Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000018:6855499-6855592 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_5282.ps
Locus Name: Cluster_5282
AAAAAUAAAAACAUUGUAGAGCUCACCCAACAGUUUUAAUCUGAUUUAUUCGGAUUAAAAUUUGUUGGGUGUGCUUUACAUGUCUUGUAUACAG
..........((((.(((((((.(((((((((((((((((((((.....))))))))))).)))))))))).)))))))))))........... (-41.10)
..AAAUAAAAACAUUGUAGAGC........................................................................ len:20 al:1
...........CAUUGUAGAGCUCACCCAACAGUUU.......................................................... len:25 al:1
......................UCACCCAACAGUUUUAAUCUGAUUUAUa............................................ len:28 al:1
......................UCACCCAACAGUUUUAAUCUGAUc................................................ len:24 al:62
......................UCAaCCAACAGUUUUAAUCUGAUU................................................ len:24 al:2
......................UCACCCAACAGUUUUAgUC..................................................... len:19 al:1
......................UCAuCCAACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAuUUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGcUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGAUU................................................ len:24 al:364
......................aCACCCAACAGUUUUAAUCUGAUUU............................................... len:25 al:1
......................UCACCCAACAuUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUa................................................... len:21 al:12
......................UCACCCAACAGUUUUAAUCUGAUgU............................................... len:25 al:3
......................UCACCCAgCAGUUUUAAUCUGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAAUCUGAg................................................. len:23 al:30
......................UCACCCAACAGUUUUAAUCcGA.................................................. len:22 al:1
......................aCACCCAACAGUUUUAAUCUGAU................................................. len:23 al:9
......................UCACCCAACAGUUUUAAUCUGA.................................................. len:22 al:215
......................aCACCCAACAGUUUUAAUCUGAUU................................................ len:24 al:4
......................UCgCCCAACAGUUUUAAUCUGAUU................................................ len:24 al:2
......................UCACCCAACAGUUUUAAUCUGAUUc............................................... len:25 al:3
......................UCACCCAACAGUUUUAAUCa.................................................... len:20 al:2
......................UCACCCAACAGUUUUAAUCUGAc................................................. len:23 al:190
......................UCACCCAACAGUUUUAAUCUGuU................................................. len:23 al:3
......................UCACCCAACAGUUUUAAUCgG................................................... len:21 al:2
......................UCACCCAACAGUcUUAAUCUGA.................................................. len:22 al:3
......................UCACCCAACAGUUUUAAUCUGAUUaA.............................................. len:26 al:1
......................UCACCCAACAGUUUUAAUCUGc.................................................. len:22 al:1
......................UCgCCCAACAGUUUUAAUC..................................................... len:19 al:1
......................UCACCCAACAGUUUUAAUCUGAUUU............................................... len:25 al:56
......................UCACCCAACAGUUUUAu....................................................... len:17 al:1
......................UCACCCgACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAcCUGAU................................................. len:23 al:1
......................cCACCCAACAGUUUUAAUCUGAUUU............................................... len:25 al:1
......................UCACCCAACAGUUUUAAUCUGAUUUA.............................................. len:26 al:2
......................UCACCCAACAGUUUUAAUCUGAUUg............................................... len:25 al:2
......................UCACCCAACAGUUUUAAUCUGgUU................................................ len:24 al:3
......................UCACCCAACAGUUUUAAUa..................................................... len:19 al:1
......................UCACCCAACAGUUUUAAUCUGAaUU............................................... len:25 al:4
......................UCgCCCAACAGUUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGcUUUAAUCUGAUUU............................................... len:25 al:1
......................UCACCCAACAGUUUUAAU...................................................... len:18 al:2
......................UCACCCAACAGUUUUAAUCUcAU................................................. len:23 al:1
......................UCACCCAACgGUUUUAAUCUGAUUU............................................... len:25 al:1
......................UCACCCAACAGUUUUAAUuUGAUU................................................ len:24 al:7
......................UCACCCAACAGUUUU......................................................... len:15 al:4
......................UCACCCAACAGUUUUAAUCUG................................................... len:21 al:22
