Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam Location: Pocillopora_meandrina_HIv1___Sc0000016:7555639-7555733 plus Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_4880.ps Locus Name: Cluster_4880 GAGAAAUUUUGUCUGGCAUAUGGUGGGCUGUUGGAACUUGUAUUUUUAUGAUAUCAGUCCCACCAGCUCACCAAUAUGCUAGAUGAUAUUAUGCA ....(((.((((((((((((((((((((((.(((.(((.(((((.....))))).))).))).))))))))).))))))))))))).)))..... (-42.80) .AcAAAUUUUGUCUGGCAUAU.......................................................................... len:20 al:3 ..cAAAUUUUGUCUGGCAUAU.......................................................................... len:19 al:1 ..cAAAUUUUGUCUGGCAU............................................................................ len:17 al:2 ....................UGGUGGGCUGUUuGAACUUGU...................................................... len:21 al:32 ....................UGGUGGGCUGUUuGAA........................................................... len:16 al:1 ....................UGGUGGGCUGUUuGAACUU........................................................ len:19 al:3 ....................UGGUGGGCUGUUuGAACUUGUA..................................................... len:22 al:81 ....................UGGUGGGCUGUUuGAACUUG....................................................... len:20 al:2 ....................UGGUGGGCUGUUuGAACUUGUAU.................................................... len:23 al:5 ....................UGGUGGGCUGUUuGAACUUGUAUU................................................... len:24 al:1 .....................GGUGGGCUGUUuGAACUUGUAUU................................................... len:23 al:10 .....................GGUGGGCUGUUGaAACUUGUA..................................................... len:21 al:1 .....................aGUGGGCUGUUGGAACUUGU...................................................... len:20 al:5 .....................GGUGGGCUGUaGGAACUUGUAU.................................................... len:22 al:1 .....................GGUGGGCUGUUGGAACUUGUu..................................................... len:21 al:8 .....................GGUGGGCUGUUGGAA........................................................... len:15 al:2 .....................GGUGGGCUGUUGGAACUUGg...................................................... len:20 al:23 .....................GGUGGGCUGUUGGAACUUGUAc.................................................... len:22 al:3 .....................GGUGGGCUGUUGGAACUUGgA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAACUUGa...................................................... len:20 al:15 .....................GGUGGGCUGUUGGAuCUU........................................................ len:18 al:26 .....................GGcGGGCUGUUGGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAACU......................................................... len:17 al:6 .....................GGUGGGCUGUUGGAc........................................................... len:15 al:3 .....................GGUGGGCUGUUGGAAC.......................................................... len:16 al:1 .....................GGUGGGCUGUUGGAACUgG....................................................... len:19 al:1 .....................GGUGGGCUGUUGGAAuUUGU...................................................... len:20 al:5 .....................GGUGGGCUGUUGGAgCUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAACg......................................................... len:17 al:1 .....................aGUGGGCUGUUGGAACU......................................................... len:17 al:1 .....................GGUGGGCcGUUGGAACUUGU...................................................... len:20 al:1 .....................GaUGGGCUGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUcGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUuGAACUUGUAUUUUUAUG............................................. len:29 al:1 .....................GGUGGGuUGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUcGAACUUGUA..................................................... len:21 al:6 .....................GGUGGGCUGUUaGAACUUGU...................................................... len:20 al:2 .....................GGUGGGCUGUUGGAACUUGUAg.................................................... len:22 al:3 .....................GGUGGGCUGUUaGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUuGAACUUGUAUUU.................................................. len:24 al:4 .....................GGUGGGCUGUUGGAACUcGUA..................................................... len:21 al:1 .....................uGUGGGCUGUUGGAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAACUUGUAUaU.................................................. len:24 al:7 .....................GGUGGGCUGUUGGAACUUGc...................................................... len:20 al:49 .....................GGUGGuCUGUUGGAACUUGUAU.................................................... len:22 al:1 .....................GGUGGGCUGUUuGAACUU........................................................ len:18 al:36 .....................GGUGGGCUGUUGGAACUUa....................................................... len:19 al:4 .....................GGUGGGCUGUUGGAACUUcU...................................................... len:20 al:1 .....................GGUGGaCUGUUGGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAACUUc....................................................... len:19 al:1 .....................GGUGGGCUGUUGGAACUUuU...................................................... len:20 al:2 .....................GGUGGGCUGUUGGAAaUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACUUG....................................................... len:19 al:7 .....................GGUGGGCUGUUGGAuCUUGUAUUUUUAUGAU........................................... len:31 al:1 .....................GGUGGGCUGUUuGAACUUG....................................................... len:19 al:15 .....................GGUGGGCUGUUuGAACUUGUAUUUU................................................. len:25 al:1 .....................GGUGGGCUGUUGGAuCUUGUAUUU.................................................. len:24 al:3 .....................GGUGGGCUGUUGGAACUUGUAa.................................................... len:22 al:20 .....................GGUGGGCUGUUGGAACUcGU...................................................... len:20 al:4 .....................GGUGGGCUGUUuGAAC.......................................................... len:16 al:4 .....................GGUGGGCUGUUGGAAuUUGUA..................................................... len:21 al:3 .....................GGUGGGCUGUcGGAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAACUc........................................................ len:18 al:5 .....................GGUGGGCUGUUGGAACUUGcA..................................................... len:21 al:10 .....................GGUGGGCUGUUGGAuCUUGU...................................................... len:20 al:1188 .....................GGUGGGCUGUUGGAACUa........................................................ len:18 al:4 .....................GGUGGGCUGUUGGAACcUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAcCUUGUA..................................................... len:21 al:3 .....................GGUGGGCUGUUGGAACaUGUA..................................................... len:21 al:1 .....................GGUGGuCUGUUGGAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUuGAACUUGUAU.................................................... len:22 al:86 .....................GGUGGGCUGUUuGAACUUGU...................................................... len:20 al:474 .....................GGUGGGCUGUUGuAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAgCUUGU...................................................... len:20 al:2 .....................GGUaGGCUGUUGGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAuCUUGUAUU................................................... len:23 al:6 .....................uGUGGGCUGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACUUGUAgU................................................... len:23 al:1 .....................GGUGGGCUGUUGGAACUgGU...................................................... len:20 al:1 .....................GGUGGGCUaUUGGAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAACUUGUAUa................................................... len:23 al:3 .....................GGUGGGCUGUUGGAcCUUGU...................................................... len:20 al:2 .....................GGUGGGCUGUUGGAuCUUG....................................................... len:19 al:25 .....................GGUGGGCUGUUuGAACU......................................................... len:17 al:17 .....................GGUGGGCUGUUGGgACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACUUaU...................................................... len:20 al:3 .....................GGUGGGCUGUUGGAACUUGUAUU................................................... len:23 al:3 .....................GGUGGGCUGUUGGgACUUGUA..................................................... len:21 al:3 .....................GGUGGGCUGUUGGAuCU......................................................... len:17 al:7 .....................GGUGGGCUGUUGGAACUU........................................................ len:18 al:10 .....................GGUGGGCUGUUGGAACUUGUAU.................................................... len:22 al:25 .....................GGUGGGCUGUUGcAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAuCUUGUAU.................................................... len:22 al:81 .....................GGUGGGCUGcUGGAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAu........................................................... len:15 al:6 .....................GGUGaGCUGUUGGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCgGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACUUGUAaUU.................................................. len:24 al:1 .....................GGUGGGCUGUUGGAACc......................................................... len:17 al:2 .....................cGUGGGCUGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACUUGUAaU................................................... len:23 al:5 .....................GGUGGGCUGUUGGAACUUGU...................................................... len:20 al:300 .....................GGUGGGCUGUUGGAACUUGUA..................................................... len:21 al:937 .....................GGUGGGCUGUUuGAACUUGUA..................................................... len:21 al:1631 .....................GGUGGGCUGUUcGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACgU........................................................ len:18 al:1 .....................aGUGGGCUGUUGGAACUUGUA..................................................... len:21 al:19 .....................GGUGGGCUGUUGGAuCUUGUA..................................................... len:21 