Locus	Name	Chrom	Start	End	Length	Reads	DistinctSequences	FracTop	Strand	MajorRNA	MajorRNAReads	Short	Long	21	22	23	24	DicerCall	MIRNA	known_miRNAs
Pocillopora_meandrina_HIv1___Sc0000000:9092-9521	Cluster_1	Pocillopora_meandrina_HIv1___Sc0000000	9092	9521	430	11202	411	0.9999107302267453	+	GGGGGUAUAGCUCAGUGGUAGA	3782	1923	3712	696	4266	173	432	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:53578-53997	Cluster_2	Pocillopora_meandrina_HIv1___Sc0000000	53578	53997	420	439	30	0.9977220956719818	+	GCCUAAGUUGCUUGGAACA	141	437	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:150243-150718	Cluster_3	Pocillopora_meandrina_HIv1___Sc0000000	150243	150718	476	2664	283	0.0007507507507507507	-	UGGCUAUGAUGAAAAUGACU	327	1005	356	629	369	138	167	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:173728-174150	Cluster_4	Pocillopora_meandrina_HIv1___Sc0000000	173728	174150	423	1253	72	0.9960095770151636	+	UUUGAUUGCUGUGAUCUGGUUG	369	120	2	43	623	435	30	22	N	apa-mir-2050_Exaiptasia_pallida_Baumgarten_et_al._2017_miR-2050;_Nve;_Spis;_Adi
Pocillopora_meandrina_HIv1___Sc0000000:187562-188072	Cluster_5	Pocillopora_meandrina_HIv1___Sc0000000	187562	188072	511	178	35	0.43820224719101125	.	AUAAAUGUCACUACAAGAAACCUGAAAUCGU	25	2	170	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:485727-486254	Cluster_6	Pocillopora_meandrina_HIv1___Sc0000000	485727	486254	528	325	146	0.9969230769230769	+	GAUGGGUGUUAUUACUCCUCAGACAGAC	48	109	180	7	11	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:525310-527341	Cluster_7	Pocillopora_meandrina_HIv1___Sc0000000	525310	527341	2032	14563	3089	0.18347867884364485	-	UUUUCGUCACUUUCUUCAGCCUCAGAGU	947	217	13387	53	107	313	486	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:541262-541723	Cluster_8	Pocillopora_meandrina_HIv1___Sc0000000	541262	541723	462	679	131	0.07216494845360824	-	UUGGACGAAAUUUCGAGGUUCACACUCGUU	85	0	675	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:551887-552690	Cluster_9	Pocillopora_meandrina_HIv1___Sc0000000	551887	552690	804	844	270	0.21208530805687204	.	UUCAAGGAGGAUGUAUCCACUGUCAUU	91	21	766	9	4	17	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:555673-556458	Cluster_10	Pocillopora_meandrina_HIv1___Sc0000000	555673	556458	786	856	204	0.07126168224299065	-	UUGGACGAAAUUUCGAGGUUCACACUCGUU	94	5	840	0	5	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:581045-581465	Cluster_11	Pocillopora_meandrina_HIv1___Sc0000000	581045	581465	421	194	81	0.8969072164948454	+	UCAAAUACAACACCAAAAGAC	44	12	118	50	0	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:591361-591939	Cluster_12	Pocillopora_meandrina_HIv1___Sc0000000	591361	591939	579	759	218	0.9538866930171278	+	UGCAUUUUCUCCGAGAUCUCUGGUCGGG	96	13	724	3	4	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:616336-616751	Cluster_13	Pocillopora_meandrina_HIv1___Sc0000000	616336	616751	416	100	36	0.87	+	CGAUUGUGAUACUCUA	32	55	18	2	16	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:639521-640061	Cluster_14	Pocillopora_meandrina_HIv1___Sc0000000	639521	640061	541	580	156	0.7758620689655172	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	166	4	552	4	0	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:682031-682445	Cluster_15	Pocillopora_meandrina_HIv1___Sc0000000	682031	682445	415	79	6	1.0	+	GAGACUUGAAGCGGC	64	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:721030-721459	Cluster_16	Pocillopora_meandrina_HIv1___Sc0000000	721030	721459	430	628	68	1.0	+	UGAUGAUCGUAAUGAUUUCCAUGGGGU	132	10	589	0	1	21	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:721923-722470	Cluster_17	Pocillopora_meandrina_HIv1___Sc0000000	721923	722470	548	2960	470	1.0	+	UAGCAUACAUGUAGACCCUGGUAGAGUA	479	353	1944	82	278	190	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:727164-727725	Cluster_18	Pocillopora_meandrina_HIv1___Sc0000000	727164	727725	562	880	233	0.9965909090909091	+	GACCACAUGUUACUGAUGAGCUUAGU	144	133	538	22	53	64	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:789491-789906	Cluster_19	Pocillopora_meandrina_HIv1___Sc0000000	789491	789906	416	87	14	1.0	+	UGCGGAGUGGAGCAGU	47	83	3	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:815897-816398	Cluster_20	Pocillopora_meandrina_HIv1___Sc0000000	815897	816398	502	1678	610	0.006555423122765197	-	UACUUAUAAGCAGUAGAGGCGUU	67	731	415	177	89	168	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:818027-818120	Cluster_21	Pocillopora_meandrina_HIv1___Sc0000000	818027	818120	94	12326	316	0.9990264481583644	+	UGUUCUCUCUGCAGUAAGCAUGU	3181	911	78	205	3237	5360	2535	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:923725-924139	Cluster_22	Pocillopora_meandrina_HIv1___Sc0000000	923725	924139	415	315	20	0.012698412698412698	-	GGUUGGAUCCGGCCG	247	313	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:987729-988269	Cluster_23	Pocillopora_meandrina_HIv1___Sc0000000	987729	988269	541	577	158	0.7625649913344887	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	175	1	554	5	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1215302-1215757	Cluster_24	Pocillopora_meandrina_HIv1___Sc0000000	1215302	1215757	456	2605	238	0.012284069097888676	-	GUCUUUGUAGUGUAG	884	2136	430	12	12	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1253655-1254057	Cluster_25	Pocillopora_meandrina_HIv1___Sc0000000	1253655	1254057	403	76	54	0.9605263157894737	+	UUUGAUUUGGAGUGGGGCU	5	48	13	8	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1276611-1277081	Cluster_26	Pocillopora_meandrina_HIv1___Sc0000000	1276611	1277081	471	1972	620	0.9984787018255578	+	CCAAUGGAUAAGGCAUCUGACUGCG	58	656	843	87	124	114	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1336780-1337291	Cluster_27	Pocillopora_meandrina_HIv1___Sc0000000	1336780	1337291	512	2828	559	0.0049504950495049506	-	UCCCGGGUCUCGGCAGCCUUUU	266	1104	294	382	531	359	158	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1378697-1379231	Cluster_28	Pocillopora_meandrina_HIv1___Sc0000000	1378697	1379231	535	1409	462	0.0042583392476933995	-	UAAGACUUUCAUUUAGACCUGGAACAAUU	115	239	854	40	50	143	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1637504-1637919	Cluster_29	Pocillopora_meandrina_HIv1___Sc0000000	1637504	1637919	416	147	33	0.08843537414965986	-	GAAUCGGUCGUGGAUU	32	140	4	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1688897-1689394	Cluster_30	Pocillopora_meandrina_HIv1___Sc0000000	1688897	1689394	498	412	183	0.529126213592233	.	ACAUUUAGUAAUUACAAGAACCAUGACACU	44	15	373	3	3	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1750814-1751510	Cluster_31	Pocillopora_meandrina_HIv1___Sc0000000	1750814	1751510	697	237	126	0.9324894514767933	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	20	4	221	1	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1752745-1753173	Cluster_32	Pocillopora_meandrina_HIv1___Sc0000000	1752745	1753173	429	278	156	0.8741007194244604	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	33	6	256	1	2	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1868815-1869232	Cluster_33	Pocillopora_meandrina_HIv1___Sc0000000	1868815	1869232	418	366	38	0.01912568306010929	-	UCUUGUGGCUAGGGU	149	359	2	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2007022-2007452	Cluster_34	Pocillopora_meandrina_HIv1___Sc0000000	2007022	2007452	431	294	101	0.04081632653061224	-	UGUGUAAACAUUGCAACACGAUCUGACA	25	7	280	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2063456-2063972	Cluster_35	Pocillopora_meandrina_HIv1___Sc0000000	2063456	2063972	517	6007	792	0.00249708673214583	-	AAGGAUGCCGAGAUAGCUC	731	3380	461	541	951	497	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2159721-2160378	Cluster_36	Pocillopora_meandrina_HIv1___Sc0000000	2159721	2160378	658	1127	332	0.07630878438331855	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	118	10	1065	5	5	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2160616-2161042	Cluster_37	Pocillopora_meandrina_HIv1___Sc0000000	2160616	2161042	427	241	141	0.15352697095435686	-	UGAGUCGAGGUUAUUCACAAUACGAGC	28	6	213	1	1	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2221328-2221740	Cluster_38	Pocillopora_meandrina_HIv1___Sc0000000	2221328	2221740	413	94	20	0.010638297872340425	-	UGAUCCGGCCCGGACA	33	94	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2312271-2312685	Cluster_39	Pocillopora_meandrina_HIv1___Sc0000000	2312271	2312685	415	207	25	0.0	-	CUUUCUGAGGUCGCG	114	207	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2335702-2336115	Cluster_40	Pocillopora_meandrina_HIv1___Sc0000000	2335702	2336115	414	117	86	0.9914529914529915	+	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	6	68	23	9	7	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2750560-2752027	Cluster_41	Pocillopora_meandrina_HIv1___Sc0000000	2750560	2752027	1468	1786	768	0.9535274356103024	+	UGAUUUCCUCUCUGACAUCUAAAGGUAGG	50	15	1665	10	19	38	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2872019-2872110	Cluster_42	Pocillopora_meandrina_HIv1___Sc0000000	2872019	2872110	92	173	30	1.0	+	AUAGUAUUGUCGACAGGUACU	58	19	0	109	42	3	0	21	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:2959034-2959448	Cluster_43	Pocillopora_meandrina_HIv1___Sc0000000	2959034	2959448	415	144	78	0.9791666666666666	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	11	2	130	2	7	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2959659-2960409	Cluster_44	Pocillopora_meandrina_HIv1___Sc0000000	2959659	2960409	751	1430	580	0.7972027972027972	.	UUCCAGCACAAAAGAGACAAAAGGAGUUCAA	64	44	1218	7	23	46	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3005892-3006331	Cluster_45	Pocillopora_meandrina_HIv1___Sc0000000	3005892	3006331	440	1143	181	0.023622047244094488	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	308	7	1116	3	2	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3006340-3006751	Cluster_46	Pocillopora_meandrina_HIv1___Sc0000000	3006340	3006751	412	140	79	0.12857142857142856	-	UUCUUUGUAACGCUGUGGUCCUUCCAC	16	1	119	3	1	12	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3251850-3252263	Cluster_47	Pocillopora_meandrina_HIv1___Sc0000000	3251850	3252263	414	84	23	0.9761904761904762	+	AAGUGUGCUCUUAACAG	21	83	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3308776-3309192	Cluster_48	Pocillopora_meandrina_HIv1___Sc0000000	3308776	3309192	417	260	15	0.019230769230769232	-	CUUGUGGCUAGGGUCCA	232	246	2	2	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3412071-3412488	Cluster_49	Pocillopora_meandrina_HIv1___Sc0000000	3412071	3412488	418	191	57	0.005235602094240838	-	CUUCUUAGAGGGACUGUC	20	190	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3581988-3582720	Cluster_50	Pocillopora_meandrina_HIv1___Sc0000000	3581988	3582720	733	445	212	0.6876404494382022	.	UUAUUUCUACAUAGAGUGAGCUCACAUC	77	46	331	20	7	24	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3603652-3604077	Cluster_51	Pocillopora_meandrina_HIv1___Sc0000000	3603652	3604077	426	216	36	0.05555555555555555	-	UAAGACAUUGGCAUACUUGGCAUACA	144	3	204	0	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3628199-3628623	Cluster_52	Pocillopora_meandrina_HIv1___Sc0000000	3628199	3628623	425	77	16	0.0	-	UGAACUACUGCUCGUACUCUAGAUACG	32	1	76	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3691324-3691932	Cluster_53	Pocillopora_meandrina_HIv1___Sc0000000	3691324	3691932	609	8092	1183	0.00012357884330202668	-	CACUCUGAGAAGUGGAGAGACAGUU	1548	716	5134	283	298	426	1235	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3821020-3821448	Cluster_54	Pocillopora_meandrina_HIv1___Sc0000000	3821020	3821448	429	211	116	0.023696682464454975	-	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	17	99	79	15	11	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3822514-3823003	Cluster_55	Pocillopora_meandrina_HIv1___Sc0000000	3822514	3823003	490	238	129	0.02100840336134454	-	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	21	91	94	26	10	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3848323-3848809	Cluster_56	Pocillopora_meandrina_HIv1___Sc0000000	3848323	3848809	487	9729	676	0.00010278548668927948	-	AUACUGUGAUGAAGAAAAGGACUCCCU	1412	812	5652	497	594	1522	652	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3848821-3849296	Cluster_57	Pocillopora_meandrina_HIv1___Sc0000000	3848821	3849296	476	277	181	0.0	-	GAUGACAACAAGAAACUUGGAGAA	9	81	98	29	24	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3849326-3849741	Cluster_58	Pocillopora_meandrina_HIv1___Sc0000000	3849326	3849741	416	204	136	0.00980392156862745	-	GUAUGUUAAGCUUGUUGAGGCCCUGU	11	76	77	21	10	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3908371-3908786	Cluster_59	Pocillopora_meandrina_HIv1___Sc0000000	3908371	3908786	416	120	18	0.9833333333333333	+	CCGGGAAGGAAUCGGA	68	120	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3911700-3912114	Cluster_60	Pocillopora_meandrina_HIv1___Sc0000000	3911700	3912114	415	149	4	1.0	+	GUAGUCGUGGCCGAA	124	149	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4077445-4077859	Cluster_61	Pocillopora_meandrina_HIv1___Sc0000000	4077445	4077859	415	84	13	0.023809523809523808	-	GGGGGACUAACUCAG	45	83	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4241544-4242078	Cluster_62	Pocillopora_meandrina_HIv1___Sc0000000	4241544	4242078	535	2805	456	1.0	+	CCUGGGAAAUGGAAUCCAACAGAA	820	574	1045	149	53	71	913	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4422273-4423231	Cluster_63	Pocillopora_meandrina_HIv1___Sc0000000	4422273	4423231	959	966	384	0.484472049689441	.	UCACACUUUUGUCUCGCAAGUCGUUGGCG	87	54	782	5	14	55	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4429481-4429904	Cluster_64	Pocillopora_meandrina_HIv1___Sc0000000	4429481	4429904	424	202	88	0.9801980198019802	+	UCAAAAGCUGCCGAUAAAUCUAAA	42	3	143	3	1	4	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4429917-4430343	Cluster_65	Pocillopora_meandrina_HIv1___Sc0000000	4429917	4430343	427	146	78	0.863013698630137	+	UCAGACUAGCAACAUGAUCUUCGGUGA	17	2	135	3	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4430717-4431143	Cluster_66	Pocillopora_meandrina_HIv1___Sc0000000	4430717	4431143	427	410	125	0.9536585365853658	+	UGUACAAGGUCGAAAGAAUCCAGGAUA	160	2	387	1	0	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4431213-4432144	Cluster_67	Pocillopora_meandrina_HIv1___Sc0000000	4431213	4432144	932	1013	329	0.9585389930898321	+	UAAUGACUUCAGAGUAGACAGAGACGGU	73	10	981	6	4	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4528180-4528608	Cluster_68	Pocillopora_meandrina_HIv1___Sc0000000	4528180	4528608	429	142	40	0.04225352112676056	-	UCUAUGAUCUUAUAAUGCGACAGUAUGAUU	33	3	138	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4531785-4532259	Cluster_69	Pocillopora_meandrina_HIv1___Sc0000000	4531785	4532259	475	1161	350	0.0017226528854435831	-	CCUUAGUGAUGAUAGAAGAUGCCGC	45	266	493	97	101	92	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4532300-4532706	Cluster_70	Pocillopora_meandrina_HIv1___Sc0000000	4532300	4532706	407	159	114	0.018867924528301886	-	CAAGAGUGAAACUGGAUGGUC	4	55	44	17	18	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4534325-4534799	Cluster_71	Pocillopora_meandrina_HIv1___Sc0000000	4534325	4534799	475	4384	672	0.0006843065693430657	-	AAAGUUUGAUUGAGAUGACAAAUAUUUCUG	313	605	2809	196	198	221	355	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4561521-4561940	Cluster_72	Pocillopora_meandrina_HIv1___Sc0000000	4561521	4561940	420	158	61	0.006329113924050633	-	GUUCCGGGGAACUUGCCGUU	31	83	1	28	30	13	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4565453-4566337	Cluster_73	Pocillopora_meandrina_HIv1___Sc0000000	4565453	4566337	885	681	303	0.0881057268722467	-	UUAUAGCAAACAAAUACAUCAUCCUGGA	54	10	627	3	11	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4595761-4596188	Cluster_74	Pocillopora_meandrina_HIv1___Sc0000000	4595761	4596188	428	210	120	0.7333333333333333	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	10	2	199	0	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4616213-4616622	Cluster_75	Pocillopora_meandrina_HIv1___Sc0000000	4616213	4616622	410	161	70	0.5031055900621118	.	UCGAUUCCACCGAAAGAAAUAACCUGUGA	22	17	126	5	4	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4754952-4755436	Cluster_76	Pocillopora_meandrina_HIv1___Sc0000000	4754952	4755436	485	40027	298	2.4983136382941515e-05	-	GUAGUCGUGGCCGAGUGG	12921	39584	57	135	47	87	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4905179-4905809	Cluster_77	Pocillopora_meandrina_HIv1___Sc0000000	4905179	4905809	631	257	161	0.7003891050583657	.	UGCAAUUGCGUGAUUUAAGUAAAAUGUUC	12	13	195	9	4	17	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5011888-5012317	Cluster_78	Pocillopora_meandrina_HIv1___Sc0000000	5011888	5012317	430	239	52	0.99581589958159	+	UGAUCAAUUUGUGAAUGUCUGCACACCACU	80	0	233	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5114054-5114478	Cluster_79	Pocillopora_meandrina_HIv1___Sc0000000	5114054	5114478	425	213	119	0.9530516431924883	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	24	0	199	1	3	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5114800-5115279	Cluster_80	Pocillopora_meandrina_HIv1___Sc0000000	5114800	5115279	480	303	122	0.9240924092409241	+	UCCAAUCACACACAGUUCUCCUGCGGC	71	3	286	3	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5115363-5116268	Cluster_81	Pocillopora_meandrina_HIv1___Sc0000000	5115363	5116268	906	2251	411	0.9689027099067081	+	UAGGCAUUUGUCAGCAUUGAGAGUUAAG	317	17	2172	6	6	18	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5116660-5117931	Cluster_82	Pocillopora_meandrina_HIv1___Sc0000000	5116660	5117931	1272	1213	471	0.9291014014839242	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	86	13	1163	1	4	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5237977-5238405	Cluster_83	Pocillopora_meandrina_HIv1___Sc0000000	5237977	5238405	429	385	52	0.005194805194805195	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	288	0	379	1	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5304149-5304689	Cluster_84	Pocillopora_meandrina_HIv1___Sc0000000	5304149	5304689	541	1516	480	1.0	+	GUGCCUUGAAACUAUCUCUACUGUUCA	229	429	805	67	90	46	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5624826-5625249	Cluster_85	Pocillopora_meandrina_HIv1___Sc0000000	5624826	5625249	424	130	20	1.0	+	UUUGAACUCCUAAGAUCUGAUUGU	70	0	5	1	2	2	120	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5724791-5725218	Cluster_86	Pocillopora_meandrina_HIv1___Sc0000000	5724791	5725218	428	184	70	0.005434782608695652	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	28	4	174	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6035690-6037539	Cluster_87	Pocillopora_meandrina_HIv1___Sc0000000	6035690	6037539	1850	17898	2645	0.10056989607777406	-	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3137	319	15801	169	95	224	1290	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6038529-6040213	Cluster_88	Pocillopora_meandrina_HIv1___Sc0000000	6038529	6040213	1685	2035	841	0.8181818181818182	+	UCUAACGCGUUUGUCUGACAUCCCUUU	131	45	1818	23	34	29	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6054442-6055284	Cluster_89	Pocillopora_meandrina_HIv1___Sc0000000	6054442	6055284	843	2327	244	0.9922647185217017	+	UCCUCUUGGUAAGACAUAGUUCUGUAAACUU	584	9	2306	2	3	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6072268-6072713	Cluster_90	Pocillopora_meandrina_HIv1___Sc0000000	6072268	6072713	446	9755	986	0.997027165556125	+	AUGUGAUUUCUGCCCAGUGCUCU	290	4729	1374	1091	883	1080	598	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6175141-6175560	Cluster_91	Pocillopora_meandrina_HIv1___Sc0000000	6175141	6175560	420	1045	64	1.0	+	CUCUGUCUCUGUCCGU	219	1045	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6176478-6176897	Cluster_92	Pocillopora_meandrina_HIv1___Sc0000000	6176478	6176897	420	106	6	0.0	-	UGAAAAUCUUUGCUCUGACG	52	54	0	46	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6300017-6300437	Cluster_93	Pocillopora_meandrina_HIv1___Sc0000000	6300017	6300437	421	278	84	0.6762589928057554	.	AUCGAUCGCGUUUCUCUUGC	76	221	4	49	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6432068-6432496	Cluster_94	Pocillopora_meandrina_HIv1___Sc0000000	6432068	6432496	429	1120	153	0.9991071428571429	+	UCAGCUCUUUCUAACUCUGCAAUUUGAG	270	1	1109	2	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6432523-6433169	Cluster_95	Pocillopora_meandrina_HIv1___Sc0000000	6432523	6433169	647	758	300	0.895778364116095	+	UGAAAUACUUGUUCUUUUCCCUGGUUUGCC	85	3	708	8	10	8	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6523200-6523620	Cluster_96	Pocillopora_meandrina_HIv1___Sc0000000	6523200	6523620	421	82	25	0.9634146341463414	+	UGCGACAAACGAAGAGUAGAAAGUUUCUAC	41	6	68	3	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6579795-6580209	Cluster_97	Pocillopora_meandrina_HIv1___Sc0000000	6579795	6580209	415	83	11	0.0	-	GGAUCGGCCGUGGAUU	35	83	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6650162-6650578	Cluster_98	Pocillopora_meandrina_HIv1___Sc0000000	6650162	6650578	417	205	14	0.9902439024390244	+	GCCGGUCGUUGGGGCGA	157	204	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6755647-6756061	Cluster_99	Pocillopora_meandrina_HIv1___Sc0000000	6755647	6756061	415	102	16	0.9705882352941176	+	GUGGAAGGUAGGUCC	81	93	6	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6781587-6782077	Cluster_100	Pocillopora_meandrina_HIv1___Sc0000000	6781587	6782077	491	556	325	0.9928057553956835	+	CUUCGUUGAGAAUAGACGCCUGA	9	179	195	53	48	43	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6784342-6785024	Cluster_101	Pocillopora_meandrina_HIv1___Sc0000000	6784342	6785024	683	1714	758	0.9982497082847142	+	GAAGAGAAAAAGAACUCGUUGCU	104	580	450	208	118	268	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6785838-6786298	Cluster_102	Pocillopora_meandrina_HIv1___Sc0000000	6785838	6786298	461	338	167	0.9970414201183432	+	CUUGAAGAAAGACUGGUCUCCA	26	167	52	22	61	15	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6786580-6787211	Cluster_103	Pocillopora_meandrina_HIv1___Sc0000000	6786580	6787211	632	1089	665	0.9990817263544536	+	GACGACAACGAGCUCGGU	16	330	447	92	62	72	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6820854-6821271	Cluster_104	Pocillopora_meandrina_HIv1___Sc0000000	6820854	6821271	418	197	146	0.9847715736040609	+	GAUGUGCGACGACCUCUGAGGAACA	6	84	50	23	18	17	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6863950-6864369	Cluster_105	Pocillopora_meandrina_HIv1___Sc0000000	6863950	6864369	420	207	133	0.9951690821256038	+	CUUGUGUCAACUAAACUCCAACA	9	58	80	21	13	30	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6905074-6905503	Cluster_106	Pocillopora_meandrina_HIv1___Sc0000000	6905074	6905503	430	435	107	0.03908045977011494	-	AUCUUCUGAAUCAAGAAAAAAGAGGCUGG	113	2	419	1	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6905904-6906371	Cluster_107	Pocillopora_meandrina_HIv1___Sc0000000	6905904	6906371	468	3434	164	0.0037856726849155504	-	GAUCCAACAAGAACAAUAUGUGCUGACUA	1130	3	3427	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7028932-7029345	Cluster_108	Pocillopora_meandrina_HIv1___Sc0000000	7028932	7029345	414	107	33	0.9906542056074766	+	UGCUGCCGGUCGUGGG	27	93	8	2	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7029852-7030270	Cluster_109	Pocillopora_meandrina_HIv1___Sc0000000	7029852	7030270	419	4667	151	0.0017141632740518534	-	CCUCUACUUGACCUCAUU	1290	4667	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7039343-7040274	Cluster_110	Pocillopora_meandrina_HIv1___Sc0000000	7039343	7040274	932	3874	682	0.0002581311306143521	-	CAGGGGCCAUCUGAUGGAU	264	1535	1705	136	162	155	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7040841-7041265	Cluster_111	Pocillopora_meandrina_HIv1___Sc0000000	7040841	7041265	425	244	106	0.004098360655737705	-	UCAAGUCUGAGCAUG	15	72	97	8	6	32	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7041283-7041776	Cluster_112	Pocillopora_meandrina_HIv1___Sc0000000	7041283	7041776	494	6746	427	0.0004447079750963534	-	GCUGGAUGAUGAGACU	3482	4854	948	193	215	276	260	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7041807-7042290	Cluster_113	Pocillopora_meandrina_HIv1___Sc0000000	7041807	7042290	484	3310	443	0.0	-	CUGAAUGAAAACAGAGUCUGAGCAGU	430	1036	1222	147	259	250	396	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7042332-7042805	Cluster_114	Pocillopora_meandrina_HIv1___Sc0000000	7042332	7042805	474	645	147	0.0031007751937984496	-	UCUUUGUCUGACCAGU	29	312	258	15	21	8	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7045245-7045661	Cluster_115	Pocillopora_meandrina_HIv1___Sc0000000	7045245	7045661	417	435	9	0.0	-	ACUUGAAGCGGUUGGGU	247	434	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7100067-7100477	Cluster_116	Pocillopora_meandrina_HIv1___Sc0000000	7100067	7100477	411	315	227	0.9873015873015873	+	GUGGACUGAGCUUAAAUAGU	13	111	90	30	26	23	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7205683-7206107	Cluster_117	Pocillopora_meandrina_HIv1___Sc0000000	7205683	7206107	425	1004	73	1.0	+	UUGCGUUGCACAUGUGAACUAGGC	277	28	82	69	53	358	414	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7584506-7585242	Cluster_118	Pocillopora_meandrina_HIv1___Sc0000000	7584506	7585242	737	3895	588	0.9810012836970475	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	800	15	3816	4	4	13	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7586368-7586860	Cluster_119	Pocillopora_meandrina_HIv1___Sc0000000	7586368	7586860	493	542	241	0.7435424354243543	.	UGAAUCCACCACACUUGAAUUUAGACCCA	40	25	481	3	5	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7587279-7588109	Cluster_120	Pocillopora_meandrina_HIv1___Sc0000000	7587279	7588109	831	389	207	0.9485861182519281	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	25	6	358	3	2	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7588431-7588910	Cluster_121	Pocillopora_meandrina_HIv1___Sc0000000	7588431	7588910	480	313	128	0.9329073482428115	+	UCCAAUCACACACAGUUCUCCUGCGGC	65	1	305	1	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7588994-7589421	Cluster_122	Pocillopora_meandrina_HIv1___Sc0000000	7588994	7589421	428	150	50	0.9333333333333333	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	59	0	145	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7590291-7592205	Cluster_123	Pocillopora_meandrina_HIv1___Sc0000000	7590291	7592205	1915	3392	1167	0.8637971698113207	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	90	41	3137	17	21	47	129	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7592666-7593548	Cluster_124	Pocillopora_meandrina_HIv1___Sc0000000	7592666	7593548	883	4619	774	0.85256549036588	+	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	627	28	4388	44	13	57	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7593750-7594799	Cluster_125	Pocillopora_meandrina_HIv1___Sc0000000	7593750	7594799	1050	4832	1086	0.9147350993377483	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	483	91	4504	19	27	66	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7594848-7595397	Cluster_126	Pocillopora_meandrina_HIv1___Sc0000000	7594848	7595397	550	4244	589	0.5954288407163054	.	ACAAGACAGAAUUCCAGCUGAUACAGA	502	44	3930	11	34	86	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7596727-7597157	Cluster_127	Pocillopora_meandrina_HIv1___Sc0000000	7596727	7597157	431	905	93	0.008839779005524863	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	541	1	884	2	1	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7598683-7600443	Cluster_128	Pocillopora_meandrina_HIv1___Sc0000000	7598683	7600443	1761	2189	724	0.21425308359981726	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	88	32	2012	5	6	42	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7600923-7601349	Cluster_129	Pocillopora_meandrina_HIv1___Sc0000000	7600923	7601349	427	147	67	0.027210884353741496	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	17	2	143	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7601404-7602137	Cluster_130	Pocillopora_meandrina_HIv1___Sc0000000	7601404	7602137	734	1177	334	0.07306711979609176	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	142	6	1111	5	5	27	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7609392-7609807	Cluster_131	Pocillopora_meandrina_HIv1___Sc0000000	7609392	7609807	416	109	55	1.0	+	UGACGAUUUUCGCGGCUCGAUUUUGU	14	0	108	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7656753-7658490	Cluster_132	Pocillopora_meandrina_HIv1___Sc0000000	7656753	7658490	1738	2769	1114	0.04405922715781871	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	87	18	2622	12	26	49	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7697508-7697937	Cluster_133	Pocillopora_meandrina_HIv1___Sc0000000	7697508	7697937	430	346	31	1.0	+	UAGAGUGUCAAACCACGAUGGAUGAUGAUC	194	2	335	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7920515-7920932	Cluster_134	Pocillopora_meandrina_HIv1___Sc0000000	7920515	7920932	418	1728	102	0.005208333333333333	-	AGCUGUGACCCUCGGU	290	1724	2	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8103238-8103666	Cluster_135	Pocillopora_meandrina_HIv1___Sc0000000	8103238	8103666	429	268	37	1.0	+	AUAUUUACGACGAGGAGGAACGAUUUGAA	104	7	259	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8155944-8156371	Cluster_136	Pocillopora_meandrina_HIv1___Sc0000000	8155944	8156371	428	93	16	0.978494623655914	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	1	90	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8310086-8310514	Cluster_137	Pocillopora_meandrina_HIv1___Sc0000000	8310086	8310514	429	201	54	0.009950248756218905	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	76	0	198	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8311015-8312237	Cluster_138	Pocillopora_meandrina_HIv1___Sc0000000	8311015	8312237	1223	1537	298	0.09238776837996096	-	UCUAUCCCACCUGUAAUGAAAAAAUCUUUG	415	18	1476	15	1	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8426708-8427191	Cluster_139	Pocillopora_meandrina_HIv1___Sc0000000	8426708	8427191	484	397	173	0.0	-	UGUGUAGUAAACGCCAGAAACAUGA	20	117	126	41	28	35	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8427562-8428099	Cluster_140	Pocillopora_meandrina_HIv1___Sc0000000	8427562	8428099	538	848	294	0.0023584905660377358	-	UCUCACCUUGAAACUGGAAUGGCAAGCUU	154	152	527	31	24	50	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8453408-8453822	Cluster_141	Pocillopora_meandrina_HIv1___Sc0000000	8453408	8453822	415	118	7	0.00847457627118644	-	GUCUGGAGUCUCGGU	88	117	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8499615-8500030	Cluster_142	Pocillopora_meandrina_HIv1___Sc0000000	8499615	8500030	416	97	13	1.0	+	AGUGUGCUCUUAACCA	64	94	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8608677-8609097	Cluster_143	Pocillopora_meandrina_HIv1___Sc0000000	8608677	8609097	421	400	75	0.995	+	AAGAAAGAAGACCCUGGGAAU	103	219	5	152	11	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8611591-8612003	Cluster_144	Pocillopora_meandrina_HIv1___Sc0000000	8611591	8612003	413	120	81	1.0	+	UUUAAUGCUGUGUGAACAAGGA	5	43	39	4	11	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8734505-8734916	Cluster_145	Pocillopora_meandrina_HIv1___Sc0000000	8734505	8734916	412	237	168	0.012658227848101266	-	CCUCAAGGACGUGCAGGAU	7	94	94	14	13	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8743608-8744021	Cluster_146	Pocillopora_meandrina_HIv1___Sc0000000	8743608	8744021	414	302	206	0.026490066225165563	-	GACGUGAAAAAGAACGAGGA	9	83	138	23	20	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8940693-8941183	Cluster_147	Pocillopora_meandrina_HIv1___Sc0000000	8940693	8941183	491	1973	287	0.2002027369488089	.	UCGACAACUUUCAGCCACAAAUCGUGCA	420	124	1672	21	19	100	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9094812-9095227	Cluster_148	Pocillopora_meandrina_HIv1___Sc0000000	9094812	9095227	416	513	29	0.9961013645224172	+	AGUGCGCUCUUAACU	302	513	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9171916-9172332	Cluster_149	Pocillopora_meandrina_HIv1___Sc0000000	9171916	9172332	417	121	34	0.0	-	AACUGUGACCCUCGGGUA	29	108	6	4	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9256539-9256969	Cluster_150	Pocillopora_meandrina_HIv1___Sc0000000	9256539	9256969	431	612	119	0.06862745098039216	-	UUAACCGUUAUAGUUUUGACUUGAAUAU	104	1	534	2	42	1	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9257154-9257837	Cluster_151	Pocillopora_meandrina_HIv1___Sc0000000	9257154	9257837	684	4844	431	0.026424442609413706	-	CUGUGAACGAUGCCCUAGAUGUGGA	713	1189	2949	39	216	257	194	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9265055-9265482	Cluster_152	Pocillopora_meandrina_HIv1___Sc0000000	9265055	9265482	428	284	68	0.9471830985915493	+	UAUGAUAUCACUGUGGAGCGAGG	72	10	131	7	5	104	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9273662-9274078	Cluster_153	Pocillopora_meandrina_HIv1___Sc0000000	9273662	9274078	417	96	17	0.96875	+	CGGCCUGAAAAAAAAAA	75	87	6	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9279901-9280374	Cluster_154	Pocillopora_meandrina_HIv1___Sc0000000	9279901	9280374	474	533	163	0.9962476547842402	+	UUCCAAUGAUGAGGCAAAUCCAACUCU	63	90	386	15	12	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9284299-9284771	Cluster_155	Pocillopora_meandrina_HIv1___Sc0000000	9284299	9284771	473	564	173	0.9929078014184397	+	UUUCAGUGAUGAGUCAAAUCCAACUCCUAUU	68	85	355	23	52	25	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9285767-9286194	Cluster_156	Pocillopora_meandrina_HIv1___Sc0000000	9285767	9286194	428	305	61	1.0	+	GGAAUAAUAAUCGUGAUAACUGAGGAAU	81	92	183	7	6	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9286599-9287030	Cluster_157	Pocillopora_meandrina_HIv1___Sc0000000	9286599	9287030	432	896	200	0.9977678571428571	+	GAAACUGUAACUGACUGAGGAAA	132	241	302	73	79	161	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9425068-9425482	Cluster_158	Pocillopora_meandrina_HIv1___Sc0000000	9425068	9425482	415	119	21	0.8823529411764706	+	UCGGGCUGAGACUUA	73	107	9	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9440858-9441690	Cluster_159	Pocillopora_meandrina_HIv1___Sc0000000	9440858	9441690	833	152965	5293	0.9999411630111463	+	UCCUUCCGGCCGGUCGUCGAC	10705	114198	5904	20279	6929	3709	1946	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9460512-9460942	Cluster_160	Pocillopora_meandrina_HIv1___Sc0000000	9460512	9460942	431	873	166	1.0	+	AACGAAAGUAAUGAGAUGGAGCUGAUA	225	8	850	3	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9465183-9465611	Cluster_161	Pocillopora_meandrina_HIv1___Sc0000000	9465183	9465611	429	602	64	0.9451827242524917	+	GGGGUGGACACUGUUUCGGAGAAGACUGC	138	63	501	3	28	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9797403-9798674	Cluster_162	Pocillopora_meandrina_HIv1___Sc0000000	9797403	9798674	1272	3422	701	0.10403272939801286	-	UGCGUGUAGAGGUAACUAAAGUCCCUUU	388	169	3039	19	32	91	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9799659-9800082	Cluster_163	Pocillopora_meandrina_HIv1___Sc0000000	9799659	9800082	424	115	40	0.19130434782608696	-	UGUUACAAAACCAUUAGAACUAUCAGUU	30	0	97	1	2	0	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9800682-9801089	Cluster_164	Pocillopora_meandrina_HIv1___Sc0000000	9800682	9801089	408	100	32	0.24	.	UGUGAAUCAAUGGCUGAACUUUCCUUAUA	24	1	92	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9803050-9803772	Cluster_165	Pocillopora_meandrina_HIv1___Sc0000000	9803050	9803772	723	361	143	0.055401662049861494	-	UCACUGAUGUCGGAUGUCUGAGAUGCAUC	63	7	347	3	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9828155-9828582	Cluster_166	Pocillopora_meandrina_HIv1___Sc0000000	9828155	9828582	428	141	32	0.05673758865248227	-	UUGAUCUCUAUGGUUUGAAAGGUUAUGG	56	7	129	3	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9842833-9843262	Cluster_167	Pocillopora_meandrina_HIv1___Sc0000000	9842833	9843262	430	143	36	0.0	-	UCUAAGACAAUAAUUGGUACUGCAACGAGU	34	0	143	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9853689-9855999	Cluster_168	Pocillopora_meandrina_HIv1___Sc0000000	9853689	9855999	2311	16273	2139	0.013457875007681435	-	UAAUUCUUCCUUGAGCUGUGUUUUAAGA	922	99	15810	28	121	69	146	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9856063-9856639	Cluster_169	Pocillopora_meandrina_HIv1___Sc0000000	9856063	9856639	577	1201	361	0.07577019150707744	-	UGUUUCUGCGGUACGUGUCACCAUUGGC	100	71	1056	6	4	17	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9857383-9857809	Cluster_170	Pocillopora_meandrina_HIv1___Sc0000000	9857383	9857809	427	112	50	0.09821428571428571	-	UGUAAUCUUCCGGUUGGUCUAGUAAACC	15	6	99	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9878202-9878692	Cluster_171	Pocillopora_meandrina_HIv1___Sc0000000	9878202	9878692	491	1187	193	0.017691659646166806	-	UCCGUUCUGUAAUUGUUUCGAAUGCCUUC	149	6	1150	0	1	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9884241-9884668	Cluster_172	Pocillopora_meandrina_HIv1___Sc0000000	9884241	9884668	428	159	49	0.018867924528301886	-	UGGGAAUAUCUGGUUCUUCGUGAAGAUC	45	5	106	0	0	44	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9887131-9887541	Cluster_173	Pocillopora_meandrina_HIv1___Sc0000000	9887131	9887541	411	213	99	0.018779342723004695	-	UAAUAUGUGAUGAACUUA	40	71	137	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9889894-9890324	Cluster_174	Pocillopora_meandrina_HIv1___Sc0000000	9889894	9890324	431	134	10	0.05223880597014925	-	UCAGCUCCAUAUCUUGUUUAACAUCUUAAAC	92	0	131	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9898243-9898662	Cluster_175	Pocillopora_meandrina_HIv1___Sc0000000	9898243	9898662	420	172	80	0.12790697674418605	-	UUCGCGUCUGAAGCUGUUAG	34	79	15	19	26	31	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9904284-9904712	Cluster_176	Pocillopora_meandrina_HIv1___Sc0000000	9904284	9904712	429	399	48	0.9974937343358395	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	297	2	395	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9912312-9913768	Cluster_177	Pocillopora_meandrina_HIv1___Sc0000000	9912312	9913768	1457	1470	594	0.8700680272108844	+	UGCACUCUUCAUAGAUCCCUAAAGGAACGG	54	18	1278	10	14	18	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9920127-9920554	Cluster_178	Pocillopora_meandrina_HIv1___Sc0000000	9920127	9920554	428	90	30	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	43	0	90	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9924478-9924909	Cluster_179	Pocillopora_meandrina_HIv1___Sc0000000	9924478	9924909	432	389	150	0.07455012853470437	-	UUGGUGUGUUCAAGUAUCUUUGAUUCUGA	35	1	377	0	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9931068-9932750	Cluster_180	Pocillopora_meandrina_HIv1___Sc0000000	9931068	9932750	1683	2036	834	0.17927308447937132	-	UCUAACGCGUUUGUCUGACAUCCCUUU	140	40	1822	15	47	32	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9933750-9935597	Cluster_181	Pocillopora_meandrina_HIv1___Sc0000000	9933750	9935597	1848	18496	2888	0.8988429930795848	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3017	375	16219	238	108	303	1253	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10012374-10012789	Cluster_182	Pocillopora_meandrina_HIv1___Sc0000000	10012374	10012789	416	94	7	0.010638297872340425	-	AUCCCUCCGGUGCCUCAA	44	94	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10052622-10053049	Cluster_183	Pocillopora_meandrina_HIv1___Sc0000000	10052622	10053049	428	383	83	0.10966057441253264	-	UGUAAUCGCAUGUAGUUGCUUCUGUCUC	92	35	314	12	3	19	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10128424-10128839	Cluster_184	Pocillopora_meandrina_HIv1___Sc0000000	10128424	10128839	416	81	8	0.037037037037037035	-	AUGGUCGAGGUGAGGG	58	81	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10181669-10182095	Cluster_185	Pocillopora_meandrina_HIv1___Sc0000000	10181669	10182095	427	158	37	0.012658227848101266	-	UGGGUUGACUGAAUUUGUGAGGAAGCUG	24	1	144	0	0	12	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10361747-10362173	Cluster_186	Pocillopora_meandrina_HIv1___Sc0000000	10361747	10362173	427	179	71	0.9776536312849162	+	UACAAACAACAGAACGUUCGAACGGCU	35	10	163	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10377202-10381486	Cluster_187	Pocillopora_meandrina_HIv1___Sc0000000	10377202	10381486	4285	12511	3868	0.9276636559827351	+	UGACUCUUCAAUCUCUGAAACGACUGCUC	531	163	11577	39	67	236	429	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10424158-10424581	Cluster_188	Pocillopora_meandrina_HIv1___Sc0000000	10424158	10424581	424	130	14	1.0	+	UUAACUGGUAGUCAUGACGUCUCC	59	5	2	1	1	6	115	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10531083-10531491	Cluster_189	Pocillopora_meandrina_HIv1___Sc0000000	10531083	10531491	409	141	83	0.1276595744680851	-	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	10	0	125	0	3	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10531934-10532625	Cluster_190	Pocillopora_meandrina_HIv1___Sc0000000	10531934	10532625	692	458	238	0.29912663755458513	.	UCGUAGAAAAUUUAGAAGGAGUUGAAGUU	21	9	399	3	4	17	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10532826-10533252	Cluster_191	Pocillopora_meandrina_HIv1___Sc0000000	10532826	10533252	427	130	83	0.09230769230769231	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	16	2	120	1	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10534042-10534763	Cluster_192	Pocillopora_meandrina_HIv1___Sc0000000	10534042	10534763	722	311	180	0.09646302250803858	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	20	3	290	1	1	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10540694-10541121	Cluster_193	Pocillopora_meandrina_HIv1___Sc0000000	10540694	10541121	428	84	22	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10543779-10544200	Cluster_194	Pocillopora_meandrina_HIv1___Sc0000000	10543779	10544200	422	228	141	0.8377192982456141	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	17	5	214	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10544222-10544652	Cluster_195	Pocillopora_meandrina_HIv1___Sc0000000	10544222	10544652	431	324	140	0.941358024691358	+	UGAUAACUGUACUCUUGAAAUUCAUCG	23	1	308	2	0	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10553046-10553473	Cluster_196	Pocillopora_meandrina_HIv1___Sc0000000	10553046	10553473	428	167	35	0.005988023952095809	-	UGGGUUGACUGAAUUUGUGAGGAAGCUGA	30	2	149	1	1	14	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10685159-10685840	Cluster_197	Pocillopora_meandrina_HIv1___Sc0000000	10685159	10685840	682	750	194	0.008	-	UGUACUGAACUCUACCAGCGAA	214	23	475	12	218	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10686623-10687051	Cluster_198	Pocillopora_meandrina_HIv1___Sc0000000	10686623	10687051	429	363	79	0.9256198347107438	+	CCGUGUCUUAAGAAACAAAGUUGU	92	5	195	0	2	20	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10700190-10700605	Cluster_199	Pocillopora_meandrina_HIv1___Sc0000000	10700190	10700605	416	788	33	0.0	-	CCAUUAGCGAGGACU	237	788	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10707707-10708135	Cluster_200	Pocillopora_meandrina_HIv1___Sc0000000	10707707	10708135	429	270	61	0.018518518518518517	-	UCUAAUGCAGUGGCACAGAACCUCGGGGA	68	2	264	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10714506-10714951	Cluster_201	Pocillopora_meandrina_HIv1___Sc0000000	10714506	10714951	446	558	159	0.03225806451612903	-	CGGACCUCAGAUCAG	143	299	256	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10734393-10734815	Cluster_202	Pocillopora_meandrina_HIv1___Sc0000000	10734393	10734815	423	77	15	1.0	+	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	36	0	71	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10786268-10787808	Cluster_203	Pocillopora_meandrina_HIv1___Sc0000000	10786268	10787808	1541	3127	887	0.9756955548448992	+	UGUACGCGUGGAUCAUCUUGUUGAGUG	115	38	2908	17	16	82	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10788018-10788448	Cluster_204	Pocillopora_meandrina_HIv1___Sc0000000	10788018	10788448	431	708	245	0.9322033898305084	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	133	26	608	20	4	13	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10789452-10790491	Cluster_205	Pocillopora_meandrina_HIv1___Sc0000000	10789452	10790491	1040	808	363	0.9727722772277227	+	UAACAUCUCUCUUUCCGACUUUAACAGC	47	5	786	3	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10790631-10791624	Cluster_206	Pocillopora_meandrina_HIv1___Sc0000000	10790631	10791624	994	1157	468	0.9170267934312878	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	79	17	1077	2	1	12	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10791743-10792235	Cluster_207	Pocillopora_meandrina_HIv1___Sc0000000	10791743	10792235	493	488	267	0.7868852459016393	.	UCCGGUACAAAUUUUCCCUGCAUACUUAGA	15	7	432	1	5	6	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10804971-10805394	Cluster_208	Pocillopora_meandrina_HIv1___Sc0000000	10804971	10805394	424	119	63	0.9915966386554622	+	UCAUUAGUCUGGACAUGCCCUGACAUCUCC	15	1	115	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10806848-10808466	Cluster_209	Pocillopora_meandrina_HIv1___Sc0000000	10806848	10808466	1619	4175	1063	0.8349700598802395	+	UGUGACUGUUAAAGAUACCUAGGAGUG	352	58	3639	21	21	149	287	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10811915-10812348	Cluster_210	Pocillopora_meandrina_HIv1___Sc0000000	10811915	10812348	434	338	178	0.5295857988165681	.	AUACACUAUAGGCGGUGACAAGCAACCAAC	21	8	307	1	2	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10812968-10813461	Cluster_211	Pocillopora_meandrina_HIv1___Sc0000000	10812968	10813461	494	5845	335	0.9941830624465355	+	UGAGACGAAACCCGACUACAGAAUAGCU	1474	14	5613	1	9	8	200	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10856559-10857207	Cluster_212	Pocillopora_meandrina_HIv1___Sc0000000	10856559	10857207	649	1258	222	0.800476947535771	+	UGCAUGACAAUUUUGGAGGAGAACCACCCA	419	27	1184	8	10	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10906504-10906934	Cluster_213	Pocillopora_meandrina_HIv1___Sc0000000	10906504	10906934	431	642	113	0.9890965732087228	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	223	11	625	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10929261-10929684	Cluster_214	Pocillopora_meandrina_HIv1___Sc0000000	10929261	10929684	424	159	52	0.3018867924528302	.	AACCAUCUCAUGGAUCAGAACCAG	59	3	51	0	18	1	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10986267-10986682	Cluster_215	Pocillopora_meandrina_HIv1___Sc0000000	10986267	10986682	416	103	25	0.9611650485436893	+	GCUCAUCGACCUCAUU	39	99	3	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11008650-11009079	Cluster_216	Pocillopora_meandrina_HIv1___Sc0000000	11008650	11009079	430	322	36	1.0	+	UGACUGUGCUAAGUCAUUUGCUGCAAAUGA	137	7	302	1	3	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11039301-11039720	Cluster_217	Pocillopora_meandrina_HIv1___Sc0000000	11039301	11039720	420	171	6	1.0	+	AGAAGUGGAAAGAAAAUUUU	142	171	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11041565-11042739	Cluster_218	Pocillopora_meandrina_HIv1___Sc0000000	11041565	11042739	1175	938	378	0.9371002132196162	+	UAAGUGCGCUCUCAUGUAGAUAUAUGGG	93	9	863	3	9	22	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11043025-11043455	Cluster_219	Pocillopora_meandrina_HIv1___Sc0000000	11043025	11043455	431	473	182	0.9302325581395349	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	68	3	452	1	1	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11043472-11043898	Cluster_220	Pocillopora_meandrina_HIv1___Sc0000000	11043472	11043898	427	171	92	0.9181286549707602	+	UGAACUUCUCGGCUCCAAACACUAUGG	39	4	158	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11043908-11044443	Cluster_221	Pocillopora_meandrina_HIv1___Sc0000000	11043908	11044443	536	428	197	0.8644859813084113	+	UUUGUCGUGAUCUUUCACUGCUUCUUGC	43	5	384	4	1	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11044450-11046447	Cluster_222	Pocillopora_meandrina_HIv1___Sc0000000	11044450	11046447	1998	4882	1598	0.8777140516181893	+	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	371	34	4542	33	31	71	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11062624-11063039	Cluster_223	Pocillopora_meandrina_HIv1___Sc0000000	11062624	11063039	416	258	22	0.9961240310077519	+	GAAUCGGCCGUGGAC	82	246	12	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11067582-11068009	Cluster_224	Pocillopora_meandrina_HIv1___Sc0000000	11067582	11068009	428	158	59	0.9936708860759493	+	UAUCAAGUAGAGAUGUCUGAGCCCGAGG	19	0	156	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11068926-11069353	Cluster_225	Pocillopora_meandrina_HIv1___Sc0000000	11068926	11069353	428	195	108	0.8974358974358975	+	UGUUCUUGUAGUCUUUUAACAGCUUGUU	24	3	181	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11070468-11070893	Cluster_226	Pocillopora_meandrina_HIv1___Sc0000000	11070468	11070893	426	154	81	0.8441558441558441	+	UAGUGACCGUAUCUUAAACUCCCUAUUA	41	5	142	3	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11071238-11071733	Cluster_227	Pocillopora_meandrina_HIv1___Sc0000000	11071238	11071733	496	499	196	0.8937875751503006	+	UGAAAUAACUAAGUCCAGAAUAUUCUGAUU	26	8	469	0	2	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11077717-11078147	Cluster_228	Pocillopora_meandrina_HIv1___Sc0000000	11077717	11078147	431	225	91	0.9422222222222222	+	UGAAUAGUGUGUAUAUUGAAAGGUCUCGGUC	36	0	212	4	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11489850-11490268	Cluster_229	Pocillopora_meandrina_HIv1___Sc0000000	11489850	11490268	419	84	28	0.0	-	GACGGACUGGGAGAGCUCG	10	30	33	3	10	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11542819-11543245	Cluster_230	Pocillopora_meandrina_HIv1___Sc0000000	11542819	11543245	427	233	131	0.8583690987124464	+	UGAGUCGAGGUUAUUCACAAUACGAGC	30	6	205	1	4	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11543483-11544140	Cluster_231	Pocillopora_meandrina_HIv1___Sc0000000	11543483	11544140	658	1085	327	0.9271889400921659	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	97	5	1043	3	3	15	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11544360-11545805	Cluster_232	Pocillopora_meandrina_HIv1___Sc0000000	11544360	11545805	1446	1605	714	0.7420560747663552	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	104	17	1448	17	7	24	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11552655-11555295	Cluster_233	Pocillopora_meandrina_HIv1___Sc0000000	11552655	11555295	2641	8802	1922	0.9943194728470802	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1189	59	8597	19	18	33	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11557735-11558202	Cluster_234	Pocillopora_meandrina_HIv1___Sc0000000	11557735	11558202	468	229	85	1.0	+	UUCAUAUCUAGUAUCAUUCUGAAAAUUAUU	21	0	221	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11558690-11559293	Cluster_235	Pocillopora_meandrina_HIv1___Sc0000000	11558690	11559293	604	571	176	0.9246935201401051	+	UGAUUGAAACUUGAAGAAGAGCUUGUAAC	60	47	518	1	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11559941-11560371	Cluster_236	Pocillopora_meandrina_HIv1___Sc0000000	11559941	11560371	431	492	115	0.9959349593495935	+	UGUAAUCUAGAUCUUUGCUUGUAUCGGCAC	95	4	484	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11561261-11561727	Cluster_237	Pocillopora_meandrina_HIv1___Sc0000000	11561261	11561727	467	525	214	0.9961904761904762	+	UCACACGUGCUUGAACUUGUCUUUUAAGGA	30	3	507	1	7	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11566072-11566658	Cluster_238	Pocillopora_meandrina_HIv1___Sc0000000	11566072	11566658	587	608	208	0.9950657894736842	+	UAUUGUUUGCAAAAAGCUCUCUUGACUGC	83	13	572	2	3	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11566681-11567857	Cluster_239	Pocillopora_meandrina_HIv1___Sc0000000	11566681	11567857	1177	3127	563	0.9840102334505916	+	UAGAGCUCUUGUUUUUUCCACACCAAUA	406	37	3002	6	8	20	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11568059-11570378	Cluster_240	Pocillopora_meandrina_HIv1___Sc0000000	11568059	11570378	2320	43866	3442	0.9938220945607076	+	UGGAAACAUCUUCUCUGCCAAUUCCCAUU	2380	1427	39625	135	595	1515	569	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11574178-11574789	Cluster_241	Pocillopora_meandrina_HIv1___Sc0000000	11574178	11574789	612	762	343	0.9068241469816273	+	UCAUCAUAGCUGUCUUUCUCUGCAGAGC	45	20	694	5	8	11	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11576455-11577454	Cluster_242	Pocillopora_meandrina_HIv1___Sc0000000	11576455	11577454	1000	1303	588	0.3415195702225633	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	63	31	1153	3	11	30	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11580662-11581090	Cluster_243	Pocillopora_meandrina_HIv1___Sc0000000	11580662	11581090	429	187	36	1.0	+	UGAGAAGUACAAGCUAUAGAGGACUGUUG	61	1	185	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11583911-11584333	Cluster_244	Pocillopora_meandrina_HIv1___Sc0000000	11583911	11584333	423	89	35	0.9887640449438202	+	UUUAUCCCAACUGGUUACAGGACAUCC	20	2	86	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11584630-11585077	Cluster_245	Pocillopora_meandrina_HIv1___Sc0000000	11584630	11585077	448	382	126	1.0	+	UGGGUGUUGUUCCUGACUCCAAGGGAAGUG	48	12	356	1	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11587332-11587855	Cluster_246	Pocillopora_meandrina_HIv1___Sc0000000	11587332	11587855	524	545	272	0.9431192660550459	+	UUGGAACUUCAGCUGUGAGACGCAGGU	27	10	490	3	3	25	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11588495-11588920	Cluster_247	Pocillopora_meandrina_HIv1___Sc0000000	11588495	11588920	426	332	184	0.9879518072289156	+	UGUUUACUUGCUCUGCUUCUAUCUCUGU	17	1	314	1	4	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11589851-11590275	Cluster_248	Pocillopora_meandrina_HIv1___Sc0000000	11589851	11590275	425	200	95	0.925	+	UACGAUCAGGAUUGUCCACCACACAGA	45	3	175	2	2	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11590462-11591138	Cluster_249	Pocillopora_meandrina_HIv1___Sc0000000	11590462	11591138	677	1187	448	0.966301600673968	+	UUCUUAUCGUCUUCAGUCUCGAAUUCUA	46	19	1098	2	6	12	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11594639-11595517	Cluster_250	Pocillopora_meandrina_HIv1___Sc0000000	11594639	11595517	879	4177	486	0.9932966243715585	+	UCUUCAUUAGGCUUACUGAACUUGACGA	598	28	4081	3	13	13	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11597441-11597856	Cluster_251	Pocillopora_meandrina_HIv1___Sc0000000	11597441	11597856	416	228	117	0.9868421052631579	+	UACAUAGUGUUCUGUUCCCUUUAUAGGAC	15	5	221	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11610279-11610705	Cluster_252	Pocillopora_meandrina_HIv1___Sc0000000	11610279	11610705	427	223	50	1.0	+	UGUUUGUAGGGGCCGAAUGUUUGUGCU	37	1	217	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11611076-11611579	Cluster_253	Pocillopora_meandrina_HIv1___Sc0000000	11611076	11611579	504	641	119	0.9953198127925117	+	UUCCUGUACUGAUUUCCUCAUGUCUUCUGC	127	18	618	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11612226-11612654	Cluster_254	Pocillopora_meandrina_HIv1___Sc0000000	11612226	11612654	429	268	70	0.9850746268656716	+	UUCAACACAUUUUCUUAGUAGUUCUGGGU	87	4	255	0	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11615894-11616321	Cluster_255	Pocillopora_meandrina_HIv1___Sc0000000	11615894	11616321	428	268	126	0.09701492537313433	-	UGUGUACUUACCAUAGCCUCGCUCUGGA	46	13	245	5	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11619882-11620712	Cluster_256	Pocillopora_meandrina_HIv1___Sc0000000	11619882	11620712	831	5557	932	0.8875292423969768	+	UAUUCUCUUCUUUGAUAAUGACUUUGA	869	32	5158	25	43	173	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11630400-11631221	Cluster_257	Pocillopora_meandrina_HIv1___Sc0000000	11630400	11631221	822	737	297	0.8819538670284939	+	UGUGUACUUACCAUAGCCUCGCUCUGGA	52	27	673	14	4	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11635028-11636324	Cluster_258	Pocillopora_meandrina_HIv1___Sc0000000	11635028	11636324	1297	6274	1163	0.9123366273509723	+	UGUUGUGCUUUUUGUUUGUCUUUGAAAA	842	53	5920	17	37	41	206	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11790564-11790980	Cluster_259	Pocillopora_meandrina_HIv1___Sc0000000	11790564	11790980	417	177	88	0.2937853107344633	.	