Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000021:4351817-4351909 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_5735.ps
Locus Name: Cluster_5735
GAUUAUCAACCUGGAUAACUGGACUGAUAUUCACCAAGUGAUUAAUAUUUACUCAUUUGCUGAUUAUCAGACCAGUCACUAGGCAUCUAGCUC
.........(((((...(((((.((((((.(((.(((((((.(((...))).))))))).))).)))))).)))))..))))).......... (-30.20)
............GGcUAACUGGACUGA.................................................................. len:15 al:1
................AACUGGACcGAUAUUC............................................................. len:16 al:1
..................CUGGACUGAUAUUCACCAAGUGAUU.................................................. len:25 al:1
.....................GACUGgUAUUCACCAAGU...................................................... len:18 al:1
.....................GACUGAUAUUCACCAAGUGAUUA................................................. len:23 al:1
......................ACUGAUAUUCACCAAGUGAU................................................... len:20 al:2
......................cCUGAUAUUCACCAAGUG..................................................... len:18 al:1
......................ACUGAUAUUCACCAAGcG..................................................... len:18 al:1
......................ACUGAUAUUCACCAAGUGAUa.................................................. len:21 al:2
......................ACUGAUAUUCACCAAGUGAaU.................................................. len:21 al:1
......................ACUGgUAUUCACCAAGUGA.................................................... len:19 al:1
......................ACUGAUAUUCACCAAGUGAUUA................................................. len:22 al:10
......................ACaGAUAUUCACCAAGUG..................................................... len:18 al:1
......................ACUGAUAUUCACCAAG....................................................... len:16 al:1
......................ACUGAUAUcCACCAAGUG..................................................... len:18 al:2
......................ACUGAUAUUCACCAAGUGAcU.................................................. len:21 al:1
......................ACUGAUAUUCACCAAGUG..................................................... len:18 al:32
......................ACUGAUAUUCACCAAGUGg.................................................... len:19 al:2
......................ACaGAUAUUCACCAAGUGAUU.................................................. len:21 al:1
......................ACUGAUAUUCACCAAGUa..................................................... len:18 al:9
......................ACUGAUAcUCACCAAGUGA.................................................... len:19 al:1
......................ACUGAUAUUCACCAAGUGA.................................................... len:19 al:15
......................ACUGAUAUUCACCAAGUGAUc.................................................. len:21 al:6
......................ACUGAUAUUCACCAAGUGAUU.................................................. len:21 al:30
......................ACUuAUAUUCACCAAGUGA.................................................... len:19 al:1
......................ACUGAUAUUCACCAAGgG..................................................... len:18 al:1
.........................................UUAAUAUUUACUCAUUUGC................................. len:19 al:1
...................................................CUCAUUUGCUGAUUAUCAGACCg................... len:23 al:2
...................................................CUCAUUUGCUGAUUAUCAGACCc................... len:23 al:1
...................................................CUCAUUUGCUGAUUAUCAGACCAa.................. len:24 al:1
...................................................CUCAUUUGCUGAUUAUCAGACC.................... len:22 al:7
...................................................CUCAUUUGCUGAUUAUCAGACCAu.................. len:24 al:1
...................................................CUCAUUUGCUGAUUAUCAGACCA................... len:23 al:7
...................................................CUCAUUUGCUGAUUAUCAGACa.................... len:22 al:4
...................................................CUCAUUUGCUGAUUAUCAGACCAc.................. len:24 al:1
...................................................CUCAUUUGCUGAUUAUCAGgCC.................... len:22 al:2
...................................................CUCAUUUGCUGAUUAUCAGAC..................... len:21 al:1
...................................................CaCAUUUGCUGAUUAUCAGACC.................... len:22 al:1
....................................................UCAUUUGCUGAUUAUCAGACCAc.................. len:23 al:1