGCCUG	80	9	445	1	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1686687-1687189	Cluster_6451	Pocillopora_meandrina_HIv1___Sc0000036	1686687	1687189	503	424	151	0.7358490566037735	.	UCUGGCCACAAAUCGUGCAUUCUUGUUC	69	11	365	2	13	23	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2265604-2266026	Cluster_6452	Pocillopora_meandrina_HIv1___Sc0000036	2265604	2266026	423	117	39	0.9829059829059829	+	AAACGAUUGAAUAGCAUAACUGAUGAACUA	15	0	116	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2266549-2267225	Cluster_6453	Pocillopora_meandrina_HIv1___Sc0000036	2266549	2267225	677	954	363	0.7023060796645703	.	UGACUUUCGCUAUCUUCCAACAAUCAGGGA	43	12	837	20	8	19	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2281183-2281602	Cluster_6454	Pocillopora_meandrina_HIv1___Sc0000036	2281183	2281602	420	182	85	0.08791208791208792	-	CGUGUUUACAUGGCCUGAUG	31	84	12	30	46	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2400213-2400686	Cluster_6455	Pocillopora_meandrina_HIv1___Sc0000036	2400213	2400686	474	255060	691	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUCGCC	68078	382	254074	15	39	54	496	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2716860-2717282	Cluster_6456	Pocillopora_meandrina_HIv1___Sc0000036	2716860	2717282	423	187	40	0.9518716577540107	+	UUCGCGUCUGAAGCUGUUAGAGU	94	15	11	4	16	140	1	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2755154-2755583	Cluster_6457	Pocillopora_meandrina_HIv1___Sc0000036	2755154	2755583	430	194	30	1.0	+	UAAGACUGCAAAUGAAAAACGUCAAAUGGC	113	5	187	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2927793-2928327	Cluster_6458	Pocillopora_meandrina_HIv1___Sc0000036	2927793	2928327	535	3160	428	1.0	+	AUAAUUAACAGUUGGCAGAUAUUG	676	216	802	73	226	791	1052	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2959869-2960604	Cluster_6459	Pocillopora_meandrina_HIv1___Sc0000036	2959869	2960604	736	402	167	0.9154228855721394	+	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	25	4	365	5	2	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2960936-2961336	Cluster_6460	Pocillopora_meandrina_HIv1___Sc0000036	2960936	2961336	401	166	88	0.9819277108433735	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	23	1	159	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2961682-2962498	Cluster_6461	Pocillopora_meandrina_HIv1___Sc0000036	2961682	2962498	817	4083	995	0.9287288758265981	+	UAACUUCCCAUUCCUGAACAGAUUCGUG	306	101	3759	28	33	55	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:4441-4869	Cluster_6462	Pocillopora_meandrina_HIv1___Sc0000037	4441	4869	429	380	38	0.010526315789473684	-	UUUUUCCUGUGAACUGAUAUCAACUUAG	230	2	376	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:6786-7213	Cluster_6463	Pocillopora_meandrina_HIv1___Sc0000037	6786	7213	428	171	44	0.8538011695906432	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	63	3	161	3	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:13248-13675	Cluster_6464	Pocillopora_meandrina_HIv1___Sc0000037	13248	13675	428	83	25	0.891566265060241	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	43	0	81	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:16609-17010	Cluster_6465	Pocillopora_meandrina_HIv1___Sc0000037	16609	17010	402	86	37	0.8837209302325582	+	UGAAACUCUGAUCUGAAAAGAUUUGU	17	9	76	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:177212-177641	Cluster_6466	Pocillopora_meandrina_HIv1___Sc0000037	177212	177641	430	268	46	0.0	-	UGUGCUAGUCAAUGGGAACGUAAAUUUGAU	154	5	255	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:373185-373611	Cluster_6467	Pocillopora_meandrina_HIv1___Sc0000037	373185	373611	427	184	42	0.1358695652173913	-	UUGGUGCAUUUCGAUCCUUGCUGUUCA	36	1	180	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:657487-657914	Cluster_6468	Pocillopora_meandrina_HIv1___Sc0000037	657487	657914	428	176	71	0.13636363636363635	-	UGCUUUAACGAACUGAUGUGUUUCUUGA	49	0	169	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:695148-695559	Cluster_6469	Pocillopora_meandrina_HIv1___Sc0000037	695148	695559	412	170	141	0.0058823529411764705	-	CUCGAUGGAAAUUCUUAAUGGC	3	33	75	15	19	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:705632-706037	Cluster_6470	Pocillopora_meandrina_HIv1___Sc0000037	705632	706037	406	139	114	0.007194244604316547	-	CUAGUAACUGAUGCUCGACUUCUUUGAAUUU	4	37	74	7	7	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1082537-1083487	Cluster_6471	Pocillopora_meandrina_HIv1___Sc0000037	1082537	1083487	951	2255	716	0.08514412416851441	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	169	18	2111	9	12	30	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1083489-1084357	Cluster_6472	Pocillopora_meandrina_HIv1___Sc0000037	1083489	1084357	869	549	264	0.08925318761384335	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	30	2	521	4	2	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1084558-1086553	Cluster_6473	Pocillopora_meandrina_HIv1___Sc0000037	1084558	1086553	1996	3487	1152	0.06165758531689131	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	190	31	3214	17	22	76	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1090517-1090944	Cluster_6474	Pocillopora_meandrina_HIv1___Sc0000037	1090517	1090944	428	494	47	0.9979757085020243	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	258	0	492	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1092825-1093253	Cluster_6475	Pocillopora_meandrina_HIv1___Sc0000037	1092825	1093253	429	122	43	0.9754098360655737	+	AGUUGACAUAUGGACCGGUACAAACAAGGG	24	0	118	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1230325-1231032	Cluster_6476	Pocillopora_meandrina_HIv1___Sc0000037	1230325	1231032	708	687	202	1.0	+	UGAGAACUUCUGGUCGUGUUAAACUAAUA	112	5	671	1	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1231089-1231516	Cluster_6477	Pocillopora_meandrina_HIv1___Sc0000037	1231089	1231516	428	239	88	1.0	+	UUGGUCUUUAUCUUUUCAGGGUCUGGAA	38	5	227	0	5	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1306233-1306655	Cluster_6478	Pocillopora_meandrina_HIv1___Sc0000037	1306233	1306655	423	140	72	0.8928571428571429	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	24	0	130	3	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1307744-1308170	Cluster_6479	Pocillopora_meandrina_HIv1___Sc0000037	1307744	1308170	427	140	78	0.8428571428571429	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	17	1	125	1	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1309506-1309914	Cluster_6480	Pocillopora_meandrina_HIv1___Sc0000037	1309506	1309914	409	133	76	0.8571428571428571	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	12	2	121	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1803344-1803763	Cluster_6481	Pocillopora_meandrina_HIv1___Sc0000037	1803344	1803763	420	1734	72	0.9959630911188004	+	AUGUCUGUCUGAGUGUCUAC	559	1724	1	8	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1935822-1936401	Cluster_6482	Pocillopora_meandrina_HIv1___Sc0000037	1935822	1936401	580	432	154	0.9328703703703703	+	UAAGAUUUACACACUGAUCGACCAUGU	147	4	409	2	3	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1936420-1937055	Cluster_6483	Pocillopora_meandrina_HIv1___Sc0000037	1936420	1937055	636	524	229	0.7099236641221374	.	AAGUUUGUGAGCCCUGACAAUCCGGAAGA	34	7	440	3	10	12	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1937430-1938367	Cluster_6484	Pocillopora_meandrina_HIv1___Sc0000037	1937430	1938367	938	3615	617	0.966804979253112	+	UCGGAUGUACUCUUCUGCCCCAUGUGGAUG	440	25	3434	23	20	40	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1939237-1940796	Cluster_6485	Pocillopora_meandrina_HIv1___Sc0000037	1939237	1940796	1560	1748	670	0.9582379862700229	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	109	16	1681	2	6	16	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2093152-2093575	Cluster_6486	Pocillopora_meandrina_HIv1___Sc0000037	2093152	2093575	424	122	20	0.9918032786885246	+	UGACGUUCAAACUUUUCUAGAAGGGAAA	26	26	70	14	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2142047-2142474	Cluster_6487	Pocillopora_meandrina_HIv1___Sc0000037	2142047	2142474	428	108	44	0.05555555555555555	-	UAUUUGCACUAUUGUGGAAAAUUCCUGU	19	4	99	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2252197-2254838	Cluster_6488	Pocillopora_meandrina_HIv1___Sc0000037	2252197	2254838	2642	9897	2023	0.9945438011518642	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1302	33	9668	15	26	36	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2270053-2270481	Cluster_6489	Pocillopora_meandrina_HIv1___Sc0000037	2270053	2270481	429	175	30	1.0	+	UGUAAAUCUUGUCUGGAUCUGGGUCAACA	78	3	170	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2277242-2277672	Cluster_6490	Pocillopora_meandrina_HIv1___Sc0000037	2277242	2277672	431	222	106	0.8693693693693694	+	UCAGUGACUUUUGAGACUAUUGGUAAUAAU	19	2	215	2	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2277916-2278420	Cluster_6491	Pocillopora_meandrina_HIv1___Sc0000037	2277916	2278420	505	405	131	0.9703703703703703	+	UAGUUGACGAAUUUCUGGUGUUAUAAACGG	41	1	397	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2280208-2281531	Cluster_6492	Pocillopora_meandrina_HIv1___Sc0000037	2280208	2281531	1324	2124	612	0.902542372881356	+	UGUGUGACUAUGAUGAGCUUCAAAGGC	65	13	1937	12	48	41	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2281809-2282636	Cluster_6493	Pocillopora_meandrina_HIv1___Sc0000037	2281809	2282636	828	725	245	0.8317241379310345	+	UGUGUGACUUAAGCUUCUAGCUGCAAACAGC	88	3	668	5	9	5	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2282728-2283298	Cluster_6494	Pocillopora_meandrina_HIv1___Sc0000037	2282728	2283298	571	1248	354	0.8309294871794872	+	UCAAACCUCUCUUGGAUGAAUUUCAUGG	98	9	1137	18	30	14	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2342605-2343031	Cluster_6495	Pocillopora_meandrina_HIv1___Sc0000037	2342605	2343031	427	173	79	0.028901734104046242	-	UGUUUCGCUUAGAAUUGUUGCAGUUGGC	16	5	165	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2417449-2417876	Cluster_6496	Pocillopora_meandrina_HIv1___Sc0000037	2417449	2417876	428	119	30	1.0	+	AAUCUAACCAACAGAAAAAUUCUGCAAUCCU	27	6	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2424920-2425999	Cluster_6497	Pocillopora_meandrina_HIv1___Sc0000037	2424920	2425999	1080	939	363	0.9648562300319489	+	UGAACACGUGGAUGAUGGAACAGUUCAUUG	39	4	899	5	4	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2431072-2431714	Cluster_6498	Pocillopora_meandrina_HIv1___Sc0000037	2431072	2431714	643	572	210	1.0	+	UCGGUCUUUAUCUGCACGUAUUCGUAUGUU	57	5	564	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2432048-2432468	Cluster_6499	Pocillopora_meandrina_HIv1___Sc0000037	2432048	2432468	421	375	43	0.9973333333333333	+	AAAGAAGUACAAGUGGUAGAA	103	136	26	211	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2449003-2449426	Cluster_6500	Pocillopora_meandrina_HIv1___Sc0000037	2449003	2449426	424	77	24	1.0	+	UGUGACUUACAUCUGAUCUUGGCUCCA	17	0	75	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2464093-2464523	Cluster_6501	Pocillopora_meandrina_HIv1___Sc0000037	2464093	2464523	431	181	39	0.994475138121547	+	UAAUGCUGCUGAAUUCUUCCUCCAACAGGA	52	1	180	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2473274-2473815	Cluster_6502	Pocillopora_meandrina_HIv1___Sc0000037	2473274	2473815	542	592	150	0.7871621621621622	.	UGUGAAAGCGGAAUCGUUUUGCUAUGAGC	108	7	561	1	1	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2490869-2491294	Cluster_6503	Pocillopora_meandrina_HIv1___Sc0000037	2490869	2491294	426	96	43	0.9791666666666666	+	UUGUUGUGUUAUUGAUCGUGGGCUUCCAU	14	1	91	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2592424-2592899	Cluster_6504	Pocillopora_meandrina_HIv1___Sc0000037	2592424	2592899	476	3811	258	0.9997376016793492	+	CUGCAGUGAUGAGAACACUUUACCAUAGAUU	1816	182	3470	23	28	40	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2680229-2680657	Cluster_6505	Pocillopora_meandrina_HIv1___Sc0000037	2680229	2680657	429	116	19	1.0	+	AACUGAAGAAUCAAUCUCUGAAACCGAUA	65	0	115	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2696494-2696914	Cluster_6506	Pocillopora_meandrina_HIv1___Sc0000037	2696494	2696914	421	158	74	0.0189873417721519	-	UACUAGAAUCUAACGAACAGCUCGAACACU	22	0	154	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2733618-2734033	Cluster_6507	Pocillopora_meandrina_HIv1___Sc0000037	2733618	2734033	416	88	40	0.4431818181818182	.	CACACGAAUACGAGUAGACUUGAGG	9	1	74	1	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2790803-2791229	Cluster_6508	Pocillopora_meandrina_HIv1___Sc0000037	2790803	2791229	427	155	43	1.0	+	AGUGUGUCGGUUCUGAGCUAGCUUCU	24	2	144	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:60657-61165	Cluster_6509	Pocillopora_meandrina_HIv1___Sc0000038	60657	61165	509	877	341	0.9942987457240593	+	CAAAUGGAGGCGUGGGUUC	36	509	172	102	31	31	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:211854-212281	Cluster_6510	Pocillopora_meandrina_HIv1___Sc0000038	211854	212281	428	312	140	0.6730769230769231	.	UAGGGCUAACGAACACUGGUUGGACAGU	52	18	263	12	2	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:212683-213109	Cluster_6511	Pocillopora_meandrina_HIv1___Sc0000038	212683	213109	427	213	88	0.09389671361502347	-	UAGAAUGAACGGCUUAAACAAACACCUU	17	11	195	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:246164-246579	Cluster_6512	Pocillopora_meandrina_HIv1___Sc0000038	246164	246579	416	171	119	0.9941520467836257	+	AAAGCUAGGACCUGAUGUAAGUCA	6	35	82	13	12	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:287117-287545	Cluster_6513	Pocillopora_meandrina_HIv1___Sc0000038	287117	287545	429	171	44	0.2807017543859649	.	UCCGAGUGCUGCACCUUCUUUCAUGGGAA	63	8	154	5	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:502976-503393	Cluster_6514	Pocillopora_meandrina_HIv1___Sc0000038	502976	503393	418	79	11	0.8860759493670886	+	CUUUCCGAGGUCGCGUUU	68	71	2	2	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:628652-629098	Cluster_6515	Pocillopora_meandrina_HIv1___Sc0000038	628652	629098	447	511	163	0.5068493150684932	.	CGAUAGCACAAAAAAACUCCAGGA	99	35	288	9	11	43	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:629192-629743	Cluster_6516	Pocillopora_meandrina_HIv1___Sc0000038	629192	629743	552	645	218	0.8728682170542635	+	UACAUCCUGUAUAGAAUUCUUUAAUGAC	42	9	592	3	4	15	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:630886-631496	Cluster_6517	Pocillopora_meandrina_HIv1___Sc0000038	630886	631496	611	870	231	0.9045977011494253	+	UGGACCUUCAGAAUUUUCAGCAUUCUUA	183	14	785	8	9	23	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:631535-631961	Cluster_6518	Pocillopora_meandrina_HIv1___Sc0000038	631535	631961	427	383	66	0.9477806788511749	+	UGGGUACAGACGGUAGGUUGAUGAUCU	133	9	364	0	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:632216-632643	Cluster_6519	Pocillopora_meandrina_HIv1___Sc0000038	632216	632643	428	149	67	0.8993288590604027	+	AAACAACAGAAUGUUCGGACGGCUCGACG	20	4	134	7	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1141528-1142272	Cluster_6520	Pocillopora_meandrina_HIv1___Sc0000038	1141528	1142272	745	527	217	0.06451612903225806	-	UCAGACUUCAUGACUGUUUCAGAAAUAGUGG	54	2	507	2	4	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1216907-1217348	Cluster_6521	Pocillopora_meandrina_HIv1___Sc0000038	1216907	1217348	442	309	120	0.04854368932038835	-	GUAAACCAGGGGUCGAGAGU	53	197	41	35	20	12	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1251510-1251939	Cluster_6522	Pocillopora_meandrina_HIv1___Sc0000038	1251510	1251939	430	160	66	0.01875	-	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	35	1	154	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1252307-1253285	Cluster_6523	Pocillopora_meandrina_HIv1___Sc0000038	1252307	1253285	979	1033	385	0.07454017424975799	-	UUUACCUAGAGUCUCUAAUGAUUGAACAUU	88	7	983	0	3	12	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1257056-1257821	Cluster_6524	Pocillopora_meandrina_HIv1___Sc0000038	1257056	1257821	766	514	220	0.033073929961089495	-	UGCGACACAAAUGGCUCUUGCACAACACA	63	8	487	4	3	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1257984-1258448	Cluster_6525	Pocillopora_meandrina_HIv1___Sc0000038	1257984	1258448	465	213	77	0.0	-	UACAUGUCUUCACUGUUGAGCUGGGUGA	39	2	206	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1259181-1259624	Cluster_6526	Pocillopora_meandrina_HIv1___Sc0000038	1259181	1259624	444	237	106	0.02109704641350211	-	UGAUGGGCCGUCUGGUACGCAAACGUUC	37	7	215	3	3	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1263833-1264863	Cluster_6527	Pocillopora_meandrina_HIv1___Sc0000038	1263833	1264863	1031	1314	355	0.13622526636225266	-	UACAAUACGAGUACUGUCGAACACACGGC	127	185	1094	3	5	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1269354-1269797	Cluster_6528	Pocillopora_meandrina_HIv1___Sc0000038	1269354	1269797	444	362	175	0.0027624309392265192	-	UUGGAGAACGACGCCCGUAGAUGUGGGU	28	7	321	1	4	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1270504-1270931	Cluster_6529	Pocillopora_meandrina_HIv1___Sc0000038	1270504	1270931	428	91	35	0.01098901098901099	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	0	89	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1271207-1272255	Cluster_6530	Pocillopora_meandrina_HIv1___Sc0000038	1271207	1272255	1049	1646	391	0.6111786148238153	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	195	33	1541	17	7	24	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1272757-1273178	Cluster_6531	Pocillopora_meandrina_HIv1___Sc0000038	1272757	1273178	422	226	99	0.7964601769911505	.	UUCCAAUGCAACUGUGGAUCUGCUGAAGC	32	4	166	4	23	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1274815-1275420	Cluster_6532	Pocillopora_meandrina_HIv1___Sc0000038	1274815	1275420	606	366	137	0.00819672131147541	-	UGAAACUCUUACCUCGCUAACGCAUUUGUA	90	1	361	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1277615-1278355	Cluster_6533	Pocillopora_meandrina_HIv1___Sc0000038	1277615	1278355	741	624	277	0.003205128205128205	-	UUGGAGAACGACGCCCGUAGAUGUGGGU	32	10	575	4	8	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1278888-1281935	Cluster_6534	Pocillopora_meandrina_HIv1___Sc0000038	1278888	1281935	3048	41239	3458	0.003564586920148403	-	UGGUUUCAAGACUUCAAGAAAGAUUUCAGG	7356	197	40377	112	146	185	222	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1282338-1285466	Cluster_6535	Pocillopora_meandrina_HIv1___Sc0000038	1282338	1285466	3129	44911	3677	0.0009797154371980138	-	UUUCUACCUUAAACUUCUGACUCUUAUGGU	7511	799	42912	139	188	447	426	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1285568-1286857	Cluster_6536	Pocillopora_meandrina_HIv1___Sc0000038	1285568	1286857	1290	4679	1213	0.00042744176106005556	-	UGCCAAAAGACUGUUGUGGCUCAAGGUCAC	283	53	4466	28	48	49	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1287164-1289504	Cluster_6537	Pocillopora_meandrina_HIv1___Sc0000038	1287164	1289504	2341	35949	2604	5.5634370914350886e-05	-	UGUUUACGGGUGAUUGAAUGAGAACUGGU	5482	103	35066	60	39	86	595	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1289836-1292288	Cluster_6538	Pocillopora_meandrina_HIv1___Sc0000038	1289836	1292288	2453	372315	2527	4.834615849482293e-05	-	UUCCUGCACGGCUUCAGGCAAUUCUGGC	157594	391	369978	96	173	245	1432	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1296788-1297325	Cluster_6539	Pocillopora_meandrina_HIv1___Sc0000038	1296788	1297325	538	388	139	0.03350515463917526	-	UGACGCUAUCGGUUUUAAGUUUUUGAACA	21	8	365	3	1	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1353302-1353719	Cluster_6540	Pocillopora_meandrina_HIv1___Sc0000038	1353302	1353719	418	403	77	0.04714640198511166	-	AUCCGCCAUGUGCCUCCA	223	315	22	38	13	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1390108-1390737	Cluster_6541	Pocillopora_meandrina_HIv1___Sc0000038	1390108	1390737	630	12331	532	0.9118481874949315	+	UGUGCUGGAAUUAACUGAGUUGGAGGAAC	2296	592	8308	340	1051	1658	382	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1553779-1554205	Cluster_6542	Pocillopora_meandrina_HIv1___Sc0000038	1553779	1554205	427	172	82	0.27906976744186046	.	