Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000005:601572-601666 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1.1-Pmea-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_1963.ps
Locus Name: Cluster_1963
UAUUCUUGGGAUACUCGUCUCUGCCACUCGUAUUUUCUUUCACGUUUAUCGAUGAAAGAAGUACAAGUGGUAGGGAGGGGGUGUCACCAAUUCGC
.....(((((((((((.(((((((((((.((((((.((((((((.....)).)))))))))))).)))))))))))..))))))).))))..... (-45.00)
UgUUCUUGGGAUACUCGUCU........................................................................... len:20 al:42
UAUUCUUGGGAUACUCGUCg........................................................................... len:20 al:13
UAUUCUUGGGAUACUCGUCa........................................................................... len:20 al:21
UAUUCUUGGGAcACUCGUC............................................................................ len:19 al:1
UAUUCUUGGGAUACUCGUaU........................................................................... len:20 al:1
UAUUCUUGGGAUACUCGUCc........................................................................... len:20 al:14
UAUUCUUGGaAUACUCGUCU........................................................................... len:20 al:1
UAUUCUUGGGAUACUCGUCU........................................................................... len:20 al:72
aAUUCUUGGGAUACUCGUCU........................................................................... len:20 al:1
.gUUCUUGGGAUACUCGUCU........................................................................... len:19 al:24
.AUUCUUGGGAUACUCGUCa........................................................................... len:19 al:23
.AcUCUUGGGAUACUCGUCU........................................................................... len:19 al:1
.AUUCUUGGGAUACUCGUCc........................................................................... len:19 al:21
.AUUCUUGGGAUACUCGUaU........................................................................... len:19 al:1
.AUUCUUGGGAUACUCGUCU........................................................................... len:19 al:40
.AUUCUUGGGAUACUCGUCg........................................................................... len:19 al:12
.AUUCUUGGGAUACUCGUC............................................................................ len:18 al:1
.AUUCUUGGGAUACUCGUuU........................................................................... len:19 al:2
..UUCUUGGGAUACUCGUCc........................................................................... len:18 al:2
..UUCUUGGGAUACUCGUCU........................................................................... len:18 al:13
..UUCUUGGGAUACUCGUCg........................................................................... len:18 al:1
..cUCUUGGGAUACUCGUCU........................................................................... len:18 al:1
..UUCUUGGGAUACUCGUCa........................................................................... len:18 al:3
.....UUGGGAUACUCGUCU........................................................................... len:15 al:1
.............CUCGUCUCUGCCACUCGUAUUUUCa......................................................... len:25 al:1
...................UCUGCCACUCGUAUUUUCUUUC...................................................... len:22 al:10
...................UCUGCCACUCGUAUUUcCUUUCA..................................................... len:23 al:1
...................UCUGCCACUCGUAUUUUCUUUCg..................................................... len:23 al:1
...................UCUGCCACUCGUAUUUUCUUg....................................................... len:21 al:1
...................UCUGCCACUCGUAUUUUCUUUCA..................................................... len:23 al:7
...................cCUGCCACUCGUAUUUUCUUUC...................................................... len:22 al:1
....................CUGCCACUaGUAUUUUCUUUC...................................................... len:21 al:2
....................CUGCCAaUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUaU....................................................... len:20 al:1
....................CUGCCACUCGUAUUUUCcUUC...................................................... len:21 al:1
....................CUGCCACUCGUAUUUUCUUU....................................................... len:20 al:18
....................CUGCCACcCGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCAuUCGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUUUUCUUa....................................................... len:20 al:2
....................CUGCCACUuGUAUUUUCUUUC...................................................... len:21 al:1
....................CUGCCACUCGUAUUUUCUUaC...................................................... len:21 al:1
....................CUGCCACUCGcAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUC.......................................................... len:17 al:1
....................CUGCCACUCGUAUUUUCUc........................................................ len:19 al:1
....................CUGCCACUCGUAUUUcCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUa........................................................ len:19 al:1
....................CUGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:965
....................CUGCCACUCGUAgUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUUUUCUUUC...................................................... len:21 al:196
....................CUGCCACUCGUAUUUUCUUUu...................................................... len:21 al:4
....................CUGCCACUCcUAUUUUCU......................................................... len:18 al:1
....................CUGCCACcCGUAUUUUCUUU....................................................... len:20 al:2
....................CUGuCACUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................gUGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUUcCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUUgCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUcUCUUUCA..................................................... len:22 al:2