GCUAAGAGGACGGGAACAUCAUUUC	14	15	143	4	7	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11794310-11794869	Cluster_260	Pocillopora_meandrina_HIv1___Sc0000000	11794310	11794869	560	947	409	0.18373812038014783	-	UAAUUUCGUGUUGCUUAAGCUGUUGAUC	88	90	760	45	14	17	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11798273-11798686	Cluster_261	Pocillopora_meandrina_HIv1___Sc0000000	11798273	11798686	414	120	49	0.008333333333333333	-	UGCUACAGAAGUAGAUUGUGUAAUCUGAGC	35	2	114	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11804184-11804611	Cluster_262	Pocillopora_meandrina_HIv1___Sc0000000	11804184	11804611	428	180	87	0.011111111111111112	-	UGAGAUUGAUUGCCUCUGUGGUGUGGAU	31	6	171	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11812161-11812593	Cluster_263	Pocillopora_meandrina_HIv1___Sc0000000	11812161	11812593	433	227	70	0.004405286343612335	-	UGAAUUCUGUCACGAGUAUUAGACUCCAC	67	3	222	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11813263-11815282	Cluster_264	Pocillopora_meandrina_HIv1___Sc0000000	11813263	11815282	2020	4013	1197	0.18739097931721904	-	UGAUACGAGUAGUUGGAUACAAUCUAAACU	278	84	3660	18	39	62	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11816999-11818263	Cluster_265	Pocillopora_meandrina_HIv1___Sc0000000	11816999	11818263	1265	1276	499	0.822884012539185	+	UGUAACUGGUUCACUGCGAUUUUGUAGU	89	15	1135	6	9	33	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11818269-11818788	Cluster_266	Pocillopora_meandrina_HIv1___Sc0000000	11818269	11818788	520	883	272	0.8221970554926388	+	UGAUAUGACCUUCGGCAAAAAACUGGA	86	14	788	2	3	23	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11819718-11820119	Cluster_267	Pocillopora_meandrina_HIv1___Sc0000000	11819718	11820119	402	195	94	0.005128205128205128	-	UGCAAUUCCAGUAGCUUGAGAUUUUCUGA	21	6	186	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11820158-11820585	Cluster_268	Pocillopora_meandrina_HIv1___Sc0000000	11820158	11820585	428	171	80	0.0	-	UGACUUAGCUCGCUGGCAGGAAGAGAUA	15	2	162	0	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11822375-11824220	Cluster_269	Pocillopora_meandrina_HIv1___Sc0000000	11822375	11824220	1846	18023	2729	0.10037174721189591	-	UCGUUCUUUUUCAUACUUCUGAAGCAUU	2972	296	15959	195	94	221	1258	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11825210-11826891	Cluster_270	Pocillopora_meandrina_HIv1___Sc0000000	11825210	11826891	1682	2033	829	0.8032464338416134	+	UCUAACGCGUUUGUCUGACAUCCCUUU	144	39	1807	16	42	35	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11828734-11829306	Cluster_271	Pocillopora_meandrina_HIv1___Sc0000000	11828734	11829306	573	386	189	0.15544041450777202	-	UUCUCCAUCGUGCUCUGAACCAUCGGAGGC	23	19	345	3	3	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11851345-11852170	Cluster_272	Pocillopora_meandrina_HIv1___Sc0000000	11851345	11852170	826	1865	383	0.10402144772117962	-	UGUGAAUUUUUGGAUCAUUGGUUGUGUU	123	4	1815	2	8	7	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11856935-11857353	Cluster_273	Pocillopora_meandrina_HIv1___Sc0000000	11856935	11857353	419	172	81	0.0	-	UGCACAUCUCCUGAAGUCGAAUAUUUUGGC	21	9	158	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11859861-11860838	Cluster_274	Pocillopora_meandrina_HIv1___Sc0000000	11859861	11860838	978	2865	395	0.006980802792321117	-	UCUUUCUCUUCUCGUAGAGACGUGACGU	882	59	2745	18	14	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11860923-11861894	Cluster_275	Pocillopora_meandrina_HIv1___Sc0000000	11860923	11861894	972	4338	586	0.01913324112494237	-	UAAGACAAGCUAUCAUUCCUGCAUUA	928	42	4097	9	67	38	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11862228-11862801	Cluster_276	Pocillopora_meandrina_HIv1___Sc0000000	11862228	11862801	574	971	168	0.08753861997940268	-	UGCAUGUCAUACUUUCUAACAAAGA	161	17	845	12	19	34	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11864344-11864773	Cluster_277	Pocillopora_meandrina_HIv1___Sc0000000	11864344	11864773	430	375	154	0.013333333333333334	-	UGAUCCGAUUUGUAGUGGUUUUCUCCUUU	33	3	366	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11864858-11866061	Cluster_278	Pocillopora_meandrina_HIv1___Sc0000000	11864858	11866061	1204	6578	1403	0.03770142900577683	-	UCAAUAUAUCUUCUUCAAGUAUUCUGGA	579	79	5983	105	72	138	201	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11866699-11867680	Cluster_279	Pocillopora_meandrina_HIv1___Sc0000000	11866699	11867680	982	66822	1592	0.027461015833108858	-	UCCCGAUCGUUGUUAAAGUCUUAGAAACCUU	12716	424	65101	140	525	298	334	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11869195-11869625	Cluster_280	Pocillopora_meandrina_HIv1___Sc0000000	11869195	11869625	431	491	175	0.004073319755600814	-	UACAAAGCUCUCACGAAUUCACAAACAGA	64	3	481	0	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11870083-11871161	Cluster_281	Pocillopora_meandrina_HIv1___Sc0000000	11870083	11871161	1079	1863	686	0.011808910359634998	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	76	41	1757	18	10	14	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11871339-11872211	Cluster_282	Pocillopora_meandrina_HIv1___Sc0000000	11871339	11872211	873	902	413	0.015521064301552107	-	UGCUGAAACGAUUUUGACAGGUUGUCA	69	11	853	3	9	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11872624-11873076	Cluster_283	Pocillopora_meandrina_HIv1___Sc0000000	11872624	11873076	453	892	312	0.004484304932735426	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	96	5	878	1	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11879278-11880568	Cluster_284	Pocillopora_meandrina_HIv1___Sc0000000	11879278	11880568	1291	39143	2965	0.020667807781723425	-	UUUGUAGGCUCUAACAGU	14047	19582	18304	195	264	359	439	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11880663-11881090	Cluster_285	Pocillopora_meandrina_HIv1___Sc0000000	11880663	11881090	428	1218	176	0.019704433497536946	-	UAGUAUCUGAAGUCUUUGUAACACA	430	3	1188	2	8	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11882087-11882516	Cluster_286	Pocillopora_meandrina_HIv1___Sc0000000	11882087	11882516	430	352	172	0.005681818181818182	-	UAUUCCAAUCGUCAGGAAUUUUCCUUCUGU	30	3	340	2	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11882809-11883388	Cluster_287	Pocillopora_meandrina_HIv1___Sc0000000	11882809	11883388	580	552	267	0.02355072463768116	-	UACGAGCACUAUAGGUGGAAGAACGCCAU	19	14	515	9	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11884724-11885487	Cluster_288	Pocillopora_meandrina_HIv1___Sc0000000	11884724	11885487	764	647	208	0.05873261205564142	-	UAAUCCCAGGUCUUGUAUCGUAAUACUUCA	128	2	636	1	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11887649-11888834	Cluster_289	Pocillopora_meandrina_HIv1___Sc0000000	11887649	11888834	1186	2759	813	0.06487857919536064	-	UGUGUAACUUUGAACCUUUCCUUUUGCU	126	30	2605	12	24	28	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11894481-11895204	Cluster_290	Pocillopora_meandrina_HIv1___Sc0000000	11894481	11895204	724	1880	387	0.11170212765957446	-	UGAUAUGAAAGAUUACUUCGACUGAAA	158	206	1576	9	26	33	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11895337-11896747	Cluster_291	Pocillopora_meandrina_HIv1___Sc0000000	11895337	11896747	1411	2532	970	0.19194312796208532	-	UGCAUCGAUUUCCGCUUUGAACUUGUUC	87	52	2175	34	60	79	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11896761-11897212	Cluster_292	Pocillopora_meandrina_HIv1___Sc0000000	11896761	11897212	452	376	174	0.07712765957446809	-	UAGGUUUGUCUUCGAGUCCUAGGACGU	25	5	353	0	2	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11897488-11898268	Cluster_293	Pocillopora_meandrina_HIv1___Sc0000000	11897488	11898268	781	703	232	0.03982930298719772	-	UCUAUGCUAUUAUUCUGUUUCCGACACACU	90	14	670	6	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11902264-11902850	Cluster_294	Pocillopora_meandrina_HIv1___Sc0000000	11902264	11902850	587	1421	348	0.00844475721323012	-	UGGUGUAAUUGUUUCUUCUGGAAACUC	107	114	1003	66	116	67	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12313190-12313604	Cluster_295	Pocillopora_meandrina_HIv1___Sc0000000	12313190	12313604	415	77	2	1.0	+	CCCGUGUCGGAGCCA	76	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12327275-12327687	Cluster_296	Pocillopora_meandrina_HIv1___Sc0000000	12327275	12327687	413	158	122	0.0189873417721519	-	AAGGUUGUGGGUUCGAGUCC	4	88	37	17	7	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12448995-12450060	Cluster_297	Pocillopora_meandrina_HIv1___Sc0000000	12448995	12450060	1066	1600	258	0.53375	.	UGGUUUCAAGACUUCAAGAA	532	640	656	7	18	77	202	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12548228-12548651	Cluster_298	Pocillopora_meandrina_HIv1___Sc0000000	12548228	12548651	424	91	7	0.01098901098901099	-	ACACUGGUGAAGUUUUGGACUACC	54	0	2	0	0	9	80	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12614642-12615056	Cluster_299	Pocillopora_meandrina_HIv1___Sc0000000	12614642	12615056	415	448	9	0.0	-	GGUUGGAUCCGGCCU	436	448	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12682298-12682725	Cluster_300	Pocillopora_meandrina_HIv1___Sc0000000	12682298	12682725	428	194	78	0.9896907216494846	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	4	177	0	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12687759-12688188	Cluster_301	Pocillopora_meandrina_HIv1___Sc0000000	12687759	12688188	430	279	106	0.96415770609319	+	UGGAUUAUCAACUUUCAAUCGCGAGUUAGC	82	14	241	8	1	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12688213-12688640	Cluster_302	Pocillopora_meandrina_HIv1___Sc0000000	12688213	12688640	428	256	111	0.96484375	+	AAGUACAGCAGAAGUCUACCAAAUGUGGA	25	24	218	4	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12688689-12689095	Cluster_303	Pocillopora_meandrina_HIv1___Sc0000000	12688689	12689095	407	116	64	1.0	+	CGAAUCUGGAUUGGCUGAGGCUUUGCA	12	9	97	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12691009-12691558	Cluster_304	Pocillopora_meandrina_HIv1___Sc0000000	12691009	12691558	550	455	173	0.9978021978021978	+	AACAGUGAAGUGCGAAUCUCUAAUGAUCUU	82	36	398	5	7	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12762833-12763259	Cluster_305	Pocillopora_meandrina_HIv1___Sc0000000	12762833	12763259	427	293	42	0.013651877133105802	-	UGAAACUCUGAUCUGAAAAUAUUUGUC	206	1	290	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12777775-12778197	Cluster_306	Pocillopora_meandrina_HIv1___Sc0000000	12777775	12778197	423	163	52	0.10429447852760736	-	AAUCUCUUUAAGCAUGGACCUGG	48	2	35	5	0	71	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12848533-12848948	Cluster_307	Pocillopora_meandrina_HIv1___Sc0000000	12848533	12848948	416	97	6	0.0	-	UGGACCUCAGAUCAGGC	57	97	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12951425-12951935	Cluster_308	Pocillopora_meandrina_HIv1___Sc0000000	12951425	12951935	511	725	222	0.10344827586206896	-	UCCGUCUGAUAGAUAUCCAUGAAAUGUC	157	35	659	3	2	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13269363-13269787	Cluster_309	Pocillopora_meandrina_HIv1___Sc0000000	13269363	13269787	425	140	31	0.9928571428571429	+	UACCGUAGAACUUUCCAGAACAUU	46	3	75	2	0	2	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13278878-13279296	Cluster_310	Pocillopora_meandrina_HIv1___Sc0000000	13278878	13279296	419	283	172	0.9823321554770318	+	UUAUUCAUUUUACUUCUCCUUC	14	94	75	39	43	20	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13315394-13315809	Cluster_311	Pocillopora_meandrina_HIv1___Sc0000000	13315394	13315809	416	75	2	0.0	-	CGUGGAAGGUAGGUCG	74	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13335663-13336112	Cluster_312	Pocillopora_meandrina_HIv1___Sc0000000	13335663	13336112	450	912	217	0.9978070175438597	+	CUUGUAAUUGGAAUGAGUA	125	639	61	130	31	28	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13337548-13338139	Cluster_313	Pocillopora_meandrina_HIv1___Sc0000000	13337548	13338139	592	544	300	0.9908088235294118	+	GAAGUCUGUACUGAAAGGUGU	21	179	204	59	44	35	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13607264-13607690	Cluster_314	Pocillopora_meandrina_HIv1___Sc0000000	13607264	13607690	427	123	23	0.991869918699187	+	UCGUUUAGAUCAGAGAUCACCUCAACU	55	1	120	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13714447-13714873	Cluster_315	Pocillopora_meandrina_HIv1___Sc0000000	13714447	13714873	427	360	28	0.9972222222222222	+	UCGUUUAGAUCAGAGAUCACCUCAACU	183	0	360	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13752128-13752978	Cluster_316	Pocillopora_meandrina_HIv1___Sc0000000	13752128	13752978	851	1635	512	0.09785932721712538	-	UGAUUUAUAGGAGUAAUGAGACAUUAU	148	24	1499	18	21	22	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13753534-13755105	Cluster_317	Pocillopora_meandrina_HIv1___Sc0000000	13753534	13755105	1572	2217	963	0.06450157870996842	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	86	17	2050	6	11	76	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13777450-13777874	Cluster_318	Pocillopora_meandrina_HIv1___Sc0000000	13777450	13777874	425	251	52	0.9920318725099602	+	CGCGGAAAGAGGGGAAAUUGCACU	32	57	118	9	9	2	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13793624-13794060	Cluster_319	Pocillopora_meandrina_HIv1___Sc0000000	13793624	13794060	437	534	141	0.9775280898876404	+	UGCGAAAGAAACAGGGAAAGUUUGACGAUG	61	4	454	1	9	31	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13795207-13795634	Cluster_320	Pocillopora_meandrina_HIv1___Sc0000000	13795207	13795634	428	106	6	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	67	0	106	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13888862-13889287	Cluster_321	Pocillopora_meandrina_HIv1___Sc0000000	13888862	13889287	426	111	44	0.990990990990991	+	UGUGUAGAUAUGUCUUUUGGACAGGA	35	1	108	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13932415-13932827	Cluster_322	Pocillopora_meandrina_HIv1___Sc0000000	13932415	13932827	413	108	62	1.0	+	UGACGAUUUUCGCGGCUCGAUUUUGU	11	2	106	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14041336-14042284	Cluster_323	Pocillopora_meandrina_HIv1___Sc0000000	14041336	14042284	949	2241	779	0.09058456046407853	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	162	18	2107	10	17	29	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14042286-14043154	Cluster_324	Pocillopora_meandrina_HIv1___Sc0000000	14042286	14043154	869	577	294	0.07625649913344887	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	35	4	554	6	4	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14043355-14045670	Cluster_325	Pocillopora_meandrina_HIv1___Sc0000000	14043355	14045670	2316	4557	1429	0.14702655255650648	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	205	146	3840	41	38	188	304	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14199236-14199664	Cluster_326	Pocillopora_meandrina_HIv1___Sc0000000	14199236	14199664	429	299	25	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	209	3	295	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14564110-14564538	Cluster_327	Pocillopora_meandrina_HIv1___Sc0000000	14564110	14564538	429	297	29	0.003367003367003367	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	203	2	295	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14751024-14751452	Cluster_328	Pocillopora_meandrina_HIv1___Sc0000000	14751024	14751452	429	263	137	0.9505703422053232	+	UCAGAUGGUUGAUAACUGCAGAUGACGU	26	5	247	1	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14751993-14752696	Cluster_329	Pocillopora_meandrina_HIv1___Sc0000000	14751993	14752696	704	283	139	0.9257950530035336	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	24	1	272	1	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14753927-14754355	Cluster_330	Pocillopora_meandrina_HIv1___Sc0000000	14753927	14754355	429	247	139	0.8178137651821862	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	25	1	228	1	0	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14917731-14918157	Cluster_331	Pocillopora_meandrina_HIv1___Sc0000000	14917731	14918157	427	164	75	0.0	-	UUUGAUUGACGUACGGUAUUUGAGACGC	14	2	151	1	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15297104-15297532	Cluster_332	Pocillopora_meandrina_HIv1___Sc0000000	15297104	15297532	429	158	35	0.17088607594936708	-	UCUCUCUCGGUAUAGCUUUCAAAACAGUC	60	4	118	1	3	31	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15361940-15362422	Cluster_333	Pocillopora_meandrina_HIv1___Sc0000000	15361940	15362422	483	376	107	0.0	-	CCUCUAUGAUGAUUACCUUAACAC	35	167	95	17	22	32	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15365853-15366280	Cluster_334	Pocillopora_meandrina_HIv1___Sc0000000	15365853	15366280	428	212	114	0.0	-	AUUUCUCUCUGAAGGGC	11	109	84	9	4	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15682027-15682444	Cluster_335	Pocillopora_meandrina_HIv1___Sc0000000	15682027	15682444	418	205	8	0.9951219512195122	+	AAAUCCCACCUGGAUUUU	159	205	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15838795-15839444	Cluster_336	Pocillopora_meandrina_HIv1___Sc0000000	15838795	15839444	650	1202	239	0.23377703826955074	.	UGAUUGAGUCAAAGACAAUGUGGGAGUC	339	9	1113	5	6	48	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15877485-15877913	Cluster_337	Pocillopora_meandrina_HIv1___Sc0000000	15877485	15877913	429	185	8	0.9945945945945946	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	159	0	185	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16151380-16151857	Cluster_338	Pocillopora_meandrina_HIv1___Sc0000000	16151380	16151857	478	407	228	0.0	-	AAGAACCAUCUGCAUCAGACAU	12	84	140	43	51	55	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16197870-16198683	Cluster_339	Pocillopora_meandrina_HIv1___Sc0000000	16197870	16198683	814	16976	441	0.9995876531573987	+	UAUGAUAUCAUAGCCUUUGAGA	8370	1462	804	1644	10887	1174	1005	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16218376-16218795	Cluster_340	Pocillopora_meandrina_HIv1___Sc0000000	16218376	16218795	420	4919	87	0.00020329335230737954	-	GACUUGAAGCGGUUGGAA	1790	4916	1	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16370090-16370544	Cluster_341	Pocillopora_meandrina_HIv1___Sc0000000	16370090	16370544	455	1894	150	0.989440337909187	+	AGCUCAUUCAGGACAGUCCAGCGAACUAUC	750	60	1746	15	48	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16388395-16388993	Cluster_342	Pocillopora_meandrina_HIv1___Sc0000000	16388395	16388993	599	1836	196	0.9961873638344226	+	AGCUCAUUCAGGACAGUCCAGCGAACUAUC	696	77	1687	12	39	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16449058-16449470	Cluster_343	Pocillopora_meandrina_HIv1___Sc0000000	16449058	16449470	413	128	79	0.0078125	-	AAAGACUGGCAGCAUUGUGGACGUUGUU	9	28	79	11	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16450619-16451049	Cluster_344	Pocillopora_meandrina_HIv1___Sc0000000	16450619	16451049	431	332	243	0.012048192771084338	-	GAAAAGAUCUGCAGAUGAAGAGAAAGAUGA	7	48	237	16	9	13	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16480310-16481760	Cluster_345	Pocillopora_meandrina_HIv1___Sc0000000	16480310	16481760	1451	2545	1032	0.3237721021611002	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	86	44	2102	47	25	125	202	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16481862-16482705	Cluster_346	Pocillopora_meandrina_HIv1___Sc0000000	16481862	16482705	844	6905	825	0.05763939174511224	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	1403	31	6577	22	20	148	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16482875-16483301	Cluster_347	Pocillopora_meandrina_HIv1___Sc0000000	16482875	16483301	427	237	132	0.1350210970464135	-	UGAGUCGAGGUUAUUCACAAUACGAGC	35	8	204	2	3	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16894001-16894416	Cluster_348	Pocillopora_meandrina_HIv1___Sc0000000	16894001	16894416	416	120	15	0.0	-	GAUUUGGAUGGAGCUU	54	120	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16918087-16918513	Cluster_349	Pocillopora_meandrina_HIv1___Sc0000000	16918087	16918513	427	203	61	0.0	-	GCUAUAGACUGCUCUUUGAUCCAAACACAU	36	17	112	8	14	12	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17062895-17064294	Cluster_350	Pocillopora_meandrina_HIv1___Sc0000000	17062895	17064294	1400	1721	618	0.925624636839047	+	UAAGCAUCGUCGAUAAAUACAUUAAAGA	72	46	1539	43	15	37	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17091980-17092444	Cluster_351	Pocillopora_meandrina_HIv1___Sc0000000	17091980	17092444	465	607	166	0.006589785831960461	-	GGUAGCGUGGCCGAGU	94	503	6	31	34	22	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17094792-17095207	Cluster_352	Pocillopora_meandrina_HIv1___Sc0000000	17094792	17095207	416	147	58	0.9863945578231292	+	GGUAGCGUGGCCGAGC	55	126	5	1	11	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17582770-17583200	Cluster_353	Pocillopora_meandrina_HIv1___Sc0000000	17582770	17583200	431	468	52	0.0	-	UGAUCUCUGUUAUACCCUCUUGGGUAGUGU	171	2	463	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17629601-17630015	Cluster_354	Pocillopora_meandrina_HIv1___Sc0000000	17629601	17630015	415	94	13	1.0	+	GAGACUUGAAGCGGUG	57	94	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17858000-17858429	Cluster_355	Pocillopora_meandrina_HIv1___Sc0000000	17858000	17858429	430	189	71	0.9841269841269841	+	UAUCCGGUUGUAACGCUAGACAGUCACGCU	35	5	181	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17927790-17928217	Cluster_356	Pocillopora_meandrina_HIv1___Sc0000000	17927790	17928217	428	117	7	0.0	-	GUGAAUGAUGACAAGAAACAAACUGAUC	96	0	114	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18139302-18139734	Cluster_357	Pocillopora_meandrina_HIv1___Sc0000000	18139302	18139734	433	262	90	0.9809160305343512	+	UGUAAGACUGACGAAGGCUAAGGUGAACAGC	26	7	233	1	0	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18537549-18537973	Cluster_358	Pocillopora_meandrina_HIv1___Sc0000000	18537549	18537973	425	84	19	0.9880952380952381	+	UUUCAGCAGAGGACAAUGAUUCAAAAGAUG	45	2	82	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18555063-18555627	Cluster_359	Pocillopora_meandrina_HIv1___Sc0000000	18555063	18555627	565	710	181	0.7577464788732394	.	UCGAAACGCAUCCAUUUUGGCCAUACA	94	32	588	9	8	40	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18556448-18556864	Cluster_360	Pocillopora_meandrina_HIv1___Sc0000000	18556448	18556864	417	316	57	0.9208860759493671	+	CUUGAAGCGGUUGGAUA	178	260	51	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18562802-18563452	Cluster_361	Pocillopora_meandrina_HIv1___Sc0000000	18562802	18563452	651	590	277	0.2033898305084746	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	84	9	536	6	3	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18563602-18564155	Cluster_362	Pocillopora_meandrina_HIv1___Sc0000000	18563602	18564155	554	893	303	0.13325867861142218	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	94	5	809	5	11	30	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18564393-18564819	Cluster_363	Pocillopora_meandrina_HIv1___Sc0000000	18564393	18564819	427	270	156	0.15185185185185185	-	UGAGUCGAGGUUAUUCACAAUACGAGC	43	6	236	3	2	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18585347-18586585	Cluster_364	Pocillopora_meandrina_HIv1___Sc0000000	18585347	18586585	1239	1291	516	0.2687838884585593	.	UUGGAUAAUUUUGACGAAACCAGAGACA	149	19	1170	8	18	29	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18586632-18588003	Cluster_365	Pocillopora_meandrina_HIv1___Sc0000000	18586632	18588003	1372	1337	444	0.5886312640239342	.	AGCAUACUCGAAGAACUGCAAGUUAAUGG	104	39	1241	4	17	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18589062-18589489	Cluster_366	Pocillopora_meandrina_HIv1___Sc0000000	18589062	18589489	428	361	74	0.038781163434903045	-	UGUGUUCGUUGAAUGGCUCCCCAUGCG	98	3	347	0	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18762339-18762752	Cluster_367	Pocillopora_meandrina_HIv1___Sc0000000	18762339	18762752	414	95	28	0.15789473684210525	-	GACGAACGGCGAACUA	55	85	3	3	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18807942-18808357	Cluster_368	Pocillopora_meandrina_HIv1___Sc0000000	18807942	18808357	416	140	19	0.9714285714285714	+	CCUGGAGUUAAGGCU	34	136	2	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18814008-18814422	Cluster_369	Pocillopora_meandrina_HIv1___Sc0000000	18814008	18814422	415	113	16	0.0	-	CCCGUGUUGUAGGCA	68	110	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18820441-18820856	Cluster_370	Pocillopora_meandrina_HIv1___Sc0000000	18820441	18820856	416	155	52	0.0	-	AUCUCGUGUGGAACA	16	134	12	4	4	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18903586-18904001	Cluster_371	Pocillopora_meandrina_HIv1___Sc0000000	18903586	18904001	416	113	33	0.9292035398230089	+	GCCUUAUGACCUCAUA	43	106	2	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18972296-18972712	Cluster_372	Pocillopora_meandrina_HIv1___Sc0000000	18972296	18972712	417	114	16	0.9824561403508771	+	CUUUCCGAGGUCGCGCU	45	113	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19104877-19105303	Cluster_373	Pocillopora_meandrina_HIv1___Sc0000000	19104877	19105303	427	217	121	0.8525345622119815	+	UGAGUCGAGGUUAUUCACAAUACGAGC	30	6	195	2	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19105541-19106198	Cluster_374	Pocillopora_meandrina_HIv1___Sc0000000	19105541	19106198	658	1101	311	0.9300635785649409	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	107	10	1047	3	2	20	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19106418-19107073	Cluster_375	Pocillopora_meandrina_HIv1___Sc0000000	19106418	19107073	656	611	300	0.6170212765957447	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	29	10	536	3	5	22	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19107224-19107869	Cluster_376	Pocillopora_meandrina_HIv1___Sc0000000	19107224	19107869	646	612	293	0.8186274509803921	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	112	12	550	10	2	9	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19172834-19173259	Cluster_377	Pocillopora_meandrina_HIv1___Sc0000000	19172834	19173259	426	157	112	0.08917197452229299	-	CUUGAGUCAAACAAGCGUGCACUGAAUA	12	23	118	7	4	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19548879-19549664	Cluster_378	Pocillopora_meandrina_HIv1___Sc0000000	19548879	19549664	786	3492	410	0.22880870561282932	.	UUCGAAGAAACUCUUGCCAUCGCCUGGA	833	32	3246	4	18	42	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19550612-19551039	Cluster_379	Pocillopora_meandrina_HIv1___Sc0000000	19550612	19551039	428	92	9	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	54	0	91	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19551968-19552391	Cluster_380	Pocillopora_meandrina_HIv1___Sc0000000	19551968	19552391	424	204	112	0.23529411764705882	.	UGUUGCAAAGCUCUUCGUCCAAAAGA	12	12	174	4	1	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19670489-19670916	Cluster_381	Pocillopora_meandrina_HIv1___Sc0000000	19670489	19670916	428	138	61	0.2318840579710145	.	UGUUUGAUCCAAUUCAGGAUACUUUGGC	25	5	114	1	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19723215-19723629	Cluster_382	Pocillopora_meandrina_HIv1___Sc0000000	19723215	19723629	415	80	18	0.95	+	GACGACGUCAGAGAGC	53	77	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19726199-19726622	Cluster_383	Pocillopora_meandrina_HIv1___Sc0000000	19726199	19726622	424	190	95	0.7315789473684211	.	AAAGCACAAGCCGGGACUA	14	128	3	43	12	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19749017-19749441	Cluster_384	Pocillopora_meandrina_HIv1___Sc0000000	19749017	19749441	425	156	79	0.8782051282051282	+	UAAGUACUACAUCGUUCGAUAGGCUCUCAGC	25	5	138	1	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19758301-19758728	Cluster_385	Pocillopora_meandrina_HIv1___Sc0000000	19758301	19758728	428	184	81	1.0	+	UACGGUAUUUGAGACGCAAUAUGACUCGC	26	5	170	2	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19791285-19791992	Cluster_386	Pocillopora_meandrina_HIv1___Sc0000000	19791285	19791992	708	814	119	0.6265356265356266	.	UCCGGCUCGAAGGACCAU	143	505	275	21	3	10	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19799557-19800087	Cluster_387	Pocillopora_meandrina_HIv1___Sc0000000	19799557	19800087	531	3361	879	0.0005950609937518596	-	AGGAAGAAUGAGACACUCUGAUUGCU	69	851	1794	193	247	140	136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19800614-19801084	Cluster_388	Pocillopora_meandrina_HIv1___Sc0000000	19800614	19801084	471	2562	389	0.00078064012490242	-	GUCAAUGAUGAUUGUGUGAUUCCCCUUCA	476	174	1831	81	56	82	338	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19802252-19802723	Cluster_389	Pocillopora_meandrina_HIv1___Sc0000000	19802252	19802723	472	1472	224	0.014266304347826086	-	UGGAAAUGAUGUUACUCCGUGU	345	288	465	130	373	135	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19809696-19810174	Cluster_390	Pocillopora_meandrina_HIv1___Sc0000000	19809696	19810174	479	946	248	0.0021141649048625794	-	CUACCAUCUGAGGGCU	67	542	199	72	45	26	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19813053-19813481	Cluster_391	Pocillopora_meandrina_HIv1___Sc0000000	19813053	19813481	429	418	286	0.009569377990430622	-	GAUCCGUGGAGCUAAGGACAAGAAGCU	8	160	155	21	26	23	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19813596-19814045	Cluster_392	Pocillopora_meandrina_HIv1___Sc0000000	19813596	19814045	450	269	169	0.007434944237918215	-	CAGAUCCACAGGAUCCGUAUCACUCU	10	126	79	14	18	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19856455-19856872	Cluster_393	Pocillopora_meandrina_HIv1___Sc0000000	19856455	19856872	418	156	43	0.9743589743589743	+	ACCGAGGAGGAAAGACUG	55	138	10	1	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19934098-19934580	Cluster_394	Pocillopora_meandrina_HIv1___Sc0000000	19934098	19934580	483	5164	204	0.993996901626646	+	GUAGUCGUGGCCGAGUGG	1588	5078	16	33	16	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19970946-19971367	Cluster_395	Pocillopora_meandrina_HIv1___Sc0000000	19970946	19971367	422	190	91	0.02631578947368421	-	AAUUAUGAUGAGAACUAUACUUCAAGGU	18	32	99	23	14	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19971632-19972106	Cluster_396	Pocillopora_meandrina_HIv1___Sc0000000	19971632	19972106	475	16261	1031	0.0	-	CUGUGAUAAAACUUGAAGUUCUGAGC	2024	4618	7366	1039	1055	622	1561	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19974441-19974957	Cluster_397	Pocillopora_meandrina_HIv1___Sc0000000	19974441	19974957	517	723	352	0.0013831258644536654	-	UUCAGUGGUUCCUGUCGAGAGGUACAUA	20	259	308	57	21	33	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19977738-19978273	Cluster_398	Pocillopora_meandrina_HIv1___Sc0000000	19977738	19978273	536	1027	332	0.006815968841285297	-	AUGGCCAUUUGCUUGUUCCCUGA	90	250	363	73	93	199	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20051814-20052242	Cluster_399	Pocillopora_meandrina_HIv1___Sc0000000	20051814	20052242	429	276	41	0.0	-	GAGUAAAUCACGAGAGAAAGACAAGGACA	117	4	266	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20072489-20072904	Cluster_400	Pocillopora_meandrina_HIv1___Sc0000000	20072489	20072904	416	3591	11	0.000278473962684489	-	UUCCGAGGUCGCGGCC	2903	3591	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20238800-20239217	Cluster_401	Pocillopora_meandrina_HIv1___Sc0000000	20238800	20239217	418	869	96	0.0034522439585730723	-	UCCGGCUCGAAGGACCA	336	760	103	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20372416-20372510	Cluster_402	Pocillopora_meandrina_HIv1___Sc0000000	20372416	20372510	95	513421	441	0.0	-	UCAAGUCUAGGCUGGUUAGUUU	353179	2932	19	20448	487366	2527	129	22	Y	spi-mir-temp-15_Stylophora_pistillata_Liew_et_al._2014_NA;spi-miR-L-temp-15_Stylophora_pistillata_Praher_et_al._2021_NA
Pocillopora_meandrina_HIv1___Sc0000000:20455492-20455961	Cluster_403	Pocillopora_meandrina_HIv1___Sc0000000	20455492	20455961	470	820	245	0.003658536585365854	-	GGUAGCGUGGCCGAGU	134	679	44	24	34	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20487173-20487823	Cluster_404	Pocillopora_meandrina_HIv1___Sc0000000	20487173	20487823	651	2404	959	0.9463394342762064	+	CAAUUCAGACUACUCUUUGUCCAACCCAA	84	802	658	309	316	115	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20534016-20535105	Cluster_405	Pocillopora_meandrina_HIv1___Sc0000000	20534016	20535105	1090	3951	1785	0.434067324727917	.	UUCUGGCGUAUAACUGUUCACC	87	2118	75	1092	528	110	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20554497-20554926	Cluster_406	Pocillopora_meandrina_HIv1___Sc0000000	20554497	20554926	430	405	103	0.012345679012345678	-	GCCCGACUAGCUCAGUCGGUAGAGCAUGA	154	53	339	4	4	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20557163-20557593	Cluster_407	Pocillopora_meandrina_HIv1___Sc0000000	20557163	20557593	431	5501	341	1.0	+	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	2309	387	5091	9	4	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20559748-20560166	Cluster_408	Pocillopora_meandrina_HIv1___Sc0000000	20559748	20560166	419	1134	59	1.0	+	CAGUCGGUAGAGCAUA	462	1134	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20665499-20665929	Cluster_409	Pocillopora_meandrina_HIv1___Sc0000000	20665499	20665929	431	1001	147	0.000999000999000999	-	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	475	84	909	3	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20681229-20681645	Cluster_410	Pocillopora_meandrina_HIv1___Sc0000000	20681229	20681645	417	1089	116	0.9990817263544536	+	GCUGCCGGUCGUUGG	629	1033	39	9	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20703269-20703749	Cluster_411	Pocillopora_meandrina_HIv1___Sc0000000	20703269	20703749	481	3705	630	0.0024291497975708503	-	GCGCGGAUGAGCCUCACUGGUGUGGGGU	269	1848	1383	169	124	111	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20729679-20730094	Cluster_412	Pocillopora_meandrina_HIv1___Sc0000000	20729679	20730094	416	126	16	0.0	-	GCUGGAUGAUGAGACU	63	123	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21034486-21034968	Cluster_413	Pocillopora_meandrina_HIv1___Sc0000000	21034486	21034968	483	1390	176	0.9784172661870504	+	UCAUCUUCGGAGCUGACUGUAACAAGCC	266	7	1331	7	11	14	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21389688-21390088	Cluster_414	Pocillopora_meandrina_HIv1___Sc0000000	21389688	21390088	401	152	116	0.09868421052631579	-	GCCGAGGUCGAGAGUU	6	83	31	16	9	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21409875-21410303	Cluster_415	Pocillopora_meandrina_HIv1___Sc0000000	21409875	21410303	429	453	42	0.002207505518763797	-	UGUGCAGGAACUUAAAAAUACAAUCUAUA	288	5	446	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21472540-21472955	Cluster_416	Pocillopora_meandrina_HIv1___Sc0000000	21472540	21472955	416	298	5	0.006711409395973154	-	CGUGUGCUCUUAACUA	255	296	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21554824-21555299	Cluster_417	Pocillopora_meandrina_HIv1___Sc0000000	21554824	21555299	476	395	250	0.7367088607594937	.	UCCGAUAUUGGUGCUGACGU	24	238	35	84	29	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:69798-71462	Cluster_418	Pocillopora_meandrina_HIv1___Sc0000001	69798	71462	1665	14983	1221	0.19195087766134952	-	UUGUCUGGAUUGUACACUUUGAAGUGCA	1352	83	14467	32	46	92	263	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:244653-245089	Cluster_419	Pocillopora_meandrina_HIv1___Sc0000001	244653	245089	437	604	150	0.0016556291390728477	-	CAGCACAUUUACUGAAGCCGUCUGA	60	35	490	12	12	17	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:412107-413609	Cluster_420	Pocillopora_meandrina_HIv1___Sc0000001	412107	413609	1503	1785	798	0.04873949579831933	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	52	15	1685	9	15	19	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:417093-417508	Cluster_421	Pocillopora_meandrina_HIv1___Sc0000001	417093	417508	416	255	46	0.19215686274509805	-	GGGACUGUAGUUCAAC	181	229	15	4	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:425523-426000	Cluster_422	Pocillopora_meandrina_HIv1___Sc0000001	425523	426000	478	476	178	0.8361344537815126	+	UCACAAUCUUCCUUACUGCUUCUGGGUA	49	8	451	0	2	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:456750-457153	Cluster_423	Pocillopora_meandrina_HIv1___Sc0000001	456750	457153	404	102	68	1.0	+	GGUGAAAACGAUGACUGUGCU	7	34	23	24	8	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:556066-556480	Cluster_424	Pocillopora_meandrina_HIv1___Sc0000001	556066	556480	415	269	195	0.007434944237918215	-	GAAGAUGGACAAUGGCU	9	114	80	16	22	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:818096-818531	Cluster_425	Pocillopora_meandrina_HIv1___Sc0000001	818096	818531	436	397	183	0.9974811083123426	+	UGUAACUGAAAAGAUCUUGAAGGAACUGAA	16	16	370	4	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:868706-869124	Cluster_426	Pocillopora_meandrina_HIv1___Sc0000001	868706	869124	419	320	227	0.009375	-	CCGAACUGAGAUCAUUAUUUUGGCCA	6	91	133	21	27	9	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:891761-892187	Cluster_427	Pocillopora_meandrina_HIv1___Sc0000001	891761	892187	427	184	68	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	20	8	173	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:911186-911649	Cluster_428	Pocillopora_meandrina_HIv1___Sc0000001	911186	911649	464	470	99	0.8829787234042553	+	CGAACCAACAAGAACAAUAUGUGCUGACUAC	130	4	457	2	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:912150-912578	Cluster_429	Pocillopora_meandrina_HIv1___Sc0000001	912150	912578	429	261	75	0.9885057471264368	+	UUGCAAAUGAAUCAGCAGAAUGUAGAGAGA	50	3	248	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:914054-914481	Cluster_430	Pocillopora_meandrina_HIv1___Sc0000001	914054	914481	428	141	52	0.014184397163120567	-	AAUGGAAAGAAAACACUGAAAAAUGAGG	30	11	104	0	0	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:917428-917858	Cluster_431	Pocillopora_meandrina_HIv1___Sc0000001	917428	917858	431	311	95	0.4919614147909968	.	UCGAUCACCAGCGCACUCCAAACCAAUAAGG	36	6	247	8	0	29	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:968471-969480	Cluster_432	Pocillopora_meandrina_HIv1___Sc0000001	968471	969480	1010	1912	516	0.223326359832636	.	UGUACUCUUUCUAUUUUCCUUCGUUCCUGGG	140	61	1783	11	6	10	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:974684-975142	Cluster_433	Pocillopora_meandrina_HIv1___Sc0000001	974684	975142	459	2069	183	0.9173513774770421	+	UUUCACCAAUCCGAAGUGUCCCAAAAGU	478	34	1916	2	13	28	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1077987-1078403	Cluster_434	Pocillopora_meandrina_HIv1___Sc0000001	1077987	1078403	417	138	18	0.028985507246376812	-	UGUGUUUUUCGGUCUGU	70	131	2	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1354658-1355144	Cluster_435	Pocillopora_meandrina_HIv1___Sc0000001	1354658	1355144	487	4264	466	0.003048780487804878	-	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	1159	385	3759	16	28	39	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1459402-1459496	Cluster_436	Pocillopora_meandrina_HIv1___Sc0000001	1459402	1459496	95	3403	132	1.0	+	AAAGAAGUGCAAGUGGUAGAGA	1677	732	3	343	2259	57	9	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000001:1537727-1538141	Cluster_437	Pocillopora_meandrina_HIv1___Sc0000001	1537727	1538141	415	123	7	0.0	-	UCCGCUGUAGUAUAG	73	123	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1587809-1588305	Cluster_438	Pocillopora_meandrina_HIv1___Sc0000001	1587809	1588305	497	308	145	0.9383116883116883	+	UCUGAUCGACGAGUUUCAAUCCUUUGU	28	1	301	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1588893-1589316	Cluster_439	Pocillopora_meandrina_HIv1___Sc0000001	1588893	1589316	424	176	89	0.8920454545454546	+	UAUGUGAUCGGUGAAUUUGCUUCAACA	18	1	162	0	2	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1589392-1589818	Cluster_440	Pocillopora_meandrina_HIv1___Sc0000001	1589392	1589818	427	135	76	0.837037037037037	+	UGUAUUGAUUGAACUUGUCGGUUGACC	13	2	116	0	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1590307-1590710	Cluster_441	Pocillopora_meandrina_HIv1___Sc0000001	1590307	1590710	404	155	82	0.8838709677419355	+	UACUGGAAUAAUAACUUUACGAUCAACA	18	0	148	0	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1591154-1591562	Cluster_442	Pocillopora_meandrina_HIv1___Sc0000001	1591154	1591562	409	139	83	0.8489208633093526	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	12	0	127	1	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1606008-1606599	Cluster_443	Pocillopora_meandrina_HIv1___Sc0000001	1606008	1606599	592	433	100	0.9745958429561201	+	UACUCCAUUUUUCUGCAGCCUUUUUAUC	62	2	423	6	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1639234-1639676	Cluster_444	Pocillopora_meandrina_HIv1___Sc0000001	1639234	1639676	443	213	165	1.0	+	CUACGUAGAUUUCACAUGUGUGC	5	40	112	12	10	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1689505-1689966	Cluster_445	Pocillopora_meandrina_HIv1___Sc0000001	1689505	1689966	462	360	243	0.9972222222222222	+	CCUCUGCCACGAGAAGAACGAACU	7	108	143	29	15	21	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1690274-1690785	Cluster_446	Pocillopora_meandrina_HIv1___Sc0000001	1690274	1690785	512	467	274	0.9978586723768736	+	CCGAGAAACAAACCGAGACU	10	152	196	20	34	43	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1691390-1691808	Cluster_447	Pocillopora_meandrina_HIv1___Sc0000001	1691390	1691808	419	245	162	0.9959183673469387	+	CUUGGUCAUGCGCCGAAUGCCUGAACG	14	85	104	14	9	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1692256-1692988	Cluster_448	Pocillopora_meandrina_HIv1___Sc0000001	1692256	1692988	733	936	585	0.9989316239316239	+	UACAGACAUCUAUGGUAACUCAAAAA	18	239	415	61	60	93	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1709074-1709490	Cluster_449	Pocillopora_meandrina_HIv1___Sc0000001	1709074	1709490	417	204	23	0.9950980392156863	+	GUUGGAUCCGGCCCACU	129	199	4	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1723121-1723549	Cluster_450	Pocillopora_meandrina_HIv1___Sc0000001	1723121	1723549	429	380	40	0.0	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	275	1	378	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1752847-1753261	Cluster_451	Pocillopora_meandrina_HIv1___Sc0000001	1752847	1753261	415	80	17	1.0	+	CCGGCCUGGACUGGC	36	80	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1910655-1911071	Cluster_452	Pocillopora_meandrina_HIv1___Sc0000001	1910655	1911071	417	131	18	0.0	-	CGAGACUUGAAGCGGUU	57	131	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1981097-1981525	Cluster_453	Pocillopora_meandrina_HIv1___Sc0000001	1981097	1981525	429	123	55	0.991869918699187	+	UAUGAUUACGAGGAAUUCUCCAAAGACUUUG	29	9	105	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2046484-2047577	Cluster_454	Pocillopora_meandrina_HIv1___Sc0000001	2046484	2047577	1094	1245	464	0.9855421686746988	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	96	7	1214	5	2	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2047888-2048301	Cluster_455	Pocillopora_meandrina_HIv1___Sc0000001	2047888	2048301	414	210	118	0.9428571428571428	+	UACUCGAUUUCCUCUUGCAUGUAAGGC	22	5	191	9	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2049671-2051838	Cluster_456	Pocillopora_meandrina_HIv1___Sc0000001	2049671	2051838	2168	2896	1064	0.9236878453038674	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	93	41	2689	29	21	32	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2051970-2052452	Cluster_457	Pocillopora_meandrina_HIv1___Sc0000001	2051970	2052452	483	458	273	0.8275109170305677	+	UGUUCCGGUACAAAUUUUCCCUGCAUA	14	4	395	3	6	16	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2187675-2188091	Cluster_458	Pocillopora_meandrina_HIv1___Sc0000001	2187675	2188091	417	92	19	0.0	-	AUGUACAAUUCUAGACA	73	80	9	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2233397-2233817	Cluster_459	Pocillopora_meandrina_HIv1___Sc0000001	2233397	2233817	421	106	40	0.9905660377358491	+	GAACCGAAAACUUUCAACAAAAUUCCCUUU	22	12	73	6	11	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2235738-2236162	Cluster_460	Pocillopora_meandrina_HIv1___Sc0000001	2235738	2236162	425	152	87	1.0	+	ACGAAAAUAGCAGAAUGAACGAAGAAGC	17	2	144	3	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2237617-2238340	Cluster_461	Pocillopora_meandrina_HIv1___Sc0000001	2237617	2238340	724	3218	501	0.13362336855189558	-	UGAAACUACUUGAACUGGUUCGCUUCAAU	1023	287	2588	120	54	37	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2243710-2244293	Cluster_462	Pocillopora_meandrina_HIv1___Sc0000001	2243710	2244293	584	2612	363	0.06163859111791731	-	UUAAAUGAAGUUUCCAAUGUUUGACUGUC	1051	33	2467	19	15	47	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2254607-2255032	Cluster_463	Pocillopora_meandrina_HIv1___Sc0000001	2254607	2255032	426	148	91	0.9797297297297297	+	UGCAAGAGUUUUUCGCCGCGAGACACCUG	26	15	124	2	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2275231-2275660	Cluster_464	Pocillopora_meandrina_HIv1___Sc0000001	2275231	2275660	430	451	108	1.0	+	ACGAAAAUAACAGAAUGAACUUAGAAGCAC	144	5	434	1	4	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2276928-2277360	Cluster_465	Pocillopora_meandrina_HIv1___Sc0000001	2276928	2277360	433	389	132	0.922879177377892	+	AAGUAAAAAACACAAAGCUUCCUGCAGAGA	65	20	355	2	7	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2285037-2285666	Cluster_466	Pocillopora_meandrina_HIv1___Sc0000001	2285037	2285666	630	936	320	0.38995726495726496	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	68	6	899	7	2	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2286291-2287142	Cluster_467	Pocillopora_meandrina_HIv1___Sc0000001	2286291	2287142	852	1244	259	0.8954983922829582	+	CGUGUACGACGCCUCUGCCCGAGCUUCAG	375	10	1198	12	6	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2288505-2288931	Cluster_468	Pocillopora_meandrina_HIv1___Sc0000001	2288505	2288931	427	215	97	0.2372093023255814	.	UCACGAAUCUUUGCCAUUGUGAGGCUC	22	6	200	0	1	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2289525-2289963	Cluster_469	Pocillopora_meandrina_HIv1___Sc0000001	2289525	2289963	439	324	168	0.2345679012345679	.	UCUAACGGAUACAGCUGCUGUACUGCU	26	23	278	5	3	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2290080-2290503	Cluster_470	Pocillopora_meandrina_HIv1___Sc0000001	2290080	2290503	424	112	33	0.9375	+	UAGUGUUGCUAUACUGGGAUUUCC	42	3	57	1	1	0	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2303039-2303468	Cluster_471	Pocillopora_meandrina_HIv1___Sc0000001	2303039	2303468	430	541	119	0.9981515711645101	+	GAACCAAAAACUUUCAACAAAAUUCCCUUU	205	12	504	3	21	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2305359-2305783	Cluster_472	Pocillopora_meandrina_HIv1___Sc0000001	2305359	2305783	425	110	59	1.0	+	GGCCGACUGAAGACGAACGAGAAUUAGC	15	1	107	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2324994-2325423	Cluster_473	Pocillopora_meandrina_HIv1___Sc0000001	2324994	2325423	430	217	56	0.9815668202764977	+	UUAUUUGGAACCGAAAACUUUC	41	37	129	1	43	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2327372-2327799	Cluster_474	Pocillopora_meandrina_HIv1___Sc0000001	2327372	2327799	428	122	54	0.9918032786885246	+	ACGAAAAUAGCAGAAUGAACGAAGAAGC	18	1	118	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2328890-2329313	Cluster_475	Pocillopora_meandrina_HIv1___Sc0000001	2328890	2329313	424	177	78	0.2655367231638418	.	AAGCGUGAAACUACUUGAACCGGUU	20	22	103	15	12	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2348008-2348432	Cluster_476	Pocillopora_meandrina_HIv1___Sc0000001	2348008	2348432	425	90	34	1.0	+	ACGAAAAUAGCAGAAUGAACGAAGAAGCAC	19	2	85	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2368290-2368717	Cluster_477	Pocillopora_meandrina_HIv1___Sc0000001	2368290	2368717	428	99	28	0.9696969696969697	+	GAGCCGAAAACUUUCAACAAAAUUCCCUAU	19	1	81	10	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2487360-2487774	Cluster_478	Pocillopora_meandrina_HIv1___Sc0000001	2487360	2487774	415	252	147	0.996031746031746	+	ACGAGAUGUAAACUUUCCAGAA	33	54	87	31	53	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2537226-2537638	Cluster_479	Pocillopora_meandrina_HIv1___Sc0000001	2537226	2537638	413	296	222	0.010135135135135136	-	UCAAGAGUUUCUGGAACGUGCU	6	97	88	32	30	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2731349-2731771	Cluster_480	Pocillopora_meandrina_HIv1___Sc0000001	2731349	2731771	423	222	80	0.990990990990991	+	GAUGUUGUGUCGGGACCUGAAAC	67	49	68	3	12	84	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2746252-2746672	Cluster_481	Pocillopora_meandrina_HIv1___Sc0000001	2746252	2746672	421	326	18	0.9969325153374233	+	UCGACUCCCGGUAUGGGAACA	276	0	3	290	17	16	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2774475-2774897	Cluster_482	Pocillopora_meandrina_HIv1___Sc0000001	2774475	2774897	423	392	68	1.0	+	CUGGCUGUGAAAGAUCUCGCAUU	116	45	5	16	132	183	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2801084-2801513	Cluster_483	Pocillopora_meandrina_HIv1___Sc0000001	2801084	2801513	430	171	23	0.0	-	CUAUGUGGCAGUGGGUUUUUGGAUCCUCAU	39	1	169	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2839815-2840244	Cluster_484	Pocillopora_meandrina_HIv1___Sc0000001	2839815	2840244	430	280	110	0.0035714285714285713	-	CUGGCCGACUGAAGACGAACGAGAAUUAGC	48	5	266	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2842056-2842485	Cluster_485	Pocillopora_meandrina_HIv1___Sc0000001	2842056	2842485	430	155	21	0.0	-	CUAUGUGGCCGUGGGUUUUUGGAUCCUCAU	30	3	152	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2858571-2858998	Cluster_486	Pocillopora_meandrina_HIv1___Sc0000001	2858571	2858998	428	241	122	0.029045643153526972	-	UUUAAGUAAAAACACAAAGCUUCCUGCAGA	24	26	205	6	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2862246-2862675	Cluster_487	Pocillopora_meandrina_HIv1___Sc0000001	2862246	2862675	430	800	119	0.00625	-	UUAUGUGGCAGUGUGUUUUUGGAUCCUGA	366	19	771	3	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2868049-2868506	Cluster_488	Pocillopora_meandrina_HIv1___Sc0000001	2868049	2868506	458	630	155	0.13968253968253969	-	UUCGAUCCUAAAUUCUCUCCAUG	120	40	299	21	53	191	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2881477-2881912	Cluster_489	Pocillopora_meandrina_HIv1___Sc0000001	2881477	2881912	436	277	70	0.0036101083032490976	-	GGCAGUGGGUUUUUGGAUCCUGAUCAGUGU	80	13	255	0	5	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2903040-2903512	Cluster_490	Pocillopora_meandrina_HIv1___Sc0000001	2903040	2903512	473	291	155	0.020618556701030927	-	UGCUGGCCGACUGAGGACGAACAAGAAUU	19	14	261	3	5	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2983017-2983445	Cluster_491	Pocillopora_meandrina_HIv1___Sc0000001	2983017	2983445	429	129	33	1.0	+	UUGGAACAAAGAUUGAACAUGAUGCUUUUC	53	5	121	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3114844-3115375	Cluster_492	Pocillopora_meandrina_HIv1___Sc0000001	3114844	3115375	532	1918	335	1.0	+	UUGGAAGCUGGCUGUUUUGACU	314	296	652	120	586	145	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3115989-3116533	Cluster_493	Pocillopora_meandrina_HIv1___Sc0000001	3115989	3116533	545	533	190	0.9924953095684803	+	CAGGAAGUGAGAUGC	45	138	304	7	18	35	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3371410-3371825	Cluster_494	Pocillopora_meandrina_HIv1___Sc0000001	3371410	3371825	416	584	35	0.0	-	AGUGUGCUCUUAGCU	282	584	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3380068-3380495	Cluster_495	Pocillopora_meandrina_HIv1___Sc0000001	3380068	3380495	428	131	38	0.0916030534351145	-	UUGGUGUGAUUGUCAUGUCUGGGAAUUUU	32	3	125	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3428050-3428452	Cluster_496	Pocillopora_meandrina_HIv1___Sc0000001	3428050	3428452	403	152	74	0.993421052631579	+	GACGAGGUGGCCGAG	17	105	26	6	3	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3536699-3537117	Cluster_497	Pocillopora_meandrina_HIv1___Sc0000001	3536699	3537117	419	91	21	0.03296703296703297	-	CAACCAGGGAUUGAGAACAGAGGA	22	36	11	4	12	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3656409-3656832	Cluster_498	Pocillopora_meandrina_HIv1___Sc0000001	3656409	3656832	424	104	51	0.009615384615384616	-	UACUGGACUGCAUCUGAAUAUUCCU	14	9	66	1	7	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3680479-3680894	Cluster_499	Pocillopora_meandrina_HIv1___Sc0000001	3680479	3680894	416	165	45	0.9878787878787879	+	CGCCUUCCGGACCUCA	66	137	12	6	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3883546-3883975	Cluster_500	Pocillopora_meandrina_HIv1___Sc0000001	3883546	3883975	430	278	166	0.9964028776978417	+	UCUGAUGGUCUUAAGGGACGUGUGUUU	14	63	159	10	13	21	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3998764-3999467	Cluster_501	Pocillopora_meandrina_HIv1___Sc0000001	3998764	3999467	704	1124489	6789	1.3339392381784081e-05	-	CGACCAAGAUAGUCGAACUCGACCCUGUCA	306905	117133	892120	8818	59514	31354	15550	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4021711-4022206	Cluster_502	Pocillopora_meandrina_HIv1___Sc0000001	4021711	4022206	496	2560	351	0.98828125	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	331	18	2462	17	10	12	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4023280-4023700	Cluster_503	Pocillopora_meandrina_HIv1___Sc0000001	4023280	4023700	421	97	31	0.0	-	GGGGAAUUAGCUCAAAUGGUAGAGCGCU	24	21	55	9	1	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4053472-4054172	Cluster_504	Pocillopora_meandrina_HIv1___Sc0000001	4053472	4054172	701	90703	5211	0.9996472002028599	+	UGGGGGUAGUCGUUCUAUGUAGAUC	8524	45433	29980	3462	2155	2960	6713	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4062957-4063383	Cluster_505	Pocillopora_meandrina_HIv1___Sc0000001	4062957	4063383	427	242	142	0.8512396694214877	+	UGAGUCGAGGUUAUUCACAAUACGAGC	34	8	211	2	3	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4063621-4064323	Cluster_506	Pocillopora_meandrina_HIv1___Sc0000001	4063621	4064323	703	5807	708	0.9636645427931806	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	1406	22	5560	16	19	80	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4064498-4065026	Cluster_507	Pocillopora_meandrina_HIv1___Sc0000001	4064498	4065026	529	662	256	0.6918429003021148	.	UGUGACUGCUUGCAAUAAUAUUAUACA	104	15	609	7	6	3	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4118827-4119300	Cluster_508	Pocillopora_meandrina_HIv1___Sc0000001	4118827	4119300	474	873	299	0.01718213058419244	-	GAAGGCUGCGUGUUCAGGUCACGUCGGGGU	133	418	329	46	31	32	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4229586-4230014	Cluster_509	Pocillopora_meandrina_HIv1___Sc0000001	4229586	4230014	429	450	91	0.9955555555555555	+	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	140	22	414	4	6	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4298315-4298771	Cluster_510	Pocillopora_meandrina_HIv1___Sc0000001	4298315	4298771	457	10406	778	0.0018258696905631366	-	ACGAUCUUCUGAGAUUAAGCCUUUGUU	2183	1564	6333	759	875	447	428	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4312313-4312718	Cluster_511	Pocillopora_meandrina_HIv1___Sc0000001	4312313	4312718	406	128	102	0.015625	-	CGGGGAAGUGCUGUUGUAGUU	4	60	32	8	9	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4313477-4313891	Cluster_512	Pocillopora_meandrina_HIv1___Sc0000001	4313477	4313891	415	190	140	0.0	-	GUGAGGGCAAACUGCAAGAAGACC	6	78	48	13	14	23	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4315110-4315575	Cluster_513	Pocillopora_meandrina_HIv1___Sc0000001	4315110	4315575	466	325	206	0.0	-	GCAGGGCUUUCAGCAAGAACGGAAGA	13	123	85	45	29	23	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4316894-4317370	Cluster_514	Pocillopora_meandrina_HIv1___Sc0000001	4316894	4317370	477	296	150	0.0033783783783783786	-	CCUCGUACGUAGGAAGAACAGGCA	20	62	108	24	11	49	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4317599-4318009	Cluster_515	Pocillopora_meandrina_HIv1___Sc0000001	4317599	4318009	411	191	143	0.010471204188481676	-	GAAUGGAGGAAUGGACA	5	72	65	13	15	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4318455-4318865	Cluster_516	Pocillopora_meandrina_HIv1___Sc0000001	4318455	4318865	411	189	140	0.005291005291005291	-	GCCGAAAUGGGACUGGAUGU	7	100	45	21	7	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4345272-4345690	Cluster_517	Pocillopora_meandrina_HIv1___Sc0000001	4345272	4345690	419	87	49	0.05747126436781609	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	7	1	78	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4361258-4362427	Cluster_518	Pocillopora_meandrina_HIv1___Sc0000001	4361258	4362427	1170	3985	840	0.978168130489335	+	UGUGAUAUUCCGAACACUUGAAUGAGUCA	208	19	3770	10	13	43	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4362438-4364034	Cluster_519	Pocillopora_meandrina_HIv1___Sc0000001	4362438	4364034	1597	7429	1345	0.9329654058419706	+	UACGAGCGAUAGAUCUUAAGCAUGUGCUGC	852	41	6714	115	54	67	438	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4364285-4365034	Cluster_520	Pocillopora_meandrina_HIv1___Sc0000001	4364285	4365034	750	1112	447	0.5971223021582733	.	