......................UCACCCAACAGUUcUAAUCUGAUUU............................................... len:25 al:1
......................UCACCCAACAGUUUUAuUCUGA.................................................. len:22 al:2
......................UCACCCAACAGUUUUAAUCUGAUUaAU............................................. len:27 al:1
......................UCACCCAACAGUUUUAAUCUGAUcU............................................... len:25 al:1
......................UCACCCAACAGUUUUAgUCUGAU................................................. len:23 al:3
......................cCACCCAACAGUUUUAAUCUGA.................................................. len:22 al:2
......................UCACCCgACAGUUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUUUAAUCUGAUa................................................ len:24 al:76
......................UgACCCAACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGAUg................................................ len:24 al:3
......................UCACCCAACAGUUUUAAUCgGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGAa................................................. len:23 al:56
......................UaACCCAACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACaCAACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUuUGAU................................................. len:23 al:3
......................UCACCCAACgGUUUUAAUCUGAU................................................. len:23 al:6
......................UCACCCcACAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGu.................................................. len:22 al:8
......................cCACCCAACAGUUUUAAUCUGAU................................................. len:23 al:12
......................UCACCCAACAGUUUUAAUCUGAcU................................................ len:24 al:7
......................UCACCCAACAGUUUUAAUCcGAUU................................................ len:24 al:4
......................UCAaCCAACAGUUUUAAUCUGAUUU............................................... len:25 al:1
......................UCACCuAACAGUUUUAAUCUGA.................................................. len:22 al:3
......................UuACCCAACAGUUUUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUUUAAUCcG................................................... len:21 al:1
......................cCACCCAACAGUUUUAAUCUGAUU................................................ len:24 al:10
......................UCACCCAACAGcUUUAAUC..................................................... len:19 al:1
......................UuACCCAACAGUUUUAAUCU.................................................... len:20 al:1
......................UCACCCAACAGUcUUAAUCUGAU................................................. len:23 al:1
......................aCACCCAACAGUUUUAAUCU.................................................... len:20 al:1
......................UCACCCAACAGUUUUAAUCUGgU................................................. len:23 al:51
......................UCACuCAACAGUUUUAAUCUGAU................................................. len:23 al:2
......................UuACCCAACAGUUUUAAUC..................................................... len:19 al:1
......................UCACCCAACAGUUUUAAUCUaAU................................................. len:23 al:2
......................UCACCCAACAGUUUUAAUCUGAUUa............................................... len:25 al:51
......................UCACCCAACAGUUUUgAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGAUaU............................................... len:25 al:2
......................UCACCCAACAGUgUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGAgU................................................ len:24 al:4
......................UCACCCAACAGUUUUAAUCU.................................................... len:20 al:5
......................UCACCCAgCAGUUUUAAUCUGA.................................................. len:22 al:4
......................UCACCCAACAGUUUUAAcC..................................................... len:19 al:1
......................cCACCCAACAGUUUUAAUC..................................................... len:19 al:2
......................UCACCCAACAGUUUUAgUCUGA.................................................. len:22 al:2
......................UuACCCAACAGUUUUAAUCUGAU................................................. len:23 al:4
......................UCACCCAACAGUUUUAAUCUGAaU................................................ len:24 al:11
......................UCACCCAACAGUUcUAAUCUGAU................................................. len:23 al:3
......................UCACCCAgCAGUUUUAAUCUGAU................................................. len:23 al:3
......................UCACCCAAuAGUUUUAAUCUGAU................................................. len:23 al:1
......................UCACCCAACAGUUUUAAUCUGg.................................................. len:22 al:9
......................UCACCCAACAGUUUUAAUCUGAU................................................. len:23 al:963
......................UCgCCCAACAGUUUUAAUCUGAU................................................. len:23 al:3