....................uUGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:5
....................CUGCCACgCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCaUAUUUUCUUUCA..................................................... len:22 al:1
....................CcGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:7
....................CaGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:5
....................CUGCCACcCGUAUUUUCUUUC...................................................... len:21 al:1
....................CUGCCACUCGUAaUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUaGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUUUUCUUUa...................................................... len:21 al:13
....................CUGCCgCUCGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUUUUCUUUCu..................................................... len:22 al:33
....................CUGCCACUCGUAUUUUCUU........................................................ len:19 al:4
....................CUGCCcCUCGUAUUUUCUUUCA..................................................... len:22 al:3
....................CUGCuACUCGUAUUUUCUUUCA..................................................... len:22 al:2
....................CUGCCACUCGUAUUUUCUUUCACGUUUAUCG............................................ len:31 al:1
....................CUGaCACUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUcUCUUUC...................................................... len:21 al:2
....................uUGCCACUCGUAUUUUCUUUC...................................................... len:21 al:3
....................CUGCCACUCGUAUUUUCUUc....................................................... len:20 al:7
....................CUGCCuCUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUUUCc..................................................... len:22 al:7
....................CUGCCACUCGUAUUUUCU......................................................... len:18 al:5
....................CUGCCACUCGUAUcUUCUUUC...................................................... len:21 al:2
....................CUGaCACUCGUAUUUUCUUUC...................................................... len:21 al:1
....................CUGCCACUCGUAUcUUCUUUCA..................................................... len:22 al:2
....................CgGCCACUCGUAUUUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUCGUAUUUUCUUUCg..................................................... len:22 al:23
....................CUGuCACUCGUAUUUUCUUUC...................................................... len:21 al:2
.....................UGCCACUCGUAUUUUCUUUC...................................................... len:20 al:6
.....................UGCCACUCGUAUUUUCUUUCA..................................................... len:21 al:2
.....................UGCCACUCGUAUUUUCUUU....................................................... len:19 al:1
......................GCCACUCGUAUUUUCU......................................................... len:16 al:1
...................................................AUGAAAGAAGUACAAGUGGc........................ len:20 al:1
....................................................UcAAAGAAGUACAAGUGGUAGG..................... len:22 al:1
....................................................UcAAAGAAGUACAAGUGGUAGGG.................... len:23 al:1
.....................................................cAAAGAAGUACAAGUGGUAG...................... len:20 al:5
.....................................................GAAAGAAGUACAAGUGGU........................ len:18 al:1
.....................................................GAAAGAAGUACAAGUGGUAG...................... len:20 al:2
.....................................................cAAAGAAGUACAAGUGGUAGGG.................... len:22 al:7
.....................................................aAAAGAAGUACAAGUGGUAGGGA................... len:23 al:1
.....................................................aAAAGAAGUACAAGUGGUAGGG.................... len:22 al:3
.....................................................aAAAGAAGUACAAGUGGUAGG..................... len:21 al:1
.....................................................cAAAGAAGUACAAGUGGUAGG..................... len:21 al:8
......................................................AAAGAAGUAuAAGUGGUAGG..................... len:20 al:2
......................................................AAAGAAGUACAAaUGGU........................ len:17 al:1
......................................................AAAGAAGUACAAGUGaUAGG..................... len:20 al:7
......................................................AAAGAcGUACAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGUACAAGUGGUAGGaA................... len:22 al:34
......................................................AAAGAAGUACAAGUGGUAcG..................... len:20 al:190
......................................................AuAGAAGUACAAGUGGUAG...................... len:19 al:9
......................................................AAAGAAGUACAAGUGGUAGc..................... len:20 al:93
......................................................AAAGAAGUACAAGUGGUAu...................... len:19 al:508
......................................................AAAGAAGUACAAGUGGUg....................... len:18 al:36
......................................................gAAGAAGUACAAGUGGUAGG..................... len:20 al:42
......................................................AAAGAAGUACAAGcGGUAGG..................... len:20 al:11
......................................................AAAGAAGgACAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGcACAAGUGGU........................ len:17 al:10
......................................................AAAGAAGUACAAGcGGU........................ len:17 al:23
......................................................AAAGAgGUACAAGUGGUAGGGA................... len:22 al:6
......................................................AAAGuAGUACAAGUGGUAGG..................... len:20 al:3
......................................................AcAGAAGUACAAGUGGUAGG..................... len:20 al:17