GCGUUGUUUAAGCUGACAUCUUACUGAUA	92	13	968	7	13	26	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4428342-4428761	Cluster_521	Pocillopora_meandrina_HIv1___Sc0000001	4428342	4428761	420	527	58	1.0	+	AAUAAGCGGAGGAAAAG	68	526	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4445438-4445866	Cluster_522	Pocillopora_meandrina_HIv1___Sc0000001	4445438	4445866	429	117	30	0.9658119658119658	+	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	31	11	103	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4479220-4479714	Cluster_523	Pocillopora_meandrina_HIv1___Sc0000001	4479220	4479714	495	497	284	0.18309859154929578	-	UGUUCCGGUACAAAUUUUCCCUGCAUA	19	5	441	0	6	10	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4479834-4480826	Cluster_524	Pocillopora_meandrina_HIv1___Sc0000001	4479834	4480826	993	1150	481	0.08695652173913043	-	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	102	10	1062	2	4	20	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4480962-4482069	Cluster_525	Pocillopora_meandrina_HIv1___Sc0000001	4480962	4482069	1108	1731	562	0.039283651068746386	-	UAUAGUUCUUCUGUACUGGCUCAUUGUC	234	19	1658	8	8	13	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4483029-4484061	Cluster_526	Pocillopora_meandrina_HIv1___Sc0000001	4483029	4484061	1033	775	383	0.09935483870967741	-	UACUAGCUGCAAUCGACUCUUAAUUUGG	44	34	670	18	4	20	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4484096-4485189	Cluster_527	Pocillopora_meandrina_HIv1___Sc0000001	4484096	4485189	1094	1260	496	0.01984126984126984	-	UGAGACUCUCUUGUUGUAAUAUUGCUUG	94	11	1215	2	3	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4593132-4593547	Cluster_528	Pocillopora_meandrina_HIv1___Sc0000001	4593132	4593547	416	131	64	0.007633587786259542	-	UAAGAUCUGACUUUCACAUAGCUAGGA	9	4	122	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4745523-4745929	Cluster_529	Pocillopora_meandrina_HIv1___Sc0000001	4745523	4745929	407	99	62	0.8888888888888888	+	UGAUUGCAUCAUACUGGCUUUAACCUGC	9	1	89	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4872395-4873265	Cluster_530	Pocillopora_meandrina_HIv1___Sc0000001	4872395	4873265	871	685	172	0.472992700729927	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	173	38	542	13	14	28	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5026269-5026686	Cluster_531	Pocillopora_meandrina_HIv1___Sc0000001	5026269	5026686	418	170	25	0.0058823529411764705	-	GUCCUGGCAGGGUCGCCA	94	168	0	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5036295-5036724	Cluster_532	Pocillopora_meandrina_HIv1___Sc0000001	5036295	5036724	430	328	93	0.8963414634146342	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUC	112	26	265	8	8	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5073837-5074560	Cluster_533	Pocillopora_meandrina_HIv1___Sc0000001	5073837	5074560	724	625	90	0.04	-	UGGUAAAAUUCUGUUCAAAGUAGGCG	99	2	617	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5093741-5094167	Cluster_534	Pocillopora_meandrina_HIv1___Sc0000001	5093741	5094167	427	361	35	0.0	-	UGGUAAAAUUCUGUUCAAAGUAGGCUU	100	0	361	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5129936-5130336	Cluster_535	Pocillopora_meandrina_HIv1___Sc0000001	5129936	5130336	401	171	97	0.4619883040935672	.	UUUGAGGGACUUGUCCACAUAAAGCGU	23	40	89	26	12	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5144160-5145106	Cluster_536	Pocillopora_meandrina_HIv1___Sc0000001	5144160	5145106	947	5303	1017	0.6390722232698473	.	UGCAUUGUAAUCGGGAUAGACCUAUUGA	401	130	4545	59	62	190	317	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5204085-5204505	Cluster_537	Pocillopora_meandrina_HIv1___Sc0000001	5204085	5204505	421	142	89	1.0	+	GACAAUGACGUUGAAGACUGUGACGGAGACC	8	27	70	7	8	20	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5258486-5258899	Cluster_538	Pocillopora_meandrina_HIv1___Sc0000001	5258486	5258899	414	109	47	0.9908256880733946	+	CGGGGAGGUAGUGACG	29	89	8	1	4	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5482791-5483217	Cluster_539	Pocillopora_meandrina_HIv1___Sc0000001	5482791	5483217	427	198	47	0.0	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	66	58	134	1	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5559027-5559443	Cluster_540	Pocillopora_meandrina_HIv1___Sc0000001	5559027	5559443	417	158	66	0.012658227848101266	-	AAGGUCGGUGUCGCAAC	25	102	49	5	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5590662-5591125	Cluster_541	Pocillopora_meandrina_HIv1___Sc0000001	5590662	5591125	464	892	115	0.9988789237668162	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	282	27	849	5	5	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5593862-5594276	Cluster_542	Pocillopora_meandrina_HIv1___Sc0000001	5593862	5594276	415	107	17	0.9906542056074766	+	GUUUCUGUAGUGUAG	49	99	7	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5608175-5608632	Cluster_543	Pocillopora_meandrina_HIv1___Sc0000001	5608175	5608632	458	1232	208	1.0	+	CCACCCGGGGACGCCA	204	848	121	47	78	111	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5619912-5620331	Cluster_544	Pocillopora_meandrina_HIv1___Sc0000001	5619912	5620331	420	88	24	1.0	+	UCCUCGGUAGUAUAGUGGUAAGUAUCCC	32	22	66	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5625745-5626172	Cluster_545	Pocillopora_meandrina_HIv1___Sc0000001	5625745	5626172	428	227	17	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	171	0	227	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5635582-5636009	Cluster_546	Pocillopora_meandrina_HIv1___Sc0000001	5635582	5636009	428	1293	89	1.0	+	GUUUCUGUAGUGUAG	454	1079	183	9	3	18	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5637924-5638351	Cluster_547	Pocillopora_meandrina_HIv1___Sc0000001	5637924	5638351	428	220	15	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	168	0	220	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5647850-5648264	Cluster_548	Pocillopora_meandrina_HIv1___Sc0000001	5647850	5648264	415	124	24	1.0	+	GUUUCUGUAGUGUAG	52	113	11	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5669304-5669731	Cluster_549	Pocillopora_meandrina_HIv1___Sc0000001	5669304	5669731	428	221	16	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	168	1	220	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5675805-5676219	Cluster_550	Pocillopora_meandrina_HIv1___Sc0000001	5675805	5676219	415	139	25	0.9856115107913669	+	GUUUCUGUAGUGUAG	55	128	8	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5689306-5689734	Cluster_551	Pocillopora_meandrina_HIv1___Sc0000001	5689306	5689734	429	445	89	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	128	26	413	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5693899-5694317	Cluster_552	Pocillopora_meandrina_HIv1___Sc0000001	5693899	5694317	419	1439	48	0.9993050729673384	+	GUUUCUGUAGUGUAG	688	1433	4	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5697985-5698400	Cluster_553	Pocillopora_meandrina_HIv1___Sc0000001	5697985	5698400	416	1493	66	0.9973208305425318	+	GUUUCUGUAGUGUAG	1059	1468	19	5	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5746164-5746597	Cluster_554	Pocillopora_meandrina_HIv1___Sc0000001	5746164	5746597	434	2167	195	0.04476234425473004	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	516	730	1338	64	21	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5795956-5796534	Cluster_555	Pocillopora_meandrina_HIv1___Sc0000001	5795956	5796534	579	661	406	0.0030257186081694403	-	ACUUUCGUCGGCCUAGACA	22	290	183	58	48	45	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5796550-5797171	Cluster_556	Pocillopora_meandrina_HIv1___Sc0000001	5796550	5797171	622	469	330	0.01279317697228145	-	CUCUGUCCCGUGAAU	12	188	129	38	44	45	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5801163-5801731	Cluster_557	Pocillopora_meandrina_HIv1___Sc0000001	5801163	5801731	569	376	276	0.9920212765957447	+	UUGCUCUUGUAGAUUGAUGUGAAGAAUGC	5	115	119	33	38	41	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5839178-5839672	Cluster_558	Pocillopora_meandrina_HIv1___Sc0000001	5839178	5839672	495	1523	295	0.9862114248194354	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	303	14	1442	11	14	14	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5841909-5842324	Cluster_559	Pocillopora_meandrina_HIv1___Sc0000001	5841909	5842324	416	118	8	0.0	-	CUUGAAGCGGUUGGCG	60	118	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6004398-6004813	Cluster_560	Pocillopora_meandrina_HIv1___Sc0000001	6004398	6004813	416	390	44	1.0	+	AGCUGUGACCCUCGA	185	386	2	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6251647-6253381	Cluster_561	Pocillopora_meandrina_HIv1___Sc0000001	6251647	6253381	1735	2746	1110	0.956300072833212	+	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	90	21	2614	8	22	37	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6304414-6304830	Cluster_562	Pocillopora_meandrina_HIv1___Sc0000001	6304414	6304830	417	232	9	0.9827586206896551	+	GCUACUUUGACCUCAUC	223	228	2	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6367471-6367896	Cluster_563	Pocillopora_meandrina_HIv1___Sc0000001	6367471	6367896	426	178	71	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	23	1	169	3	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6400836-6401347	Cluster_564	Pocillopora_meandrina_HIv1___Sc0000001	6400836	6401347	512	279	57	0.44802867383512546	.	UCCGAGUGCUGCACCUUCUUUCAUGGGA	69	11	213	5	16	22	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6419212-6419640	Cluster_565	Pocillopora_meandrina_HIv1___Sc0000001	6419212	6419640	429	386	35	0.05181347150259067	-	UGACUUGAUUUUUUACGGCAUUUUGUAUC	315	9	370	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6511512-6512099	Cluster_566	Pocillopora_meandrina_HIv1___Sc0000001	6511512	6512099	588	641	236	0.7067082683307332	.	UGUUCUGGCAUUCUUCCGGUCUGUUUUC	53	16	579	3	7	17	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6593781-6594210	Cluster_567	Pocillopora_meandrina_HIv1___Sc0000001	6593781	6594210	430	1187	105	0.9974726200505476	+	UCUCAACCCAGUUCCAAGAUCACACCGUUA	302	381	800	4	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6676427-6676842	Cluster_568	Pocillopora_meandrina_HIv1___Sc0000001	6676427	6676842	416	129	24	0.05426356589147287	-	CUGUUACAGCCCGGCA	82	115	6	3	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6853838-6854260	Cluster_569	Pocillopora_meandrina_HIv1___Sc0000001	6853838	6854260	423	135	53	0.022222222222222223	-	UCGAAGGCUGUCUUCAAAUUUCACUUGAAC	13	1	126	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6854403-6854831	Cluster_570	Pocillopora_meandrina_HIv1___Sc0000001	6854403	6854831	429	169	37	0.005917159763313609	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	83	0	165	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6984277-6984706	Cluster_571	Pocillopora_meandrina_HIv1___Sc0000001	6984277	6984706	430	316	27	1.0	+	GACUGGUGCAUUGCUUGUCGGCGACUCAUG	154	2	312	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6989290-6989710	Cluster_572	Pocillopora_meandrina_HIv1___Sc0000001	6989290	6989710	421	142	67	0.8661971830985915	+	UCUGUAAACUCCGUAUUUAACAACAAAU	10	0	133	0	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7006571-7007371	Cluster_573	Pocillopora_meandrina_HIv1___Sc0000001	7006571	7007371	801	747	308	0.8460508701472557	+	UGAAUCGUGGGCAAAUGAUAUUCAAUGAUC	29	10	707	1	2	15	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7068685-7069114	Cluster_574	Pocillopora_meandrina_HIv1___Sc0000001	7068685	7069114	430	160	62	0.98125	+	AAACGAUUGAAUAGCAUAACUGAUGAACUA	17	0	154	1	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7069395-7070084	Cluster_575	Pocillopora_meandrina_HIv1___Sc0000001	7069395	7070084	690	622	326	0.8118971061093248	+	UAUGACGUUCCAGAAUCUUUGACAAAA	36	8	589	3	7	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7070254-7071028	Cluster_576	Pocillopora_meandrina_HIv1___Sc0000001	7070254	7071028	775	841	323	0.9381688466111772	+	UCCGUGACACAACGACUUUGCCUUGCUU	116	5	814	2	2	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7075985-7076412	Cluster_577	Pocillopora_meandrina_HIv1___Sc0000001	7075985	7076412	428	105	14	0.009523809523809525	-	UACCAAGGUCUUGUAGUCUAGUACAACU	60	0	104	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7279601-7280016	Cluster_578	Pocillopora_meandrina_HIv1___Sc0000001	7279601	7280016	416	139	60	0.34532374100719426	.	GUAGAAGCAAGAGCUUGAGACA	22	77	11	13	27	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7467089-7467518	Cluster_579	Pocillopora_meandrina_HIv1___Sc0000001	7467089	7467518	430	395	97	0.04556962025316456	-	UUGAACGUCACUGUCUGUCGGCGAUACGGA	63	17	358	2	10	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7469649-7470755	Cluster_580	Pocillopora_meandrina_HIv1___Sc0000001	7469649	7470755	1107	1995	612	0.5147869674185463	.	ACAUGACAAAACUACGAGCUUAGAAGA	312	7	1727	7	9	69	176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7472171-7472918	Cluster_581	Pocillopora_meandrina_HIv1___Sc0000001	7472171	7472918	748	944	392	0.2944915254237288	.	CUACAGAAAAUACAAACCGAUUGU	42	10	821	5	9	7	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7487307-7488525	Cluster_582	Pocillopora_meandrina_HIv1___Sc0000001	7487307	7488525	1219	1307	445	0.441469013006886	.	UUGACGAGUAUGGUGUACGAAAGAUGAGU	141	14	1202	16	13	15	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7491752-7493056	Cluster_583	Pocillopora_meandrina_HIv1___Sc0000001	7491752	7493056	1305	6081	1680	0.3063640848544647	.	AGGUGUAGAAUGUAAAAAGCAGCA	186	131	4870	72	42	272	694	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7494167-7495445	Cluster_584	Pocillopora_meandrina_HIv1___Sc0000001	7494167	7495445	1279	1845	885	0.7392953929539295	.	UAAACUCUUGGAACUUGGUUAAACAUCG	67	55	1636	24	19	30	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7498871-7499301	Cluster_585	Pocillopora_meandrina_HIv1___Sc0000001	7498871	7499301	431	98	30	0.02040816326530612	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	36	0	97	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7508339-7508769	Cluster_586	Pocillopora_meandrina_HIv1___Sc0000001	7508339	7508769	431	587	200	0.10732538330494037	-	UAACGUAGUGGUAUCCAUUGAACAAGUUC	84	6	506	1	2	8	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7509028-7510079	Cluster_587	Pocillopora_meandrina_HIv1___Sc0000001	7509028	7510079	1052	735	366	0.2503401360544218	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	28	7	685	5	5	22	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7511921-7512335	Cluster_588	Pocillopora_meandrina_HIv1___Sc0000001	7511921	7512335	415	306	182	0.803921568627451	+	UCUGUUCGCUUCCGUCGGGUUUUGGGC	38	11	267	4	3	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7512926-7513348	Cluster_589	Pocillopora_meandrina_HIv1___Sc0000001	7512926	7513348	423	162	80	0.0	-	UGAGCUACUGUGUGACGCCGGUCUUACUUU	17	0	156	0	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7520229-7520819	Cluster_590	Pocillopora_meandrina_HIv1___Sc0000001	7520229	7520819	591	12269	462	0.052816040427092675	-	UAAAAUCGUUUCAAUGCUCUGAGCACUGUU	2475	13	12029	19	9	126	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7521100-7521526	Cluster_591	Pocillopora_meandrina_HIv1___Sc0000001	7521100	7521526	427	157	51	0.1910828025477707	-	UCAGAAUUGGUGGGCUCAGUGGACGGCC	31	2	141	0	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7522572-7523021	Cluster_592	Pocillopora_meandrina_HIv1___Sc0000001	7522572	7523021	450	550	140	0.0036363636363636364	-	UCCGAUUUAAAAGAUUCUUUGUUUCCAGC	106	2	506	1	17	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7523238-7523895	Cluster_593	Pocillopora_meandrina_HIv1___Sc0000001	7523238	7523895	658	872	232	0.03096330275229358	-	UAGAAUAAAGCUGAUCUGCAGUUACUGC	183	24	824	1	6	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7529408-7530207	Cluster_594	Pocillopora_meandrina_HIv1___Sc0000001	7529408	7530207	800	1966	341	0.002034587995930824	-	UAAUGAUUUCCGUUCUAGCAGCCUCUGC	322	12	1920	5	2	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7533043-7534283	Cluster_595	Pocillopora_meandrina_HIv1___Sc0000001	7533043	7534283	1241	11210	1512	0.0296164139161463	-	UCUGACUGACUAACAGGAUAUCUGCUUC	714	48	10850	30	30	75	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7538234-7538725	Cluster_596	Pocillopora_meandrina_HIv1___Sc0000001	7538234	7538725	492	890	178	0.021348314606741574	-	UGUAACUCUAAACUUUGGAGCUUGGAUG	137	117	721	1	7	3	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7538914-7539330	Cluster_597	Pocillopora_meandrina_HIv1___Sc0000001	7538914	7539330	417	162	59	0.030864197530864196	-	UGAUAUAAUUAUGAAGGCUUUUGAAUGA	29	2	156	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7540437-7540867	Cluster_598	Pocillopora_meandrina_HIv1___Sc0000001	7540437	7540867	431	202	76	0.0049504950495049506	-	UCGUUCGAUUUGGGGGAAAUGGAUCCUGC	32	2	194	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7540920-7541875	Cluster_599	Pocillopora_meandrina_HIv1___Sc0000001	7540920	7541875	956	630	270	0.009523809523809525	-	UGUUCUAACUGUUAUCUUUGUGUUCCAGCU	53	8	609	0	3	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7542065-7542484	Cluster_600	Pocillopora_meandrina_HIv1___Sc0000001	7542065	7542484	420	139	76	0.014388489208633094	-	UCGGAAAAUUGUAUGUCGUGUGUGCCCUGU	16	5	128	2	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7542514-7542923	Cluster_601	Pocillopora_meandrina_HIv1___Sc0000001	7542514	7542923	410	295	141	0.006779661016949152	-	UGCUUUUGGUUUGUGGAUGGAACUGUCCGC	37	1	286	0	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7544193-7544782	Cluster_602	Pocillopora_meandrina_HIv1___Sc0000001	7544193	7544782	590	494	145	0.012145748987854251	-	UAAUCUCUGGUUCACUUUAGAUAUCACAUG	180	5	481	0	0	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7546750-7547162	Cluster_603	Pocillopora_meandrina_HIv1___Sc0000001	7546750	7547162	413	88	30	0.07954545454545454	-	UGUUCCAGUUGUACAUCAGAUACCUCU	16	0	80	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7550208-7550617	Cluster_604	Pocillopora_meandrina_HIv1___Sc0000001	7550208	7550617	410	206	93	0.05825242718446602	-	UGAAGAAACGAGACUCGUUUAACGAAACGA	34	3	189	0	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7558282-7559613	Cluster_605	Pocillopora_meandrina_HIv1___Sc0000001	7558282	7559613	1332	1693	650	0.002362669816893089	-	UAGAAAUGACGACUGCAGUUUUUACAUGC	64	28	1626	6	7	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7559618-7560418	Cluster_606	Pocillopora_meandrina_HIv1___Sc0000001	7559618	7560418	801	724	255	0.0055248618784530384	-	UCUUCCAUGACCAACCACA	64	110	595	6	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7560573-7561712	Cluster_607	Pocillopora_meandrina_HIv1___Sc0000001	7560573	7561712	1140	1719	331	0.011052937754508435	-	UCCAUCUUUCCGUCUUUGGUUCACCUC	500	77	1622	4	1	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7562095-7562863	Cluster_608	Pocillopora_meandrina_HIv1___Sc0000001	7562095	7562863	769	935	367	0.0042780748663101605	-	UGAACUGUGAAAUGUGUAUUAAACACCCUAC	91	23	882	5	5	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7563001-7563428	Cluster_609	Pocillopora_meandrina_HIv1___Sc0000001	7563001	7563428	428	144	53	0.006944444444444444	-	UUUUACAUUUUCCCUUCUCCUUCCAGUUU	23	5	133	2	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7564613-7565042	Cluster_610	Pocillopora_meandrina_HIv1___Sc0000001	7564613	7565042	430	211	58	0.0	-	AGUCCAUCCAAACUUUUGUAACUUAAUUUU	80	0	206	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7566258-7566686	Cluster_611	Pocillopora_meandrina_HIv1___Sc0000001	7566258	7566686	429	150	61	0.0	-	UGUAAAUUGUGUGGAAGGUCUAGCAUUUGUU	25	6	141	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7569380-7569807	Cluster_612	Pocillopora_meandrina_HIv1___Sc0000001	7569380	7569807	428	224	103	0.004464285714285714	-	UUUGAGCUGAGAACUUUUUAAUUCUGUU	28	14	201	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7570176-7572160	Cluster_613	Pocillopora_meandrina_HIv1___Sc0000001	7570176	7572160	1985	6948	1757	0.22135866436384571	.	UGGACGUACAUGCAGGAUUUGUCAUAC	799	99	6056	50	55	176	512	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7573577-7574769	Cluster_614	Pocillopora_meandrina_HIv1___Sc0000001	7573577	7574769	1193	3074	860	0.7482108002602472	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	507	38	2736	18	146	48	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7577524-7577952	Cluster_615	Pocillopora_meandrina_HIv1___Sc0000001	7577524	7577952	429	137	24	0.021897810218978103	-	UUGACUGACAGAAGAUCUGGAAACUGA	43	3	130	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7578201-7579791	Cluster_616	Pocillopora_meandrina_HIv1___Sc0000001	7578201	7579791	1591	21289	3022	0.14345436610456105	-	UACUUUCUGAUUGACUUGGAGUGUGGGG	1136	1155	18313	131	152	499	1039	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7592653-7593080	Cluster_617	Pocillopora_meandrina_HIv1___Sc0000001	7592653	7593080	428	166	70	0.9759036144578314	+	UUGUUAACUUUGUCUACCAGAUCUUAUC	18	37	120	3	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7595171-7595581	Cluster_618	Pocillopora_meandrina_HIv1___Sc0000001	7595171	7595581	411	160	66	0.59375	.	UAGGUAAAGUCUUUCUGUUAACAGAGUU	16	11	132	2	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7909734-7910162	Cluster_619	Pocillopora_meandrina_HIv1___Sc0000001	7909734	7910162	429	189	101	0.9841269841269841	+	AUCUGAACAAAAGAAAAGACACCAAGGAG	42	25	132	8	8	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8154885-8155313	Cluster_620	Pocillopora_meandrina_HIv1___Sc0000001	8154885	8155313	429	218	67	0.9770642201834863	+	UUGGAUUUAGGUGAGCUUGAAGAUUGUA	33	5	208	4	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8158124-8159082	Cluster_621	Pocillopora_meandrina_HIv1___Sc0000001	8158124	8159082	959	651	265	0.7296466973886329	.	UCACACUUUUGUCUCGCGAGUCGUUGGCA	52	17	585	7	11	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8214007-8214547	Cluster_622	Pocillopora_meandrina_HIv1___Sc0000001	8214007	8214547	541	599	162	0.7979966611018364	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	190	6	576	4	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8221611-8222035	Cluster_623	Pocillopora_meandrina_HIv1___Sc0000001	8221611	8222035	425	270	64	0.040740740740740744	-	AUGGACAGAACACAGGAAGUGCU	59	15	99	1	6	108	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8242888-8243317	Cluster_624	Pocillopora_meandrina_HIv1___Sc0000001	8242888	8243317	430	308	109	0.9025974025974026	+	UCAGCAAUACCUAAUUCUUCGUGUAGACGU	52	0	281	0	0	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8263506-8263929	Cluster_625	Pocillopora_meandrina_HIv1___Sc0000001	8263506	8263929	424	93	29	0.9247311827956989	+	UAACUUCAACUAGAUCAAAAUGCUCGUGA	49	3	86	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8270841-8271268	Cluster_626	Pocillopora_meandrina_HIv1___Sc0000001	8270841	8271268	428	213	113	0.0892018779342723	-	UAUUCCAAGAUUGGCCGUACCAGAGACA	23	2	203	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8286803-8289064	Cluster_627	Pocillopora_meandrina_HIv1___Sc0000001	8286803	8289064	2262	8769	2420	0.06591401528110388	-	UAUGUACGAUUUUAACUGGAAGAAACGUUU	504	145	8277	37	61	90	159	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8293722-8294136	Cluster_628	Pocillopora_meandrina_HIv1___Sc0000001	8293722	8294136	415	132	77	0.007575757575757576	-	UAUGUCACUGGAUCUAGUCGCUCGCACACU	10	3	123	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8294312-8294868	Cluster_629	Pocillopora_meandrina_HIv1___Sc0000001	8294312	8294868	557	497	205	0.02012072434607646	-	UGGAACCCUUUACGAUUGACAACAUCGUUU	60	3	475	1	2	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8295500-8295906	Cluster_630	Pocillopora_meandrina_HIv1___Sc0000001	8295500	8295906	407	229	120	0.5414847161572053	.	UGUUCUAUUGCCACUCUUGUUCUUUUGU	11	3	178	1	2	4	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8306212-8307604	Cluster_631	Pocillopora_meandrina_HIv1___Sc0000001	8306212	8307604	1393	2556	704	0.05868544600938967	-	UGAUUAUUGCGUCUUCAGUGACUUCUGA	263	31	2394	10	32	25	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8320152-8320577	Cluster_632	Pocillopora_meandrina_HIv1___Sc0000001	8320152	8320577	426	85	9	0.0	-	UAACCCGAGAACUGACACGUGAGUAGUC	54	0	77	0	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8324680-8325107	Cluster_633	Pocillopora_meandrina_HIv1___Sc0000001	8324680	8325107	428	107	14	0.0	-	UAACCCGAGAACUGACACGUGAGUAGUC	68	0	99	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8337585-8338057	Cluster_634	Pocillopora_meandrina_HIv1___Sc0000001	8337585	8338057	473	261	145	0.19157088122605365	-	UGAACGUGAUUUGUACGACCCACUCCGG	17	15	210	3	4	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8338134-8338823	Cluster_635	Pocillopora_meandrina_HIv1___Sc0000001	8338134	8338823	690	469	231	0.10021321961620469	-	UAAUCAUCUUCGAGUCGCGGAUACCUGA	54	8	408	9	4	22	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8340034-8340819	Cluster_636	Pocillopora_meandrina_HIv1___Sc0000001	8340034	8340819	786	1925	514	0.016103896103896103	-	UGCAUUCUCAAGUCGUGCUCUGUAACGG	135	34	1768	8	12	16	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8340967-8341392	Cluster_637	Pocillopora_meandrina_HIv1___Sc0000001	8340967	8341392	426	171	65	0.005847953216374269	-	UCAGACGUGAACUGUGGACCAUUAUC	16	1	165	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8343194-8343622	Cluster_638	Pocillopora_meandrina_HIv1___Sc0000001	8343194	8343622	429	196	47	0.0	-	UAAAGCUUGAACCUUCCAACACGUCCGACA	44	4	171	5	7	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8346606-8347331	Cluster_639	Pocillopora_meandrina_HIv1___Sc0000001	8346606	8347331	726	753	307	0.27091633466135456	.	UGAGAUUUCUGCAUUUCCUCAAGCACGU	71	9	644	6	10	35	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8351582-8352234	Cluster_640	Pocillopora_meandrina_HIv1___Sc0000001	8351582	8352234	653	319	97	0.003134796238244514	-	CCAGUAUCUGUUUGUUUAGUUCUAGAAUAUC	54	1	305	0	3	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8355699-8356143	Cluster_641	Pocillopora_meandrina_HIv1___Sc0000001	8355699	8356143	445	279	119	0.021505376344086023	-	UUGGCGUGUUUAAGUACUUCUGAUCUUGAC	57	9	267	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8359679-8360122	Cluster_642	Pocillopora_meandrina_HIv1___Sc0000001	8359679	8360122	444	450	131	0.3688888888888889	.	UGAUUCUUGUAAAAGCUUACCAGCUCCAUU	42	3	310	2	4	53	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8364198-8364609	Cluster_643	Pocillopora_meandrina_HIv1___Sc0000001	8364198	8364609	412	75	34	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	15	0	75	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8370312-8370827	Cluster_644	Pocillopora_meandrina_HIv1___Sc0000001	8370312	8370827	516	769	206	0.611183355006502	.	UGGAUUAUCAACAAUUGGAAAGAAGGACA	103	12	688	3	7	17	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8371249-8372173	Cluster_645	Pocillopora_meandrina_HIv1___Sc0000001	8371249	8372173	925	1301	534	0.006917755572636433	-	UGGUCUUUCUCGUCUGCUUUCUCGAUGGC	73	23	1202	8	3	40	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8373184-8373869	Cluster_646	Pocillopora_meandrina_HIv1___Sc0000001	8373184	8373869	686	728	239	0.0013736263736263737	-	UGAGUUUGUAGAAGCAAUUUGCCAUCUGC	67	11	699	1	6	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8384652-8385719	Cluster_647	Pocillopora_meandrina_HIv1___Sc0000001	8384652	8385719	1068	894	282	0.010067114093959731	-	UUCUUGUAUUCGAAGGCUGGCUGCAACUGC	139	19	850	4	5	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8386118-8387061	Cluster_648	Pocillopora_meandrina_HIv1___Sc0000001	8386118	8387061	944	7611	855	0.00420444094074366	-	UCGACAUCUUUUUGUGUGGGUCUACUGC	733	94	7404	12	12	16	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8394040-8394752	Cluster_649	Pocillopora_meandrina_HIv1___Sc0000001	8394040	8394752	713	616	166	0.003246753246753247	-	UAUCUUCUCGAGACUCAGGAAUUCCAGUGA	112	12	589	4	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8400205-8400676	Cluster_650	Pocillopora_meandrina_HIv1___Sc0000001	8400205	8400676	472	414	117	0.30917874396135264	.	CGUGUGAAUAUAGUAGCGUUGAUU	87	8	281	4	1	6	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8401927-8402354	Cluster_651	Pocillopora_meandrina_HIv1___Sc0000001	8401927	8402354	428	264	132	0.007575757575757576	-	UGUAUCAAAGGACUUCUUCCAGGUGGGAUA	32	11	248	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8403550-8403979	Cluster_652	Pocillopora_meandrina_HIv1___Sc0000001	8403550	8403979	430	169	75	0.0	-	UGUGUCUUUGCCACUAGAUGACUGAUGGUU	29	3	162	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8404969-8405395	Cluster_653	Pocillopora_meandrina_HIv1___Sc0000001	8404969	8405395	427	102	47	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	25	0	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8406664-8407092	Cluster_654	Pocillopora_meandrina_HIv1___Sc0000001	8406664	8407092	429	257	95	0.0	-	UGUUUUGUUCUGUGUCGCAUUCUGCAGGC	76	6	249	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8409239-8409797	Cluster_655	Pocillopora_meandrina_HIv1___Sc0000001	8409239	8409797	559	526	223	0.0019011406844106464	-	UGUGAUCACCACUGUCAAAGACAUAUUGG	28	3	516	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8410876-8411304	Cluster_656	Pocillopora_meandrina_HIv1___Sc0000001	8410876	8411304	429	347	168	0.0	-	UCUUCCUUAAUUAUUUUCAGACUGGUCCUA	22	32	283	4	1	4	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8411850-8412347	Cluster_657	Pocillopora_meandrina_HIv1___Sc0000001	8411850	8412347	498	378	140	0.36772486772486773	.	GACCAAAAAAAGAAGAAC	31	144	210	12	6	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8412512-8412917	Cluster_658	Pocillopora_meandrina_HIv1___Sc0000001	8412512	8412917	406	133	75	0.007518796992481203	-	UGCUACGUUUGACUGACGUUUAUUGGGC	28	9	121	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8413277-8413706	Cluster_659	Pocillopora_meandrina_HIv1___Sc0000001	8413277	8413706	430	305	67	0.2098360655737705	.	UGUUACGAAUCAAGAUCUAUUAAGCUCAAU	123	4	301	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8417245-8418232	Cluster_660	Pocillopora_meandrina_HIv1___Sc0000001	8417245	8418232	988	3299	668	0.043043346468626856	-	UUUUCAAGGAGGAUGUAUCCACUGUCGUU	409	54	3055	20	74	38	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8418536-8418954	Cluster_661	Pocillopora_meandrina_HIv1___Sc0000001	8418536	8418954	419	189	48	0.6507936507936508	.	UCUUUCCCAUUAAUUGUGAUUUUGUUCAUU	43	1	174	1	3	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8419703-8420738	Cluster_662	Pocillopora_meandrina_HIv1___Sc0000001	8419703	8420738	1036	490	217	0.05102040816326531	-	UCCGAUCACGCUUGAAGUAUUUCAGAAAC	46	13	447	4	6	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8525801-8526215	Cluster_663	Pocillopora_meandrina_HIv1___Sc0000001	8525801	8526215	415	101	17	0.0	-	UAUAUCAGAACGGAAU	25	101	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8667430-8667855	Cluster_664	Pocillopora_meandrina_HIv1___Sc0000001	8667430	8667855	426	95	32	0.9894736842105263	+	UGUGUAGAUAUGUCUUUUGGACAGGA	28	0	95	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8680444-8680874	Cluster_665	Pocillopora_meandrina_HIv1___Sc0000001	8680444	8680874	431	9588	404	0.0006257822277847309	-	GCGUUGGUGGUAUAGUGGUGAGCAUAGCU	3336	256	9127	19	37	109	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8689948-8690361	Cluster_666	Pocillopora_meandrina_HIv1___Sc0000001	8689948	8690361	414	104	46	0.0	-	GCCUCUGUAGCGUAAUGGA	34	68	14	9	5	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8708158-8709110	Cluster_667	Pocillopora_meandrina_HIv1___Sc0000001	8708158	8709110	953	11858	519	0.9903862371394839	+	UGACGUAUCUCUUCCCCGGGCUAUUGAGC	2923	193	11341	60	144	53	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8726443-8726870	Cluster_668	Pocillopora_meandrina_HIv1___Sc0000001	8726443	8726870	428	173	49	0.028901734104046242	-	UGAGUACACUGAUCAGUCGAAUACUGGC	42	7	164	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8740729-8741768	Cluster_669	Pocillopora_meandrina_HIv1___Sc0000001	8740729	8741768	1040	1547	279	0.010342598577892695	-	UCGGUUCCAUGAAUUCAGACAGUUUUG	355	27	1483	9	2	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8744793-8745221	Cluster_670	Pocillopora_meandrina_HIv1___Sc0000001	8744793	8745221	429	154	80	0.006493506493506494	-	UGUACAUCUUCCUGUUGGACACCCUGUUCAC	19	3	146	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8796864-8797286	Cluster_671	Pocillopora_meandrina_HIv1___Sc0000001	8796864	8797286	423	121	39	0.09917355371900827	-	UUCGCGUCUGAAGCUGUUAGAGU	49	10	14	2	10	84	1	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8814857-8815264	Cluster_672	Pocillopora_meandrina_HIv1___Sc0000001	8814857	8815264	408	105	55	0.009523809523809525	-	UUGAACUCGACCCAGUCA	11	18	85	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8852221-8852908	Cluster_673	Pocillopora_meandrina_HIv1___Sc0000001	8852221	8852908	688	572	197	0.008741258741258742	-	UCACAAACUGGAAAGUUAAGGGUGCAGGAG	87	7	554	1	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8852947-8853376	Cluster_674	Pocillopora_meandrina_HIv1___Sc0000001	8852947	8853376	430	533	97	0.04127579737335835	-	UAAAGCAAGACAACUAACUAGAAUGCGGUU	290	33	465	4	4	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8857011-8857439	Cluster_675	Pocillopora_meandrina_HIv1___Sc0000001	8857011	8857439	429	127	45	0.031496062992125984	-	UCCGAACUUUCCUGGUGUUGAUAGCCACA	26	6	120	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8858960-8859384	Cluster_676	Pocillopora_meandrina_HIv1___Sc0000001	8858960	8859384	425	147	52	0.0	-	UGCCAACGAUCUUCGGUCACGGGGAGCCA	37	0	141	1	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8861034-8861477	Cluster_677	Pocillopora_meandrina_HIv1___Sc0000001	8861034	8861477	444	409	141	0.46943765281173594	.	UCCGUAAUCUUGAAAUAUCUGAAUUCGCA	64	5	377	10	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8863493-8864217	Cluster_678	Pocillopora_meandrina_HIv1___Sc0000001	8863493	8864217	725	421	197	0.06175771971496437	-	UGAUGAUCUUGAAUUUUGGCGCUCCCAGA	35	8	395	2	1	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8867678-8868103	Cluster_679	Pocillopora_meandrina_HIv1___Sc0000001	8867678	8868103	426	131	51	0.0	-	UGAGUAAAGCUUCUGAUAUGAUAUGGC	29	3	122	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8870437-8870956	Cluster_680	Pocillopora_meandrina_HIv1___Sc0000001	8870437	8870956	520	405	130	0.0	-	CAUGUGCUGAUUUCUGGUCUUAAAAUGGU	106	3	397	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9243354-9243768	Cluster_681	Pocillopora_meandrina_HIv1___Sc0000001	9243354	9243768	415	410	9	0.0	-	GUUUCUGUAGUGUAG	287	410	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9449473-9449888	Cluster_682	Pocillopora_meandrina_HIv1___Sc0000001	9449473	9449888	416	110	10	0.9818181818181818	+	CGGGGUGCUGUAGUGU	34	109	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9474068-9474483	Cluster_683	Pocillopora_meandrina_HIv1___Sc0000001	9474068	9474483	416	138	13	0.9927536231884058	+	CCCACUUCUGACACCA	58	138	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9559277-9559692	Cluster_684	Pocillopora_meandrina_HIv1___Sc0000001	9559277	9559692	416	93	10	0.010752688172043012	-	UCCCGGCCAACGCACCA	54	93	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9727492-9728054	Cluster_685	Pocillopora_meandrina_HIv1___Sc0000001	9727492	9728054	563	393	194	0.002544529262086514	-	UAAAAAGCCUGGACCGAGCAAUAUGAAAUU	19	3	376	2	6	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9729005-9729434	Cluster_686	Pocillopora_meandrina_HIv1___Sc0000001	9729005	9729434	430	430	163	0.002325581395348837	-	UGUUUCCAAUCGAUUCAGCGUGGCUGUUUU	59	7	408	2	2	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9743290-9743705	Cluster_687	Pocillopora_meandrina_HIv1___Sc0000001	9743290	9743705	416	249	26	0.004016064257028112	-	AGGGUGCUGUCGGCU	139	248	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9769282-9770001	Cluster_688	Pocillopora_meandrina_HIv1___Sc0000001	9769282	9770001	720	316	162	0.9651898734177216	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	45	4	300	1	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9819040-9819870	Cluster_689	Pocillopora_meandrina_HIv1___Sc0000001	9819040	9819870	831	1577	147	0.016487000634115408	-	UUCAUGCUCUUGUUGUUCGACUGAACAAA	465	27	1531	2	7	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9828737-9829165	Cluster_690	Pocillopora_meandrina_HIv1___Sc0000001	9828737	9829165	429	112	44	0.017857142857142856	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	22	1	111	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9992821-9993241	Cluster_691	Pocillopora_meandrina_HIv1___Sc0000001	9992821	9993241	421	132	65	0.8106060606060606	+	UAACAGCUUAAGACGCGAACGAG	20	15	36	11	12	40	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10057875-10058286	Cluster_692	Pocillopora_meandrina_HIv1___Sc0000001	10057875	10058286	412	82	27	0.08536585365853659	-	GAAUAAGUGGGAGCAGCA	16	77	5	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10364318-10364733	Cluster_693	Pocillopora_meandrina_HIv1___Sc0000001	10364318	10364733	416	161	34	0.012422360248447204	-	GAAUCGGCCGCGGAUU	48	145	7	2	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10374967-10375503	Cluster_694	Pocillopora_meandrina_HIv1___Sc0000001	10374967	10375503	537	3691	561	0.9953942021132485	+	CACUGGAUCGAGGGAAACCAUGAAUUU	518	754	1701	113	535	359	229	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10500535-10500944	Cluster_695	Pocillopora_meandrina_HIv1___Sc0000001	10500535	10500944	410	97	31	0.24742268041237114	.	UGAUAACUUGUACGAGUACCGUUUACA	37	5	77	0	0	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10501153-10501564	Cluster_696	Pocillopora_meandrina_HIv1___Sc0000001	10501153	10501564	412	153	77	0.738562091503268	.	UUCUUUCCUUUGGUGCCUUUCUAUGGUU	12	5	121	4	3	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10532259-10532801	Cluster_697	Pocillopora_meandrina_HIv1___Sc0000001	10532259	10532801	543	1508	232	0.04376657824933687	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	294	21	1461	3	7	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10534800-10536306	Cluster_698	Pocillopora_meandrina_HIv1___Sc0000001	10534800	10536306	1507	5151	937	0.0959037080178606	-	UGGGAAACGGCUGUACUCGUCUAUGACG	617	29	4801	10	51	76	184	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10536547-10536974	Cluster_699	Pocillopora_meandrina_HIv1___Sc0000001	10536547	10536974	428	147	56	0.04081632653061224	-	UGAUUAAGAACGAUAAACUGGAACGUG	30	3	140	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10605374-10605803	Cluster_700	Pocillopora_meandrina_HIv1___Sc0000001	10605374	10605803	430	318	107	0.5817610062893082	.	UGCAUCUUCACUGCCACCUACAUUCUGUGU	78	2	273	2	0	4	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10674207-10675151	Cluster_701	Pocillopora_meandrina_HIv1___Sc0000001	10674207	10675151	945	932	243	0.08583690987124463	-	UGCUGUAUUUAAUUCUUCGAUCUUCUUAC	125	24	879	1	9	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10678513-10678939	Cluster_702	Pocillopora_meandrina_HIv1___Sc0000001	10678513	10678939	427	342	108	0.049707602339181284	-	UAAGACAUUGGCAUACUUGACAUACA	60	6	322	3	1	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10704605-10705790	Cluster_703	Pocillopora_meandrina_HIv1___Sc0000001	10704605	10705790	1186	3397	728	0.32087135707977626	.	UAUUUCAUCUUUGUCCACUGCGUGCCAA	443	23	3163	9	16	71	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10706039-10706594	Cluster_704	Pocillopora_meandrina_HIv1___Sc0000001	10706039	10706594	556	476	223	0.1092436974789916	-	UCAUACAAAUAGUCUUGGAGGGUGUGGU	22	13	442	2	7	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10706958-10707451	Cluster_705	Pocillopora_meandrina_HIv1___Sc0000001	10706958	10707451	494	545	188	0.07522935779816514	-	UGAAUCCGUAGAAAAUGCUUUGCUGAGU	49	10	498	9	0	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10709456-10709885	Cluster_706	Pocillopora_meandrina_HIv1___Sc0000001	10709456	10709885	430	246	71	0.0040650406504065045	-	UGCGUCGAUUUGUUCAACCCAAUGGAGAGC	53	0	245	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10722860-10723272	Cluster_707	Pocillopora_meandrina_HIv1___Sc0000001	10722860	10723272	413	98	44	0.0	-	UGACGAUUUUCGCGGCUCGAUUUUGU	12	1	96	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10737769-10739506	Cluster_708	Pocillopora_meandrina_HIv1___Sc0000001	10737769	10739506	1738	2725	1068	0.04110091743119266	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	92	16	2583	9	23	52	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10743364-10744210	Cluster_709	Pocillopora_meandrina_HIv1___Sc0000001	10743364	10744210	847	871	255	0.016073478760045924	-	UGCUAACACUUGUAGUCUGACCAGCCUUU	116	7	851	0	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10744527-10745157	Cluster_710	Pocillopora_meandrina_HIv1___Sc0000001	10744527	10745157	631	384	173	0.07291666666666667	-	UCUUCUGUUUGUAAGUCUGCUCCGUCUGC	24	3	353	2	0	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10746096-10746497	Cluster_711	Pocillopora_meandrina_HIv1___Sc0000001	10746096	10746497	402	144	80	0.04861111111111111	-	UAACUCACCGUGACUUUAUACACCUUCUUU	24	6	136	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10746516-10746934	Cluster_712	Pocillopora_meandrina_HIv1___Sc0000001	10746516	10746934	419	231	138	0.047619047619047616	-	UCAGUUCUGCUUAGAUUAUGGAUGCCGUG	12	1	210	0	1	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10747636-10748066	Cluster_713	Pocillopora_meandrina_HIv1___Sc0000001	10747636	10748066	431	289	67	0.0034602076124567475	-	UAGGAUUUAUUUGAGAUGCCCGUACGCUCUU	124	2	281	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10748750-10749587	Cluster_714	Pocillopora_meandrina_HIv1___Sc0000001	10748750	10749587	838	910	253	0.9593406593406594	+	UGAUUUCGCGUGCUCAACUCCGAUAAGAGC	150	6	898	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10763282-10763715	Cluster_715	Pocillopora_meandrina_HIv1___Sc0000001	10763282	10763715	434	1291	246	0.018590240123934933	-	UAUCUUCUGUAUGAUUUGGCUCGGUUGA	257	18	1223	26	5	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10771285-10771715	Cluster_716	Pocillopora_meandrina_HIv1___Sc0000001	10771285	10771715	431	162	50	0.012345679012345678	-	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	67	0	161	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10779541-10779965	Cluster_717	Pocillopora_meandrina_HIv1___Sc0000001	10779541	10779965	425	157	82	0.03821656050955414	-	UAACCGUAGCUCUGCUUCAAAUCUUUAACGU	18	0	150	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10783419-10784773	Cluster_718	Pocillopora_meandrina_HIv1___Sc0000001	10783419	10784773	1355	2660	817	0.31203007518796994	.	GGGUGCUCUGUUAGGACUUAAAACAAACA	143	25	2467	9	17	50	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10785297-10785725	Cluster_719	Pocillopora_meandrina_HIv1___Sc0000001	10785297	10785725	429	147	55	0.02040816326530612	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	23	1	145	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10789789-10790294	Cluster_720	Pocillopora_meandrina_HIv1___Sc0000001	10789789	10790294	506	1871	286	0.055050774986638164	-	UGAUUUCUGUAUUUAGUGUUGGCUGAUAC	690	7	1782	4	16	13	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10792415-10792844	Cluster_721	Pocillopora_meandrina_HIv1___Sc0000001	10792415	10792844	430	117	32	0.1111111111111111	-	UAGGAAAAGAUAUACACUACAAAGAAAAGU	62	4	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10824347-10824773	Cluster_722	Pocillopora_meandrina_HIv1___Sc0000001	10824347	10824773	427	92	34	0.9891304347826086	+	UCCUCGGUAGUAUGGUGGUGAGUAUCCC	21	14	75	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10833073-10833487	Cluster_723	Pocillopora_meandrina_HIv1___Sc0000001	10833073	10833487	415	109	11	0.08256880733944955	-	GAUGAGGCUCAUAAC	84	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10844844-10845261	Cluster_724	Pocillopora_meandrina_HIv1___Sc0000001	10844844	10845261	418	952	40	0.0021008403361344537	-	GUUUCUGUAGUGUAG	534	950	0	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10847770-10848195	Cluster_725	Pocillopora_meandrina_HIv1___Sc0000001	10847770	10848195	426	94	30	0.9787234042553191	+	GGCCUGUUGGUCUAGUGGCAUGAUUCU	33	11	80	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10853560-10853976	Cluster_726	Pocillopora_meandrina_HIv1___Sc0000001	10853560	10853976	417	223	37	0.004484304932735426	-	GGUCCGUUAGCUCAG	59	218	0	4	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10857028-10857496	Cluster_727	Pocillopora_meandrina_HIv1___Sc0000001	10857028	10857496	469	765	190	1.0	+	CGCGGGAGACCGGGGUUCGAUUCCCCG	152	79	633	6	13	28	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10862634-10863063	Cluster_728	Pocillopora_meandrina_HIv1___Sc0000001	10862634	10863063	430	6152	166	0.0	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	1685	1988	4142	2	2	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10906237-10906664	Cluster_729	Pocillopora_meandrina_HIv1___Sc0000001	10906237	10906664	428	99	32	0.0	-	UCCUCGGUAGUAUAGCGGUGAGUAUCCC	25	20	78	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10906811-10907223	Cluster_730	Pocillopora_meandrina_HIv1___Sc0000001	10906811	10907223	413	108	52	0.009259259259259259	-	CGCGGGAGACCGGGGUUCGAUUCCCCG	21	13	86	0	0	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10911480-10911894	Cluster_731	Pocillopora_meandrina_HIv1___Sc0000001	10911480	10911894	415	165	10	1.0	+	GUUUCUGUAGUGUAC	133	165	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11025769-11026190	Cluster_732	Pocillopora_meandrina_HIv1___Sc0000001	11025769	11026190	422	486	67	1.0	+	UCGACUCCCGGACAGGCCCCCA	88	323	3	24	96	40	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11038843-11039272	Cluster_733	Pocillopora_meandrina_HIv1___Sc0000001	11038843	11039272	430	859	104	0.008149010477299184	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	163	341	503	5	6	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11087414-11087828	Cluster_734	Pocillopora_meandrina_HIv1___Sc0000001	11087414	11087828	415	98	10	1.0	+	GGUCCGUUAGCUCAA	85	98	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11189266-11189746	Cluster_735	Pocillopora_meandrina_HIv1___Sc0000001	11189266	11189746	481	328	172	0.8048780487804879	+	UCAAAAUCGUAGCUUUACAGACGGCCAUU	13	9	232	12	7	22	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11198168-11198583	Cluster_736	Pocillopora_meandrina_HIv1___Sc0000001	11198168	11198583	416	27618	18	1.0	+	UUCCGAGGUCGCGGUA	27488	27617	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11270078-11270489	Cluster_737	Pocillopora_meandrina_HIv1___Sc0000001	11270078	11270489	412	248	152	0.875	+	UAAGAUUUACACACUGAUCGACCAUGU	15	11	211	2	6	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11270720-11271147	Cluster_738	Pocillopora_meandrina_HIv1___Sc0000001	11270720	11271147	428	346	174	0.8641618497109826	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	29	4	300	1	3	17	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11271522-11272459	Cluster_739	Pocillopora_meandrina_HIv1___Sc0000001	11271522	11272459	938	4017	710	0.9644012944983819	+	UGACUCGUCACUUUGUCUUGCUUAAGCA	645	16	3743	12	25	29	192	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11273329-11273755	Cluster_740	Pocillopora_meandrina_HIv1___Sc0000001	11273329	11273755	427	230	145	0.9565217391304348	+	UCAGAUCUUCCCAUGUACAUUCAUCGA	23	7	215	0	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11273848-11274825	Cluster_741	Pocillopora_meandrina_HIv1___Sc0000001	11273848	11274825	978	10973	768	0.9769434065433337	+	UAAGAUUUACACACUGAUCGACCAUGU	4705	57	10760	13	18	62	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11288741-11289156	Cluster_742	Pocillopora_meandrina_HIv1___Sc0000001	11288741	11289156	416	595	15	0.0	-	CCGGUCGUUGGGGCA	267	592	1	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11398900-11399348	Cluster_743	Pocillopora_meandrina_HIv1___Sc0000001	11398900	11399348	449	404	122	0.9801980198019802	+	UGUAUGUCUUUCUCUGCGAUUUGCUGAA	36	11	348	2	2	34	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11431674-11432104	Cluster_744	Pocillopora_meandrina_HIv1___Sc0000001	11431674	11432104	431	332	162	0.06626506024096386	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	19	1	320	0	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11432119-11432547	Cluster_745	Pocillopora_meandrina_HIv1___Sc0000001	11432119	11432547	429	258	136	0.10852713178294573	-	UAUCCUUAAUCUUGAUGGCUCGAGACGU	11	2	245	4	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11435203-11435632	Cluster_746	Pocillopora_meandrina_HIv1___Sc0000001	11435203	11435632	430	92	23	0.010869565217391304	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	36	0	91	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11568580-11568994	Cluster_747	Pocillopora_meandrina_HIv1___Sc0000001	11568580	11568994	415	96	56	0.9479166666666666	+	AAGGGUGAAAGGGCUGACGU	8	51	0	29	8	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11620987-11621590	Cluster_748	Pocillopora_meandrina_HIv1___Sc0000001	11620987	11621590	604	765	284	0.6640522875816993	.	UACGCCGAGUAAUUUUGCAUGCUGGACAACC	64	10	667	7	16	27	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11725732-11726201	Cluster_749	Pocillopora_meandrina_HIv1___Sc0000001	11725732	11726201	470	11643	624	0.0004294425835265825	-	UCGACUCCCGGUAUGGGAACCA	4522	1610	1765	2589	4762	496	421	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11733488-11733917	Cluster_750	Pocillopora_meandrina_HIv1___Sc0000001	11733488	11733917	430	144	63	0.05555555555555555	-	UGUUUACUUUCUUUACAACUUCGGAUACGGG	26	0	139	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11757170-11757576	Cluster_751	Pocillopora_meandrina_HIv1___Sc0000001	11757170	11757576	407	130	78	0.3076923076923077	.	UGAAAAACUGUGACCGAGGUA	12	70	6	32	16	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11768477-11768892	Cluster_752	Pocillopora_meandrina_HIv1___Sc0000001	11768477	11768892	416	125	6	1.0	+	CGGAAGGGGAAAGGAA	52	125	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11842953-11843383	Cluster_753	Pocillopora_meandrina_HIv1___Sc0000001	11842953	11843383	431	250	130	0.776	.	UGAUUUUCAUAUAAUCCUUGACCCUGA	18	9	187	8	20	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12103182-12104139	Cluster_754	Pocillopora_meandrina_HIv1___Sc0000001	12103182	12104139	958	685	310	0.8875912408759125	+	UGUGUUCAGUGUCACUAGGUCUUUUAC	53	25	639	5	3	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12104175-12104929	Cluster_755	Pocillopora_meandrina_HIv1___Sc0000001	12104175	12104929	755	5304	441	0.9817119155354449	+	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	2934	27	5163	11	32	46	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12266638-12267131	Cluster_756	Pocillopora_meandrina_HIv1___Sc0000001	12266638	12267131	494	739	222	0.058186738836265225	-	UGAGUAAAUUUUCUUUGAUGGUCGUCGA	67	9	701	1	5	5	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12269285-12269845	Cluster_757	Pocillopora_meandrina_HIv1___Sc0000001	12269285	12269845	561	446	195	0.06502242152466367	-	UAGGUGUUAUACUGUCUCUUGAUUUGG	41	38	359	7	12	22	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12356151-12357358	Cluster_758	Pocillopora_meandrina_HIv1___Sc0000001	12356151	12357358	1208	2122	722	0.12299717247879359	-	UGAUUACAGUGGCCUUCGAUGCCUGCAGGGC	154	33	1930	20	26	56	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12435335-12435765	Cluster_759	Pocillopora_meandrina_HIv1___Sc0000001	12435335	12435765	431	291	126	0.9621993127147767	+	UACUGGUACACUGGGAUCAUCUAGGU	30	16	251	2	4	15	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12435828-12436321	Cluster_760	Pocillopora_meandrina_HIv1___Sc0000001	12435828	12436321	494	1103	243	0.8349954669084315	+	UAAUGGGAAAACGAGAACAGCGUG	125	19	579	25	13	122	345	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12460756-12461252	Cluster_761	Pocillopora_meandrina_HIv1___Sc0000001	12460756	12461252	497	271	119	0.04797047970479705	-	UGGACAAACAGCAAUAUCACUACAAAGCUU	25	10	242	6	3	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12562726-12563322	Cluster_762	Pocillopora_meandrina_HIv1___Sc0000001	12562726	12563322	597	5609	509	0.0037439828846496702	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	874	14	5550	4	5	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12575043-12575457	Cluster_763	Pocillopora_meandrina_HIv1___Sc0000001	12575043	12575457	415	132	50	1.0	+	GUGCUGUAACGAUAA	33	56	62	3	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12578214-12578660	Cluster_764	Pocillopora_meandrina_HIv1___Sc0000001	12578214	12578660	447	369	95	0.5284552845528455	.	UGUCCACCCCCCACCGGCUGUC	61	24	243	17	69	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12716210-12718189	Cluster_765	Pocillopora_meandrina_HIv1___Sc0000001	12716210	12718189	1980	4786	1493	0.2248223986627664	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	236	82	4048	33	35	133	455	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12719606-12720798	Cluster_766	Pocillopora_meandrina_HIv1___Sc0000001	12719606	12720798	1193	3174	908	0.7586641461877757	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	549	44	2823	14	151	52	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12727790-12728205	Cluster_767	Pocillopora_meandrina_HIv1___Sc0000001	12727790	12728205	416	144	20	1.0	+	AGUGUGCGCUUAACU	38	144	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12750169-12750597	Cluster_768	Pocillopora_meandrina_HIv1___Sc0000001	12750169	12750597	429	99	35	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	35	0	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12752862-12753271	Cluster_769	Pocillopora_meandrina_HIv1___Sc0000001	12752862	12753271	410	95	50	0.25263157894736843	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	14	0	94	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12754673-12755102	Cluster_770	Pocillopora_meandrina_HIv1___Sc0000001	12754673	12755102	430	327	41	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	142	0	327	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12800573-12801009	Cluster_771	Pocillopora_meandrina_HIv1___Sc0000001	12800573	12801009	437	358	172	0.8994413407821229	+	UGAGUUGUCGUGAAGCGUGUGCAGGCAC	21	7	325	3	4	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12867780-12868303	Cluster_772	Pocillopora_meandrina_HIv1___Sc0000001	12867780	12868303	524	1926	366	0.2185877466251298	.	UAGGAUAUAUCACUUGCGUAAUUUACAACA	286	89	1709	20	47	27	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12872949-12873376	Cluster_773	Pocillopora_meandrina_HIv1___Sc0000001	12872949	12873376	428	131	39	0.9770992366412213	+	GUGGGAUAGAGCCUUGGAAUUUUGGACC	44	4	126	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12925240-12925665	Cluster_774	Pocillopora_meandrina_HIv1___Sc0000001	12925240	12925665	426	95	20	0.9578947368421052	+	UACCAUAGAACUUUCCGAGACAUUUC	46	0	91	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12938320-12938735	Cluster_775	Pocillopora_meandrina_HIv1___Sc0000001	12938320	12938735	416	306	35	0.9967320261437909	+	CCACGUUGGGCGCCA	144	293	13	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13091378-13091792	Cluster_776	Pocillopora_meandrina_HIv1___Sc0000001	13091378	13091792	415	96	24	0.10416666666666667	-	GGUGCGCUCUCGACG	36	92	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13141983-13142410	Cluster_777	Pocillopora_meandrina_HIv1___Sc0000001	13141983	13142410	428	103	8	1.0	+	UACCAAGGUCUUGUAGUCUAGUACAACU	71	0	103	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13144672-13145098	Cluster_778	Pocillopora_meandrina_HIv1___Sc0000001	13144672	13145098	427	467	50	0.9978586723768736	+	UGAUUGGUGCAUUUCGAUCCUUGCUGC	353	3	459	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13148777-13149204	Cluster_779	Pocillopora_meandrina_HIv1___Sc0000001	13148777	13149204	428	113	7	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	82	0	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13360013-13360439	Cluster_780	Pocillopora_meandrina_HIv1___Sc0000001	13360013	13360439	427	158	57	0.9620253164556962	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	36	0	152	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13536986-13537433	Cluster_781	Pocillopora_meandrina_HIv1___Sc0000001	13536986	13537433	448	449	210	0.024498886414253896	-	UCUUUCGUCUGUUGUCGAUAAAUGAGAGC	33	9	421	4	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13655505-13655921	Cluster_782	Pocillopora_meandrina_HIv1___Sc0000001	13655505	13655921	417	160	23	1.0	+	GAGUGCGCUCUUAACGG	54	160	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13673787-13674203	Cluster_783	Pocillopora_meandrina_HIv1___Sc0000001	13673787	13674203	417	163	21	1.0	+	GAGUGCGCUCUUAACGG	40	163	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13822443-13822984	Cluster_784	Pocillopora_meandrina_HIv1___Sc0000001	13822443	13822984	542	1264	265	0.5514240506329114	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	194	9	1208	6	3	14	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13871296-13871710	Cluster_785	Pocillopora_meandrina_HIv1___Sc0000001	13871296	13871710	415	111	20	0.009009009009009009	-	UGACAACUUUUGACG	49	111	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14013921-14014346	Cluster_786	Pocillopora_meandrina_HIv1___Sc0000001	14013921	14014346	426	225	101	0.19555555555555557	-	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	25	6	199	3	4	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14015157-14015566	Cluster_787	Pocillopora_meandrina_HIv1___Sc0000001	14015157	14015566	410	359	220	0.2395543175487465	.	UGUUCUUUCUCUGCUGUAAUAUAUGGC	20	3	292	6	3	21	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14017598-14018025	Cluster_788	Pocillopora_meandrina_HIv1___Sc0000001	14017598	14018025	428	182	84	0.07692307692307693	-	UAUACACGUUUAGGAUCUUCAUUUUUGA	72	1	177	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14311649-14312063	Cluster_789	Pocillopora_meandrina_HIv1___Sc0000001	14311649	14312063	415	114	25	0.043859649122807015	-	UUGUUUAUGCCGUGA	83	97	11	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14502165-14502594	Cluster_790	Pocillopora_meandrina_HIv1___Sc0000001	14502165	14502594	430	330	60	0.021212121212121213	-	GUGCUGCAGAUCUAAGGUUCAAUUAUCUU	113	10	310	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14757194-14757869	Cluster_791	Pocillopora_meandrina_HIv1___Sc0000001	14757194	14757869	676	7910	537	0.003413400758533502	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2195	16	7761	6	49	38	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14787117-14787542	Cluster_792	Pocillopora_meandrina_HIv1___Sc0000001	14787117	14787542	426	167	63	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	17	3	157	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14804465-14805185	Cluster_793	Pocillopora_meandrina_HIv1___Sc0000001	14804465	14805185	721	790	176	0.7860759493670886	.	