......................UCACCCAACAGUUcUAAUCUGA.................................................. len:22 al:1
......................UCACCCAACAGUUUUAAUCUGcU................................................. len:23 al:1
......................UCACCCAACAGUUUUAgUCUGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUgAUCUGAUU................................................ len:24 al:1
......................UCACCCAACAGUUUUAAUCUGAUUUAUU............................................ len:28 al:1
......................UCACCCAACAGUUUUAAUCUGAUUUu.............................................. len:26 al:2
......................UCACCCAACAGUUUUAAUC..................................................... len:19 al:97
.......................CACCCAACAGUUUUAAUCUGAUc................................................ len:23 al:1
.......................CACCCAACAGUUUUAAUCUGAa................................................. len:22 al:1
.......................CACCCAACAGUUUUAAUCUGA.................................................. len:21 al:3
.......................CACCCAACAGUUUUAAUCUGAUU................................................ len:23 al:6
.......................CACCCAACAGUUUUAgUCUGAU................................................. len:22 al:1
.......................CACCCAACAGUUUUAAUC..................................................... len:18 al:2
.......................CACCCAACAGUUUUAAUCUGAU................................................. len:22 al:3
........................................CUGAUUUAUUCGGAUUAAAAUUUGUUGGGU........................ len:30 al:1
..........................................GAUUUAUUCGGAUUAAAAUUUGUUGGGUGU...................... len:30 al:2
............................................UUUAUUCGGAUUAAAAUUUGUUGGGUGUGC.................... len:30 al:3
............................................UUUAUUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:30 al:20
............................................UUUAUUuGGAUUAAAAUUUGUUGGGUGU...................... len:28 al:2
............................................UUUAUUuGGAUUAAAAUUUGUUGG.......................... len:24 al:1
.............................................UUAUUuGGAUUAAAAUUUGUUGGGUG....................... len:26 al:1
.............................................UUAUUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:29 al:5
..............................................UAUUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:28 al:9
..............................................UAUUuGGAUUAAAAUUUGUUGGGU........................ len:24 al:3
..............................................UAUUuGGAUUAAAAUUUGUUGGG......................... len:23 al:3
..............................................UAUUuGGAUUAAAAUUUGUUGGGUGUGCU................... len:29 al:4
..............................................UAUUuGGAUUAAAAUUUGUUGGGUGUG..................... len:27 al:1
..............................................UAUUuGGAUUAAAAUUUGUUGG.......................... len:22 al:1
................................................UUuGGAUUAAAAUUUGUUGGGUGUG..................... len:25 al:1
................................................UUuGGAUUAAAAUUUGUUGGGUGUGC.................... len:26 al:16
................................................UUCGGAUUAAAAUUUGUUGGGUGUGCa................... len:27 al:3
................................................UUuGGAUUAAAAUUUGUUGGGUGUGCU................... len:27 al:6
.................................................UuGGAUUAAAAUUUGUUGGGUGUGCU................... len:26 al:3
.................................................UuGGAUUAAAAUUUGUUGGGUG....................... len:22 al:2
.................................................UuGGAUUAAAAUUUGUUGGGU........................ len:21 al:1
.................................................UuGGAUUAAAAUUUGUUGGGUGUG..................... len:24 al:5
.................................................UuGGAUUAAAAUUUGUUGGGUGUGC.................... len:25 al:23
.................................................UuGGAUUAAAAUUUGUUGGGUGU...................... len:23 al:2
..................................................uGGAUUAAAAUUUGUUG........................... len:17 al:1
..................................................uGGAUUAAAAUUUGUUGGGU........................ len:20 al:2
..................................................uGGAUUAAAAUUUGUUGGGUG....................... len:21 al:3
..................................................uGGAUUAAAAUUUGUUGGGUGUG..................... len:23 al:8
..................................................uGGAUUAAAAUUUGUUGGGUGUGCUUU................. len:27 al:1
..................................................uGGAUUAAAAUUUGUUGGGUGUGCU................... len:25 al:9
..................................................uGGAUUAAAAUUUGUUGGGUGUGC.................... len:24 al:145
..................................................uGGAUUAAAAUUUGUUGGGUGU...................... len:22 al:8
...................................................GGAcUAAAAUUUGUUGGGUGUGC.................... len:23 al:3
...................................................GGAUUAAAAUUUGUUGGGUaU...................... len:21 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUcC.................... len:23 al:6