......................................................AAAGAAGUACAAGgGGU........................ len:17 al:3
......................................................AAAuAAGUACAAGUGGU........................ len:17 al:1
......................................................AAAGAAGUACAAGUGGUAGGGuGGG................ len:25 al:1
......................................................AAAGAAGUACcAGUGGUAG...................... len:19 al:2
......................................................AAAGAAGUACAAuUGGUAG...................... len:19 al:9
......................................................AAAGAAGUACAAGUaGUA....................... len:18 al:2
......................................................AAAGAuGUACAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGaGGUAGG..................... len:20 al:5
......................................................AAAGAAGUACAAaUGGUAGG..................... len:20 al:3
......................................................AAAGAgGUACAAGUGGUA....................... len:18 al:10
......................................................AAAGAAGUACAAGUGGUAa...................... len:19 al:3875
......................................................AAAGAAGUACAAGaGGUAG...................... len:19 al:5
......................................................AAAGAAGUACAAGUGGUAGaG.................... len:21 al:1032
......................................................AAAGAAGUACAAGUGGcAGGG.................... len:21 al:80
......................................................AAAGAAGUACAAGaGGUAGGG.................... len:21 al:19
......................................................AAAGAAGUACAAGUGGUAGuGA................... len:22 al:3
......................................................AAgGAAGUACAAGUGGUAGGGA................... len:22 al:8
......................................................AAAGAAGUACAAGUGGUcGGGA................... len:22 al:1
......................................................AAAGgAGUACAAGUGGUAG...................... len:19 al:67
......................................................AAAGAAGUAgAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGUACuAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUcCAAGUGGUAGGG.................... len:21 al:6
......................................................AuAGAAGUACAAGUGGUAGGGA................... len:22 al:2
......................................................AgAGAAGUACAAGUGGUA....................... len:18 al:6
......................................................AAAGAAGUACAgGUGGUAG...................... len:19 al:36
......................................................AAuGAAGUACAAGUGGUAG...................... len:19 al:5
......................................................AAAGAAGUACAAGgGGUAGG..................... len:20 al:9
......................................................AAAGAAGUACAAGcGGUAGGG.................... len:21 al:89
......................................................AAAGAAGUACAAGUaGUAGGGA................... len:22 al:3
......................................................AAAGAAGUACAAGUGGUAuGGA................... len:22 al:4
......................................................AAAGAAGUACAAGUGGUuG...................... len:19 al:12
......................................................AAAGAAGUACAAGUuGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGaAGG..................... len:20 al:2
......................................................AAAGAAGUACAAGaGGU........................ len:17 al:6
......................................................AAAGAAuUACAAGUGGUAGGGA................... len:22 al:2
......................................................AAAGAAGUACAAGUGGUAGGGu................... len:22 al:12488
......................................................AAAGAuGUACAAGUGGUAGGG.................... len:21 al:6
......................................................AAAGAAcUACAAGUGGUAGGG.................... len:21 al:3
......................................................AAAGAAGUACAcGUGGU........................ len:17 al:1
......................................................AAAGAAGUgCAAGUGGUAGGGA................... len:22 al:17
......................................................AAAGAAGUACAAGUGuUAGGG.................... len:21 al:12
......................................................gAAGAAGUACAAGUGGUAGGG.................... len:21 al:249
......................................................AAAGAAGUACAAGUGGUAGGGAG.................. len:23 al:5
......................................................AAAGAAGUACAAGUGGUuGG..................... len:20 al:3
......................................................AAAGAAGUACAAGUuGUAGGG.................... len:21 al:11
......................................................AAAGAAaUACAAGUGGUAGG..................... len:20 al:1
......................................................AAcGAAGUACAAGUGGUAG...................... len:19 al:230
......................................................AAAGAAGUACAAGUGGUAuG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGUAGGGuG.................. len:23 al:75
......................................................AAAGAAGUACAAGUGGUcGGG.................... len:21 al:296
......................................................AAAGAAGUACuAGUGGUAGGG.................... len:21 al:32
......................................................AAAGAAaUACAAGUGGUAGGGA................... len:22 al:3
......................................................AcAGAAGUACAAGUGGUAGGGA................... len:22 al:10
......................................................AAAGAAGUACAgGUGGUAGGG.................... len:21 al:147
......................................................AAAGAAGUACAAGgGGUAGGGA................... len:22 al:1
......................................................AAAGgAGUACAAGUGGUAGGGA................... len:22 al:10
......................................................AAAGcAGUACAAGUGGUAGG..................... len:20 al:1
......................................................AgAGAAGUACAAGUGGUAGGG.................... len:21 al:200