UCCUUCGUCUAAUAUCAUGUGUAAAAUGUU	25	11	143	1	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1718391-1718867	Cluster_6543	Pocillopora_meandrina_HIv1___Sc0000038	1718391	1718867	477	570	381	0.9982456140350877	+	UGCGGAGAGAGCCUUAGAUA	8	147	227	67	47	30	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1719658-1720066	Cluster_6544	Pocillopora_meandrina_HIv1___Sc0000038	1719658	1720066	409	247	201	0.9959514170040485	+	CACGAAAUGGAUGUCCCGAAGAGAGC	4	66	111	14	20	21	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1720833-1721301	Cluster_6545	Pocillopora_meandrina_HIv1___Sc0000038	1720833	1721301	469	366	243	1.0	+	GAUGGAUUUGAAGUCUCAGUUUG	10	69	177	38	20	36	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1721507-1721926	Cluster_6546	Pocillopora_meandrina_HIv1___Sc0000038	1721507	1721926	420	208	154	1.0	+	GUAACUGAGAUGAAUGGAAGGAUU	6	49	74	22	18	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1722230-1722757	Cluster_6547	Pocillopora_meandrina_HIv1___Sc0000038	1722230	1722757	528	654	324	1.0	+	ACUGCCCAGCGGUUUAUUGUUACA	16	76	340	59	46	63	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1724166-1724826	Cluster_6548	Pocillopora_meandrina_HIv1___Sc0000038	1724166	1724826	661	627	418	0.9984051036682615	+	UUGUGUCUGUCCCUCAAGGUU	10	137	220	87	60	62	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1849730-1850468	Cluster_6549	Pocillopora_meandrina_HIv1___Sc0000038	1849730	1850468	739	399	166	0.03007518796992481	-	UGAAUGCGUAACAUAACUCCGAUCGAGU	24	5	386	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1851234-1851661	Cluster_6550	Pocillopora_meandrina_HIv1___Sc0000038	1851234	1851661	428	205	109	0.06341463414634146	-	UGAUAGGAGCGACUCUCGAUUUUGA	14	1	192	3	0	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1851687-1852685	Cluster_6551	Pocillopora_meandrina_HIv1___Sc0000038	1851687	1852685	999	722	342	0.04847645429362881	-	UCGAAUCGUCGGCAGACAACGCAGUGUCGA	46	5	661	29	7	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1853208-1853617	Cluster_6552	Pocillopora_meandrina_HIv1___Sc0000038	1853208	1853617	410	144	73	0.13194444444444445	-	UACUCGUAACUCUAACUGAAAGUGCUCG	11	1	127	0	0	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1913940-1914919	Cluster_6553	Pocillopora_meandrina_HIv1___Sc0000038	1913940	1914919	980	9401	863	0.9329858525688757	+	UGAAUGCUGGUAUCUUGAUAGUAGAAC	2799	116	8247	61	761	130	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2000336-2000758	Cluster_6554	Pocillopora_meandrina_HIv1___Sc0000038	2000336	2000758	423	100	37	0.63	.	UUGUACCGGUCCAUAUGUCAACUGUUG	15	1	96	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2024640-2025067	Cluster_6555	Pocillopora_meandrina_HIv1___Sc0000038	2024640	2025067	428	329	136	0.3404255319148936	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	54	9	256	5	4	21	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2025163-2025948	Cluster_6556	Pocillopora_meandrina_HIv1___Sc0000038	2025163	2025948	786	1070	206	0.01588785046728972	-	UAGGAGCUGAAUAACUCAGAAUUGAGC	183	2	1045	3	1	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2048099-2048527	Cluster_6557	Pocillopora_meandrina_HIv1___Sc0000038	2048099	2048527	429	110	18	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	83	0	108	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2053173-2053797	Cluster_6558	Pocillopora_meandrina_HIv1___Sc0000038	2053173	2053797	625	321	120	0.367601246105919	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	48	10	243	0	9	19	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2054249-2054677	Cluster_6559	Pocillopora_meandrina_HIv1___Sc0000038	2054249	2054677	429	142	17	0.04929577464788732	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	67	0	139	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2128900-2129794	Cluster_6560	Pocillopora_meandrina_HIv1___Sc0000038	2128900	2129794	895	421	162	0.3491686460807601	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	59	6	323	7	2	17	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2129978-2130405	Cluster_6561	Pocillopora_meandrina_HIv1___Sc0000038	2129978	2130405	428	148	21	0.02702702702702703	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	60	0	146	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2153366-2153794	Cluster_6562	Pocillopora_meandrina_HIv1___Sc0000038	2153366	2153794	429	111	23	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	69	0	109	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2158209-2158833	Cluster_6563	Pocillopora_meandrina_HIv1___Sc0000038	2158209	2158833	625	362	128	0.35082872928176795	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	71	11	284	2	6	14	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2159285-2159713	Cluster_6564	Pocillopora_meandrina_HIv1___Sc0000038	2159285	2159713	429	143	16	0.027972027972027972	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	67	1	141	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2184108-2184535	Cluster_6565	Pocillopora_meandrina_HIv1___Sc0000038	2184108	2184535	428	270	103	0.937037037037037	+	UGAUUAAGAACGAUAAACUGGAACGUG	52	2	263	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2184776-2186379	Cluster_6566	Pocillopora_meandrina_HIv1___Sc0000038	2184776	2186379	1604	2661	786	0.813228109733183	+	UGAGUCUUGGAUUGAAGUACGACAUCACGUG	157	16	2394	6	10	70	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2277716-2278610	Cluster_6567	Pocillopora_meandrina_HIv1___Sc0000038	2277716	2278610	895	1714	624	0.5892648774795799	.	AUUUAUAUCAAGGAAGGCGGUGUU	89	98	1141	29	48	126	272	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2303627-2304055	Cluster_6568	Pocillopora_meandrina_HIv1___Sc0000038	2303627	2304055	429	106	21	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	68	0	105	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2308701-2309325	Cluster_6569	Pocillopora_meandrina_HIv1___Sc0000038	2308701	2309325	625	357	131	0.3445378151260504	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	62	6	281	6	4	18	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2309778-2310205	Cluster_6570	Pocillopora_meandrina_HIv1___Sc0000038	2309778	2310205	428	153	22	0.032679738562091505	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGU	61	1	150	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2329849-2330260	Cluster_6571	Pocillopora_meandrina_HIv1___Sc0000038	2329849	2330260	412	122	71	0.9836065573770492	+	UAUAUCACUGGAAAGCUUAUGAACUAUA	7	2	108	1	6	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2330327-2332875	Cluster_6572	Pocillopora_meandrina_HIv1___Sc0000038	2330327	2332875	2549	6794	2291	0.8591404180158964	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	131	111	5893	132	73	347	238	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2335417-2337240	Cluster_6573	Pocillopora_meandrina_HIv1___Sc0000038	2335417	2337240	1824	33315	3436	0.9291610385712141	+	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2270	433	31156	100	197	455	974	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2344734-2345161	Cluster_6574	Pocillopora_meandrina_HIv1___Sc0000038	2344734	2345161	428	189	96	0.9206349206349206	+	UGACGUCACGAUCUUUGCGCGCUACCAUU	22	3	176	0	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2352207-2352634	Cluster_6575	Pocillopora_meandrina_HIv1___Sc0000038	2352207	2352634	428	122	42	0.8770491803278688	+	ACGACUAUUACGGUCAGCUGAUUACUGGA	26	0	112	0	0	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2549411-2549853	Cluster_6576	Pocillopora_meandrina_HIv1___Sc0000038	2549411	2549853	443	835	79	0.1844311377245509	-	UUUCAAACUAAGGAAGGAGAAAGGGAUA	350	4	732	8	10	7	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2558329-2558754	Cluster_6577	Pocillopora_meandrina_HIv1___Sc0000038	2558329	2558754	426	119	58	0.07563025210084033	-	UCCAAUCAAAGUGCGUUGUGAUCGUGUCU	9	2	114	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2694494-2695197	Cluster_6578	Pocillopora_meandrina_HIv1___Sc0000038	2694494	2695197	704	269	145	0.9479553903345725	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	20	1	259	2	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2696424-2696854	Cluster_6579	Pocillopora_meandrina_HIv1___Sc0000038	2696424	2696854	431	266	146	0.8157894736842105	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	19	4	241	0	0	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:44068-44495	Cluster_6580	Pocillopora_meandrina_HIv1___Sc0000039	44068	44495	428	89	23	0.0	-	GACUGAAGCACGAGCAUCAUUCACUGUGGC	31	5	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:58776-59316	Cluster_6581	Pocillopora_meandrina_HIv1___Sc0000039	58776	59316	541	3697	574	0.0	-	CAGUCCAUAUCUAGUACCUAUA	605	349	2158	289	708	65	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:85340-85766	Cluster_6582	Pocillopora_meandrina_HIv1___Sc0000039	85340	85766	427	97	27	1.0	+	GCGACACUUUGAUCCUUGAUGAUCUGG	37	0	95	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:324852-325278	Cluster_6583	Pocillopora_meandrina_HIv1___Sc0000039	324852	325278	427	167	49	0.04790419161676647	-	UGGGUACAGACGGUAGGUUGAUGAUCU	35	2	154	2	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:326234-326787	Cluster_6584	Pocillopora_meandrina_HIv1___Sc0000039	326234	326787	554	308	104	0.11363636363636363	-	UGAGAUAGUUCUUCUGAUGUUUAUG	32	12	276	4	4	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:478396-478855	Cluster_6585	Pocillopora_meandrina_HIv1___Sc0000039	478396	478855	460	1325	207	0.2188679245283019	.	UUGUAACAACUUCCACUUGUGUGUCUGUG	263	26	1098	6	16	124	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:478922-479395	Cluster_6586	Pocillopora_meandrina_HIv1___Sc0000039	478922	479395	474	580	170	0.0603448275862069	-	UGAGAUAGUUCUUCUGAUGUUUAUGAUA	70	3	550	5	2	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:561562-562243	Cluster_6587	Pocillopora_meandrina_HIv1___Sc0000039	561562	562243	682	627	340	0.8708133971291866	+	UAGUUUCUUGUUCAAUGUGUUUAGAUGG	26	15	544	2	17	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:562253-563756	Cluster_6588	Pocillopora_meandrina_HIv1___Sc0000039	562253	563756	1504	87078	3224	0.007636831346608788	-	UGAUGAACUAUCUGGUGAAUCUUCUGGU	19711	605	84459	189	397	634	794	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:564482-564985	Cluster_6589	Pocillopora_meandrina_HIv1___Sc0000039	564482	564985	504	519	215	0.9402697495183044	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	64	6	486	5	1	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565000-565536	Cluster_6590	Pocillopora_meandrina_HIv1___Sc0000039	565000	565536	537	476	216	0.9180672268907563	+	UGAACUUCUCGGCUCCAAACACUAUGG	54	3	436	4	2	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565544-565971	Cluster_6591	Pocillopora_meandrina_HIv1___Sc0000039	565544	565971	428	371	181	0.8787061994609164	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	48	2	349	0	0	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565978-567972	Cluster_6592	Pocillopora_meandrina_HIv1___Sc0000039	565978	567972	1995	7753	1830	0.9315103830775184	+	UAAACACACGAUUUCUAGGUAACGAACAG	1167	116	7249	64	47	94	183	N	N	hsa-miR-4286;bta-miR-4286
Pocillopora_meandrina_HIv1___Sc0000039:1069808-1071863	Cluster_6593	Pocillopora_meandrina_HIv1___Sc0000039	1069808	1071863	2056	5631	1303	0.02912448943349316	-	UAUUCUGGAUACUGUUUAUAUUUAAAUGAC	275	21	5291	37	29	62	191	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1079123-1079540	Cluster_6594	Pocillopora_meandrina_HIv1___Sc0000039	1079123	1079540	418	124	66	0.31451612903225806	.	UGACUUGGAUUUGAAUUCU	13	35	65	13	9	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1084366-1084788	Cluster_6595	Pocillopora_meandrina_HIv1___Sc0000039	1084366	1084788	423	131	77	0.5419847328244275	.	UUGGAACGUAUUCAAGAAAGGGC	20	2	72	1	1	34	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1115633-1116054	Cluster_6596	Pocillopora_meandrina_HIv1___Sc0000039	1115633	1116054	422	205	99	0.926829268292683	+	AGUUGACAUAUUGACUGGUACAAACAAGGG	17	18	120	10	10	15	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1431207-1431924	Cluster_6597	Pocillopora_meandrina_HIv1___Sc0000039	1431207	1431924	718	2667	356	1.0	+	UGGCUGUGAUGAACUUAC	298	1656	451	390	96	38	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1582816-1583244	Cluster_6598	Pocillopora_meandrina_HIv1___Sc0000039	1582816	1583244	429	95	8	0.9578947368421052	+	UGGAUUAUCAUUUUUUGUUAGUGUUGGUG	64	1	93	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1662139-1662566	Cluster_6599	Pocillopora_meandrina_HIv1___Sc0000039	1662139	1662566	428	107	44	0.0	-	UGGUGAAGGAACUAAGUUACGCUUGUAUG	26	4	96	2	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1812903-1813330	Cluster_6600	Pocillopora_meandrina_HIv1___Sc0000039	1812903	1813330	428	221	46	0.751131221719457	.	UGGGUCUACUUCGAAUUCAUCGUUGUU	77	0	211	2	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2015662-2016196	Cluster_6601	Pocillopora_meandrina_HIv1___Sc0000039	2015662	2016196	535	688	260	0.0	-	UGACUAACCAGGAGAUGAUAUUU	91	74	356	13	24	163	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2019639-2020189	Cluster_6602	Pocillopora_meandrina_HIv1___Sc0000039	2019639	2020189	551	3674	699	0.00027218290691344586	-	CUUGACUAACCAGGAGAUGACAUUU	555	254	2480	77	265	369	229	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2075617-2076041	Cluster_6603	Pocillopora_meandrina_HIv1___Sc0000039	2075617	2076041	425	263	186	1.0	+	AUCUGGAUGAGACGUAUGCGAGUGCUCA	7	75	110	18	25	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2076937-2077481	Cluster_6604	Pocillopora_meandrina_HIv1___Sc0000039	2076937	2077481	545	4123	643	1.0	+	CCUGGGCUCCUAUGACAUUU	530	1336	1566	187	216	146	672	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2187027-2187479	Cluster_6605	Pocillopora_meandrina_HIv1___Sc0000039	2187027	2187479	453	441	83	0.9977324263038548	+	UCUGUUAAGAAAUACCACAAGGA	117	31	19	15	52	198	126	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2282094-2282550	Cluster_6606	Pocillopora_meandrina_HIv1___Sc0000039	2282094	2282550	457	2702	302	0.008512213175425611	-	UUCGAUCCUAAAUUCUCUUCAUGCUUCUG	487	38	2318	30	33	207	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2285405-2285833	Cluster_6607	Pocillopora_meandrina_HIv1___Sc0000039	2285405	2285833	429	111	44	0.0	-	AGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	27	0	107	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2337808-2338367	Cluster_6608	Pocillopora_meandrina_HIv1___Sc0000039	2337808	2338367	560	628	143	0.12898089171974522	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	187	12	495	7	37	70	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2383393-2383821	Cluster_6609	Pocillopora_meandrina_HIv1___Sc0000039	2383393	2383821	429	1604	137	0.024314214463840397	-	UAUGUUUUGAUCGCUUGAGAGUUUUGUGU	607	9	1567	3	10	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2398032-2398673	Cluster_6610	Pocillopora_meandrina_HIv1___Sc0000039	2398032	2398673	642	1161	271	0.4401378122308355	.	UAUGUUUUGAUCGCUAGAGAGUUUUGUGU	126	41	991	40	37	18	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2419810-2420247	Cluster_6611	Pocillopora_meandrina_HIv1___Sc0000039	2419810	2420247	438	1970	236	0.008121827411167513	-	UGGUAGUGGUUUUUUGGAUCCUGAUUGGU	227	30	1885	12	12	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2434444-2434872	Cluster_6612	Pocillopora_meandrina_HIv1___Sc0000039	2434444	2434872	429	275	73	0.02909090909090909	-	UUCGAUCCUAAAUUCUCUUCAUGCUUCUG	68	16	208	3	5	34	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2437887-2438315	Cluster_6613	Pocillopora_meandrina_HIv1___Sc0000039	2437887	2438315	429	126	48	0.0	-	AGUAGUGGUUUUUUGGAUCCUGAUUGGUG	20	2	121	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2460547-2460963	Cluster_6614	Pocillopora_meandrina_HIv1___Sc0000039	2460547	2460963	417	110	65	0.00909090909090909	-	AAUGAAAUGUUUAAACGAAAAUAGUAGAAU	10	3	103	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2462944-2463371	Cluster_6615	Pocillopora_meandrina_HIv1___Sc0000039	2462944	2463371	428	164	67	0.3353658536585366	.	GGCAGUGGUUAUUUGGAUCCUGAUUGGUGU	18	12	139	1	1	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2491389-2491817	Cluster_6616	Pocillopora_meandrina_HIv1___Sc0000039	2491389	2491817	429	444	112	0.07882882882882883	-	UUCGAUCCUAAAUUCUCUUCAUG	84	7	199	19	32	144	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2492123-2492547	Cluster_6617	Pocillopora_meandrina_HIv1___Sc0000039	2492123	2492547	425	146	72	0.0136986301369863	-	UGUAAAUUGUUAAAAUGUAGGGAAUCUCA	10	4	137	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2494721-2495151	Cluster_6618	Pocillopora_meandrina_HIv1___Sc0000039	2494721	2495151	431	728	148	0.0013736263736263737	-	AGCAGUGGUUUUCUGGAUCCUGAUUGGUG	148	27	678	10	5	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:241239-241665	Cluster_6619	Pocillopora_meandrina_HIv1___Sc0000040	241239	241665	427	167	68	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	21	1	159	0	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:294499-295072	Cluster_6620	Pocillopora_meandrina_HIv1___Sc0000040	294499	295072	574	3410	229	0.00997067448680352	-	AAGAUGUCGAGCGAUUUCGGAACGGGUU	1159	16	3205	4	5	33	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:302281-302701	Cluster_6621	Pocillopora_meandrina_HIv1___Sc0000040	302281	302701	421	92	31	1.0	+	CUUGAAUCGUUUGGACUGCGCCA	25	5	2	10	31	35	9	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:320124-320708	Cluster_6622	Pocillopora_meandrina_HIv1___Sc0000040	320124	320708	585	1492	272	0.9731903485254692	+	UGAACCGUGCCGAUCUGCUGCCCUUUGA	306	4	1464	1	3	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:321042-321471	Cluster_6623	Pocillopora_meandrina_HIv1___Sc0000040	321042	321471	430	298	59	0.9832214765100671	+	UCCGAUUUAAAAGAUUCUUUGUUUGU	64	2	287	0	2	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:520422-520849	Cluster_6624	Pocillopora_meandrina_HIv1___Sc0000040	520422	520849	428	86	15	0.011627906976744186	-	GUGUAGAUCAGCCGACUUCAACAUGUUU	67	0	80	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:563526-564122	Cluster_6625	Pocillopora_meandrina_HIv1___Sc0000040	563526	564122	597	5689	474	0.0024608894357532078	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	893	13	5626	4	2	18	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:732452-732880	Cluster_6626	Pocillopora_meandrina_HIv1___Sc0000040	732452	732880	429	83	22	0.03614457831325301	-	GACUAACAGAAGGAACUUUUAAACAACGUC	34	5	77	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:786458-786886	Cluster_6627	Pocillopora_meandrina_HIv1___Sc0000040	786458	786886	429	409	106	0.1882640586797066	-	UUGUAUUUGCUGAUCUAUUUGACAUCCUU	115	18	365	5	7	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:909113-909543	Cluster_6628	Pocillopora_meandrina_HIv1___Sc0000040	909113	909543	431	834	104	0.9304556354916067	+	UGCGAUUUCGUUCCUCGUCCUUGAUGAUG	257	0	821	0	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:936689-937118	Cluster_6629	Pocillopora_meandrina_HIv1___Sc0000040	936689	937118	430	214	75	0.009345794392523364	-	UCAGUCUCUGCAAUUCUCUGCUUUAGC	22	0	207	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:956194-956783	Cluster_6630	Pocillopora_meandrina_HIv1___Sc0000040	956194	956783	590	255	186	0.26666666666666666	.	UUAACGUCUCCUACCCCAAACCCUGCAGG	5	110	74	32	12	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:957810-958239	Cluster_6631	Pocillopora_meandrina_HIv1___Sc0000040	957810	958239	430	182	73	0.01098901098901099	-	UGCGAACUCGACUGCCGCCACGUGUGUA	25	0	181	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1037091-1037596	Cluster_6632	Pocillopora_meandrina_HIv1___Sc0000040	1037091	1037596	506	743	133	0.029609690444145357	-	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	178	3	721	2	4	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1102506-1102935	Cluster_6633	Pocillopora_meandrina_HIv1___Sc0000040	1102506	1102935	430	270	112	0.007407407407407408	-	UCAGUCUCUGCAAUUCUCUGCUUUAGCAGC	20	7	251	1	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1137367-1138124	Cluster_6634	Pocillopora_meandrina_HIv1___Sc0000040	1137367	1138124	758	277	106	0.8231046931407943	+	AUUGGUUGUAAGAGGGUUCCUGGU	13	5	220	7	2	5	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1139158-1139587	Cluster_6635	Pocillopora_meandrina_HIv1___Sc0000040	1139158	1139587	430	272	84	0.8786764705882353	+	AUGGAGAGCAAAAGACUGGACGAUUAGGA	29	4	239	0	2	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1156822-1157770	Cluster_6636	Pocillopora_meandrina_HIv1___Sc0000040	1156822	1157770	949	459	185	0.2766884531590414	.	UGUAUUCUGCUACUGGUUCUCCCGAGC	40	5	433	0	4	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1158929-1159356	Cluster_6637	Pocillopora_meandrina_HIv1___Sc0000040	1158929	1159356	428	158	38	0.012658227848101266	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	39	0	156	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1159389-1159954	Cluster_6638	Pocillopora_meandrina_HIv1___Sc0000040	1159389	1159954	566	1186	303	0.04047217537942664	-	UAUAUCUUCUUCGGACGCCCACGGCGCG	279	1	1143	1	1	14	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1189637-1190377	Cluster_6639	Pocillopora_meandrina_HIv1___Sc0000040	1189637	1190377	741	528	188	0.6856060606060606	.	