UGAAACUCUGAUCUGAAAACAUUUGUC	129	15	747	10	5	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14844025-14844488	Cluster_794	Pocillopora_meandrina_HIv1___Sc0000001	14844025	14844488	464	3038	127	0.9950625411454904	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	1564	0	3029	0	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14871240-14871867	Cluster_795	Pocillopora_meandrina_HIv1___Sc0000001	14871240	14871867	628	255	136	0.39215686274509803	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	34	1	204	4	6	19	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14937302-14937732	Cluster_796	Pocillopora_meandrina_HIv1___Sc0000001	14937302	14937732	431	2023	187	0.002471576866040534	-	GCAGCAUCUGUACUACGCCUCGCACUCAGU	963	120	1798	20	57	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14959048-14959463	Cluster_797	Pocillopora_meandrina_HIv1___Sc0000001	14959048	14959463	416	257	25	0.980544747081712	+	GCUAAGGAGUGUGUA	87	253	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15033403-15033806	Cluster_798	Pocillopora_meandrina_HIv1___Sc0000001	15033403	15033806	404	79	28	0.05063291139240506	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	22	1	76	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15035106-15035533	Cluster_799	Pocillopora_meandrina_HIv1___Sc0000001	15035106	15035533	428	188	78	0.015957446808510637	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	23	7	175	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15227525-15228110	Cluster_800	Pocillopora_meandrina_HIv1___Sc0000001	15227525	15228110	586	793	247	0.07818411097099622	-	UGGAUUCUAUGACCUGAAUUGAGCA	105	8	761	5	3	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15228296-15228850	Cluster_801	Pocillopora_meandrina_HIv1___Sc0000001	15228296	15228850	555	658	162	0.2948328267477204	.	CGCUAUGUGACAUCCCUGGACAAAGUUCC	141	9	568	14	3	25	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15230069-15230772	Cluster_802	Pocillopora_meandrina_HIv1___Sc0000001	15230069	15230772	704	1066	289	0.8789868667917449	+	UAUAAUGGCACUUUCCUAUCUUCUGGCC	82	7	1001	4	7	14	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15257323-15258019	Cluster_803	Pocillopora_meandrina_HIv1___Sc0000001	15257323	15258019	697	773	244	0.7878395860284605	.	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	117	17	723	3	2	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15258549-15258949	Cluster_804	Pocillopora_meandrina_HIv1___Sc0000001	15258549	15258949	401	204	126	0.8921568627450981	+	UGGAAAUACUUAAAGGAGAUAAGACGU	13	2	190	1	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15302473-15302902	Cluster_805	Pocillopora_meandrina_HIv1___Sc0000001	15302473	15302902	430	192	20	0.9947916666666666	+	AAAGAAAGAAGUACCUAACUGAACUAGAUG	111	1	190	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15440801-15442329	Cluster_806	Pocillopora_meandrina_HIv1___Sc0000001	15440801	15442329	1529	3552	755	0.9681869369369369	+	UCGACGUUGUACUUAUCCCAGGGUUUUGCA	184	57	3396	15	20	27	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15491596-15492021	Cluster_807	Pocillopora_meandrina_HIv1___Sc0000001	15491596	15492021	426	196	49	0.0	-	UUCCAUCACUGUUCUAGGUAACAUUA	80	0	195	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15572839-15573266	Cluster_808	Pocillopora_meandrina_HIv1___Sc0000001	15572839	15573266	428	131	45	1.0	+	GUGGCGAAAACUCUUGACAAGAUCCUGUCU	33	14	102	5	9	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15586985-15587400	Cluster_809	Pocillopora_meandrina_HIv1___Sc0000001	15586985	15587400	416	160	18	0.99375	+	GCUGGAUGAUGAGACA	135	153	1	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15682587-15683052	Cluster_810	Pocillopora_meandrina_HIv1___Sc0000001	15682587	15683052	466	453	163	0.8587196467991169	+	UGUGAUCUUAAAGAAUUGACGGGUUUA	52	4	431	2	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15688821-15689251	Cluster_811	Pocillopora_meandrina_HIv1___Sc0000001	15688821	15689251	431	162	66	0.7469135802469136	.	UAAGUUACAUUAACAAUUUUGAGCCUUUUGC	20	4	146	2	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15704078-15704486	Cluster_812	Pocillopora_meandrina_HIv1___Sc0000001	15704078	15704486	409	195	120	0.35384615384615387	.	ACUGGAUACAAAACUGCUCGAUGC	19	2	149	1	2	10	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15704563-15705308	Cluster_813	Pocillopora_meandrina_HIv1___Sc0000001	15704563	15705308	746	401	179	0.04738154613466334	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	43	9	383	1	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15740067-15740496	Cluster_814	Pocillopora_meandrina_HIv1___Sc0000001	15740067	15740496	430	945	113	0.0021164021164021165	-	AUGAAUCGGAAAAGAAUUACUUAAUGGGU	266	14	918	2	2	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15810876-15811543	Cluster_815	Pocillopora_meandrina_HIv1___Sc0000001	15810876	15811543	668	359	209	0.31754874651810583	.	AAAGAUCUGUAGAUUGUUGC	17	230	40	40	21	22	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16011328-16011743	Cluster_816	Pocillopora_meandrina_HIv1___Sc0000001	16011328	16011743	416	159	18	0.012578616352201259	-	GAGACUUGAAGCGGC	38	157	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16038032-16038460	Cluster_817	Pocillopora_meandrina_HIv1___Sc0000001	16038032	16038460	429	186	68	0.08602150537634409	-	AUCACACCAGAACUCCAUUUGCUAGAAGG	60	9	163	3	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16168785-16169202	Cluster_818	Pocillopora_meandrina_HIv1___Sc0000001	16168785	16169202	418	196	90	0.1326530612244898	-	GCUGCGAUGGCCGAGUGG	45	165	18	3	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16290834-16291249	Cluster_819	Pocillopora_meandrina_HIv1___Sc0000001	16290834	16291249	416	215	159	1.0	+	UCACUGAUGGGACAAGAUU	5	61	100	12	13	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16350397-16350800	Cluster_820	Pocillopora_meandrina_HIv1___Sc0000001	16350397	16350800	404	88	31	0.09090909090909091	-	AGCUGAAGAAACUUCUAUUGAACAUGU	38	5	77	2	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16427830-16428246	Cluster_821	Pocillopora_meandrina_HIv1___Sc0000001	16427830	16428246	417	172	16	0.9593023255813954	+	UGGCCUGAAAAAAAAAA	83	168	1	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17078271-17078693	Cluster_822	Pocillopora_meandrina_HIv1___Sc0000001	17078271	17078693	423	1979	139	0.020717534108135423	-	AAGAACACCCAAAAUAGCUGA	670	213	3	785	517	399	62	21	N	miR-9425_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000001:17106031-17106458	Cluster_823	Pocillopora_meandrina_HIv1___Sc0000001	17106031	17106458	428	144	18	1.0	+	UUACCAACGUAAUAAAAGUAGAUGACGU	95	0	144	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17545442-17545857	Cluster_824	Pocillopora_meandrina_HIv1___Sc0000001	17545442	17545857	416	104	14	1.0	+	CACGGCUGCGACACCA	38	101	1	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17567794-17568216	Cluster_825	Pocillopora_meandrina_HIv1___Sc0000001	17567794	17568216	423	199	114	0.03015075376884422	-	AGUACGCAUUGAACUCUAUAGCUGACA	33	52	84	11	17	24	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17658982-17659545	Cluster_826	Pocillopora_meandrina_HIv1___Sc0000001	17658982	17659545	564	1067	212	0.10965323336457357	-	UAUGAUCAAAUACUGGAUUUCCAUCAUGU	282	7	1022	4	2	6	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17698149-17699173	Cluster_827	Pocillopora_meandrina_HIv1___Sc0000001	17698149	17699173	1025	1351	425	0.997779422649889	+	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	130	13	1326	1	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17746216-17746632	Cluster_828	Pocillopora_meandrina_HIv1___Sc0000001	17746216	17746632	417	167	16	1.0	+	AUGUACAAUUCUAGACC	149	158	8	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17775013-17775433	Cluster_829	Pocillopora_meandrina_HIv1___Sc0000001	17775013	17775433	421	90	17	1.0	+	UUUCAUGGAUUGAGUGCUACUC	51	6	0	14	66	3	1	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17940877-17941425	Cluster_830	Pocillopora_meandrina_HIv1___Sc0000001	17940877	17941425	549	220	46	1.0	+	CCUGUGAAUACUUCUGGCAUUACUCAAGCC	75	1	200	4	2	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17949925-17950374	Cluster_831	Pocillopora_meandrina_HIv1___Sc0000001	17949925	17950374	450	315	99	0.9873015873015873	+	UGUAACAUCGUGUGACUUGAACGCUCUUUGC	61	2	300	4	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17956254-17956682	Cluster_832	Pocillopora_meandrina_HIv1___Sc0000001	17956254	17956682	429	153	67	0.0718954248366013	-	UAGGAAAAUUGAUCUGCUGAGCUAUUUGC	21	7	132	1	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17982143-17982566	Cluster_833	Pocillopora_meandrina_HIv1___Sc0000001	17982143	17982566	424	94	36	0.9893617021276596	+	UCUCAACUUACCAAAAACUCUACC	21	1	55	0	1	5	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18108927-18109341	Cluster_834	Pocillopora_meandrina_HIv1___Sc0000001	18108927	18109341	415	308	5	0.006493506493506494	-	GCGGAUGUGGCGGAA	242	308	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18120359-18120786	Cluster_835	Pocillopora_meandrina_HIv1___Sc0000001	18120359	18120786	428	97	12	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	67	0	96	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18465181-18465596	Cluster_836	Pocillopora_meandrina_HIv1___Sc0000001	18465181	18465596	416	238	18	0.9957983193277311	+	CCUUACGGCGGGGCCA	162	236	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18466749-18467165	Cluster_837	Pocillopora_meandrina_HIv1___Sc0000001	18466749	18467165	417	1619	57	0.9975293390982087	+	CCUUGCGGCGGGGCA	662	1613	4	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18469013-18469429	Cluster_838	Pocillopora_meandrina_HIv1___Sc0000001	18469013	18469429	417	2047	105	0.0029311187103077674	-	CCUUACGGCGGGGCC	986	2007	21	6	9	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18473692-18474189	Cluster_839	Pocillopora_meandrina_HIv1___Sc0000001	18473692	18474189	498	1401	98	0.0	-	CCUUACGGCGGGGCA	433	1362	17	13	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18474274-18474689	Cluster_840	Pocillopora_meandrina_HIv1___Sc0000001	18474274	18474689	416	612	50	0.0032679738562091504	-	CCUUUCGGCGGGGCU	257	611	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18476707-18477122	Cluster_841	Pocillopora_meandrina_HIv1___Sc0000001	18476707	18477122	416	242	11	1.0	+	CCUUACGGCGGGGCCA	175	242	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18480082-18480873	Cluster_842	Pocillopora_meandrina_HIv1___Sc0000001	18480082	18480873	792	3843	326	0.0033827738745771533	-	CCUUUCGGCGGGGCC	1099	3637	44	42	35	60	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18490588-18491002	Cluster_843	Pocillopora_meandrina_HIv1___Sc0000001	18490588	18491002	415	263	138	0.9961977186311787	+	AGGACAGUCGCAGCA	74	135	67	25	16	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18606097-18606514	Cluster_844	Pocillopora_meandrina_HIv1___Sc0000001	18606097	18606514	418	1498	26	0.9986648865153538	+	UUCCGAGGUCGCGUUC	953	1497	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18622873-18623297	Cluster_845	Pocillopora_meandrina_HIv1___Sc0000001	18622873	18623297	425	163	106	0.12269938650306748	-	GUAGUUGAUAGAACUUUACAGGCAGACGU	21	42	85	9	4	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18718209-18718626	Cluster_846	Pocillopora_meandrina_HIv1___Sc0000001	18718209	18718626	418	228	21	0.9912280701754386	+	CUUUCCGAGGUCGCGCUC	75	228	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18863976-18864391	Cluster_847	Pocillopora_meandrina_HIv1___Sc0000001	18863976	18864391	416	215	65	0.9906976744186047	+	CCCAAGGAUGAAGAA	70	174	24	5	6	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19145766-19145858	Cluster_848	Pocillopora_meandrina_HIv1___Sc0000001	19145766	19145858	93	7152	318	1.0	+	CGCUCUUAAAAUCUCCUAGCUAU	1551	1757	84	631	1292	2632	756	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000001:19235018-19235447	Cluster_849	Pocillopora_meandrina_HIv1___Sc0000001	19235018	19235447	430	367	32	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	194	2	364	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19237350-19237983	Cluster_850	Pocillopora_meandrina_HIv1___Sc0000001	19237350	19237983	634	2912	368	0.8114697802197802	+	UGUUUCACACUUUACUACAUUCCCUGGU	803	48	2434	7	18	372	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19296526-19296940	Cluster_851	Pocillopora_meandrina_HIv1___Sc0000001	19296526	19296940	415	1145	9	0.9991266375545852	+	CUUUCCGAGGUCACG	1087	1145	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19318656-19319210	Cluster_852	Pocillopora_meandrina_HIv1___Sc0000001	19318656	19319210	555	416	134	0.3894230769230769	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	63	3	375	7	1	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19329321-19329746	Cluster_853	Pocillopora_meandrina_HIv1___Sc0000001	19329321	19329746	426	95	29	0.9368421052631579	+	UACAAACAACAGAAUGUUCGAACGGCUCGAC	26	5	86	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19339951-19340366	Cluster_854	Pocillopora_meandrina_HIv1___Sc0000001	19339951	19340366	416	86	7	0.03488372093023256	-	UAUAGACUUGGAAGCGGA	34	83	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19363841-19364257	Cluster_855	Pocillopora_meandrina_HIv1___Sc0000001	19363841	19364257	417	183	17	0.994535519125683	+	GACUGUUACAGCCCGGA	56	183	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19460429-19460910	Cluster_856	Pocillopora_meandrina_HIv1___Sc0000001	19460429	19460910	482	56323	820	0.9999644905278483	+	GGGGGACUAGCUCAGA	17943	47847	4753	1638	828	1085	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19495966-19496440	Cluster_857	Pocillopora_meandrina_HIv1___Sc0000001	19495966	19496440	475	843	294	0.26453143534994067	.	UGGACUUCGGCUCUAAAGGA	148	704	21	68	31	15	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19538058-19538488	Cluster_858	Pocillopora_meandrina_HIv1___Sc0000001	19538058	19538488	431	325	55	0.9938461538461538	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	162	4	320	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19618795-19619966	Cluster_859	Pocillopora_meandrina_HIv1___Sc0000001	19618795	19619966	1172	1888	598	0.9613347457627118	+	UGUGUCUUUCUCUUAGUGCUGUAAGGU	239	19	1774	14	11	22	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19620002-19620460	Cluster_860	Pocillopora_meandrina_HIv1___Sc0000001	19620002	19620460	459	273	176	0.9304029304029304	+	UCUGAUUUGGUUUGUGCUAGGUUGAGC	9	5	248	2	6	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19620561-19621068	Cluster_861	Pocillopora_meandrina_HIv1___Sc0000001	19620561	19621068	508	590	207	0.9389830508474576	+	UGAUAACUUGCUAUCGAUCGCGGUACU	80	4	557	5	3	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19621505-19622205	Cluster_862	Pocillopora_meandrina_HIv1___Sc0000001	19621505	19622205	701	985	384	0.8395939086294416	+	UGUUCCUUGAAUUCUGCGUGCACAAAGC	182	24	858	11	11	42	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19622523-19623533	Cluster_863	Pocillopora_meandrina_HIv1___Sc0000001	19622523	19623533	1011	2727	784	0.8023469013568023	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	257	34	2254	14	24	106	295	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19640322-19641984	Cluster_864	Pocillopora_meandrina_HIv1___Sc0000001	19640322	19641984	1663	2594	949	0.9367771781033153	+	UGUGUCUUUCUCUUAGUGCUGUAAGGU	235	47	2398	13	11	39	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19642083-19642591	Cluster_865	Pocillopora_meandrina_HIv1___Sc0000001	19642083	19642591	509	577	206	0.9376083188908145	+	UGAUAACUUGCUAUCGAUCGCGGUACU	56	1	559	0	1	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19643033-19644113	Cluster_866	Pocillopora_meandrina_HIv1___Sc0000001	19643033	19644113	1081	2581	893	0.8930647036032545	+	UGUUCCUUGAAUUCUGCGUGCACAAAGC	191	61	2334	22	44	56	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19644177-19645055	Cluster_867	Pocillopora_meandrina_HIv1___Sc0000001	19644177	19645055	879	1812	479	0.8482339955849889	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	264	11	1587	7	10	42	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19992950-19993378	Cluster_868	Pocillopora_meandrina_HIv1___Sc0000001	19992950	19993378	429	454	118	0.1299559471365639	-	UGGUUACUGAGGAAGAAAAGAAGU	88	15	257	27	7	16	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19995372-19996074	Cluster_869	Pocillopora_meandrina_HIv1___Sc0000001	19995372	19996074	703	1082	275	0.29944547134935307	.	UUAAGCAUUAUCGAAGGUAACCAGACUG	104	9	918	3	5	54	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20029267-20029683	Cluster_870	Pocillopora_meandrina_HIv1___Sc0000001	20029267	20029683	417	161	18	0.049689440993788817	-	CGGCCUGAAAAAAAAAA	135	156	1	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20109411-20109815	Cluster_871	Pocillopora_meandrina_HIv1___Sc0000001	20109411	20109815	405	220	179	0.9954545454545455	+	CCAAGGGACCUUUUUCUGAAAA	3	67	87	17	20	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20128710-20129245	Cluster_872	Pocillopora_meandrina_HIv1___Sc0000001	20128710	20129245	536	1642	393	0.0	-	AGGGAAGUGUAGCUCAAUUACAUGAGAGUU	162	445	976	59	47	56	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20129986-20130408	Cluster_873	Pocillopora_meandrina_HIv1___Sc0000001	20129986	20130408	423	538	113	0.0	-	AAAACAUGGCUGAUGAGGA	67	413	50	38	18	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20132880-20133296	Cluster_874	Pocillopora_meandrina_HIv1___Sc0000001	20132880	20133296	417	80	8	0.95	+	CGGCCUGAAAAAAAAAA	49	77	1	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20270769-20271189	Cluster_875	Pocillopora_meandrina_HIv1___Sc0000001	20270769	20271189	421	288	124	0.6215277777777778	.	UGUGUCCAAACGUCGGCUUUG	68	132	3	130	20	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20271286-20271710	Cluster_876	Pocillopora_meandrina_HIv1___Sc0000001	20271286	20271710	425	332	181	0.7349397590361446	.	UUUGGACACAUGUGCUGCGAG	35	172	11	118	22	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20348288-20348706	Cluster_877	Pocillopora_meandrina_HIv1___Sc0000001	20348288	20348706	419	235	156	0.9957446808510638	+	AGUGGCUGAUCUCAGUGAAAUU	14	56	94	24	24	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20349257-20349659	Cluster_878	Pocillopora_meandrina_HIv1___Sc0000001	20349257	20349659	403	243	180	0.9876543209876543	+	UUUUCUCUGAUAAUGUUGCUGUA	5	74	96	17	22	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20350380-20350797	Cluster_879	Pocillopora_meandrina_HIv1___Sc0000001	20350380	20350797	418	320	216	0.9875	+	AAAAGUAGUUUGAUUGUUCGGC	8	108	114	24	28	26	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20351603-20352019	Cluster_880	Pocillopora_meandrina_HIv1___Sc0000001	20351603	20352019	417	288	146	0.9826388888888888	+	GCUGUGCCUUUGUAGA	51	193	36	14	25	13	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20354485-20354907	Cluster_881	Pocillopora_meandrina_HIv1___Sc0000001	20354485	20354907	423	358	216	1.0	+	GACGGUCUGUAUUUUCACUGCA	15	100	124	32	39	35	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20375868-20376284	Cluster_882	Pocillopora_meandrina_HIv1___Sc0000001	20375868	20376284	417	113	10	0.0	-	UCCCCGCAUCUCCACCC	96	113	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20455816-20456244	Cluster_883	Pocillopora_meandrina_HIv1___Sc0000001	20455816	20456244	429	258	49	0.0	-	CCCGAGUUGUCUCCUGUCCGAGGUUCAGU	116	18	234	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20482530-20482945	Cluster_884	Pocillopora_meandrina_HIv1___Sc0000001	20482530	20482945	416	874	8	0.9988558352402745	+	GGGGUACCCGAACAUG	834	872	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20499339-20499904	Cluster_885	Pocillopora_meandrina_HIv1___Sc0000001	20499339	20499904	566	1295	371	0.06332046332046332	-	UCUUCCGGUCUGUUUUCGCUUUUUCUGGA	137	33	1191	7	7	32	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20501241-20502218	Cluster_886	Pocillopora_meandrina_HIv1___Sc0000001	20501241	20502218	978	1908	506	0.012578616352201259	-	UGCUGUAGUUUUUACUUCCGACUGAACAUU	149	8	1872	1	4	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20642790-20643214	Cluster_887	Pocillopora_meandrina_HIv1___Sc0000001	20642790	20643214	425	175	64	0.8857142857142857	+	AUUGGUGAAAGAGUAAGAUUCUGGC	61	6	131	2	4	2	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20646624-20647052	Cluster_888	Pocillopora_meandrina_HIv1___Sc0000001	20646624	20647052	429	205	41	0.22926829268292684	.	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	84	0	200	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20647431-20647855	Cluster_889	Pocillopora_meandrina_HIv1___Sc0000001	20647431	20647855	425	144	22	0.2013888888888889	.	UAGUUUGAAAAGAUAUCGCUCAGUG	62	3	117	5	0	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20971110-20971537	Cluster_890	Pocillopora_meandrina_HIv1___Sc0000001	20971110	20971537	428	211	107	0.933649289099526	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	40	1	203	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20971932-20972340	Cluster_891	Pocillopora_meandrina_HIv1___Sc0000001	20971932	20972340	409	162	106	0.5493827160493827	.	ACUGGAUACAAAACUGCUCGAUGC	23	0	107	1	1	9	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21206411-21206826	Cluster_892	Pocillopora_meandrina_HIv1___Sc0000001	21206411	21206826	416	245	37	0.9918367346938776	+	GAACCGGCCGUGGAU	40	244	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21215812-21216293	Cluster_893	Pocillopora_meandrina_HIv1___Sc0000001	21215812	21216293	482	3472	587	0.000576036866359447	-	CAGCGAUGAUGAAGACU	190	1671	647	287	157	421	289	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21278193-21278618	Cluster_894	Pocillopora_meandrina_HIv1___Sc0000001	21278193	21278618	426	444	127	0.0022522522522522522	-	AUGGUCUUGUGAAUUUUUGCUGGAUA	91	67	175	95	43	18	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21278917-21279464	Cluster_895	Pocillopora_meandrina_HIv1___Sc0000001	21278917	21279464	548	677	290	0.0	-	CUCUGAAUCAGACUUUCAAACAUCA	32	112	353	24	92	54	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21443208-21443614	Cluster_896	Pocillopora_meandrina_HIv1___Sc0000001	21443208	21443614	407	214	172	0.018691588785046728	-	UAUAGUCGACUCAAG	4	65	86	17	20	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21443789-21444196	Cluster_897	Pocillopora_meandrina_HIv1___Sc0000001	21443789	21444196	408	278	212	0.017985611510791366	-	UCUUGAACGACUGAAGGACGUGUGCCAAC	5	83	118	25	23	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21448381-21448799	Cluster_898	Pocillopora_meandrina_HIv1___Sc0000001	21448381	21448799	419	475	338	0.0	-	CGUGGACUGUCUACGUGAUCUGGACAAGA	8	158	182	38	49	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:43675-44102	Cluster_899	Pocillopora_meandrina_HIv1___Sc0000002	43675	44102	428	340	130	0.9352941176470588	+	UCUGUCUCCUCUGUAAUAAUGACACUGA	62	4	320	3	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:66073-66501	Cluster_900	Pocillopora_meandrina_HIv1___Sc0000002	66073	66501	429	284	17	0.014084507042253521	-	CGUGUUUGGAUUACGAUCACCUGAAGCGC	189	0	281	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:217180-217601	Cluster_901	Pocillopora_meandrina_HIv1___Sc0000002	217180	217601	422	84	34	0.9285714285714286	+	UAGGAUAUAUCACUUGCGUAAUUUACA	16	2	77	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:242838-243539	Cluster_902	Pocillopora_meandrina_HIv1___Sc0000002	242838	243539	702	277	142	0.9314079422382672	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	29	3	259	0	5	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:244769-245198	Cluster_903	Pocillopora_meandrina_HIv1___Sc0000002	244769	245198	430	242	140	0.8016528925619835	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	33	4	210	2	3	5	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:313284-313712	Cluster_904	Pocillopora_meandrina_HIv1___Sc0000002	313284	313712	429	2231	88	0.009861048857014791	-	UAACUUCAACUAGAUCGAAAUGCUUGUGA	1650	15	2210	3	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:340857-341277	Cluster_905	Pocillopora_meandrina_HIv1___Sc0000002	340857	341277	421	503	343	0.9920477137176938	+	GCCGAAGAAGAAGAGGACU	10	173	165	51	36	38	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:564384-564854	Cluster_906	Pocillopora_meandrina_HIv1___Sc0000002	564384	564854	471	1452	211	0.7431129476584022	.	UAGGAUAUAUCACUUGCGUAAUUUACA	281	30	1348	3	29	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:568135-569331	Cluster_907	Pocillopora_meandrina_HIv1___Sc0000002	568135	569331	1197	1344	568	0.09895833333333333	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	101	17	1246	4	10	23	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:569419-570207	Cluster_908	Pocillopora_meandrina_HIv1___Sc0000002	569419	570207	789	590	352	0.05084745762711865	-	UGCAAGAAGUACUGGGUUCACUGAGACC	14	7	552	1	3	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:570322-571232	Cluster_909	Pocillopora_meandrina_HIv1___Sc0000002	570322	571232	911	679	312	0.060382916053019146	-	UGGUUGUACUCUUAUACUCAAUGAUAUA	80	8	632	2	1	20	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:622212-623333	Cluster_910	Pocillopora_meandrina_HIv1___Sc0000002	622212	623333	1122	783	379	0.8850574712643678	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	41	14	664	4	7	8	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:626450-626878	Cluster_911	Pocillopora_meandrina_HIv1___Sc0000002	626450	626878	429	244	31	1.0	+	UCUGAUGACACUUUGGACUUGGGACUU	100	3	237	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:633884-634289	Cluster_912	Pocillopora_meandrina_HIv1___Sc0000002	633884	634289	406	188	135	0.8563829787234043	+	UGGUCUGUUUGUUCAUCGGUGAACUUAC	9	2	170	4	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:634394-634812	Cluster_913	Pocillopora_meandrina_HIv1___Sc0000002	634394	634812	419	290	192	0.9551724137931035	+	UGUACGAGUCAGACACGUGGAUACUUGC	13	0	272	1	0	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:635168-635584	Cluster_914	Pocillopora_meandrina_HIv1___Sc0000002	635168	635584	417	230	110	0.9130434782608695	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	20	4	207	4	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:636324-636751	Cluster_915	Pocillopora_meandrina_HIv1___Sc0000002	636324	636751	428	186	60	0.7311827956989247	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	32	1	153	0	4	2	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:645285-645712	Cluster_916	Pocillopora_meandrina_HIv1___Sc0000002	645285	645712	428	239	31	1.0	+	UGGCUCAACCAACUGAAGUGAAAUAUUC	185	0	235	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:651110-651535	Cluster_917	Pocillopora_meandrina_HIv1___Sc0000002	651110	651535	426	191	81	0.9319371727748691	+	UCUGUAGUAAACUGGCUGAUAUUUUC	32	1	178	0	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:663356-663783	Cluster_918	Pocillopora_meandrina_HIv1___Sc0000002	663356	663783	428	121	47	0.9917355371900827	+	UUAUUUGAGAUUUGGGAUAAUGUGUGUU	22	2	117	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:675552-675980	Cluster_919	Pocillopora_meandrina_HIv1___Sc0000002	675552	675980	429	191	63	0.15706806282722513	-	UGUUGCUUUACGGAUUUUGAGUUACCUUC	41	4	158	2	1	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:681628-682034	Cluster_920	Pocillopora_meandrina_HIv1___Sc0000002	681628	682034	407	170	87	0.3176470588235294	.	GACGAUCUUAACAAGGGCAUGGA	28	0	125	0	3	34	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:840308-840736	Cluster_921	Pocillopora_meandrina_HIv1___Sc0000002	840308	840736	429	225	134	0.16444444444444445	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	29	1	205	0	2	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:841971-842669	Cluster_922	Pocillopora_meandrina_HIv1___Sc0000002	841971	842669	699	256	132	0.08984375	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	21	1	244	1	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:961248-961779	Cluster_923	Pocillopora_meandrina_HIv1___Sc0000002	961248	961779	532	394	184	1.0	+	AAGCUGAGUUUCCAAUGCCUGGCAUGG	35	100	218	15	14	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:987966-988383	Cluster_924	Pocillopora_meandrina_HIv1___Sc0000002	987966	988383	418	99	13	0.98989898989899	+	GUGCUGGGUAACUUUGGUG	39	98	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1019617-1020044	Cluster_925	Pocillopora_meandrina_HIv1___Sc0000002	1019617	1020044	428	167	59	0.023952095808383235	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	50	0	157	0	2	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1170901-1171355	Cluster_926	Pocillopora_meandrina_HIv1___Sc0000002	1170901	1171355	455	496	97	0.532258064516129	.	CAGUACCUAAAUCUACAAAGCUUGACCGC	134	14	471	1	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1393702-1394123	Cluster_927	Pocillopora_meandrina_HIv1___Sc0000002	1393702	1394123	422	134	66	0.6417910447761194	.	CCUGGUCUUAAAUUCAUACGUUGUGAUA	21	1	102	3	3	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1394760-1395832	Cluster_928	Pocillopora_meandrina_HIv1___Sc0000002	1394760	1395832	1073	995	509	0.2201005025125628	.	UGAUUCAUCAGUAUUAAUGACUGUAGU	59	26	884	2	14	26	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1451020-1453080	Cluster_929	Pocillopora_meandrina_HIv1___Sc0000002	1451020	1453080	2061	2842	1149	0.9616467276565799	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	81	18	2703	8	26	44	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1457990-1458921	Cluster_930	Pocillopora_meandrina_HIv1___Sc0000002	1457990	1458921	932	918	341	0.049019607843137254	-	UAAUGACUUCAGAGUAGACAGAGACGGU	71	6	885	7	2	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1470195-1470624	Cluster_931	Pocillopora_meandrina_HIv1___Sc0000002	1470195	1470624	430	627	65	0.05422647527910686	-	UUAACUCCACGGUGCCAAUGACUUUCUU	158	12	595	3	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1576491-1576920	Cluster_932	Pocillopora_meandrina_HIv1___Sc0000002	1576491	1576920	430	314	70	0.9936305732484076	+	UAUUUGGAAAAGUGGUUCCCAAGACUGGG	60	24	283	3	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1603262-1603680	Cluster_933	Pocillopora_meandrina_HIv1___Sc0000002	1603262	1603680	419	137	65	0.927007299270073	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	23	1	125	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1603755-1604298	Cluster_934	Pocillopora_meandrina_HIv1___Sc0000002	1603755	1604298	544	388	169	0.9123711340206185	+	UGAGGACAGAUCUAAUGUACUGAAAAGCGUU	51	3	367	2	1	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1604450-1604878	Cluster_935	Pocillopora_meandrina_HIv1___Sc0000002	1604450	1604878	429	207	88	0.9710144927536232	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	50	1	199	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1605183-1605789	Cluster_936	Pocillopora_meandrina_HIv1___Sc0000002	1605183	1605789	607	401	172	0.940149625935162	+	UCCGAUAAGCAUUCGUUCUAAGCGUCCU	29	1	386	3	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1730183-1730612	Cluster_937	Pocillopora_meandrina_HIv1___Sc0000002	1730183	1730612	430	405	84	0.9506172839506173	+	UAGGUAAAGUCUUUCUGUUGACAGAGUU	146	10	388	0	4	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1795439-1795857	Cluster_938	Pocillopora_meandrina_HIv1___Sc0000002	1795439	1795857	419	128	77	0.765625	.	AAUCCAGACAAAGAAAUCAAAGAA	6	10	78	2	4	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1795902-1796330	Cluster_939	Pocillopora_meandrina_HIv1___Sc0000002	1795902	1796330	429	186	43	0.6236559139784946	.	AUGACGAAUAUGUUUACACGGUAGGCGGU	68	1	171	4	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1796433-1796862	Cluster_940	Pocillopora_meandrina_HIv1___Sc0000002	1796433	1796862	430	404	103	0.9653465346534653	+	AGCGAUUAGAAGAGCUAGACAUCAUCGAGA	128	12	317	2	6	28	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1991286-1992117	Cluster_941	Pocillopora_meandrina_HIv1___Sc0000002	1991286	1992117	832	564	228	0.9397163120567376	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	56	1	550	0	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1993636-1994062	Cluster_942	Pocillopora_meandrina_HIv1___Sc0000002	1993636	1994062	427	210	123	0.26666666666666666	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAA	9	1	193	0	4	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2021978-2022386	Cluster_943	Pocillopora_meandrina_HIv1___Sc0000002	2021978	2022386	409	87	25	0.9655172413793104	+	GAUUGGCUCUAAGCA	57	76	5	3	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2177166-2177595	Cluster_944	Pocillopora_meandrina_HIv1___Sc0000002	2177166	2177595	430	3278	117	1.0	+	UUCUCUCGAACAUUUUACUAUUUAGGUA	1852	12	3180	2	7	66	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2251895-2252812	Cluster_945	Pocillopora_meandrina_HIv1___Sc0000002	2251895	2252812	918	886	309	0.2178329571106095	.	UUCAACGUGUGUAGGACCUUUUUCAGCC	51	5	806	10	6	20	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2253915-2254342	Cluster_946	Pocillopora_meandrina_HIv1___Sc0000002	2253915	2254342	428	146	21	0.00684931506849315	-	UUCGACUGCUGUGUCCAUCUCGACUGAAGC	28	0	145	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2307761-2308165	Cluster_947	Pocillopora_meandrina_HIv1___Sc0000002	2307761	2308165	405	234	141	0.3803418803418803	.	UAUCUUCCACACUGAAGACUUUUGUCUGGU	7	1	203	2	5	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2308601-2309648	Cluster_948	Pocillopora_meandrina_HIv1___Sc0000002	2308601	2309648	1048	856	271	0.3072429906542056	.	UGAUACAAUUCUGGCGCUGAGCAAAUGCC	57	12	733	5	2	44	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2310173-2310599	Cluster_949	Pocillopora_meandrina_HIv1___Sc0000002	2310173	2310599	427	186	67	0.5483870967741935	.	AAUGGUAUUAAGCAUCGACGUGUA	17	0	154	0	1	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2310752-2311179	Cluster_950	Pocillopora_meandrina_HIv1___Sc0000002	2310752	2311179	428	155	38	0.12903225806451613	-	UUCGACUGCUGUGUCCAUCUCGACUGAAGC	18	1	148	0	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2471240-2471657	Cluster_951	Pocillopora_meandrina_HIv1___Sc0000002	2471240	2471657	418	367	266	0.0027247956403269754	-	UUGACAGGAUAUGUGCACUAGCUUAUACU	7	109	189	9	20	15	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2472284-2473102	Cluster_952	Pocillopora_meandrina_HIv1___Sc0000002	2472284	2473102	819	786	562	0.002544529262086514	-	CUGAUGAAGCUGUAGCUUAUGGUGCA	14	232	320	54	44	62	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2474111-2474556	Cluster_953	Pocillopora_meandrina_HIv1___Sc0000002	2474111	2474556	446	392	156	0.007653061224489796	-	GUCUGUCAGAUCGGACCAGAAACACUGGCC	94	50	274	5	14	36	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2583310-2583724	Cluster_954	Pocillopora_meandrina_HIv1___Sc0000002	2583310	2583724	415	88	10	0.9090909090909091	+	GCGACUGCUGCCGAC	71	84	2	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2630924-2631380	Cluster_955	Pocillopora_meandrina_HIv1___Sc0000002	2630924	2631380	457	783	173	0.9220945083014048	+	UUGUUGAUUUUCUCUUGAAGAGUUUGGA	112	23	738	1	1	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2853315-2853747	Cluster_956	Pocillopora_meandrina_HIv1___Sc0000002	2853315	2853747	433	535	81	0.9850467289719627	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	135	1	528	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2853977-2854400	Cluster_957	Pocillopora_meandrina_HIv1___Sc0000002	2853977	2854400	424	124	56	0.04838709677419355	-	ACUGGUACAAACAAAGGUCGAGUGGCCAUU	12	4	88	3	3	1	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3042300-3042714	Cluster_958	Pocillopora_meandrina_HIv1___Sc0000002	3042300	3042714	415	96	10	0.9895833333333334	+	GGAUCUGGCCCGGACUGGU	43	95	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3173969-3174387	Cluster_959	Pocillopora_meandrina_HIv1___Sc0000002	3173969	3174387	419	358	250	0.9972067039106145	+	GACGGAAAGGGAUUCUUGAUCA	7	141	124	24	26	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3174981-3175406	Cluster_960	Pocillopora_meandrina_HIv1___Sc0000002	3174981	3175406	426	256	187	0.99609375	+	GACCGUGCACUUCUAGAACUGCAGCU	7	82	108	10	23	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3175714-3176133	Cluster_961	Pocillopora_meandrina_HIv1___Sc0000002	3175714	3176133	420	204	144	0.9950980392156863	+	AAAGAUAAAAAGUGGAACAAGACU	10	53	88	9	17	9	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3179266-3179681	Cluster_962	Pocillopora_meandrina_HIv1___Sc0000002	3179266	3179681	416	247	192	0.9919028340080972	+	UUUGGAAAUCUGUUUGAA	5	84	85	19	16	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3313499-3314695	Cluster_963	Pocillopora_meandrina_HIv1___Sc0000002	3313499	3314695	1197	1312	539	0.0625	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	127	14	1225	1	6	24	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3314981-3315633	Cluster_964	Pocillopora_meandrina_HIv1___Sc0000002	3314981	3315633	653	1610	500	0.062111801242236024	-	UGUGUGUAUUAAUCGUAAGGAGUUCCUU	90	11	1538	4	4	13	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3315686-3316089	Cluster_965	Pocillopora_meandrina_HIv1___Sc0000002	3315686	3316089	404	117	70	0.13675213675213677	-	UGUAAUCAUACGCUUAGCCUCAGUGAACGCU	13	3	104	1	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3316170-3316596	Cluster_966	Pocillopora_meandrina_HIv1___Sc0000002	3316170	3316596	427	366	177	0.040983606557377046	-	UAGGUAAUGGCACAAACUGAGAGGCGU	30	6	341	2	0	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3316653-3317190	Cluster_967	Pocillopora_meandrina_HIv1___Sc0000002	3316653	3317190	538	1551	330	0.03481624758220503	-	UGAAGAAGUUGACUUGACUGGAACCACU	132	8	1496	4	9	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3354796-3355219	Cluster_968	Pocillopora_meandrina_HIv1___Sc0000002	3354796	3355219	424	231	162	0.23809523809523808	.	UUUGUCUGAUGUUCGUCCUCCCCAAGCU	8	9	197	5	1	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3374185-3374726	Cluster_969	Pocillopora_meandrina_HIv1___Sc0000002	3374185	3374726	542	1033	343	1.0	+	AGUGGAAGAGAACUUUGCAACAUUU	205	220	546	43	126	30	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3394607-3395035	Cluster_970	Pocillopora_meandrina_HIv1___Sc0000002	3394607	3395035	429	161	52	0.8944099378881988	+	AAUGGGAAAACGAGAACAGCGUGAGUGUU	55	4	136	2	0	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3452992-3453419	Cluster_971	Pocillopora_meandrina_HIv1___Sc0000002	3452992	3453419	428	87	22	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	0	86	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3594327-3594931	Cluster_972	Pocillopora_meandrina_HIv1___Sc0000002	3594327	3594931	605	1360	246	0.9058823529411765	+	UACUGUCUAUCCUAACUGCGCUUCGC	161	42	1255	4	12	27	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3595018-3595453	Cluster_973	Pocillopora_meandrina_HIv1___Sc0000002	3595018	3595453	436	279	56	0.7096774193548387	.	UUACAGAAAUUAAUGCGGGAAACAGUACU	147	15	253	1	2	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3633498-3633928	Cluster_974	Pocillopora_meandrina_HIv1___Sc0000002	3633498	3633928	431	149	41	1.0	+	UUCUGGCUAGCAAUUACUUCUGAAGAAGGUU	53	2	146	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3634440-3635614	Cluster_975	Pocillopora_meandrina_HIv1___Sc0000002	3634440	3635614	1175	1469	436	0.9836623553437712	+	UAUUCUAAUUCGGUGGUUUGACAUUCCAUU	111	19	1400	8	8	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3645599-3646028	Cluster_976	Pocillopora_meandrina_HIv1___Sc0000002	3645599	3646028	430	284	90	1.0	+	AUCAGUCUGAAUGAUCGUGAAAGGGGUUGG	61	2	271	1	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3650871-3651300	Cluster_977	Pocillopora_meandrina_HIv1___Sc0000002	3650871	3651300	430	4432	234	0.9981949458483754	+	AACCACUGUAGUAAUUGACUGUUACCU	1516	48	4377	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3651393-3652409	Cluster_978	Pocillopora_meandrina_HIv1___Sc0000002	3651393	3652409	1017	806	289	0.9900744416873449	+	UCUAUUCUGGAUAGCUUGCGAUUACUGUU	68	18	776	0	4	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3653308-3653801	Cluster_979	Pocillopora_meandrina_HIv1___Sc0000002	3653308	3653801	494	937	201	0.9957310565635006	+	UACAAAACCAGUAGAAAUGCAGAAAAAACA	106	51	838	13	5	18	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3653807-3656139	Cluster_980	Pocillopora_meandrina_HIv1___Sc0000002	3653807	3656139	2333	13815	2614	0.9786463988418386	+	UCUUCCUUUUAUCUCCUGUCCUUUUUAGA	569	817	12352	72	153	206	215	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3656956-3657999	Cluster_981	Pocillopora_meandrina_HIv1___Sc0000002	3656956	3657999	1044	30201	1841	0.9971524121717824	+	UUGUCUGGAUUGUACACUUUGAAGUGCA	2182	136	29722	60	79	74	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3659265-3659693	Cluster_982	Pocillopora_meandrina_HIv1___Sc0000002	3659265	3659693	429	303	124	0.9900990099009901	+	UCUUCCCAUCGUCUUCCAAAAUUUGAGGA	28	8	288	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3660444-3660896	Cluster_983	Pocillopora_meandrina_HIv1___Sc0000002	3660444	3660896	453	1477	215	1.0	+	UACUUCUUGACUGCCUUCAUACUUGUGGC	434	16	1446	2	4	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3666073-3667754	Cluster_984	Pocillopora_meandrina_HIv1___Sc0000002	3666073	3667754	1682	2014	799	0.19116186693147963	-	UCUAACGCGUUUGUCUGACAUCCCUUU	153	31	1773	18	38	37	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3668754-3670593	Cluster_985	Pocillopora_meandrina_HIv1___Sc0000002	3668754	3670593	1840	17931	2679	0.9005632703139814	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3151	311	15861	189	93	224	1253	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3674659-3675089	Cluster_986	Pocillopora_meandrina_HIv1___Sc0000002	3674659	3675089	431	173	65	0.9826589595375722	+	UGUUUUACUCCUGAAGAGCCAACUGGACGGG	28	5	166	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3675642-3676070	Cluster_987	Pocillopora_meandrina_HIv1___Sc0000002	3675642	3676070	429	197	38	1.0	+	UAAAGAAGAGAAAUGCUAAAGGAUUCAGC	79	0	197	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3676129-3676585	Cluster_988	Pocillopora_meandrina_HIv1___Sc0000002	3676129	3676585	457	11676	106	0.999743062692703	+	UGAUCUUCUUGAAUUUGUCAUUUACAAUA	4907	8	11637	0	8	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3676790-3677257	Cluster_989	Pocillopora_meandrina_HIv1___Sc0000002	3676790	3677257	468	2170	178	1.0	+	UUCCAUUUCACCAAAUAUUGAACCUGAAGG	482	1	2167	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3678079-3678480	Cluster_990	Pocillopora_meandrina_HIv1___Sc0000002	3678079	3678480	402	152	74	1.0	+	UGAAGUCAUCUGUUUCCAGGGAGCUGGC	36	1	150	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3678827-3679253	Cluster_991	Pocillopora_meandrina_HIv1___Sc0000002	3678827	3679253	427	255	162	0.9921568627450981	+	UGUUUGUAUCUUCUUUCUUCUUUCUUGA	9	2	246	3	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3679595-3680568	Cluster_992	Pocillopora_meandrina_HIv1___Sc0000002	3679595	3680568	974	843	344	0.9976275207591934	+	UAAUACCAAACAUGUCUGACUCUAUGCGUC	95	13	803	4	2	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3680865-3682503	Cluster_993	Pocillopora_meandrina_HIv1___Sc0000002	3680865	3682503	1639	3156	866	0.9901774397972116	+	UAUCACUUCUACAUGGACAGAACUUUUGGGA	261	36	3047	9	17	21	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3682594-3683419	Cluster_994	Pocillopora_meandrina_HIv1___Sc0000002	3682594	3683419	826	340	164	1.0	+	UGAUCUGUCUUACUUCUAUCAACGUUGAUA	24	5	324	1	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3684709-3685113	Cluster_995	Pocillopora_meandrina_HIv1___Sc0000002	3684709	3685113	405	225	123	0.9955555555555555	+	UUGGUCACUGUCUUUGCGCUAAGUUCACAUU	11	5	210	1	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3688785-3689581	Cluster_996	Pocillopora_meandrina_HIv1___Sc0000002	3688785	3689581	797	727	304	0.9862448418156808	+	UAAGUGCCAAAGACUGUUUCAGAACUUC	33	16	681	4	8	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3690290-3691344	Cluster_997	Pocillopora_meandrina_HIv1___Sc0000002	3690290	3691344	1055	508	184	0.9921259842519685	+	UUGGAUGUACCAAAUUUCUUGAGACUGGCA	64	11	490	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3694540-3695954	Cluster_998	Pocillopora_meandrina_HIv1___Sc0000002	3694540	3695954	1415	8409	1206	0.9989297181591152	+	UGUUGAUACCUGAGA	936	1123	7093	16	42	83	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3700620-3701262	Cluster_999	Pocillopora_meandrina_HIv1___Sc0000002	3700620	3701262	643	455	178	0.9912087912087912	+	UGGGAUCAAAGUACUUUAAUACAGGAGAUU	39	13	434	2	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3703878-3704313	Cluster_1000	Pocillopora_meandrina_HIv1___Sc0000002	3703878	3704313	436	358	95	1.0	+	UUGACUGCCUCUGUACCUGUGAGAAAUAAC	118	1	348	7	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3705344-3706092	Cluster_1001	Pocillopora_meandrina_HIv1___Sc0000002	3705344	3706092	749	796	278	0.9711055276381909	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	61	3	776	6	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3706387-3707908	Cluster_1002	Pocillopora_meandrina_HIv1___Sc0000002	3706387	3707908	1522	5261	1089	0.964075270861053	+	UGUUACUUUCAGUGGCUGUUCGAGGGGC	1150	39	4924	10	75	70	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3707943-3710875	Cluster_1003	Pocillopora_meandrina_HIv1___Sc0000002	3707943	3710875	2933	11140	2368	0.9789048473967684	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1267	94	10729	26	30	69	192	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3712606-3713228	Cluster_1004	Pocillopora_meandrina_HIv1___Sc0000002	3712606	3713228	623	385	123	0.987012987012987	+	UUCUAUGGUAUGCAUGUCAGCAUGACUGU	45	7	365	3	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3715928-3716824	Cluster_1005	Pocillopora_meandrina_HIv1___Sc0000002	3715928	3716824	897	9632	953	0.9573297342192691	+	UAUUGAACUUGGAGCAAACCUUGCCUAAA	1239	148	9053	48	117	98	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3718063-3719283	Cluster_1006	Pocillopora_meandrina_HIv1___Sc0000002	3718063	3719283	1221	1950	459	0.82	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	454	15	1821	4	13	28	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3719621-3720050	Cluster_1007	Pocillopora_meandrina_HIv1___Sc0000002	3719621	3720050	430	106	28	1.0	+	UGUGAGGAUAGCAGCUUUUGAAAAAACAUU	65	0	103	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3725150-3726723	Cluster_1008	Pocillopora_meandrina_HIv1___Sc0000002	3725150	3726723	1574	10494	1302	0.02801600914808462	-	UGUGCUUAAAAAUCUCUGGCCCAAAUACCUU	1503	51	10071	21	51	85	215	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3730451-3730897	Cluster_1009	Pocillopora_meandrina_HIv1___Sc0000002	3730451	3730897	447	520	160	0.5846153846153846	.	UGUGAACACGAUGAAACACCUUGCCAAA	45	6	416	2	9	53	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3730961-3731833	Cluster_1010	Pocillopora_meandrina_HIv1___Sc0000002	3730961	3731833	873	8143	986	0.8076875844283433	+	UACUUGUCGAAGUCCUGGCCCUCUAGCC	2122	66	7249	21	132	311	364	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3742641-3743070	Cluster_1011	Pocillopora_meandrina_HIv1___Sc0000002	3742641	3743070	430	141	47	0.9929078014184397	+	UGCGAUCGCCGCAAAGAACUUCCUUUACGA	60	1	136	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3745169-3745979	Cluster_1012	Pocillopora_meandrina_HIv1___Sc0000002	3745169	3745979	811	5864	484	0.9897680763983628	+	UGGGUUCUCGAUCACGUCUAAAUACACG	1184	50	5677	8	16	72	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3750061-3750938	Cluster_1013	Pocillopora_meandrina_HIv1___Sc0000002	3750061	3750938	878	1216	277	0.9893092105263158	+	UUAUUUGCACUAUUGUGGAAAAUUCCUGC	234	19	1191	4	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3751156-3751595	Cluster_1014	Pocillopora_meandrina_HIv1___Sc0000002	3751156	3751595	440	356	163	0.75	.	UCACGGUAGUAGUGUUGUUCAAU	24	8	290	5	4	29	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3765212-3765636	Cluster_1015	Pocillopora_meandrina_HIv1___Sc0000002	3765212	3765636	425	135	70	0.9185185185185185	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	19	0	132	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3766723-3767137	Cluster_1016	Pocillopora_meandrina_HIv1___Sc0000002	3766723	3767137	415	123	72	0.7804878048780488	.	UGUAUUGAUUGAACUUGUCGGUUGACCA	10	1	104	1	2	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3767202-3767611	Cluster_1017	Pocillopora_meandrina_HIv1___Sc0000002	3767202	3767611	410	99	49	0.7272727272727273	.	UGAGAUCUUUUUAGCUUGAGUUUGUUGA	31	1	86	1	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3767638-3768039	Cluster_1018	Pocillopora_meandrina_HIv1___Sc0000002	3767638	3768039	402	152	88	0.8881578947368421	+	UAAAUCUCUCGGGUCAAUACAGAUGCGUA	11	2	140	0	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3810076-3810492	Cluster_1019	Pocillopora_meandrina_HIv1___Sc0000002	3810076	3810492	417	220	34	0.004545454545454545	-	GGAUGUCUGACUGGC	61	220	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3841944-3842042	Cluster_1020	Pocillopora_meandrina_HIv1___Sc0000002	3841944	3842042	99	108035	317	9.256259545517656e-06	-	UUGUGUAACUCCCUAAGGAAGG	58934	8091	2	2881	96451	592	18	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:3888855-3889274	Cluster_1021	Pocillopora_meandrina_HIv1___Sc0000002	3888855	3889274	420	82	32	0.9878048780487805	+	CAGUGGGCUGUAGACUCAAACUUGGGG	15	10	60	3	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3903134-3903757	Cluster_1022	Pocillopora_meandrina_HIv1___Sc0000002	3903134	3903757	624	319	112	0.03761755485893417	-	AAGUUUGAAAGGGUUAAGGAACAAGAGC	40	12	265	11	3	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3941035-3941465	Cluster_1023	Pocillopora_meandrina_HIv1___Sc0000002	3941035	3941465	431	616	105	0.045454545454545456	-	UUAACCGUUAUAGUUUUGACUUGAAUAU	111	1	538	2	37	3	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3941650-3942338	Cluster_1024	Pocillopora_meandrina_HIv1___Sc0000002	3941650	3942338	689	2540	220	0.015354330708661417	-	CUGUGAACGAUGCCCU	561	1098	1319	5	24	77	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4018836-4019276	Cluster_1025	Pocillopora_meandrina_HIv1___Sc0000002	4018836	4019276	441	9587	1013	0.9952018358193387	+	GCACAUAUACUAAAAUUGGAACGAUA	480	1870	4236	752	669	1327	733	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4047421-4047933	Cluster_1026	Pocillopora_meandrina_HIv1___Sc0000002	4047421	4047933	513	2546	352	0.7930086410054988	.	AGAGAUCUUAGAAAACGAUCGUGUGUGCG	509	53	2433	1	7	26	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4048071-4048664	Cluster_1027	Pocillopora_meandrina_HIv1___Sc0000002	4048071	4048664	594	1044	264	0.05268199233716475	-	UAUGAAAGAUCUUGAUGUGGUGCGUCA	76	8	995	5	11	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4048723-4049272	Cluster_1028	Pocillopora_meandrina_HIv1___Sc0000002	4048723	4049272	550	664	205	0.30873493975903615	.	ACGAUUUAGAUGCCAAGAUUGAGAACCUCU	71	4	614	2	8	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4049287-4049710	Cluster_1029	Pocillopora_meandrina_HIv1___Sc0000002	4049287	4049710	424	147	70	0.21768707482993196	.	UUUUGUGUUAUCUUGUCUUGGAGA	16	6	100	4	0	12	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4232214-4232630	Cluster_1030	Pocillopora_meandrina_HIv1___Sc0000002	4232214	4232630	417	156	9	0.01282051282051282	-	CUUGCGAGCUGUUGCCA	83	156	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4472766-4473180	Cluster_1031	Pocillopora_meandrina_HIv1___Sc0000002	4472766	4473180	415	75	11	0.0	-	GACUUGAAGCGGUUGA	34	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4540570-4540973	Cluster_1032	Pocillopora_meandrina_HIv1___Sc0000002	4540570	4540973	404	139	102	0.6762589928057554	.	AGCUUCGUUAUGAGAUGAGAAUGA	7	18	78	11	8	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4567952-4568379	Cluster_1033	Pocillopora_meandrina_HIv1___Sc0000002	4567952	4568379	428	151	56	0.026490066225165563	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	0	149	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4727880-4728316	Cluster_1034	Pocillopora_meandrina_HIv1___Sc0000002	4727880	4728316	437	203	93	0.22167487684729065	.	UUCUAGUUCAGUCUUCAGGCUUGUGAUU	13	3	176	0	3	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4728531-4728984	Cluster_1035	Pocillopora_meandrina_HIv1___Sc0000002	4728531	4728984	454	307	108	0.048859934853420196	-	UGUUCUGUUAAUUGUUUGUCUGAGAUGC	44	6	277	1	4	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4807583-4808012	Cluster_1036	Pocillopora_meandrina_HIv1___Sc0000002	4807583	4808012	430	156	46	0.02564102564102564	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	22	1	151	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4843678-4844094	Cluster_1037	Pocillopora_meandrina_HIv1___Sc0000002	4843678	4844094	417	161	31	0.9503105590062112	+	GACUUGAAGUGGUUGGA	26	157	3	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4856630-4858806	Cluster_1038	Pocillopora_meandrina_HIv1___Sc0000002	4856630	4858806	2177	1911	814	0.967556253270539	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	86	15	1808	8	8	34	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4859814-4860855	Cluster_1039	Pocillopora_meandrina_HIv1___Sc0000002	4859814	4860855	1042	865	382	0.9549132947976878	+	UAACAUCUCUCUUUCCGACUUUAACAGC	53	4	824	4	3	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4860993-4862594	Cluster_1040	Pocillopora_meandrina_HIv1___Sc0000002	4860993	4862594	1602	3016	1187	0.8992042440318302	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	97	42	2757	27	26	58	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4992098-4992528	Cluster_1041	Pocillopora_meandrina_HIv1___Sc0000002	4992098	4992528	431	1810	133	0.0027624309392265192	-	UUGGAAUUCGAAGCAAGUAACAAUUGACAGG	419	3	1794	6	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5173097-5173512	Cluster_1042	Pocillopora_meandrina_HIv1___Sc0000002	5173097	5173512	416	228	18	0.9692982456140351	+	ACGGCUGCGACACCA	105	227	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5433888-5434317	Cluster_1043	Pocillopora_meandrina_HIv1___Sc0000002	5433888	5434317	430	351	52	0.002849002849002849	-	UUCCAUGACUCUGUUUAAACGAAAACGAAC	207	0	347	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5496901-5497538	Cluster_1044	Pocillopora_meandrina_HIv1___Sc0000002	5496901	5497538	638	305	151	0.5442622950819672	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	32	3	244	3	10	22	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5604505-5604918	Cluster_1045	Pocillopora_meandrina_HIv1___Sc0000002	5604505	5604918	414	284	211	0.017605633802816902	-	CUUGUAACAAAGAUCGUGGGCA	8	113	90	18	28	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5605961-5606377	Cluster_1046	Pocillopora_meandrina_HIv1___Sc0000002	5605961	5606377	417	190	140	0.005263157894736842	-	AGAAAUUGUGUGCUUCGACA	5	69	57	20	17	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5647892-5648347	Cluster_1047	Pocillopora_meandrina_HIv1___Sc0000002	5647892	5648347	456	356	70	0.9943820224719101	+	UUCUGUUGUUUUUGUUCCCU	38	179	1	40	86	47	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5674036-5674458	Cluster_1048	Pocillopora_meandrina_HIv1___Sc0000002	5674036	5674458	423	129	57	0.007751937984496124	-	UCACUUUCCUGGCUGUCCAUGUUGAC	17	4	123	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5730888-5731313	Cluster_1049	Pocillopora_meandrina_HIv1___Sc0000002	5730888	5731313	426	217	104	0.9861751152073732	+	UGAUCCGGAGCGCUCCCGAACGCCUC	28	7	203	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5864725-5865274	Cluster_1050	Pocillopora_meandrina_HIv1___Sc0000002	5864725	5865274	550	717	243	0.5788005578800558	.	GGGAAUUAGAGCCUGUGGAACAGU	105	13	444	14	11	75	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5865631-5866439	Cluster_1051	Pocillopora_meandrina_HIv1___Sc0000002	5865631	5866439	809	1611	489	0.0037243947858473	-	UCGGCUAUUCACUCUAUGAGCGAUAUCAAU	170	8	1549	8	7	5	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5883572-5884385	Cluster_1052	Pocillopora_meandrina_HIv1___Sc0000002	5883572	5884385	814	414	215	0.8840579710144928	+	UGAUUUUGGAAUGUUGUUUACGUUGUG	18	9	384	2	0	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6062911-6063344	Cluster_1053	Pocillopora_meandrina_HIv1___Sc0000002	6062911	6063344	434	521	229	0.982725527831094	+	UCGAGAUCCUGAGCU	41	55	460	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6066733-6067219	Cluster_1054	Pocillopora_meandrina_HIv1___Sc0000002	6066733	6067219	487	210	60	0.18571428571428572	-	CCUUUCCGAGGUCGU	88	89	77	2	3	22	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6069257-6069690	Cluster_1055	Pocillopora_meandrina_HIv1___Sc0000002	6069257	6069690	434	317	105	0.9716088328075709	+	UGAUGAGAGGUAAUCUGGAGCCUGACC	65	1	306	3	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6072542-6072966	Cluster_1056	Pocillopora_meandrina_HIv1___Sc0000002	6072542	6072966	425	276	125	0.21739130434782608	.	