......................................................AAAGAAGUACAAGUGGUAuGG.................... len:21 al:17
......................................................AAAGAAGUACAAGgGG......................... len:16 al:3
......................................................AAAcAAGUACAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGUACgAGUGGUAGGG.................... len:21 al:199
......................................................AAcGAAGUACAAGUGGUAGGGA................... len:22 al:46
......................................................AAAGAAaUACAAGUGGUAGGG.................... len:21 al:22
......................................................AAAGAAGUACuAGUGGUAGG..................... len:20 al:6
......................................................AAAGAAGUACAAGUGGUu....................... len:18 al:8
......................................................AAAGAAGUACAAGUGGUAaGGA................... len:22 al:3
......................................................uAAGAAGUACAAGUGGUAGG..................... len:20 al:11
......................................................AAAGAAGUACAAGUcGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGUGGgAGGG.................... len:21 al:45
......................................................AAAGAAGUACcAGUGGUAGG..................... len:20 al:3
......................................................AAAGAAGUcCAAGUGGU........................ len:17 al:1
......................................................AAAGAAaUACAAGUGGUA....................... len:18 al:2
......................................................AAAGAAGUgCAAGUGGUAGGG.................... len:21 al:105
......................................................AAAGAAGUACAAGUGGUAGGc.................... len:21 al:641
......................................................AAAGAAGUACAAGUaGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGUAcGG.................... len:21 al:5
......................................................AAAGAAGUACgAGUGGUAG...................... len:19 al:80
......................................................AAAGAAGcACAAGUGGUAG...................... len:19 al:28
......................................................cAAGAAGUACAAGUGGUA....................... len:18 al:16
......................................................AAAGAgGUACAAGUGGUAGG..................... len:20 al:26
......................................................AAAGAAuUACAAGUGGUAG...................... len:19 al:8
......................................................AAAGgAGUACAAGUGGUAGGG.................... len:21 al:135
......................................................AAAuAAGUACAAGUGGUAGGG.................... len:21 al:4
......................................................AAAGAAGUACAAGUGGUAaG..................... len:20 al:70
......................................................AAAGAAGUACAAGUGGUAGGcA................... len:22 al:15
......................................................AAAGAuGUACAAGUGGUAG...................... len:19 al:2
......................................................AAAGAgGUACAAGUGGUAGGG.................... len:21 al:129
......................................................AAAGAAGUAuAAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAAGUACAAGUGGgAGG..................... len:20 al:52
......................................................AAAGAAGUACAAGUGGUAc...................... len:19 al:567
......................................................AAAGAAGUgCAAGUGGUAGGGAGGG................ len:25 al:1
......................................................AAAGAAGUACAAGaGGUAGGGA................... len:22 al:2
......................................................AAAGAAGUACgAGUGGUAGG..................... len:20 al:28
......................................................AAAGAAGUACAAGUaG......................... len:16 al:2
......................................................AAAcAAGUACAAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAAGUACAAGUGGUcG...................... len:19 al:1726
......................................................cAAGAAGUACAAGUGGUAG...................... len:19 al:126
......................................................AAAGAAGUACuAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAcGUACAAGUGGU........................ len:17 al:1
......................................................AAAGAAGUACAAGUGGUAGuG.................... len:21 al:28
......................................................AAgGAAGUACAAGUGGUAGGG.................... len:21 al:172
......................................................AAAGAAGUACAAGUGuUAG...................... len:19 al:1
......................................................AAAGAAGUACAAGgGGUAG...................... len:19 al:7
......................................................AAAGAAGUACAAuUGGUAGGG.................... len:21 al:21
......................................................AAgGAAGUACAAGUGGUAGG..................... len:20 al:20
......................................................AAAGAAGUACAAGUGGgAGGGA................... len:22 al:1
......................................................AAAGAAGUACAAGcGGUA....................... len:18 al:3
......................................................AAAGAAGcACAAGUGGUA....................... len:18 al:2
......................................................AAAGAAGUACAAGUGGaAGGGA................... len:22 al:1
......................................................AAAGAAGUACAgGUGGUAGGGA................... len:22 al:8
......................................................AAAGAAGUACAAGUGGUAGG..................... len:20 al:7426
......................................................AAAGAAGUACAAGUaGUAGGG.................... len:21 al:30
......................................................AAAGAAGUACAAGUGuUAGG..................... len:20 al:4
......................................................AuAGAAGUACAAGUGGUAGG..................... len:20 al:4
......................................................AAAGAAGUACAAGUGuUAGGGA................... len:22 al:2