GUGUAUACGAUCAGAACGGAAAUGAAUGU	125	10	464	3	9	7	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1191425-1191854	Cluster_6640	Pocillopora_meandrina_HIv1___Sc0000040	1191425	1191854	430	253	75	0.9169960474308301	+	AUGGAGAGCAAAAGACUGGACGAUUAGGA	31	3	213	2	6	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1210222-1211396	Cluster_6641	Pocillopora_meandrina_HIv1___Sc0000040	1210222	1211396	1175	890	359	0.9213483146067416	+	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	149	11	811	3	10	19	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1211609-1212113	Cluster_6642	Pocillopora_meandrina_HIv1___Sc0000040	1211609	1212113	505	534	211	0.9250936329588015	+	UAAUUCCAUCUUGCGCUGAUAGCUCGU	53	3	508	5	3	0	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1212129-1212555	Cluster_6643	Pocillopora_meandrina_HIv1___Sc0000040	1212129	1212555	427	214	97	0.8878504672897196	+	UGAACUUCUCGGCUCCAAACACUAUGG	69	1	203	0	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1212565-1213100	Cluster_6644	Pocillopora_meandrina_HIv1___Sc0000040	1212565	1213100	536	484	231	0.8491735537190083	+	UUUGUCGUGAUCUUUCACUGCUUCUUGC	57	3	444	4	3	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1213107-1215104	Cluster_6645	Pocillopora_meandrina_HIv1___Sc0000040	1213107	1215104	1998	4330	1475	0.8972286374133949	+	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	399	34	4043	20	47	61	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1221387-1221814	Cluster_6646	Pocillopora_meandrina_HIv1___Sc0000040	1221387	1221814	428	275	67	0.8872727272727273	+	CAGUUCAGUAUUUUAGGAGUCGAUCCCA	61	4	199	0	8	6	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1222588-1223017	Cluster_6647	Pocillopora_meandrina_HIv1___Sc0000040	1222588	1223017	430	818	103	0.9743276283618582	+	UGUGCUCAUACCUUAGCUGUGGCUGAAAUG	202	6	807	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1223568-1223997	Cluster_6648	Pocillopora_meandrina_HIv1___Sc0000040	1223568	1223997	430	272	77	0.9595588235294118	+	GGAGAGCAAAAGACUGGACGAUUAGGAAA	31	3	234	0	3	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1315909-1316345	Cluster_6649	Pocillopora_meandrina_HIv1___Sc0000040	1315909	1316345	437	248	91	0.03225806451612903	-	UAGAAAACAUUUUCAGUCUGCAAUUCUCUGC	38	5	235	0	2	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1339765-1341067	Cluster_6650	Pocillopora_meandrina_HIv1___Sc0000040	1339765	1341067	1303	10125	766	0.011358024691358024	-	UGAAGACAAGUGAUUCGCAAUCGAGGGG	906	474	9052	9	26	247	317	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1459335-1460463	Cluster_6651	Pocillopora_meandrina_HIv1___Sc0000040	1459335	1460463	1129	4668	736	0.24335904027420738	.	GUGUGAAACAUGUGGCCUCAGGCAGAAAGU	762	84	3599	15	24	482	464	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1491678-1492232	Cluster_6652	Pocillopora_meandrina_HIv1___Sc0000040	1491678	1492232	555	474	148	0.33755274261603374	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	62	5	418	11	7	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1738924-1739371	Cluster_6653	Pocillopora_meandrina_HIv1___Sc0000040	1738924	1739371	448	4162	61	0.0557424315233061	-	AUACUGAUAAUUGUGGUGACCAGACGAAUG	1447	3	3957	38	5	40	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1782051-1782472	Cluster_6654	Pocillopora_meandrina_HIv1___Sc0000040	1782051	1782472	422	156	70	0.8974358974358975	+	UGAAGGUAACGUUUCAUCCCGACUGAGA	26	9	138	2	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1866697-1867124	Cluster_6655	Pocillopora_meandrina_HIv1___Sc0000040	1866697	1867124	428	160	41	0.9125	+	UGCGAUUACAGAGGUGCGUUGGAACUCA	94	3	154	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1873852-1874282	Cluster_6656	Pocillopora_meandrina_HIv1___Sc0000040	1873852	1874282	431	234	86	0.9358974358974359	+	UUCUGCUAGGUUUGAAGUAGCUUUCUAAAGC	101	1	228	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1895511-1896019	Cluster_6657	Pocillopora_meandrina_HIv1___Sc0000040	1895511	1896019	509	231	90	0.06926406926406926	-	UGUACCAUCUGACCUUGCCAAAAUUCGA	22	5	216	5	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1928526-1928955	Cluster_6658	Pocillopora_meandrina_HIv1___Sc0000040	1928526	1928955	430	250	53	0.004	-	UGAAUGCCGGUAUAGCAAGCUCAGCUCUGU	49	0	244	4	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1934651-1935065	Cluster_6659	Pocillopora_meandrina_HIv1___Sc0000040	1934651	1935065	415	184	87	0.16847826086956522	-	UUUAAAGGGGAAGACAAUACAUCUGUA	16	1	167	0	0	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1966896-1968380	Cluster_6660	Pocillopora_meandrina_HIv1___Sc0000040	1966896	1968380	1485	2943	1048	0.19605844376486578	-	UAGAAGGAUUUGAAAAUGUCAGGCAUG	183	44	2695	18	13	38	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1968942-1969362	Cluster_6661	Pocillopora_meandrina_HIv1___Sc0000040	1968942	1969362	421	162	100	0.8703703703703703	+	UACUUGACUCUAGGAUACACAAGUUCUGG	19	2	150	0	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1969489-1970721	Cluster_6662	Pocillopora_meandrina_HIv1___Sc0000040	1969489	1970721	1233	3108	1062	0.6821106821106822	.	AGGUGUAGAAUGUAAAAAGCAGCU	144	25	2675	29	24	68	287	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2227580-2228008	Cluster_6663	Pocillopora_meandrina_HIv1___Sc0000040	2227580	2228008	429	1051	47	1.0	+	UCGAAGAUCUUUCUCUACUGU	487	7	419	492	68	41	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2234514-2234936	Cluster_6664	Pocillopora_meandrina_HIv1___Sc0000040	2234514	2234936	423	238	91	0.9369747899159664	+	UGAAAGGCUGUGACCGAGGUCA	28	95	9	76	54	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2282624-2283051	Cluster_6665	Pocillopora_meandrina_HIv1___Sc0000040	2282624	2283051	428	252	32	0.9920634920634921	+	UUCUUUACGUGCUCAACUUCUUGAACUU	86	0	238	0	0	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2323975-2324437	Cluster_6666	Pocillopora_meandrina_HIv1___Sc0000040	2323975	2324437	463	715	95	0.965034965034965	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	449	2	685	13	9	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2425460-2426225	Cluster_6667	Pocillopora_meandrina_HIv1___Sc0000040	2425460	2426225	766	3699	399	0.4552581778859151	.	UUGUCUGUAAACAGUGCAAUACUAGCUUUGC	596	12	3491	14	15	121	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:179304-180091	Cluster_6668	Pocillopora_meandrina_HIv1___Sc0000041	179304	180091	788	550	163	0.03090909090909091	-	UUGGGUACUGGUGCACUGG	116	135	389	1	9	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:251235-251700	Cluster_6669	Pocillopora_meandrina_HIv1___Sc0000041	251235	251700	466	337	80	0.8071216617210683	+	UACUUUCUCAGUCGUAGUAACUUUCUUUG	43	52	181	12	57	3	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:396145-396575	Cluster_6670	Pocillopora_meandrina_HIv1___Sc0000041	396145	396575	431	2795	34	0.0007155635062611807	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	2314	0	2793	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:433194-433603	Cluster_6671	Pocillopora_meandrina_HIv1___Sc0000041	433194	433603	410	97	33	0.6597938144329897	.	UAUGAUAUCACUGUGGAGCGAGG	28	1	55	1	0	35	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:725433-725860	Cluster_6672	Pocillopora_meandrina_HIv1___Sc0000041	725433	725860	428	74	21	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	20	0	73	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1104897-1105322	Cluster_6673	Pocillopora_meandrina_HIv1___Sc0000041	1104897	1105322	426	230	114	0.5782608695652174	.	GUUGACGUGAACGGUGUUAGAUGCCGAGC	22	1	198	1	1	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1107410-1107837	Cluster_6674	Pocillopora_meandrina_HIv1___Sc0000041	1107410	1107837	428	159	39	0.006289308176100629	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	44	1	157	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1145307-1145724	Cluster_6675	Pocillopora_meandrina_HIv1___Sc0000041	1145307	1145724	418	107	4	1.0	+	AACCUGGUUGAUCCUGCA	99	107	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1287240-1287657	Cluster_6676	Pocillopora_meandrina_HIv1___Sc0000041	1287240	1287657	418	337	9	0.0	-	GAUGAGGCUCAUAAAAAU	276	337	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1434797-1435210	Cluster_6677	Pocillopora_meandrina_HIv1___Sc0000041	1434797	1435210	414	186	142	1.0	+	AGAGAUUGAUCUUUGCUGGAAA	7	43	65	18	34	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1438370-1439141	Cluster_6678	Pocillopora_meandrina_HIv1___Sc0000041	1438370	1439141	772	6857	1202	0.08954353215691993	-	UGGGUCUUUUUUUUACUUCGGAAGAAUU	779	178	6334	72	31	68	174	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1439158-1442538	Cluster_6679	Pocillopora_meandrina_HIv1___Sc0000041	1439158	1442538	3381	9735	2362	0.13097072419106318	-	AGCAGGAAAAAAAGAUGAUGAACUUGUU	443	174	8755	122	150	200	334	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1507467-1507896	Cluster_6680	Pocillopora_meandrina_HIv1___Sc0000041	1507467	1507896	430	173	28	0.0	-	UGUGCAUUGACUGUCAUUUCUAAAUAAACU	80	0	173	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1508695-1509914	Cluster_6681	Pocillopora_meandrina_HIv1___Sc0000041	1508695	1509914	1220	16443	2295	0.04159824849480022	-	UGGAAGAAUGUUACAGUGAACUGGUUGU	1614	96	15791	44	119	180	213	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1551017-1551434	Cluster_6682	Pocillopora_meandrina_HIv1___Sc0000041	1551017	1551434	418	95	5	0.0	-	CUUUGGUGGAGAUGGAUG	87	95	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1579105-1579671	Cluster_6683	Pocillopora_meandrina_HIv1___Sc0000041	1579105	1579671	567	2360	472	0.9161016949152543	+	UUAAACCGACUCACAGUCCGAUUCGAAU	329	21	2242	8	13	20	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1754604-1755022	Cluster_6684	Pocillopora_meandrina_HIv1___Sc0000041	1754604	1755022	419	69	16	0.014492753623188406	-	UGUAGAGAUCCAGGCCUGGUAG	24	16	10	10	26	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2102529-2103800	Cluster_6685	Pocillopora_meandrina_HIv1___Sc0000041	2102529	2103800	1272	1298	495	0.0724191063174114	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	93	12	1240	3	5	13	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2104670-2105097	Cluster_6686	Pocillopora_meandrina_HIv1___Sc0000041	2104670	2105097	428	158	58	0.10126582278481013	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	65	2	144	0	5	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2105181-2105607	Cluster_6687	Pocillopora_meandrina_HIv1___Sc0000041	2105181	2105607	427	322	129	0.08074534161490683	-	UCCAAUCACACACAGUUCUCCUGCGGC	79	0	301	2	3	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2105761-2106406	Cluster_6688	Pocillopora_meandrina_HIv1___Sc0000041	2105761	2106406	646	1725	681	0.16579710144927537	-	UCUUUCUGUUAAACAAUAAUUCCGC	66	20	1552	8	10	55	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2106455-2107043	Cluster_6689	Pocillopora_meandrina_HIv1___Sc0000041	2106455	2107043	589	754	239	0.3116710875331565	.	UAUAUCUCCCAGGGAGUCUCCUCUGUC	65	11	685	2	7	26	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:113049-114325	Cluster_6690	Pocillopora_meandrina_HIv1___Sc0000042	113049	114325	1277	1341	505	0.07531692766592095	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	99	13	1268	5	4	15	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:114555-114991	Cluster_6691	Pocillopora_meandrina_HIv1___Sc0000042	114555	114991	437	1298	306	0.054699537750385205	-	UGAUCUGUCGUGACUCUGAAUUAAGUUC	153	22	1212	6	7	24	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:115077-116467	Cluster_6692	Pocillopora_meandrina_HIv1___Sc0000042	115077	116467	1391	3018	823	0.17760106030483763	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	252	16	2626	20	45	70	241	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:116502-117332	Cluster_6693	Pocillopora_meandrina_HIv1___Sc0000042	116502	117332	831	943	429	0.08377518557794274	-	UCUUGACAUGGGAUGUAUUCCUUGAAUA	35	11	866	5	13	11	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:249250-249840	Cluster_6694	Pocillopora_meandrina_HIv1___Sc0000042	249250	249840	591	1917	341	0.9994783515910276	+	GGAUAGCUGACUUGUGCGAAUAUUA	289	153	1255	53	35	65	356	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:624742-625606	Cluster_6695	Pocillopora_meandrina_HIv1___Sc0000042	624742	625606	865	1465	399	0.8430034129692833	+	UGAUCUGGAAUUCCGAAUCUGGAAAAUGCA	191	6	1419	6	4	6	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:625815-626959	Cluster_6696	Pocillopora_meandrina_HIv1___Sc0000042	625815	626959	1145	1521	416	0.9250493096646942	+	UGUUAAUGUCUGUACGAGUCUCUCGUC	176	7	1450	4	22	13	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:627094-627506	Cluster_6697	Pocillopora_meandrina_HIv1___Sc0000042	627094	627506	413	232	139	0.8232758620689655	+	UGUGCACCGUUCUAUAACAUCUAGCUCGAU	16	1	198	3	5	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:627868-628442	Cluster_6698	Pocillopora_meandrina_HIv1___Sc0000042	627868	628442	575	859	255	0.819557625145518	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	121	8	803	2	3	18	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:637381-637807	Cluster_6699	Pocillopora_meandrina_HIv1___Sc0000042	637381	637807	427	80	9	1.0	+	UGAACUACUGCUCGUACUCUAGAUAUA	66	1	78	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1021394-1022283	Cluster_6700	Pocillopora_meandrina_HIv1___Sc0000042	1021394	1022283	890	1013	252	0.9516288252714709	+	AGGAUCUGCAUCACCUGGAUAAAUUUGC	157	14	915	6	7	31	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1270194-1270608	Cluster_6701	Pocillopora_meandrina_HIv1___Sc0000042	1270194	1270608	415	181	101	0.0055248618784530384	-	AUCGCUUGUGGUGCCCUCG	11	84	25	21	22	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1278999-1279424	Cluster_6702	Pocillopora_meandrina_HIv1___Sc0000042	1278999	1279424	426	101	27	0.9306930693069307	+	UCGUGAUAUUCUUUAGCCUUCUGAUAUU	39	1	99	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1347342-1347770	Cluster_6703	Pocillopora_meandrina_HIv1___Sc0000042	1347342	1347770	429	127	49	1.0	+	CAAUGUGCGACGGUUUAAACUUACAAGUUA	40	9	107	3	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1622587-1623139	Cluster_6704	Pocillopora_meandrina_HIv1___Sc0000042	1622587	1623139	553	251	76	0.9243027888446215	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	42	2	226	0	2	14	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1623492-1624091	Cluster_6705	Pocillopora_meandrina_HIv1___Sc0000042	1623492	1624091	600	1534	287	0.7953063885267275	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	493	12	1454	6	9	16	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1719575-1720002	Cluster_6706	Pocillopora_meandrina_HIv1___Sc0000042	1719575	1720002	428	125	29	1.0	+	UGAACUACUGCUCGUACUCUAGAUGACA	24	0	125	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1728030-1728459	Cluster_6707	Pocillopora_meandrina_HIv1___Sc0000042	1728030	1728459	430	432	105	0.8333333333333334	+	UGCGAUUACAGAGGUGCGUUGGAACUCU	133	15	401	5	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1781534-1781951	Cluster_6708	Pocillopora_meandrina_HIv1___Sc0000042	1781534	1781951	418	87	1	1.0	+	CUUCCAAGACUCCAGACA	87	87	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1908956-1910728	Cluster_6709	Pocillopora_meandrina_HIv1___Sc0000042	1908956	1910728	1773	9486	2387	0.9254691123761333	+	UGAUAGACUGCACGACGAUUUACGUCA	504	101	8599	58	91	285	352	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1910782-1911458	Cluster_6710	Pocillopora_meandrina_HIv1___Sc0000042	1910782	1911458	677	8138	551	0.9969279921356599	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2229	11	8013	7	42	33	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:45034-45460	Cluster_6711	Pocillopora_meandrina_HIv1___Sc0000043	45034	45460	427	177	102	0.9378531073446328	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	16	1	165	3	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:118478-119696	Cluster_6712	Pocillopora_meandrina_HIv1___Sc0000043	118478	119696	1219	6300	1291	0.25	.	UGAUCAACUGAGAGCAUUAAGUAUAACUGG	476	72	5659	50	65	210	244	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:142705-143357	Cluster_6713	Pocillopora_meandrina_HIv1___Sc0000043	142705	143357	653	1640	461	0.0006097560975609756	-	UUGACUGAUGCAGUCUUUAGUAAUCUGAUGG	240	186	1081	96	77	141	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:208491-208980	Cluster_6714	Pocillopora_meandrina_HIv1___Sc0000043	208491	208980	490	1134	215	0.003527336860670194	-	AGUGAAUGAUGAAAUGUGUAUU	140	467	241	138	224	35	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:219904-220394	Cluster_6715	Pocillopora_meandrina_HIv1___Sc0000043	219904	220394	491	650	162	0.0	-	AGUGAGUGAUGAAAUGUGU	41	246	217	68	74	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:383154-383582	Cluster_6716	Pocillopora_meandrina_HIv1___Sc0000043	383154	383582	429	347	121	0.0	-	GAUCUCUCGUCCUUAUUCUGAUGA	32	12	244	4	17	10	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:439737-440714	Cluster_6717	Pocillopora_meandrina_HIv1___Sc0000043	439737	440714	978	3627	708	0.23435346015991176	.	UGUGAUCGCAUAUAGCUACUUCUGU	415	107	3303	27	24	82	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:555393-555820	Cluster_6718	Pocillopora_meandrina_HIv1___Sc0000043	555393	555820	428	86	11	0.011627906976744186	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	32	0	85	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:617191-617605	Cluster_6719	Pocillopora_meandrina_HIv1___Sc0000043	617191	617605	415	111	5	1.0	+	CUUUCCGAGGUCGCA	81	111	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:657103-657521	Cluster_6720	Pocillopora_meandrina_HIv1___Sc0000043	657103	657521	419	488	31	1.0	+	GUGGUCGAGGUGAGGGGA	117	488	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:664135-664558	Cluster_6721	Pocillopora_meandrina_HIv1___Sc0000043	664135	664558	424	244	24	0.9959016393442623	+	UGGCCUGAAAAAAAAAAAAAAAA	34	44	53	36	20	43	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:682728-683210	Cluster_6722	Pocillopora_meandrina_HIv1___Sc0000043	682728	683210	483	238	133	0.0	-	GAAAGGAGAGUGAGAAGCCUGUUA	34	46	94	14	14	24	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:870037-870714	Cluster_6723	Pocillopora_meandrina_HIv1___Sc0000043	870037	870714	678	8175	547	0.0037920489296636084	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2189	11	8031	7	52	37	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:870768-871322	Cluster_6724	Pocillopora_meandrina_HIv1___Sc0000043	870768	871322	555	2677	542	0.040717220769518114	-	UAUUGUAUCUGAUGUUUUCAAUGGUGUA	395	27	2503	8	19	48	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:933766-934194	Cluster_6725	Pocillopora_meandrina_HIv1___Sc0000043	933766	934194	429	194	45	0.9484536082474226	+	CUCACUAGCAAUGUAUCAGAUCGUUGACU	54	5	148	5	20	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1057389-1057816	Cluster_6726	Pocillopora_meandrina_HIv1___Sc0000043	1057389	1057816	428	164	80	0.17682926829268292	-	UGUUUGAUCCAAUUCAGGAUACUUUGGC	16	0	144	2	1	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1058179-1058642	Cluster_6727	Pocillopora_meandrina_HIv1___Sc0000043	1058179	1058642	464	713	172	0.056100981767180924	-	UGAACGAUCUUCUCACCAUCUCUUCUGGAA	170	6	688	2	0	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1070665-1071201	Cluster_6728	Pocillopora_meandrina_HIv1___Sc0000043	1070665	1071201	537	5254	703	0.0	-	AUCGGUGUUCAAUGAACUGACAGUU	773	392	3510	138	340	324	550	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1193305-1193726	Cluster_6729	Pocillopora_meandrina_HIv1___Sc0000043	1193305	1193726	422	196	126	0.9948979591836735	+	GGCGACUGCAAAUAUGAAGGU	6	80	48	29	17	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1196585-1197090	Cluster_6730	Pocillopora_meandrina_HIv1___Sc0000043	1196585	1197090	506	698	361	1.0	+	UCGAGACAGACACUUUGGCU	24	213	240	53	78	44	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1197261-1197923	Cluster_6731	Pocillopora_meandrina_HIv1___Sc0000043	1197261	1197923	663	524	360	1.0	+	AUGAACUGAAGCCGUUGCUGGAACGACCACU	9	127	233	36	34	39	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1198022-1198576	Cluster_6732	Pocillopora_meandrina_HIv1___Sc0000043	1198022	1198576	555	276	191	1.0	+	GUCUUAGCGAGGACUGCAGCGU	6	84	86	34	32	20	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1198788-1199302	Cluster_6733	Pocillopora_meandrina_HIv1___Sc0000043	1198788	1199302	515	564	304	1.0	+	UGUGAUCUUUUCGGAACCGAGGAACA	30	102	273	26	37	46	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1199682-1200151	Cluster_6734	Pocillopora_meandrina_HIv1___Sc0000043	1199682	1200151	470	405	249	1.0	+	GAGACUGAGGAACAACGUACCCA	11	80	147	47	42	48	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1200357-1200876	Cluster_6735	Pocillopora_meandrina_HIv1___Sc0000043	1200357	1200876	520	1120	325	1.0	+	UCAGUCGUUUGGUGGAAACCUUA	243	118	475	74	72	319	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1201226-1201716	Cluster_6736	Pocillopora_meandrina_HIv1___Sc0000043	1201226	1201716	491	464	299	1.0	+	GGCAAUGGCUGCUGGAAGCUCU	14	102	178	38	67	28	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1201775-1202262	Cluster_6737	Pocillopora_meandrina_HIv1___Sc0000043	1201775	1202262	488	505	303	1.0	+	GUUGUCCAAGCAGACGAGACUCU	13	123	192	36	55	61	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1202372-1202797	Cluster_6738	Pocillopora_meandrina_HIv1___Sc0000043	1202372	1202797	426	258	177	0.9922480620155039	+	CAGCUGUGUAUGCUCUACGAAGA	6	53	133	17	21	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1202918-1203421	Cluster_6739	Pocillopora_meandrina_HIv1___Sc0000043	1202918	1203421	504	675	435	1.0	+	AGCGGUGUUCAACUUGGUAGUCA	15	141	272	50	63	76	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1204969-1205448	Cluster_6740	Pocillopora_meandrina_HIv1___Sc0000043	1204969	1205448	480	368	274	1.0	+	GACCGAAACGAAGCUUAGACAAGA	6	91	146	31	36	31	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1205695-1206724	Cluster_6741	Pocillopora_meandrina_HIv1___Sc0000043	1205695	1206724	1030	814	523	1.0	+	CCCGAUCAAGUCACUCUUAGUGGAAAAUUG	9	243	330	63	62	50	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1207095-1207525	Cluster_6742	Pocillopora_meandrina_HIv1___Sc0000043	1207095	1207525	431	209	133	1.0	+	AUCUACAGGAACACAGAGCUGGACGGAUUUG	11	57	102	16	8	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1207805-1208251	Cluster_6743	Pocillopora_meandrina_HIv1___Sc0000043	1207805	1208251	447	299	219	1.0	+	AACUGGACUCUGAAGGCA	6	77	113	28	33	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1208427-1209617	Cluster_6744	Pocillopora_meandrina_HIv1___Sc0000043	1208427	1209617	1191	1145	789	0.9991266375545852	+	CGCCUCGCGACAGUUGUGUAUAUU	7	268	492	116	97	82	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1210088-1210640	Cluster_6745	Pocillopora_meandrina_HIv1___Sc0000043	1210088	1210640	553	680	403	0.9970588235294118	+	AAAAAAUUGAGGCUGACGU	11	165	291	59	46	60	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1210927-1211411	Cluster_6746	Pocillopora_meandrina_HIv1___Sc0000043	1210927	1211411	485	391	232	1.0	+	AAUGAUGUGCUACAAACUUCUGAAAAAGU	23	54	210	25	39	34	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1211639-1212558	Cluster_6747	Pocillopora_meandrina_HIv1___Sc0000043	1211639	1212558	920	777	520	0.9961389961389961	+	GUUUGCACCGUGGAGCAGGACA	8	192	283	90	83	64	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1212786-1213213	Cluster_6748	Pocillopora_meandrina_HIv1___Sc0000043	1212786	1213213	428	330	177	0.996969696969697	+	UCAAGUAGAGAUCGUGCGUGGAAGCA	15	106	108	49	20	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1213344-1213862	Cluster_6749	Pocillopora_meandrina_HIv1___Sc0000043	1213344	1213862	519	456	303	1.0	+	GGCAUGUGUGGUGACUGUAAUGCAGAACA	10	102	175	40	55	38	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1213865-1214748	Cluster_6750	Pocillopora_meandrina_HIv1___Sc0000043	1213865	1214748	884	1662	866	1.0	+	UGCGCUCUUCGUAACUUACAUUUCUGUUCA	57	310	837	91	154	132	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1520955-1521381	Cluster_6751	Pocillopora_meandrina_HIv1___Sc0000043	1520955	1521381	427	172	96	0.1744186046511628	-	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	12	3	145	2	2	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1688244-1690420	Cluster_6752	Pocillopora_meandrina_HIv1___Sc0000043	1688244	1690420	2177	2843	906	0.972564192754133	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	654	14	2722	8	10	39	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1691428-1692467	Cluster_6753	Pocillopora_meandrina_HIv1___Sc0000043	1691428	1692467	1040	3554	798	0.9805852560495216	+	UUGGAAUUGGUAGAACUGACUUUACCA	435	31	3443	12	13	26	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1692607-1694210	Cluster_6754	Pocillopora_meandrina_HIv1___Sc0000043	1692607	1694210	1604	1706	763	0.8675263774912075	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	89	11	1538	8	16	38	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1834833-1835477	Cluster_6755	Pocillopora_meandrina_HIv1___Sc0000043	1834833	1835477	645	516	241	0.25775193798449614	.	