...................................................aGAUUAAAAUUUGUUGGGUGU...................... len:21 al:1
...................................................GGAUUAAAAUUUGUUGGGUGaG..................... len:22 al:2
...................................................GGAUUAAAAUUUGcUGGGUGUGCU................... len:24 al:1
...................................................uGAUUAAAAUUUGUUGGGUGUGCU................... len:24 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCUg.................. len:25 al:3
...................................................GGAUUAAAAUUUGUUGGGUGgG..................... len:22 al:6
...................................................GGAgUAAAAUUUGUUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGaGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGgGCU................... len:24 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGgU................... len:24 al:1
...................................................aGAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:19
...................................................GGAUUAAAAUUUGUUGGGUGUuC.................... len:23 al:3
...................................................GGAUUAAAAUUUGUUGGGgG....................... len:20 al:3
...................................................uGAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:8
...................................................GGAUUAAAAUUUGUUGGGUGa...................... len:21 al:7
...................................................GGAUUAAAAUUUGUcGGGUGUGC.................... len:23 al:4
...................................................GGAUUAAAAUUUGUUGGGcG....................... len:20 al:2
...................................................GGAUUAAAAUUUGaUGGGUGUG..................... len:22 al:1
...................................................GGAUUcAAAUUUGUUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGaU................... len:24 al:3
...................................................GGAUUAAAAUUUGUUGGGUGaGC.................... len:23 al:3
...................................................GGAUUAAAAUUUGUUGGGUGUGCaUU................. len:26 al:7
...................................................GGAUUAAAAUUUGUUGGGUGUGCUUUu................ len:27 al:1
...................................................GGAUUAAAAUUUGUUGGGU........................ len:19 al:10
...................................................GGAUUAAAAUUUGUUGGGUGUGCUc.................. len:25 al:3
...................................................GGAUUAAAAUUUGUUGGGUGUG..................... len:22 al:65
...................................................GGAUUAgAAUUUGUUGGGUG....................... len:20 al:1
...................................................GGAUUAAAAUUUGUUGGu......................... len:18 al:1
...................................................aGAUUAAAAUUUGUUGGGUGUGCU................... len:24 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUu..................... len:22 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCg................... len:24 al:69
...................................................GGAUUAAAAUUUGUUGGcUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGU...................... len:21 al:38
...................................................GGAUUAAAAUUUGUUGGGUGUc..................... len:22 al:1
...................................................GGAUUAAAgUUUGUUGGGUGUGC.................... len:23 al:2
...................................................GGAUUAAAAUUUGUUGGGUG....................... len:20 al:14
...................................................GGAUUAAAAUUUGUUGGGUGcGC.................... len:23 al:7
...................................................GGAUaAAAAUUUGUUGGGUG....................... len:20 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGu.................... len:23 al:347
...................................................GGAUUAAAAUUUGUUGGuUGUGC.................... len:23 al:1
...................................................uGAUUAAAAUUUGUUGGGUG....................... len:20 al:1
...................................................GGAUUAAAAUUUGgUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUcUGUUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGg...................... len:21 al:5
...................................................uGAUUAAAAUUUGUUGGGU........................ len:19 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCc................... len:24 al:31
...................................................GGAUUAAAAUUUGUUGGGUGUGCaU.................. len:25 al:24
...................................................GGAUUAAAAUUUGUUGGGUGUGa.................... len:23 al:251
...................................................GGAUUAAAAUUUGcUGGGUGUGC.................... len:23 al:3
...................................................GGAUUAAAAUUUGUUGGGUGUGCUUc................. len:26 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUaC.................... len:23 al:51
...................................................GaAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUa....................... len:20 al:5
