Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam Location: Pocillopora_meandrina_HIv1___Sc0000001:19145766-19145858 plus Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_848.ps Locus Name: Cluster_848 GGAAAAAGUUGUGGUCUCUCUCCGCUCUUAAAAUCUCCUAGCUAUUGAAUAGCUAGGAGGUUUUAAAAGAGGAGAGACAACACAAGCAACCUA ((......(((((...(((((((.((.((((((((((((((((((...)))))))))))))))))).)).)))))))...)))))....)).. (-44.80) ..AAAAAGUUGUGGUCUCUCUC....................................................................... len:20 al:1 .......GUUGUGGUCUCUCUC....................................................................... len:15 al:3 ....................UCCGCUCUUAAAAUCUCCa...................................................... len:19 al:10 ....................UCCaCUCUUAAAAUCUCCUAGCUA................................................. len:24 al:1 ....................UCCGCUCUUAAAAUCUCCUAaC................................................... len:22 al:3 ....................UCCGCUCUUAAAAUCUCCUAGg................................................... len:22 al:1 ....................UCCGCUCUUgAAAUCUCCUAGCU.................................................. len:23 al:1 ....................UCCGCUCUUAAAAUCUCCUAG.................................................... len:21 al:31 ....................UCCGCUCUUAAAAUCUCCUAGC................................................... len:22 al:65 ....................UCCGCUCUUAAAAUCUCCg...................................................... len:19 al:6 ....................UCCGCUCUUAAAAUCUCCc...................................................... len:19 al:6 ....................UCCGCUCUUAAAAUCUCCUAGCg.................................................. len:23 al:7 ....................UCCGCUCUUAAAAUCUCCUAGCc.................................................. len:23 al:31 ....................UCCGCUCUUAAAAUCcCCUAGCUA................................................. len:24 al:1 ....................UCCGCUCUUAAAAUCUCCUAu.................................................... len:21 al:2 ....................UCCGCUCUUAAgAUCUCCUAGC................................................... len:22 al:1 ....................UCCGCUCUUAAAAUCUCCUAGu................................................... len:22 al:23 ....................UCCGCUCUUAAAAUCUCCUAGCaA................................................. len:24 al:1 ....................UCCGCUCUUAAAAUCUCCU...................................................... len:19 al:6 ....................cCCGCUCUUAAAAUCUCCUAGCU.................................................. len:23 al:1 ....................UCCGCUCUUAAAgUCUCCUAGC................................................... len:22 al:1 ....................UCCGCUCUUAAAAUCUCCUAGa................................................... len:22 al:4 ....................UCCGCUCUUAAAgUCUCCUAGCU.................................................. len:23 al:1 ....................UCCGCUCUUAAAAUCUCCUuGCUA................................................. len:24 al:1 ....................UCCGCUCUUAAAAUCUCuUAGCU.................................................. len:23 al:1 ....................UCCGCUCUUAAAAUCUCCUAa.................................................... len:21 al:8 ....................UCCGCUCUUAAAAUCUCCUAGaU.................................................. len:23 al:1 ....................UCCGCUCUcAAAAUCUCCUAGCUA................................................. len:24 al:1 ....................UCCGCUCcUAAAAUCUCCUAGCU.................................................. len:23 al:1 ....................UCCGCUCUUAAAAUCUCCUAGCa.................................................. len:23 al:49 ....................UCCGCUCUUAAAAUCUCCUAGCUg................................................. len:24 al:5 ....................UCCGCUCUUAAAAUCUCCUAGCUAU................................................ len:25 al:1 ....................UCCGCUCUUAAAAUCUCCUAGCUA................................................. len:24 al:122 ....................UCCGCUCUUAgAAUCUCCUAGCUA................................................. len:24 al:1 ....................UCCGCUCUUAgAAUCUCCUAGCU.................................................. len:23 al:2 ....................UCCGCUCUUAAAAUCg......................................................... len:16 al:2 ....................UCCGCUCUUAAAAUCUCCUAGCcA................................................. len:24 al:3 ....................UCCGCUCUUAAAAUCUCCUAGCUuU................................................ len:25 al:4 ....................UCCGCUCUUAAAAUCUCCUcG.................................................... len:21 al:3 ....................UCCGCUCUUAAAAUCUCCUAGCUAa................................................ len:25 al:2 ....................UCCGCcCUUAAAAUCUCCUAGCU.................................................. len:23 al:2 ....................UCCGCUCUUAAAAUCUCCUAGCUu................................................. len:24 al:11 ....................UCCGCUCUUAAAAUCUCCUAc.................................................... len:21 al:2 ....................UCCGCUCUUAAAAUCUCCUA..................................................... len:20 al:4 ....................UCCGCUCUUAAAAUCUCCUAGCU.................................................. len:23 al:117 ....................cCCGCUCUUAAAAUCUCCUAGCUA................................................. len:24 al:2 ....................UCCGCUaUUAAAAUCUCCUAGC................................................... len:22 al:1 .....................CCGCUCUUAAAAUCUCCUAa.................................................... len:20 al:1 ......................CGCUCUUAAAAUCUCCUAGCUu................................................. len:22 al:6 ......................CGCUCUUAAgAUCUCCUAGC................................................... len:20 al:2 ......................CGCUCUUAAAAUCUCCcAGC................................................... len:20 al:1 ......................CGCUCUUAAAAUCUCCUAuCUAU................................................ len:23 al:1 ......................gGCUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:3 ......................CGCUCUUAAAAUCUCCUAGCUAUc............................................... len:24 al:60 ......................CGCUCUUAAAAUCUCCUg..................................................... len:18 al:2 ......................CGCUCUUAAAAUCUCCUAaC................................................... len:20 al:23 ......................CaCUCUUAAAAUCUCCUAGC................................................... len:20 al:7 ......................CGCUCUUAAAAUCUCCUAGCUcU................................................ len:23 al:8 ......................CGCUCUUAgAAUCUCCUAGCUAU................................................ len:23 al:4 ......................CuCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:3 ......................CGCcCUUAAAAUCUCCUAGCUA................................................. len:22 al:4 ......................CGCUCUUAAAAUCUCCUAGCUAUUa.............................................. len:25 al:47 ......................CGCUCUUAAAAUCUCCUAGuUAU................................................ len:23 al:12 ......................CGCUCUaAAAAUCUCCUAGCUAUU............................................... len:24 al:1 ......................CGCUCUUAAAAUCUCCcAGCUAUU............................................... len:24 al:1 ......................CGCUCUUAAAAUCUCCUAGCcA................................................. len:22 al:29 ......................gGCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:2 ......................CGCUCUUAAAAUCUCCg...................................................... len:17 al:27 ......................CGCUCUUAAAAUuUCCU...................................................... len:17 al:1 ......................aGCUCUUAAAAUCUCCUAGC................................................... len:20 al:2 ......................CGCUCUUAAAAUCUCCUA..................................................... len:18 al:99 ......................CGCUCUcAAAAUCUCCUAGC................................................... len:20 al:1 ......................CGCUCUUAgAAUCUCCUAGCUA................................................. len:22 al:4 ......................CGCUCUUAgAAUCUCCUAGCUAUU............................................... len:24 al:1 ......................CGCUCUUAAAAUCUCCUgGCUAU................................................ len:23 al:16 ......................CGCUCUUAAAAUCUCCaA..................................................... len:18 al:1 ......................CGCUCcUAAAAUCUCCUAGCUAU................................................ len:23 al:7 ......................CGCUCUUAAAAUCaCCU...................................................... len:17 al:1 ......................CGCUCaUAAAAUCUCCUAGCUAUU............................................... len:24 al:1 ......................CGCUCUUAAAAUCUCCUcGCUAU................................................ len:23 al:1 ......................CGCUCUUAAAAUCUCCUAGu................................................... len:20 al:90 ......................CGCUCUUAAAAcCUCCUAGCUAUU............................................... len:24 al:1 ......................CGaUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:1 ......................CGCUCUUAAAAUCUCCUAGuUAUU............................................... len:24 al:12 ......................CGCUCUUAAAAUCcCCUAGC................................................... len:20 al:2 ......................CGCaCUUAAAAUCUCCUAGCUA................................................. len:22 al:2 ......................CGCUCUUAAAAUCUCCUAGCg.................................................. len:21 al:36 ......................CGCUCUUAAAAUCUCCUAGaUAU................................................ len:23 al:1 ......................CGCUCUUAAAAUCUCCU...................................................... len:17 al:215 ......................CGCUCUUAAAAUCUCCUAaCUAU................................................ len:23 al:1 ......................CGCUCUUAAAAUCUCCUcG.................................................... len:19 al:14 ......................gGCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:4 ......................CGCUCUUgAAAUCUCCUAGC................................................... len:20 al:2 ......................CGCUCUUAAAAUCUCCUAGCU.................................................. len:21 al:256 ......................CGCUCUUAAAAUCUCCUAGCUc................................................. len:22 al:3 ......................CGCUCUUAAAAUCUCCa...................................................... len:17 al:98 ......................CGCUCUUAAAAcCUCCUAGCUAU................................................ len:23 al:5 ......................CGCUCUUAAAAUCUCCUAuCUA................................................. len:22 al:1 ......................CGCUCUUAAAAUCUCCUAGaU.................................................. len:21 al:1 ......................CGCUCUUAAAAUCUCCUcGC................................................... len:20 al:1 ......................CGCgCUUAAAAUCUCCUAGCUA................................................. len:22 al:1 ......................aGCUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:2 ......................CGCcCUUAAAAUCUCCUAGCUAU................................................ len:23 al:6 ......................CGCUCUUAAAAUCcCCUAGCUA................................................. len:22 al:2 ......................CaCUCUUAAAAUCUCCU...................................................... len:17 al:2 ......................CaCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:14 ......................CuCUCUUAAAAUCUCCUAG.................................................... len:19 al:1 ......................CGCUCUUAAAAUCcCCUAG.................................................... len:19 al:1 ......................aGCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:5 ......................CGCUCUUAAAAUCUCCUAa.................................................... len:19 al:17 ......................CGCUCUUAAAAUCUCCUuG.................................................... len:19 al:1 ......................uGCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:5 ......................CGCUCUUAAAgUCUCCUAGCUAU................................................ len:23 al:6 ......................CGCUCUUAAAgUCUCCUAGC................................................... len:20 al:2 ......................CGCUCUUAAAAUCUCCUAGCgAU................................................ len:23 al:2 ......................CGCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:1551 ......................CGCUgUUAAAAUCUCCUAGCUAUU............................................... len:24 al:1 ......................CGCUCUUAAAAcCUCCUAGCUA................................................. len:22 al:1 ......................CGCUuUUAAAAUCUCCU...................................................... len:17 al:1 ......................CGCUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:356 ......................CGCUCUUAAAAUCUCCUAGuU.................................................. len:21 al:2 ......................CGCUCUUAAgAUCUCCUAGCUAUU............................................... len:24 al:2 ......................CGCUCUUAgAAUCUCCUAGCU.................................................. len:21 al:1 ......................CGCUCUUAAAAUCUCuUAGCUAU................................................ len:23 al:3 ......................CaCUCUUAAAAUCUCCUAGCU.................................................. len:21 al:2 ......................CGCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:933 ......................CGCUCUUAAAAUCUCCUuGCU.................................................. len:21 al:1 ......................CGCUCUUAAAAUCUCCUAGCgA................................................. len:22 al:5 ......................CGCUCUUAAAAUCUCCUAGCUAa................................................ len:23 al:134 ......................CGCUCUUAAAAUCUCCUAGCUAg................................................ len:23 al:67 ......................CGCUCUUAAAAcCUCCUAG.................................................... len:19 al:1 ......................CGCUCUUAAAAUCUCaU...................................................... len:17 al:2 ......................CGCUCUUAAAAUCUCaUAGC................................................... len:20 al:1 ......................CGCUCUUAAAAUCcCCUAGCUAU................................................ len:23 al:7 ......................CGCUCUUAAAAUCgCCUAGCUAUU............................................... len:24 al:1 ......................CGCUCUUAAAAUCUCu....................................................... len:16 al:1 ......................CGCUCUUAAAAUCUCCUAGCc.................................................. len:21 al:57 ......................CGCUCUUAAAAUuUCCUAGCUAU................................................ len:23 al:1 ......................CGCUCUUAAgAUCUCCUAGCUAU................................................ len:23 al:9 ......................CGCUCUUAAAAUCUCCUAGCUAcU............................................... len:24 al:10 ......................aGCUCUUAAAAUCUCCUA..................................................... len:18 al:2 ......................CGCUCUUAAAAaCUCCUAGC................................................... len:20 al:1 ......................CGCUCUUAAAAUCUCCUAGCUuU................................................ len:23 al:24 ......................CGCUCUUAAAAUCUCCUAGuUA................................................. len:22 al:6 ......................CGCUCUUAAAgUCUCCU...................................................... len:17 al:1 ......................CGCUCUUgAAAUCUCCUAGCUAU................................................ len:23 al:1 ......................CGCUCUcAAAAUCUCCUAGCUAUU............................................... len:24 al:3 ......................CGCUCUUAuAAUCUCCUAGCUA................................................. len:22 al:1 ......................CGCUCUUuAAAUCUCCUAGCUAU................................................ len:23 al:1 ......................CGCUCUUAAAAUCcCCUA..................................................... len:18 al:1 ......................uGCUCUUAAAAUCUCCUA..................................................... len:18 al:1 ......................CGCUCUUAAAAUCUCCUuGCUA................................................. len:22 al:1 ......................aGCUCUUAAAAUCUCCUAGCU.................................................. len:21 al:1 ......................CGCaCUUAAAAUCUCCUAGCUAU................................................ len:23 al:1 ......................CGCUCUUAAAAcCUCCU...................................................... len:17 al:1 ......................CGCUCUUAAgAUCUCCUAGCU.................................................. len:21 al:2 ......................uGCUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:5 ......................CGCUCUUAAAAUCUCCUAGCUAUUc.............................................. len:25 al:4 ......................CGCUCUUAAAAUCUCCUAGCUAUUu.............................................. len:25 al:16 ......................CGCUCUUAAAAUCUCCc...................................................... len:17 al:61 ......................CGCUCUaAAAAUCUCCUAGCUAU................................................ len:23 al:1 ......................CGCUCUUAAAAUCUCCUAGCUAUUuA............................................. len:26 al:3 ......................CGCUCcUAAAAUCUCCUAG.................................................... len:19 al:1 ......................CGCUCUaAAAAUCUCCUAGCUA................................................. len:22 al:2 ......................CGCUCUUAAAAUCUCCUgGCUA................................................. len:22 al:9 ......................CGCUCUUAAAAUCUCCUAu.................................................... len:19 al:27 ......................CGCUCUUAAAAUCUCCUAGg................................................... len:20 al:4 ......................CGCUCaUAAAAUCUCCUAGCUAU................................................ len:23 al:1 ......................uGCUCUUAAAAUCUCCUAGCU.................................................. len:21 al:1 ......................CGCUCUUAAAAUCcCCU...................................................... len:17 al:1 ......................CGCUCUUAAAAUCUCCUAGCa.................................................. len:21 al:110 ......................CGCUCUUAAAAUCUaCUAGCUAU................................................ len:23 al:1 ......................CaCUCUUAAAAUCUCCUAGCUAUU............................................... len:24 al:4 ......................CGCUCcUAAAAUCUCCUAGCUA................................................. len:22 al:1 ......................CGCUCUUAAAAcCUCCUAGC................................................... len:20 al:1 ......................CGCcCUUAAAAUCUCCUAGCU.................................................. len:21 al:2 ......................CGCUCUUAAAAUCUCaUAGCUAU................................................ len:23 al:1 ......................CGCUCUUAAAAUCUCCUAGC................................................... len:20 al:565 ......................CGCUCUUAAAAUCUCCUAGCUAaU............................................... len:24 al:9 ......................CGCUCUUAAAAUCUCCUAGCUAc................................................ len:23 al:386 ......................uGCUCUUAAAAUCUCCUAGCUA................................................. len:22 al:8 ......................CGCUCUUAAAAUCUCCUAGCcAU................................................ len:23 al:2 ......................CcCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:1 ......................CGCUCUUAAAAUCUCCUu..................................................... len:18 al:1 ......................CGCUCUUAAAAUCUCCUgGCUAUU............................................... len:24 al:3 ......................CGCUCUUAAAAUCUCCUAGCUAUg............................................... len:24 al:5 ......................CGCUCUUAAAAUCUCCUAaCUAUU............................................... len:24 al:1 ......................CGCUCUUAAAAUCUCCUAGCUgU................................................ len:23 al:70 ......................CGCUCUUAAgAUCUCCUAGCUA................................................. len:22 al:10 ......................CGCUCUUAAAAUCUCCUAGCUAUa............................................... len:24 al:102 ......................CGCUCUUAAAAUCUCCcA..................................................... len:18 al:1 ......................CGCUCUUAAAAUCUCCUAGCUAgU............................................... len:24 al:16 ......................CGCUCUUAAAAUCUCCUAaCUA................................................. len:22 al:1 ......................aGCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:3 ......................CGCUCUUAAAAUCUCCUAG.................................................... len:19 al:89 ......................CGCUaUUAAAAUCUCCUAGCUAU................................................ len:23 al:1 ......................CGuUCUUAAAAUCUCCUAGCUA................................................. len:22 al:1 ......................CGuUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:4 ......................CGCUCUUAAAAUCUCCUgGC................................................... len:20 al:1 ......................CGCUCUUAAAAUCUCCUAGa................................................... len:20 al:55 ......................CGCUCUUAAAAUCUCCUAGCaA................................................. len:22 al:10 ......................CGCUCUUAAAAUCUCaUA..................................................... len:18 al:4 ......................CGCUCUUAAAAUCUCCcAGCUA................................................. len:22 al:1 ......................CGCUCUUgAAAUCUCCUAGCUAUU............................................... len:24 al:1 ......................CGCUCUUAAAAUCUaCUAGCUAUU............................................... len:24 al:1 ......................CGCUCUUAAAAUCUCCgAG.................................................... len:19 al:1 ......................CGCUCUUAAAAUCUCCUAGCUuUU............................................... len:24 al:2 ......................CGCUCUUAAAAUCUCC....................................................... len:16 al:6 ......................CaCUCUUAAAAUCUCCUAGCUAU................................................ len:23 al:17 ......................CGCUCUUAAAAUCUCCUAGCUg................................................. len:22 al:19 ......................CGCUCUUAAuAUCUCCUAGC................................................... len:20 al:1 ......................CGCUCUUAAAAUCUCCUAGCUAUUGu............................................. len:26 al:1 ......................CGCUCUUAAAAUCUuCUAGCUA................................................. len:22 al:1 ......................CGCUCUUAAAAUCUCCUAc.................................................... len:19 al:7 ......................CGCUCUUAAAAUCUCCaAGC................................................... len:20 al:2 ......................CGCUCUUAAAAUCUCCcAGCUAU................................................ len:23 al:2 ......................CGCUCUcAAAAUCUCCUAGCUAU................................................ len:23 al:1 .......................GCUCUUAAAAUCUCCU...................................................... len:16 al:2 .......................GCUCUUAAAAUCUCCUAGCa.................................................. len:20 al:2 .......................GCUCUUAAAAUCUCCUAGCUu................................................. len:21 al:1 .......................aCUCUUAAAAUCUCCUAGCU.................................................. len:20 al:1 .......................GCUCUUAAAAUCUCCUAa.................................................... len:18 al:1 .......................GCUCUUAAAAUCUCCUAGCcA................................................. len:21 al:5 .......................GCUCUUAAAAUCUCCUAGCg.................................................. len:20 al:5 .......................GCUCcUAAAAUCUCCUAGCU.................................................. len:20 al:1 .......................GCUCUUAAAAUCUCCUAGCUA................................................. len:21 al:23 .......................GCUCUUAAAAUCUCCUAGCUg................................................. len:21 al:1 .......................GCUCUUAAAAUCUCCUAGCUAa................................................ len:22 al:4 .......................GCUCUUAAAAUCUCCUAGCUAUU............................................... len:23 al:1 .......................GCUCUUAAAAUCUCCUAGC................................................... len:19 al:5 .......................GCUCUUAAAAUCUCCUAGCUAU................................................ len:22 al:15 .......................GCUCUUAAAAUCUCCUAGCUgU................................................ len:22 al:2 .......................GCUCUUAAAAUCUCCUAGCUAc................................................ len:22 al:5 .......................GCUCUUAAAAUCUCCUAGCUAg................................................ len:22 al:1 .......................GCUCUUAAAAUCUCCUAG.................................................... len:18 al:3 .......................aCUCUUAAAAUCUCCUAGCUAUU............................................... len:23 al:1 .......................GCUCUUAAAAUCUCCUAGCc.................................................. len:20 al:1 .......................GCUCUUAAAAUCUCCUAGCU.................................................. len:20 al:6 ........................CUCUUAAAAUCUCCUAGCUAUU............................................... len:22 al:1 ........................CUCUUAAAAUCUCCUAGCU.................................................. len:19 al:1 ........................CUCUUAAAAUCUCCUAGCUAc................................................ len:21 al:1 ........................CUCUUAAAAUCUCCUAGCUA................................................. len:20 al:3 ........................CUCUUAAAAUCUCCUAGCUg................................................. len:20 al:1 ........................CUCUUAAAAUCUCCUAGCUAUUa.............................................. len:23 al:1 ........................CUCUUAAAAUCUCCUAGCUgU................................................ len:21 al:1 .........................UCUUAAAAUCUCCUAGu................................................... len:17 al:1 .........................UCUUAAAAUCUCCUAGCUA................................................. len:19 al:1 .........................UCUUAAAAUCUCCUAGCUAU................................................ len:20 al:1 .........................UCUUAAAAUCUCCUAGCUAc................................................ len:20 al:1 ..........................CUUAAAAUCUCCUAGCUAUg............................................... len:20 al:1 ...........................UUAAAAUCUCCUAGCUAU................................................ len:18 al:2 ...........................UUAAAAUCUCCUAGCU.................................................. len:16 al:1 ...........................UUAAAAUCUCCUAGCUAUU............................................... len:19 al:1 ..................................................AGCUAGGAGGUUUUAAAAGAGG..................... len:22 al:1 ...................................................cCUAGGAGGUUUUAAAAGAGG..................... len:21 al:1 ...................................................GCUAGGAGGUUUUAAAAGAGGA.................... len:22 al:57 ...................................................GCUAGGAGGUUUUAAAAGAa...................... len:20 al:3 ...................................................GCUAGGAGGUUUUAAAAGAGu..................... len:21 al:2 ...................................................GCUAGGAGGUUUUAAAAGAG...................... len:20 al:6 ...................................................GCUAGGAGGUUUUAAAAGAGGAu................... len:23 al:31 ...................................................GCUAGGAGGUUUUAAAAGAGGg.................... len:22 al:5 ...................................................GCUAGGAGGUUUUgAAAGAGG..................... len:21 al:3 ...................................................GCUAGGAGGUUUUAAgAGAGGA.................... len:22 al:1 ...................................................GCUAGGAGGUUUUAAAAu........................ len:18 al:1 ...................................................GCUAGGAGGUUUUgAAAGAGGA.................... len:22 al:8 ...................................................GCUAGGAGGUUUUAAAAGAGGu.................... len:22 al:2 ...................................................GCUAGGAGGUUUUAAAAGAGGAGu.................. len:24 al:1 ...................................................GCUgGGAGGUUUUAAAAGAGGA.................... len:22 al:1 ...................................................GCUAGGAGGUUUUAAAAGAGGAc................... len:23 al:3 ...................................................GCUAGGAGGUUUUAAAAGAc...................... len:20 al:1 ...................................................GCUAGGAGGUUUUAAA.......................... len:16 al:2 ...................................................GCUAGGAGGUUUUgAAAGA....................... len:19 al:1 ...................................................GCUAGGAGGUUUUAAAAGAGa..................... len:21 al:4 ...................................................GCUAGGAGGUUUUAAAAG........................ len:18 al:6 ...................................................GCUAGGAGGUUUUAAAAGA....................... len:19 al:1 ...................................................GCUAGGAGGUUUUAAAAGAGGAa................... len:23 al:4 ...................................................GCUAGGAGGUUUUAAAAGAGGAuA.................. len:24 al:1 ...................................................GCUAGGAGGUUUUAAAAGAGG..................... len:21 al:6 ...................................................GCUAGGAGGcUUUAAAAGAGGA.................... len:22 al:1 ....................................................CUAGGAGGUUUUgAAAG........................ len:17 al:1 ....................................................CUAGGAGGUUUUAAAAGAGGAGA.................. len:23 al:6 ....................................................CUAGGAGGUUUUAAAAGAGGA.................... len:21 al:2 ....................................................CUAGGAGGUUUUgAAAGAGGA.................... len:21 al:1 .....................................................UAGGAGGUUUUAAgAGAGGA.................... len:20 al:1 .....................................................UAGGAGGUUUUAAAAGuGGA.................... len:20 al:1 .....................................................UAGGAGGUUUUAAAAGAGGAGu.................. len:22 al:1 .....................................................UAGGAGGUUUUgAAAGAGGA.................... len:20 al:4 .....................................................UAGGAGGUUUUAAAAGAGGg.................... len:20 al:3 .....................................................UAGGAGGUUUUgAAAGAGG..................... len:19 al:2 .....................................................UAGGAGGUUUUAAAAGgGG..................... len:19 al:1 .....................................................UAGGAGGUUUUAAAAGAGGAG................... len:21 al:1 .....................................................UAGGAGGUUUUAAAAGu....................... len:17 al:2 .....................................................UAGGAGGUUUUAAAAGAG...................... len:18 al:3 .....................................................UAGaAGGUUUUAAAAGAGG..................... len:19 al:1 .....................................................UAGGAGGUUUUAAgAGAGG..................... len:19 al:3 .....................................................UAGGAGGUUUUAAAAGAGGAuA.................. len:22 al:1 .....................................................UAGGAGGUUUUAAAAGAGGA.................... len:20 al:117 .....................................................UAGGAGGUUUUAAAAGAGGAu................... len:21 al:47 .....................................................UAGGAGGUUUUAAAAGAGG..................... len:19 al:24 .....................................................UAGGAGGUUUUAAAAG........................ len:16 al:6 .....................................................UgGGAGGUUUUAAAAGAGGA.................... len:20 al:1 .....................................................UAGGAGGUUUUAAAAGAGGc.................... len:20 al:3 .....................................................UAGGAGGUUUUAAAAGAu...................... len:18 al:1 .....................................................cAGGAGGUUUUAAAAGAGGA.................... len:20 al:4 .....................................................UAGGAGGUUUUAAAAGAGGAc................... len:21 al:10 .....................................................UAGGAGGUUUUAAAAGAGGAa................... len:21 al:4 .....................................................UAGGAGGUUUUAAAAGAGa..................... len:19 al:11 .....................................................UAGGAGGUUUUAAAAGAGGAGg.................. len:22 al:1 .....................................................aAGGAGGUUUUAAAAGAGGA.................... len:20 al:3 .....................................................UAGGAGGUUUUAAAAGA....................... len:17 al:9 .....................................................UAGGAGGUUUUAAAAGAa...................... len:18 al:1