UUCUUCACUUGUUGACUCUAAAGAUUCAUA	26	14	450	1	7	22	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:124779-125205	Cluster_6756	Pocillopora_meandrina_HIv1___Sc0000044	124779	125205	427	307	76	0.8566775244299675	+	GCGACAACUUUCGGCUACAAAUCGUGC	132	23	254	7	11	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:364704-365124	Cluster_6757	Pocillopora_meandrina_HIv1___Sc0000044	364704	365124	421	106	58	0.7641509433962265	.	AAAGGAUAGAACUGACCGGUCAGG	16	1	65	5	8	4	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:409810-410234	Cluster_6758	Pocillopora_meandrina_HIv1___Sc0000044	409810	410234	425	40146	159	0.0	-	UUCCAAAUCUGUGAUGUUAUUGA	33115	126	78	69	1058	37607	1208	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:420597-421918	Cluster_6759	Pocillopora_meandrina_HIv1___Sc0000044	420597	421918	1322	1460	495	0.9198630136986301	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	113	13	1370	6	7	37	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:422138-422803	Cluster_6760	Pocillopora_meandrina_HIv1___Sc0000044	422138	422803	666	615	307	0.6325203252032521	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	31	7	550	2	3	15	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:422944-423594	Cluster_6761	Pocillopora_meandrina_HIv1___Sc0000044	422944	423594	651	595	274	0.8302521008403362	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	106	6	551	6	1	10	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:557949-558378	Cluster_6762	Pocillopora_meandrina_HIv1___Sc0000044	557949	558378	430	109	21	1.0	+	UAAGAGCAGAAUCUCAUUGAUCUAUUUUAGA	60	4	98	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:569299-570194	Cluster_6763	Pocillopora_meandrina_HIv1___Sc0000044	569299	570194	896	1284	322	0.37772585669781933	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	201	8	1207	9	3	12	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:587677-588131	Cluster_6764	Pocillopora_meandrina_HIv1___Sc0000044	587677	588131	455	6169	164	0.9998378991732858	+	UUACUCUUGACGCUUAUAUCACU	1751	135	57	252	1729	3531	465	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:883695-884124	Cluster_6765	Pocillopora_meandrina_HIv1___Sc0000044	883695	884124	430	296	56	0.9831081081081081	+	CGAUCCAACAAGAACAGUAUGUGCUGACU	83	1	288	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:930296-930705	Cluster_6766	Pocillopora_meandrina_HIv1___Sc0000044	930296	930705	410	109	39	0.0	-	UUGGUUUGUGUACGCUUGGAGUU	30	0	59	0	8	36	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1020355-1020763	Cluster_6767	Pocillopora_meandrina_HIv1___Sc0000044	1020355	1020763	409	247	187	0.004048582995951417	-	CUAGGCAUUUUUAUUGACUGAAA	5	58	111	18	17	22	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1087018-1087438	Cluster_6768	Pocillopora_meandrina_HIv1___Sc0000044	1087018	1087438	421	257	24	0.9922178988326849	+	UAAUCUGAAGGUCGUGAGU	58	228	0	29	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1108933-1109360	Cluster_6769	Pocillopora_meandrina_HIv1___Sc0000044	1108933	1109360	428	199	70	0.01507537688442211	-	UAAUCCCAUCGAUUCUGCAGCCGCCAUU	36	4	185	1	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1109942-1110423	Cluster_6770	Pocillopora_meandrina_HIv1___Sc0000044	1109942	1110423	482	10968	485	0.00337345003646973	-	UAAUCAACUGUGGCUGUGCGAUGUUCUGC	3244	79	10717	18	21	70	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1155525-1155945	Cluster_6771	Pocillopora_meandrina_HIv1___Sc0000044	1155525	1155945	421	956	31	0.997907949790795	+	CGGCCUGAAAAAAAAAAA	609	878	17	27	33	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1192085-1192513	Cluster_6772	Pocillopora_meandrina_HIv1___Sc0000044	1192085	1192513	429	89	25	0.0	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	41	1	88	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1219142-1219560	Cluster_6773	Pocillopora_meandrina_HIv1___Sc0000044	1219142	1219560	419	89	47	0.0	-	UAUUGAAAAUGAUUUUGGAAUGGAUCCA	15	1	87	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1474411-1474829	Cluster_6774	Pocillopora_meandrina_HIv1___Sc0000044	1474411	1474829	419	351	31	0.0	-	AACUUUUGACGGUGGGUCU	100	348	1	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1500329-1500759	Cluster_6775	Pocillopora_meandrina_HIv1___Sc0000044	1500329	1500759	431	271	69	0.01107011070110701	-	UGUUACGUCGUGGUAGUCUUCCGAUGAGGC	43	1	264	0	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1605931-1606361	Cluster_6776	Pocillopora_meandrina_HIv1___Sc0000044	1605931	1606361	431	337	149	0.06824925816023739	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	17	4	324	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1606377-1606804	Cluster_6777	Pocillopora_meandrina_HIv1___Sc0000044	1606377	1606804	428	254	140	0.11023622047244094	-	UACUGAUAGUGAAACUGCUCCUUGAACC	18	2	240	0	2	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1609460-1609889	Cluster_6778	Pocillopora_meandrina_HIv1___Sc0000044	1609460	1609889	430	87	21	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	0	85	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1619074-1620250	Cluster_6779	Pocillopora_meandrina_HIv1___Sc0000044	1619074	1620250	1177	1739	665	0.05980448533640023	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	100	27	1620	10	9	23	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1620354-1621168	Cluster_6780	Pocillopora_meandrina_HIv1___Sc0000044	1620354	1621168	815	577	338	0.045060658578856154	-	UGCAAGAAGUACUGGGUUCACUGAGACC	19	3	549	1	2	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1621245-1621668	Cluster_6781	Pocillopora_meandrina_HIv1___Sc0000044	1621245	1621668	424	130	70	0.08461538461538462	-	UGUAAUCAUACGCUUAGCCUCAGUGAACGCU	11	0	122	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1621743-1622169	Cluster_6782	Pocillopora_meandrina_HIv1___Sc0000044	1621743	1622169	427	298	134	0.06040268456375839	-	UAGGUAAUGGCACAAACUGAGAGGCGU	35	1	283	0	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1640462-1640962	Cluster_6783	Pocillopora_meandrina_HIv1___Sc0000044	1640462	1640962	501	201	97	0.009950248756218905	-	UGUACGUUGACUCUACUGACUUGAGACCUC	18	0	199	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:182705-183615	Cluster_6784	Pocillopora_meandrina_HIv1___Sc0000045	182705	183615	911	268	102	0.0708955223880597	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	20	0	255	2	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:184675-185342	Cluster_6785	Pocillopora_meandrina_HIv1___Sc0000045	184675	185342	668	628	242	0.1035031847133758	-	UUGGUAUCAUCUCCGAGGCUGUUGUAUC	95	7	578	5	7	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:234132-234611	Cluster_6786	Pocillopora_meandrina_HIv1___Sc0000045	234132	234611	480	2156	224	0.9948979591836735	+	CAACAAAUCAAACUUAGAGGCUCUUCAGC	317	5	2104	11	4	6	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:284932-285360	Cluster_6787	Pocillopora_meandrina_HIv1___Sc0000045	284932	285360	429	7692	132	0.0005200208008320333	-	AUUGCAAGCAAACGGCUAGGAGUCUUCU	3358	16	7606	7	6	5	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:294530-294959	Cluster_6788	Pocillopora_meandrina_HIv1___Sc0000045	294530	294959	430	469	122	0.9808102345415778	+	UGUAGAAUCAAUCUGUUACUAAGACACC	113	2	447	13	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:295037-295522	Cluster_6789	Pocillopora_meandrina_HIv1___Sc0000045	295037	295522	486	271	141	0.8376383763837638	+	GAGAAACUCAAGGCUGUUGGCUUG	11	5	226	6	2	4	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:295749-296151	Cluster_6790	Pocillopora_meandrina_HIv1___Sc0000045	295749	296151	403	191	125	0.8272251308900523	+	UGGACUCUAUAAUGUCUUUAAACAUGGU	9	1	169	0	3	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:296726-297264	Cluster_6791	Pocillopora_meandrina_HIv1___Sc0000045	296726	297264	539	544	200	0.78125	.	UGUAUUCACUUGGGUUAACUCUUCCACA	99	1	521	1	2	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:351507-351935	Cluster_6792	Pocillopora_meandrina_HIv1___Sc0000045	351507	351935	429	102	29	0.0784313725490196	-	UGUAUCUUCAGAGGAUUUCGGAUCGCUCA	64	1	98	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:791112-791534	Cluster_6793	Pocillopora_meandrina_HIv1___Sc0000045	791112	791534	423	120	30	0.0	-	UAACAUGAAGAUAUGAAAUUCCUA	42	4	9	1	0	54	52	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:792311-792733	Cluster_6794	Pocillopora_meandrina_HIv1___Sc0000045	792311	792733	423	253	22	0.0	-	UAACAUGAAGACGUUGAAUUUCU	108	29	7	11	59	108	39	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:826503-826931	Cluster_6795	Pocillopora_meandrina_HIv1___Sc0000045	826503	826931	429	98	27	0.01020408163265306	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	0	97	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:219132-220448	Cluster_6796	Pocillopora_meandrina_HIv1___Sc0000046	219132	220448	1317	12535	1144	0.9954527323494217	+	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUGG	4201	89	12144	121	41	54	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:222590-223018	Cluster_6797	Pocillopora_meandrina_HIv1___Sc0000046	222590	223018	429	238	80	1.0	+	UGAACUGUCUGCUGCUGAUGAUGAUGAGC	89	10	214	1	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:223387-223816	Cluster_6798	Pocillopora_meandrina_HIv1___Sc0000046	223387	223816	430	228	102	1.0	+	UUGGAUAAUGCUGACAACUUGGGCAAUACC	40	5	213	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:231177-231605	Cluster_6799	Pocillopora_meandrina_HIv1___Sc0000046	231177	231605	429	249	90	1.0	+	UAAGUUCACUGAAAAGGUCUAGACGUUCAAG	31	5	240	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:235152-235752	Cluster_6800	Pocillopora_meandrina_HIv1___Sc0000046	235152	235752	601	591	200	0.9864636209813875	+	UGUAUGCUGUUUGUUGGACGUUGCUGAUA	94	14	544	9	8	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:241309-241886	Cluster_6801	Pocillopora_meandrina_HIv1___Sc0000046	241309	241886	578	328	140	0.9969512195121951	+	UGAAGACGGUGAUAAACGAAUUUAUUCUGU	64	7	315	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:242202-242741	Cluster_6802	Pocillopora_meandrina_HIv1___Sc0000046	242202	242741	540	782	256	1.0	+	UGAAACUAGCCUCUGGAUGUAAAGGAC	35	4	721	3	23	10	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:244759-246061	Cluster_6803	Pocillopora_meandrina_HIv1___Sc0000046	244759	246061	1303	2468	421	0.8950567260940032	+	UCCACAUGGAUUCUUAACCCAGCAAUAGACC	319	33	2329	14	15	27	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:246101-247174	Cluster_6804	Pocillopora_meandrina_HIv1___Sc0000046	246101	247174	1074	10054	1271	0.9802068828327034	+	UAGGAGCUGAAUAACUCAGAAUUGAGC	1352	56	9633	27	46	95	197	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:248155-248584	Cluster_6805	Pocillopora_meandrina_HIv1___Sc0000046	248155	248584	430	261	84	1.0	+	UGCCUCAAUUAUUUGUUUCCACUGUUGAUC	121	0	253	0	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:254125-254646	Cluster_6806	Pocillopora_meandrina_HIv1___Sc0000046	254125	254646	522	3348	313	0.994026284348865	+	UGCACUCUGCCAAUUUCUCGUUCAAUUCG	1161	28	3209	11	17	52	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:254949-255374	Cluster_6807	Pocillopora_meandrina_HIv1___Sc0000046	254949	255374	426	141	59	1.0	+	UUUUUAAAAUAAGACUCUCGGAAAUGCGUU	18	0	138	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:255660-256064	Cluster_6808	Pocillopora_meandrina_HIv1___Sc0000046	255660	256064	405	188	100	1.0	+	UACUUCCCACUUUUGGACCAUUAAUGAGA	19	2	174	1	7	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:256240-256670	Cluster_6809	Pocillopora_meandrina_HIv1___Sc0000046	256240	256670	431	458	184	1.0	+	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	57	6	432	2	9	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:256894-257312	Cluster_6810	Pocillopora_meandrina_HIv1___Sc0000046	256894	257312	419	217	118	1.0	+	UAAGUUACACUGAUUUAACUCCUUUACAAG	13	1	213	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:257445-257872	Cluster_6811	Pocillopora_meandrina_HIv1___Sc0000046	257445	257872	428	337	116	1.0	+	UGGGUGUAGUGCUGAAUACUGCAGCAUU	91	1	328	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:261258-262127	Cluster_6812	Pocillopora_meandrina_HIv1___Sc0000046	261258	262127	870	6760	641	0.9705621301775148	+	UGACCUAAAAUGUAGUGAACAGACUUUU	989	118	6036	45	94	146	321	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:263488-263914	Cluster_6813	Pocillopora_meandrina_HIv1___Sc0000046	263488	263914	427	211	84	0.995260663507109	+	UAUUGACUUUGGUCCUUGUAUGAGGGAGA	31	3	205	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:265288-265716	Cluster_6814	Pocillopora_meandrina_HIv1___Sc0000046	265288	265716	429	399	124	0.9974937343358395	+	UUCAUUCUCUAAACAUCUUUCUCUGUUU	83	3	393	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:266491-266920	Cluster_6815	Pocillopora_meandrina_HIv1___Sc0000046	266491	266920	430	223	77	1.0	+	UGUGUAGAAGUUGUCCACAUAGAGAAGAUG	85	4	217	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:269962-270503	Cluster_6816	Pocillopora_meandrina_HIv1___Sc0000046	269962	270503	542	399	142	0.9974937343358395	+	UGAUGUUGCUGUUCUGGCUUUUCCAAGU	30	3	383	2	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:277575-278003	Cluster_6817	Pocillopora_meandrina_HIv1___Sc0000046	277575	278003	429	302	119	0.9966887417218543	+	UGGUUAUCUGCAAUUUGUGUCAAAAUAUGU	35	2	294	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:278266-279149	Cluster_6818	Pocillopora_meandrina_HIv1___Sc0000046	278266	279149	884	1047	338	0.9914040114613181	+	UUGGCAUUAAUUUUUGAACGGUUGGAACACC	79	14	999	1	11	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:280694-281698	Cluster_6819	Pocillopora_meandrina_HIv1___Sc0000046	280694	281698	1005	581	186	0.8967297762478486	+	UGCUUGACUUAUAGUCACUGUACAACUGACU	70	13	532	2	5	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:285383-285790	Cluster_6820	Pocillopora_meandrina_HIv1___Sc0000046	285383	285790	408	112	61	0.29464285714285715	.	UGAUCUUCUUGAAAUCGUUUGAUUCCAG	9	1	108	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:290983-291412	Cluster_6821	Pocillopora_meandrina_HIv1___Sc0000046	290983	291412	430	134	49	0.9850746268656716	+	UCUGCCUCAUUUAAGAACUCUAGCCCAAGG	28	0	125	2	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:293250-293669	Cluster_6822	Pocillopora_meandrina_HIv1___Sc0000046	293250	293669	420	176	92	0.9943181818181818	+	UCUAACCAUCUGAAUGAGAGCCAUCGCAUC	16	0	172	3	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:307283-309048	Cluster_6823	Pocillopora_meandrina_HIv1___Sc0000046	307283	309048	1766	14704	1566	0.795429815016322	.	UAUAGAUGUAGCUCUUGGUAUGUGCCA	1791	84	12791	66	189	644	930	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:309717-310136	Cluster_6824	Pocillopora_meandrina_HIv1___Sc0000046	309717	310136	420	166	93	0.9096385542168675	+	UAGCCUUCUCUGAAAAACUUGUAAAUCUUC	12	1	153	3	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:311089-311636	Cluster_6825	Pocillopora_meandrina_HIv1___Sc0000046	311089	311636	548	1385	258	0.9942238267148015	+	UGUGAAUUUACUGACCAUCUCGACAUUGGUA	176	11	1341	2	13	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:319687-320119	Cluster_6826	Pocillopora_meandrina_HIv1___Sc0000046	319687	320119	433	304	120	0.930921052631579	+	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	28	5	286	0	3	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:320338-320850	Cluster_6827	Pocillopora_meandrina_HIv1___Sc0000046	320338	320850	513	191	94	0.9581151832460733	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	25	0	180	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:321062-322200	Cluster_6828	Pocillopora_meandrina_HIv1___Sc0000046	321062	322200	1139	4621	1127	0.9515256438000432	+	UUAGUAACUCAGCUCUCAUUGUGCCAUC	200	48	4433	7	28	38	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:330775-331195	Cluster_6829	Pocillopora_meandrina_HIv1___Sc0000046	330775	331195	421	139	51	0.9928057553956835	+	UCUUGUAACCGUGAUAGCUCAGGCUGACU	21	2	137	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:331848-332271	Cluster_6830	Pocillopora_meandrina_HIv1___Sc0000046	331848	332271	424	102	50	1.0	+	UCAUUUUCUGAAGGAGCUUAGAAACCAGA	8	3	97	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:332705-333133	Cluster_6831	Pocillopora_meandrina_HIv1___Sc0000046	332705	333133	429	335	126	0.9970149253731343	+	UGUGAAAUAGUGUCUGAUACAAGAAGGUC	30	6	301	8	10	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:336248-337540	Cluster_6832	Pocillopora_meandrina_HIv1___Sc0000046	336248	337540	1293	13831	1321	0.9738269105632276	+	UAGAGUGGAUGCAUUCUGAUCUUUACCA	1639	65	13430	30	26	71	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:344410-344810	Cluster_6833	Pocillopora_meandrina_HIv1___Sc0000046	344410	344810	401	237	142	0.0970464135021097	-	UCGAUGACAAGUUCUUGUUAGGAUCUACAGC	13	7	215	2	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:344906-345396	Cluster_6834	Pocillopora_meandrina_HIv1___Sc0000046	344906	345396	491	319	168	0.10344827586206896	-	UAAUUUGCACUCUUCAUAGAUCCCUAAA	17	9	286	2	8	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:345518-345940	Cluster_6835	Pocillopora_meandrina_HIv1___Sc0000046	345518	345940	423	154	93	0.16233766233766234	-	UGAGUGUGAAUUUGUGCCGAGUACCAAGCC	13	3	143	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:353960-354387	Cluster_6836	Pocillopora_meandrina_HIv1___Sc0000046	353960	354387	428	216	31	1.0	+	UAAAGCUUGGGGUAAUAGAUUUCUGUCU	53	0	215	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:363046-363474	Cluster_6837	Pocillopora_meandrina_HIv1___Sc0000046	363046	363474	429	202	42	0.9603960396039604	+	UGGAAAACCAUCUUGAACCGCUUAAAGCA	79	0	192	0	0	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:402469-402899	Cluster_6838	Pocillopora_meandrina_HIv1___Sc0000046	402469	402899	431	570	77	0.9912280701754386	+	UGCAUACUGUUUGCUCUUGAAUUUCAUCA	277	0	566	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:403060-403650	Cluster_6839	Pocillopora_meandrina_HIv1___Sc0000046	403060	403650	591	291	130	0.9003436426116839	+	UAGGAACGCUUUGAAUUUCUCUGAGACA	15	5	264	1	0	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:404017-405352	Cluster_6840	Pocillopora_meandrina_HIv1___Sc0000046	404017	405352	1336	7765	1082	0.9401159047005795	+	UGAAGAACUUGAUCGAUUACAUGUUGAUA	3409	23	7508	16	28	63	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:405422-406276	Cluster_6841	Pocillopora_meandrina_HIv1___Sc0000046	405422	406276	855	512	236	0.849609375	+	UAAGACCGUAUGGACCUGUUUUCUGACUGGC	35	8	457	7	4	12	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:410127-410555	Cluster_6842	Pocillopora_meandrina_HIv1___Sc0000046	410127	410555	429	142	54	1.0	+	UGAAUUCUUGAAUACUGCUUUGGGUCAGCA	29	1	140	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:411343-411770	Cluster_6843	Pocillopora_meandrina_HIv1___Sc0000046	411343	411770	428	317	69	0.9968454258675079	+	UUAUUUCCAUUUCUGCAUGAGUUUGAGC	200	1	315	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:419043-419455	Cluster_6844	Pocillopora_meandrina_HIv1___Sc0000046	419043	419455	413	91	31	0.9560439560439561	+	UCUGUCUAGUGUUCCACCUUCUGUACAUU	29	4	83	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:426261-426690	Cluster_6845	Pocillopora_meandrina_HIv1___Sc0000046	426261	426690	430	388	88	1.0	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	187	5	352	3	0	3	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:439425-439855	Cluster_6846	Pocillopora_meandrina_HIv1___Sc0000046	439425	439855	431	385	79	1.0	+	CAACAAUCGUGAAAUUGCUCGUGAAUAUGGC	159	3	375	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:440926-441351	Cluster_6847	Pocillopora_meandrina_HIv1___Sc0000046	440926	441351	426	114	30	0.9912280701754386	+	UGUUACUCUCAGAUCUUGGCAGACGCCU	23	2	112	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:453172-453578	Cluster_6848	Pocillopora_meandrina_HIv1___Sc0000046	453172	453578	407	194	109	0.9948453608247423	+	UGUGACUGAGGCUUGUUUUGAUAACUC	9	2	179	1	0	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:459437-459856	Cluster_6849	Pocillopora_meandrina_HIv1___Sc0000046	459437	459856	420	115	44	1.0	+	UUGGCACGUGUCCAUCUUUGAUUUCUGA	21	0	113	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:464181-464610	Cluster_6850	Pocillopora_meandrina_HIv1___Sc0000046	464181	464610	430	199	62	0.2964824120603015	.	