AUGUGUUACAACCUAGUGAAAGACUCAGC	21	1	229	2	3	17	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6072968-6073528	Cluster_1057	Pocillopora_meandrina_HIv1___Sc0000002	6072968	6073528	561	313	140	0.8466453674121406	+	UGUAGUAUUUCCGAGCCUUUUCGCACUU	50	4	268	2	5	25	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6079695-6081472	Cluster_1058	Pocillopora_meandrina_HIv1___Sc0000002	6079695	6081472	1778	6069	1643	0.8947108255066732	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	339	59	5656	50	42	57	205	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6081680-6084218	Cluster_1059	Pocillopora_meandrina_HIv1___Sc0000002	6081680	6084218	2539	3626	1399	0.8612796469939327	+	UACUCGAAAUCUCCAAUGACUGCAUUUGA	239	49	3336	28	32	53	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6090515-6091327	Cluster_1060	Pocillopora_meandrina_HIv1___Sc0000002	6090515	6091327	813	672	103	1.0	+	UAAGACAAUAAUUGGUACUGCAACGAGUGU	72	0	672	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6094144-6095261	Cluster_1061	Pocillopora_meandrina_HIv1___Sc0000002	6094144	6095261	1118	5169	951	0.8564519249371252	+	UGAGAUUGUUAUUCCAUCCUCCUGGA	536	32	4605	15	17	377	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6100032-6101266	Cluster_1062	Pocillopora_meandrina_HIv1___Sc0000002	6100032	6101266	1235	1669	545	0.9239065308568005	+	UGACAUUACUCGUGGGUACCAAAACUGUGU	63	16	1543	5	15	41	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6102732-6103990	Cluster_1063	Pocillopora_meandrina_HIv1___Sc0000002	6102732	6103990	1259	5233	1167	0.7796674947448882	.	UUUCAAAUGCUUUUGUAGAUCAUCUCCAAA	457	98	4706	32	57	143	197	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6511195-6511674	Cluster_1064	Pocillopora_meandrina_HIv1___Sc0000002	6511195	6511674	480	794	272	0.018891687657430732	-	GCGCGGAUGAGCCUCACUGGUGUGGGGU	71	324	380	39	22	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6728488-6728905	Cluster_1065	Pocillopora_meandrina_HIv1___Sc0000002	6728488	6728905	418	333	20	0.0	-	CUUUCCGAGGUCGUG	126	333	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6783071-6783501	Cluster_1066	Pocillopora_meandrina_HIv1___Sc0000002	6783071	6783501	431	325	50	0.9753846153846154	+	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	102	0	318	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6892811-6894008	Cluster_1067	Pocillopora_meandrina_HIv1___Sc0000002	6892811	6894008	1198	11125	1352	0.8811685393258427	+	UACUUUCUGAUUGACUUGGAGUGUGGGG	1850	116	10091	40	49	215	614	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6894228-6894656	Cluster_1068	Pocillopora_meandrina_HIv1___Sc0000002	6894228	6894656	429	173	29	0.976878612716763	+	UUGACUGACAGAAGAUCUGGAAACUGAAGA	55	5	162	3	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7339211-7339638	Cluster_1069	Pocillopora_meandrina_HIv1___Sc0000002	7339211	7339638	428	81	23	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	21	1	80	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7342301-7342716	Cluster_1070	Pocillopora_meandrina_HIv1___Sc0000002	7342301	7342716	416	201	121	0.8507462686567164	+	UAAUCUUGAUGGCUCGAGACGUGGUAUCA	11	5	184	3	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7342738-7343167	Cluster_1071	Pocillopora_meandrina_HIv1___Sc0000002	7342738	7343167	430	289	141	0.9653979238754326	+	UGAUAACUGUACUCUUGAAAUUCAUCG	14	3	275	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7372934-7373361	Cluster_1072	Pocillopora_meandrina_HIv1___Sc0000002	7372934	7373361	428	149	44	0.959731543624161	+	UAAGUUGAUCUCCUACAGUUUGACAUGU	38	3	145	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7390574-7390990	Cluster_1073	Pocillopora_meandrina_HIv1___Sc0000002	7390574	7390990	417	480	31	0.0	-	GAGACUUGAAGCGGUG	223	478	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7745983-7746398	Cluster_1074	Pocillopora_meandrina_HIv1___Sc0000002	7745983	7746398	416	194	123	0.015463917525773196	-	CAUUGCUCGAGUUUUGACUGUUAUCA	19	50	99	10	17	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7970887-7971311	Cluster_1075	Pocillopora_meandrina_HIv1___Sc0000002	7970887	7971311	425	194	78	1.0	+	UAUUUUUAAUCUCUUCUAUACCCUCUUGGA	18	1	193	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8140572-8140991	Cluster_1076	Pocillopora_meandrina_HIv1___Sc0000002	8140572	8140991	420	81	33	1.0	+	AUGAUGUCGAGCGUUUUCGGAAUGGGCA	17	1	63	6	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8468347-8468765	Cluster_1077	Pocillopora_meandrina_HIv1___Sc0000002	8468347	8468765	419	144	9	0.0	-	AUGUAAGGAGAAGAUUUUU	120	143	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8530203-8530636	Cluster_1078	Pocillopora_meandrina_HIv1___Sc0000002	8530203	8530636	434	883	106	0.9818799546998868	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	314	4	869	0	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8530938-8531364	Cluster_1079	Pocillopora_meandrina_HIv1___Sc0000002	8530938	8531364	427	351	95	0.005698005698005698	-	AAUGGGAAAACGAGAACAGCGUG	34	6	181	8	5	74	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8797245-8797663	Cluster_1080	Pocillopora_meandrina_HIv1___Sc0000002	8797245	8797663	419	3161	124	1.0	+	UCACGUCGGGGUCACCA	848	3160	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8842763-8843460	Cluster_1081	Pocillopora_meandrina_HIv1___Sc0000002	8842763	8843460	698	454	200	0.32599118942731276	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	55	7	376	4	3	15	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8843642-8844334	Cluster_1082	Pocillopora_meandrina_HIv1___Sc0000002	8843642	8844334	693	827	93	0.018137847642079808	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGU	247	9	807	2	2	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8981901-8982315	Cluster_1083	Pocillopora_meandrina_HIv1___Sc0000002	8981901	8982315	415	97	10	0.9896907216494846	+	CGUGGAAGGUAGGUA	59	97	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9033889-9034316	Cluster_1084	Pocillopora_meandrina_HIv1___Sc0000002	9033889	9034316	428	245	158	0.9836734693877551	+	UGAAAUGCGAGAUGUAGUUGAUGAAGUCAAG	10	35	190	5	8	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9043627-9044105	Cluster_1085	Pocillopora_meandrina_HIv1___Sc0000002	9043627	9044105	479	9544	390	0.01519279128248114	-	GGAAAAUCCAGGACCUACAAUAUUUGAUGU	2958	34	9178	28	24	60	220	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9051075-9051502	Cluster_1086	Pocillopora_meandrina_HIv1___Sc0000002	9051075	9051502	428	195	86	0.010256410256410256	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	38	1	187	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9080238-9080665	Cluster_1087	Pocillopora_meandrina_HIv1___Sc0000002	9080238	9080665	428	610	54	0.003278688524590164	-	UGAAACUCUGAUCUGAAAAUAUUUGUC	238	0	608	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9153293-9153709	Cluster_1088	Pocillopora_meandrina_HIv1___Sc0000002	9153293	9153709	417	267	21	0.04868913857677903	-	UUCCACACUCAGGAUGU	239	253	9	1	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9166314-9166724	Cluster_1089	Pocillopora_meandrina_HIv1___Sc0000002	9166314	9166724	411	124	49	0.6774193548387096	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	28	4	111	1	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9167351-9167779	Cluster_1090	Pocillopora_meandrina_HIv1___Sc0000002	9167351	9167779	429	143	69	0.6853146853146853	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	56	11	117	9	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9253012-9253427	Cluster_1091	Pocillopora_meandrina_HIv1___Sc0000002	9253012	9253427	416	473	12	0.9957716701902748	+	GCUGGAUGAUGAGACG	446	473	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9556404-9556813	Cluster_1092	Pocillopora_meandrina_HIv1___Sc0000002	9556404	9556813	410	83	15	0.8554216867469879	+	UGGAUUAUCAUUUUUUGUUAGUGUUGGUA	36	4	76	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9690194-9690604	Cluster_1093	Pocillopora_meandrina_HIv1___Sc0000002	9690194	9690604	411	218	119	0.6926605504587156	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	22	106	48	37	16	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9784858-9785294	Cluster_1094	Pocillopora_meandrina_HIv1___Sc0000002	9784858	9785294	437	1237	168	0.9587712206952304	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	400	26	1173	8	6	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9791938-9792368	Cluster_1095	Pocillopora_meandrina_HIv1___Sc0000002	9791938	9792368	431	1345	104	0.0	-	CGAUCUAACAAGAACAAUAUGUGCUGACU	515	2	1334	1	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9806413-9806890	Cluster_1096	Pocillopora_meandrina_HIv1___Sc0000002	9806413	9806890	478	1023	164	0.09286412512218964	-	UCAGGAUGCUUAAGGAAAACAGGUGGA	250	35	938	13	3	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9890408-9890826	Cluster_1097	Pocillopora_meandrina_HIv1___Sc0000002	9890408	9890826	419	199	98	0.9447236180904522	+	UACGUUUUAGUUCGAAUUGUUGGGACCU	17	5	187	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9983103-9983517	Cluster_1098	Pocillopora_meandrina_HIv1___Sc0000002	9983103	9983517	415	341	60	0.9472140762463344	+	CUUUCCGAGGUCGCA	196	312	11	5	6	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10079214-10079641	Cluster_1099	Pocillopora_meandrina_HIv1___Sc0000002	10079214	10079641	428	409	51	0.022004889975550123	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	231	2	402	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10097278-10097878	Cluster_1100	Pocillopora_meandrina_HIv1___Sc0000002	10097278	10097878	601	645	219	0.6062015503875969	.	UGCGAUUACAGAGGUGCGUUGGAACUCA	130	36	573	7	8	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10098007-10098437	Cluster_1101	Pocillopora_meandrina_HIv1___Sc0000002	10098007	10098437	431	583	165	0.9622641509433962	+	AAUGGGAAAACGAGAACAGCGUGA	64	10	325	19	6	99	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10178005-10178419	Cluster_1102	Pocillopora_meandrina_HIv1___Sc0000002	10178005	10178419	415	178	29	0.0	-	GUGGAAGGUAGGUCA	145	166	3	2	0	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10237076-10237574	Cluster_1103	Pocillopora_meandrina_HIv1___Sc0000002	10237076	10237574	499	426	59	0.018779342723004695	-	AAGAUGUCGAGCGUUUUCGGAACGAGUCG	129	3	413	4	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10291453-10291881	Cluster_1104	Pocillopora_meandrina_HIv1___Sc0000002	10291453	10291881	429	305	55	0.9868852459016394	+	UAGGACAACUGAGAAUCCACGUAGACUC	106	0	298	0	5	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10299732-10300146	Cluster_1105	Pocillopora_meandrina_HIv1___Sc0000002	10299732	10300146	415	84	5	0.0	-	GAUGAGGCUCAUAAC	80	82	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10363177-10363591	Cluster_1106	Pocillopora_meandrina_HIv1___Sc0000002	10363177	10363591	415	102	13	0.0	-	GAUGAGGCUCAUAAC	78	93	8	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10374599-10375013	Cluster_1107	Pocillopora_meandrina_HIv1___Sc0000002	10374599	10375013	415	265	23	0.0	-	GUGGAAGGUAGGUCA	227	254	7	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10423174-10423595	Cluster_1108	Pocillopora_meandrina_HIv1___Sc0000002	10423174	10423595	422	151	35	0.019867549668874173	-	GUGUGUGUGUGUCUCUCUGUCU	39	43	17	6	61	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10556606-10557024	Cluster_1109	Pocillopora_meandrina_HIv1___Sc0000002	10556606	10557024	419	164	15	0.0	-	GUGAGGGAACUGGCUCUUG	82	163	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10616330-10616744	Cluster_1110	Pocillopora_meandrina_HIv1___Sc0000002	10616330	10616744	415	85	11	0.8823529411764706	+	CGAGCUGUUCUUCCA	71	75	4	1	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10646046-10646461	Cluster_1111	Pocillopora_meandrina_HIv1___Sc0000002	10646046	10646461	416	129	50	0.3953488372093023	.	GAAGUUCUGGUUUAAA	65	93	20	1	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10652385-10652797	Cluster_1112	Pocillopora_meandrina_HIv1___Sc0000002	10652385	10652797	413	79	20	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	33	0	78	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10656468-10656897	Cluster_1113	Pocillopora_meandrina_HIv1___Sc0000002	10656468	10656897	430	295	35	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	116	0	295	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10657860-10658289	Cluster_1114	Pocillopora_meandrina_HIv1___Sc0000002	10657860	10658289	430	1770	165	0.9898305084745763	+	AUGGGUCUUAUUGAGCAUUACAAAACAGCA	755	24	1668	21	5	10	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10689132-10689550	Cluster_1115	Pocillopora_meandrina_HIv1___Sc0000002	10689132	10689550	419	139	97	0.9928057553956835	+	AACGUGAUUUGAGCAGA	10	64	30	10	17	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10689731-10690137	Cluster_1116	Pocillopora_meandrina_HIv1___Sc0000002	10689731	10690137	407	185	124	0.9945945945945946	+	CAUGUGACCAGUCUUGUAGAGAACA	5	71	61	10	13	21	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10725810-10726232	Cluster_1117	Pocillopora_meandrina_HIv1___Sc0000002	10725810	10726232	423	139	47	0.9856115107913669	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	18	2	135	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10726293-10726712	Cluster_1118	Pocillopora_meandrina_HIv1___Sc0000002	10726293	10726712	420	190	106	0.8526315789473684	+	UGAUAUAAAUGACAAAAAGUAAAGGGC	10	20	152	5	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10791059-10791611	Cluster_1119	Pocillopora_meandrina_HIv1___Sc0000002	10791059	10791611	553	242	84	0.9173553719008265	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	42	2	204	1	3	27	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10792850-10794071	Cluster_1120	Pocillopora_meandrina_HIv1___Sc0000002	10792850	10794071	1222	2061	511	0.7996118389131489	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	525	9	1939	7	11	28	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10810071-10810499	Cluster_1121	Pocillopora_meandrina_HIv1___Sc0000002	10810071	10810499	429	449	62	0.0200445434298441	-	UAAUCGACGAAUACAAUCCAGGUAUAACU	322	13	426	1	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10811366-10811817	Cluster_1122	Pocillopora_meandrina_HIv1___Sc0000002	10811366	10811817	452	1976	223	0.0010121457489878543	-	UGUGCAGUUGAAACAUAGACGCUUCUCGAGA	1105	8	1941	5	0	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10812246-10812676	Cluster_1123	Pocillopora_meandrina_HIv1___Sc0000002	10812246	10812676	431	183	62	0.01639344262295082	-	UCCGUACAAGAGUGUUUAAUCUGCGCAAACU	81	4	178	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10824578-10825173	Cluster_1124	Pocillopora_meandrina_HIv1___Sc0000002	10824578	10825173	596	3713	511	0.9752221922973336	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	651	50	3487	29	28	53	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10845722-10845816	Cluster_1125	Pocillopora_meandrina_HIv1___Sc0000002	10845722	10845816	95	11800	362	0.008898305084745763	-	UUGCCGUUAACCCAAAACCUUCA	4734	311	129	435	4992	5750	183	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:10993606-10994307	Cluster_1126	Pocillopora_meandrina_HIv1___Sc0000002	10993606	10994307	702	281	144	0.9039145907473309	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	31	6	264	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10994311-10994752	Cluster_1127	Pocillopora_meandrina_HIv1___Sc0000002	10994311	10994752	442	375	168	0.8853333333333333	+	UCAGAGAGGACGAUGCUAUUAACCCAGU	32	3	345	2	3	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10995537-10995965	Cluster_1128	Pocillopora_meandrina_HIv1___Sc0000002	10995537	10995965	429	244	141	0.8688524590163934	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	31	2	233	0	2	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11007210-11008706	Cluster_1129	Pocillopora_meandrina_HIv1___Sc0000002	11007210	11008706	1497	1855	755	0.8754716981132076	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	66	29	1707	4	20	40	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11009550-11010451	Cluster_1130	Pocillopora_meandrina_HIv1___Sc0000002	11009550	11010451	902	1011	328	0.9169139465875371	+	UGAGACUUGUUGUUGGGUAACUGACGUG	131	9	953	6	4	16	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11010488-11012492	Cluster_1131	Pocillopora_meandrina_HIv1___Sc0000002	11010488	11012492	2005	6486	1695	0.7889300030835646	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	422	241	5761	32	41	197	214	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11083015-11083429	Cluster_1132	Pocillopora_meandrina_HIv1___Sc0000002	11083015	11083429	415	173	15	1.0	+	CGGCCUGCCUCGACA	112	163	2	0	3	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11260574-11260989	Cluster_1133	Pocillopora_meandrina_HIv1___Sc0000002	11260574	11260989	416	258	21	0.0	-	AGGGACAGGUGGGCUU	86	258	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11350672-11351104	Cluster_1134	Pocillopora_meandrina_HIv1___Sc0000002	11350672	11351104	433	1062	246	0.9981167608286252	+	GAAGAUUGUGGGUUC	171	850	98	75	20	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11590390-11590812	Cluster_1135	Pocillopora_meandrina_HIv1___Sc0000002	11590390	11590812	423	210	127	0.45714285714285713	.	UCCGACUGUGAGUCCAAUGC	12	119	22	47	11	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11685056-11685474	Cluster_1136	Pocillopora_meandrina_HIv1___Sc0000002	11685056	11685474	419	620	24	0.9758064516129032	+	CGGCCUGAAAAAAAAAA	279	614	5	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11846947-11847603	Cluster_1137	Pocillopora_meandrina_HIv1___Sc0000002	11846947	11847603	657	793	300	0.13619167717528374	-	UGUAGAAUCAAUCUGUUACUAAGACACC	99	7	726	10	7	22	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11943384-11943811	Cluster_1138	Pocillopora_meandrina_HIv1___Sc0000002	11943384	11943811	428	138	37	0.11594202898550725	-	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	35	2	134	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12343138-12343591	Cluster_1139	Pocillopora_meandrina_HIv1___Sc0000002	12343138	12343591	454	549	81	0.0036429872495446266	-	UACGAUGUUGUCUUGUCUGCAAGC	105	25	8	102	119	115	180	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12358290-12358718	Cluster_1140	Pocillopora_meandrina_HIv1___Sc0000002	12358290	12358718	429	347	72	0.12968299711815562	-	UAGUGUUUGAAUUUUUGAAAGAAAUGGUC	217	27	303	13	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12381688-12382117	Cluster_1141	Pocillopora_meandrina_HIv1___Sc0000002	12381688	12382117	430	159	38	0.0	-	GUAAGAAACCACUUAGAACCAUGGAUGACA	74	2	147	0	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12509771-12510186	Cluster_1142	Pocillopora_meandrina_HIv1___Sc0000002	12509771	12510186	416	193	6	1.0	+	GCGGGUAUAGCUCAGU	163	192	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12664260-12664675	Cluster_1143	Pocillopora_meandrina_HIv1___Sc0000002	12664260	12664675	416	107	19	0.0	-	GAGUGUCCUGGGCUGCU	34	101	0	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12847776-12848204	Cluster_1144	Pocillopora_meandrina_HIv1___Sc0000002	12847776	12848204	429	213	69	0.9624413145539906	+	UGCGAUACCGGUGCAGUGCUCUACCAAUU	52	20	179	6	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12849337-12849760	Cluster_1145	Pocillopora_meandrina_HIv1___Sc0000002	12849337	12849760	424	451	56	0.004434589800443459	-	UUUGAGGCCUUGAACUUGCAGACA	58	56	1	21	80	154	139	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12946840-12947268	Cluster_1146	Pocillopora_meandrina_HIv1___Sc0000002	12946840	12947268	429	417	130	0.9688249400479616	+	UGUAGAAUCAAUCUGUUACUAAGACACC	87	3	391	10	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12947409-12947849	Cluster_1147	Pocillopora_meandrina_HIv1___Sc0000002	12947409	12947849	441	360	183	0.6527777777777778	.	UAAGCAAGGAUAUAGGUCGGUAAUUGUU	19	15	264	12	4	18	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12948045-12948462	Cluster_1148	Pocillopora_meandrina_HIv1___Sc0000002	12948045	12948462	418	200	129	0.8	+	UAUACCUUUGAUUCAUAGCCUUUCUGAUU	10	4	178	2	3	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12949694-12950122	Cluster_1149	Pocillopora_meandrina_HIv1___Sc0000002	12949694	12950122	429	162	70	0.08641975308641975	-	UAAGAUAUCGUUAACAACUCGAAGAAGCG	25	2	155	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12972851-12973278	Cluster_1150	Pocillopora_meandrina_HIv1___Sc0000002	12972851	12973278	428	335	193	0.6	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	39	90	196	24	7	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13203511-13203925	Cluster_1151	Pocillopora_meandrina_HIv1___Sc0000002	13203511	13203925	415	79	8	0.9493670886075949	+	CGUGACCGAUCCCGU	71	78	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13260092-13260514	Cluster_1152	Pocillopora_meandrina_HIv1___Sc0000002	13260092	13260514	423	120	45	0.15	-	AUUCCGGUUACCGAGAUCUCGGU	40	8	15	3	15	76	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13280874-13281378	Cluster_1153	Pocillopora_meandrina_HIv1___Sc0000002	13280874	13281378	505	863	309	0.0	-	AGGAAGUGAUGUUGUAAUUUGCA	48	287	323	30	86	106	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13313713-13314217	Cluster_1154	Pocillopora_meandrina_HIv1___Sc0000002	13313713	13314217	505	1702	563	0.9988249118683902	+	GUGGUUUGUGGGAACA	45	566	571	102	145	187	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13354138-13354564	Cluster_1155	Pocillopora_meandrina_HIv1___Sc0000002	13354138	13354564	427	155	47	0.04516129032258064	-	UUGGUGCAUUUCGAUCCUUGCUGUUC	28	3	151	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13453547-13453972	Cluster_1156	Pocillopora_meandrina_HIv1___Sc0000002	13453547	13453972	426	188	54	0.34574468085106386	.	UGAUCUACAUGAAACUAUUCUCACACC	34	0	174	1	3	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13526669-13527088	Cluster_1157	Pocillopora_meandrina_HIv1___Sc0000002	13526669	13527088	420	1477	34	0.0006770480704129993	-	CGGCCUGAAAAAAAAAA	1029	1410	26	19	7	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13553543-13553957	Cluster_1158	Pocillopora_meandrina_HIv1___Sc0000002	13553543	13553957	415	1207	26	0.0	-	CUUUCCGAGGUCACG	1178	1185	14	3	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13646850-13647264	Cluster_1159	Pocillopora_meandrina_HIv1___Sc0000002	13646850	13647264	415	133	12	0.03759398496240601	-	CCGUGUUGUAGGCUA	114	131	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13698199-13698626	Cluster_1160	Pocillopora_meandrina_HIv1___Sc0000002	13698199	13698626	428	247	107	0.9878542510121457	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	32	0	241	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13773137-13773566	Cluster_1161	Pocillopora_meandrina_HIv1___Sc0000002	13773137	13773566	430	804	53	0.01616915422885572	-	GUGUAGAUCAGCCGACUUCAACAUGUUUCA	330	1	789	3	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13812879-13813306	Cluster_1162	Pocillopora_meandrina_HIv1___Sc0000002	13812879	13813306	428	155	13	0.9935483870967742	+	UCGAGACGUGAGCUUGGGCCGCCUGUGA	107	2	153	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14200611-14201078	Cluster_1163	Pocillopora_meandrina_HIv1___Sc0000002	14200611	14201078	468	334	140	0.39820359281437123	.	AAUGGGAAAACGAGAAUAGCGUA	57	26	189	13	1	73	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14203895-14204318	Cluster_1164	Pocillopora_meandrina_HIv1___Sc0000002	14203895	14204318	424	103	50	0.0970873786407767	-	UGUAUUUGCUGAUCUAUUUGACAUCCUU	15	5	91	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14286362-14286775	Cluster_1165	Pocillopora_meandrina_HIv1___Sc0000002	14286362	14286775	414	127	86	0.9921259842519685	+	GACGGAGAAAGUGGAGCA	11	44	35	13	6	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14380365-14380782	Cluster_1166	Pocillopora_meandrina_HIv1___Sc0000002	14380365	14380782	418	117	68	0.5897435897435898	.	UUGGACUCACAGUCGGACGG	13	90	4	18	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14495754-14496184	Cluster_1167	Pocillopora_meandrina_HIv1___Sc0000002	14495754	14496184	431	572	56	0.9982517482517482	+	UACUAAGUAGGUGCCUUCGAGAUGUUUA	149	6	556	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14748982-14749487	Cluster_1168	Pocillopora_meandrina_HIv1___Sc0000002	14748982	14749487	506	593	164	0.7386172006745363	.	UUGGAACGUGUUGCUGAACGCUUGCG	99	39	470	13	36	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14800683-14801119	Cluster_1169	Pocillopora_meandrina_HIv1___Sc0000002	14800683	14801119	437	3080	304	0.0022727272727272726	-	UGUGACUGAAAAGAUCUUGAAGGAAUUUA	1447	55	2620	30	24	67	284	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14803374-14803892	Cluster_1170	Pocillopora_meandrina_HIv1___Sc0000002	14803374	14803892	519	433	206	0.057736720554272515	-	UUUCUGGUGAAUCUGGCAUAGCUGAGGCU	15	22	364	9	9	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14810100-14810527	Cluster_1171	Pocillopora_meandrina_HIv1___Sc0000002	14810100	14810527	428	211	86	0.4976303317535545	.	CACCCGGUCAAUUUUGCGUCAAAAAUAAUUU	18	6	165	2	2	8	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14815561-14815983	Cluster_1172	Pocillopora_meandrina_HIv1___Sc0000002	14815561	14815983	423	137	42	0.9854014598540146	+	UGAUUAAGAACGAUAAACUGGAACGUGU	30	3	130	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14816227-14817585	Cluster_1173	Pocillopora_meandrina_HIv1___Sc0000002	14816227	14817585	1359	1452	559	0.7768595041322314	.	UGGGAAACGGCUGUACUCGUCUAUGACGACC	69	13	1292	6	11	36	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14818833-14819261	Cluster_1174	Pocillopora_meandrina_HIv1___Sc0000002	14818833	14819261	429	217	114	0.48847926267281105	.	GCAAAUCGAAAUGAUGGUCGACUCCGGUGC	16	2	212	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14914674-14915087	Cluster_1175	Pocillopora_meandrina_HIv1___Sc0000002	14914674	14915087	414	142	91	0.5633802816901409	.	UUAUUUCUACAUAGAGUGAGCUCACAC	25	23	96	5	5	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14921910-14922397	Cluster_1176	Pocillopora_meandrina_HIv1___Sc0000002	14921910	14922397	488	556	101	0.01079136690647482	-	UUCAGAAUGAUCCUAGAUACGAACAUAGUC	48	2	539	2	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14957498-14958006	Cluster_1177	Pocillopora_meandrina_HIv1___Sc0000002	14957498	14958006	509	3443	260	0.06680220737728725	-	UACAGAACUAGACAACUAUAACAUAACGACU	1452	58	3180	0	27	135	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14968554-14968981	Cluster_1178	Pocillopora_meandrina_HIv1___Sc0000002	14968554	14968981	428	207	75	0.7632850241545893	.	UUCAUGCUCUCGUUGUUCGACUGAACGA	33	2	181	1	2	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15113131-15113638	Cluster_1179	Pocillopora_meandrina_HIv1___Sc0000002	15113131	15113638	508	620	160	0.7983870967741935	.	UCGGUUUUCGCAAUUCCAUUGAACGACA	61	9	580	2	5	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15290742-15291230	Cluster_1180	Pocillopora_meandrina_HIv1___Sc0000002	15290742	15291230	489	3578	531	0.9997205142537731	+	CACGUGACCUCUCUGAUCCUG	142	1043	1636	320	175	209	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15324522-15325223	Cluster_1181	Pocillopora_meandrina_HIv1___Sc0000002	15324522	15325223	702	270	138	0.9111111111111111	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	25	5	250	1	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15326453-15326881	Cluster_1182	Pocillopora_meandrina_HIv1___Sc0000002	15326453	15326881	429	260	143	0.8153846153846154	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	21	6	231	1	2	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15410169-15410609	Cluster_1183	Pocillopora_meandrina_HIv1___Sc0000002	15410169	15410609	441	637	146	0.16483516483516483	-	UCCUUCACUCCAGAAUGUUUGGCCUCU	73	12	571	5	2	25	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15749261-15749351	Cluster_1184	Pocillopora_meandrina_HIv1___Sc0000002	15749261	15749351	91	267	35	1.0	+	ACGCUAGGAAGGGAUGCCGGGA	162	12	4	32	199	18	2	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:15762578-15763408	Cluster_1185	Pocillopora_meandrina_HIv1___Sc0000002	15762578	15763408	831	4878	325	0.0	-	UGUUACCAGGUACUUCGCACUGA	1776	313	97	165	1344	2723	236	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15781900-15782431	Cluster_1186	Pocillopora_meandrina_HIv1___Sc0000002	15781900	15782431	532	535	188	0.0	-	AUGGAGGGUUAAGAAAGGGGAU	32	155	185	31	80	27	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15893989-15894539	Cluster_1187	Pocillopora_meandrina_HIv1___Sc0000002	15893989	15894539	551	218	79	0.9174311926605505	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	37	4	186	1	1	20	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15894892-15895490	Cluster_1188	Pocillopora_meandrina_HIv1___Sc0000002	15894892	15895490	599	1445	297	0.7986159169550173	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	489	12	1361	4	7	17	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15992082-15992491	Cluster_1189	Pocillopora_meandrina_HIv1___Sc0000002	15992082	15992491	410	233	111	0.9613733905579399	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	26	1	223	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15992813-15993292	Cluster_1190	Pocillopora_meandrina_HIv1___Sc0000002	15992813	15993292	480	344	144	0.9186046511627907	+	UCCAAUCACACACAGUUCUCCUGCGGC	75	2	319	4	4	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15993376-15993916	Cluster_1191	Pocillopora_meandrina_HIv1___Sc0000002	15993376	15993916	541	341	151	0.6920821114369502	.	UGCUUCAUUUUGGUUCUGUAGUAACACA	49	21	243	2	37	15	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15994673-15996166	Cluster_1192	Pocillopora_meandrina_HIv1___Sc0000002	15994673	15996166	1494	3252	843	0.9200492004920049	+	UAAGAUUUACACACUGAUCGACCAUGU	832	35	3069	30	11	38	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16076887-16077338	Cluster_1193	Pocillopora_meandrina_HIv1___Sc0000002	16076887	16077338	452	6218	193	0.013187520102926986	-	AUCUGUGGUUUUUUUAGGGUGG	1552	2177	5	480	3288	249	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16084908-16085406	Cluster_1194	Pocillopora_meandrina_HIv1___Sc0000002	16084908	16085406	499	9515	553	1.0	+	CUGAGACGAAGCAAACUGAUAUUU	3483	253	2891	117	365	1467	4422	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16086693-16087210	Cluster_1195	Pocillopora_meandrina_HIv1___Sc0000002	16086693	16087210	518	1324	385	0.9992447129909365	+	UGAGACGAAGCAAACUGAAAUUA	120	228	445	70	171	233	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16106559-16106650	Cluster_1196	Pocillopora_meandrina_HIv1___Sc0000002	16106559	16106650	92	2896	100	1.0	+	UGUUAUUUUUAUCGUCCAUUAGU	1136	1031	9	61	201	1564	30	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:16592025-16592431	Cluster_1197	Pocillopora_meandrina_HIv1___Sc0000002	16592025	16592431	407	145	79	0.8620689655172413	+	UGAACGACUUGAUCAGCAAUUUGCUGUG	19	12	125	3	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16801047-16801473	Cluster_1198	Pocillopora_meandrina_HIv1___Sc0000002	16801047	16801473	427	200	120	0.145	-	UGAGUCGAGGUUAUUCACAAUACGAGC	31	11	175	0	0	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16868237-16868878	Cluster_1199	Pocillopora_meandrina_HIv1___Sc0000002	16868237	16868878	642	678	268	0.0014749262536873156	-	UCCGGCUCGAAGGACCA	100	258	402	1	6	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16915483-16915906	Cluster_1200	Pocillopora_meandrina_HIv1___Sc0000002	16915483	16915906	424	99	38	0.98989898989899	+	UAAACGCUGUGCUUUCUCGUAAUUUCUUUG	16	0	95	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16938840-16939269	Cluster_1201	Pocillopora_meandrina_HIv1___Sc0000002	16938840	16939269	430	279	49	0.985663082437276	+	UGAUCAAUUUGUGAAUGUCUGCACACCACU	97	0	278	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16988101-16988565	Cluster_1202	Pocillopora_meandrina_HIv1___Sc0000002	16988101	16988565	465	343	204	0.5102040816326531	.	UUUCGAGACGUCGCGACGGU	19	158	94	66	10	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16990790-16991216	Cluster_1203	Pocillopora_meandrina_HIv1___Sc0000002	16990790	16991216	427	170	76	0.9235294117647059	+	UGAUAUAAAUUACGUCAUAUGGAAUGUAUU	44	7	153	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17295508-17295925	Cluster_1204	Pocillopora_meandrina_HIv1___Sc0000002	17295508	17295925	418	1019	11	0.0009813542688910696	-	CUUUGCUCUGAAGUGGAA	470	1019	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17411376-17411793	Cluster_1205	Pocillopora_meandrina_HIv1___Sc0000002	17411376	17411793	418	348	260	0.9942528735632183	+	UUGGAUCGUGAGUAAGACGCA	7	134	115	27	33	14	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17466039-17466456	Cluster_1206	Pocillopora_meandrina_HIv1___Sc0000002	17466039	17466456	418	773	56	0.9831824062095731	+	GAGACUUGAAGCGGUC	453	763	2	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17509524-17509939	Cluster_1207	Pocillopora_meandrina_HIv1___Sc0000002	17509524	17509939	416	157	24	0.0	-	GCCCGGCUAACUCAGUC	43	157	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17612209-17612634	Cluster_1208	Pocillopora_meandrina_HIv1___Sc0000002	17612209	17612634	426	157	58	0.9490445859872612	+	UACUUAGCACUGUGACCUGGGCUGUCAGA	20	3	144	1	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17612844-17613360	Cluster_1209	Pocillopora_meandrina_HIv1___Sc0000002	17612844	17613360	517	1098	190	0.9617486338797814	+	UGGAAUAUAGUCCAGGUCUUUCUGAU	170	27	1056	4	5	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17766802-17767230	Cluster_1210	Pocillopora_meandrina_HIv1___Sc0000002	17766802	17767230	429	124	54	0.9758064516129032	+	UCAAGAUCUUCCUCUUUGUCGUACCCGGA	58	13	108	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17800804-17801407	Cluster_1211	Pocillopora_meandrina_HIv1___Sc0000002	17800804	17801407	604	399	182	0.6015037593984962	.	CGCAUCUUUAUCCAUCACUCAAAGCGGACU	60	9	342	3	2	8	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17801599-17802229	Cluster_1212	Pocillopora_meandrina_HIv1___Sc0000002	17801599	17802229	631	473	180	0.06553911205073996	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	50	1	465	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17948195-17948609	Cluster_1213	Pocillopora_meandrina_HIv1___Sc0000002	17948195	17948609	415	104	15	0.9807692307692307	+	UAUGGACUAUGAUUU	33	102	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18030662-18031077	Cluster_1214	Pocillopora_meandrina_HIv1___Sc0000002	18030662	18031077	416	779	18	0.0012836970474967907	-	UAGGGUGCUGUCGGCU	657	778	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18043378-18043918	Cluster_1215	Pocillopora_meandrina_HIv1___Sc0000002	18043378	18043918	541	2162	264	1.0	+	GUGGUUUUAAUUCUUGUGAACAGGA	857	40	1778	33	64	84	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18048282-18048697	Cluster_1216	Pocillopora_meandrina_HIv1___Sc0000002	18048282	18048697	416	126	4	0.0	-	GACGAAUCGUGCGGCU	83	125	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18085264-18085716	Cluster_1217	Pocillopora_meandrina_HIv1___Sc0000002	18085264	18085716	453	501	110	0.9680638722554891	+	UAACUAGAUUCCACAUCAACAUU	104	38	33	58	71	274	27	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18091097-18091514	Cluster_1218	Pocillopora_meandrina_HIv1___Sc0000002	18091097	18091514	418	188	110	0.005319148936170213	-	AACGUGCUGGAGAGCU	15	114	54	1	9	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18236793-18237213	Cluster_1219	Pocillopora_meandrina_HIv1___Sc0000002	18236793	18237213	421	141	65	0.0425531914893617	-	UGUUUACUUUCUUUACAACUUCGGAUACGGG	24	1	137	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18252136-18252552	Cluster_1220	Pocillopora_meandrina_HIv1___Sc0000002	18252136	18252552	417	574	30	0.0	-	GAGACUUGAAGCGGC	242	568	5	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18758455-18759131	Cluster_1221	Pocillopora_meandrina_HIv1___Sc0000002	18758455	18759131	677	749	263	0.01335113484646195	-	UGUGAAUUUACUGACCAUCUCGACAU	39	7	719	3	5	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18981108-18982149	Cluster_1222	Pocillopora_meandrina_HIv1___Sc0000002	18981108	18982149	1042	6870	1070	0.030422125181950508	-	UGAAAACUCUUUGCGAUCUCAUUUAUGG	399	44	6578	60	61	67	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19001494-19001914	Cluster_1223	Pocillopora_meandrina_HIv1___Sc0000002	19001494	19001914	421	99	19	0.020202020202020204	-	UGGGCUGAAAUCAUACACGGG	55	15	7	68	1	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19017322-19017749	Cluster_1224	Pocillopora_meandrina_HIv1___Sc0000002	19017322	19017749	428	109	24	0.027522935779816515	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	31	1	107	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19137194-19137621	Cluster_1225	Pocillopora_meandrina_HIv1___Sc0000002	19137194	19137621	428	231	102	0.44155844155844154	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	43	16	197	7	5	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19218596-19219028	Cluster_1226	Pocillopora_meandrina_HIv1___Sc0000002	19218596	19219028	433	439	97	0.979498861047836	+	UGUUUCAACUCUUGAAUGAUUCUUGCUU	84	0	431	2	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19227899-19228326	Cluster_1227	Pocillopora_meandrina_HIv1___Sc0000002	19227899	19228326	428	142	50	0.8098591549295775	+	UUGUCUACAAGAAGCUUGACCAUUUUGU	55	4	131	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19229732-19230339	Cluster_1228	Pocillopora_meandrina_HIv1___Sc0000002	19229732	19230339	608	1590	254	0.17295597484276728	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	450	33	1519	9	7	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19355646-19356061	Cluster_1229	Pocillopora_meandrina_HIv1___Sc0000002	19355646	19356061	416	130	16	0.03076923076923077	-	GAUUUGGACGGAGCUU	60	128	0	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19433383-19433794	Cluster_1230	Pocillopora_meandrina_HIv1___Sc0000002	19433383	19433794	412	125	80	1.0	+	CUGAGGACUGGGGUGCC	8	76	31	6	7	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19435173-19435583	Cluster_1231	Pocillopora_meandrina_HIv1___Sc0000002	19435173	19435583	411	249	169	0.9116465863453815	+	GUGCGUCGUCAAGCUGUA	8	116	90	12	6	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19445465-19445883	Cluster_1232	Pocillopora_meandrina_HIv1___Sc0000002	19445465	19445883	419	248	152	0.9879032258064516	+	CAAGGCUGUGCUUUGUUGUAAUGUACU	17	68	118	15	19	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19461155-19461570	Cluster_1233	Pocillopora_meandrina_HIv1___Sc0000002	19461155	19461570	416	186	24	0.05913978494623656	-	AGGGCGAUCUGGCUG	65	175	3	4	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19537005-19537432	Cluster_1234	Pocillopora_meandrina_HIv1___Sc0000002	19537005	19537432	428	80	24	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	26	0	80	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19538138-19538717	Cluster_1235	Pocillopora_meandrina_HIv1___Sc0000002	19538138	19538717	580	3525	648	0.9997163120567376	+	UUGGAUUGUUGGAGUGAUGUGCA	329	1173	1341	129	184	489	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19565330-19565759	Cluster_1236	Pocillopora_meandrina_HIv1___Sc0000002	19565330	19565759	430	274	71	0.0	-	GAAUGGAACAAAAGUCGAGGCAGUAUGUG	75	14	248	7	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19694521-19694936	Cluster_1237	Pocillopora_meandrina_HIv1___Sc0000002	19694521	19694936	416	84	6	1.0	+	GAGUGAGCUCUUAACUA	42	84	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:96476-96895	Cluster_1238	Pocillopora_meandrina_HIv1___Sc0000003	96476	96895	420	244	14	0.012295081967213115	-	CGGUCUGCAAUUUUGGGAGC	167	204	0	39	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:128494-128904	Cluster_1239	Pocillopora_meandrina_HIv1___Sc0000003	128494	128904	411	164	118	0.9939024390243902	+	GUGGGCUGUGCCUUGGCU	8	72	46	18	11	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:174205-175182	Cluster_1240	Pocillopora_meandrina_HIv1___Sc0000003	174205	175182	978	786	290	0.06997455470737914	-	UGAUCAAGUUUCCUAUCGCCUGUAAACA	81	17	740	5	4	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:207738-208184	Cluster_1241	Pocillopora_meandrina_HIv1___Sc0000003	207738	208184	447	624	76	0.7163461538461539	.	GCACCAAUCAGAGCUGUAGAAAAACAACU	215	9	608	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:295505-296483	Cluster_1242	Pocillopora_meandrina_HIv1___Sc0000003	295505	296483	979	1487	374	0.43106926698049763	.	UAAGCCUUUGGAACAACAUCAGUGACAA	121	39	1289	18	17	38	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:313578-314400	Cluster_1243	Pocillopora_meandrina_HIv1___Sc0000003	313578	314400	823	745	327	0.6348993288590604	.	GGACAUACCAAUUCUCGCAGACGU	75	11	546	0	12	34	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:314771-315207	Cluster_1244	Pocillopora_meandrina_HIv1___Sc0000003	314771	315207	437	477	154	0.12159329140461216	-	UCGACUUGUUAAACUCUUCCAUCUGAGUAGU	47	3	452	3	4	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:448958-449506	Cluster_1245	Pocillopora_meandrina_HIv1___Sc0000003	448958	449506	549	857	519	0.9988331388564761	+	GAGCGAUGAUUAAACUAGAGAAAUGAGC	20	216	369	69	73	62	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:467253-467911	Cluster_1246	Pocillopora_meandrina_HIv1___Sc0000003	467253	467911	659	764	190	0.0013089005235602095	-	GAGCUGUGACGAAAUAUAUGU	106	263	174	160	91	32	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:469256-469663	Cluster_1247	Pocillopora_meandrina_HIv1___Sc0000003	469256	469663	408	79	47	0.0	-	GACAUCUCGGCUUCUGAGU	5	39	23	3	5	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:495066-495158	Cluster_1248	Pocillopora_meandrina_HIv1___Sc0000003	495066	495158	93	986	75	0.9989858012170385	+	UAUAUUGUACGACUCUCAUCGU	425	93	6	13	664	166	44	22	Y	spi-mir-temp-30_Stylophora_pistillata_Liew_et_al._2014_Close_match_of_nve-miR-2036.;Adi-Mir-2036_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2036-3p;_nve-miR-2036-3p;_spi-miR-temp-30;eca-nve-F-miR-2036_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;ami-nve-F-miR-2036-3p_Acropora_millepora_Praher_et_al._2021_NA;spi-nve-F-miR-2036_Stylophora_pistillata_Praher_et_al._2021_NA
Pocillopora_meandrina_HIv1___Sc0000003:788739-789165	Cluster_1249	Pocillopora_meandrina_HIv1___Sc0000003	788739	789165	427	143	59	0.027972027972027972	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	30	0	134	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:875032-875434	Cluster_1250	Pocillopora_meandrina_HIv1___Sc0000003	875032	875434	403	145	101	0.9448275862068966	+	UUCUGGGGCGCUUCA	18	75	35	9	8	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:879188-879850	Cluster_1251	Pocillopora_meandrina_HIv1___Sc0000003	879188	879850	663	1044	445	0.9961685823754789	+	UGGAUAGCAUUGCAAGGGACAAUU	78	197	471	72	92	77	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1018756-1019619	Cluster_1252	Pocillopora_meandrina_HIv1___Sc0000003	1018756	1019619	864	1521	442	0.5305719921104537	.	UCUUUGUUGGAUUCAUCGUCUUUAGCUU	142	27	1326	33	17	27	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1267920-1268335	Cluster_1253	Pocillopora_meandrina_HIv1___Sc0000003	1267920	1268335	416	145	25	0.006896551724137931	-	AAACUAGGACUAAGUG	63	141	3	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1282213-1282627	Cluster_1254	Pocillopora_meandrina_HIv1___Sc0000003	1282213	1282627	415	120	16	0.0	-	GAGUUCUACAGUCCGA	56	118	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1364281-1364948	Cluster_1255	Pocillopora_meandrina_HIv1___Sc0000003	1364281	1364948	668	3235	1242	0.9765069551777434	+	GCUUAGCGCACGGUAGAGA	190	1381	937	262	287	187	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1709656-1710200	Cluster_1256	Pocillopora_meandrina_HIv1___Sc0000003	1709656	1710200	545	603	419	0.9966832504145937	+	GUAGUUGGUUUCAGAAGU	7	168	232	40	63	51	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1751794-1752219	Cluster_1257	Pocillopora_meandrina_HIv1___Sc0000003	1751794	1752219	426	146	77	0.10273972602739725	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	18	0	121	6	2	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1752820-1753250	Cluster_1258	Pocillopora_meandrina_HIv1___Sc0000003	1752820	1753250	431	1277	138	0.02192638997650744	-	UGAAACUCUGGUCUGAAAAUAUUUGUC	581	22	1235	8	5	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1932935-1933362	Cluster_1259	Pocillopora_meandrina_HIv1___Sc0000003	1932935	1933362	428	496	50	0.8931451612903226	+	UUGGAACGUGUUGCUGAACGCUUGUUGC	328	7	481	1	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1934606-1935033	Cluster_1260	Pocillopora_meandrina_HIv1___Sc0000003	1934606	1935033	428	469	52	0.9936034115138592	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	243	4	463	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1936185-1936612	Cluster_1261	Pocillopora_meandrina_HIv1___Sc0000003	1936185	1936612	428	654	46	0.0045871559633027525	-	UGAAACUCUGAUCUGAAAAUAUUUUUA	433	1	652	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2013814-2014230	Cluster_1262	Pocillopora_meandrina_HIv1___Sc0000003	2013814	2014230	417	141	49	0.3475177304964539	.	UUUGACAACUUUUGACA	84	108	20	3	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2241887-2242315	Cluster_1263	Pocillopora_meandrina_HIv1___Sc0000003	2241887	2242315	429	186	24	0.946236559139785	+	UGGUUUGAUUGUCAGCAGUAGAUGAAAUA	142	0	185	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2476590-2477070	Cluster_1264	Pocillopora_meandrina_HIv1___Sc0000003	2476590	2477070	481	62815	857	0.0062087081111199555	-	AGGAUGGACAGUGAUUCAGAAA	26413	14535	17677	477	29795	122	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2504023-2504437	Cluster_1265	Pocillopora_meandrina_HIv1___Sc0000003	2504023	2504437	415	178	10	0.9943820224719101	+	UACUGUGAAACUGCA	112	178	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2614870-2615287	Cluster_1266	Pocillopora_meandrina_HIv1___Sc0000003	2614870	2615287	418	97	3	0.010309278350515464	-	UUGAACUCGACCCUGUCG	93	96	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2620719-2621157	Cluster_1267	Pocillopora_meandrina_HIv1___Sc0000003	2620719	2621157	439	474	157	0.9514767932489452	+	UCAGUGACUUUUGAGACUAUUGGUAAUAAU	92	10	449	1	5	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2622157-2622586	Cluster_1268	Pocillopora_meandrina_HIv1___Sc0000003	2622157	2622586	430	219	86	0.867579908675799	+	UGCUCUCGUUGUUGACUGAAGAAUCCAGCC	20	4	208	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2627197-2627614	Cluster_1269	Pocillopora_meandrina_HIv1___Sc0000003	2627197	2627614	418	105	3	1.0	+	UUGAACUCGACCCUGUCG	101	105	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2645319-2645747	Cluster_1270	Pocillopora_meandrina_HIv1___Sc0000003	2645319	2645747	429	154	58	0.9935064935064936	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	42	4	147	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2763211-2763631	Cluster_1271	Pocillopora_meandrina_HIv1___Sc0000003	2763211	2763631	421	128	34	0.0	-	UAAUUGUGAUUUUGUACUGUAGAAUAUCCA	17	48	57	6	7	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2763676-2764158	Cluster_1272	Pocillopora_meandrina_HIv1___Sc0000003	2763676	2764158	483	196451	1835	0.9998472901639595	+	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	81096	13500	181910	262	192	216	371	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2849464-2849893	Cluster_1273	Pocillopora_meandrina_HIv1___Sc0000003	2849464	2849893	430	386	158	0.010362694300518135	-	AGCUGGUGCUGGCCCAUCUAACUACAAGGU	117	48	312	5	6	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3008153-3009652	Cluster_1274	Pocillopora_meandrina_HIv1___Sc0000003	3008153	3009652	1500	13186	1442	0.12179584407705142	-	UUGGCUAGUAGCAUUCUUUCUGAUGGCU	1737	70	12296	46	125	138	511	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3012955-3013651	Cluster_1275	Pocillopora_meandrina_HIv1___Sc0000003	3012955	3013651	697	1197	466	0.21136173767752714	.	UGUUGUCCUUUGUUCAGUCUGAUUAACC	58	16	1078	11	11	35	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3014086-3014511	Cluster_1276	Pocillopora_meandrina_HIv1___Sc0000003	3014086	3014511	426	92	23	0.9782608695652174	+	GUUGACGUGAACGGUGUUAGAUGCCGAGC	34	2	85	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3014665-3015191	Cluster_1277	Pocillopora_meandrina_HIv1___Sc0000003	3014665	3015191	527	335	178	0.06567164179104477	-	UGAAUUCUUCGUAAACGGUUUCCUGGUC	27	3	322	1	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3015890-3016320	Cluster_1278	Pocillopora_meandrina_HIv1___Sc0000003	3015890	3016320	431	211	57	0.009478672985781991	-	UAUAUCUUCUUCGGACGCCCACGGCGCGCGA	68	0	209	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3033168-3033596	Cluster_1279	Pocillopora_meandrina_HIv1___Sc0000003	3033168	3033596	429	241	86	0.1037344398340249	-	UCUUUCUGGUUUUGUUUUUCGACGUAUC	35	4	219	5	3	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3033677-3034111	Cluster_1280	Pocillopora_meandrina_HIv1___Sc0000003	3033677	3034111	435	410	167	0.25121951219512195	.	UGCUUCUCAUAGUCUGUUGGGUUCUUAAC	98	5	373	4	2	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3035420-3036545	Cluster_1281	Pocillopora_meandrina_HIv1___Sc0000003	3035420	3036545	1126	4661	737	0.32224844453979834	.	UCUAGAGACAUCAUCCCUGUGUAGAAACU	699	46	3861	30	120	123	481	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3036790-3037216	Cluster_1282	Pocillopora_meandrina_HIv1___Sc0000003	3036790	3037216	427	98	33	0.04081632653061224	-	UCGAAAUUGUUGUACUGCUGGAGUCGCA	39	4	90	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3048099-3049126	Cluster_1283	Pocillopora_meandrina_HIv1___Sc0000003	3048099	3049126	1028	1813	445	0.14009928295642582	-	UCUUUCUGGUUUUGUUUUUCGACGUAUC	157	10	1704	14	7	27	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3062518-3063986	Cluster_1284	Pocillopora_meandrina_HIv1___Sc0000003	3062518	3063986	1469	2348	743	0.16567291311754684	-	UGAAGAACAGAAUAUGGGUAGUCCAUGG	143	25	2152	16	15	42	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3212023-3212452	Cluster_1285	Pocillopora_meandrina_HIv1___Sc0000003	3212023	3212452	430	188	56	0.06382978723404255	-	UCAGGCCAUGACUCUACAUCUGCUAGUAGC	36	3	171	0	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3214049-3214561	Cluster_1286	Pocillopora_meandrina_HIv1___Sc0000003	3214049	3214561	513	299	97	0.5719063545150501	.	AGAAAUACUAGCUGUUCAACUCAACAA	72	12	270	5	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3216175-3216596	Cluster_1287	Pocillopora_meandrina_HIv1___Sc0000003	3216175	3216596	422	77	21	0.0	-	UUAUUUCCUUGUAUUUCUUUAGAACUUGUA	22	2	73	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3221779-3222319	Cluster_1288	Pocillopora_meandrina_HIv1___Sc0000003	3221779	3222319	541	513	162	0.8011695906432749	+	UCGAUGUUACUGUCCGUUCUCCGUUGA	88	7	430	10	9	32	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3228849-3229280	Cluster_1289	Pocillopora_meandrina_HIv1___Sc0000003	3228849	3229280	432	789	93	0.9961977186311787	+	CUUGGAAGUGUUAUCUGCCGGUCGGCCUUU	381	16	748	5	5	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3303172-3303600	Cluster_1290	Pocillopora_meandrina_HIv1___Sc0000003	3303172	3303600	429	1745	82	0.0	-	CGAUCCAACAAGAACAAUAUGUGCUGACU	1392	1	1737	0	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3347357-3347835	Cluster_1291	Pocillopora_meandrina_HIv1___Sc0000003	3347357	3347835	479	172	75	0.4186046511627907	.	AGAUACAAAAUGGUCAAGGUUCUUGUUG	19	5	153	3	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3358566-3358981	Cluster_1292	Pocillopora_meandrina_HIv1___Sc0000003	3358566	3358981	416	263	17	0.011406844106463879	-	UUCCGAGGUCGCGCUU	218	259	3	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3438712-3439139	Cluster_1293	Pocillopora_meandrina_HIv1___Sc0000003	3438712	3439139	428	170	62	0.9529411764705882	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	44	1	165	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3439687-3440217	Cluster_1294	Pocillopora_meandrina_HIv1___Sc0000003	3439687	3440217	531	373	141	0.8310991957104558	+	UGUUGGCUGCAUUCUUUUAAAAGACGU	46	10	305	1	4	25	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3505320-3505735	Cluster_1295	Pocillopora_meandrina_HIv1___Sc0000003	3505320	3505735	416	159	13	0.9937106918238994	+	UAUAGACUUGGAAGC	62	153	6	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3758358-3758771	Cluster_1296	Pocillopora_meandrina_HIv1___Sc0000003	3758358	3758771	414	157	108	0.012738853503184714	-	UUAAGGGCUAACUCAUU	8	61	51	13	15	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3760949-3761352	Cluster_1297	Pocillopora_meandrina_HIv1___Sc0000003	3760949	3761352	404	121	79	0.0	-	CAUGCAGAUCUUUGUCAAAACCCU	7	47	35	8	6	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3898050-3898465	Cluster_1298	Pocillopora_meandrina_HIv1___Sc0000003	3898050	3898465	416	181	5	1.0	+	UGGCCUGAAAAAAAAA	155	181	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3989630-3990133	Cluster_1299	Pocillopora_meandrina_HIv1___Sc0000003	3989630	3990133	504	274	148	0.31386861313868614	.	UUGUGGUUCAAUGGGAAAACGAGAACA	19	8	196	3	6	8	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4427879-4428306	Cluster_1300	Pocillopora_meandrina_HIv1___Sc0000003	4427879	4428306	428	163	58	0.05521472392638037	-	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	56	8	146	2	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4502940-4503367	Cluster_1301	Pocillopora_meandrina_HIv1___Sc0000003	4502940	4503367	428	190	68	0.9210526315789473	+	UUAAAUGGCUUGUAAUGACUAAUAAACA	32	0	187	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4503526-4504274	Cluster_1302	Pocillopora_meandrina_HIv1___Sc0000003	4503526	4504274	749	1126	436	0.6749555950266429	.	