......................................................AAAGAAGUACAAGUGGUAGGu.................... len:21 al:2897
......................................................AAAGAAGUACAAGUGGUAGGGuGG................. len:24 al:3
......................................................AAAGAAGUAgAAGUGGUAGGG.................... len:21 al:4
......................................................AAAGAAuUACAAGUGGUAGGG.................... len:21 al:4
......................................................AAAGAAGUACAAGUcGUAGG..................... len:20 al:1
......................................................AgAGAAGUACAAGUGGU........................ len:17 al:23
......................................................AAAGAAGUACAAGUGGUAGu..................... len:20 al:480
......................................................AAAGAAGUACAAGUGGUAGGG.................... len:21 al:42404
......................................................AAAGAAGUACuAGUGGU........................ len:17 al:1
......................................................uAAGAAGUACAAGUGGUAGGGA................... len:22 al:6
......................................................AAAGAAGUACAAGUGGaAG...................... len:19 al:5
......................................................AAAGAgGUACAAGUGGU........................ len:17 al:15
......................................................AAcGAAGUACAAGUGGUAGGG.................... len:21 al:627
......................................................AAAGAAGUACAAGUaGU........................ len:17 al:14
......................................................AAAGAuGUACAAGUGGU........................ len:17 al:1
......................................................AAAuAAGUACAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGgGGUA....................... len:18 al:3
......................................................AAAGAAGUACAAGUGGUAGGa.................... len:21 al:15242
......................................................AAAGAAGUACgAGUGGU........................ len:17 al:21
......................................................cAAGAAGUACAAGUGGUAGGGA................... len:22 al:16
......................................................AAAGcAGUACAAGUGGUAGGG.................... len:21 al:1
......................................................AAAGAAGUAuAAGUGGUA....................... len:18 al:1
......................................................AAgGAAGUACAAGUGGUA....................... len:18 al:15
......................................................AAAGAAGUACAgGUGGUAGG..................... len:20 al:14
......................................................AAcGAAGUACAAGUGGUAGG..................... len:20 al:103
......................................................AAAGAAGgACAAGUGGUAGGG.................... len:21 al:4
......................................................AAAGAAGUACAAGcGGUAG...................... len:19 al:21
......................................................AAAGAAGaACAAGUGGUAG...................... len:19 al:6
......................................................AAAGAuGUACAAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAAGUACAgGUGGUA....................... len:18 al:6
......................................................uAAGAAGUACAAGUGGUAGGG.................... len:21 al:69
......................................................AAuGAAGUACAAGUGGUA....................... len:18 al:2
......................................................AAAGAAGUACAAuUGGUA....................... len:18 al:1
......................................................AAgGAAGUACAAGUGGUAG...................... len:19 al:60
......................................................AAAGAAGUACcAGUGGUAGGG.................... len:21 al:8
......................................................AAAGAAGUACAAGUuGUAGGGA................... len:22 al:1
......................................................AAAcAAGUACAAGUGGUAGGG.................... len:21 al:1
......................................................AAAGAAGUACAAGUGGUgGG..................... len:20 al:30
......................................................cAAGAAGUACAAGUGGUAGGG.................... len:21 al:362
......................................................AAAGAAGUACAAGUGGUAGGGAuG................. len:24 al:2
......................................................AcAGAAGUACAAGUGGU........................ len:17 al:8
......................................................AAAGAAGaACAAGUGGUAGGG.................... len:21 al:16
......................................................AAAGAcGUACAAGUGGUAGG..................... len:20 al:2
......................................................AAAGAAGUACAAGUGcU........................ len:17 al:27
......................................................AAAGAcGUACAAGUGGUAGGG.................... len:21 al:5
......................................................AAAGAAGUACAAGUGGUA....................... len:18 al:2246
......................................................AAAGAAGaACAAGUGGUAGG..................... len:20 al:2
......................................................AAAGAAGUACAuGUGGU........................ len:17 al:1
......................................................AAAGAAGUACAAGUGGUAGGGgG.................. len:23 al:17
......................................................AAAGAAGUACAAGUGuUA....................... len:18 al:1
......................................................AAAGAAGUACAAGUGGUAGcG.................... len:21 al:457
......................................................AAAGAAGUACAAGUGGcA....................... len:18 al:43
......................................................AcAGAAGUACAAGUGGUAG...................... len:19 al:32
......................................................AAAGAAGUACAAGUGGUgGGGA................... len:22 al:12
......................................................AgAGAAGUACAAGUGGUAGG..................... len:20 al:27
......................................................AAAGAAGUACAAGUGGUuGGG.................... len:21 al:40
......................................................AAuGAAGUACAAGUGGUAGG..................... len:20 al:7