UAUCUGAGCAUUUCAUAACAAUGUAACUUC	56	0	185	0	1	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:527203-527729	Cluster_6851	Pocillopora_meandrina_HIv1___Sc0000046	527203	527729	527	1026	124	0.14132553606237816	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	216	2	1014	0	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:657920-658503	Cluster_6852	Pocillopora_meandrina_HIv1___Sc0000046	657920	658503	584	815	254	0.0196319018404908	-	UGACUGACUGUGCUUGUGUACGAUACA	76	1	794	2	1	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:658899-659487	Cluster_6853	Pocillopora_meandrina_HIv1___Sc0000046	658899	659487	589	231	110	0.021645021645021644	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	5	222	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000049:27861-28457	Cluster_6854	Pocillopora_meandrina_HIv1___Sc0000049	27861	28457	597	5674	495	0.99682763482552	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	835	11	5616	4	3	9	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:92873-93301	Cluster_6855	Pocillopora_meandrina_HIv1___Sc0000051	92873	93301	429	100	11	1.0	+	UGUUUACGGGUGACUGAAGAAGAACUGGU	75	0	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:130033-130458	Cluster_6856	Pocillopora_meandrina_HIv1___Sc0000051	130033	130458	426	129	62	0.7364341085271318	.	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	14	2	122	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:159395-159819	Cluster_6857	Pocillopora_meandrina_HIv1___Sc0000051	159395	159819	425	130	57	0.9230769230769231	+	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	16	2	125	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:3818-4246	Cluster_6858	Pocillopora_meandrina_HIv1___Sc0000055	3818	4246	429	373	43	0.002680965147453083	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	285	0	370	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:22288-22718	Cluster_6859	Pocillopora_meandrina_HIv1___Sc0000055	22288	22718	431	392	116	0.9260204081632653	+	UGACUGUUGACCACCAAGAUUUGGAUC	60	2	329	2	22	21	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:55728-56159	Cluster_6860	Pocillopora_meandrina_HIv1___Sc0000055	55728	56159	432	2029	45	0.9748644652538196	+	UAAAAUCCGAAAAAUUCGAAAUGGAAGGCUG	1668	4	1975	3	0	14	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:111446-111876	Cluster_6861	Pocillopora_meandrina_HIv1___Sc0000055	111446	111876	431	289	121	0.10726643598615918	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	54	7	260	4	2	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000057:62935-63402	Cluster_6862	Pocillopora_meandrina_HIv1___Sc0000057	62935	63402	468	315	119	0.8222222222222222	+	AUAUAUCCUAUACGCAUCUGAUAACAUUUUC	38	27	239	8	14	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:1689-2114	Cluster_6863	Pocillopora_meandrina_HIv1___Sc0000061	1689	2114	426	313	133	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	20	70	141	11	14	48	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:2320-2731	Cluster_6864	Pocillopora_meandrina_HIv1___Sc0000061	2320	2731	412	204	127	0.9950980392156863	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	44	99	11	18	18	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:3907-4329	Cluster_6865	Pocillopora_meandrina_HIv1___Sc0000061	3907	4329	423	124	72	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	11	26	49	4	12	21	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:11377-11803	Cluster_6866	Pocillopora_meandrina_HIv1___Sc0000061	11377	11803	427	474	158	0.002109704641350211	-	GGAAUACCCCGUGUUGUAGGCUU	39	112	194	15	24	78	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:12009-12419	Cluster_6867	Pocillopora_meandrina_HIv1___Sc0000061	12009	12419	411	205	130	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	45	102	10	21	13	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:13595-14021	Cluster_6868	Pocillopora_meandrina_HIv1___Sc0000061	13595	14021	427	418	147	0.0023923444976076554	-	GGAAUACCCCGUGUUGUAGGCUU	28	96	178	9	27	64	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:14227-14637	Cluster_6869	Pocillopora_meandrina_HIv1___Sc0000061	14227	14637	411	213	131	0.9953051643192489	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	48	104	10	20	12	19	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:14771-15173	Cluster_6870	Pocillopora_meandrina_HIv1___Sc0000061	14771	15173	403	130	74	1.0	+	CGUUCGCGCUCGUCCCCGC	18	53	33	10	14	7	13	N	N	nve-miR-9415
Pocillopora_meandrina_HIv1___Sc0000061:15813-16238	Cluster_6871	Pocillopora_meandrina_HIv1___Sc0000061	15813	16238	426	402	160	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	27	90	173	17	28	54	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:16436-16884	Cluster_6872	Pocillopora_meandrina_HIv1___Sc0000061	16436	16884	449	253	156	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	54	122	14	23	23	17	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:18031-18456	Cluster_6873	Pocillopora_meandrina_HIv1___Sc0000061	18031	18456	426	449	158	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	29	100	204	15	31	55	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:18663-19073	Cluster_6874	Pocillopora_meandrina_HIv1___Sc0000061	18663	19073	411	220	123	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	53	99	15	17	23	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:20249-20675	Cluster_6875	Pocillopora_meandrina_HIv1___Sc0000061	20249	20675	427	477	148	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	32	118	212	18	32	58	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:20881-21323	Cluster_6876	Pocillopora_meandrina_HIv1___Sc0000061	20881	21323	443	219	140	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	64	87	13	17	18	20	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:22467-22893	Cluster_6877	Pocillopora_meandrina_HIv1___Sc0000061	22467	22893	427	431	155	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	32	79	197	15	26	65	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:23099-23509	Cluster_6878	Pocillopora_meandrina_HIv1___Sc0000061	23099	23509	411	226	141	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	46	106	10	26	25	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:24685-25111	Cluster_6879	Pocillopora_meandrina_HIv1___Sc0000061	24685	25111	427	433	166	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	36	120	178	10	30	55	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:25317-25727	Cluster_6880	Pocillopora_meandrina_HIv1___Sc0000061	25317	25727	411	208	130	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	53	95	9	19	16	16	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:26903-27329	Cluster_6881	Pocillopora_meandrina_HIv1___Sc0000061	26903	27329	427	396	150	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	32	90	166	11	23	64	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:27535-27945	Cluster_6882	Pocillopora_meandrina_HIv1___Sc0000061	27535	27945	411	219	137	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	9	56	104	16	14	16	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:29121-29546	Cluster_6883	Pocillopora_meandrina_HIv1___Sc0000061	29121	29546	426	408	163	0.007352941176470588	-	UGGGAAUACCCCGUGUUGUAGGCUU	29	86	176	12	27	58	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:29746-30163	Cluster_6884	Pocillopora_meandrina_HIv1___Sc0000061	29746	30163	418	231	134	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	50	106	18	13	27	17	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:31339-31763	Cluster_6885	Pocillopora_meandrina_HIv1___Sc0000061	31339	31763	425	205	104	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	16	52	81	9	16	27	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:31971-32381	Cluster_6886	Pocillopora_meandrina_HIv1___Sc0000061	31971	32381	411	219	125	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	17	45	114	12	16	19	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:39387-39812	Cluster_6887	Pocillopora_meandrina_HIv1___Sc0000061	39387	39812	426	329	141	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	29	70	148	19	17	41	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:40023-40425	Cluster_6888	Pocillopora_meandrina_HIv1___Sc0000061	40023	40425	403	158	98	0.9936708860759493	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	28	79	14	14	12	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:41604-42029	Cluster_6889	Pocillopora_meandrina_HIv1___Sc0000061	41604	42029	426	382	142	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	26	92	167	10	27	42	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:42236-42646	Cluster_6890	Pocillopora_meandrina_HIv1___Sc0000061	42236	42646	411	206	126	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	17	41	104	13	14	21	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:43822-44247	Cluster_6891	Pocillopora_meandrina_HIv1___Sc0000061	43822	44247	426	298	123	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	22	72	131	13	18	38	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:44454-44864	Cluster_6892	Pocillopora_meandrina_HIv1___Sc0000061	44454	44864	411	205	116	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	40	95	10	18	23	19	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:46041-46464	Cluster_6893	Pocillopora_meandrina_HIv1___Sc0000061	46041	46464	424	160	96	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	10	35	72	4	11	19	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:46673-47083	Cluster_6894	Pocillopora_meandrina_HIv1___Sc0000061	46673	47083	411	176	111	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	30	83	8	13	24	18	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:54032-54457	Cluster_6895	Pocillopora_meandrina_HIv1___Sc0000061	54032	54457	426	454	169	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	25	108	189	19	29	57	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:54664-55074	Cluster_6896	Pocillopora_meandrina_HIv1___Sc0000061	54664	55074	411	183	117	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	45	86	8	10	16	18	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:56250-56675	Cluster_6897	Pocillopora_meandrina_HIv1___Sc0000061	56250	56675	426	396	166	0.0025252525252525255	-	UGGGAAUACCCCGUGUUGUAGGCUU	31	96	180	13	30	47	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:56885-57292	Cluster_6898	Pocillopora_meandrina_HIv1___Sc0000061	56885	57292	408	165	109	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	9	36	75	10	19	16	9	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:58468-58893	Cluster_6899	Pocillopora_meandrina_HIv1___Sc0000061	58468	58893	426	443	155	0.002257336343115124	-	UGGGAAUACCCCGUGUUGUAGGCUU	27	112	187	13	27	67	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:59100-59510	Cluster_6900	Pocillopora_meandrina_HIv1___Sc0000061	59100	59510	411	217	127	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	9	40	101	15	11	28	22	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:60686-61112	Cluster_6901	Pocillopora_meandrina_HIv1___Sc0000061	60686	61112	427	419	161	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	29	89	192	15	21	53	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:61309-61761	Cluster_6902	Pocillopora_meandrina_HIv1___Sc0000061	61309	61761	453	249	135	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	17	61	116	12	14	24	22	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:62904-63329	Cluster_6903	Pocillopora_meandrina_HIv1___Sc0000061	62904	63329	426	437	161	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	33	106	168	21	39	62	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:63536-63946	Cluster_6904	Pocillopora_meandrina_HIv1___Sc0000061	63536	63946	411	207	131	0.9903381642512077	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	44	101	9	20	20	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:65122-65547	Cluster_6905	Pocillopora_meandrina_HIv1___Sc0000061	65122	65547	426	400	165	0.0025	-	UGGGAAUACCCCGUGUUGUAGGCUU	30	100	162	10	25	55	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:65754-66190	Cluster_6906	Pocillopora_meandrina_HIv1___Sc0000061	65754	66190	437	216	117	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	54	98	13	22	17	12	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:67340-67762	Cluster_6907	Pocillopora_meandrina_HIv1___Sc0000061	67340	67762	423	156	82	0.00641025641025641	-	GGAAUACCCCGUGUUGUAGGCUU	19	42	57	8	9	28	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000066:51411-51838	Cluster_6908	Pocillopora_meandrina_HIv1___Sc0000066	51411	51838	428	156	65	0.967948717948718	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	44	3	147	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000067:40407-41365	Cluster_6909	Pocillopora_meandrina_HIv1___Sc0000067	40407	41365	959	1329	217	0.981941309255079	+	UUGAAACGUGUUGCUGAACGCUUGUUGU	361	8	1285	1	1	24	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000067:64340-64947	Cluster_6910	Pocillopora_meandrina_HIv1___Sc0000067	64340	64947	608	4535	332	0.0930540242557883	-	UCCGGUGUAAAAUAAAACAGAAGCAUU	1434	70	3742	372	36	45	270	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000069:14373-16111	Cluster_6911	Pocillopora_meandrina_HIv1___Sc0000069	14373	16111	1739	2677	1057	0.9574150168098617	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	92	21	2554	6	20	43	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:28306-29023	Cluster_6912	Pocillopora_meandrina_HIv1___Sc0000077	28306	29023	718	404	226	0.09158415841584158	-	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	24	9	362	3	2	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:31165-31696	Cluster_6913	Pocillopora_meandrina_HIv1___Sc0000077	31165	31696	532	595	237	0.011764705882352941	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	29	1	581	4	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:31816-32246	Cluster_6914	Pocillopora_meandrina_HIv1___Sc0000077	31816	32246	431	610	123	0.009836065573770493	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	141	0	600	4	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:609-1034	Cluster_6915	Pocillopora_meandrina_HIv1___Sc0000080	609	1034	426	205	119	0.01951219512195122	-	UUGUCUUGUUUCUGUUCUGACCCGAACA	9	1	200	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:11173-11595	Cluster_6916	Pocillopora_meandrina_HIv1___Sc0000080	11173	11595	423	130	45	0.5769230769230769	.	CAAGUUGUAAAUUAUGGGUCGUG	41	0	74	0	3	41	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:14588-15009	Cluster_6917	Pocillopora_meandrina_HIv1___Sc0000080	14588	15009	422	117	41	0.03418803418803419	-	UCAAAACCUUGUUGGCUGUAUUCUCUCAUC	38	2	110	0	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000081:33329-33757	Cluster_6918	Pocillopora_meandrina_HIv1___Sc0000081	33329	33757	429	247	69	0.0	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	42	0	245	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:19971-20587	Cluster_6919	Pocillopora_meandrina_HIv1___xfSc0000000	19971	20587	617	338	113	0.9023668639053254	+	UGUACUCUUUCUAUUUUCCUUCGUUCCUGGG	52	8	319	3	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:49337-49754	Cluster_6920	Pocillopora_meandrina_HIv1___xfSc0000000	49337	49754	418	121	58	0.8099173553719008	+	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	12	0	115	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:261113-261538	Cluster_6921	Pocillopora_meandrina_HIv1___xfSc0000000	261113	261538	426	151	68	0.9933774834437086	+	GUCUUUCUUAGUACUUUCUCUGUCUUAGUG	36	19	99	6	5	10	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:369300-369822	Cluster_6922	Pocillopora_meandrina_HIv1___xfSc0000000	369300	369822	523	1843	178	0.9945740640260445	+	UGUGUGUUUGGCUGGAGCAUCUGCGGCUA	204	20	1768	16	15	3	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:375429-375956	Cluster_6923	Pocillopora_meandrina_HIv1___xfSc0000000	375429	375956	528	781	187	0.05505761843790013	-	UUUGAUAUAAAGGUUGUGGAAAAACAGU	100	12	723	3	3	19	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:587017-587441	Cluster_6924	Pocillopora_meandrina_HIv1___xfSc0000000	587017	587441	425	134	73	0.9701492537313433	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	15	1	130	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:588528-588954	Cluster_6925	Pocillopora_meandrina_HIv1___xfSc0000000	588528	588954	427	134	82	0.8432835820895522	+	UGUAUUGAUUGAACUUGUCGGUUGACCACA	9	4	118	2	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:598004-598432	Cluster_6926	Pocillopora_meandrina_HIv1___xfSc0000000	598004	598432	429	161	38	0.006211180124223602	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	65	0	153	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:651583-652001	Cluster_6927	Pocillopora_meandrina_HIv1___xfSc0000000	651583	652001	419	122	8	0.01639344262295082	-	UUAUGUUUUGGCUUGUUUU	106	121	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:659750-660262	Cluster_6928	Pocillopora_meandrina_HIv1___xfSc0000000	659750	660262	513	406	137	0.9285714285714286	+	UAAGAUUCCAAGAUAUUUAAAACAAGUAAC	35	1	370	1	4	5	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:695933-696402	Cluster_6929	Pocillopora_meandrina_HIv1___xfSc0000000	695933	696402	470	392	177	0.8928571428571429	+	UCUGUACUAGAGCAAGAACAAGGUUUU	27	2	345	3	6	6	30	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:696415-696844	Cluster_6930	Pocillopora_meandrina_HIv1___xfSc0000000	696415	696844	430	284	135	0.9225352112676056	+	UGUUCUUGUAGUCUUUUAACAGCUUGUU	22	5	269	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:814453-815107	Cluster_6931	Pocillopora_meandrina_HIv1___xfSc0000000	814453	815107	655	600	284	0.17833333333333334	-	UGUGUCAGAUGCGUUUCAGAAAUGGUU	99	7	536	7	5	14	31	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:815243-815909	Cluster_6932	Pocillopora_meandrina_HIv1___xfSc0000000	815243	815909	667	639	320	0.40219092331768386	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	26	6	567	1	10	21	34	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:816129-816786	Cluster_6933	Pocillopora_meandrina_HIv1___xfSc0000000	816129	816786	658	1136	321	0.06778169014084508	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	95	7	1081	3	6	18	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:817024-817450	Cluster_6934	Pocillopora_meandrina_HIv1___xfSc0000000	817024	817450	427	232	129	0.1206896551724138	-	UGAGUCGAGGUUAUUCACAAUACGAGC	32	4	208	4	4	5	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1384894-1385321	Cluster_6935	Pocillopora_meandrina_HIv1___xfSc0000000	1384894	1385321	428	116	39	0.07758620689655173	-	UUAAACCGACUCACAGUCCGAUUCGAAU	31	0	107	1	0	6	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1437925-1438367	Cluster_6936	Pocillopora_meandrina_HIv1___xfSc0000000	1437925	1438367	443	401	214	0.8453865336658354	+	UACUCUUUCGAGUUUCGUGUUACUGUUGGG	22	10	367	2	6	6	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1596809-1597235	Cluster_6937	Pocillopora_meandrina_HIv1___xfSc0000000	1596809	1597235	427	101	26	0.7425742574257426	.	