...................................................GGAUUAAAAUUUGUUGGGUGc...................... len:21 al:22
...................................................GGAUUAAAAUUUGUUGGGUGcG..................... len:22 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUGuU................... len:24 al:2
...................................................GGAUUAAAAUUUGUUGGa......................... len:18 al:1
...................................................GGAUUAAAAUUcGUUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCU................... len:24 al:107
...................................................GGAUUAAgAUUUGUUGGGUGUGC.................... len:23 al:3
...................................................GGAUUAAAAUUUGUUGGcU........................ len:19 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCa................... len:24 al:509
...................................................GGAUUAAAAUUUaUUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCUa.................. len:25 al:11
...................................................GGAUUAAAAUUUGUUGGGUGUGCUaU................. len:26 al:2
...................................................GGAUUAAAAUUUGUUGGGc........................ len:19 al:5
...................................................GGAUUAAAAUUUGUUGGGUGUa..................... len:22 al:30
...................................................GGAUUAcAAUUUGUUGGGUGUGC.................... len:23 al:1
...................................................GGgUUAAAAUUUGUUGGGUGUGC.................... len:23 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:1218
...................................................GGAUUAAAAUUUGUUaGGUGUGC.................... len:23 al:2
...................................................GGAUUAAAAUUUGUUGGGUGUGCUUa................. len:26 al:4
...................................................GGAUUAAAAUUUGUUGGGUGUGg.................... len:23 al:26
...................................................GGAUUgAAAUUUGUUGGGUGUGC.................... len:23 al:2
...................................................GuAUUAAAAUUUGUUGGGUGUGC.................... len:23 al:1
...................................................GGAUUAAAgUUUGUUGGGUGUGCU................... len:24 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCUU.................. len:25 al:8
...................................................GGAUUAAuAUUUGUUGGGUGUGCU................... len:24 al:1
...................................................GGAUUAAAAcUUGUUGGGUGUGC.................... len:23 al:2
...................................................GGAUUAAAAUUUGUUGGaUGUGC.................... len:23 al:1
...................................................GGAUUAAAAUUUGUUGGGUGUGCUUU................. len:26 al:4
....................................................GAUUAAAAUUUGUUGGGUGUGCc................... len:23 al:1
....................................................GAUUAAAAUUUGUUGGGUGUGCa................... len:23 al:3
....................................................GAUUAAAAUUUGUUGGGUGUGCU................... len:23 al:3
....................................................GAUUAAAAUUUGUUGGGUGUGC.................... len:22 al:12
.....................................................AUUAAAAUUUGUUGGGUGUGCg................... len:22 al:4
.....................................................AUUAAAAUUUGUUGGGcGUGC.................... len:21 al:1
.....................................................AUUAAAAUUUGUUGGGUGUGCU................... len:22 al:6
.....................................................AUUAAAAUUUGUUGGGUGUaC.................... len:21 al:3
.....................................................AUUAAAAUUUGUUGGGUGU...................... len:19 al:4
.....................................................AUUAAAAUUUGUUGGGUGUGCaU.................. len:23 al:1
.....................................................AUUAAAAUUUGUUGGGUGUGCaUU................. len:24 al:1
.....................................................AUUAAAAUUUGUUGGGUGUGa.................... len:21 al:8
.....................................................AUUAAAAUUUGUUGGGUGUGCa................... len:22 al:22
.....................................................AUUAAAAUUUGUUGGGUGUGu.................... len:21 al:21
.....................................................AUUAAAAUUUGUUGGGUGUG..................... len:20 al:1
.....................................................AUUAAAAUUUGUUGGGUGUGC.................... len:21 al:85
.....................................................AUUAAAAUUUGUUGGGUGUa..................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGUGC.................... len:20 al:298
......................................................UUAAAAUUUGUUGGGUGUGCaUU................. len:23 al:1
......................................................UUAAAAUUUGUUGGGUGUGCUU.................. len:22 al:2
......................................................UUAAAAUUUGUUGGGUGUuC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGa...................... len:18 al:3
......................................................UUAAAAUUUGUUGGuUGUGC.................... len:20 al:1