CUACAGAAAAUACAAACCGAUUGU	41	7	1001	1	8	9	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4505511-4506569	Cluster_1303	Pocillopora_meandrina_HIv1___Sc0000003	4505511	4506569	1059	4886	1029	0.8471142038477282	+	UCCGUGUCAACAUAUUGUAUUUCAAAGU	540	24	4545	18	51	118	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4619797-4620224	Cluster_1304	Pocillopora_meandrina_HIv1___Sc0000003	4619797	4620224	428	181	70	0.03314917127071823	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	45	1	172	0	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4842828-4843448	Cluster_1305	Pocillopora_meandrina_HIv1___Sc0000003	4842828	4843448	621	498	145	0.02208835341365462	-	UGAUAAUGUUUGAAAGCUGUUGCUGUUC	117	3	487	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4945307-4945849	Cluster_1306	Pocillopora_meandrina_HIv1___Sc0000003	4945307	4945849	543	551	218	0.17422867513611615	-	UGAAAAACCUUCCACGUCAAUCUGGCUCAGA	73	7	510	4	5	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4946513-4946940	Cluster_1307	Pocillopora_meandrina_HIv1___Sc0000003	4946513	4946940	428	192	76	0.015625	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	3	180	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4969638-4970055	Cluster_1308	Pocillopora_meandrina_HIv1___Sc0000003	4969638	4970055	418	462	19	0.0021645021645021645	-	ACCGUGGUGGACUGCA	167	460	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5028952-5029429	Cluster_1309	Pocillopora_meandrina_HIv1___Sc0000003	5028952	5029429	478	851	232	0.0011750881316098707	-	AGUGAAUGAUGUAAAAUCCUGGGUUGCA	63	254	411	31	18	67	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5030876-5031354	Cluster_1310	Pocillopora_meandrina_HIv1___Sc0000003	5030876	5031354	479	1844	460	0.0	-	AGUGAAUGAUGUAAAAUUCUGGGUUGCA	121	627	849	117	68	103	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5148334-5148807	Cluster_1311	Pocillopora_meandrina_HIv1___Sc0000003	5148334	5148807	474	335	133	0.0	-	GUGGCUCGUAAUUUUGACUCAAAUAUGG	84	62	219	8	10	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5182537-5182957	Cluster_1312	Pocillopora_meandrina_HIv1___Sc0000003	5182537	5182957	421	238	177	0.9915966386554622	+	GUUGUUUACUGACUGGAUGAUAGCUGU	10	51	111	22	17	15	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5213694-5214108	Cluster_1313	Pocillopora_meandrina_HIv1___Sc0000003	5213694	5214108	415	99	25	0.12121212121212122	-	GUGUGUGCUUACUGACU	41	93	2	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5372310-5372735	Cluster_1314	Pocillopora_meandrina_HIv1___Sc0000003	5372310	5372735	426	295	125	0.8338983050847457	+	UGUGAAUCUUUUUACUCGUUAUGUUA	46	11	260	12	6	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5410933-5411346	Cluster_1315	Pocillopora_meandrina_HIv1___Sc0000003	5410933	5411346	414	90	14	1.0	+	CGGGGUGCUGUAGUGA	19	90	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5692287-5693118	Cluster_1316	Pocillopora_meandrina_HIv1___Sc0000003	5692287	5693118	832	591	251	0.949238578680203	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	53	3	570	2	1	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5694637-5695065	Cluster_1317	Pocillopora_meandrina_HIv1___Sc0000003	5694637	5695065	429	226	126	0.2743362831858407	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	10	3	210	0	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5755579-5756010	Cluster_1318	Pocillopora_meandrina_HIv1___Sc0000003	5755579	5756010	432	395	82	1.0	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	80	1	393	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5760136-5760610	Cluster_1319	Pocillopora_meandrina_HIv1___Sc0000003	5760136	5760610	475	72157	1108	0.0	-	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	29752	4443	67410	63	43	80	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5831350-5831779	Cluster_1320	Pocillopora_meandrina_HIv1___Sc0000003	5831350	5831779	430	161	26	0.9875776397515528	+	UUAUGAGUGAACCUUUCAUCGAGAAACAGG	59	3	155	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5911110-5911540	Cluster_1321	Pocillopora_meandrina_HIv1___Sc0000003	5911110	5911540	431	2450	157	0.9959183673469387	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCA	645	4	2433	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5965071-5965588	Cluster_1322	Pocillopora_meandrina_HIv1___Sc0000003	5965071	5965588	518	434	249	0.0	-	CUCCGUCUGUGGUGAGCA	22	136	190	33	29	21	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5965723-5966237	Cluster_1323	Pocillopora_meandrina_HIv1___Sc0000003	5965723	5966237	515	417	287	0.004796163069544364	-	ACAACUCGGGCGAGAUUCA	22	163	119	41	32	38	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6019953-6020383	Cluster_1324	Pocillopora_meandrina_HIv1___Sc0000003	6019953	6020383	431	313	193	0.9712460063897763	+	GAAGAUUGCGGGUUC	11	177	83	22	10	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6086863-6087280	Cluster_1325	Pocillopora_meandrina_HIv1___Sc0000003	6086863	6087280	418	1003	51	0.996011964107677	+	GAGACUUGAAGCGGC	335	1003	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6298837-6299251	Cluster_1326	Pocillopora_meandrina_HIv1___Sc0000003	6298837	6299251	415	567	8	0.9964726631393298	+	CCGCGACUGCUGCCA	553	567	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6328548-6328949	Cluster_1327	Pocillopora_meandrina_HIv1___Sc0000003	6328548	6328949	402	161	117	1.0	+	AGACGAGUGAGAGAAAAGACA	6	48	68	16	11	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6386284-6386828	Cluster_1328	Pocillopora_meandrina_HIv1___Sc0000003	6386284	6386828	545	536	340	0.0018656716417910447	-	UCUGUUGUGUCUGAAAGGCUGA	13	201	140	49	58	44	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6424799-6425229	Cluster_1329	Pocillopora_meandrina_HIv1___Sc0000003	6424799	6425229	431	567	72	1.0	+	UGACAAUCAUGCUGCUAAGUUCCUACGC	163	0	562	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6520675-6521089	Cluster_1330	Pocillopora_meandrina_HIv1___Sc0000003	6520675	6521089	415	191	24	0.9947643979057592	+	UGUCUGAGUGUCUAU	152	185	2	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6569728-6570155	Cluster_1331	Pocillopora_meandrina_HIv1___Sc0000003	6569728	6570155	428	173	72	0.017341040462427744	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	32	7	162	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6670538-6670966	Cluster_1332	Pocillopora_meandrina_HIv1___Sc0000003	6670538	6670966	429	301	55	0.9036544850498339	+	GUUUCUGUAGUGUAG	49	132	155	10	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6672454-6672886	Cluster_1333	Pocillopora_meandrina_HIv1___Sc0000003	6672454	6672886	433	971	203	0.9948506694129763	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	374	78	853	13	11	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6682716-6683131	Cluster_1334	Pocillopora_meandrina_HIv1___Sc0000003	6682716	6683131	416	197	16	1.0	+	GAGACUUGAAGCGGAU	80	191	0	2	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6742429-6742844	Cluster_1335	Pocillopora_meandrina_HIv1___Sc0000003	6742429	6742844	416	183	48	0.7650273224043715	.	AUCGGCCGUGGAUUGU	111	155	15	3	2	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6767980-6768388	Cluster_1336	Pocillopora_meandrina_HIv1___Sc0000003	6767980	6768388	409	190	147	0.005263157894736842	-	GUGACGUGUGAAUGCCAAACCGGUGAAUA	5	49	86	15	10	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6774529-6774948	Cluster_1337	Pocillopora_meandrina_HIv1___Sc0000003	6774529	6774948	420	183	119	0.00546448087431694	-	CGGAACGGAACAUGUUUGUU	14	42	70	19	14	29	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6775672-6776091	Cluster_1338	Pocillopora_meandrina_HIv1___Sc0000003	6775672	6776091	420	108	63	0.0	-	GCGGUUCAGAGAAGUAGACA	9	40	24	5	16	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6785513-6785917	Cluster_1339	Pocillopora_meandrina_HIv1___Sc0000003	6785513	6785917	405	109	54	0.01834862385321101	-	UGGGUUCUGUUGGAA	19	72	26	2	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6807042-6807456	Cluster_1340	Pocillopora_meandrina_HIv1___Sc0000003	6807042	6807456	415	109	21	0.9908256880733946	+	GGAAGUCGGCAAAAU	29	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6885700-6886302	Cluster_1341	Pocillopora_meandrina_HIv1___Sc0000003	6885700	6886302	603	750	434	0.768	.	CGGCUAUAAUGGGAAACCCUGU	29	375	107	110	88	46	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6910359-6911008	Cluster_1342	Pocillopora_meandrina_HIv1___Sc0000003	6910359	6911008	650	390	186	0.9384615384615385	+	UCUACUUCGGAGCCUAGACGU	17	175	105	61	12	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6988889-6989345	Cluster_1343	Pocillopora_meandrina_HIv1___Sc0000003	6988889	6989345	457	181	87	0.8784530386740331	+	UAUAAAGAUGUUCAUCGGCCCAGUGGCGUGA	16	3	153	1	3	1	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7061737-7062151	Cluster_1344	Pocillopora_meandrina_HIv1___Sc0000003	7061737	7062151	415	169	10	0.0	-	AUGGACUAUAAUUUU	90	169	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7133223-7133650	Cluster_1345	Pocillopora_meandrina_HIv1___Sc0000003	7133223	7133650	428	189	82	0.015873015873015872	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	38	3	176	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7244498-7244925	Cluster_1346	Pocillopora_meandrina_HIv1___Sc0000003	7244498	7244925	428	268	97	0.9552238805970149	+	UACAAACAACAGAACGUUCGAACGGCU	43	17	239	2	3	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7299311-7299720	Cluster_1347	Pocillopora_meandrina_HIv1___Sc0000003	7299311	7299720	410	189	155	0.037037037037037035	-	GAUGUGAACUUAGACUCCCUAGAU	5	52	77	15	9	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7299822-7300240	Cluster_1348	Pocillopora_meandrina_HIv1___Sc0000003	7299822	7300240	419	416	312	0.002403846153846154	-	UCAAGAUCAGUUUGCACUUGCGCU	6	129	161	44	26	19	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7300249-7300659	Cluster_1349	Pocillopora_meandrina_HIv1___Sc0000003	7300249	7300659	411	265	181	0.0037735849056603774	-	UAACGCAAGUAGAAUAGA	11	93	97	18	18	12	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7353727-7354272	Cluster_1350	Pocillopora_meandrina_HIv1___Sc0000003	7353727	7354272	546	455	291	1.0	+	UUCGGCUUCCUCAGGA	31	212	159	22	29	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7408170-7409498	Cluster_1351	Pocillopora_meandrina_HIv1___Sc0000003	7408170	7409498	1329	1981	1359	0.005047955577990914	-	GAUACUGCUAGUUUUGUUACA	15	640	778	140	149	120	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7409540-7409954	Cluster_1352	Pocillopora_meandrina_HIv1___Sc0000003	7409540	7409954	415	209	142	0.03349282296650718	-	CAUGGACUUCCAGGAAGAUU	5	86	58	16	11	16	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7410474-7410908	Cluster_1353	Pocillopora_meandrina_HIv1___Sc0000003	7410474	7410908	435	484	342	0.002066115702479339	-	CAUCUGUGUGUGUUGAGAAAAACU	10	180	172	34	37	36	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7411420-7411846	Cluster_1354	Pocillopora_meandrina_HIv1___Sc0000003	7411420	7411846	427	363	268	0.0027548209366391185	-	UUUAGAGGCUGAACUGGACGAGCCACU	8	120	140	26	24	28	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7412367-7413218	Cluster_1355	Pocillopora_meandrina_HIv1___Sc0000003	7412367	7413218	852	1108	661	0.018050541516245487	-	GACGAUCUGUGGAGGU	21	397	388	74	86	70	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7562319-7562747	Cluster_1356	Pocillopora_meandrina_HIv1___Sc0000003	7562319	7562747	429	85	14	0.03529411764705882	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	35	1	83	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7591882-7592298	Cluster_1357	Pocillopora_meandrina_HIv1___Sc0000003	7591882	7592298	417	83	12	1.0	+	CGGCCUGAAAAAAAAAA	35	81	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7599787-7601072	Cluster_1358	Pocillopora_meandrina_HIv1___Sc0000003	7599787	7601072	1286	2842	909	0.5147783251231527	.	UUGGAUCCAUUUACACUUUGUAAUCUGU	133	80	2513	53	22	37	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7622721-7623130	Cluster_1359	Pocillopora_meandrina_HIv1___Sc0000003	7622721	7623130	410	131	61	0.26717557251908397	.	UAAAUCCACCACAGUCCAUAAAUUUGUCAGA	18	0	119	1	2	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7626252-7626678	Cluster_1360	Pocillopora_meandrina_HIv1___Sc0000003	7626252	7626678	427	194	97	0.9587628865979382	+	UUUGACUGUGUUCCGCCUGUUAUUGUC	18	5	175	1	4	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7633872-7634300	Cluster_1361	Pocillopora_meandrina_HIv1___Sc0000003	7633872	7634300	429	158	63	0.9493670886075949	+	UAAGAUAUCGUUAACAACUCGAAGAAGCG	23	0	157	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7659438-7659860	Cluster_1362	Pocillopora_meandrina_HIv1___Sc0000003	7659438	7659860	423	120	42	0.975	+	AAGAUAACCAAUGAAUUCAGCUAAAAAGA	22	8	81	4	3	17	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7758160-7758574	Cluster_1363	Pocillopora_meandrina_HIv1___Sc0000003	7758160	7758574	415	102	23	0.8921568627450981	+	AUCGUGCCUGGUUGG	34	93	3	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7872076-7872492	Cluster_1364	Pocillopora_meandrina_HIv1___Sc0000003	7872076	7872492	417	406	16	0.9926108374384236	+	CGGCCUAAAAAAAAAA	148	405	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7947458-7947877	Cluster_1365	Pocillopora_meandrina_HIv1___Sc0000003	7947458	7947877	420	322	186	0.003105590062111801	-	GUUAAGGUUAAGAGCUCCA	25	148	134	10	14	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7948713-7949134	Cluster_1366	Pocillopora_meandrina_HIv1___Sc0000003	7948713	7949134	422	394	281	0.050761421319796954	-	GAAUCGGCCCUGGCU	12	106	150	34	31	33	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7955162-7955821	Cluster_1367	Pocillopora_meandrina_HIv1___Sc0000003	7955162	7955821	660	546	383	0.005494505494505495	-	GGAGGAGAUCUUGAACCUGCA	40	225	141	84	29	40	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8162818-8163232	Cluster_1368	Pocillopora_meandrina_HIv1___Sc0000003	8162818	8163232	415	272	21	0.0	-	GUGGUCGAGGCGAAG	233	272	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8175305-8175721	Cluster_1369	Pocillopora_meandrina_HIv1___Sc0000003	8175305	8175721	417	138	21	0.9927536231884058	+	GCUACUUUGACCUCAUUUA	38	136	0	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8251831-8252248	Cluster_1370	Pocillopora_meandrina_HIv1___Sc0000003	8251831	8252248	418	82	26	0.975609756097561	+	GUGGUGAUGAACUUUGAGA	13	32	25	8	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8266188-8266668	Cluster_1371	Pocillopora_meandrina_HIv1___Sc0000003	8266188	8266668	481	450	211	0.0	-	CGGCUGUUAACCGAAAGGUUGGU	22	227	63	32	36	52	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8314379-8314796	Cluster_1372	Pocillopora_meandrina_HIv1___Sc0000003	8314379	8314796	418	1188	10	0.9991582491582491	+	UUUGUAGGCUCUAACAGC	1167	1187	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8365220-8365649	Cluster_1373	Pocillopora_meandrina_HIv1___Sc0000003	8365220	8365649	430	194	82	1.0	+	UCUUGAAGCCUUAUCUGCUAGUUUACCUG	28	31	147	7	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8389909-8390326	Cluster_1374	Pocillopora_meandrina_HIv1___Sc0000003	8389909	8390326	418	165	126	1.0	+	CUCGGUGAUCUAGAAACGUAAAAA	6	51	74	8	12	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8391648-8392055	Cluster_1375	Pocillopora_meandrina_HIv1___Sc0000003	8391648	8392055	408	258	209	0.9806201550387597	+	UCUUUGAAGAUUUUCAGGAUGAAGGAUA	6	98	100	14	7	26	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8392372-8393304	Cluster_1376	Pocillopora_meandrina_HIv1___Sc0000003	8392372	8393304	933	1428	847	0.9915966386554622	+	UGAAGACUUUGCAGAAGAUUCUGUCUGUGGA	26	497	546	115	110	88	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8442393-8443320	Cluster_1377	Pocillopora_meandrina_HIv1___Sc0000003	8442393	8443320	928	6477	444	0.45098039215686275	.	UCUUGAACCAAUCUACGACAGACUGAGU	1831	47	6261	52	9	32	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8459705-8460134	Cluster_1378	Pocillopora_meandrina_HIv1___Sc0000003	8459705	8460134	430	666	160	0.9864864864864865	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	135	7	648	2	4	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8619934-8620349	Cluster_1379	Pocillopora_meandrina_HIv1___Sc0000003	8619934	8620349	416	146	85	0.5273972602739726	.	UUCCGCGUCGAUUGUGUCCAUU	16	66	3	44	26	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8622430-8623297	Cluster_1380	Pocillopora_meandrina_HIv1___Sc0000003	8622430	8623297	868	455	236	0.4	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	46	46	358	19	7	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8648200-8648636	Cluster_1381	Pocillopora_meandrina_HIv1___Sc0000003	8648200	8648636	437	434	187	0.1728110599078341	-	UGACGUUCCAGAAUCUUUGACAAAACAG	30	2	415	3	2	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8649170-8649599	Cluster_1382	Pocillopora_meandrina_HIv1___Sc0000003	8649170	8649599	430	148	47	0.013513513513513514	-	UGAAUAGCAUAACUGAUGAACUACGGG	18	0	145	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8658110-8658528	Cluster_1383	Pocillopora_meandrina_HIv1___Sc0000003	8658110	8658528	419	2708	39	1.0	+	AAUCGGCCGUGGAUUGGU	1538	2708	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8674321-8674735	Cluster_1384	Pocillopora_meandrina_HIv1___Sc0000003	8674321	8674735	415	235	25	0.851063829787234	+	CCGGCCCGGACUGAU	137	233	0	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8680824-8681250	Cluster_1385	Pocillopora_meandrina_HIv1___Sc0000003	8680824	8681250	427	207	103	0.03864734299516908	-	UAAUCGCGGUAACAGCAGAACUUCCUUGGGU	15	0	200	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8695585-8696014	Cluster_1386	Pocillopora_meandrina_HIv1___Sc0000003	8695585	8696014	430	757	63	1.0	+	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	405	2	751	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8780641-8782378	Cluster_1387	Pocillopora_meandrina_HIv1___Sc0000003	8780641	8782378	1738	2638	1059	0.9564063684609553	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	74	27	2492	13	24	41	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8905394-8905822	Cluster_1388	Pocillopora_meandrina_HIv1___Sc0000003	8905394	8905822	429	172	51	0.9825581395348837	+	UUCCUGCAUCUGUUGAGCCUUCUGACAGU	30	3	166	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8907631-8908059	Cluster_1389	Pocillopora_meandrina_HIv1___Sc0000003	8907631	8908059	429	144	57	0.9930555555555556	+	UAGGUUCUUGUGGAACAACCAGUUGUGCA	30	3	137	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8915298-8915727	Cluster_1390	Pocillopora_meandrina_HIv1___Sc0000003	8915298	8915727	430	173	65	0.930635838150289	+	CGAAUUCCAAACACCGAACCGCUUUUUGUGC	34	7	154	0	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8916615-8917176	Cluster_1391	Pocillopora_meandrina_HIv1___Sc0000003	8916615	8917176	562	314	146	0.20063694267515925	.	UAUCUAUGGCUGACUAUGUCAGUGUCUCU	23	9	281	5	5	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8920685-8921364	Cluster_1392	Pocillopora_meandrina_HIv1___Sc0000003	8920685	8921364	680	3342	461	0.8883901855176541	+	UAAGACCCAUCCAUUGCUAUCAAUUCGC	458	90	3049	34	13	32	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8969736-8970166	Cluster_1393	Pocillopora_meandrina_HIv1___Sc0000003	8969736	8970166	431	281	109	0.046263345195729534	-	UGAAGAUUCUCAAAGGUUGCUGAUAACUGGC	28	4	266	0	5	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9059675-9060089	Cluster_1394	Pocillopora_meandrina_HIv1___Sc0000003	9059675	9060089	415	76	5	0.02631578947368421	-	CCCGUGUCGGAGCCA	72	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9071829-9072246	Cluster_1395	Pocillopora_meandrina_HIv1___Sc0000003	9071829	9072246	418	352	39	0.002840909090909091	-	GACUUGAAGCGGUUGGAA	153	352	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9135605-9136019	Cluster_1396	Pocillopora_meandrina_HIv1___Sc0000003	9135605	9136019	415	150	9	0.0	-	GUGCUUGGGAUCUGA	116	149	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9149635-9150114	Cluster_1397	Pocillopora_meandrina_HIv1___Sc0000003	9149635	9150114	480	542	172	0.8782287822878229	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	51	17	308	10	8	66	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9215663-9216078	Cluster_1398	Pocillopora_meandrina_HIv1___Sc0000003	9215663	9216078	416	146	18	0.00684931506849315	-	CGUGUGCUCUUAACGG	66	145	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9291034-9292811	Cluster_1399	Pocillopora_meandrina_HIv1___Sc0000003	9291034	9292811	1778	2757	1130	0.9579252811026479	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	96	28	2609	7	32	40	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9320593-9321007	Cluster_1400	Pocillopora_meandrina_HIv1___Sc0000003	9320593	9321007	415	159	15	0.0	-	UGCUCUGAAGUGGAA	79	156	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9403760-9404178	Cluster_1401	Pocillopora_meandrina_HIv1___Sc0000003	9403760	9404178	419	3611	67	0.0005538631957906397	-	AUCGGCCGUGGAUUGGU	2120	3610	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9521091-9521511	Cluster_1402	Pocillopora_meandrina_HIv1___Sc0000003	9521091	9521511	421	92	42	0.9456521739130435	+	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	14	0	89	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9565787-9566383	Cluster_1403	Pocillopora_meandrina_HIv1___Sc0000003	9565787	9566383	597	5724	528	0.9975541579315165	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	834	15	5656	6	8	14	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9657566-9657995	Cluster_1404	Pocillopora_meandrina_HIv1___Sc0000003	9657566	9657995	430	375	107	0.9493333333333334	+	UGAGUGAGAUAAAUGAAAACCUUUGGAGA	32	0	364	0	2	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9699669-9700425	Cluster_1405	Pocillopora_meandrina_HIv1___Sc0000003	9699669	9700425	757	1489	325	0.9079919408999328	+	UGAGUGAGAUAAAUGAAAACCUUUGGAGA	82	58	1296	16	11	22	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9709233-9709736	Cluster_1406	Pocillopora_meandrina_HIv1___Sc0000003	9709233	9709736	504	3676	280	0.9910228509249184	+	UGGAACAACCUUUCGACUGACGAUCUC	765	14	3601	4	35	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9744415-9744936	Cluster_1407	Pocillopora_meandrina_HIv1___Sc0000003	9744415	9744936	522	293	154	0.34812286689419797	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	55	25	242	8	3	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9751847-9752327	Cluster_1408	Pocillopora_meandrina_HIv1___Sc0000003	9751847	9752327	481	6118	281	0.9993461915658712	+	UGUAUCGAUGUAAUCUCUCCAGUUUGUGUU	1586	58	6009	6	3	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9758869-9759872	Cluster_1409	Pocillopora_meandrina_HIv1___Sc0000003	9758869	9759872	1004	1299	308	0.0023094688221709007	-	UACAUGUCUCGGGGUAGCCGAUCUCGGA	252	24	1261	2	0	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9762294-9762709	Cluster_1410	Pocillopora_meandrina_HIv1___Sc0000003	9762294	9762709	416	109	55	0.7431192660550459	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	13	1	92	0	2	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9768332-9768755	Cluster_1411	Pocillopora_meandrina_HIv1___Sc0000003	9768332	9768755	424	127	55	0.023622047244094488	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	44	1	124	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9777960-9778366	Cluster_1412	Pocillopora_meandrina_HIv1___Sc0000003	9777960	9778366	407	91	47	0.13186813186813187	-	GUACACAAUAUUGGCCAAGAUUCUGAAA	13	6	73	3	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9784035-9784461	Cluster_1413	Pocillopora_meandrina_HIv1___Sc0000003	9784035	9784461	427	85	26	0.9294117647058824	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	45	0	83	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9784980-9785407	Cluster_1414	Pocillopora_meandrina_HIv1___Sc0000003	9784980	9785407	428	95	24	0.9789473684210527	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	31	2	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9795699-9796507	Cluster_1415	Pocillopora_meandrina_HIv1___Sc0000003	9795699	9796507	809	14615	893	0.0013684570646595963	-	UCGAAGACUCUAGACGGCGGAAGCCUCUUU	2297	67	14437	22	20	24	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9799382-9799799	Cluster_1416	Pocillopora_meandrina_HIv1___Sc0000003	9799382	9799799	418	123	65	0.9512195121951219	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	14	0	115	0	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9800898-9801298	Cluster_1417	Pocillopora_meandrina_HIv1___Sc0000003	9800898	9801298	401	117	69	0.8205128205128205	+	UGUAUUGAUUGAACUUGUCGGUUGACC	9	2	98	4	0	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9807539-9807963	Cluster_1418	Pocillopora_meandrina_HIv1___Sc0000003	9807539	9807963	425	111	50	0.0	-	UUGUGCUGUUCUGUUUCUGCCAAUAGC	20	2	106	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9810528-9811421	Cluster_1419	Pocillopora_meandrina_HIv1___Sc0000003	9810528	9811421	894	53063	1338	0.00013191866272167048	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	14696	37	52880	13	29	22	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9829639-9830066	Cluster_1420	Pocillopora_meandrina_HIv1___Sc0000003	9829639	9830066	428	158	53	0.0189873417721519	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	52	4	153	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9840509-9840938	Cluster_1421	Pocillopora_meandrina_HIv1___Sc0000003	9840509	9840938	430	123	28	0.983739837398374	+	UGUGUACUUUUGGUAGGUGGUAAUCAAAGU	77	0	120	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9842982-9843408	Cluster_1422	Pocillopora_meandrina_HIv1___Sc0000003	9842982	9843408	427	103	35	0.019417475728155338	-	UUGGAAUUCGAAGCAAGUAACAACCGACA	15	0	102	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9846538-9846953	Cluster_1423	Pocillopora_meandrina_HIv1___Sc0000003	9846538	9846953	416	208	59	0.9807692307692307	+	UGUAUCCCAACCAAGU	128	130	71	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9872204-9872999	Cluster_1424	Pocillopora_meandrina_HIv1___Sc0000003	9872204	9872999	796	1864	366	0.002145922746781116	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	337	6	1852	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9891466-9891893	Cluster_1425	Pocillopora_meandrina_HIv1___Sc0000003	9891466	9891893	428	136	51	0.029411764705882353	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	46	2	134	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9902335-9902764	Cluster_1426	Pocillopora_meandrina_HIv1___Sc0000003	9902335	9902764	430	136	34	0.9338235294117647	+	UGUGUACUUUUGGUAGGUGGUAAUCAAAGU	80	0	135	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9904807-9905235	Cluster_1427	Pocillopora_meandrina_HIv1___Sc0000003	9904807	9905235	429	121	42	0.0	-	UUGGAAUUCGAAGCAAGUAACAACCGACA	23	0	118	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9912134-9912555	Cluster_1428	Pocillopora_meandrina_HIv1___Sc0000003	9912134	9912555	422	79	25	0.9746835443037974	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	46	0	77	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9920702-9921127	Cluster_1429	Pocillopora_meandrina_HIv1___Sc0000003	9920702	9921127	426	114	25	0.05263157894736842	-	CGCUACAACAAGAUGUGAGUACUGUG	35	1	110	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9932440-9933416	Cluster_1430	Pocillopora_meandrina_HIv1___Sc0000003	9932440	9933416	977	2959	444	0.0003379520108144643	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	578	3	2951	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9935605-9936183	Cluster_1431	Pocillopora_meandrina_HIv1___Sc0000003	9935605	9936183	579	698	287	0.7163323782234957	.	UGGAAAGUUGUAAAAUUAAGGCUGUACGG	32	7	625	4	4	15	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9944352-9944779	Cluster_1432	Pocillopora_meandrina_HIv1___Sc0000003	9944352	9944779	428	137	45	0.021897810218978103	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	38	2	134	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9987992-9988420	Cluster_1433	Pocillopora_meandrina_HIv1___Sc0000003	9987992	9988420	429	312	54	0.8878205128205128	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	128	5	297	5	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9994430-9994856	Cluster_1434	Pocillopora_meandrina_HIv1___Sc0000003	9994430	9994856	427	89	30	0.9101123595505618	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	48	0	84	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10001373-10002717	Cluster_1435	Pocillopora_meandrina_HIv1___Sc0000003	10001373	10002717	1345	37847	2271	0.0007662430311517425	-	UGAGCGUACGGUUUAAUGUGUUGAUGACGU	4257	162	37322	44	125	88	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10010816-10011245	Cluster_1436	Pocillopora_meandrina_HIv1___Sc0000003	10010816	10011245	430	935	164	0.0	-	UACAUGUCUCGGGGUAGCCGAUCUCGGA	260	12	917	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10011390-10011898	Cluster_1437	Pocillopora_meandrina_HIv1___Sc0000003	10011390	10011898	509	7485	535	0.0005344021376085504	-	UGUAUCGAUGUAAUCUCUCCAGUUUGUGUU	1543	66	7348	6	8	13	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10012444-10012874	Cluster_1438	Pocillopora_meandrina_HIv1___Sc0000003	10012444	10012874	431	276	87	0.018115942028985508	-	UUUAUCGUCAUUUGUGCUGAAAAUGGACA	34	6	268	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10014241-10014659	Cluster_1439	Pocillopora_meandrina_HIv1___Sc0000003	10014241	10014659	419	124	60	0.7741935483870968	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	13	1	107	2	3	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10064345-10065144	Cluster_1440	Pocillopora_meandrina_HIv1___Sc0000003	10064345	10065144	800	2386	275	0.9459346186085499	+	UCGAAGACUCUAGACGGCGGAAGCCUCUUC	788	31	2287	10	6	13	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10079764-10080571	Cluster_1441	Pocillopora_meandrina_HIv1___Sc0000003	10079764	10080571	808	39901	624	0.9980702238039146	+	UGGAACAACCUUUCGACUGACGAUCUCACC	17034	64	39695	20	50	33	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10095244-10095670	Cluster_1442	Pocillopora_meandrina_HIv1___Sc0000003	10095244	10095670	427	119	53	0.1092436974789916	-	UGAGUGAGAUAAAUGAAUACCUUUGGAGA	12	2	114	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10129512-10129606	Cluster_1443	Pocillopora_meandrina_HIv1___Sc0000003	10129512	10129606	95	11154	258	0.00017930787161556393	-	CGAUGUACUUCAGAGCAAUUUUU	2791	469	115	3694	247	4906	1723	23	Y	spi-mir-temp-23_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000003:10217874-10218300	Cluster_1444	Pocillopora_meandrina_HIv1___Sc0000003	10217874	10218300	427	134	73	0.022388059701492536	-	UGCUCAUAUCUAAUAGAACUACUGCCGUU	14	1	127	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10254534-10255238	Cluster_1445	Pocillopora_meandrina_HIv1___Sc0000003	10254534	10255238	705	639	339	0.6588419405320813	.	UCUAACGGAUACAGCUGCUGUACUGCU	24	33	522	8	14	25	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10257232-10258201	Cluster_1446	Pocillopora_meandrina_HIv1___Sc0000003	10257232	10258201	970	3112	660	0.24293059125964012	.	CGUGUACGACGCCUCUGCCCGAGCUUCAGA	875	31	2967	28	17	28	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10258826-10259437	Cluster_1447	Pocillopora_meandrina_HIv1___Sc0000003	10258826	10259437	612	413	201	0.5181598062953995	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	57	5	381	2	4	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10343590-10344134	Cluster_1448	Pocillopora_meandrina_HIv1___Sc0000003	10343590	10344134	545	471	103	0.9957537154989384	+	GCUUUGCAUGGAACAAUG	169	310	135	7	11	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10366033-10366130	Cluster_1449	Pocillopora_meandrina_HIv1___Sc0000003	10366033	10366130	98	846352	738	0.9999113843885287	+	ACCCGUAGAUCCGAACUUGU	295310	449529	33	21348	371685	3560	197	N	Y	spi-mir-temp-1_Stylophora_pistillata_Liew_et_al._2014_Matches_miR-100_family.;apa-mir-100_Exaiptasia_pallida_Baumgarten_et_al._2017_miR-100;_Nve;_Spis;_Adi;eca-nve-F-miR-100_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;mse-nve-F-miR-100_Metridium_senile_Praher_et_al._2021_Transcriptome-level;sca-nve-F-miR-100_Scolanthus_callimorphus_Praher_et_al._2021_Transcriptome-level;epa-nve-F-miR-100_Exaiptasia_pallida_Praher_et_al._2021_NA;spi-nve-F-miR-100_Stylophora_pistillata_Praher_et_al._2021_NA;miR-100_Nematostella_vectensis_Moran_et_al._2014_NA;avi-miR-temp-100_Anemonia_viridis_Urbarova_et_al._2018_NA
Pocillopora_meandrina_HIv1___Sc0000003:10467440-10467869	Cluster_1450	Pocillopora_meandrina_HIv1___Sc0000003	10467440	10467869	430	146	34	0.07534246575342465	-	UUACAACGGGGACUAGCUCCGAUCUCUCUU	21	10	136	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10524991-10525416	Cluster_1451	Pocillopora_meandrina_HIv1___Sc0000003	10524991	10525416	426	89	32	0.02247191011235955	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	0	89	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10659509-10659936	Cluster_1452	Pocillopora_meandrina_HIv1___Sc0000003	10659509	10659936	428	181	76	0.9116022099447514	+	UAUCAACAUUCUUAAUGUCACAUGGCACUC	20	2	168	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10771888-10772321	Cluster_1453	Pocillopora_meandrina_HIv1___Sc0000003	10771888	10772321	434	436	172	0.8577981651376146	+	UAUCACUUCAUAUUCGGAUAUCCAUUGC	40	16	376	1	5	10	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10853901-10854328	Cluster_1454	Pocillopora_meandrina_HIv1___Sc0000003	10853901	10854328	428	223	98	0.39461883408071746	.	AAGUUUUCCAACGACUCGUUUCUCUGCG	42	7	203	4	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10886095-10886509	Cluster_1455	Pocillopora_meandrina_HIv1___Sc0000003	10886095	10886509	415	120	22	0.9666666666666667	+	AGUGUGCUCUUAAAU	54	119	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10898403-10898826	Cluster_1456	Pocillopora_meandrina_HIv1___Sc0000003	10898403	10898826	424	95	27	1.0	+	UGAGAUGGAUUUGAAUGACUGUAAGGUUUAC	19	4	74	2	8	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10984914-10985340	Cluster_1457	Pocillopora_meandrina_HIv1___Sc0000003	10984914	10985340	427	175	95	0.10285714285714286	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	23	3	162	0	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11272564-11273266	Cluster_1458	Pocillopora_meandrina_HIv1___Sc0000003	11272564	11273266	703	457	201	0.9912472647702407	+	UAGGCACUCUUCUGUUUCCAGGUUUGGUA	55	13	427	6	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11273554-11274020	Cluster_1459	Pocillopora_meandrina_HIv1___Sc0000003	11273554	11274020	467	446	160	0.9887892376681614	+	UGCGACUCCGAGCACUUUCUGCACAAGUU	63	11	422	0	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11275061-11275491	Cluster_1460	Pocillopora_meandrina_HIv1___Sc0000003	11275061	11275491	431	2617	203	0.9969430645777608	+	UCGUAGACUUCCGUCCUUAUUGUUUGGUA	1114	10	2560	2	13	8	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11276324-11276785	Cluster_1461	Pocillopora_meandrina_HIv1___Sc0000003	11276324	11276785	462	429	109	1.0	+	UGUACAUUGAAGCGCAGUUGUUUGUAGAACA	75	7	415	3	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11282947-11283364	Cluster_1462	Pocillopora_meandrina_HIv1___Sc0000003	11282947	11283364	418	241	33	1.0	+	AUCCCACUCCUGACACCG	103	232	8	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11284634-11285047	Cluster_1463	Pocillopora_meandrina_HIv1___Sc0000003	11284634	11285047	414	104	43	0.9903846153846154	+	UUGGUAGACACUGCACAGUGGAUCUGGC	36	3	96	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11288132-11288614	Cluster_1464	Pocillopora_meandrina_HIv1___Sc0000003	11288132	11288614	483	554	188	1.0	+	UAAACAUCUUCUGUCUGAUAGCAAACGGC	61	12	539	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11289719-11290158	Cluster_1465	Pocillopora_meandrina_HIv1___Sc0000003	11289719	11290158	440	243	41	0.4156378600823045	.	UACCGUAGAACUUUCCAGAACAUUUCAUU	101	0	228	0	0	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11295745-11296301	Cluster_1466	Pocillopora_meandrina_HIv1___Sc0000003	11295745	11296301	557	3087	515	0.94881762228701	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	561	24	2880	7	68	58	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11296950-11298687	Cluster_1467	Pocillopora_meandrina_HIv1___Sc0000003	11296950	11298687	1738	3769	1356	0.9514460068983815	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	101	27	3569	9	30	55	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11304922-11305468	Cluster_1468	Pocillopora_meandrina_HIv1___Sc0000003	11304922	11305468	547	5827	487	0.9521194439677364	+	UGAAAUCUUCUUGCUCUUUGUAAUCUGA	2822	118	5509	37	26	75	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11310298-11312559	Cluster_1469	Pocillopora_meandrina_HIv1___Sc0000003	11310298	11312559	2262	6714	2132	0.9064641048555258	+	UAUGUACGAUUUUAACUGGAAGAAACGUU	195	153	6239	21	52	88	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11313832-11314259	Cluster_1470	Pocillopora_meandrina_HIv1___Sc0000003	11313832	11314259	428	114	33	0.8859649122807017	+	UGAAAUUCCGAAUAAGUUCUCCAAAACC	38	7	100	0	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11321068-11322166	Cluster_1471	Pocillopora_meandrina_HIv1___Sc0000003	11321068	11322166	1099	5802	751	0.9682867976559807	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1466	34	5591	16	35	74	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11335082-11335508	Cluster_1472	Pocillopora_meandrina_HIv1___Sc0000003	11335082	11335508	427	249	125	0.8433734939759037	+	UGAUUCAUCAGUAUUAAUGACUGUAGU	52	8	220	3	1	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11335681-11336085	Cluster_1473	Pocillopora_meandrina_HIv1___Sc0000003	11335681	11336085	405	319	196	0.6394984326018809	.	UGACUAAACUGUGCUCGUGGAAUGUAUG	19	4	281	4	8	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11337090-11337595	Cluster_1474	Pocillopora_meandrina_HIv1___Sc0000003	11337090	11337595	506	434	205	0.6820276497695853	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	78	9	378	5	1	13	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11345275-11345703	Cluster_1475	Pocillopora_meandrina_HIv1___Sc0000003	11345275	11345703	429	230	56	0.991304347826087	+	UACUAAGGAUCUUGAUCUCUUGUUUGAAG	77	3	223	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11346922-11347354	Cluster_1476	Pocillopora_meandrina_HIv1___Sc0000003	11346922	11347354	433	2369	180	0.9995778809624314	+	UGAAAGACUCCUACAAAACUCCUUUUUGC	790	23	2316	0	8	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11353870-11354297	Cluster_1477	Pocillopora_meandrina_HIv1___Sc0000003	11353870	11354297	428	206	98	1.0	+	UGAUCAUGUCGUUGCUGAAUUGAGGGCAU	24	1	204	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11358732-11359162	Cluster_1478	Pocillopora_meandrina_HIv1___Sc0000003	11358732	11359162	431	224	77	0.9910714285714286	+	UGACCGACUUCAUAAAGACUGACCAAGAGGA	30	8	207	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11363153-11363582	Cluster_1479	Pocillopora_meandrina_HIv1___Sc0000003	11363153	11363582	430	507	161	0.9723865877712031	+	UAUGAGCAAUAUCCCGAUGAGAAAUUUCG	68	28	440	3	9	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11363737-11364794	Cluster_1480	Pocillopora_meandrina_HIv1___Sc0000003	11363737	11364794	1058	15680	1258	0.998405612244898	+	UAUAGCAGAAAAUGAUGAACCAUAAA	1681	309	14860	79	91	169	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11365014-11366394	Cluster_1481	Pocillopora_meandrina_HIv1___Sc0000003	11365014	11366394	1381	3695	705	0.993234100135318	+	UGCAGACUUUGCUUAGGGGUUCAACAUC	935	64	3447	7	60	93	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11378928-11380102	Cluster_1482	Pocillopora_meandrina_HIv1___Sc0000003	11378928	11380102	1175	886	364	0.9367945823927766	+	UAAGUGCGCUCUCAUGUAGAUAUAUGGG	91	15	804	2	13	16	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11380313-11380818	Cluster_1483	Pocillopora_meandrina_HIv1___Sc0000003	11380313	11380818	506	685	276	0.9124087591240876	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	58	8	651	2	2	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11380835-11381362	Cluster_1484	Pocillopora_meandrina_HIv1___Sc0000003	11380835	11381362	528	551	217	0.8874773139745916	+	UGAACUUCUCGGCUCCAAACACUAUGG	121	4	506	4	4	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11381379-11381806	Cluster_1485	Pocillopora_meandrina_HIv1___Sc0000003	11381379	11381806	428	329	157	0.8601823708206687	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	58	2	308	0	1	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11381813-11382239	Cluster_1486	Pocillopora_meandrina_HIv1___Sc0000003	11381813	11382239	427	251	131	0.9402390438247012	+	UGAUAACACCAAGUUCUUCGAGACGAGU	30	6	236	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11386437-11386980	Cluster_1487	Pocillopora_meandrina_HIv1___Sc0000003	11386437	11386980	544	421	178	0.9144893111638955	+	UGUAUCUUCUUAGGCCAGCAUGUGUACUGA	53	4	404	0	1	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11387132-11387560	Cluster_1488	Pocillopora_meandrina_HIv1___Sc0000003	11387132	11387560	429	208	84	0.9711538461538461	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	36	2	204	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11387865-11388471	Cluster_1489	Pocillopora_meandrina_HIv1___Sc0000003	11387865	11388471	607	1186	363	0.9443507588532883	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	148	16	1113	7	5	20	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11402239-11402660	Cluster_1490	Pocillopora_meandrina_HIv1___Sc0000003	11402239	11402660	422	247	143	0.902834008097166	+	UAAUUUGCACUCUUCAUAGAUCCCUAAA	20	6	227	3	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11403222-11403650	Cluster_1491	Pocillopora_meandrina_HIv1___Sc0000003	11403222	11403650	429	179	63	0.9776536312849162	+	UGUGUGGAUCUGUAAUGCAUCAUGCCGUC	42	7	171	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11404422-11404953	Cluster_1492	Pocillopora_meandrina_HIv1___Sc0000003	11404422	11404953	532	2041	405	0.6016658500734934	.	GUGUAGAUCAGCCGACUUCAACAUGUCA	180	41	1662	13	48	124	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11405600-11406230	Cluster_1493	Pocillopora_meandrina_HIv1___Sc0000003	11405600	11406230	631	480	167	0.9770833333333333	+	UACUGAAUUUCUCGCACGCAAAUUGUGGG	112	8	459	1	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11406949-11408132	Cluster_1494	Pocillopora_meandrina_HIv1___Sc0000003	11406949	11408132	1184	1291	453	0.9140201394268009	+	AAUGCGGGUUCUGCA	348	407	819	5	14	25	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11415939-11417910	Cluster_1495	Pocillopora_meandrina_HIv1___Sc0000003	11415939	11417910	1972	5774	1547	0.9385174922064426	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	492	40	5531	6	23	56	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11418569-11418975	Cluster_1496	Pocillopora_meandrina_HIv1___Sc0000003	11418569	11418975	407	315	131	0.9650793650793651	+	UAUUAUACUGCGGGUUACUCAGCCAAGC	24	0	295	4	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11419094-11419827	Cluster_1497	Pocillopora_meandrina_HIv1___Sc0000003	11419094	11419827	734	1113	302	0.9407008086253369	+	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	124	18	1045	2	9	15	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11419882-11420308	Cluster_1498	Pocillopora_meandrina_HIv1___Sc0000003	11419882	11420308	427	155	69	0.9806451612903225	+	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	32	5	145	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11420788-11422512	Cluster_1499	Pocillopora_meandrina_HIv1___Sc0000003	11420788	11422512	1725	2159	772	0.6924502084298286	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	102	37	1962	5	7	47	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11422534-11423478	Cluster_1500	Pocillopora_meandrina_HIv1___Sc0000003	11422534	11423478	945	2240	760	0.09508928571428571	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	173	21	2084	11	5	43	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11423483-11424351	Cluster_1501	Pocillopora_meandrina_HIv1___Sc0000003	11423483	11424351	869	1087	538	0.1343146274149034	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	28	33	954	1	16	30	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11424552-11426547	Cluster_1502	Pocillopora_meandrina_HIv1___Sc0000003	11424552	11426547	1996	3426	1180	0.0645067133683596	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	224	38	3151	18	18	66	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11428422-11428852	Cluster_1503	Pocillopora_meandrina_HIv1___Sc0000003	11428422	11428852	431	894	96	0.9854586129753915	+	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	514	6	868	0	3	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11430182-11430731	Cluster_1504	Pocillopora_meandrina_HIv1___Sc0000003	11430182	11430731	550	4158	593	0.4093314093314093	.	ACAAGACAGAAUUCCAGCUGAUACAGA	468	51	3844	8	34	90	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11430802-11431829	Cluster_1505	Pocillopora_meandrina_HIv1___Sc0000003	11430802	11431829	1028	4229	938	0.10593520926933081	-	UCUGCGACUAUGAAAUAAGGCUUCUGC	442	59	3945	14	25	65	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11432031-11432913	Cluster_1506	Pocillopora_meandrina_HIv1___Sc0000003	11432031	11432913	883	4517	755	0.15076378127075493	-	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	580	23	4289	36	10	62	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11433933-11435134	Cluster_1507	Pocillopora_meandrina_HIv1___Sc0000003	11433933	11435134	1202	2666	866	0.16616654163540887	-	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	119	37	2450	11	26	37	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11436258-11436994	Cluster_1508	Pocillopora_meandrina_HIv1___Sc0000003	11436258	11436994	737	3823	552	0.01569448077426105	-	UGGAAAAGGCUUGUUGGAAAUCUUCACG	761	9	3753	5	4	14	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11535301-11535725	Cluster_1509	Pocillopora_meandrina_HIv1___Sc0000003	11535301	11535725	425	92	25	1.0	+	GAGAUUCUCAAGAGGAUUGCACUGGAGA	33	5	84	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11639373-11639839	Cluster_1510	Pocillopora_meandrina_HIv1___Sc0000003	11639373	11639839	467	1162	180	0.49311531841652323	.	UUAACUCCACGGUGCCAAUGACUUUCUU	187	10	977	8	10	76	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11689765-11690191	Cluster_1511	Pocillopora_meandrina_HIv1___Sc0000003	11689765	11690191	427	131	36	0.9923664122137404	+	UUAUAACCGAGUGUGCCUUAUAACCGA	49	3	126	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11710129-11710557	Cluster_1512	Pocillopora_meandrina_HIv1___Sc0000003	11710129	11710557	429	526	65	0.9752851711026616	+	UAACUUCAACUAGAUCAAAAUGCUCGUGA	323	8	511	2	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11727877-11728296	Cluster_1513	Pocillopora_meandrina_HIv1___Sc0000003	11727877	11728296	420	245	17	0.0	-	CACUUGAAGCGGUUGGAU	72	245	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11894004-11894428	Cluster_1514	Pocillopora_meandrina_HIv1___Sc0000003	11894004	11894428	425	158	56	0.5	.	UCUGACAUCCUUCUUUUAUACUUUGUGC	21	4	99	0	9	15	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12068300-12068733	Cluster_1515	Pocillopora_meandrina_HIv1___Sc0000003	12068300	12068733	434	355	122	0.923943661971831	+	UAGACAAGAUCUUCAGUAAAAACCAAUUCU	38	34	302	6	5	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12280391-12280819	Cluster_1516	Pocillopora_meandrina_HIv1___Sc0000003	12280391	12280819	429	391	60	0.9820971867007673	+	GCUUGAUGUACGCGAAAGAAAUUGGAUGG	58	12	373	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12328977-12329392	Cluster_1517	Pocillopora_meandrina_HIv1___Sc0000003	12328977	12329392	416	116	67	0.9913793103448276	+	AACAGGUCGAAGGGUAGAGACA	20	42	24	6	27	15	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12332383-12332960	Cluster_1518	Pocillopora_meandrina_HIv1___Sc0000003	12332383	12332960	578	514	46	0.632295719844358	.	GCAUUACCUGAUCUUUUGUACCUUAGGCU	130	6	504	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12356919-12357347	Cluster_1519	Pocillopora_meandrina_HIv1___Sc0000003	12356919	12357347	429	259	108	0.1776061776061776	-	GUUCUUAUCAGCAGGAAUACCUCUGUCCA	51	12	220	1	1	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12463515-12464185	Cluster_1520	Pocillopora_meandrina_HIv1___Sc0000003	12463515	12464185	671	1631	282	0.5107296137339056	.	CGCUACUUUGACCUCAUU	145	740	860	6	5	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12466781-12467410	Cluster_1521	Pocillopora_meandrina_HIv1___Sc0000003	12466781	12467410	630	369	84	0.967479674796748	+	UUUCAAACUAAGGAAGGAGAAAGGGAUA	129	3	281	5	4	9	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12564107-12564536	Cluster_1522	Pocillopora_meandrina_HIv1___Sc0000003	12564107	12564536	430	290	120	0.006896551724137931	-	UCUCAGUGACUUGAGUUCUUCUUGUACGGA	23	4	279	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12565211-12565746	Cluster_1523	Pocillopora_meandrina_HIv1___Sc0000003	12565211	12565746	536	382	153	0.005235602094240838	-	UGUGUAACUGCUGCUGGCGUCCAAGCCGU	23	2	368	5	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12586092-12586513	Cluster_1524	Pocillopora_meandrina_HIv1___Sc0000003	12586092	12586513	422	253	132	0.05138339920948617	-	UGAUGUUUGGUCUGAUGCAGGUGAUUAC	16	21	219	1	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12639739-12640148	Cluster_1525	Pocillopora_meandrina_HIv1___Sc0000003	12639739	12640148	410	103	47	0.6796116504854369	.	UUUUGUAUCUGGAUUCCUUGACAUCU	14	14	83	3	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12711305-12711721	Cluster_1526	Pocillopora_meandrina_HIv1___Sc0000003	12711305	12711721	417	14040	57	0.0	-	AGUGUGCUCUUAACA	10824	14035	1	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12928765-12930446	Cluster_1527	Pocillopora_meandrina_HIv1___Sc0000003	12928765	12930446	1682	2097	845	0.19027181688125894	-	UCUAACGCGUUUGUCUGACAUCCCUUU	134	40	1876	13	40	33	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12931370-12932841	Cluster_1528	Pocillopora_meandrina_HIv1___Sc0000003	12931370	12932841	1472	16792	2328	0.9022153406383993	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3129	294	14918	164	81	187	1148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13055954-13056371	Cluster_1529	Pocillopora_meandrina_HIv1___Sc0000003	13055954	13056371	418	195	79	0.005128205128205128	-	GAGAGAGCUCAGAUGUGU	52	145	22	10	5	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13330512-13331270	Cluster_1530	Pocillopora_meandrina_HIv1___Sc0000003	13330512	13331270	759	316	135	0.9113924050632911	+	UAGACAUGACAUCAGCCUCUGAGCCAACUC	25	5	294	3	5	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13331910-13332597	Cluster_1531	Pocillopora_meandrina_HIv1___Sc0000003	13331910	13332597	688	3654	465	0.023809523809523808	-	UGUAAUCCACAUGAUCAGUCCAAGACAGAUU	359	167	3385	4	11	13	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13396302-13397580	Cluster_1532	Pocillopora_meandrina_HIv1___Sc0000003	13396302	13397580	1279	2832	1027	0.1931497175141243	-	UAGAAGGAUUUGAAAAUGUCAGGCAUGU	187	40	2631	13	16	31	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13398147-13398573	Cluster_1533	Pocillopora_meandrina_HIv1___Sc0000003	13398147	13398573	427	158	87	0.9240506329113924	+	UACUUGACUCUAGGAUACACAAGUUCUGG	29	1	153	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13398708-13399926	Cluster_1534	Pocillopora_meandrina_HIv1___Sc0000003	13398708	13399926	1219	3175	1059	0.6818897637795276	.	AGGUGUAGAAUGUAAAAAGCAGCU	152	34	2712	23	33	75	298	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13490963-13491385	Cluster_1535	Pocillopora_meandrina_HIv1___Sc0000003	13490963	13491385	423	110	31	0.9090909090909091	+	UGUAUCUUCAGAGGACUUCAGGUCGCUCA	42	3	93	4	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13511110-13511525	Cluster_1536	Pocillopora_meandrina_HIv1___Sc0000003	13511110	13511525	416	102	39	0.9803921568627451	+	UUUCUUCAGAUUCGAAAAGCUUUCUUC	36	1	98	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13577508-13578577	Cluster_1537	Pocillopora_meandrina_HIv1___Sc0000003	13577508	13578577	1070	1426	534	0.8302945301542777	+	UAACAGAUAAAUUAUGCGUAGAGCACUUCC	35	43	1301	6	10	10	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13610033-13610462	Cluster_1538	Pocillopora_meandrina_HIv1___Sc0000003	13610033	13610462	430	146	36	0.8698630136986302	+	AUCUAAACGAACUUGUUUUUCUUAUGAACA	38	6	135	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13659589-13660016	Cluster_1539	Pocillopora_meandrina_HIv1___Sc0000003	13659589	13660016	428	160	57	0.98125	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	49	0	154	0	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13680821-13681239	Cluster_1540	Pocillopora_meandrina_HIv1___Sc0000003	13680821	13681239	419	215	152	0.37209302325581395	.	UUUGUGCGGACCUUUGUGAG	11	128	21	49	9	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13841495-13841922	Cluster_1541	Pocillopora_meandrina_HIv1___Sc0000003	13841495	13841922	428	90	20	0.044444444444444446	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	0	90	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13864481-13864909	Cluster_1542	Pocillopora_meandrina_HIv1___Sc0000003	13864481	13864909	429	146	57	0.9246575342465754	+	UAGGAUAUAUCACUUGCGUAAUUUACAAC	18	3	136	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13891543-13891952	Cluster_1543	Pocillopora_meandrina_HIv1___Sc0000003	13891543	13891952	410	137	51	0.583941605839416	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	20	2	129	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13907614-13908040	Cluster_1544	Pocillopora_meandrina_HIv1___Sc0000003	13907614	13908040	427	154	47	0.05194805194805195	-	UCGUUUAGAUCAGAGAUCACCUCAACU	39	3	148	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13952701-13953794	Cluster_1545	Pocillopora_meandrina_HIv1___Sc0000003	13952701	13953794	1094	1214	466	0.9785831960461285	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	89	9	1165	2	6	12	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13953829-13954231	Cluster_1546	Pocillopora_meandrina_HIv1___Sc0000003	13953829	13954231	403	159	90	0.9559748427672956	+	UGGGAAUCCGAAUCGUGGUACAAAGUCA	20	5	140	2	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13954671-13955203	Cluster_1547	Pocillopora_meandrina_HIv1___Sc0000003	13954671	13955203	533	582	224	0.9226804123711341	+	UGUUAAAAUUAAAAUCUGCCAGUUCUGC	132	14	519	5	3	11	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13955885-13956926	Cluster_1548	Pocillopora_meandrina_HIv1___Sc0000003	13955885	13956926	1042	873	378	0.9782359679266895	+	UAACAUCUCUCUUUCCGACUUUAACAGC	54	14	826	4	6	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13957064-13958660	Cluster_1549	Pocillopora_meandrina_HIv1___Sc0000003	13957064	13958660	1597	1585	757	0.8700315457413249	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	86	18	1441	12	12	19	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13990012-13990430	Cluster_1550	Pocillopora_meandrina_HIv1___Sc0000003	13990012	13990430	419	85	34	0.9647058823529412	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	30	6	73	2	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14079943-14080455	Cluster_1551	Pocillopora_meandrina_HIv1___Sc0000003	14079943	14080455	513	878	384	0.0489749430523918	-	UCCGUUUCGAGGUAUUUAUUUAGAGCUC	26	23	806	3	5	11	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14080569-14081562	Cluster_1552	Pocillopora_meandrina_HIv1___Sc0000003	14080569	14081562	994	1119	466	0.07327971403038427	-	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	94	26	1026	9	6	11	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14081700-14082741	Cluster_1553	Pocillopora_meandrina_HIv1___Sc0000003	14081700	14082741	1042	861	343	0.0313588850174216	-	UAACAUCUCUCUUUCCGACUUUAACAGC	48	6	830	4	4	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14083663-14084097	Cluster_1554	Pocillopora_meandrina_HIv1___Sc0000003	14083663	14084097	435	637	269	0.08791208791208792	-	UGAUGGAUCACUGCUUGACUUGUUGCA	53	28	534	5	5	19	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14084348-14085920	Cluster_1555	Pocillopora_meandrina_HIv1___Sc0000003	14084348	14085920	1573	3862	1003	0.020973588814085967	-	UUAACGCGUGAACUGCUGAAUACUGGC	248	52	3674	26	23	36	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14157467-14157881	Cluster_1556	Pocillopora_meandrina_HIv1___Sc0000003	14157467	14157881	415	99	7	1.0	+	GAAUCGGCCGUGGGC	82	99	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14165185-14165662	Cluster_1557	Pocillopora_meandrina_HIv1___Sc0000003	14165185	14165662	478	317	102	0.006309148264984227	-	UCGUUCAUUUACAAGAUUUGCCGCUUCGC	63	3	310	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14220817-14221702	Cluster_1558	Pocillopora_meandrina_HIv1___Sc0000003	14220817	14221702	886	575	113	0.9860869565217392	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	76	4	559	2	3	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14274955-14275375	Cluster_1559	Pocillopora_meandrina_HIv1___Sc0000003	14274955	14275375	421	393	138	0.25699745547073793	.	UUCGCGUCUGAAGCUGUUAG	87	227	32	38	59	30	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14363055-14363483	Cluster_1560	Pocillopora_meandrina_HIv1___Sc0000003	14363055	14363483	429	418	37	1.0	+	UGAAAGACUCCAAUAAAACUCCUCUUU	163	29	349	5	7	21	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14394453-14394954	Cluster_1561	Pocillopora_meandrina_HIv1___Sc0000003	14394453	14394954	502	214	61	0.07476635514018691	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	28	0	209	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14417208-14417843	Cluster_1562	Pocillopora_meandrina_HIv1___Sc0000003	14417208	14417843	636	957	132	0.9947753396029259	+	UUGGAACGUGUUGCUGAACGCUUGUUA	297	16	917	1	6	2	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14422810-14423791	Cluster_1563	Pocillopora_meandrina_HIv1___Sc0000003	14422810	14423791	982	2008	386	0.9795816733067729	+	UAAGCAAUCAACUCCAACAAACUCGUC	547	42	1896	42	3	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14456836-14457261	Cluster_1564	Pocillopora_meandrina_HIv1___Sc0000003	14456836	14457261	426	421	53	0.9738717339667459	+	UAAGACAUUGGCAUACUUGGCAUACA	280	4	407	3	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14530563-14530993	Cluster_1565	Pocillopora_meandrina_HIv1___Sc0000003	14530563	14530993	431	267	77	0.9887640449438202	+	UGUAUCUUCGCGUGUCUCUGUGGAUGACU	26	4	261	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14540688-14541196	Cluster_1566	Pocillopora_meandrina_HIv1___Sc0000003	14540688	14541196	509	771	194	0.01556420233463035	-	UUGGAACGUGUUGCUGAACGCUUGUUGUA	161	18	722	4	9	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14577884-14578311	Cluster_1567	Pocillopora_meandrina_HIv1___Sc0000003	14577884	14578311	428	99	29	0.0	-	UUGGUUCUACGGCAUGAGUGAUGACUGU	31	2	97	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14586087-14586513	Cluster_1568	Pocillopora_meandrina_HIv1___Sc0000003	14586087	14586513	427	218	95	0.9036697247706422	+	UGUUAAAUUGGUAGCUGUACAUUUCGAAGC	29	2	199	0	4	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14666900-14667328	Cluster_1569	Pocillopora_meandrina_HIv1___Sc0000003	14666900	14667328	429	406	174	0.874384236453202	+	UGUUUUCUUUGAUCCGCAGACGUGACAC	40	8	373	3	3	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14667551-14668885	Cluster_1570	Pocillopora_meandrina_HIv1___Sc0000003	14667551	14668885	1335	1493	491	0.5773610180843939	.	GGGUUUCGUAUCUUGGACAUGUGGUCACA	154	20	1196	11	43	148	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14670104-14670513	Cluster_1571	Pocillopora_meandrina_HIv1___Sc0000003	14670104	14670513	410	169	104	0.5502958579881657	.	