CUUCAUUCUGAUCUAUUGUUACAGUUACAAC	36	0	97	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:43913-44382	Cluster_6938	Pocillopora_meandrina_HIv1___xfSc0000001	43913	44382	470	5301	314	0.1414827391058291	-	UGAUCUGCGCAUAGGAAUUGCCCUGGAC	2035	12	5031	7	30	67	154	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:44951-45376	Cluster_6939	Pocillopora_meandrina_HIv1___xfSc0000001	44951	45376	426	222	59	0.8333333333333334	+	AUGUAGAGUGUCUUUAAGGUCAAUA	35	2	181	0	2	7	30	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:45557-45985	Cluster_6940	Pocillopora_meandrina_HIv1___xfSc0000001	45557	45985	429	183	38	0.8633879781420765	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	52	1	180	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:316338-317779	Cluster_6941	Pocillopora_meandrina_HIv1___xfSc0000001	316338	317779	1442	8031	1232	0.8972730668658947	+	UGUGAAACCCCGGUCUGCCAUAACCAUGUC	732	27	7701	27	39	98	139	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:422317-423402	Cluster_6942	Pocillopora_meandrina_HIv1___xfSc0000001	422317	423402	1086	654	169	0.7140672782874617	.	AUUGUUUGGAUGUGUCUGCAAAUGCAGUGC	49	49	518	4	6	26	51	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:433286-433793	Cluster_6943	Pocillopora_meandrina_HIv1___xfSc0000001	433286	433793	508	2353	288	0.9464513387165321	+	UGUUUCACACUUUACUACAUUCCCUGGU	635	41	2237	3	7	19	46	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:441368-441790	Cluster_6944	Pocillopora_meandrina_HIv1___xfSc0000001	441368	441790	423	103	48	0.05825242718446602	-	UACUCUCCUCUUGAGCUGCUCGGAUAUCAGC	30	3	91	1	0	6	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:611346-611769	Cluster_6945	Pocillopora_meandrina_HIv1___xfSc0000001	611346	611769	424	135	85	0.9777777777777777	+	UGAUCUUCGUACGGUGCGCUCGCAUGACUU	7	0	133	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:614071-614498	Cluster_6946	Pocillopora_meandrina_HIv1___xfSc0000001	614071	614498	428	86	31	0.9534883720930233	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	29	0	84	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:655361-655787	Cluster_6947	Pocillopora_meandrina_HIv1___xfSc0000001	655361	655787	427	151	59	0.4370860927152318	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	23	2	140	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1019322-1019730	Cluster_6948	Pocillopora_meandrina_HIv1___xfSc0000001	1019322	1019730	409	149	72	0.9932885906040269	+	UAAUAAACUCAAAAGAUUAUAACGCGGU	14	1	148	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1021545-1021972	Cluster_6949	Pocillopora_meandrina_HIv1___xfSc0000001	1021545	1021972	428	89	33	0.9438202247191011	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	0	86	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1062411-1062820	Cluster_6950	Pocillopora_meandrina_HIv1___xfSc0000001	1062411	1062820	410	111	41	0.3963963963963964	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	17	2	105	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1104049-1104466	Cluster_6951	Pocillopora_meandrina_HIv1___xfSc0000001	1104049	1104466	418	146	95	0.9931506849315068	+	UGAUCUUCGUACGGUGUGCUCGCAUGA	9	2	141	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1106692-1108688	Cluster_6952	Pocillopora_meandrina_HIv1___xfSc0000001	1106692	1108688	1997	7970	1548	0.9697616060225847	+	UACUCUUCUGUGCUGUAUUCCAUUUGC	1037	38	7649	18	38	80	147	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1108888-1109756	Cluster_6953	Pocillopora_meandrina_HIv1___xfSc0000001	1108888	1109756	869	689	329	0.9317851959361393	+	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	33	8	656	1	0	13	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1109761-1110708	Cluster_6954	Pocillopora_meandrina_HIv1___xfSc0000001	1109761	1110708	948	2250	742	0.9031111111111111	+	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	176	11	2118	7	15	25	74	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:168712-169762	Cluster_6955	Pocillopora_meandrina_HIv1___xfSc0000002	168712	169762	1051	1193	410	0.9354568315171836	+	UCCAGUCGAGUAGUGCUAAAUAAAAAUUGCU	75	9	1130	5	3	14	32	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:170062-170886	Cluster_6956	Pocillopora_meandrina_HIv1___xfSc0000002	170062	170886	825	805	272	0.9403726708074535	+	UGUGUCAGAACCCGGCUUGCAUAAGUGA	107	7	750	7	6	26	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:170920-171342	Cluster_6957	Pocillopora_meandrina_HIv1___xfSc0000002	170920	171342	423	238	139	0.6470588235294118	.	UAGACGAAGAAUCCAGUAAACUAACUGUGUU	20	2	208	5	2	4	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:171488-173001	Cluster_6958	Pocillopora_meandrina_HIv1___xfSc0000002	171488	173001	1514	3965	1117	0.8116015132408575	+	UCACUGAAGACUCGAGUACA	153	338	3351	63	25	33	155	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:178161-178586	Cluster_6959	Pocillopora_meandrina_HIv1___xfSc0000002	178161	178586	426	134	59	0.08208955223880597	-	UUAUAAGGAUCUCAAGGCGAAAAAAGGG	43	9	117	4	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:303947-304378	Cluster_6960	Pocillopora_meandrina_HIv1___xfSc0000002	303947	304378	432	335	120	0.0	-	UUCUGUAGCAGCCGAUGUCCUGGGAGAUG	33	1	303	7	5	3	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:344013-344439	Cluster_6961	Pocillopora_meandrina_HIv1___xfSc0000002	344013	344439	427	197	101	0.7969543147208121	.	UAUGACGUCUUCAAUUUACUUUAUUUGA	26	25	139	14	2	12	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:444416-444837	Cluster_6962	Pocillopora_meandrina_HIv1___xfSc0000002	444416	444837	422	195	123	0.1076923076923077	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	31	3	181	2	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:446677-447730	Cluster_6963	Pocillopora_meandrina_HIv1___xfSc0000002	446677	447730	1054	780	356	0.764102564102564	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	35	4	738	6	4	15	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:447990-448420	Cluster_6964	Pocillopora_meandrina_HIv1___xfSc0000002	447990	448420	431	607	214	0.9044481054365733	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	77	6	527	5	3	7	59	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:480370-480796	Cluster_6965	Pocillopora_meandrina_HIv1___xfSc0000002	480370	480796	427	278	131	0.0	-	UGCGUUCUGUCGGUGAUGUGAUUUUACCAC	52	3	267	1	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:481085-481485	Cluster_6966	Pocillopora_meandrina_HIv1___xfSc0000002	481085	481485	401	94	38	0.0	-	AGGACUACCAACAUCUUCUUUUCCCGGU	29	0	91	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:482097-482525	Cluster_6967	Pocillopora_meandrina_HIv1___xfSc0000002	482097	482525	429	246	135	0.0	-	UCGGUCUGGUCGCUCUGGAUGAUGACGC	19	0	236	1	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:482702-483129	Cluster_6968	Pocillopora_meandrina_HIv1___xfSc0000002	482702	483129	428	327	82	0.0	-	UGGAUUGUCUUCAGUUGGGACGUGAUGC	156	1	316	1	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:483467-484031	Cluster_6969	Pocillopora_meandrina_HIv1___xfSc0000002	483467	484031	565	5281	305	0.0	-	UCUGGUCAGGCUGCAAGCAUACAACACC	3265	15	5228	3	19	7	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:497091-497513	Cluster_6970	Pocillopora_meandrina_HIv1___xfSc0000002	497091	497513	423	138	68	0.9492753623188406	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	24	0	133	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:498601-499027	Cluster_6971	Pocillopora_meandrina_HIv1___xfSc0000002	498601	499027	427	149	83	0.87248322147651	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	14	0	136	1	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:500363-500771	Cluster_6972	Pocillopora_meandrina_HIv1___xfSc0000002	500363	500771	409	142	88	0.795774647887324	.	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	11	0	128	0	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:572736-573152	Cluster_6973	Pocillopora_meandrina_HIv1___xfSc0000002	572736	573152	417	72	8	1.0	+	GACUUGAAGCGGUUGGUU	51	72	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:573629-574054	Cluster_6974	Pocillopora_meandrina_HIv1___xfSc0000002	573629	574054	426	125	48	0.04	-	UAUAAAGAUGUUCAUCGGCCCAGUGGCGUGA	23	3	119	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:575312-575715	Cluster_6975	Pocillopora_meandrina_HIv1___xfSc0000002	575312	575715	404	141	77	0.09219858156028368	-	UACUGGAAUAAUAACUUUACGAUCAACA	20	2	134	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:575742-576151	Cluster_6976	Pocillopora_meandrina_HIv1___xfSc0000002	575742	576151	410	83	36	0.2891566265060241	.	UGAGAUCUUUUUAGCUUGAGUUUGUUGA	19	1	73	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:576219-576625	Cluster_6977	Pocillopora_meandrina_HIv1___xfSc0000002	576219	576625	407	112	68	0.17857142857142858	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	11	2	94	4	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:577718-578141	Cluster_6978	Pocillopora_meandrina_HIv1___xfSc0000002	577718	578141	424	125	57	0.04	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUA	15	0	120	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:652776-653204	Cluster_6979	Pocillopora_meandrina_HIv1___xfSc0000002	652776	653204	429	406	45	0.0049261083743842365	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	288	1	402	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:116593-117023	Cluster_6980	Pocillopora_meandrina_HIv1___xfSc0000003	116593	117023	431	92	32	0.9891304347826086	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	36	0	92	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:231720-232130	Cluster_6981	Pocillopora_meandrina_HIv1___xfSc0000003	231720	232130	411	198	119	1.0	+	UCUGUUCUGGUUCGGGGUAGAUUCCCUGGC	12	1	190	1	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:232473-232900	Cluster_6982	Pocillopora_meandrina_HIv1___xfSc0000003	232473	232900	428	415	124	1.0	+	UGGAUUGUCUUCAGUUGGGACGUGAUGC	158	2	402	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:233077-233728	Cluster_6983	Pocillopora_meandrina_HIv1___xfSc0000003	233077	233728	652	348	176	1.0	+	UCGGUCUGGUCGCUCUGGAUGAUGACGC	25	1	338	1	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:234000-234676	Cluster_6984	Pocillopora_meandrina_HIv1___xfSc0000003	234000	234676	677	693	318	1.0	+	UAAGACUACGUGAAUUGGAAUUUGAGGU	29	3	663	3	2	6	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:234871-235369	Cluster_6985	Pocillopora_meandrina_HIv1___xfSc0000003	234871	235369	499	721	245	1.0	+	UGCGUGUCCUUUUCUGCUGAGUUUGGAA	85	1	702	7	5	4	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:8030-8746	Cluster_6986	Pocillopora_meandrina_HIv1___xfSc0000004	8030	8746	717	355	183	0.07605633802816901	-	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	29	3	326	3	3	1	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:10888-11418	Cluster_6987	Pocillopora_meandrina_HIv1___xfSc0000004	10888	11418	531	543	208	0.009208103130755065	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	36	2	534	1	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:11539-11968	Cluster_6988	Pocillopora_meandrina_HIv1___xfSc0000004	11539	11968	430	595	130	0.008403361344537815	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	118	0	591	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:42435-42862	Cluster_6989	Pocillopora_meandrina_HIv1___xfSc0000004	42435	42862	428	531	71	0.9096045197740112	+	UUGGACAAAGCAUCACUAAACAAAGUUU	306	2	507	0	1	20	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:43641-44050	Cluster_6990	Pocillopora_meandrina_HIv1___xfSc0000004	43641	44050	410	70	10	0.7571428571428571	.	UAAGCUUUCGUCCAUGUUAUCACUU	33	1	68	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:96818-97227	Cluster_6991	Pocillopora_meandrina_HIv1___xfSc0000004	96818	97227	410	78	11	0.8589743589743589	+	UAAGCUUUCGUCCAUGUUAUCACUU	46	1	77	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:148429-148965	Cluster_6992	Pocillopora_meandrina_HIv1___xfSc0000004	148429	148965	537	629	119	0.014308426073131956	-	GAUAUUGUCAGACAAGAUGCCAAACUGAA	81	14	591	0	9	4	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:199831-200258	Cluster_6993	Pocillopora_meandrina_HIv1___xfSc0000004	199831	200258	428	88	20	0.9545454545454546	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	34	0	86	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:204461-204976	Cluster_6994	Pocillopora_meandrina_HIv1___xfSc0000004	204461	204976	516	686	68	0.7011661807580175	.	UUGGACAAAGCAUCACUAAACAAAGUUU	319	1	664	0	1	20	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:261818-262245	Cluster_6995	Pocillopora_meandrina_HIv1___xfSc0000004	261818	262245	428	456	58	0.9539473684210527	+	UUGGACAAAGCAUCACUAAACAAAGUUU	286	1	435	1	0	18	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:263030-263439	Cluster_6996	Pocillopora_meandrina_HIv1___xfSc0000004	263030	263439	410	69	11	0.7681159420289855	.	UAAGCUUUCGUCCAUGUUAUCACUU	37	0	68	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:332422-333223	Cluster_6997	Pocillopora_meandrina_HIv1___xfSc0000004	332422	333223	802	512	254	0.15625	-	UGUGAGUUAUGUGACCCUGAACAGC	28	39	411	13	18	17	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:334456-334777	Cluster_6998	Pocillopora_meandrina_HIv1___xfSc0000004	334456	334777	322	308	107	0.022727272727272728	-	UGCUUCUUUCUCGAUUUGUGAGAACUUCUUC	27	1	302	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:78981-79725	Cluster_6999	Pocillopora_meandrina_HIv1___xfSc0000006	78981	79725	745	342	175	0.9327485380116959	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	46	0	326	0	2	3	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:79803-80212	Cluster_7000	Pocillopora_meandrina_HIv1___xfSc0000006	79803	80212	410	195	119	0.6820512820512821	.	ACUGGAUACAAAACUGCUCGAUGC	20	0	147	1	6	5	36	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:105567-106030	Cluster_7001	Pocillopora_meandrina_HIv1___xfSc0000006	105567	106030	464	1393	192	0.10122038765254845	-	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUA	220	16	1197	53	11	32	84	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:38627-39054	Cluster_7002	Pocillopora_meandrina_HIv1___xfSc0000007	38627	39054	428	257	134	0.953307392996109	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	24	3	239	0	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:39089-39855	Cluster_7003	Pocillopora_meandrina_HIv1___xfSc0000007	39089	39855	767	469	230	0.9211087420042644	+	UCCAAUCACACACAGUUCUCCUGCGGC	67	3	448	3	0	5	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:39939-40366	Cluster_7004	Pocillopora_meandrina_HIv1___xfSc0000007	39939	40366	428	136	51	0.9117647058823529	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	57	0	128	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:40383-40958	Cluster_7005	Pocillopora_meandrina_HIv1___xfSc0000007	40383	40958	576	1257	407	0.9013524264120922	+	UCUCAUGUUGGUACUGCUCACUCGCUG	112	64	1085	11	5	48	44	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:41231-42507	Cluster_7006	Pocillopora_meandrina_HIv1___xfSc0000007	41231	42507	1277	1263	503	0.9049881235154394	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	90	9	1192	4	4	18	36	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:77076-77505	Cluster_7007	Pocillopora_meandrina_HIv1___xfSc0000007	77076	77505	430	122	36	0.9918032786885246	+	AUUGCAAGCAAACGGCUCGGAGUCUUUUUC	69	13	97	8	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:81664-82093	Cluster_7008	Pocillopora_meandrina_HIv1___xfSc0000007	81664	82093	430	289	50	0.9930795847750865	+	AUUGCAAGCCUUCUUCGUGCAAGCCUGACC	149	8	278	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:125491-126431	Cluster_7009	Pocillopora_meandrina_HIv1___xfSc0000007	125491	126431	941	2873	569	0.06021580229725026	-	UAUUUGAUCUGUCUACCUCUUUAAAGGA	246	28	2738	14	12	6	75	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:140905-141332	Cluster_7010	Pocillopora_meandrina_HIv1___xfSc0000007	140905	141332	428	202	72	0.09405940594059406	-	UGCAUUGUAAUCGGGAUAGACCUAUUGA	42	5	180	5	3	6	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:248543-248972	Cluster_7011	Pocillopora_meandrina_HIv1___xfSc0000007	248543	248972	430	1832	57	1.0	+	AUUGCAAGCAAACGGCUAGGAGUCUUCUU	1310	1	1828	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000012:38929-39359	Cluster_7012	Pocillopora_meandrina_HIv1___xfSc0000012	38929	39359	431	248	84	0.9879032258064516	+	UUGAAUACUUUAAUGACAACGAUGAAAC	58	3	241	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000012:147097-147519	Cluster_7013	Pocillopora_meandrina_HIv1___xfSc0000012	147097	147519	423	209	109	0.5023923444976076	.	UGGUAAAUGAAGGUUCCUGGAGGCAUGAC	14	9	154	5	6	21	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:13538-14068	Cluster_7014	Pocillopora_meandrina_HIv1___xfSc0000017	13538	14068	531	574	187	0.9878048780487805	+	UGCUCAUAUCUAAUAGGACAACUGCCGUC	62	1	556	1	2	2	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:39350-39877	Cluster_7015	Pocillopora_meandrina_HIv1___xfSc0000017	39350	39877	528	36562	1713	0.00043761282205568626	-	UGGGAAUACCCCGUGUUGUAGGCUU	3023	7150	17659	1209	2181	4440	3923	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:42212-43151	Cluster_7016	Pocillopora_meandrina_HIv1___xfSc0000017	42212	43151	940	1656	679	0.9993961352657005	+	UGUGGGUAACUCGAGCGUAUAA	112	526	472	199	224	137	98	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:43800-44315	Cluster_7017	Pocillopora_meandrina_HIv1___xfSc0000017	43800	44315	516	6590	1525	0.006980273141122913	-	AGUUAAGCCCUGUCGGGCGGGGUUAGUACUU	219	1913	3317	426	332	300	302	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:44827-45388	Cluster_7018	Pocillopora_meandrina_HIv1___xfSc0000017	44827	45388	562	1827	457	0.9994526546250684	+	CGUUCGCGCUCGUCCCCGC	168	728	494	154	223	140	88	N	N	nve-miR-9415
Pocillopora_meandrina_HIv1___xfSc0000017:46013-46438	Cluster_7019	Pocillopora_meandrina_HIv1___xfSc0000017	46013	46438	426	230	94	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	17	39	104	13	13	34	27	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:47102-47608	Cluster_7020	Pocillopora_meandrina_HIv1___xfSc0000017	47102	47608	507	8659	1546	0.9988451322323594	+	CAUUGCACUUCGACUGGGUUGACC	225	1758	3984	644	693	812	768	N	N	nve-miR-9415
Pocillopora_meandrina_HIv1___xfSc0000017:50458-50978	Cluster_7021	Pocillopora_meandrina_HIv1___xfSc0000017	50458	50978	521	4299	924	0.0025587345894394044	-	UGGGAAUACCCCGUGUUGUAGGCUU	188	1076	1991	202	275	401	354	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:51490-52056	Cluster_7022	Pocillopora_meandrina_HIv1___xfSc0000017	51490	52056	567	14361	1292	0.9993036696608871	+	CGUUCGCGCUCGUCCCCGC	2876	8734	1785	1240	1567	674	361	N	N	nve-miR-9415