......................................................UUAgAAUUUGUUGGGUGU...................... len:18 al:1
......................................................UUAAgAUUUGUUGGGUGUGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGUG..................... len:19 al:2
......................................................UUAAAAUUUGUUGGGUGcGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGaGUG..................... len:19 al:1
......................................................UUAgAAUUUGUUGGGUGUGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGcGUGC.................... len:20 al:1
......................................................cUAAAAUUUGUUGGGUGUGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGUGa.................... len:20 al:58
......................................................UUAAAAUUUGUUGGGUGUcC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGg...................... len:18 al:2
......................................................UUAAAAUUUGUUGGGUGUaC.................... len:20 al:8
......................................................UUAAAAUUUGUUGGGUGUGCU................... len:21 al:29
......................................................UUAAAAUUUGUUGGGUGUGCg................... len:21 al:30
......................................................UUAAAAUUUGUcGGGUGUGCU................... len:21 al:1
......................................................UUAAAAUUUGUUGGGUGgGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGU...................... len:18 al:10
......................................................UUAAAAUUUGUUGGGUGUGCUUU................. len:23 al:2
......................................................UUAAAAUUUGUUGGGUGUGu.................... len:20 al:85
......................................................UaAAAAUUUGUUGGGUGUGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGaGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUG....................... len:17 al:1
......................................................UUgAAAUUUGUUGGGUGUGC.................... len:20 al:2
......................................................UUAAAAUUUGUUGGGUGUa..................... len:19 al:2
......................................................UUAAAAUUUGUUGGGUGUGg.................... len:20 al:13
......................................................UUAAAAUUUGUUGGGUGUGCUa.................. len:22 al:2
......................................................UUAAAAUUcGUUGGGUGUGC.................... len:20 al:1
......................................................UUAAAAUUUGUUGGGUGUGCa................... len:21 al:215
......................................................UUAAAAUUUGUUGGGUGUGCaU.................. len:22 al:8
......................................................UUAAAAUUUGUUGGGU........................ len:16 al:2
......................................................UUAAAAUUUGUUGGGUGUGCc................... len:21 al:3
......................................................UUAAAAUUUGUUGGGUGc...................... len:18 al:5
.......................................................UAAAAUUUGUUGGGUGUGCa................... len:20 al:17
.......................................................UAAAAUUUGUUGGGUGgGCU................... len:20 al:1
.......................................................UAAAAUUUGUUGGGUGUGCg................... len:20 al:6
.......................................................UAAAAUUUGUUGGGUGUGC.................... len:19 al:1
.......................................................UAAAAUUUGUUGGGUGUGu.................... len:19 al:2
.......................................................UAAAAUUUGUUGGGUGUGCU................... len:20 al:10
.......................................................UAAAAUUUGUUGGGUGUGa.................... len:19 al:1
.......................................................UAAAAUUUGUUGGGUGUGaU................... len:20 al:1
.......................................................UAAAAUUUGUUGGGUGUGCc................... len:20 al:3
.......................................................UAAAAUUUGUUGGGUGU...................... len:17 al:1
........................................................AAAAUUUGUUGGGUGUG..................... len:17 al:1
........................................................AAAAUUUGUUGGGUGUGCa................... len:19 al:4
........................................................AAAAUUUGUUGGGUGUGCUUU................. len:21 al:1
........................................................AAAAUUUGUUGGGUGUGC.................... len:18 al:1
........................................................AAAAUUUGUUGGGUGUGCaUU................. len:21 al:1
.........................................................AAuUUUGUUGGGUGUGCU................... len:18 al:2
.........................................................AAAUUUGUUGGGUGUGC.................... len:17 al:1
.........................................................AAAUUUGUUGGGUGUGCU................... len:18 al:1
...................................................................GGUGUGCUUUAgAUG............ len:15 al:2