al:462 .....................GGUGGGCUGgUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACUUGUg..................................................... len:21 al:29 .....................GGUGGGCUGUUGGAuC.......................................................... len:16 al:9 ......................GUGGGCUGUUGGAuCUUGUAU.................................................... len:21 al:1 ......................GUGGGCUGUUGGAACUUGU...................................................... len:19 al:5 ......................GUGGGCUGUUuGAACUUGU...................................................... len:19 al:2 ......................GUGGGCUGUUGGAuCUUGU...................................................... len:19 al:5 ......................GUGGGCUGUUuGAACUUGUA..................................................... len:20 al:1 .......................UGGGCUGUUGGAACUUGUA..................................................... len:19 al:1 .......................UGGGCUGUUuGAACUUGUA..................................................... len:19 al:1 .......................UGGGCUGUUuGAACUUGUAUUUUUAUGAUA.......................................... len:30 al:1 .......................UGGGCUGUUGGAuCUUGUA..................................................... len:19 al:1 .......................UGGGCUGUUuGAACUUGUAUU................................................... len:21 al:1 .......................UGGGCUGUUuGAACUUGU...................................................... len:18 al:1 .......................UGGGCUGUUGGAACUUGUAU.................................................... len:20 al:2 .......................UGGGCUGUUGGAACUUGU...................................................... len:18 al:1 .......................UGGGCUGUUuGAACUUGUAU.................................................... len:20 al:1 .......................UGGGCUGUUGGAACUUGUAUc................................................... len:21 al:1 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACCA...................... len:31 al:21 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACC....................... len:30 al:1 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACCg...................... len:31 al:10 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACCc...................... len:31 al:1 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACa....................... len:30 al:2 ...........................................UUUUAUGAUAUCAGUCCCACCAGCUCACCg...................... len:30 al:1 ..............................................UAUGAUAUCAGUCCCACCAGCUCACCA...................... len:27 al:1 ...................................................UAUCAGUCCCACCAGCUCACCA...................... len:22 al:3 ...................................................UAUCAGUCCCACCAGCUCACC....................... len:21 al:3 ...................................................UAUCAGUCCCACCAGCUC.......................... len:18 al:1 ...................................................aAUCAGUCCCACCAGCUCACCA...................... len:22 al:1 ....................................................AUCAGUCCCACCAGCUCACCAAc.................... len:23 al:2 ....................................................AUCAGUCCCACCAGCUCACCAAUc................... len:24 al:2 ....................................................cUCAGUCCCACCAGCUCACCAAU.................... len:23 al:2 ....................................................cUCAGUCCCACCAGCUCACCA...................... len:21 al:1 ....................................................AUCAGUCCCACCAGCUCACCA...................... len:21 al:1 ....................................................AUCAGUCCCACCAGCUCACCAAUu................... len:24 al:10 ....................................................AUCAGUCCCACCAGCUCACCAAU.................... len:23 al:6 ....................................................AUCAGUCCCACCAGCUCACCAgU.................... len:23 al:1 ....................................................AUCAGUCCCACCAGCg........................... len:16 al:1 .....................................................UCAGUgCCACCAGCUCACCAAUA................... len:23 al:1 .....................................................UCAuUCCCACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUCAuCAAU.................... len:22 al:6 .....................................................UaAGUCCCACCAGCUCACCAAU.................... len:22 al:1 .....................................................cCAGUCCCACCAGCUCACCA...................... len:20 al:9 .....................................................UCAGUaCCACCAGCUCACCAAU.................... len:22 al:6 .....................................................UCAGUCCCACCAGCUCA......................... len:17 al:17 .....................................................UCAGUCCCACCAGCcCACCAAU.................... len:22 al:18 .....................................................UCAGcCCCACCAGCU........................... len:15 al:1 .....................................................UCAGUCCCACCAGCUCAgCAAU.................... len:22 al:2 .....................................................UCAGUCuCACCAGCUCACCAAU.................... len:22 al:3 .....................................................UCAGUCCCACCAGCUCACCAAc.................... len:22 al:659 .....................................................cCAGUCCCACCAGCUCACCAAUA................... len:23 al:2 .....................................................UCAGUCCCACCAGCUCACCAAaA................... len:23 al:2 .....................................................UCAGUCCCACCAGCUuACCAAU.................... len:22 al:4 .....................................................UCgGUCCCACCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCgGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCAGCUCACCgAUA................... len:23 al:1 .....................................................UCAGUCCCACCAGCUCACCAAg.................... len:22 al:87 .....................................................cCAGUCCCACCAGCUCACCAA..................... len:21 al:5 .....................................................UCAGUCCCgCCAGCUCACCAAU.................... len:22 al:10 .....................................................UgAGUCCCACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCgCCAGCUCACCAAUA................... len:23 al:1 .....................................................UCAGUCCaACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUCACu....................... len:19 al:26 .....................................................UCAGUCCCACCAGCa........................... len:15 al:8 .....................................................UCAGUCCCACCgGCU........................... len:15 al:1 .....................................................UCAGUCCuACCAGCUCACC....................... len:19 al:1 .....................................................UgAGUCCCACCAGCUCACC....................... len:19 al:1 .....................................................UCAGUCCCACCAcCUCACC....................... len:19 al:6 .....................................................UCAGUCCCACCAGCUCACCgAU.................... len:22 al:6 .....................................................UCAGUCCCACCAGCUCgCCAAUA................... len:23 al:1 .....................................................UCAGUCCCACCAGCUCACCAg..................... len:21 al:13 .....................................................UCAGUCCCACCuGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCACCAGCUCACCAcUA................... len:23 al:1 .....................................................UCAGUCCCACgAGCUCACCAAUA................... len:23 al:1 .....................................................UCAGUCCCACCAGCUCACa....................... len:19 al:45 .....................................................UCAGUCCCACCAGCUCAg........................ len:18 al:1 .....................................................UCAGUaCCACCAGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCuCCAGCUCACCAAU.................... len:22 al:1 .....................................................gCAGUCCCACCAGCUCACC....................... len:19 al:1 .....................................................UCAGUCCCACCAGCUCACCcAU.................... len:22 al:5 .....................................................UCAGUCCCACCAGCcCACCAA..................... len:21 al:1 .....................................................gCAGUCCCACCAGCUCACCAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCUCACCAu..................... len:21 al:16 .....................................................UCAGcCCCACCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACuAGCUCACCAAU.................... len:22 al:3 .....................................................UCAGaCCCACCAGCUCACCAAUA................... len:23 al:1 .....................................................UCAGUCCCACCAGCaCACCA...................... len:20 al:2 .....................................................UCAGUCCCACCgGCUCACCA...................... len:20 al:2 .....................................................UCAGUCCCgCCAGCUC.......................... len:16 al:2 .....................................................UCAGUCCCACCAGCUCACCAuUA................... len:23 al:3 .....................................................cCAGUCCCACCAGCUCACC....................... len:19 al:3 .....................................................UCAGUCCCACCAGCU........................... len:15 al:19 .....................................................UCAGUCCCACCAGCUCACgAA..................... len:21 al:1 .....................................................UCgGUCCCACCAGCUCACCA...................... len:20 al:2 .....................................................UCAGUCCCACCAGCg........................... len:15 al:2 .....................................................UCAGUCCCACCAGCUCgCCA...................... len:20 al:1 .....................................................UCAGUCCCACCAaCUCACCAAUA................... len:23 al:1 .....................................................UCAGUCCCACCAGCUCAC........................ len:18 al:9 .....................................................UCAGUCCCACCAGCUCACCAAUuU.................. len:24 al:33 .....................................................UCAGUCCCACCAcCUCACCAAUA................... len:23 al:5 .....................................................UCAGUCCCACCAGCUCACuAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCUCACCgA..................... len:21 al:2 .....................................................UCAGUCCCACCAGCUCACCAAUu................... len:23 al:2338 .....................................................UCAGUCCCACCAGCUCAaCAAU.................... len:22 al:2 .....................................................UuAGUCCCACCAGCUCACCAAU.................... len:22 al:7 .....................................................cCAGUCCCACCAGCUCAC........................ len:18 al:1 .....................................................aCAGUCCCACCAGCUCACCA...................... len:20 al:6 .....................................................UCAGUgCCACCAGCUCACCAAU.................... len:22 al:3 .....................................................UCAGUCCCACCAGCUCACuA...................... len:20 al:4 .....................................................UCAGUCCCgCCAGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCACCAaCUCACCAA..................... len:21 al:2 .....................................................UCAGUCCCACCAGCUCACCAAU.................... len:22 al:3732 .....................................................UCAGUCCCACCAGCUCACC....................... len:19 al:154 .....................................................UCAGUCCCACCAGCUCAuCAA..................... len:21 al:1 .....................................................UCAGUCuCACCAGCUCACCA...................... len:20 al:1 .....................................................UCAGcCCCACCAGCUCACCAAU.................... len:22 al:9 .....................................................UCAGUCCCACCAGCUCACCAAUc................... len:23 al:390 .....................................................UCcGUCCCACCAGCUCACCAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCaCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUCACgA...................... len:20 al:1 .....................................................UCAGUCCCACCAGCUCACCAAcA................... len:23 al:2 .....................................................UCAGUCCCACCAcCUCACCAA..................... len:21 al:7 .....................................................aCAGUCCCACCAGCUCACCAA..................... len:21 al:2 .....................................................aCAGUCCCACCAGCUCACCAAU.................... len:22 al:23 .....................................................UCAGUaCCACCAGCUCACCAA..................... len:21 al:1 .....................................................cCAGUCCCACCAGCUCACCAAU.................... len:22 al:45 .....................................................UCuGUCCCACCAGCUCACCAAU.................... len:22 al:1 .....................................................aCAGUCCCACCAGCUCACC....................... len:19 al:2 .....................................................UCAGUCCCACCAGCUCACCuAU.................... len:22 al:29 .....................................................UCAGUCCCACCAGCUCACCc...................... len:20 al:4 .....................................................UCAGUCCCACCAGCUCACCAgU.................... len:22 al:126 .....................................................UCAGUCCCACCAGCUCACCg...................... len:20 al:90 .....................................................UCAGUCCCACCAGCUaACCAAU.................... len:22 al:3 .....................................................UCAGUCCCAuCAGCUCACCAAU.................... len:22 al:4 .....................................................cCAGUCCCACCAGCUC.......................... len:16 al:1 .....................................................UCAGaCCCACCAGCUCACCAAU.................... len:22 al:5 .....................................................UCAGUCCCACCAGCUCACCAAa.................... len:22 al:163 .....................................................UCAGUCCCACCAGuUCACCA...................... len:20 al:1 .....................................................UCAGUCCCACCAGuUCACCAAUA................... len:23 al:1 .....................................................UCAGUgCCACCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCAGCUCACCAA..................... len:21 al:330 .....................................................UCAuUCCCACCAGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCcCCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUCACCAAUg................... len:23 al:24 .....................................................UCAGUCCCACCAGCUC.......................... len:16 al:16 .....................................................UCAGUCCCACCAGCUCACCu...................... len:20 al:5 .....................................................UCAGUCCCACCAGuUCACCAAU.................... len:22 al:9 .....................................................UCAGUCCCACCAGCcCACCA...................... len:20 al:3 .....................................................UCAGUCCCACCAGCUCACCA...................... len:20 al:675 .....................................................UCAGUCCuACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUCACaAAU.................... len:22 al:5 .....................................................UCcGUCCCACCAGCUCACC....................... len:19 al:4 .....................................................UCAGUCCCACCAGCUCACCAc..................... len:21 al:3 .....................................................UCAGUCCCACCAcCUCACCAAU.................... len:22 al:94 .....................................................UCAGUCaCACCAGCUCACCAAU.................... len:22 al:1 .....................................................UaAGUCCCACCAGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCACCAGCUCACCAAgA................... len:23 al:1 .....................................................UCAGUCCCgCCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGcCCCACCAGCUCACC....................... len:19 al:1 .....................................................UCAGUCCCACCAGCUCACgAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCUCg......................... len:17 al:2 .....................................................UCAGUCCCACCAGCUCACCAuU.................... len:22 al:5 .....................................................UCAGUCCCACCAGCUCACCAAUA................... len:23 al:167 .....................................................UCgGUCCCACCAGCUCACCAAU.................... len:22 al:15 .....................................................UCAGUCCCACCuGCUCACCAAU.................... len:22 al:4 .....................................................UCAGUCCCACCAGCUCu......................... len:17 al:1 .....................................................UCAGUCCCACCAGCUCACg....................... len:19 al:4 .....................................................UCAGUCCCACCAaCUCACCA...................... len:20 al:4 .....................................................UCAGUCCCACCAGCUCAu........................ len:18 al:2 .....................................................UCAGcCCCACCAGCUCACCA...................... len:20 al:3 .....................................................UCAGUCCCACCAaCUCACCAAU.................... len:22 al:15 .....................................................UCAGUCCCACCAGCUCAa........................ len:18 al:1 .....................................................UCAGUCCaACCAGCUCACCA...................... len:20 al:3 .....................................................UCAGUCCCACCAGCUCgCCAA..................... len:21 al:2 .....................................................UCAGUCCCACCAGCUCACaA...................... len:20 al:5 .....................................................UCAGcCCCACCAGCUC.......................... len:16 al:1 .....................................................UCAGUCCCACCAcCUCACCA...................... len:20 al:9 .....................................................UCAaUCCCACCAGCUCACCAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCUCAgC....................... len:19 al:1 .....................................................UCAGUCCCACCAGCUCgCCAAU.................... len:22 al:14 .....................................................UCAGUCCuACCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCgGCUCACC....................... len:19 al:1 .....................................................UCAGUaCCACCAGCUCACCAAUA................... len:23 al:5 .....................................................UCAGUCCCACCgGCUCACCAAU.................... len:22 al:2 .....................................................UuAGUCCCACCAGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCACCAGCUCACCAcU.................... len:22 al:40 ......................................................CAGUCCCACCAGCUCACCAAUA................... len:22 al:3 ......................................................CAGUCCCACCAGuUCACCAA..................... len:20 al:1 ......................................................uAGUCCCACCAGCUCACCAAU.................... len:21 al:1 ......................................................CAGUCCCACCAGCUCACCAA..................... len:20 al:2 ......................................................CAGUCCCACCAcCUCACCAAU.................... len:21 al:1 ......................................................CAGUCCCACCAGCUCACCAAU.................... len:21 al:20 ......................................................CAGcCCCACCAGCUCACCAAU.................... len:21 al:1 ......................................................CAGUCCCuCCAGCUCACCAAU.................... len:21 al:1 ......................................................CAGUCCCACCAGCUCACCAAUu................... len:22 al:5 ......................................................CAGUCCCACCAGCUCACCAAc.................... len:21 al:11 ......................................................CAGUCCCACCAGCUCACCA...................... len:19 al:1 ......................................................CAGUCCCACCAGCUCACC....................... len:18 al:3 .......................................................AGUCCCACCAGCUCACCAAUu................... len:21 al:3 .......................................................AGUCCCACCAGCUCACCAA..................... len:19 al:3 .......................................................AGUCCCACCAGCUCACCAAU.................... len:20 al:9 .......................................................AGUCCCACCAGCUCACCAAUA................... len:21 al:1 .......................................................AGUCCCACCAGCUCACCAAc.................... len:20 al:4 ........................................................GUCCCACCAGCUCACCAAUg................... len:20 al:1 .........................................................UaCCACCAGCUCACCAAUA................... len:19 al:1 .........................................................UCCCACCAGCUCACCAAUg................... len:19 al:1 .........................................................UaCCACCAGCUCACCAAU.................... len:18 al:1 ..........................................................CCCACCAGCUCACCAAU.................... len:17 al:1 ...........................................................CCACCAGCUCACCAAUu................... len:17 al:1 ...........................................................CCACCAGCUCACCAAUA................... len:17 al:1 ............................................................CACCAGCUCACCAAc.................... len:15 al:1