Pocillopora_meandrina_HIv1___xfSc0000017:52682-53105	Cluster_7023	Pocillopora_meandrina_HIv1___xfSc0000017	52682	53105	424	154	78	0.0	-	CUGGGAAUACCCCGUGUUGUAGGCUU	11	37	57	5	13	21	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:54904-55405	Cluster_7024	Pocillopora_meandrina_HIv1___xfSc0000017	54904	55405	502	1715	362	0.0	-	ACCCCGUGUUGUAGGCUU	141	570	634	62	105	171	173	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:55545-55945	Cluster_7025	Pocillopora_meandrina_HIv1___xfSc0000017	55545	55945	401	131	79	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	8	31	72	8	6	8	6	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:57122-57547	Cluster_7026	Pocillopora_meandrina_HIv1___xfSc0000017	57122	57547	426	279	127	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	20	62	124	11	18	35	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:59339-59763	Cluster_7027	Pocillopora_meandrina_HIv1___xfSc0000017	59339	59763	425	155	70	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	19	35	68	10	7	23	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:59972-60382	Cluster_7028	Pocillopora_meandrina_HIv1___xfSc0000017	59972	60382	411	185	113	0.9945945945945946	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	44	94	5	13	23	6	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:61559-61983	Cluster_7029	Pocillopora_meandrina_HIv1___xfSc0000017	61559	61983	425	229	102	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	23	48	97	10	13	36	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:62191-62601	Cluster_7030	Pocillopora_meandrina_HIv1___xfSc0000017	62191	62601	411	184	123	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	37	89	12	15	18	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:62613-63037	Cluster_7031	Pocillopora_meandrina_HIv1___xfSc0000017	62613	63037	425	264	159	1.0	+	AUACUUACCUGACGCGGG	17	77	88	33	16	33	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:63779-64204	Cluster_7032	Pocillopora_meandrina_HIv1___xfSc0000017	63779	64204	426	418	153	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	34	95	192	12	28	42	49	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:64402-64821	Cluster_7033	Pocillopora_meandrina_HIv1___xfSc0000017	64402	64821	420	167	101	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	17	32	89	7	12	16	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:65997-66422	Cluster_7034	Pocillopora_meandrina_HIv1___xfSc0000017	65997	66422	426	424	170	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	25	96	174	18	35	52	49	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:66629-67039	Cluster_7035	Pocillopora_meandrina_HIv1___xfSc0000017	66629	67039	411	215	125	0.9953488372093023	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	55	97	10	19	19	15	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:68215-68640	Cluster_7036	Pocillopora_meandrina_HIv1___xfSc0000017	68215	68640	426	326	143	0.003067484662576687	-	GGAAUACCCCGUGUUGUAGGCUU	21	62	132	11	31	49	41	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:68849-69809	Cluster_7037	Pocillopora_meandrina_HIv1___xfSc0000017	68849	69809	961	1462	645	0.9972640218878249	+	CGUUCGCGCUCGUCCCCGC	108	456	496	118	176	114	102	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:70434-70859	Cluster_7038	Pocillopora_meandrina_HIv1___xfSc0000017	70434	70859	426	407	162	0.002457002457002457	-	UGGGAAUACCCCGUGUUGUAGGCUU	32	90	174	19	23	61	40	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:71066-71476	Cluster_7039	Pocillopora_meandrina_HIv1___xfSc0000017	71066	71476	411	197	115	0.9949238578680203	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	51	89	9	15	18	15	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:72652-73077	Cluster_7040	Pocillopora_meandrina_HIv1___xfSc0000017	72652	73077	426	408	145	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	27	97	176	16	28	56	35	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:73284-73694	Cluster_7041	Pocillopora_meandrina_HIv1___xfSc0000017	73284	73694	411	202	137	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	8	54	96	6	13	21	12	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:74870-75295	Cluster_7042	Pocillopora_meandrina_HIv1___xfSc0000017	74870	75295	426	389	140	0.002570694087403599	-	UGGGAAUACCCCGUGUUGUAGGCUU	30	86	162	18	31	51	41	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:75502-75912	Cluster_7043	Pocillopora_meandrina_HIv1___xfSc0000017	75502	75912	411	217	129	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	47	108	11	16	20	15	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:77088-77512	Cluster_7044	Pocillopora_meandrina_HIv1___xfSc0000017	77088	77512	425	251	116	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	19	50	106	17	12	37	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:77720-78130	Cluster_7045	Pocillopora_meandrina_HIv1___xfSc0000017	77720	78130	411	202	118	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	42	91	17	19	18	15	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:79307-79733	Cluster_7046	Pocillopora_meandrina_HIv1___xfSc0000017	79307	79733	427	448	159	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	31	89	201	28	28	65	37	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:79930-80349	Cluster_7047	Pocillopora_meandrina_HIv1___xfSc0000017	79930	80349	420	209	120	0.9952153110047847	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	52	106	7	8	26	10	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:81525-81950	Cluster_7048	Pocillopora_meandrina_HIv1___xfSc0000017	81525	81950	426	425	151	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	37	80	187	27	28	69	34	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:82157-82567	Cluster_7049	Pocillopora_meandrina_HIv1___xfSc0000017	82157	82567	411	193	124	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	45	100	10	11	13	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:83743-84169	Cluster_7050	Pocillopora_meandrina_HIv1___xfSc0000017	83743	84169	427	399	153	0.005012531328320802	-	UGGGAAUACCCCGUGUUGUAGGCUU	28	83	202	13	29	44	28	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:84370-84792	Cluster_7051	Pocillopora_meandrina_HIv1___xfSc0000017	84370	84792	423	247	137	0.9959514170040485	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	60	121	10	22	20	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:85961-86386	Cluster_7052	Pocillopora_meandrina_HIv1___xfSc0000017	85961	86386	426	295	122	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	19	62	127	13	17	42	34	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:86593-87003	Cluster_7053	Pocillopora_meandrina_HIv1___xfSc0000017	86593	87003	411	194	119	0.9948453608247423	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	45	82	15	21	18	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:88178-88697	Cluster_7054	Pocillopora_meandrina_HIv1___xfSc0000017	88178	88697	520	4515	863	0.000664451827242525	-	UGGGAAUACCCCGUGUUGUAGGCUU	284	883	2208	173	321	483	447	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:88822-89222	Cluster_7055	Pocillopora_meandrina_HIv1___xfSc0000017	88822	89222	401	145	84	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	23	80	12	11	7	12	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:89225-89774	Cluster_7056	Pocillopora_meandrina_HIv1___xfSc0000017	89225	89774	550	1249	511	1.0	+	CGUUCGCGCUCGUCCCCA	48	307	534	108	126	98	76	N	N	nve-miR-9415
Pocillopora_meandrina_HIv1___xfSc0000017:90404-90825	Cluster_7057	Pocillopora_meandrina_HIv1___xfSc0000017	90404	90825	422	99	51	0.0	-	UGGGAAUACCCCGUGUUGUAGGCUU	12	20	37	8	8	15	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:91037-91442	Cluster_7058	Pocillopora_meandrina_HIv1___xfSc0000017	91037	91442	406	131	80	0.9923664122137404	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	22	78	7	7	4	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:92620-93041	Cluster_7059	Pocillopora_meandrina_HIv1___xfSc0000017	92620	93041	422	104	55	0.009615384615384616	-	GGAAUACCCCGUGUUGUAGGCUU	11	24	38	7	9	16	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:93242-93661	Cluster_7060	Pocillopora_meandrina_HIv1___xfSc0000017	93242	93661	420	152	90	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	27	94	5	7	8	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:95473-95879	Cluster_7061	Pocillopora_meandrina_HIv1___xfSc0000017	95473	95879	407	159	105	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	39	85	5	8	10	12	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:97054-97573	Cluster_7062	Pocillopora_meandrina_HIv1___xfSc0000017	97054	97573	520	6283	703	0.0007957981855801369	-	GGAAUACCCCGUGUUGUAGGCUU	947	2636	424	461	833	1738	191	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:97674-98247	Cluster_7063	Pocillopora_meandrina_HIv1___xfSc0000017	97674	98247	574	8331	956	0.9995198655623575	+	CAAGUGUAGUAUCUGUUCU	554	2327	4075	221	645	721	342	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000021:6767-7195	Cluster_7064	Pocillopora_meandrina_HIv1___xfSc0000021	6767	7195	429	168	48	0.023809523809523808	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	32	1	130	3	0	19	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000021:7791-8219	Cluster_7065	Pocillopora_meandrina_HIv1___xfSc0000021	7791	8219	429	2045	100	0.009779951100244499	-	UGAAACUCUGAUCUGAAAAUAUUUUUA	1189	6	2029	2	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000058:8405-8896	Cluster_7066	Pocillopora_meandrina_HIv1___xfSc0000058	8405	8896	492	366	160	0.06830601092896176	-	UGUUCUUGUAGUCUUUUAACAGCUUGUU	29	5	350	1	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000058:9997-10445	Cluster_7067	Pocillopora_meandrina_HIv1___xfSc0000058	9997	10445	449	338	151	0.10946745562130178	-	UACAGCCGAUAUGGAAGCAUUUAAUUC	29	3	314	0	2	7	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000059:13828-14262	Cluster_7068	Pocillopora_meandrina_HIv1___xfSc0000059	13828	14262	435	301	105	1.0	+	UGUACUCUGCCGAUAGCUUGCGAUUUUCAUC	52	0	292	0	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000146:258-1373	Cluster_7069	Pocillopora_meandrina_HIv1___xfSc0000146	258	1373	1116	4732	878	0.8706677937447168	+	UACUUUCUGAUUGACUUGGAGUGUGGGG	897	60	4141	18	27	161	325	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000146:25017-25637	Cluster_7070	Pocillopora_meandrina_HIv1___xfSc0000146	25017	25637	621	786	170	0.33587786259541985	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	140	5	624	0	3	125	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:3123-3572	Cluster_7071	Pocillopora_meandrina_HIv1___xfSc0000168	3123	3572	450	324	158	0.15432098765432098	-	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	42	3	281	3	6	6	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:3831-4338	Cluster_7072	Pocillopora_meandrina_HIv1___xfSc0000168	3831	4338	508	669	304	0.07473841554559044	-	UCUUCUUUGGACUGUUUUUUGCAUAAAGGA	36	4	626	2	2	10	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:6065-6492	Cluster_7073	Pocillopora_meandrina_HIv1___xfSc0000168	6065	6492	428	189	110	0.12698412698412698	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	28	1	174	3	2	1	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:6834-7264	Cluster_7074	Pocillopora_meandrina_HIv1___xfSc0000168	6834	7264	431	654	182	0.016819571865443424	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	157	1	638	0	3	6	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:7670-8095	Cluster_7075	Pocillopora_meandrina_HIv1___xfSc0000168	7670	8095	426	164	78	0.12195121951219512	-	UCACUUUCCUGGCUGUCCAUGUUGAC	38	2	150	1	1	9	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:15157-15584	Cluster_7076	Pocillopora_meandrina_HIv1___xfSc0000168	15157	15584	428	180	86	0.005555555555555556	-	UGUACUUCUCUGACCACUCUAGUUCAGGA	45	7	164	4	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:15951-16965	Cluster_7077	Pocillopora_meandrina_HIv1___xfSc0000168	15951	16965	1015	1074	393	0.000931098696461825	-	UGGGAAUUGUAACAAAAAGUGUUAGUGUG	46	11	1030	5	2	15	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:17735-18328	Cluster_7078	Pocillopora_meandrina_HIv1___xfSc0000168	17735	18328	594	415	200	0.0	-	UUGGCUGAUCUUCUUUAUUAUAUGUGAGU	39	3	407	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:21390-22809	Cluster_7079	Pocillopora_meandrina_HIv1___xfSc0000168	21390	22809	1420	1481	519	0.16475354490209318	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	98	36	1361	7	2	31	44	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:22909-23332	Cluster_7080	Pocillopora_meandrina_HIv1___xfSc0000168	22909	23332	424	91	36	0.054945054945054944	-	UACGUGUAGACUGAGCCAUUGCCUAGU	27	2	80	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:26707-27107	Cluster_7081	Pocillopora_meandrina_HIv1___xfSc0000168	26707	27107	401	138	66	0.021739130434782608	-	UAACACAAUGAACCAAGGCACGUCCAGA	11	0	122	0	2	9	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:31977-32817	Cluster_7082	Pocillopora_meandrina_HIv1___xfSc0000168	31977	32817	841	1223	358	0.1545380212591987	-	UAAACUACUAACGGCUUUUGACAAUGCUUU	111	13	1126	2	13	28	41	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000175:30110-30936	Cluster_7083	Pocillopora_meandrina_HIv1___xfSc0000175	30110	30936	827	414	121	0.9734299516908212	+	UAGGACAACUGAGAAUCCACGUAGACUC	107	1	396	1	8	2	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000206:12993-13422	Cluster_7084	Pocillopora_meandrina_HIv1___xfSc0000206	12993	13422	430	15942	181	0.9959854472462677	+	UACCAAGGUCUUGUAGUCUAGUACAACU	6066	12	15825	4	47	8	46	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000212:2286-2714	Cluster_7085	Pocillopora_meandrina_HIv1___xfSc0000212	2286	2714	429	209	102	0.8899521531100478	+	UGACUUAUAACAGCGACUUUGCACUUUUA	39	8	193	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:18834-19448	Cluster_7086	Pocillopora_meandrina_HIv1___xfSc0000217	18834	19448	615	585	163	0.9025641025641026	+	UGACUGUCGGUCAACUGUCGGCC	47	14	447	3	10	52	59	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:24561-24987	Cluster_7087	Pocillopora_meandrina_HIv1___xfSc0000217	24561	24987	427	159	54	1.0	+	ACAGAUCGGAUCACAGAUCAUGUGAGC	45	28	129	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:27125-27697	Cluster_7088	Pocillopora_meandrina_HIv1___xfSc0000217	27125	27697	573	225	71	0.008888888888888889	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUAAG	27	1	224	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:33134-33560	Cluster_7089	Pocillopora_meandrina_HIv1___xfSc0000217	33134	33560	427	145	70	0.06206896551724138	-	UGAUCUGAUUUUACUCGUUGUAGAUAAAAC	14	2	134	0	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:33658-34458	Cluster_7090	Pocillopora_meandrina_HIv1___xfSc0000217	33658	34458	801	742	347	0.06334231805929919	-	UGAUCUGGUUUGAGUCUUGUAUUAGAAC	25	7	710	2	2	8	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:34510-34927	Cluster_7091	Pocillopora_meandrina_HIv1___xfSc0000217	34510	34927	418	74	24	0.0	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	18	0	73	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000228:24353-24856	Cluster_7092	Pocillopora_meandrina_HIv1___xfSc0000228	24353	24856	504	595	310	0.30756302521008405	.	UGAUCUACAGCUCUUAGGAUGUCAUUUGA	59	35	502	9	14	13	22	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000237:9779-10472	Cluster_7093	Pocillopora_meandrina_HIv1___xfSc0000237	9779	10472	694	1780	449	0.0005617977528089888	-	GUUAGUGAUGAUGAAGUAAAAGGUCUGAUGU	379	202	1252	81	65	87	93	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000262:25212-25643	Cluster_7094	Pocillopora_meandrina_HIv1___xfSc0000262	25212	25643	432	366	79	0.9371584699453552	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	65	0	365	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000264:2370-2797	Cluster_7095	Pocillopora_meandrina_HIv1___xfSc0000264	2370	2797	428	94	39	1.0	+	AAAGAAACGAAUCGGUUUAAACUCACAUU	24	5	82	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000264:26323-26751	Cluster_7096	Pocillopora_meandrina_HIv1___xfSc0000264	26323	26751	429	131	34	0.183206106870229	-	UGUAUCUUCAGAGGACUUCAGGUCGCUCA	52	2	123	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000275:3122-3552	Cluster_7097	Pocillopora_meandrina_HIv1___xfSc0000275	3122	3552	431	135	45	0.0	-	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	62	3	130	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000284:20495-20921	Cluster_7098	Pocillopora_meandrina_HIv1___xfSc0000284	20495	20921	427	145	46	0.06206896551724138	-	UAGGACUAACAUCUCGACUUCUUA	23	1	117	0	0	0	27	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:8594-9029	Cluster_7099	Pocillopora_meandrina_HIv1___xfSc0000343	8594	9029	436	434	147	0.8133640552995391	+	UGAAUGUUGCGAAGCUCUUCGUCCAAAAGA	124	11	388	8	1	14	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:9872-10368	Cluster_7100	Pocillopora_meandrina_HIv1___xfSc0000343	9872	10368	497	992	216	0.4415322580645161	.	AUUCAUGUUAGGUGGUAGAGGUGU	152	52	489	13	87	115	236	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:11557-12139	Cluster_7101	Pocillopora_meandrina_HIv1___xfSc0000343	11557	12139	583	2473	445	0.8164173069146785	+	UUUCCGUUGCAUUAGAGGACUUCUUGUU	730	56	2249	37	11	25	95	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:78-509	Cluster_7102	Pocillopora_meandrina_HIv1___xfSc0000376	78	509	432	608	88	0.9983552631578947	+	UAUAAUAACUGUUGGUUUCCUGGACAAUC	121	4	583	7	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:1159-1588	Cluster_7103	Pocillopora_meandrina_HIv1___xfSc0000376	1159	1588	430	127	54	1.0	+	UGCUCUUAAGGAGUCGUCCGAUUUUGAAUU	19	0	126	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:1629-2225	Cluster_7104	Pocillopora_meandrina_HIv1___xfSc0000376	1629	2225	597	649	170	0.9768875192604006	+	UAUGUCGUGUGUGCACUUUGGUGACUGC	85	6	612	5	3	10	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:3024-3453	Cluster_7105	Pocillopora_meandrina_HIv1___xfSc0000376	3024	3453	430	1036	74	1.0	+	UGCGAAACCGCGUGUAAAUUCUCUACUAUU	487	0	1028	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:11926-12345	Cluster_7106	Pocillopora_meandrina_HIv1___xfSc0000376	11926	12345	420	139	87	1.0	+	UUUCCUUUCUUUUGUACUUGUCGGACGUGA	13	3	131	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:13856-14561	Cluster_7107	Pocillopora_meandrina_HIv1___xfSc0000376	13856	14561	706	212	69	1.0	+	UGAAACGGUCAAUCUCCUUGAAAUCUGGGA	54	1	205	0	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:14913-15441	Cluster_7108	Pocillopora_meandrina_HIv1___xfSc0000376	14913	15441	529	487	147	0.23613963039014374	.	CAGUAUCACAAGAUGGGAAUGAGG	54	14	264	26	7	58	118	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:21854-22264	Cluster_7109	Pocillopora_meandrina_HIv1___xfSc0000376	21854	22264	411	97	36	0.9587628865979382	+	UGUGCAAGCACCAAGUUGAAUGAGAGC	16	0	91	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:23769-24182	Cluster_7110	Pocillopora_meandrina_HIv1___xfSc0000376	23769	24182	414	147	75	0.5578231292517006	.	ACCUAAACCAAGCUGCUGUAGACA	25	1	100	1	0	16	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:24187-24614	Cluster_7111	Pocillopora_meandrina_HIv1___xfSc0000376	24187	24614	428	197	43	0.05583756345177665	-	AUCUUUCCGAGGCUCUGAGUGGG	54	1	79	15	14	75	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:27819-28554	Cluster_7112	Pocillopora_meandrina_HIv1___xfSc0000376	27819	28554	736	393	153	0.9312977099236641	+	UACGUGUAGAAAGCCUUCUCUGACAUC	29	3	371	0	3	10	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:28774-29187	Cluster_7113	Pocillopora_meandrina_HIv1___xfSc0000376	28774	29187	414	122	67	0.9426229508196722	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	20	2	114	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:29864-30446	Cluster_7114	Pocillopora_meandrina_HIv1___xfSc0000376	29864	30446	583	692	325	0.911849710982659	+	UAAUGAAGUCGUAAUUUGUCCAUCC	87	7	658	1	9	8	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:33482-33911	Cluster_7115	Pocillopora_meandrina_HIv1___xfSc0000376	33482	33911	430	693	188	0.9812409812409812	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	197	2	675	1	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:34260-34679	Cluster_7116	Pocillopora_meandrina_HIv1___xfSc0000376	34260	34679	420	163	100	0.9079754601226994	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	23	1	156	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:35966-36663	Cluster_7117	Pocillopora_meandrina_HIv1___xfSc0000376	35966	36663	698	309	133	0.9320388349514563	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	48	0	283	1	1	16	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:41523-41955	Cluster_7118	Pocillopora_meandrina_HIv1___xfSc0000376	41523	41955	433	356	139	0.9241573033707865	+	UUGGUGUGUUCAAGUAUCUUUGAUUCUGA	30	2	346	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:45892-46320	Cluster_7119	Pocillopora_meandrina_HIv1___xfSc0000376	45892	46320	429	93	31	1.0	+	UCAAAUCUGUACCAGUGCCACUCAGCAUC	50	1	91	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000423:29248-29906	Cluster_7120	Pocillopora_meandrina_HIv1___xfSc0000423	29248	29906	659	1703	257	0.07339988256018791	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCU	150	10	1504	14	38	106	31	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000423:30169-30595	Cluster_7121	Pocillopora_meandrina_HIv1___xfSc0000423	30169	30595	427	105	41	0.0761904761904762	-	UACGUGUAGACUGAGCCAUUGCCUAGU	29	2	88	2	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000423:34006-34427	Cluster_7122	Pocillopora_meandrina_HIv1___xfSc0000423	34006	34427	422	140	43	0.07142857142857142	-	UAAUCGCAACAGGGAAACUAGACUCCGA	22	4	129	0	0	7	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000436:26677-27108	Cluster_7123	Pocillopora_meandrina_HIv1___xfSc0000436	26677	27108	432	182	75	0.0	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	18	1	170	0	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000436:42973-43542	Cluster_7124	Pocillopora_meandrina_HIv1___xfSc0000436	42973	43542	570	779	137	0.9948652118100129	+	UAGACAUGACAUCAGCCUCUGAGCCAACUC	266	4	771	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:3977-4487	Cluster_7125	Pocillopora_meandrina_HIv1___xfSc0000445	3977	4487	511	1307	337	0.13389441469013008	-	UGAUCCGCUCCCAUUCGAACUUUAGGC	119	5	1183	5	12	40	62	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:21281-22084	Cluster_7126	Pocillopora_meandrina_HIv1___xfSc0000445	21281	22084	804	428	188	0.1191588785046729	-	UGUUCCUGAACUUCGCGCGAAAACUCGA	43	1	395	0	3	11	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:22475-22901	Cluster_7127	Pocillopora_meandrina_HIv1___xfSc0000445	22475	22901	427	194	94	0.211340206185567	.	