UGAAUUUGCUGAACUAAUUCCUGGAGAGC	6	5	134	5	1	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14733119-14733547	Cluster_1572	Pocillopora_meandrina_HIv1___Sc0000003	14733119	14733547	429	632	69	0.990506329113924	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	302	9	613	2	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14745335-14746974	Cluster_1573	Pocillopora_meandrina_HIv1___Sc0000003	14745335	14746974	1640	4028	1004	0.1112214498510427	-	UUCUUAACGUAGCGCUCUCUGACUUUCC	254	46	3814	20	5	62	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14748358-14748780	Cluster_1574	Pocillopora_meandrina_HIv1___Sc0000003	14748358	14748780	423	379	55	0.002638522427440633	-	AAAGAAGUACAAGUGGUAGGGUC	223	9	43	22	77	225	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14754063-14754691	Cluster_1575	Pocillopora_meandrina_HIv1___Sc0000003	14754063	14754691	629	276	132	0.7318840579710145	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	36	1	241	4	10	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14755390-14755813	Cluster_1576	Pocillopora_meandrina_HIv1___Sc0000003	14755390	14755813	424	152	74	0.9539473684210527	+	UAUUUUCAAACUGCGACGAUUGCUUCUGA	24	3	142	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14760292-14760714	Cluster_1577	Pocillopora_meandrina_HIv1___Sc0000003	14760292	14760714	423	221	131	0.04072398190045249	-	UUGGAUGUGUUCGACUCUUGCGAGUGCG	9	3	209	5	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14763327-14763755	Cluster_1578	Pocillopora_meandrina_HIv1___Sc0000003	14763327	14763755	429	282	53	0.8936170212765957	+	AAGGAAUUCAUGACACACAGCAUCAGACG	55	4	228	5	0	5	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14764345-14764773	Cluster_1579	Pocillopora_meandrina_HIv1___Sc0000003	14764345	14764773	429	139	24	0.03597122302158273	-	UAUGAUCAAAUACUGGAUUUCCAUCAUGC	98	0	138	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14792339-14793038	Cluster_1580	Pocillopora_meandrina_HIv1___Sc0000003	14792339	14793038	700	896	357	0.34598214285714285	.	UGUUUUCUUUGUGUUCAACGUUGCUCGAUC	89	15	829	4	2	17	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14869035-14869461	Cluster_1581	Pocillopora_meandrina_HIv1___Sc0000003	14869035	14869461	427	220	28	0.9954545454545455	+	UGUUGUGGUUUAGGCAUUCUGUAUCUCA	68	4	210	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14949573-14950173	Cluster_1582	Pocillopora_meandrina_HIv1___Sc0000003	14949573	14950173	601	1415	197	0.9731448763250884	+	GAUUGGAACAGUCAUCAGACGGGUGGACA	411	10	1360	6	15	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14950325-14950752	Cluster_1583	Pocillopora_meandrina_HIv1___Sc0000003	14950325	14950752	428	152	61	0.07894736842105263	-	UAUAACGGUUAAUGUUGACGUCUAAACG	32	6	136	1	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15015709-15016123	Cluster_1584	Pocillopora_meandrina_HIv1___Sc0000003	15015709	15016123	415	244	15	0.0	-	GCUAACCUGCCGUCA	188	244	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15082631-15083047	Cluster_1585	Pocillopora_meandrina_HIv1___Sc0000003	15082631	15083047	417	198	10	1.0	+	UGUGCUGGAAUUCACUA	149	198	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15124800-15125215	Cluster_1586	Pocillopora_meandrina_HIv1___Sc0000003	15124800	15125215	416	1146	32	0.0	-	CAUUGCACUUCGACUA	885	1146	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15161970-15162397	Cluster_1587	Pocillopora_meandrina_HIv1___Sc0000003	15161970	15162397	428	219	112	0.1187214611872146	-	UGUUUUGAUCUUAGCGUACUCGUUUGUU	26	1	201	2	2	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15162904-15163330	Cluster_1588	Pocillopora_meandrina_HIv1___Sc0000003	15162904	15163330	427	127	64	0.007874015748031496	-	UGAAUUUCGUCCUUUUCUUUGUCCCAGG	27	1	123	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15172910-15173338	Cluster_1589	Pocillopora_meandrina_HIv1___Sc0000003	15172910	15173338	429	1311	56	1.0	+	UAACUUCAACUAGAUCGAAAUGCUUGUGA	963	0	1311	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15177574-15178003	Cluster_1590	Pocillopora_meandrina_HIv1___Sc0000003	15177574	15178003	430	383	140	0.9921671018276762	+	CAAGUGCUGCUUCUGCUACCUGGACAGAUU	45	8	367	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15183104-15183550	Cluster_1591	Pocillopora_meandrina_HIv1___Sc0000003	15183104	15183550	447	1401	180	0.9286224125624554	+	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	589	6	1357	8	4	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15184558-15184986	Cluster_1592	Pocillopora_meandrina_HIv1___Sc0000003	15184558	15184986	429	124	46	0.03225806451612903	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	18	0	121	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15261067-15261497	Cluster_1593	Pocillopora_meandrina_HIv1___Sc0000003	15261067	15261497	431	194	57	0.23711340206185566	.	UGUUAAAUUACGAUGCUUCUAACAGUUCUGA	31	4	126	1	1	24	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15349508-15349937	Cluster_1594	Pocillopora_meandrina_HIv1___Sc0000003	15349508	15349937	430	1275	110	0.9992156862745099	+	GAUUGGAACAGUCAUCAGACGGGUGGACA	481	5	1233	4	18	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15354686-15355112	Cluster_1595	Pocillopora_meandrina_HIv1___Sc0000003	15354686	15355112	427	158	16	1.0	+	UGUUGUGGUUUAGGCAUUCUGUAUCUCC	48	3	148	0	0	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15371508-15371934	Cluster_1596	Pocillopora_meandrina_HIv1___Sc0000003	15371508	15371934	427	204	119	0.8431372549019608	+	UGAGUCGAGGUUAUUCACAAUACGAGC	33	9	174	0	0	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15391885-15392481	Cluster_1597	Pocillopora_meandrina_HIv1___Sc0000003	15391885	15392481	597	5572	524	0.9971284996410624	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	880	22	5508	1	3	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15400240-15400668	Cluster_1598	Pocillopora_meandrina_HIv1___Sc0000003	15400240	15400668	429	644	77	0.9953416149068323	+	UAUGAUUGCUUGAAAUUGUUAGACCA	401	9	634	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15406618-15407036	Cluster_1599	Pocillopora_meandrina_HIv1___Sc0000003	15406618	15407036	419	97	41	1.0	+	UACGAUGAACUCUUCUGCUAUUGUGGAGA	31	1	94	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15410924-15411542	Cluster_1600	Pocillopora_meandrina_HIv1___Sc0000003	15410924	15411542	619	792	265	0.9078282828282829	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	64	9	747	4	6	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15411937-15412345	Cluster_1601	Pocillopora_meandrina_HIv1___Sc0000003	15411937	15412345	409	167	97	0.5508982035928144	.	ACUGGAUACAAAACUGCUCGAUGC	30	1	112	0	1	6	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15414332-15414760	Cluster_1602	Pocillopora_meandrina_HIv1___Sc0000003	15414332	15414760	429	154	68	1.0	+	UGUUAUUUGUUCUGGCGAUCUUUCAUCGA	30	6	146	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15416696-15417125	Cluster_1603	Pocillopora_meandrina_HIv1___Sc0000003	15416696	15417125	430	1175	110	0.9982978723404256	+	UUGGAUCCCGUAACUCUGGAAAGCUCAG	311	14	1153	3	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15417616-15418454	Cluster_1604	Pocillopora_meandrina_HIv1___Sc0000003	15417616	15418454	839	562	214	0.9519572953736655	+	UGUAAGUCUACAGUAGAUUUGGAGGUG	40	18	516	4	2	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15420028-15420442	Cluster_1605	Pocillopora_meandrina_HIv1___Sc0000003	15420028	15420442	415	130	12	0.046153846153846156	-	GUGGAAGGUAGGUCA	115	124	4	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15421409-15421836	Cluster_1606	Pocillopora_meandrina_HIv1___Sc0000003	15421409	15421836	428	166	81	0.9939759036144579	+	UUGGAUGACGUCUUCACUGACUUUGUGGUC	10	6	156	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15431985-15432412	Cluster_1607	Pocillopora_meandrina_HIv1___Sc0000003	15431985	15432412	428	116	22	0.9913793103448276	+	UGAAAUCUACAAACUUGAAAUACUCAGC	41	2	114	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15450947-15451676	Cluster_1608	Pocillopora_meandrina_HIv1___Sc0000003	15450947	15451676	730	4054	492	0.9935865811544153	+	UAAGACAUUGGUAUACUUCGCAUGCAAGG	397	45	3906	6	26	50	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15452121-15452743	Cluster_1609	Pocillopora_meandrina_HIv1___Sc0000003	15452121	15452743	623	1081	243	0.9953746530989824	+	UUGACUCAACCACUUAACAAGAGCUAGACA	357	8	1049	2	6	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15453438-15454306	Cluster_1610	Pocillopora_meandrina_HIv1___Sc0000003	15453438	15454306	869	5151	550	0.9400116482236459	+	UAUGAUCUGGAUAUAUUGUACAUUUUC	852	34	4796	37	32	53	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15454828-15455243	Cluster_1611	Pocillopora_meandrina_HIv1___Sc0000003	15454828	15455243	416	232	71	0.9482758620689655	+	UGUAUCCCAACCAAGU	132	139	83	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15455863-15456299	Cluster_1612	Pocillopora_meandrina_HIv1___Sc0000003	15455863	15456299	437	3557	258	0.9848186674163621	+	UACUGCUCUUCAGUUUCUGUGUUUUCAGGC	1311	4	3518	3	1	6	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15473030-15473432	Cluster_1613	Pocillopora_meandrina_HIv1___Sc0000003	15473030	15473432	403	171	84	0.631578947368421	.	UGCUGAAUCCAGUCUCUUUUUAGACAACU	11	5	149	1	3	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15477016-15477447	Cluster_1614	Pocillopora_meandrina_HIv1___Sc0000003	15477016	15477447	432	739	153	0.9742895805142084	+	UGUAAUCUCAAUGCUGGUGCUCUGGCAC	143	3	699	0	0	20	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15478461-15479039	Cluster_1615	Pocillopora_meandrina_HIv1___Sc0000003	15478461	15479039	579	4972	281	0.06697506033789219	-	CUGGAUUUCAAAAAGAACCUAA	3327	52	1070	119	3693	5	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15480587-15481046	Cluster_1616	Pocillopora_meandrina_HIv1___Sc0000003	15480587	15481046	460	435	206	0.4827586206896552	.	UCGGUGCCACAACUGACUGAAAUUUAAUUC	36	11	355	4	4	10	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15481085-15481494	Cluster_1617	Pocillopora_meandrina_HIv1___Sc0000003	15481085	15481494	410	333	138	0.5675675675675675	.	UACGAUCGUAGUUCCAGUACGGAAA	26	4	295	2	4	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15487197-15487656	Cluster_1618	Pocillopora_meandrina_HIv1___Sc0000003	15487197	15487656	460	936	229	0.23076923076923078	.	UGUGAGCGAAAACGACCGUGAAACGAACG	69	8	738	33	23	78	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15495968-15496395	Cluster_1619	Pocillopora_meandrina_HIv1___Sc0000003	15495968	15496395	428	138	33	0.028985507246376812	-	UUGACGUUCGCUCCAGAAAGCGUUGGAGA	56	38	90	7	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15497524-15498143	Cluster_1620	Pocillopora_meandrina_HIv1___Sc0000003	15497524	15498143	620	312	117	0.9647435897435898	+	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	57	0	306	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15939759-15941463	Cluster_1621	Pocillopora_meandrina_HIv1___Sc0000003	15939759	15941463	1705	221363	2771	0.9999096506642935	+	GACUUGAAGCGGUUGGA	24806	187796	1495	18838	7974	3202	2058	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16071252-16072364	Cluster_1622	Pocillopora_meandrina_HIv1___Sc0000003	16071252	16072364	1113	50021	2125	0.9998600587753144	+	GGUGGACUGCUUGCAGU	3416	31449	7016	1981	6087	2116	1372	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16161170-16161597	Cluster_1623	Pocillopora_meandrina_HIv1___Sc0000003	16161170	16161597	428	125	35	0.968	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	43	0	123	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16162242-16162671	Cluster_1624	Pocillopora_meandrina_HIv1___Sc0000003	16162242	16162671	430	202	75	0.9405940594059405	+	UAAUGGGAAAACGAGAACAGCGUGAGUGU	36	2	182	1	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16173599-16174217	Cluster_1625	Pocillopora_meandrina_HIv1___Sc0000003	16173599	16174217	619	93771	3606	0.999221507715605	+	UGAGAUUAAGCCUUUGUUCUAAGAUUUGU	19735	28789	50722	4442	2197	3543	4078	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16338468-16338888	Cluster_1626	Pocillopora_meandrina_HIv1___Sc0000003	16338468	16338888	421	186	99	0.10752688172043011	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	18	3	176	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16356576-16357005	Cluster_1627	Pocillopora_meandrina_HIv1___Sc0000003	16356576	16357005	430	240	128	0.8083333333333333	+	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	14	1	225	2	0	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16358521-16359354	Cluster_1628	Pocillopora_meandrina_HIv1___Sc0000003	16358521	16359354	834	569	237	0.050966608084358524	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	51	2	551	4	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16387251-16387673	Cluster_1629	Pocillopora_meandrina_HIv1___Sc0000003	16387251	16387673	423	195	85	0.8102564102564103	+	AAGCAGAAUUCGCCAAGC	17	38	150	3	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16784532-16784939	Cluster_1630	Pocillopora_meandrina_HIv1___Sc0000003	16784532	16784939	408	121	58	0.9917355371900827	+	AGACCCAUGGCAGACUUUUUG	40	25	30	46	14	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16794495-16794928	Cluster_1631	Pocillopora_meandrina_HIv1___Sc0000003	16794495	16794928	434	238	74	0.19327731092436976	-	UUCAUGACUUCCAAACAUUUCUUUGUCGA	50	0	237	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16874332-16874746	Cluster_1632	Pocillopora_meandrina_HIv1___Sc0000003	16874332	16874746	415	88	13	0.011363636363636364	-	GGCCGUGAUCGUAUAG	31	86	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16918402-16918829	Cluster_1633	Pocillopora_meandrina_HIv1___Sc0000003	16918402	16918829	428	248	133	0.8508064516129032	+	UAAUUAGACUUGGAUGCGUGAUGCGAUA	24	4	233	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16943989-16944596	Cluster_1634	Pocillopora_meandrina_HIv1___Sc0000003	16943989	16944596	608	396	106	0.010101010101010102	-	UACCAUAGAACUUUCAAGAACAUUUCAUC	140	8	367	3	5	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17032395-17032822	Cluster_1635	Pocillopora_meandrina_HIv1___Sc0000003	17032395	17032822	428	205	27	0.18048780487804877	-	UUUCCAGGUUGUCUGAUAAUUGUUGGGC	53	1	200	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17044493-17044906	Cluster_1636	Pocillopora_meandrina_HIv1___Sc0000003	17044493	17044906	414	117	42	0.6581196581196581	.	CGUCCGUCGUGAAAA	12	75	37	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17111098-17111524	Cluster_1637	Pocillopora_meandrina_HIv1___Sc0000003	17111098	17111524	427	156	62	0.038461538461538464	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	34	0	151	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17261321-17261748	Cluster_1638	Pocillopora_meandrina_HIv1___Sc0000003	17261321	17261748	428	83	20	0.0	-	UUGCAAUUGAAGACGAUCUCGGGCGCCCA	52	1	82	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17413456-17414292	Cluster_1639	Pocillopora_meandrina_HIv1___Sc0000003	17413456	17414292	837	996	298	0.6506024096385542	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	159	6	950	9	1	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17434778-17435281	Cluster_1640	Pocillopora_meandrina_HIv1___Sc0000003	17434778	17435281	504	24366	104	0.005212180907822376	-	UACCAAGGUCUUGUAGUCUAGUACAACU	14276	26	24253	3	19	18	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17468775-17469200	Cluster_1641	Pocillopora_meandrina_HIv1___Sc0000003	17468775	17469200	426	95	20	0.2	.	CUUCAUUCUGAUCUAUUGUUACAGUUACAAC	40	0	93	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17494744-17495160	Cluster_1642	Pocillopora_meandrina_HIv1___Sc0000003	17494744	17495160	417	128	60	0.171875	-	CUCUGUAGCAGUCAAUU	32	52	69	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17512565-17513156	Cluster_1643	Pocillopora_meandrina_HIv1___Sc0000003	17512565	17513156	592	2964	405	0.9669365721997301	+	AAGGAGUUGAAAAGAACAAUGAUGUAGC	362	47	2818	8	16	30	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17513340-17514790	Cluster_1644	Pocillopora_meandrina_HIv1___Sc0000003	17513340	17514790	1451	5616	642	0.32211538461538464	.	AAGAAGAUCAGAGAAUGUUAAUUGAGA	542	41	4618	40	256	142	519	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17516367-17516781	Cluster_1645	Pocillopora_meandrina_HIv1___Sc0000003	17516367	17516781	415	139	19	0.9784172661870504	+	AUCCUUCGAUGUCGG	104	132	3	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17530878-17531307	Cluster_1646	Pocillopora_meandrina_HIv1___Sc0000003	17530878	17531307	430	416	42	1.0	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	162	0	416	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17533552-17533978	Cluster_1647	Pocillopora_meandrina_HIv1___Sc0000003	17533552	17533978	427	177	66	0.01694915254237288	-	CAAAAACGCAUUUUCCUGCAAUCUGGA	33	8	131	0	3	32	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17622970-17623392	Cluster_1648	Pocillopora_meandrina_HIv1___Sc0000003	17622970	17623392	423	128	21	0.9921875	+	GAGGACUUUGUAGCAACCUUGAC	41	38	35	1	0	41	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17651813-17652242	Cluster_1649	Pocillopora_meandrina_HIv1___Sc0000003	17651813	17652242	430	442	34	0.997737556561086	+	GUGUAGAUCAGCCGACUUCAACAUGUCUUA	162	1	441	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17729364-17729792	Cluster_1650	Pocillopora_meandrina_HIv1___Sc0000003	17729364	17729792	429	318	151	0.07232704402515723	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	27	9	278	1	2	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17730014-17730841	Cluster_1651	Pocillopora_meandrina_HIv1___Sc0000003	17730014	17730841	828	1134	281	0.05555555555555555	-	UAAAGUUUACUUGUUGUUCUUCUCUGAGU	166	10	1075	3	3	29	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17733611-17734037	Cluster_1652	Pocillopora_meandrina_HIv1___Sc0000003	17733611	17734037	427	174	71	0.005747126436781609	-	UUUGAUUGACGUACGGUAUUUGAGACGC	21	5	165	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17787052-17787502	Cluster_1653	Pocillopora_meandrina_HIv1___Sc0000003	17787052	17787502	451	488	161	0.1290983606557377	-	UUAUUUUUGUUUCAAAUCGCCAUGUUCACU	73	14	422	4	3	5	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17824871-17825300	Cluster_1654	Pocillopora_meandrina_HIv1___Sc0000003	17824871	17825300	430	389	40	0.9922879177377892	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	168	2	386	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17891379-17891806	Cluster_1655	Pocillopora_meandrina_HIv1___Sc0000003	17891379	17891806	428	304	59	0.003289473684210526	-	UAGGCUGGUACCUUUGAAAAUUGAGGGC	52	4	274	1	1	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17906949-17907368	Cluster_1656	Pocillopora_meandrina_HIv1___Sc0000003	17906949	17907368	420	98	35	0.673469387755102	.	GCAACUUCCGCCUAGACUGAC	39	19	7	61	7	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17907446-17907876	Cluster_1657	Pocillopora_meandrina_HIv1___Sc0000003	17907446	17907876	431	864	146	0.0	-	AAGGAAACAAAUCGGUUUAAACUCACAUU	222	33	799	5	9	13	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17971672-17972100	Cluster_1658	Pocillopora_meandrina_HIv1___Sc0000003	17971672	17972100	429	157	38	0.9936305732484076	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	71	0	152	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17986627-17987042	Cluster_1659	Pocillopora_meandrina_HIv1___Sc0000003	17986627	17987042	416	228	31	0.9824561403508771	+	GACACUCUGUCUCGUA	69	226	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18010570-18011565	Cluster_1660	Pocillopora_meandrina_HIv1___Sc0000003	18010570	18011565	996	7604	553	0.9838243029984218	+	UUGGACUGUGCAUAACCAUUUGU	2063	83	5173	4	96	2133	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18046159-18046588	Cluster_1661	Pocillopora_meandrina_HIv1___Sc0000003	18046159	18046588	430	356	134	1.0	+	GAAUCUUAAUCUUCUCUCUGAGCAUA	20	96	162	27	23	18	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18052632-18053169	Cluster_1662	Pocillopora_meandrina_HIv1___Sc0000003	18052632	18053169	538	7702	821	0.0019475460919241756	-	CUGUGCCGACGACUGGAGACAC	1027	1088	1556	907	1736	1385	1030	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18105568-18105995	Cluster_1663	Pocillopora_meandrina_HIv1___Sc0000003	18105568	18105995	428	83	8	0.9759036144578314	+	UUGUCUACAGGAAGCCUGUCCAUUUUGU	76	2	78	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18106323-18106749	Cluster_1664	Pocillopora_meandrina_HIv1___Sc0000003	18106323	18106749	427	249	149	0.13253012048192772	-	UGAGUCGAGGUUAUUCACAAUACGAGC	29	10	212	1	2	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18107408-18107834	Cluster_1665	Pocillopora_meandrina_HIv1___Sc0000003	18107408	18107834	427	87	19	0.08045977011494253	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	47	2	80	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18350656-18351071	Cluster_1666	Pocillopora_meandrina_HIv1___Sc0000003	18350656	18351071	416	80	10	0.0	-	ACGACUUAAAUAAAGAACA	48	77	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18358791-18359210	Cluster_1667	Pocillopora_meandrina_HIv1___Sc0000003	18358791	18359210	420	123	42	0.008130081300813009	-	CGGAGACGUCGAAUUCUGG	19	53	55	7	7	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18668900-18669328	Cluster_1668	Pocillopora_meandrina_HIv1___Sc0000003	18668900	18669328	429	156	29	0.01282051282051282	-	UUCGAUCUUAAAUUUACUGCAUGUUUCUA	60	1	152	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18739258-18739688	Cluster_1669	Pocillopora_meandrina_HIv1___Sc0000003	18739258	18739688	431	293	137	0.9931740614334471	+	UAUUUUUAAUCUCUUGCAUACCCUGUUGG	29	2	287	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18836097-18836531	Cluster_1670	Pocillopora_meandrina_HIv1___Sc0000003	18836097	18836531	435	350	97	0.8371428571428572	+	AUUGAUUCUAUUUUGUACGGCCUAGU	89	8	327	0	4	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18887952-18888505	Cluster_1671	Pocillopora_meandrina_HIv1___Sc0000003	18887952	18888505	554	2268	287	0.9052028218694885	+	UGAAGUCGAGCUAGAAGAGGA	523	1015	504	645	76	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19021624-19022036	Cluster_1672	Pocillopora_meandrina_HIv1___Sc0000003	19021624	19022036	413	206	152	0.9466019417475728	+	GAGGCUGUAGAGACU	6	102	42	23	17	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19027731-19028192	Cluster_1673	Pocillopora_meandrina_HIv1___Sc0000003	19027731	19028192	462	607	230	1.0	+	AUGCUGCCUUCCUUCUGAUA	41	251	195	66	30	24	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19032558-19032979	Cluster_1674	Pocillopora_meandrina_HIv1___Sc0000003	19032558	19032979	422	454	301	0.9977973568281938	+	CAUGUAUGUGGUCUUGAAAGA	9	99	212	46	29	29	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19040021-19040486	Cluster_1675	Pocillopora_meandrina_HIv1___Sc0000003	19040021	19040486	466	509	196	0.0	-	GAGAAAACCAUGCUGCCUUCCUUCUGAUA	33	179	183	54	25	36	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19253234-19253686	Cluster_1676	Pocillopora_meandrina_HIv1___Sc0000003	19253234	19253686	453	1321	189	0.9303557910673732	+	UGAAGACUGGUCCUGAUAUCAUCAUAU	210	32	1201	8	5	60	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19272674-19273104	Cluster_1677	Pocillopora_meandrina_HIv1___Sc0000003	19272674	19273104	431	99	38	0.9393939393939394	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	0	95	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19309395-19309800	Cluster_1678	Pocillopora_meandrina_HIv1___Sc0000003	19309395	19309800	406	84	18	0.8809523809523809	+	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	48	0	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19321353-19321778	Cluster_1679	Pocillopora_meandrina_HIv1___Sc0000003	19321353	19321778	426	150	62	0.9533333333333334	+	UAGGAUCGUUCUAGAAAACCAGCGUAAGA	28	3	138	1	4	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19363636-19364058	Cluster_1680	Pocillopora_meandrina_HIv1___Sc0000003	19363636	19364058	423	84	33	1.0	+	UGUGUAGAUAUGUCUUUUGGACAGGA	24	0	83	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12834-13750	Cluster_1681	Pocillopora_meandrina_HIv1___Sc0000004	12834	13750	917	963	375	0.8234683281412254	+	UGUUGAUUGCUGGUUGAAUAUGAUGUC	58	36	832	7	14	27	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13981-14409	Cluster_1682	Pocillopora_meandrina_HIv1___Sc0000004	13981	14409	429	144	18	1.0	+	UUGACUGACAGAAGAUCUGGAAACUGAAGA	48	1	141	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:59217-59730	Cluster_1683	Pocillopora_meandrina_HIv1___Sc0000004	59217	59730	514	602	242	0.20431893687707642	.	UCAAAGCUUUUAUCAACUGUGGGAAGUCC	23	5	543	5	3	20	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:59999-60410	Cluster_1684	Pocillopora_meandrina_HIv1___Sc0000004	59999	60410	412	198	90	0.020202020202020204	-	UGUGGUUACGCCCUUCAAGUGAGAAAACUGA	37	2	191	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:61957-62666	Cluster_1685	Pocillopora_meandrina_HIv1___Sc0000004	61957	62666	710	329	138	0.0851063829787234	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	43	2	298	1	7	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:232184-233960	Cluster_1686	Pocillopora_meandrina_HIv1___Sc0000004	232184	233960	1777	4180	1403	0.9983253588516746	+	GGGGCGAUAAACCAUACAAUGGACAUUU	450	772	2707	134	175	220	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:234171-234601	Cluster_1687	Pocillopora_meandrina_HIv1___Sc0000004	234171	234601	431	491	312	0.9979633401221996	+	UGGCAUAAUCUGUGUGGAGGACCUCAUUC	19	129	238	22	31	31	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:259608-260035	Cluster_1688	Pocillopora_meandrina_HIv1___Sc0000004	259608	260035	428	143	33	0.7062937062937062	.	UGAAAUUCCGAAUAAGUUCUCCAAAACC	43	3	136	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:270457-271009	Cluster_1689	Pocillopora_meandrina_HIv1___Sc0000004	270457	271009	553	238	77	0.8949579831932774	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	37	3	202	0	5	19	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:271362-271961	Cluster_1690	Pocillopora_meandrina_HIv1___Sc0000004	271362	271961	600	1481	277	0.8149898717083052	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	498	10	1402	6	8	10	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:396741-397439	Cluster_1691	Pocillopora_meandrina_HIv1___Sc0000004	396741	397439	699	657	182	0.1324200913242009	-	UUGGAUAAUUUUGACGAAACCAGAGACA	179	5	587	2	13	11	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:397704-398313	Cluster_1692	Pocillopora_meandrina_HIv1___Sc0000004	397704	398313	610	555	232	0.6936936936936937	.	UUAACUCCGAGGACACUCUUAGAAGGAUA	38	12	449	1	1	30	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:398645-399791	Cluster_1693	Pocillopora_meandrina_HIv1___Sc0000004	398645	399791	1147	1237	330	0.7485852869846402	.	AGCAUACUCGAAGAACUGCAAGUUAAUGGA	125	122	1076	5	9	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:400950-401796	Cluster_1694	Pocillopora_meandrina_HIv1___Sc0000004	400950	401796	847	628	190	0.2197452229299363	.	UGUGUUCGUUGAAUGGCUCCCCAUGCGG	81	13	594	1	6	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:618407-618834	Cluster_1695	Pocillopora_meandrina_HIv1___Sc0000004	618407	618834	428	199	74	0.9899497487437185	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	35	1	191	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:619070-619497	Cluster_1696	Pocillopora_meandrina_HIv1___Sc0000004	619070	619497	428	354	177	0.8305084745762712	+	UCAUAACUGCUGGUUUGACGUAGUCGUC	34	23	300	3	2	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:620414-620834	Cluster_1697	Pocillopora_meandrina_HIv1___Sc0000004	620414	620834	421	75	21	1.0	+	UAUUUGCACCGUUUUUCUUGAAUAUAGA	30	0	73	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:733349-733765	Cluster_1698	Pocillopora_meandrina_HIv1___Sc0000004	733349	733765	417	769	17	0.0	-	GACUCGGCCGUGGAUU	454	769	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:741145-741560	Cluster_1699	Pocillopora_meandrina_HIv1___Sc0000004	741145	741560	416	201	10	0.004975124378109453	-	GGGGGUGUGGCGGAAU	127	201	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:777820-778234	Cluster_1700	Pocillopora_meandrina_HIv1___Sc0000004	777820	778234	415	277	7	1.0	+	CUUUCCGAGGUCGGG	236	277	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:791121-791723	Cluster_1701	Pocillopora_meandrina_HIv1___Sc0000004	791121	791723	603	410	139	0.10975609756097561	-	UCGGACUGUGCAUAACCAUUUGCAAAC	102	1	397	1	4	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1005934-1006361	Cluster_1702	Pocillopora_meandrina_HIv1___Sc0000004	1005934	1006361	428	91	20	0.989010989010989	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	27	1	89	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1197941-1198368	Cluster_1703	Pocillopora_meandrina_HIv1___Sc0000004	1197941	1198368	428	293	51	0.06484641638225255	-	UGUGCAAUAUUAACUCUAAGCUGGUCUU	138	0	291	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1599741-1600171	Cluster_1704	Pocillopora_meandrina_HIv1___Sc0000004	1599741	1600171	431	276	5	0.0	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	272	0	276	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1686231-1686659	Cluster_1705	Pocillopora_meandrina_HIv1___Sc0000004	1686231	1686659	429	155	23	0.0	-	UGAAGAUUUGAACAAUGUAAGAAUUGAAC	113	0	155	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1746478-1746899	Cluster_1706	Pocillopora_meandrina_HIv1___Sc0000004	1746478	1746899	422	97	2	0.0	-	UCUGACGAAGGGCUGACACUCG	96	0	0	0	96	1	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1820718-1821133	Cluster_1707	Pocillopora_meandrina_HIv1___Sc0000004	1820718	1821133	416	574	28	0.003484320557491289	-	UGCUUGCAGUGCUCA	432	573	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1826771-1827308	Cluster_1708	Pocillopora_meandrina_HIv1___Sc0000004	1826771	1827308	538	480	156	0.004166666666666667	-	UGAGUUGCACAGGACACCAACAUGU	44	153	152	29	62	27	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2224061-2224490	Cluster_1709	Pocillopora_meandrina_HIv1___Sc0000004	2224061	2224490	430	190	56	0.9842105263157894	+	AAACUGAUAAUAAUGCUCUCUGUGUCAUGC	69	3	160	0	1	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2261094-2261570	Cluster_1710	Pocillopora_meandrina_HIv1___Sc0000004	2261094	2261570	477	383	73	0.7754569190600522	.	UAAUCUUCAAUGGACGAUGCCAACUCUUUGA	184	2	371	3	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2308935-2309364	Cluster_1711	Pocillopora_meandrina_HIv1___Sc0000004	2308935	2309364	430	2707	73	0.009235315847801994	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAA	952	707	1965	18	8	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2741143-2741832	Cluster_1712	Pocillopora_meandrina_HIv1___Sc0000004	2741143	2741832	690	817	208	0.9192166462668299	+	AUUUGUGAAAGAAAUGAUUUGGAGACCCC	104	24	704	6	19	8	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2742408-2742838	Cluster_1713	Pocillopora_meandrina_HIv1___Sc0000004	2742408	2742838	431	1470	144	0.029251700680272108	-	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	410	5	1454	5	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2743587-2744025	Cluster_1714	Pocillopora_meandrina_HIv1___Sc0000004	2743587	2744025	439	278	50	0.7194244604316546	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	94	7	263	4	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2744502-2745276	Cluster_1715	Pocillopora_meandrina_HIv1___Sc0000004	2744502	2745276	775	1234	230	0.6369529983792545	.	UCACCAUGAAAAGACUCUGGGCCAAAG	137	5	1166	3	2	16	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2776672-2777091	Cluster_1716	Pocillopora_meandrina_HIv1___Sc0000004	2776672	2777091	420	2542	27	0.9996066089693155	+	GAAGUUCUGGUUUAAAAAA	1032	2535	0	6	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2790502-2791317	Cluster_1717	Pocillopora_meandrina_HIv1___Sc0000004	2790502	2791317	816	3172	548	0.04224464060529634	-	UGUUUACGUUGUGCAUCCAUGGUUUUGU	434	8	3081	10	11	17	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2799128-2801579	Cluster_1718	Pocillopora_meandrina_HIv1___Sc0000004	2799128	2801579	2452	11870	3058	0.040522325189553496	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	467	160	10863	61	83	175	528	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2802251-2802794	Cluster_1719	Pocillopora_meandrina_HIv1___Sc0000004	2802251	2802794	544	449	214	0.18930957683741648	-	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	100	11	397	5	12	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2813610-2814136	Cluster_1720	Pocillopora_meandrina_HIv1___Sc0000004	2813610	2814136	527	460	260	0.013043478260869565	-	CUGCGAACUGCUUUGAGCCA	13	215	160	22	20	23	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2814162-2814568	Cluster_1721	Pocillopora_meandrina_HIv1___Sc0000004	2814162	2814568	407	321	209	0.009345794392523364	-	GUUUGCGGUACUUUUUCAGAUUGUUUCGA	8	114	111	17	31	25	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3009069-3009494	Cluster_1722	Pocillopora_meandrina_HIv1___Sc0000004	3009069	3009494	426	122	61	0.13114754098360656	-	AUCUUUUUAAUUCACUGAAUCUCUUGGUA	34	8	107	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3088358-3088780	Cluster_1723	Pocillopora_meandrina_HIv1___Sc0000004	3088358	3088780	423	168	53	0.17857142857142858	-	UUCGCGUCUGAAGCUGUUAGAGU	56	11	27	8	21	98	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3245027-3246119	Cluster_1724	Pocillopora_meandrina_HIv1___Sc0000004	3245027	3246119	1093	130100	14610	0.9991929285165257	+	AAGGCGAGCUCAGCGAGAACA	2002	53020	38535	11216	10649	8103	8577	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3432324-3432751	Cluster_1725	Pocillopora_meandrina_HIv1___Sc0000004	3432324	3432751	428	249	78	0.05220883534136546	-	UCUAGCAGAUCGUACUCCUCAAGGUGCU	53	1	237	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3547202-3547617	Cluster_1726	Pocillopora_meandrina_HIv1___Sc0000004	3547202	3547617	416	268	19	0.996268656716418	+	CUUUCCGAGGUCGGG	139	268	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3605893-3606307	Cluster_1727	Pocillopora_meandrina_HIv1___Sc0000004	3605893	3606307	415	77	6	0.0	-	GAUGAGGCUCAUAAC	66	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3629642-3630377	Cluster_1728	Pocillopora_meandrina_HIv1___Sc0000004	3629642	3630377	736	851	305	0.06462984723854288	-	UCCGUGACACAACGACUUUGCCUUGCUU	122	6	823	5	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3630547-3630980	Cluster_1729	Pocillopora_meandrina_HIv1___Sc0000004	3630547	3630980	434	428	209	0.17523364485981308	-	UAUGACGUUCCAGAAUCUUUGACAAAA	37	4	405	4	4	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3631518-3631940	Cluster_1730	Pocillopora_meandrina_HIv1___Sc0000004	3631518	3631940	423	119	39	0.008403361344537815	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	20	2	116	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3773185-3773605	Cluster_1731	Pocillopora_meandrina_HIv1___Sc0000004	3773185	3773605	421	176	113	0.011363636363636364	-	CAUGGGAUUCGGACUGUUUGACUAACCA	7	57	85	7	9	15	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3776194-3776606	Cluster_1732	Pocillopora_meandrina_HIv1___Sc0000004	3776194	3776606	413	248	171	0.0	-	CACAUCAAAGGCAAUGUAGGCUU	10	80	99	15	20	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3776662-3777077	Cluster_1733	Pocillopora_meandrina_HIv1___Sc0000004	3776662	3777077	416	217	128	0.009216589861751152	-	CUGCGUGGUAGAGCU	18	98	58	14	15	21	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3792382-3792808	Cluster_1734	Pocillopora_meandrina_HIv1___Sc0000004	3792382	3792808	427	144	53	0.9583333333333334	+	UAAUCGUUGGCUUUUUCUCGAGACGUG	26	16	117	7	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3842859-3843307	Cluster_1735	Pocillopora_meandrina_HIv1___Sc0000004	3842859	3843307	449	19742	301	0.00015196028771147807	-	UCCCGGACAGGCCCCCA	7300	19635	90	11	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4084450-4084929	Cluster_1736	Pocillopora_meandrina_HIv1___Sc0000004	4084450	4084929	480	387	77	0.0103359173126615	-	CAACAAAUCAAACUUAGAGGCUCUUCAGCGG	94	3	378	0	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4090054-4090483	Cluster_1737	Pocillopora_meandrina_HIv1___Sc0000004	4090054	4090483	430	259	78	0.9382239382239382	+	UGAACAUUCCGGUAUUCUUUUCGCUGAAUU	59	0	251	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4147734-4148148	Cluster_1738	Pocillopora_meandrina_HIv1___Sc0000004	4147734	4148148	415	80	7	1.0	+	CCGUGUUGUAGGCUG	40	79	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4163017-4163444	Cluster_1739	Pocillopora_meandrina_HIv1___Sc0000004	4163017	4163444	428	250	88	0.956	+	CCAUUUCCCAAGUAGUCUCUCUCAAAGG	56	11	219	2	5	13	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4319817-4320236	Cluster_1740	Pocillopora_meandrina_HIv1___Sc0000004	4319817	4320236	420	162	70	0.8765432098765432	+	UGAAAAACUGUGACCGAGG	11	87	1	39	21	12	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4328550-4328979	Cluster_1741	Pocillopora_meandrina_HIv1___Sc0000004	4328550	4328979	430	516	71	0.9922480620155039	+	CGGCCUAAAAAAAAAAAAAAAAAAAAAAA	88	121	318	12	14	34	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4376006-4376654	Cluster_1742	Pocillopora_meandrina_HIv1___Sc0000004	4376006	4376654	649	761	297	0.1747700394218134	-	UGACUAUCAUCUGAAAGGGGCAAUUGGU	63	33	659	2	13	27	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4376700-4377128	Cluster_1743	Pocillopora_meandrina_HIv1___Sc0000004	4376700	4377128	429	240	80	0.9083333333333333	+	UAUGCAUUCAAUGAUCGUGGUCGG	35	1	165	1	3	7	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4378347-4378756	Cluster_1744	Pocillopora_meandrina_HIv1___Sc0000004	4378347	4378756	410	160	76	0.275	.	UGUUACAAAACCAUUAGAACUAUCAGUU	17	6	129	1	3	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4379913-4380388	Cluster_1745	Pocillopora_meandrina_HIv1___Sc0000004	4379913	4380388	476	272	90	0.9154411764705882	+	UUUUAUCUCUGCUAUUCCCAUAUCAAGG	40	5	261	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4406857-4407272	Cluster_1746	Pocillopora_meandrina_HIv1___Sc0000004	4406857	4407272	416	169	21	1.0	+	UGUCUGAGUGUCUAG	64	169	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4485348-4485775	Cluster_1747	Pocillopora_meandrina_HIv1___Sc0000004	4485348	4485775	428	161	81	0.09316770186335403	-	UAAUGAACGUAUAGCCAUCCAGUUGAACUGG	11	0	155	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4485789-4486375	Cluster_1748	Pocillopora_meandrina_HIv1___Sc0000004	4485789	4486375	587	356	214	0.17415730337078653	-	UGCAAAAGGAUAUAGGAUCAUAAUUAGC	11	5	323	2	4	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4726754-4727168	Cluster_1749	Pocillopora_meandrina_HIv1___Sc0000004	4726754	4727168	415	82	21	0.012195121951219513	-	AAACAUGGCUGAUGAGA	31	81	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4818222-4818644	Cluster_1750	Pocillopora_meandrina_HIv1___Sc0000004	4818222	4818644	423	251	178	0.9920318725099602	+	AAUGCGGUGGAAUCGAUAAA	7	100	82	14	21	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4819056-4819499	Cluster_1751	Pocillopora_meandrina_HIv1___Sc0000004	4819056	4819499	444	352	215	1.0	+	CAAGGCUGAGCGUGAGCGU	21	158	119	22	18	22	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4819737-4820268	Cluster_1752	Pocillopora_meandrina_HIv1___Sc0000004	4819737	4820268	532	503	363	1.0	+	AUUGGUUGUUGCUGCU	7	239	135	46	23	24	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4822065-4822622	Cluster_1753	Pocillopora_meandrina_HIv1___Sc0000004	4822065	4822622	558	568	387	0.9947183098591549	+	CCUGGUGACAAUGUUGGCU	9	218	185	43	54	31	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4822935-4823767	Cluster_1754	Pocillopora_meandrina_HIv1___Sc0000004	4822935	4823767	833	1917	1116	1.0	+	AGUCAAUCAUGCUGUAGUAGUU	25	623	758	119	149	108	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5173418-5173842	Cluster_1755	Pocillopora_meandrina_HIv1___Sc0000004	5173418	5173842	425	94	36	0.0425531914893617	-	UUCUGCCGUUUUGGGCUUGCUUUGCCAUC	21	1	89	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5174422-5174920	Cluster_1756	Pocillopora_meandrina_HIv1___Sc0000004	5174422	5174920	499	1047	187	0.8634192932187201	+	UUCGAGUGCAAAGAUGAAGGAGCU	208	37	725	7	3	45	230	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5175571-5175998	Cluster_1757	Pocillopora_meandrina_HIv1___Sc0000004	5175571	5175998	428	176	67	0.10227272727272728	-	UAUAUUCGCCUGGAAUUAGCCCUCCCCCU	18	6	170	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5176317-5176743	Cluster_1758	Pocillopora_meandrina_HIv1___Sc0000004	5176317	5176743	427	142	46	0.014084507042253521	-	UGGGAUUGCUUACUCCUGGUGUUGGUAUA	22	2	134	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5176979-5177398	Cluster_1759	Pocillopora_meandrina_HIv1___Sc0000004	5176979	5177398	420	114	40	0.5526315789473685	.	UGACAAUGAACUCGACAGAAACUAUUUAG	21	2	109	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5178359-5178782	Cluster_1760	Pocillopora_meandrina_HIv1___Sc0000004	5178359	5178782	424	279	59	0.9354838709677419	+	AUGGACAGAACACAGGAAGUGCU	72	6	94	4	4	139	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5179682-5180102	Cluster_1761	Pocillopora_meandrina_HIv1___Sc0000004	5179682	5180102	421	92	20	0.010869565217391304	-	UGCGUUUCCAUUACUUCUGCGUAGAAUA	28	2	80	0	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5181414-5181831	Cluster_1762	Pocillopora_meandrina_HIv1___Sc0000004	5181414	5181831	418	94	37	0.031914893617021274	-	UGAAAUCUCCUGCUCCCUCUUUAAUGAGC	25	5	85	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5206769-5207196	Cluster_1763	Pocillopora_meandrina_HIv1___Sc0000004	5206769	5207196	428	184	49	0.02717391304347826	-	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	56	3	177	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5570359-5571044	Cluster_1764	Pocillopora_meandrina_HIv1___Sc0000004	5570359	5571044	686	4349	182	0.01494596458956082	-	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	1953	2	4299	0	9	9	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5608105-5608519	Cluster_1765	Pocillopora_meandrina_HIv1___Sc0000004	5608105	5608519	415	182	22	1.0	+	GAGACUUGAAGCGGC	102	182	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5736997-5737411	Cluster_1766	Pocillopora_meandrina_HIv1___Sc0000004	5736997	5737411	415	167	4	0.9940119760479041	+	AUGGACUAUGAUUUU	153	167	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5739982-5740397	Cluster_1767	Pocillopora_meandrina_HIv1___Sc0000004	5739982	5740397	416	13987	21	1.0	+	UUCCGAGGUCGCGGUU	13742	13986	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5767384-5767798	Cluster_1768	Pocillopora_meandrina_HIv1___Sc0000004	5767384	5767798	415	178	3	1.0	+	AUGGACUAUGAUUUU	171	178	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5818426-5818896	Cluster_1769	Pocillopora_meandrina_HIv1___Sc0000004	5818426	5818896	471	766	265	0.9973890339425587	+	ACCAGGAUGGCCGAGU	112	570	90	33	21	22	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6086442-6086870	Cluster_1770	Pocillopora_meandrina_HIv1___Sc0000004	6086442	6086870	429	163	39	0.9938650306748467	+	UCAACAUUUGUACUAUGCUGCUCACCCAGU	33	5	153	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6129913-6130370	Cluster_1771	Pocillopora_meandrina_HIv1___Sc0000004	6129913	6130370	458	304	121	0.6019736842105263	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	56	4	228	2	14	27	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6156616-6157953	Cluster_1772	Pocillopora_meandrina_HIv1___Sc0000004	6156616	6157953	1338	6308	1323	0.16407736207989854	-	UCACAGGUAUAUAUUCUAUCGCUCUUCAAC	932	107	5835	29	50	109	178	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6169126-6169554	Cluster_1773	Pocillopora_meandrina_HIv1___Sc0000004	6169126	6169554	429	617	77	0.9967585089141004	+	UCAGAGAUGUCAACCUUAUUGCUACUAGC	294	6	606	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6184636-6185065	Cluster_1774	Pocillopora_meandrina_HIv1___Sc0000004	6184636	6185065	430	118	32	1.0	+	UCAACAUGUGUACUAUGCUGCUCACCCGGU	34	1	114	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6216721-6217149	Cluster_1775	Pocillopora_meandrina_HIv1___Sc0000004	6216721	6217149	429	241	117	0.7842323651452282	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	59	55	165	13	4	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6226334-6226763	Cluster_1776	Pocillopora_meandrina_HIv1___Sc0000004	6226334	6226763	430	115	34	1.0	+	UCAACAUGUGUACUAUGCUGCUCACCCGGU	28	0	112	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6280470-6280899	Cluster_1777	Pocillopora_meandrina_HIv1___Sc0000004	6280470	6280899	430	197	75	0.9847715736040609	+	UCAACAUGUGUACUAUGCUGCUCACUCGGU	45	11	172	3	5	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6320163-6320581	Cluster_1778	Pocillopora_meandrina_HIv1___Sc0000004	6320163	6320581	419	124	61	0.08064516129032258	-	UACUAGAAUCUAACGAACAGCUCGAACACU	14	2	118	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6321492-6321909	Cluster_1779	Pocillopora_meandrina_HIv1___Sc0000004	6321492	6321909	418	152	81	0.7828947368421053	.	UGUUCUGUGGACACAAUCGAC	18	88	5	48	6	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6357059-6357488	Cluster_1780	Pocillopora_meandrina_HIv1___Sc0000004	6357059	6357488	430	417	40	0.002398081534772182	-	ACAACACUUGUAUUAUGCCGCUCACUCAGU	163	28	359	2	10	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6506657-6507473	Cluster_1781	Pocillopora_meandrina_HIv1___Sc0000004	6506657	6507473	817	2165	539	0.17136258660508083	-	UACUGUACCAUCUAUGAAGCCAAAGCAAUU	296	22	1885	10	11	45	192	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6508196-6508662	Cluster_1782	Pocillopora_meandrina_HIv1___Sc0000004	6508196	6508662	467	796	235	0.9396984924623115	+	UGAAACUGUUGCAUUUGAUUCUGUUGCUGC	67	6	771	3	3	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6508734-6509166	Cluster_1783	Pocillopora_meandrina_HIv1___Sc0000004	6508734	6509166	433	434	201	0.7188940092165899	.	UGUUAACUUUAAAUCUUGGAAUUUUCA	85	23	339	9	11	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6593926-6594397	Cluster_1784	Pocillopora_meandrina_HIv1___Sc0000004	6593926	6594397	472	295	138	0.8813559322033898	+	GGUGAGAGACUGUGACCGAGG	24	155	12	75	30	15	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6749437-6750138	Cluster_1785	Pocillopora_meandrina_HIv1___Sc0000004	6749437	6750138	702	608	140	0.6858552631578947	.	UAGGAAGAUACAAGACUACAAAUUUU	78	14	541	4	3	18	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6750183-6750612	Cluster_1786	Pocillopora_meandrina_HIv1___Sc0000004	6750183	6750612	430	317	62	0.9873817034700315	+	UUAAUGCGGGAAACAGUACUAAUUACAUC	110	5	296	2	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6754228-6754644	Cluster_1787	Pocillopora_meandrina_HIv1___Sc0000004	6754228	6754644	417	101	9	0.9801980198019802	+	CGAGACGAGACGAGGAAA	51	101	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6758212-6758642	Cluster_1788	Pocillopora_meandrina_HIv1___Sc0000004	6758212	6758642	431	178	58	0.9550561797752809	+	AUUACUGGAAAGGCACUUACUGUGGAAAGU	19	3	151	1	1	2	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7204213-7204632	Cluster_1789	Pocillopora_meandrina_HIv1___Sc0000004	7204213	7204632	420	735	36	0.9959183673469387	+	CGGCCUGAAGAAAAAAAA	91	711	1	20	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7260397-7260811	Cluster_1790	Pocillopora_meandrina_HIv1___Sc0000004	7260397	7260811	415	331	16	0.0030211480362537764	-	UAGGGGCGAAAGACA	106	330	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7278323-7278737	Cluster_1791	Pocillopora_meandrina_HIv1___Sc0000004	7278323	7278737	415	397	19	0.9874055415617129	+	CCGUGUUGUAGGCUA	286	393	2	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7299894-7300321	Cluster_1792	Pocillopora_meandrina_HIv1___Sc0000004	7299894	7300321	428	182	29	0.005494505494505495	-	UUAUCUUUGCCAGUUCUGACGUACUCGU	81	3	177	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7319177-7319628	Cluster_1793	Pocillopora_meandrina_HIv1___Sc0000004	7319177	7319628	452	811	190	0.2971639950678175	.	UGAUUACAUCUUCCGUCUAUUCCUGCUGGGC	116	8	773	0	2	7	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7321650-7322737	Cluster_1794	Pocillopora_meandrina_HIv1___Sc0000004	7321650	7322737	1088	3322	1059	0.818783865141481	+	UCGUAUAGUAUGGAUCCUCGUGCAGUGA	102	69	2921	37	36	87	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7323665-7324799	Cluster_1795	Pocillopora_meandrina_HIv1___Sc0000004	7323665	7324799	1135	11712	491	0.9951331967213115	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	3087	42	11377	123	17	23	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7445381-7445796	Cluster_1796	Pocillopora_meandrina_HIv1___Sc0000004	7445381	7445796	416	618	13	1.0	+	UUCCGGGGUCGCGGUC	525	618	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7456533-7456962	Cluster_1797	Pocillopora_meandrina_HIv1___Sc0000004	7456533	7456962	430	429	43	0.993006993006993	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	207	0	427	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7490373-7490802	Cluster_1798	Pocillopora_meandrina_HIv1___Sc0000004	7490373	7490802	430	352	76	0.9943181818181818	+	UAAGACUGUGUAACCCAAAAAGUUUGGAGU	84	34	318	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7558811-7560067	Cluster_1799	Pocillopora_meandrina_HIv1___Sc0000004	7558811	7560067	1257	4775	681	0.5019895287958115	.	UGGUAUUUUGAUUUUCUGAUCGACAAGA	768	128	4183	91	34	72	267	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7756727-7757147	Cluster_1800	Pocillopora_meandrina_HIv1___Sc0000004	7756727	7757147	421	3088	53	0.0	-	AACUUUCCGAGGUCGCGGUC	1946	3076	3	3	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7798149-7798564	Cluster_1801	Pocillopora_meandrina_HIv1___Sc0000004	7798149	7798564	416	335	24	0.9432835820895522	+	CCCUGCUAGAACCUCC	158	320	7	2	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7871307-7871723	Cluster_1802	Pocillopora_meandrina_HIv1___Sc0000004	7871307	7871723	417	447	38	0.013422818791946308	-	GACGAAUCGUGCGGCC	231	427	12	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7966694-7967111	Cluster_1803	Pocillopora_meandrina_HIv1___Sc0000004	7966694	7967111	418	150	48	0.05333333333333334	-	AACGGACAGCUGAACCAC	33	111	14	10	9	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8058190-8058941	Cluster_1804	Pocillopora_meandrina_HIv1___Sc0000004	8058190	8058941	752	833	273	0.9651860744297719	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	75	1	814	4	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8059236-8060546	Cluster_1805	Pocillopora_meandrina_HIv1___Sc0000004	8059236	8060546	1311	1635	720	0.9247706422018349	+	UAAAGUAUCAUUCCUCGUCACGAACCCG	45	12	1529	4	6	29	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8410165-8410583	Cluster_1806	Pocillopora_meandrina_HIv1___Sc0000004	8410165	8410583	419	180	106	0.8666666666666667	+	GCACAGGUUAUUUCUUACGGUGGAAUCA	22	24	112	21	7	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8677285-8678021	Cluster_1807	Pocillopora_meandrina_HIv1___Sc0000004	8677285	8678021	737	3810	593	0.9824146981627296	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	716	15	3736	3	3	14	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8679146-8680346	Cluster_1808	Pocillopora_meandrina_HIv1___Sc0000004	8679146	8680346	1201	2689	853	0.8371141688359985	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	109	38	2485	14	23	31	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8680807-8681689	Cluster_1809	Pocillopora_meandrina_HIv1___Sc0000004	8680807	8681689	883	4547	755	0.8484715196833077	+	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	655	19	4330	31	10	51	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8681891-8682918	Cluster_1810	Pocillopora_meandrina_HIv1___Sc0000004	8681891	8682918	1028	4321	953	0.8960888683175191	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	449	63	4021	20	21	76	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8682989-8683509	Cluster_1811	Pocillopora_meandrina_HIv1___Sc0000004	8682989	8683509	521	3557	510	0.5037953331459095	.	ACAAGACAGAAUUCCAGCUGAUACAGA	483	52	3217	5	41	78	164	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8684868-8685298	Cluster_1812	Pocillopora_meandrina_HIv1___Sc0000004	8684868	8685298	431	957	94	0.008359456635318705	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	547	4	936	1	1	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8686796-8688556	Cluster_1813	Pocillopora_meandrina_HIv1___Sc0000004	8686796	8688556	1761	2237	770	0.21814930710773356	.	UGUUCUAAUUUGAAAAUCUGCUUCUGUA	101	31	2063	10	5	39	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8689035-8689462	Cluster_1814	Pocillopora_meandrina_HIv1___Sc0000004	8689035	8689462	428	172	72	0.03488372093023256	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	25	4	165	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8689518-8690250	Cluster_1815	Pocillopora_meandrina_HIv1___Sc0000004	8689518	8690250	733	1116	315	0.06630824372759857	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	117	5	1062	2	5	26	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8784956-8785443	Cluster_1816	Pocillopora_meandrina_HIv1___Sc0000004	8784956	8785443	488	280	62	0.9964285714285714	+	UACAUCACUGCUGGCUGAACUAAUUUGAUU	83	5	273	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8818786-8819213	Cluster_1817	Pocillopora_meandrina_HIv1___Sc0000004	8818786	8819213	428	229	92	0.7030567685589519	.	UGCAUUCUUUCUUUUCCACUGAAAUUCC	14	3	211	1	1	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8860296-8860710	Cluster_1818	Pocillopora_meandrina_HIv1___Sc0000004	8860296	8860710	415	189	132	0.015873015873015872	-	CAGGUGGUUGACCAGUAGAGU	7	53	55	25	18	22	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8895056-8895928	Cluster_1819	Pocillopora_meandrina_HIv1___Sc0000004	8895056	8895928	873	1733	711	0.2608193883439123	.	GCAAUGGACUAGCGUGUU	57	958	395	181	60	94	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9012627-9013112	Cluster_1820	Pocillopora_meandrina_HIv1___Sc0000004	9012627	9013112	486	1168	313	0.0017123287671232876	-	CAGCUAUGAUGACAAAAGGAUU	119	247	487	91	200	47	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9015416-9015843	Cluster_1821	Pocillopora_meandrina_HIv1___Sc0000004	9015416	9015843	428	271	118	0.0036900369003690036	-	AUCUGUACUAUUGAGUACCUCUGAGCUG	20	50	164	26	23	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9027334-9027793	Cluster_1822	Pocillopora_meandrina_HIv1___Sc0000004	9027334	9027793	460	1826	559	0.0	-	CAAUGGAUAAGGCAUCUGACUGCG	41	741	643	71	136	124	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9213473-9213903	Cluster_1823	Pocillopora_meandrina_HIv1___Sc0000004	9213473	9213903	431	301	96	0.10963455149501661	-	UAGCAGAUAUAAAUCGAGCAGGUAGAUC	47	5	232	7	5	49	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9356985-9357413	Cluster_1824	Pocillopora_meandrina_HIv1___Sc0000004	9356985	9357413	429	116	45	0.9913793103448276	+	UGUGAUUGCACGUUCUAUUCUCUGUUGUAU	37	6	100	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9389236-9389665	Cluster_1825	Pocillopora_meandrina_HIv1___Sc0000004	9389236	9389665	430	273	55	0.014652014652014652	-	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	121	4	237	0	1	2	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9487258-9487685	Cluster_1826	Pocillopora_meandrina_HIv1___Sc0000004	9487258	9487685	428	185	63	1.0	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	38	0	176	0	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9619758-9620187	Cluster_1827	Pocillopora_meandrina_HIv1___Sc0000004	9619758	9620187	430	239	111	0.799163179916318	.	UGACUGAUGCAUUCUUUCUUUUCCACU	12	6	224	1	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9819034-9819448	Cluster_1828	Pocillopora_meandrina_HIv1___Sc0000004	9819034	9819448	415	115	10	0.0	-	ACGGAGAACUCUUUU	56	115	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9932247-9932676	Cluster_1829	Pocillopora_meandrina_HIv1___Sc0000004	9932247	9932676	430	233	45	0.05150214592274678	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	83	5	228	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9933800-9934300	Cluster_1830	Pocillopora_meandrina_HIv1___Sc0000004	9933800	9934300	501	510	208	0.5529411764705883	.	AGCGAUUAGAAGAGCUAGACAUCAUCGAGA	98	6	466	3	6	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9934698-9936192	Cluster_1831	Pocillopora_meandrina_HIv1___Sc0000004	9934698	9936192	1495	4111	1211	0.3677937241547069	.	UGCAUACAUAGUUCACGUAGUCUUCUGC	220	55	3620	39	51	109	237	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9936436-9937029	Cluster_1832	Pocillopora_meandrina_HIv1___Sc0000004	9936436	9937029	594	1085	273	0.07465437788018434	-	UGAAUACAUGUAUGUCUGGAAA	118	11	835	1	121	97	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9953190-9953618	Cluster_1833	Pocillopora_meandrina_HIv1___Sc0000004	9953190	9953618	429	101	22	0.9603960396039604	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	57	0	100	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9953718-9954183	Cluster_1834	Pocillopora_meandrina_HIv1___Sc0000004	9953718	9954183	466	280	87	0.9428571428571428	+	UUGGAACGUGUUGCUGAACGCUUGUUAU	76	10	234	0	5	23	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10093229-10093764	Cluster_1835	Pocillopora_meandrina_HIv1___Sc0000004	10093229	10093764	536	668	193	0.6482035928143712	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	62	21	608	6	14	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10204248-10204675	Cluster_1836	Pocillopora_meandrina_HIv1___Sc0000004	10204248	10204675	428	447	105	0.9686800894854586	+	UUGGUAAUAUUUUGCUUCUCGGCUGGCU	74	1	438	2	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10221371-10221799	Cluster_1837	Pocillopora_meandrina_HIv1___Sc0000004	10221371	10221799	429	143	47	0.9370629370629371	+	UGAGAUGUAAACUUGUGAAUCAUUAGCACA	56	4	135	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10269151-10269643	Cluster_1838	Pocillopora_meandrina_HIv1___Sc0000004	10269151	10269643	493	641	222	0.5023400936037441	.	