......................................................AAAGAAGgACAAGUGGUAGGGA................... len:22 al:2
......................................................AAAGAAaUACAAGUGGUAG...................... len:19 al:6
......................................................AAAGAAGUACAAcUGGUAGGG.................... len:21 al:2
......................................................AAAGAAGUcCAAGUGGUAG...................... len:19 al:1
......................................................AAAGuAGUACAAGUGGUAG...................... len:19 al:2
......................................................AAAGAAGUACAAGUGGcAGGGA................... len:22 al:5
......................................................AAAaAAGUACAAGUGGUAGGG.................... len:21 al:7
......................................................AAAGAAGUACAAGUGGaAGGG.................... len:21 al:17
......................................................AAAGAAGUAuAAGUGGUAGGG.................... len:21 al:36
......................................................AgAGAAGUACAAGUGGUAGGGA................... len:22 al:13
......................................................AAAGAAGUACAAuUGGUAGGGA................... len:22 al:3
......................................................AAAGAAGUAaAAGUGGUAGGG.................... len:21 al:12
......................................................AAAGAAGUACAAGUGGUAGGGcG.................. len:23 al:6
......................................................AAuGAAGUACAAGUGGUAGGG.................... len:21 al:16
......................................................AAAGAAuUACAAGUGGUAGG..................... len:20 al:2
......................................................AAAGAAGUACAAGUGGUgGGG.................... len:21 al:170
......................................................AgAGAAGUACAAGUGGUAG...................... len:19 al:72
......................................................AAAGAAGUACAAGUGGUAGGGA................... len:22 al:2626
......................................................AAAGAAGUAuAAGUGGUAG...................... len:19 al:22
......................................................AAAGAAGUACAAGUGGUAGaGA................... len:22 al:7
......................................................AAcGAAGUACAAGUGGU........................ len:17 al:61
......................................................AAAGuAGUACAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGUGGa........................ len:17 al:359
......................................................AAAGAAGaACAAGUGGUA....................... len:18 al:1
......................................................AuAGAAGUACAAGUGGUAGGG.................... len:21 al:32
......................................................uAAGAAGUACAAGUGGUAG...................... len:19 al:26
......................................................AAAGAAGUACAAGUGGg........................ len:17 al:282
......................................................AAAGAAGUACAuGUGGUAG...................... len:19 al:16
......................................................AAAGAAGUACAcGUGGUAG...................... len:19 al:5
......................................................AAAGgAGUACAAGUGGUA....................... len:18 al:7
......................................................AAAGAAGUAaAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGcGGUAGGGA................... len:22 al:5
......................................................AAAGAAGUAaAAGUGGUAG...................... len:19 al:4
......................................................AAAGuAGUACAAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAAGUgCAAGUGGUAGG..................... len:20 al:22
......................................................AAAGAAGUACAAGUGGUAGGGAa.................. len:23 al:39
......................................................AAAGcAGUACAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGUGcUAGGG.................... len:21 al:1
......................................................AAAGAAGUACAAGUGGUAG...................... len:19 al:15972
......................................................AuAGAAGUACAAGUGGU........................ len:17 al:3
......................................................AAAuAAGUACAAGUGGUAG...................... len:19 al:4
......................................................cAAGAAGUACAAGUGGUAGG..................... len:20 al:80
......................................................AAAGAAGUACAAGUGGcAGG..................... len:20 al:19
......................................................AAAGAAGcACAAGUGGUAGGG.................... len:21 al:62
......................................................AAAGAAGUACAcGUGGUAGGG.................... len:21 al:13
......................................................AAAGAAGUACAAGUGGUcGG..................... len:20 al:609
......................................................AAAGAAGUACAAGUG.......................... len:15 al:10
......................................................gAAGAAGUACAAGUGGUAGGGA................... len:22 al:11
......................................................AAAGgAGUACAAGUGGU........................ len:17 al:17
......................................................AAAGAAGUAaAAGUGGU........................ len:17 al:3
......................................................AAAGAAGUACAAGUGGUAaGG.................... len:21 al:40
......................................................AAAGAAGUACAAGUGG......................... len:16 al:32
......................................................AAAGAAGUACAAGUGGgA....................... len:18 al:4
......................................................AAuGAAGUACAAGUGGUAGGGA................... len:22 al:2
......................................................AcAGAAGUACAAGUGGUAGGG.................... len:21 al:87
......................................................AAAGAAGcACAAGUGGUAGG..................... len:20 al:8
......................................................AAAGAAGUACAuGUGGUAGG..................... len:20 al:4