UGAACAAGGAAACACCAAAUAAUAUCUC	17	4	171	2	2	5	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:1-800	Cluster_7128	Pocillopora_meandrina_HIv1___xfSc0000477	1	800	800	704	318	0.09659090909090909	-	UGAUCUAAAUUUAACAAUCUUGCCUUUU	61	6	642	5	7	8	36	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:846-1421	Cluster_7129	Pocillopora_meandrina_HIv1___xfSc0000477	846	1421	576	3241	512	0.01079913606911447	-	UGUGAUAUUCCGAACACUUGAAUGAGUCA	214	14	3087	9	12	36	83	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:1796-2238	Cluster_7130	Pocillopora_meandrina_HIv1___xfSc0000477	1796	2238	443	1566	231	0.027458492975734355	-	UUCGAUCUAUACCAUCUGGAGGCUAAUU	308	3	1538	4	2	3	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:15549-15965	Cluster_7131	Pocillopora_meandrina_HIv1___xfSc0000477	15549	15965	417	75	26	0.013333333333333334	-	UUGAGUGACAUGGGAAUGAAUUAGUCAGA	22	3	60	0	5	1	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:20269-20696	Cluster_7132	Pocillopora_meandrina_HIv1___xfSc0000477	20269	20696	428	80	21	0.05	-	GAAGAACUCAUUAACCGGCUCCGUAAAG	35	2	76	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:39656-40079	Cluster_7133	Pocillopora_meandrina_HIv1___xfSc0000540	39656	40079	424	267	63	0.08614232209737828	-	AUGGACAGAACACAGGAAGUGCU	65	8	87	4	8	125	35	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:41358-41787	Cluster_7134	Pocillopora_meandrina_HIv1___xfSc0000540	41358	41787	430	180	51	0.9833333333333333	+	UAAGAUAUCGUUAACAACUCGAAGAAGCA	32	1	176	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:10286-10857	Cluster_7135	Pocillopora_meandrina_HIv1___xfSc0000555	10286	10857	572	2772	291	0.9985569985569985	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	697	3	2752	5	0	8	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:20847-21271	Cluster_7136	Pocillopora_meandrina_HIv1___xfSc0000555	20847	21271	425	154	69	0.9675324675324676	+	UUUCCUAUUUUCAGUUAAAAACUCUUAU	12	0	153	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:21513-21935	Cluster_7137	Pocillopora_meandrina_HIv1___xfSc0000555	21513	21935	423	223	82	0.9865470852017937	+	UGUCAUGUCAACGUCUGGUUGGAACCAUC	40	1	220	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:22028-22721	Cluster_7138	Pocillopora_meandrina_HIv1___xfSc0000555	22028	22721	694	764	306	0.9057591623036649	+	UGUAAUACAGGGCAAGAAGUUGAAUUAAAC	24	14	713	3	6	7	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:22903-23332	Cluster_7139	Pocillopora_meandrina_HIv1___xfSc0000555	22903	23332	430	190	70	0.9947368421052631	+	UUGGAGAUGAUCUUUGCGAUGACAUUGUG	40	3	182	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:34374-34813	Cluster_7140	Pocillopora_meandrina_HIv1___xfSc0000555	34374	34813	440	2475	312	0.9773737373737373	+	UAAUUUAUCCAUGUAUUCUUGAAGACGU	307	6	2412	4	1	29	23	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:35795-36771	Cluster_7141	Pocillopora_meandrina_HIv1___xfSc0000555	35795	36771	977	697	330	0.9124820659971306	+	UUCGAUCUUUUCUGUGUAAUGUGUAGC	31	9	653	7	4	8	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:39714-40144	Cluster_7142	Pocillopora_meandrina_HIv1___xfSc0000555	39714	40144	431	553	176	0.059674502712477394	-	UAACGUAGUGGUAUCCAUUGAACAAGUUC	89	4	475	0	5	5	64	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:40403-41451	Cluster_7143	Pocillopora_meandrina_HIv1___xfSc0000555	40403	41451	1049	925	402	0.2735135135135135	.	ACGUAUUGCAAGCUUGAAAUUAACCACA	42	7	866	11	5	15	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000566:34959-35386	Cluster_7144	Pocillopora_meandrina_HIv1___xfSc0000566	34959	35386	428	143	32	0.993006993006993	+	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	24	0	142	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:366-1215	Cluster_7145	Pocillopora_meandrina_HIv1___xfSc0000567	366	1215	850	351	168	0.1168091168091168	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	44	9	317	3	4	11	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:4418-4837	Cluster_7146	Pocillopora_meandrina_HIv1___xfSc0000567	4418	4837	420	82	20	1.0	+	UUGGUGUCAUAGAAGCUUGUAGUAUCU	37	1	78	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:6059-8283	Cluster_7147	Pocillopora_meandrina_HIv1___xfSc0000567	6059	8283	2225	21290	2473	0.971488961953969	+	UCCGAGACUGUAGAUCCGAGUUGAUCCA	3272	104	20412	106	141	183	344	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:8785-9268	Cluster_7148	Pocillopora_meandrina_HIv1___xfSc0000567	8785	9268	484	388	167	0.9458762886597938	+	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	39	3	376	2	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:9270-10550	Cluster_7149	Pocillopora_meandrina_HIv1___xfSc0000567	9270	10550	1281	1792	824	0.8225446428571429	+	UGUAACGGAACAGACUCCAAUAUACA	46	24	1567	19	22	40	120	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:25703-26133	Cluster_7150	Pocillopora_meandrina_HIv1___xfSc0000567	25703	26133	431	156	47	1.0	+	UGCAUGAUCUGUCUAAGCUAAGGAAACGAGC	42	1	155	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:39213-39615	Cluster_7151	Pocillopora_meandrina_HIv1___xfSc0000567	39213	39615	403	155	77	1.0	+	UGAGAAGAUUGAUAAGCUUGUUCGAGGCGU	27	1	153	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:42864-43305	Cluster_7152	Pocillopora_meandrina_HIv1___xfSc0000567	42864	43305	442	437	155	0.9862700228832952	+	UGCUUUCUGUUCUCUUGUUCUCCAACAAA	49	2	425	1	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000570:34339-34766	Cluster_7153	Pocillopora_meandrina_HIv1___xfSc0000570	34339	34766	428	118	26	1.0	+	AACUACUGCUCGUACUCUAGAUGACAAU	20	0	118	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:17495-17904	Cluster_7154	Pocillopora_meandrina_HIv1___xfSc0000579	17495	17904	410	164	104	0.8963414634146342	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	13	1	153	0	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:18000-18419	Cluster_7155	Pocillopora_meandrina_HIv1___xfSc0000579	18000	18419	420	280	178	0.9464285714285714	+	UCAGACACGUGGAUACUUGCGAUGAAGU	13	1	261	2	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:18777-19191	Cluster_7156	Pocillopora_meandrina_HIv1___xfSc0000579	18777	19191	415	206	103	0.9320388349514563	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	15	1	193	4	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:19932-20359	Cluster_7157	Pocillopora_meandrina_HIv1___xfSc0000579	19932	20359	428	184	63	0.7336956521739131	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	27	0	148	0	1	2	33	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:27709-28147	Cluster_7158	Pocillopora_meandrina_HIv1___xfSc0000583	27709	28147	439	631	153	0.03645007923930269	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	93	2	608	0	0	16	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:28385-28811	Cluster_7159	Pocillopora_meandrina_HIv1___xfSc0000583	28385	28811	427	244	130	0.12704918032786885	-	UGAGUCGAGGUUAUUCACAAUACGAGC	52	1	217	2	4	5	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:29247-30468	Cluster_7160	Pocillopora_meandrina_HIv1___xfSc0000583	29247	30468	1222	2057	478	0.18327661643169665	-	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	524	14	1951	1	8	24	59	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:31467-32249	Cluster_7161	Pocillopora_meandrina_HIv1___xfSc0000583	31467	32249	783	345	128	0.21739130434782608	.	UAUACUCCAAAGGUUCUGAAAACGAAUG	43	5	276	4	4	28	28	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:33456-33886	Cluster_7162	Pocillopora_meandrina_HIv1___xfSc0000583	33456	33886	431	1050	114	0.02	-	UAACUUCAACUAGAUCGAAAUACUCGUGA	650	27	990	5	4	18	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000596:34757-35844	Cluster_7163	Pocillopora_meandrina_HIv1___xfSc0000596	34757	35844	1088	1747	526	0.8815111619919863	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	220	12	1632	13	24	33	33	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:1-6639	Cluster_7164	Pocillopora_meandrina_HIv1___xfSc0000616	1	6639	6639	7097370	132664	0.00024163880423311735	-	CUCGGGCUGAGACUUGAAGCG	1474988	1062066	2309077	1882259	595515	467031	781422	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:9552-15450	Cluster_7165	Pocillopora_meandrina_HIv1___xfSc0000616	9552	15450	5899	5979764	112738	0.0001025124068441497	-	CUCGGGCUGAGACUUGAAGCG	1477222	840583	1591781	1851023	549369	419611	727397	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:24459-24889	Cluster_7166	Pocillopora_meandrina_HIv1___xfSc0000616	24459	24889	431	10818	374	0.9999075614716214	+	GGGGGUAUAGCUCAGUGGUAGA	3821	1453	3785	636	4339	176	429	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000621:37651-38093	Cluster_7167	Pocillopora_meandrina_HIv1___xfSc0000621	37651	38093	443	251	118	0.8725099601593626	+	UCCGUCUAUCUCCGCUCGAACCUUUGGAU	25	4	209	2	3	2	31	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000655:10705-11254	Cluster_7168	Pocillopora_meandrina_HIv1___xfSc0000655	10705	11254	550	367	127	0.7193460490463215	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	71	21	315	1	14	8	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000655:14051-14479	Cluster_7169	Pocillopora_meandrina_HIv1___xfSc0000655	14051	14479	429	159	37	0.0	-	UCUGGAAGCAUUAUCUGCCGGUCUGCCUG	51	1	155	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:7790-8388	Cluster_7170	Pocillopora_meandrina_HIv1___xfSc0000704	7790	8388	599	335	86	0.8149253731343283	+	UGGAAUCAUGCCUUGCAUCUGUUAUAAC	91	1	294	0	1	32	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:8925-9753	Cluster_7171	Pocillopora_meandrina_HIv1___xfSc0000704	8925	9753	829	675	253	0.5170370370370371	.	UAUAUGGAGUCGUUCUCUGCUGAAGAUG	61	28	520	29	4	19	75	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:21981-22838	Cluster_7172	Pocillopora_meandrina_HIv1___xfSc0000704	21981	22838	858	345	184	0.12753623188405797	-	UGAGAUCUUUUUAGCUUGAGUUUGUUGA	30	1	332	0	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:22891-23317	Cluster_7173	Pocillopora_meandrina_HIv1___xfSc0000704	22891	23317	427	146	85	0.15753424657534246	-	UGUAUUGAUUGAACUUGUCGGUUGACC	12	2	125	4	0	10	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:24433-24834	Cluster_7174	Pocillopora_meandrina_HIv1___xfSc0000704	24433	24834	402	152	75	0.46710526315789475	.	UCUGAUCGACGAGUUUCAAUCCUUUGU	19	4	122	0	3	11	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:25875-26481	Cluster_7175	Pocillopora_meandrina_HIv1___xfSc0000704	25875	26481	607	546	92	0.9871794871794872	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	114	0	534	1	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:26497-27293	Cluster_7176	Pocillopora_meandrina_HIv1___xfSc0000704	26497	27293	797	261	97	0.9655172413793104	+	UAGGGACCUCACGGCUUACUGCUGAAGU	27	14	243	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:28347-28833	Cluster_7177	Pocillopora_meandrina_HIv1___xfSc0000704	28347	28833	487	5044	431	0.9694686756542427	+	UAUGUUGAACGAGAACUGAGGACCUCGAUC	873	15	4865	9	31	61	63	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000705:276-695	Cluster_7178	Pocillopora_meandrina_HIv1___xfSc0000705	276	695	420	187	16	0.0	-	GUGAAAGGCUAAACAAACUU	56	171	0	10	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000705:30666-31330	Cluster_7179	Pocillopora_meandrina_HIv1___xfSc0000705	30666	31330	665	540	100	0.8944444444444445	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	299	2	518	1	0	6	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000716:16771-17199	Cluster_7180	Pocillopora_meandrina_HIv1___xfSc0000716	16771	17199	429	239	71	0.9497907949790795	+	AUCUUCUGAAUCAAGAAAAAAGAGGCUGG	93	0	236	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000760:22912-23336	Cluster_7181	Pocillopora_meandrina_HIv1___xfSc0000760	22912	23336	425	83	15	0.04819277108433735	-	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	57	0	82	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000765:14969-15396	Cluster_7182	Pocillopora_meandrina_HIv1___xfSc0000765	14969	15396	428	125	21	0.0	-	AAAUCAAACAUAUCGCGGCAAGGGUGGA	63	3	113	1	2	5	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000811:4425-4855	Cluster_7183	Pocillopora_meandrina_HIv1___xfSc0000811	4425	4855	431	1603	89	0.9993761696818465	+	UUGGAAUUCGAAGCAAGUAACAAUUGACAGG	557	1	1600	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000812:24713-25141	Cluster_7184	Pocillopora_meandrina_HIv1___xfSc0000812	24713	25141	429	363	54	0.0027548209366391185	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	251	1	351	0	1	8	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000824:3688-4115	Cluster_7185	Pocillopora_meandrina_HIv1___xfSc0000824	3688	4115	428	96	39	0.010416666666666666	-	ACGAAAAUAGUAGAAUGAAGUCAGAAGC	15	1	94	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000824:11830-13068	Cluster_7186	Pocillopora_meandrina_HIv1___xfSc0000824	11830	13068	1239	13499	1161	0.017705015186310097	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2202	55	13184	15	68	71	106	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:18635-19900	Cluster_7187	Pocillopora_meandrina_HIv1___xfSc0000836	18635	19900	1266	26119	2665	0.8343351583138712	+	UGAUGAAUUCACAUGUUGACGAACACUUGA	3461	308	22574	214	568	862	1593	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:31963-33875	Cluster_7188	Pocillopora_meandrina_HIv1___xfSc0000836	31963	33875	1913	5473	1424	0.9349534076374931	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	470	21	5236	17	23	60	116	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:34489-35192	Cluster_7189	Pocillopora_meandrina_HIv1___xfSc0000836	34489	35192	704	299	129	0.9565217391304348	+	UUAUAUAUUAAAUCUGCUUGAAUGAUCGC	18	1	271	2	5	10	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:1884-2309	Cluster_7190	Pocillopora_meandrina_HIv1___xfSc0000840	1884	2309	426	170	65	0.7764705882352941	.	AUUGAUUCUAUUUUGUACGGCCUAGU	43	5	148	3	10	4	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:7618-8047	Cluster_7191	Pocillopora_meandrina_HIv1___xfSc0000840	7618	8047	430	1307	48	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUG	1058	0	1306	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:28785-29216	Cluster_7192	Pocillopora_meandrina_HIv1___xfSc0000840	28785	29216	432	266	95	0.6165413533834586	.	UACCGUGAGACUGAAGAACAAAAUUCAAA	34	2	237	0	7	6	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:31255-31871	Cluster_7193	Pocillopora_meandrina_HIv1___xfSc0000868	31255	31871	617	625	183	0.9616	+	UUCAGUUACGCUUUCGCUCUAAUAGUUGUU	140	7	597	0	0	7	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:32924-34952	Cluster_7194	Pocillopora_meandrina_HIv1___xfSc0000868	32924	34952	2029	3772	1192	0.8618769883351007	+	UGUAAAAUCUGGCAUCCUAUUGGAUAAC	178	38	3401	22	31	147	133	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:35232-35930	Cluster_7195	Pocillopora_meandrina_HIv1___xfSc0000868	35232	35930	699	579	218	0.917098445595855	+	UGUGUCAGAACCCGGCUUGCAUAAGUGA	122	4	536	0	7	24	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:35955-36356	Cluster_7196	Pocillopora_meandrina_HIv1___xfSc0000868	35955	36356	402	186	73	0.9408602150537635	+	UGUUAAGUUUGAUGUUCCGCUCUCUGCGUC	15	1	182	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:36592-36831	Cluster_7197	Pocillopora_meandrina_HIv1___xfSc0000868	36592	36831	240	1316	73	0.9802431610942249	+	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	1179	1	1297	1	0	4	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000886:1769-2194	Cluster_7198	Pocillopora_meandrina_HIv1___xfSc0000886	1769	2194	426	172	93	0.37209302325581395	.	UGUGACACUUUGAGACACUCGUGAGACA	20	3	150	2	0	8	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000890:8258-8889	Cluster_7199	Pocillopora_meandrina_HIv1___xfSc0000890	8258	8889	632	4331	443	0.05125836989148003	-	UUUGAUCUUGAAAUUAUGAUACCUGGAA	1832	10	4248	6	6	40	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000892:18825-19246	Cluster_7200	Pocillopora_meandrina_HIv1___xfSc0000892	18825	19246	422	101	30	0.0	-	CUUGAAUCGUUUGGACUGCGCCA	23	10	1	11	37	34	8	22	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:14310-14737	Cluster_7201	Pocillopora_meandrina_HIv1___xfSc0000953	14310	14737	428	121	26	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	51	6	113	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:24299-24708	Cluster_7202	Pocillopora_meandrina_HIv1___xfSc0000953	24299	24708	410	174	105	0.41379310344827586	.	ACUGGAUACAAAACUGCUCGAUGC	24	1	122	3	2	6	40	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:24784-25527	Cluster_7203	Pocillopora_meandrina_HIv1___xfSc0000953	24784	25527	744	325	147	0.046153846153846156	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	52	2	315	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:30618-31037	Cluster_7204	Pocillopora_meandrina_HIv1___xfSc0000953	30618	31037	420	91	26	1.0	+	UCCUCGGUAGUAUAGUGGUAAGUAUCCC	22	28	63	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:2509-3635	Cluster_7205	Pocillopora_meandrina_HIv1___xfSc0000968	2509	3635	1127	517	208	0.46034816247582205	.	AUCUUUCCGAGGCUCUGAGUGGG	40	2	334	13	24	88	56	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:6840-7575	Cluster_7206	Pocillopora_meandrina_HIv1___xfSc0000968	6840	7575	736	387	157	0.9534883720930233	+	UACGUGUAGAAAGCCUUCUCUGACAUC	23	6	359	2	0	10	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:7795-8211	Cluster_7207	Pocillopora_meandrina_HIv1___xfSc0000968	7795	8211	417	123	56	0.967479674796748	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	29	0	122	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:8885-9439	Cluster_7208	Pocillopora_meandrina_HIv1___xfSc0000968	8885	9439	555	623	278	0.9069020866773676	+	UAAUGAAGUCGUAAUUUGUCCAUCC	92	9	572	1	16	8	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:12503-12932	Cluster_7209	Pocillopora_meandrina_HIv1___xfSc0000968	12503	12932	430	683	202	0.986822840409956	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	186	2	664	1	3	9	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:14987-15422	Cluster_7210	Pocillopora_meandrina_HIv1___xfSc0000968	14987	15422	436	227	89	0.933920704845815	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	35	1	211	0	2	8	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:20544-20975	Cluster_7211	Pocillopora_meandrina_HIv1___xfSc0000968	20544	20975	432	369	124	0.943089430894309	+	UGUUUUGGUGUGUUCAAGUAUCUUUGAU	36	1	358	1	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:24909-25337	Cluster_7212	Pocillopora_meandrina_HIv1___xfSc0000968	24909	25337	429	97	24	1.0	+	UCAAAUCUGUACCAGUGCCACUCAGCAUC	61	0	97	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:31116-31529	Cluster_7213	Pocillopora_meandrina_HIv1___xfSc0000968	31116	31529	414	111	53	1.0	+	UAGUCGACUUUGUGCAACCCGAGUAA	19	0	104	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:14537-14993	Cluster_7214	Pocillopora_meandrina_HIv1___xfSc0000974	14537	14993	457	266	71	0.041353383458646614	-	UGGGCCAUGGUGGAUAGUUGAUAUUCUUC	64	3	256	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:16542-16965	Cluster_7215	Pocillopora_meandrina_HIv1___xfSc0000974	16542	16965	424	84	41	1.0	+	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	14	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:17063-17815	Cluster_7216	Pocillopora_meandrina_HIv1___xfSc0000974	17063	17815	753	642	279	1.0	+	UGCUGUACUCGACGCCAACGUUUCUUGG	29	5	627	1	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:18214-19444	Cluster_7217	Pocillopora_meandrina_HIv1___xfSc0000974	18214	19444	1231	777	284	1.0	+	UUGGACUGUGCAGCCUUAAUCAGGAACAAC	142	4	754	5	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000975:5701-6132	Cluster_7218	Pocillopora_meandrina_HIv1___xfSc0000975	5701	6132	432	3141	116	0.0006367398917542184	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2225	4	3131	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001011:6233-6661	Cluster_7219	Pocillopora_meandrina_HIv1___xfSc0001011	6233	6661	429	387	37	1.0	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	301	0	386	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001170:22863-23277	Cluster_7220	Pocillopora_meandrina_HIv1___xfSc0001170	22863	23277	415	113	74	0.035398230088495575	-	UCUGAUCUUGGCUAUUAAAUGUUGUUGA	9	0	110	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:12363-12783	Cluster_7221	Pocillopora_meandrina_HIv1___xfSc0001179	12363	12783	421	188	80	0.02127659574468085	-	UGUGGUUACGCCCUUCAAGUGAGAAAACUGA	32	2	180	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:14603-15030	Cluster_7222	Pocillopora_meandrina_HIv1___xfSc0001179	14603	15030	428	150	35	0.006666666666666667	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	45	0	149	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:15669-16097	Cluster_7223	Pocillopora_meandrina_HIv1___xfSc0001179	15669	16097	429	362	161	0.13259668508287292	-	UGCGAUUUCGUUCCUCGUCCUUGAUGAUG	47	1	318	0	4	14	25	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001276:11651-12114	Cluster_7224	Pocillopora_meandrina_HIv1___xpSc0001276	11651	12114	464	2673	69	0.035166479610924055	-	UGAUUUGUUGCUGCCCUCUUGCUGC	1128	6	2615	3	1	10	38	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001280:16194-17090	Cluster_7225	Pocillopora_meandrina_HIv1___xpSc0001280	16194	17090	897	1698	222	0.9593639575971732	+	UGAGACAGUACACACGAUUUGAUAU	230	9	1656	9	3	5	16	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001281:28695-29157	Cluster_7226	Pocillopora_meandrina_HIv1___xpSc0001281	28695	29157	463	20800	689	0.9922115384615384	+	UGAAUGCUGGUAUCUUGAUAGUAGAACA	11991	32	20523	14	41	146	44	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001344:2542-3535	Cluster_7227	Pocillopora_meandrina_HIv1___xpSc0001344	2542	3535	994	12824	814	0.015439800374298191	-	UUUGUAGGCUCUAACAGUACAUUGUU	4508	178	12428	16	42	52	108	N	N	NA