......................................................AAAGAAGUACAAGUGGUuGGGA................... len:22 al:2
......................................................AAAGAAGcACAAGUGGUAGGGA................... len:22 al:5
......................................................AAAGAAGUACAcGUGGUAGG..................... len:20 al:4
......................................................AAAGAAGaACAAGUGGU........................ len:17 al:1
......................................................AAAGAAGUACuAGUGGUAG...................... len:19 al:7
......................................................AAAGuAGUACAAGUGGU........................ len:17 al:2
......................................................AAcGAAGUACAAGUGGUA....................... len:18 al:39
......................................................AAAGAAGUACAAGUGGaA....................... len:18 al:46
......................................................AAAaAAGUACAAGUGGUAG...................... len:19 al:4
......................................................AAAGuAGUACAAGUGGUAGGG.................... len:21 al:14
......................................................AAAGAAGUACAAaUGGUAG...................... len:19 al:6
......................................................AAAGAAGUACAAGUaGUAG...................... len:19 al:17
......................................................AAAGgAGUACAAGUGGUAGG..................... len:20 al:22
......................................................AAAGAAGUACAAGUGGcAG...................... len:19 al:22
......................................................AcAGAAGUACAAGUGGUA....................... len:18 al:9
......................................................AAAGAAGUACAAGUGGgAG...................... len:19 al:122
......................................................AAAGAAGUACAAuUGGU........................ len:17 al:2
......................................................AAAGAAGUACcAGUGGU........................ len:17 al:1
......................................................AAuGAAGUACAAGUGGU........................ len:17 al:4
......................................................AAAGAAGUACAgGUGGU........................ len:17 al:15
......................................................AAAGAAGUACAAGUGGUAGGGAc.................. len:23 al:6
......................................................AAAGAAGUACAAGUGaUAGGGA................... len:22 al:4
......................................................AAgGAAGUACAAGUGGU........................ len:17 al:16
......................................................AAAGAAGUACAAGUGGUAGGGg................... len:22 al:970
......................................................AAAGAgGUACAAGUGGUAG...................... len:19 al:57
......................................................AAAGAAGUAuAAGUGGU........................ len:17 al:5
......................................................AAAGAAGUACAAGUGaUAGGG.................... len:21 al:27
......................................................AAAGAAGUACgAGUGGUA....................... len:18 al:9
......................................................AAAGAAGUACAAGUGGUAGGGc................... len:22 al:3142
......................................................AAAGAAGUACAAGUGGUAGa..................... len:20 al:2386
......................................................AAAGAAGUACAAaUGGUAGGG.................... len:21 al:14
......................................................AAAGAAGUACAAGUGGUAGGGAu.................. len:23 al:53
......................................................AAAGAAGUACAAGUGGc........................ len:17 al:1067
......................................................AAAGAAGUACAAGUGuU........................ len:17 al:4
......................................................AAAGAAGUACAuGUGGUAGGG.................... len:21 al:22
......................................................AAAGAAGUACgAGUGGUAGGGA................... len:22 al:12
......................................................AAAGAAGUACAAGUuGUAG...................... len:19 al:5
......................................................AAAGAAGUACAAGUGGU........................ len:17 al:4035
......................................................AAAGAAGUACAAGUGGUgG...................... len:19 al:86
......................................................AAAGAAGUACAAGUGGUAGGuA................... len:22 al:4
......................................................AAAGAAGUACAAGgGGUAGGG.................... len:21 al:36
......................................................AAAGAAGUACAAGUGcUA....................... len:18 al:1
......................................................AAAGcAGUACAAGUGGUAG...................... len:19 al:1
.......................................................AAGAAGUACAAGUGGUAGGG.................... len:20 al:34
.......................................................AgGAAGUACAAGUGGUA....................... len:17 al:1
.......................................................cAGAAGUACAAGUGGU........................ len:16 al:1
.......................................................AAGAAGUACAAGUGGUAcG..................... len:19 al:1
.......................................................AAGAAGUACAAGUGGUAGGGu................... len:21 al:17
.......................................................AAGAAGUACAAGgGG......................... len:15 al:1
.......................................................uAGAAGUACAAGUGGUAGGG.................... len:20 al:1
.......................................................AAaAAGUACAAGUGGUAGGG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUcG...................... len:18 al:1
.......................................................AAGAAGUACAAGUGGUAGu..................... len:19 al:1
.......................................................AAuAAGUACAAGUGGUAGG..................... len:19 al:1
.......................................................AAGAAGUACAAGUGGaA....................... len:17 al:2
.......................................................AAGAAGUACAAGUGGUAG...................... len:18 al:11
.......................................................AAGAAGUACAAGUGGUAa...................... len:18 al:3
.......................................................AAGAAGUACAAGUGGUA....................... len:17 al:2
.......................................................AAGAAGUACgAGUGGUAGGG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUAGGGc................... len:21 al:1
.......................................................AAGAAGUACAAGUGGUAGGa.................... len:20 al:14
.......................................................AAGAAGUACAAGUGGUAGGu.................... len:20 al:4
.......................................................AAGAAGUACAAGUGGUAGGc.................... len:20 al:1
.......................................................cAGAAGUACAAGUGGUAGGG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUAGaG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGU........................ len:16 al:5
.......................................................AAGAAGUACAAGUGGc........................ len:16 al:2
.......................................................AAGAAGUACAAGUGGUAGcG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUcGG..................... len:19 al:2
.......................................................AAGAAGUACAAGUGGUAGGGg................... len:21 al:1
.......................................................AAGAAGUACAAGUGGUgGG..................... len:19 al:1
.......................................................AAGAAGUACAAGUGGUAGG..................... len:19 al:9
........................................................AGAAGUACAAGUGGUAGG..................... len:18 al:5
........................................................AGAAGUACAgGUGGUAGGG.................... len:19 al:2
........................................................AGAAGUACAAGUGGUAGGGc................... len:20 al:5
........................................................AGAAGUACAAGUGGUcG...................... len:17 al:1
........................................................AGAAGUACAAGUGGUA....................... len:16 al:6
........................................................AGAAGUACAAGUGGUAGcG.................... len:19 al:1
........................................................AGAAGUACAAGUGGUAG...................... len:17 al:16
........................................................AGAAGUACAAGUGGc........................ len:15 al:1
........................................................uGAAGUACAAGUGGUAGGG.................... len:19 al:1
........................................................AGAAGUACAAGUGGg........................ len:15 al:1
........................................................AGAAGUACAAGUGGUcGGG.................... len:19 al:1
........................................................AGAAGUACAAGUGGUAGGu.................... len:19 al:1
........................................................AGAAGUACAAGUGGUAGGGu................... len:20 al:15
........................................................AaAAGUACAAGUGGUAGGG.................... len:19 al:1
........................................................AGAAGUACAAGUGGU........................ len:15 al:5
........................................................AGAAGUACAAGUGGUAGGGA................... len:20 al:6
........................................................AGAAGUACAAGUGGUAcG..................... len:18 al:1
........................................................AGAAGUACAAGUGGUAGGGg................... len:20 al:2
........................................................AGAAGUACAAGUGGUAGGG.................... len:19 al:43
........................................................AGAAGUACAAGUGGUAGGa.................... len:19 al:12
.........................................................GAAGUACAAGUGGUAG...................... len:16 al:1
.........................................................aAAGUACAAGUGGUAG...................... len:16 al:1
.........................................................GAAGUACAAGUGGUAGGa.................... len:18 al:1
.........................................................GAgGUACAAGUGGUAGG..................... len:17 al:1
.........................................................GAAGUACAAGUGGUAGG..................... len:17 al:2
.........................................................GAAGUACAAGUGGUAGGG.................... len:18 al:5
.........................................................aAAGUACAAGUGGUAGGG.................... len:18 al:2
..........................................................AAGUACAAGUGGUAG...................... len:15 al:5
..........................................................AAGUACAAGUGGUAGGG.................... len:17 al:9
..........................................................AAGUACAAGUGGUAGGGc................... len:18 al:4
..........................................................AAGUACAAGUGGUAGG..................... len:16 al:9
..........................................................AAGUACAAGUGGUAGGGu................... len:18 al:3
..........................................................AAGUACAAGUGGUAGGa.................... len:17 al:3
...........................................................AGUACAAGUGGUAGG..................... len:15 al:4
...........................................................AGUACAAGUGGUAGGG.................... len:16 al:6
...........................................................cGUACAAGUGGUAGGG.................... len:16 al:1
...........................................................AGUACAAGUGGUAGGGu................... len:17 al:2
............................................................GUACAAGUGGUAGGGu................... len:16 al:2
.............................................................UACAAGUGGUAGGGu................... len:15 al:2
.............................................................UACAAGUGGUAGGGA................... len:15 al:1
..........................................................................GAGGGGGgGUCACCA...... len:15 al:2
...........................................................................AGGGGGUGUCACCAAUUCGC len:20 al:1