UAUGUCAACUGUAAAUUGUCCCUUCUUU	42	14	565	12	3	19	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10271751-10272563	Cluster_1839	Pocillopora_meandrina_HIv1___Sc0000004	10271751	10272563	813	1163	201	0.01633705932932072	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	150	8	1058	1	1	70	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10318379-10319161	Cluster_1840	Pocillopora_meandrina_HIv1___Sc0000004	10318379	10319161	783	796	206	0.8253768844221105	+	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	192	11	775	1	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10656026-10656455	Cluster_1841	Pocillopora_meandrina_HIv1___Sc0000004	10656026	10656455	430	216	67	0.18055555555555555	-	AUACUGAAAAACUUAAGUUACCAGAGCGUU	65	2	213	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10678089-10678495	Cluster_1842	Pocillopora_meandrina_HIv1___Sc0000004	10678089	10678495	407	147	68	1.0	+	UGAGUGUGCUUGUUGACUUCUGCUUGC	8	0	147	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10712608-10713456	Cluster_1843	Pocillopora_meandrina_HIv1___Sc0000004	10712608	10713456	849	776	242	0.10309278350515463	-	UUGGAUAAUUUUGACGAAACCAGAGACA	173	6	725	0	11	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10713721-10714264	Cluster_1844	Pocillopora_meandrina_HIv1___Sc0000004	10713721	10714264	544	348	149	0.9224137931034483	+	AGUUUGCUGAUUUCCUGGUGCUUUGCGA	32	9	296	2	3	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10714677-10715682	Cluster_1845	Pocillopora_meandrina_HIv1___Sc0000004	10714677	10715682	1006	1320	425	0.7037878787878787	.	AGCAUACUCGAAGAACUGCAAGUUAAUGG	112	138	1100	7	15	22	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10715764-10716485	Cluster_1846	Pocillopora_meandrina_HIv1___Sc0000004	10715764	10716485	722	629	322	0.14308426073131955	-	UCUCUUUUGUUGCUUGUAAAUUUAUGCA	37	16	582	3	0	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10716754-10717336	Cluster_1847	Pocillopora_meandrina_HIv1___Sc0000004	10716754	10717336	583	661	205	0.7443267776096822	.	AAGUUCAAGAUGGAUUUCAGGGCCAGAGU	88	13	615	1	2	4	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10718644-10719421	Cluster_1848	Pocillopora_meandrina_HIv1___Sc0000004	10718644	10719421	778	518	184	0.20270270270270271	.	UGUGUUCGUUGAAUGGCUCCCCAUGCG	81	93	387	27	8	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10869965-10870513	Cluster_1849	Pocillopora_meandrina_HIv1___Sc0000004	10869965	10870513	549	2067	517	0.0004837929366231253	-	UUGCACAGUCGGCACCGAGCAUGGC	415	379	1168	217	100	75	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10878018-10878448	Cluster_1850	Pocillopora_meandrina_HIv1___Sc0000004	10878018	10878448	431	740	227	0.022972972972972974	-	UGACUGACUGUGCUUGUGUACGAUACACGAC	67	5	714	1	5	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10878954-10879379	Cluster_1851	Pocillopora_meandrina_HIv1___Sc0000004	10878954	10879379	426	111	42	0.036036036036036036	-	UGUGUAGAUAUGUCUUUUGGACAGGA	35	0	110	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10921434-10921848	Cluster_1852	Pocillopora_meandrina_HIv1___Sc0000004	10921434	10921848	415	161	54	0.9937888198757764	+	CUCCUGACUGGCGCU	95	122	26	5	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10924989-10925417	Cluster_1853	Pocillopora_meandrina_HIv1___Sc0000004	10924989	10925417	429	362	35	0.930939226519337	+	UGUGAUGUAGAUUGCAACAUUUCGACUGC	133	11	337	7	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11040418-11041018	Cluster_1854	Pocillopora_meandrina_HIv1___Sc0000004	11040418	11041018	601	3203	219	0.09116453325007805	-	UAGGUGAACCUUGCAAGUGGAUCUUUUGU	450	183	2694	16	31	41	238	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11044366-11044795	Cluster_1855	Pocillopora_meandrina_HIv1___Sc0000004	11044366	11044795	430	153	45	0.006535947712418301	-	UCCGUGUGUUUGUUUGGAACAUAUUUACUC	35	9	142	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11338424-11338854	Cluster_1856	Pocillopora_meandrina_HIv1___Sc0000004	11338424	11338854	431	150	58	0.04	-	UGUUUACUUUCUUUACAACUUCGGAUACGGG	36	1	145	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11359230-11359639	Cluster_1857	Pocillopora_meandrina_HIv1___Sc0000004	11359230	11359639	410	124	34	0.4596774193548387	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	33	2	122	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11406097-11406512	Cluster_1858	Pocillopora_meandrina_HIv1___Sc0000004	11406097	11406512	416	195	54	0.958974358974359	+	UGUAUCCCAACCAAGU	116	122	66	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11493874-11494298	Cluster_1859	Pocillopora_meandrina_HIv1___Sc0000004	11493874	11494298	425	143	77	0.8881118881118881	+	UGAGUUGCUGCUUUGGACGAAAUUUCGA	26	0	116	9	4	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11495868-11496292	Cluster_1860	Pocillopora_meandrina_HIv1___Sc0000004	11495868	11496292	425	164	34	0.06097560975609756	-	AAUUGUGAUUUUGUUCAUUGAAUUUAG	37	1	153	1	0	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11497691-11498133	Cluster_1861	Pocillopora_meandrina_HIv1___Sc0000004	11497691	11498133	443	1033	100	0.9990319457889641	+	UGAGACUUUGAUUUUAACUGCUCUAAAAUGC	515	0	1025	1	6	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11655863-11656425	Cluster_1862	Pocillopora_meandrina_HIv1___Sc0000004	11655863	11656425	563	5529	595	0.0019895098571170193	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1211	46	5449	2	11	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11656449-11658502	Cluster_1863	Pocillopora_meandrina_HIv1___Sc0000004	11656449	11658502	2054	5383	1735	0.019320081738807355	-	UCCGAUCUGUUUUCAAGGUUUUGACCACA	276	42	5099	39	31	62	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11732494-11732971	Cluster_1864	Pocillopora_meandrina_HIv1___Sc0000004	11732494	11732971	478	443	162	0.9209932279909706	+	UGAGUUGCUGCUUUGGACGAAAUUUCGA	56	7	405	8	1	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11736311-11736752	Cluster_1865	Pocillopora_meandrina_HIv1___Sc0000004	11736311	11736752	442	1025	100	0.9931707317073171	+	UGAGACUUUGAUUUUAACUGCUCUAAAAUGC	539	4	1009	4	6	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11903606-11904022	Cluster_1866	Pocillopora_meandrina_HIv1___Sc0000004	11903606	11904022	417	168	12	0.0	-	CGGCCUGAAAAAAAAAA	128	165	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11950722-11951692	Cluster_1867	Pocillopora_meandrina_HIv1___Sc0000004	11950722	11951692	971	9902	1406	0.6566350232276308	.	UGCAAUCACAAUGAGCAGACAGAACUUUGC	687	226	8636	136	174	379	351	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12450173-12450798	Cluster_1868	Pocillopora_meandrina_HIv1___Sc0000004	12450173	12450798	626	542	282	0.6771217712177122	.	CUGUCUCUUAGAACACACGCCUGG	26	14	407	8	11	17	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12500684-12501113	Cluster_1869	Pocillopora_meandrina_HIv1___Sc0000004	12500684	12501113	430	376	75	0.7872340425531915	.	UAAGAUCUGAUACAUUCUUUGGCGGUGGUC	86	0	364	1	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12699316-12699741	Cluster_1870	Pocillopora_meandrina_HIv1___Sc0000004	12699316	12699741	426	138	57	0.036231884057971016	-	UGUUUACUUUCUUUACAACUUCGGAUACGGG	23	2	132	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12810680-12811100	Cluster_1871	Pocillopora_meandrina_HIv1___Sc0000004	12810680	12811100	421	91	37	0.04395604395604396	-	UGAACCGUGCCGAUCUGCUGCCCUUUGAC	18	3	86	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12850438-12850856	Cluster_1872	Pocillopora_meandrina_HIv1___Sc0000004	12850438	12850856	419	241	138	0.983402489626556	+	UUAUUCAUUUUACUUCUCCUUC	13	79	69	26	33	25	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12885677-12886106	Cluster_1873	Pocillopora_meandrina_HIv1___Sc0000004	12885677	12886106	430	171	28	0.0	-	UCAACAGCCUGAACUUGUCUUCACAAGACU	47	0	169	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13474929-13475385	Cluster_1874	Pocillopora_meandrina_HIv1___Sc0000004	13474929	13475385	457	590	173	0.9305084745762712	+	UGUUCUCUAUCAGGUACACGGACAGGAU	38	19	548	0	6	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13494281-13494708	Cluster_1875	Pocillopora_meandrina_HIv1___Sc0000004	13494281	13494708	428	179	42	0.994413407821229	+	UGGACGGUUCAACUCCGAGACUUUGC	40	5	174	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13496622-13497814	Cluster_1876	Pocillopora_meandrina_HIv1___Sc0000004	13496622	13497814	1193	3231	882	0.2380068090374497	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	565	34	2892	14	150	50	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13499231-13501217	Cluster_1877	Pocillopora_meandrina_HIv1___Sc0000004	13499231	13501217	1987	4800	1487	0.774375	.	UUACGAAAUAUCUGAUGGCUGAUC	257	88	4024	31	30	166	461	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13564133-13565479	Cluster_1878	Pocillopora_meandrina_HIv1___Sc0000004	13564133	13565479	1347	31027	2316	0.9919425016920747	+	UUGGAAUGUGUUACUGAAUGCUUGUUACA	2487	653	29832	57	127	211	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13565829-13566247	Cluster_1879	Pocillopora_meandrina_HIv1___Sc0000004	13565829	13566247	419	172	75	0.9941860465116279	+	UCUGGUACAUUUCAUAAAUCUGUGGUCUCC	33	8	153	1	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13566431-13567156	Cluster_1880	Pocillopora_meandrina_HIv1___Sc0000004	13566431	13567156	726	753	258	0.99867197875166	+	UUUUAUCUUGAGCAUACACUUAUCUACUGU	56	6	703	4	9	23	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13567324-13567893	Cluster_1881	Pocillopora_meandrina_HIv1___Sc0000004	13567324	13567893	570	4071	631	0.6440677966101694	.	UACGUCUGGCCAGCAAUCAACAUCGUC	571	82	3551	62	49	119	208	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13569155-13569583	Cluster_1882	Pocillopora_meandrina_HIv1___Sc0000004	13569155	13569583	429	463	127	0.9676025917926566	+	UGUAGAAUCAAUCUGUUACUAAGACACC	105	4	438	4	0	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13572742-13576253	Cluster_1883	Pocillopora_meandrina_HIv1___Sc0000004	13572742	13576253	3512	11762	2488	0.9771297398401633	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1479	123	11237	37	91	136	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13577716-13578146	Cluster_1884	Pocillopora_meandrina_HIv1___Sc0000004	13577716	13578146	431	277	83	0.9891696750902527	+	UGCUCUUCAUUUUUGUUGUUGGUUGAACAC	94	8	265	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13579375-13579803	Cluster_1885	Pocillopora_meandrina_HIv1___Sc0000004	13579375	13579803	429	199	84	1.0	+	UAAGCUGUGUUUCCUGAUCUGUUAAAUUGC	25	7	188	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13581537-13581964	Cluster_1886	Pocillopora_meandrina_HIv1___Sc0000004	13581537	13581964	428	237	101	0.9662447257383966	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	66	0	234	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13582131-13582618	Cluster_1887	Pocillopora_meandrina_HIv1___Sc0000004	13582131	13582618	488	607	173	0.828665568369028	+	UGCGAUCCAAAGUAGAAGAAAAUUUAUU	61	3	559	4	3	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13583661-13584178	Cluster_1888	Pocillopora_meandrina_HIv1___Sc0000004	13583661	13584178	518	5670	390	0.9994708994708995	+	UAUCUUUGCCAGUUCUGACGUACUCGCAC	990	58	5565	4	10	22	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13587138-13587564	Cluster_1889	Pocillopora_meandrina_HIv1___Sc0000004	13587138	13587564	427	128	48	0.984375	+	UGUUAUCACCAGGCCUUGCACGACAUCUGC	39	8	115	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13590591-13591013	Cluster_1890	Pocillopora_meandrina_HIv1___Sc0000004	13590591	13591013	423	223	120	0.9775784753363229	+	UACUGUUUGAAACCGGCUUGUUUACUCA	21	6	211	2	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13591093-13591519	Cluster_1891	Pocillopora_meandrina_HIv1___Sc0000004	13591093	13591519	427	173	70	0.9364161849710982	+	UGCUCGACCUUUGCAACACCAAUUUGUUU	33	9	162	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13592684-13593096	Cluster_1892	Pocillopora_meandrina_HIv1___Sc0000004	13592684	13593096	413	184	103	0.8913043478260869	+	UGAGUAUGUCGCGCUCCGUCCUGACGAAG	26	14	161	5	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13595554-13595969	Cluster_1893	Pocillopora_meandrina_HIv1___Sc0000004	13595554	13595969	416	194	83	0.8402061855670103	+	GGUUUCGUAGUGUAGG	49	159	8	19	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13597761-13598280	Cluster_1894	Pocillopora_meandrina_HIv1___Sc0000004	13597761	13598280	520	236	108	0.9957627118644068	+	UGGACUUUAAACUGCAGAUCUGAUUGUUUC	12	7	201	1	10	15	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13598565-13599174	Cluster_1895	Pocillopora_meandrina_HIv1___Sc0000004	13598565	13599174	610	558	231	0.989247311827957	+	UUGGAUUUUUGUGUGGUUGAGACCAAGACA	80	8	532	3	1	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13599546-13600020	Cluster_1896	Pocillopora_meandrina_HIv1___Sc0000004	13599546	13600020	475	337	152	0.9762611275964391	+	UAUGAUCACGUUGUUCCUCUUGGACCUG	24	3	326	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13600817-13601256	Cluster_1897	Pocillopora_meandrina_HIv1___Sc0000004	13600817	13601256	440	378	131	1.0	+	UCCAUUUCCUGUAGCAAAAUUAAGCUGG	49	7	358	1	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13602742-13603145	Cluster_1898	Pocillopora_meandrina_HIv1___Sc0000004	13602742	13603145	404	191	104	0.9947643979057592	+	UGAAAUCUUGAGGGUCAUGUCUGAUACUG	17	7	179	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13603945-13604523	Cluster_1899	Pocillopora_meandrina_HIv1___Sc0000004	13603945	13604523	579	423	208	0.9952718676122931	+	UGAAUUCCACAAGUGCCUGUAAGAAGUGGC	24	11	390	5	6	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13606418-13606901	Cluster_1900	Pocillopora_meandrina_HIv1___Sc0000004	13606418	13606901	484	538	166	0.9572490706319703	+	UUAUCAGUAUCUUCAAAGUUUGUCAUCAAG	96	11	518	2	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13608300-13608970	Cluster_1901	Pocillopora_meandrina_HIv1___Sc0000004	13608300	13608970	671	384	182	0.328125	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	38	38	307	10	16	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13613398-13614371	Cluster_1902	Pocillopora_meandrina_HIv1___Sc0000004	13613398	13614371	974	1010	270	0.9702970297029703	+	UAUCGCUAUGAAUAUUUGAAACGUUUUUCAU	98	7	990	2	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13617466-13617894	Cluster_1903	Pocillopora_meandrina_HIv1___Sc0000004	13617466	13617894	429	318	121	0.9371069182389937	+	UACGUGUAGAAAGCCUUCUCUGACAUC	32	1	300	2	2	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13618974-13619528	Cluster_1904	Pocillopora_meandrina_HIv1___Sc0000004	13618974	13619528	555	613	300	0.8988580750407831	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	49	5	584	2	4	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13620022-13620730	Cluster_1905	Pocillopora_meandrina_HIv1___Sc0000004	13620022	13620730	709	10995	618	0.9929058663028649	+	UUAAAGGGGAAGACAAUACAUCUGUGUGA	2173	37	10895	4	3	19	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13621027-13621760	Cluster_1906	Pocillopora_meandrina_HIv1___Sc0000004	13621027	13621760	734	10338	1071	0.973399110079319	+	UGUGACAGCUCCUUUCCUCUUGCAAAG	903	146	9082	772	117	66	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13636486-13637031	Cluster_1907	Pocillopora_meandrina_HIv1___Sc0000004	13636486	13637031	546	806	192	0.8970223325062034	+	UUGGAAAAAUCUGCUGUAAUUUGCUGC	247	4	765	1	5	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13638188-13638612	Cluster_1908	Pocillopora_meandrina_HIv1___Sc0000004	13638188	13638612	425	93	32	0.20430107526881722	.	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	53	6	85	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13638673-13639096	Cluster_1909	Pocillopora_meandrina_HIv1___Sc0000004	13638673	13639096	424	240	126	1.0	+	UGCAAUGUUUUUCGGCGUGUUGGGACGGU	19	7	229	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13639479-13639907	Cluster_1910	Pocillopora_meandrina_HIv1___Sc0000004	13639479	13639907	429	365	108	0.9452054794520548	+	UUCGAGCUAUCACUGAAAGAGGGAGUGGU	68	4	340	3	6	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13641818-13642304	Cluster_1911	Pocillopora_meandrina_HIv1___Sc0000004	13641818	13642304	487	666	167	0.8153153153153153	+	UUCUGCUUGCACCGUGACUCUGCAUGGC	91	4	620	3	2	13	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13642615-13644807	Cluster_1912	Pocillopora_meandrina_HIv1___Sc0000004	13642615	13644807	2193	23443	2862	0.9623768289041504	+	UAGCGUAUUACAGAAAAAAGAAAACAGAGU	1352	260	22164	261	132	203	423	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13646347-13646766	Cluster_1913	Pocillopora_meandrina_HIv1___Sc0000004	13646347	13646766	420	185	94	0.9945945945945946	+	UGUUGUGUUCUUCAUCUGAUGUAUCGUC	20	8	169	0	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13648557-13648986	Cluster_1914	Pocillopora_meandrina_HIv1___Sc0000004	13648557	13648986	430	144	23	1.0	+	UUGACGACUUGUAACUUAAACUUGAAUAUU	100	1	142	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13659908-13661038	Cluster_1915	Pocillopora_meandrina_HIv1___Sc0000004	13659908	13661038	1131	1343	451	0.827252419955324	+	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	99	14	1247	1	6	27	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13664298-13664728	Cluster_1916	Pocillopora_meandrina_HIv1___Sc0000004	13664298	13664728	431	227	49	0.9911894273127754	+	UUGGAACACUACAAGACUACUGAGCUCUUGU	97	3	224	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13665700-13666634	Cluster_1917	Pocillopora_meandrina_HIv1___Sc0000004	13665700	13666634	935	1662	264	0.9957882069795427	+	UUUGUUGUGUUUUUUGAUCGUGGGCAUC	332	7	1643	1	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13667018-13667446	Cluster_1918	Pocillopora_meandrina_HIv1___Sc0000004	13667018	13667446	429	356	117	0.9943820224719101	+	UGUAACAAAGAAGUACUACUGAUCACAUU	50	2	347	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13669366-13671177	Cluster_1919	Pocillopora_meandrina_HIv1___Sc0000004	13669366	13671177	1812	8673	1524	0.9200968523002422	+	UGUAACUUUGAGCUUCUUUUUUGCAGGA	1358	79	8302	27	41	91	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13673694-13674124	Cluster_1920	Pocillopora_meandrina_HIv1___Sc0000004	13673694	13674124	431	238	91	0.9831932773109243	+	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	47	1	229	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13674660-13675102	Cluster_1921	Pocillopora_meandrina_HIv1___Sc0000004	13674660	13675102	443	447	181	0.9463087248322147	+	UAAAGUCUGUGUCAUUUUGAAGGAACGUGU	36	1	422	1	4	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13684665-13685572	Cluster_1922	Pocillopora_meandrina_HIv1___Sc0000004	13684665	13685572	908	1652	529	0.9939467312348669	+	UAAGACAAGUACUUCAAACACUCUCUAGUAG	138	13	1585	10	10	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13685594-13686075	Cluster_1923	Pocillopora_meandrina_HIv1___Sc0000004	13685594	13686075	482	431	226	0.9698375870069605	+	UGAUUUUUGUUCUUUUUGUUGAGGCUGCAA	26	2	414	0	1	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13686369-13687756	Cluster_1924	Pocillopora_meandrina_HIv1___Sc0000004	13686369	13687756	1388	5252	1022	0.9918126428027418	+	UUGUAACUGCGAUCGUUCUUUGGAGC	319	28	4874	17	116	132	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13694373-13695079	Cluster_1925	Pocillopora_meandrina_HIv1___Sc0000004	13694373	13695079	707	540	217	0.9703703703703703	+	UAGGCUCGUGUGCACAACAACUGUACAGC	26	6	522	0	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13698678-13699095	Cluster_1926	Pocillopora_meandrina_HIv1___Sc0000004	13698678	13699095	418	308	54	1.0	+	AUCCCACUCCUGACACCA	104	285	21	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13700023-13700732	Cluster_1927	Pocillopora_meandrina_HIv1___Sc0000004	13700023	13700732	710	738	108	0.9986449864498645	+	UGAAUGCUCGUUGCUCGACUGAUUGUAC	95	6	725	2	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13727111-13727724	Cluster_1928	Pocillopora_meandrina_HIv1___Sc0000004	13727111	13727724	614	639	225	0.701095461658842	.	UUCGGCAAAAACUAAAAGCGGGCGAAGA	161	2	594	5	2	9	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13999967-14000673	Cluster_1929	Pocillopora_meandrina_HIv1___Sc0000004	13999967	14000673	707	277	94	0.11913357400722022	-	UGAUGCAAUCUGUUUCUGCAUGAGGGCUGC	47	4	251	4	5	12	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14003220-14003636	Cluster_1930	Pocillopora_meandrina_HIv1___Sc0000004	14003220	14003636	417	255	21	0.00784313725490196	-	CGGCCUGAAAAAAAAAA	192	245	2	2	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14004713-14005502	Cluster_1931	Pocillopora_meandrina_HIv1___Sc0000004	14004713	14005502	790	1774	303	0.9503945885005637	+	UUUGAUAUAAAGGUUGUGGAAAAACAGU	163	14	1698	8	4	21	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14017575-14018002	Cluster_1932	Pocillopora_meandrina_HIv1___Sc0000004	14017575	14018002	428	99	14	0.98989898989899	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	0	98	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14021015-14021442	Cluster_1933	Pocillopora_meandrina_HIv1___Sc0000004	14021015	14021442	428	120	32	0.23333333333333334	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	51	5	112	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14041691-14042119	Cluster_1934	Pocillopora_meandrina_HIv1___Sc0000004	14041691	14042119	429	102	25	0.0196078431372549	-	UGAGUUCUACUGUAACGACUGAAUAGACU	38	2	97	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14102640-14104377	Cluster_1935	Pocillopora_meandrina_HIv1___Sc0000004	14102640	14104377	1738	6864	1459	0.028554778554778556	-	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	886	54	6612	16	30	80	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14111260-14111688	Cluster_1936	Pocillopora_meandrina_HIv1___Sc0000004	14111260	14111688	429	760	145	0.9539473684210527	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	263	3	748	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14385956-14386385	Cluster_1937	Pocillopora_meandrina_HIv1___Sc0000004	14385956	14386385	430	1214	65	0.0016474464579901153	-	GGGGUGGACUGUGUUCCAGAAAAGACUGG	341	85	976	6	137	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14397922-14398333	Cluster_1938	Pocillopora_meandrina_HIv1___Sc0000004	14397922	14398333	412	133	59	0.9849624060150376	+	UGAAACCGAAGACCUGCUAGUAUUUUUGC	36	7	125	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14404374-14404780	Cluster_1939	Pocillopora_meandrina_HIv1___Sc0000004	14404374	14404780	407	102	30	0.9215686274509803	+	UACGUCUAAAGGAUCUGAAUAUUCAUCAUC	26	9	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14405011-14406005	Cluster_1940	Pocillopora_meandrina_HIv1___Sc0000004	14405011	14406005	995	1081	514	0.6318223866790009	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	66	15	939	13	17	27	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14407137-14407739	Cluster_1941	Pocillopora_meandrina_HIv1___Sc0000004	14407137	14407739	603	554	245	0.16606498194945848	-	UUCCUGCACCAUUGCAUGUUAACUUCUGC	69	8	488	3	2	7	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14411244-14411670	Cluster_1942	Pocillopora_meandrina_HIv1___Sc0000004	14411244	14411670	427	239	114	0.99581589958159	+	UGCUUUCUUGGUCUAGGGUUACUCACU	30	8	230	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14426820-14427248	Cluster_1943	Pocillopora_meandrina_HIv1___Sc0000004	14426820	14427248	429	154	44	0.9935064935064936	+	UGUUUACUGGUGACUGAAGGAGAACUGGU	69	4	148	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14428694-14429346	Cluster_1944	Pocillopora_meandrina_HIv1___Sc0000004	14428694	14429346	653	571	208	0.9947460595446584	+	UGUCAGAACUGUCUUCGCUUGUAGAAAC	52	11	551	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14456143-14456570	Cluster_1945	Pocillopora_meandrina_HIv1___Sc0000004	14456143	14456570	428	135	40	0.9407407407407408	+	AGAGUACCCCAAAACCGCCUGACUAGUUGC	33	6	113	3	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14459119-14459655	Cluster_1946	Pocillopora_meandrina_HIv1___Sc0000004	14459119	14459655	537	442	152	0.9705882352941176	+	UUUCUCUUCUGAAUGUUGAUUAUAAUAUUUC	43	36	355	22	4	4	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14482156-14482583	Cluster_1947	Pocillopora_meandrina_HIv1___Sc0000004	14482156	14482583	428	185	80	0.021621621621621623	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	30	7	173	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14507848-14509086	Cluster_1948	Pocillopora_meandrina_HIv1___Sc0000004	14507848	14509086	1239	13841	1401	0.940394480167618	+	UUUUAACACUCUUGACUGCAUCUUUGC	1868	58	13094	17	24	69	579	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14517602-14518021	Cluster_1949	Pocillopora_meandrina_HIv1___Sc0000004	14517602	14518021	420	186	33	0.0	-	CAUGGGUUGGAUUAGGUCUG	24	125	4	20	27	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14564791-14565387	Cluster_1950	Pocillopora_meandrina_HIv1___Sc0000004	14564791	14565387	597	816	435	0.3174019607843137	.	UUAAAAAGACGAGCUCGACG	33	437	36	261	51	26	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14565484-14565919	Cluster_1951	Pocillopora_meandrina_HIv1___Sc0000004	14565484	14565919	436	335	159	0.008955223880597015	-	CAAGUGUAGUAUCUGUUCC	39	119	159	5	16	22	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14566036-14566562	Cluster_1952	Pocillopora_meandrina_HIv1___Sc0000004	14566036	14566562	527	75402	2402	0.9999336887615713	+	CCCCGUGUUGUAGGCUU	8661	40752	18146	1835	3248	6663	4758	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14567165-14567722	Cluster_1953	Pocillopora_meandrina_HIv1___Sc0000004	14567165	14567722	558	2284	693	0.0021891418563922942	-	CGUUCGCGCUCGUCCCCGC	464	1405	314	219	194	110	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14578808-14579344	Cluster_1954	Pocillopora_meandrina_HIv1___Sc0000004	14578808	14579344	537	18414	2318	0.0008689040947105464	-	AAACUGAUUUUUGGAACUGGGCU	531	3232	9541	774	1392	1964	1511	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:31376-31900	Cluster_1955	Pocillopora_meandrina_HIv1___Sc0000005	31376	31900	525	5026	817	0.017906884202148827	-	AUAAGGACGAGAAAAGUCUUCGGACU	468	1382	2575	230	169	279	391	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:195248-196690	Cluster_1956	Pocillopora_meandrina_HIv1___Sc0000005	195248	196690	1443	1945	824	0.954241645244216	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	52	20	1803	9	27	26	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:246548-247012	Cluster_1957	Pocillopora_meandrina_HIv1___Sc0000005	246548	247012	465	698	275	0.0057306590257879654	-	ACGCAUGUCAAAUGAGAAGUAACAAGAC	125	60	477	32	33	28	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:356378-356805	Cluster_1958	Pocillopora_meandrina_HIv1___Sc0000005	356378	356805	428	255	140	0.8705882352941177	+	UAAAUCUCGCGGCUCCAAUGUGAAUGUC	13	8	234	1	2	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:361424-361859	Cluster_1959	Pocillopora_meandrina_HIv1___Sc0000005	361424	361859	436	214	80	0.056074766355140186	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	42	0	201	1	0	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:363137-363572	Cluster_1960	Pocillopora_meandrina_HIv1___Sc0000005	363137	363572	436	779	242	0.05006418485237484	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	137	5	745	0	5	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:363915-364343	Cluster_1961	Pocillopora_meandrina_HIv1___Sc0000005	363915	364343	429	694	189	0.020172910662824207	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	173	1	680	0	4	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:409567-409984	Cluster_1962	Pocillopora_meandrina_HIv1___Sc0000005	409567	409984	418	844	56	0.04383886255924171	-	UUCCGAGGUCGCGAUC	282	820	16	3	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:601572-601666	Cluster_1963	Pocillopora_meandrina_HIv1___Sc0000005	601572	601666	95	132723	489	0.9999924655108761	+	AAAGAAGUACAAGUGGUAGGG	42404	45039	6	66816	20627	230	5	N	Y	spi-mir-temp-4_Stylophora_pistillata_Liew_et_al._2014_Exact_match_of_nve-miR-2023.;apa-mir-2023_Exaiptasia_pallida_Baumgarten_et_al._2017_miR-2023;_Nve;_Spis;_Adi;Adi-Mir-2023_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2023-3p;_nve-miR-2023-3p;_spi-miR-temp-4;eca-nve-F-miR-2023_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;mse-nve-F-miR-2023_Metridium_senile_Praher_et_al._2021_Transcriptome-level;sca-nve-miR-2023-3p_Scolanthus_callimorphus_Praher_et_al._2021_Transcriptome-level;ami-nve-F-miR-2023-3p_Acropora_millepora_Praher_et_al._2021_NA;epa-nve-F-miR-2023_Exaiptasia_pallida_Praher_et_al._2021_NA;spi-nve-F-miR-2023_Stylophora_pistillata_Praher_et_al._2021_NA;miR-2023_Nematostella_vectensis_Moran_et_al._2014_NA;avi-miR-temp-2023_Anemonia_viridis_Urbarova_et_al._2018_NA
Pocillopora_meandrina_HIv1___Sc0000005:669644-670065	Cluster_1964	Pocillopora_meandrina_HIv1___Sc0000005	669644	670065	422	89	33	0.02247191011235955	-	UUUCUUGAUCAAUUUGUGAAUGUCUGCA	12	2	83	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:677665-678093	Cluster_1965	Pocillopora_meandrina_HIv1___Sc0000005	677665	678093	429	278	81	0.0035971223021582736	-	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	83	6	267	2	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:678163-679515	Cluster_1966	Pocillopora_meandrina_HIv1___Sc0000005	678163	679515	1353	3839	593	0.0023443605105496223	-	UGAUUAAAAGUUCUGUUAAAUUAUCUGAU	690	18	3764	11	10	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:739031-739446	Cluster_1967	Pocillopora_meandrina_HIv1___Sc0000005	739031	739446	416	280	8	0.0035714285714285713	-	CCCUCCGGUGCCUCCA	122	280	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:855676-856093	Cluster_1968	Pocillopora_meandrina_HIv1___Sc0000005	855676	856093	418	218	23	0.9862385321100917	+	CGGCCUGAAAAAAAAAA	73	198	1	13	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:928036-928463	Cluster_1969	Pocillopora_meandrina_HIv1___Sc0000005	928036	928463	428	425	271	0.9835294117647059	+	CAGUAGCUGAACUCUCAUAUGAGCACGU	17	93	223	26	18	31	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1070194-1070609	Cluster_1970	Pocillopora_meandrina_HIv1___Sc0000005	1070194	1070609	416	109	7	0.01834862385321101	-	CGAUCUGGCUGCGACA	84	108	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1117149-1117569	Cluster_1971	Pocillopora_meandrina_HIv1___Sc0000005	1117149	1117569	421	128	37	0.921875	+	UUUCGUGCUCUAGCCGCUUCA	62	15	6	91	15	1	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1318572-1318986	Cluster_1972	Pocillopora_meandrina_HIv1___Sc0000005	1318572	1318986	415	221	99	0.9773755656108597	+	CCGUGGUGGACUGCC	67	147	39	11	12	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1395499-1395914	Cluster_1973	Pocillopora_meandrina_HIv1___Sc0000005	1395499	1395914	416	137	15	1.0	+	CUAGUACUGUGAAACU	79	137	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1509568-1509998	Cluster_1974	Pocillopora_meandrina_HIv1___Sc0000005	1509568	1509998	431	306	140	0.042483660130718956	-	UGAUAACUGUACUCUUGAAAUUCAUCGA	22	6	289	3	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1510020-1510441	Cluster_1975	Pocillopora_meandrina_HIv1___Sc0000005	1510020	1510441	422	225	136	0.15555555555555556	-	UACUGAUAGUGAAACUGCUCCUUGAACC	13	5	213	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1513098-1513526	Cluster_1976	Pocillopora_meandrina_HIv1___Sc0000005	1513098	1513526	429	87	26	0.011494252873563218	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	27	1	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1529876-1530290	Cluster_1977	Pocillopora_meandrina_HIv1___Sc0000005	1529876	1530290	415	79	11	1.0	+	GUACUGACCUAGGGGACGG	33	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1649459-1649875	Cluster_1978	Pocillopora_meandrina_HIv1___Sc0000005	1649459	1649875	417	107	24	0.0	-	GAGGAAAAGAAACUAACA	39	102	0	5	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1674152-1674566	Cluster_1979	Pocillopora_meandrina_HIv1___Sc0000005	1674152	1674566	415	81	2	0.0	-	CGGCUUGAAAAAAAAA	71	81	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1729006-1729479	Cluster_1980	Pocillopora_meandrina_HIv1___Sc0000005	1729006	1729479	474	575	172	0.04173913043478261	-	UCCUAUGGUCGAUGCCUUCUGAGACAGU	58	14	537	6	3	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1882006-1882421	Cluster_1981	Pocillopora_meandrina_HIv1___Sc0000005	1882006	1882421	416	850	74	0.8670588235294118	+	GAGACUUGAAGCGGC	581	809	26	2	5	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1883318-1883719	Cluster_1982	Pocillopora_meandrina_HIv1___Sc0000005	1883318	1883719	402	206	163	0.0	-	GAUGACUGGGUUGUAACU	7	86	64	23	13	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1897568-1898404	Cluster_1983	Pocillopora_meandrina_HIv1___Sc0000005	1897568	1898404	837	761	447	0.002628120893561104	-	GUGACUGCAGCAGAGU	41	444	200	37	38	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1899461-1900300	Cluster_1984	Pocillopora_meandrina_HIv1___Sc0000005	1899461	1900300	840	636	388	0.006289308176100629	-	CUCUGGAUCGGAGUGACA	26	275	208	57	37	32	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2220365-2220780	Cluster_1985	Pocillopora_meandrina_HIv1___Sc0000005	2220365	2220780	416	199	17	0.01507537688442211	-	UUGUUCUAAGAUUUGA	47	199	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2281461-2281910	Cluster_1986	Pocillopora_meandrina_HIv1___Sc0000005	2281461	2281910	450	921	200	0.9869706840390879	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	335	77	800	14	14	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2310589-2311018	Cluster_1987	Pocillopora_meandrina_HIv1___Sc0000005	2310589	2311018	430	396	162	0.0	-	UACUACGGUUGCUGAAA	37	168	163	20	17	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2352438-2352864	Cluster_1988	Pocillopora_meandrina_HIv1___Sc0000005	2352438	2352864	427	119	46	0.0	-	UUUUCCUGGGCUCGCAGCUUUCUCUGUU	12	1	114	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2391497-2391925	Cluster_1989	Pocillopora_meandrina_HIv1___Sc0000005	2391497	2391925	429	181	73	0.994475138121547	+	AGGACAAACAAGACCUGAAACGGAAAGGA	41	15	153	2	5	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2565710-2566118	Cluster_1990	Pocillopora_meandrina_HIv1___Sc0000005	2565710	2566118	409	74	14	1.0	+	CUCGGCCGUGGAUUGGU	34	74	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2579073-2579493	Cluster_1991	Pocillopora_meandrina_HIv1___Sc0000005	2579073	2579493	421	152	85	0.8947368421052632	+	UACGUUCGUCUUGAGACAUCUCUGUCUUA	8	4	140	3	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2716945-2717358	Cluster_1992	Pocillopora_meandrina_HIv1___Sc0000005	2716945	2717358	414	105	30	0.8095238095238095	+	UUGCUACGAUCUUCA	25	91	10	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2776669-2777096	Cluster_1993	Pocillopora_meandrina_HIv1___Sc0000005	2776669	2777096	428	523	71	0.9980879541108987	+	AGCCAACGUGACCACAAACAAAGACGAC	135	1	511	6	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2785318-2785746	Cluster_1994	Pocillopora_meandrina_HIv1___Sc0000005	2785318	2785746	429	275	113	0.16363636363636364	-	UGUCUUCACGAAUCUGCAGUUGAAAUUUC	67	12	213	7	13	25	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2843759-2844187	Cluster_1995	Pocillopora_meandrina_HIv1___Sc0000005	2843759	2844187	429	528	70	0.9962121212121212	+	AGCCAACGUGACCACAAACAAAGACGAC	142	0	504	6	3	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2976195-2976612	Cluster_1996	Pocillopora_meandrina_HIv1___Sc0000005	2976195	2976612	418	2417	39	1.0	+	UUAGGGUGCUGUCGGCA	704	2417	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3206372-3206794	Cluster_1997	Pocillopora_meandrina_HIv1___Sc0000005	3206372	3206794	423	82	32	0.012195121951219513	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	31	1	79	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3377636-3378054	Cluster_1998	Pocillopora_meandrina_HIv1___Sc0000005	3377636	3378054	419	155	15	0.9870967741935484	+	CAGCGGAACCUUAGGAUCUG	52	143	0	9	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3564984-3565412	Cluster_1999	Pocillopora_meandrina_HIv1___Sc0000005	3564984	3565412	429	1586	128	0.9823455233291298	+	UACUAAGUAGGUACCUUCGAGAUGUUUA	380	31	1496	4	3	7	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3590786-3592480	Cluster_2000	Pocillopora_meandrina_HIv1___Sc0000005	3590786	3592480	1695	7896	1491	0.05268490374873354	-	UGAGAAUUCUGGAAUUUAUGACAACUCC	696	118	7249	44	161	145	179	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3592669-3593852	Cluster_2001	Pocillopora_meandrina_HIv1___Sc0000005	3592669	3593852	1184	4043	628	0.015582488251298541	-	UAAAGACAAUCAACACUCUUAUUAAUAAAG	528	54	3892	25	14	14	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3596796-3597288	Cluster_2002	Pocillopora_meandrina_HIv1___Sc0000005	3596796	3597288	493	525	214	0.0019047619047619048	-	UCUAUUAACUUUUUGGCGUGUCUCUGUAUU	41	15	495	3	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3598205-3598779	Cluster_2003	Pocillopora_meandrina_HIv1___Sc0000005	3598205	3598779	575	944	280	0.1673728813559322	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	136	9	877	1	1	20	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3599005-3600832	Cluster_2004	Pocillopora_meandrina_HIv1___Sc0000005	3599005	3600832	1828	3280	837	0.21402439024390243	.	UACUUCGUUAAGCUUCGUGAGAUCCACA	232	81	2951	37	73	43	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3602848-3603277	Cluster_2005	Pocillopora_meandrina_HIv1___Sc0000005	3602848	3603277	430	102	28	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	31	0	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3604136-3604811	Cluster_2006	Pocillopora_meandrina_HIv1___Sc0000005	3604136	3604811	676	267	138	0.09363295880149813	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	26	2	253	2	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3605255-3605666	Cluster_2007	Pocillopora_meandrina_HIv1___Sc0000005	3605255	3605666	412	106	52	0.03773584905660377	-	UAUAACGUAAACUGGUCUCCCUUCGAUUCC	16	4	100	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3607300-3607726	Cluster_2008	Pocillopora_meandrina_HIv1___Sc0000005	3607300	3607726	427	276	128	0.007246376811594203	-	UUCAGCUGAGGCUCUUUCAUCUAAUUGU	22	10	254	0	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3711070-3711552	Cluster_2009	Pocillopora_meandrina_HIv1___Sc0000005	3711070	3711552	483	3511	159	0.969809171176303	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	1280	12	3484	5	5	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3731078-3731507	Cluster_2010	Pocillopora_meandrina_HIv1___Sc0000005	3731078	3731507	430	182	42	0.9945054945054945	+	UGACUGGUCAACAAAUGGAAAGCGAAUUGU	98	4	172	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3823463-3824086	Cluster_2011	Pocillopora_meandrina_HIv1___Sc0000005	3823463	3824086	624	423	79	0.09929078014184398	-	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	170	8	403	1	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3824912-3825341	Cluster_2012	Pocillopora_meandrina_HIv1___Sc0000005	3824912	3825341	430	737	73	0.9687924016282226	+	AUGUAGAGUGUCUUUA	204	276	425	11	1	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3825612-3826029	Cluster_2013	Pocillopora_meandrina_HIv1___Sc0000005	3825612	3826029	418	181	74	0.36464088397790057	.	AAAUCAUGGAGAGGAACUGUUCAUU	30	4	155	7	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3880254-3880902	Cluster_2014	Pocillopora_meandrina_HIv1___Sc0000005	3880254	3880902	649	1106	206	0.9891500904159132	+	UUUGCAGGAAAUGUAAUUGAAAGGAAACA	198	33	1052	1	2	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3881011-3881439	Cluster_2015	Pocillopora_meandrina_HIv1___Sc0000005	3881011	3881439	429	225	67	0.9644444444444444	+	UCUUCAGUGUUUGUAACUUCUCUUUUUAC	75	5	219	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3896764-3897262	Cluster_2016	Pocillopora_meandrina_HIv1___Sc0000005	3896764	3897262	499	670	193	0.9925373134328358	+	UGUGAAUUUACUGACCAUCUCGACAUUG	57	6	650	2	7	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3925759-3926817	Cluster_2017	Pocillopora_meandrina_HIv1___Sc0000005	3925759	3926817	1059	1527	612	0.7897838899803536	.	UCUAACGCGUUUGUCUGACAUCCCUUU	147	36	1336	13	36	24	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3928758-3929171	Cluster_2018	Pocillopora_meandrina_HIv1___Sc0000005	3928758	3929171	414	171	86	0.9883040935672515	+	UGUACAAGGUAGAAUUGAAAAUUAAAGACA	12	8	161	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3935142-3935568	Cluster_2019	Pocillopora_meandrina_HIv1___Sc0000005	3935142	3935568	427	143	55	1.0	+	UCUUUGUGCUCUUCUGGAGGUAUGUUC	23	1	139	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3935694-3938335	Cluster_2020	Pocillopora_meandrina_HIv1___Sc0000005	3935694	3938335	2642	8864	1922	0.9928925992779783	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1211	51	8640	19	27	40	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3938637-3939270	Cluster_2021	Pocillopora_meandrina_HIv1___Sc0000005	3938637	3939270	634	380	154	0.9973684210526316	+	UUGGCUAUGUGAACUCUCUCUACUUUGGU	16	11	351	0	1	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3939681-3941351	Cluster_2022	Pocillopora_meandrina_HIv1___Sc0000005	3939681	3941351	1671	3838	982	0.9984366857738406	+	GUCCCGUCGGAGGUGCCA	345	744	3051	10	10	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3946380-3946949	Cluster_2023	Pocillopora_meandrina_HIv1___Sc0000005	3946380	3946949	570	395	136	0.9873417721518988	+	UCAAGAUCUACUACUGUGUGAAAUAAAGCGU	56	13	372	3	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3947796-3948223	Cluster_2024	Pocillopora_meandrina_HIv1___Sc0000005	3947796	3948223	428	229	99	0.9082969432314411	+	UGUAGCAUUCUUUACAAAAGUCUUCAGGA	33	11	216	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3950517-3950939	Cluster_2025	Pocillopora_meandrina_HIv1___Sc0000005	3950517	3950939	423	136	60	0.9852941176470589	+	UGCAAUGCUUUCGACAUCUGACUUGAUUUC	34	4	130	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3954119-3954826	Cluster_2026	Pocillopora_meandrina_HIv1___Sc0000005	3954119	3954826	708	479	172	0.9979123173277662	+	UCAUCCUUGAAAACUGUCUUGAUAAGAGC	83	6	466	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3960917-3961344	Cluster_2027	Pocillopora_meandrina_HIv1___Sc0000005	3960917	3961344	428	182	81	0.9065934065934066	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	70	1	174	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3963376-3963785	Cluster_2028	Pocillopora_meandrina_HIv1___Sc0000005	3963376	3963785	410	315	181	0.7714285714285715	.	UGUUCUUUCUCUGCUGUAAUAUAUGGC	19	4	260	4	5	11	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3964596-3965021	Cluster_2029	Pocillopora_meandrina_HIv1___Sc0000005	3964596	3965021	426	242	113	0.78099173553719	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	30	6	214	4	4	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3981480-3981894	Cluster_2030	Pocillopora_meandrina_HIv1___Sc0000005	3981480	3981894	415	122	10	0.9754098360655737	+	GUUUCUGUAGUGUCG	108	120	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3998294-3998765	Cluster_2031	Pocillopora_meandrina_HIv1___Sc0000005	3998294	3998765	472	522	172	0.7681992337164751	.	UGCUCAUCGUUCGAAUGCUUCUCUGAAGCUU	118	3	475	3	3	6	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4004547-4006095	Cluster_2032	Pocillopora_meandrina_HIv1___Sc0000005	4004547	4006095	1549	6447	1077	0.9727004808438033	+	UGCAAGUUGUAUUUCGCUGGAUGGCCC	440	99	6071	43	26	67	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4006301-4007192	Cluster_2033	Pocillopora_meandrina_HIv1___Sc0000005	4006301	4007192	892	609	336	0.7733990147783252	.	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	27	42	434	47	34	30	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4007731-4008769	Cluster_2034	Pocillopora_meandrina_HIv1___Sc0000005	4007731	4008769	1039	808	349	0.9554455445544554	+	UAACAUCUCUCUUUCCGACUUUAACAGC	47	8	772	2	7	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4008910-4009338	Cluster_2035	Pocillopora_meandrina_HIv1___Sc0000005	4008910	4009338	429	346	140	0.9364161849710982	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	98	6	327	0	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4009354-4010931	Cluster_2036	Pocillopora_meandrina_HIv1___Sc0000005	4009354	4010931	1578	1720	802	0.8959302325581395	+	AAACACAAGGUUGUAUUUAUUCGAAAACUCC	33	41	1568	3	22	23	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4023895-4024323	Cluster_2037	Pocillopora_meandrina_HIv1___Sc0000005	4023895	4024323	429	174	77	0.9597701149425287	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	27	1	170	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4024399-4024942	Cluster_2038	Pocillopora_meandrina_HIv1___Sc0000005	4024399	4024942	544	436	196	0.9151376146788991	+	UGUAUCUUCUUAGGCCAGCAUGUGUACUGA	54	5	422	1	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4024946-4025522	Cluster_2039	Pocillopora_meandrina_HIv1___Sc0000005	4024946	4025522	577	474	242	0.9240506329113924	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	45	2	448	1	6	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4025827-4026433	Cluster_2040	Pocillopora_meandrina_HIv1___Sc0000005	4025827	4026433	607	393	184	0.9465648854961832	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	25	0	379	3	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4027822-4028247	Cluster_2041	Pocillopora_meandrina_HIv1___Sc0000005	4027822	4028247	426	125	59	0.008	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	27	0	120	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4030392-4030921	Cluster_2042	Pocillopora_meandrina_HIv1___Sc0000005	4030392	4030921	530	586	233	0.015358361774744027	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	22	5	577	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4031042-4031471	Cluster_2043	Pocillopora_meandrina_HIv1___Sc0000005	4031042	4031471	430	606	143	0.013201320132013201	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	139	4	592	3	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4102196-4102621	Cluster_2044	Pocillopora_meandrina_HIv1___Sc0000005	4102196	4102621	426	126	63	1.0	+	UUUGAAAGGAUGCAUUAACGAUAGACGU	29	0	125	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4135453-4136039	Cluster_2045	Pocillopora_meandrina_HIv1___Sc0000005	4135453	4136039	587	901	331	0.6170921198668147	.	UAUUCUCCUUCUCGGUCGACUGAGGUUG	50	32	714	15	24	61	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4273351-4273768	Cluster_2046	Pocillopora_meandrina_HIv1___Sc0000005	4273351	4273768	418	276	192	0.9927536231884058	+	GUAUAAAGGAGAGGAUAAGACU	14	83	83	16	40	29	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4315138-4315565	Cluster_2047	Pocillopora_meandrina_HIv1___Sc0000005	4315138	4315565	428	250	84	0.3	.	UUGGAACGUGUUGCUGAACGCUUGUUGC	69	9	222	2	3	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4318505-4319208	Cluster_2048	Pocillopora_meandrina_HIv1___Sc0000005	4318505	4319208	704	258	110	0.9418604651162791	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	30	4	243	0	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4320435-4320867	Cluster_2049	Pocillopora_meandrina_HIv1___Sc0000005	4320435	4320867	433	242	114	0.8305785123966942	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	28	4	206	0	1	5	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4377759-4378183	Cluster_2050	Pocillopora_meandrina_HIv1___Sc0000005	4377759	4378183	425	225	83	1.0	+	AUGAUGAGCGAUUUAUCUCUGACAUUU	35	60	113	14	12	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4402426-4402843	Cluster_2051	Pocillopora_meandrina_HIv1___Sc0000005	4402426	4402843	418	225	14	1.0	+	UUCCCGGCUGAUGCACCA	49	225	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4473566-4473993	Cluster_2052	Pocillopora_meandrina_HIv1___Sc0000005	4473566	4473993	428	188	74	0.015957446808510637	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	23	2	177	1	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4512272-4512700	Cluster_2053	Pocillopora_meandrina_HIv1___Sc0000005	4512272	4512700	429	1303	90	1.0	+	AAUUGUUAAAUGUAACGGGCGUGCUGUU	399	7	1234	1	8	17	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4525551-4525980	Cluster_2054	Pocillopora_meandrina_HIv1___Sc0000005	4525551	4525980	430	331	32	0.0	-	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	134	0	331	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4527011-4527525	Cluster_2055	Pocillopora_meandrina_HIv1___Sc0000005	4527011	4527525	515	3216	358	0.01990049751243781	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGC	593	59	2935	14	35	24	149	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4539470-4539906	Cluster_2056	Pocillopora_meandrina_HIv1___Sc0000005	4539470	4539906	437	310	85	0.00967741935483871	-	UGAAUCUUGACAGUUGGGUUUACUUGUGA	64	5	297	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4615282-4615696	Cluster_2057	Pocillopora_meandrina_HIv1___Sc0000005	4615282	4615696	415	132	10	0.0	-	AUCCAGCGAUCGCGG	116	132	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4663510-4663925	Cluster_2058	Pocillopora_meandrina_HIv1___Sc0000005	4663510	4663925	416	136	6	1.0	+	GUGGUGGACUGCUUGU	107	136	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4734278-4734714	Cluster_2059	Pocillopora_meandrina_HIv1___Sc0000005	4734278	4734714	437	241	123	0.3817427385892116	.	UCCAACAAUUCAAACACUACAACUUUCUGA	16	59	154	22	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4771508-4771922	Cluster_2060	Pocillopora_meandrina_HIv1___Sc0000005	4771508	4771922	415	328	13	1.0	+	GAAUCGGCCGUGGGU	306	327	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4903620-4904044	Cluster_2061	Pocillopora_meandrina_HIv1___Sc0000005	4903620	4904044	425	266	17	0.9586466165413534	+	UCGCCAACUUCUAUGAAAUCUGAGU	192	5	244	0	11	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4922758-4923269	Cluster_2062	Pocillopora_meandrina_HIv1___Sc0000005	4922758	4923269	512	2691	236	0.9847640282422891	+	UCUUUCAAAUCUAUUGUGCAGGUCUCGU	643	34	2629	3	0	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4923738-4924295	Cluster_2063	Pocillopora_meandrina_HIv1___Sc0000005	4923738	4924295	558	1514	378	0.49801849405548215	.	UGCUAUUCAUGAAACCCAUUAGCUUGUCGGG	118	18	1367	4	18	25	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4924542-4925210	Cluster_2064	Pocillopora_meandrina_HIv1___Sc0000005	4924542	4925210	669	9790	1129	0.8352400408580184	+	UUCUCUGCAUUGCUCGAUACCCUAGAUA	1470	169	8281	60	267	582	431	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5081968-5082395	Cluster_2065	Pocillopora_meandrina_HIv1___Sc0000005	5081968	5082395	428	112	14	1.0	+	AUGUAGUGAAACUGAUGGCGGAAUUAAAC	44	5	104	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5338814-5339222	Cluster_2066	Pocillopora_meandrina_HIv1___Sc0000005	5338814	5339222	409	133	106	1.0	+	UCACUGAUGGAAAGACGAGCUCGA	3	42	40	10	12	14	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5359015-5359444	Cluster_2067	Pocillopora_meandrina_HIv1___Sc0000005	5359015	5359444	430	222	109	0.8108108108108109	+	UCUGAUCCGACGAAUAUUAUAAAUGUAGUA	14	4	211	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5377749-5378165	Cluster_2068	Pocillopora_meandrina_HIv1___Sc0000005	5377749	5378165	417	519	29	0.9653179190751445	+	AAUCGGCCGUGGAUC	152	512	6	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5418990-5419564	Cluster_2069	Pocillopora_meandrina_HIv1___Sc0000005	5418990	5419564	575	910	296	0.17472527472527472	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	128	7	847	2	4	23	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5419922-5420338	Cluster_2070	Pocillopora_meandrina_HIv1___Sc0000005	5419922	5420338	417	234	129	0.13247863247863248	-	UGUGCACCGUUCUAUAACAUCUAGCUCGAU	13	10	193	0	10	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5420641-5421617	Cluster_2071	Pocillopora_meandrina_HIv1___Sc0000005	5420641	5421617	977	1251	330	0.17426059152677859	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	147	6	1186	5	1	16	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5422009-5422690	Cluster_2072	Pocillopora_meandrina_HIv1___Sc0000005	5422009	5422690	682	300	154	0.09	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	35	4	277	4	2	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5464207-5464623	Cluster_2073	Pocillopora_meandrina_HIv1___Sc0000005	5464207	5464623	417	105	11	0.9714285714285714	+	UCUCUCAAGGGGCUCCA	45	101	2	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5472880-5473521	Cluster_2074	Pocillopora_meandrina_HIv1___Sc0000005	5472880	5473521	642	453	142	0.869757174392936	+	UACCGUAGAACUUUCCAGAACAUUUCAUUA	69	23	388	7	5	8	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5727566-5728047	Cluster_2075	Pocillopora_meandrina_HIv1___Sc0000005	5727566	5728047	482	434	253	0.35023041474654376	.	UAAUCUCACAAUCUCCGAUGGUACGUCUGG	15	63	288	59	9	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5740802-5741275	Cluster_2076	Pocillopora_meandrina_HIv1___Sc0000005	5740802	5741275	474	1052	349	1.0	+	AUGCAUUUGUUGAGUUCAGGU	121	251	408	228	76	46	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5741785-5742213	Cluster_2077	Pocillopora_meandrina_HIv1___Sc0000005	5741785	5742213	429	439	196	1.0	+	GAAUGCUAAAUGAACUGAUGAGACGU	33	51	299	14	16	21	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5810483-5811004	Cluster_2078	Pocillopora_meandrina_HIv1___Sc0000005	5810483	5811004	522	11113	1425	0.0013497705390083687	-	CCUUUCGGCGGGGCU	3577	7973	1828	368	365	282	297	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5811618-5812183	Cluster_2079	Pocillopora_meandrina_HIv1___Sc0000005	5811618	5812183	566	82943	5401	0.9999276611648964	+	CGUUCGCGCUCGUCCCCUU	8192	37688	21989	7396	8847	3763	3260	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5842229-5842648	Cluster_2080	Pocillopora_meandrina_HIv1___Sc0000005	5842229	5842648	420	81	24	0.037037037037037035	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	47	1	79	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5843650-5844067	Cluster_2081	Pocillopora_meandrina_HIv1___Sc0000005	5843650	5844067	418	241	119	0.995850622406639	+	AACCUUCAACUUUUAUUUUACAAUUU	21	33	117	17	24	24	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5915220-5916129	Cluster_2082	Pocillopora_meandrina_HIv1___Sc0000005	5915220	5916129	910	8507	1182	0.9998824497472669	+	GUUGGGAUUCUGCAUGUGCUGAGCUA	2137	1241	5952	264	328	333	389	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6246291-6246717	Cluster_2083	Pocillopora_meandrina_HIv1___Sc0000005	6246291	6246717	427	230	137	0.8826086956521739	+	UGAGUCGAGGUUAUUCACAAUACGAGC	22	11	202	0	2	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6246955-6247392	Cluster_2084	Pocillopora_meandrina_HIv1___Sc0000005	6246955	6247392	438	633	171	0.9289099526066351	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	92	2	600	2	1	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6264822-6265307	Cluster_2085	Pocillopora_meandrina_HIv1___Sc0000005	6264822	6265307	486	384	239	0.765625	.	UCCGAUUUUCUCAACCGCCUCUUGUCC	12	9	305	4	8	21	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6265385-6266060	Cluster_2086	Pocillopora_meandrina_HIv1___Sc0000005	6265385	6266060	676	8031	558	0.9960154401693438	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2225	9	7902	5	50	28	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6355960-6356378	Cluster_2087	Pocillopora_meandrina_HIv1___Sc0000005	6355960	6356378	419	407	64	0.014742014742014743	-	GUGUGUGUCUCUCUGU	114	385	3	17	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6408877-6409292	Cluster_2088	Pocillopora_meandrina_HIv1___Sc0000005	6408877	6409292	416	981	12	0.9989806320081549	+	CGGCCUGAAAAAAAAA	862	980	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6605546-6605973	Cluster_2089	Pocillopora_meandrina_HIv1___Sc0000005	6605546	6605973	428	218	81	0.9954128440366973	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	39	3	211	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6891562-6891988	Cluster_2090	Pocillopora_meandrina_HIv1___Sc0000005	6891562	6891988	427	164	51	1.0	+	ACAGAUCGGAUCACAGAUCAUGUGAGC	41	28	132	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7006922-7007708	Cluster_2091	Pocillopora_meandrina_HIv1___Sc0000005	7006922	7007708	787	662	284	0.945619335347432	+	UGAUCUGGAAUUCCGAAUCUGGAAAAUGCA	34	5	628	7	3	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7007995-7008971	Cluster_2092	Pocillopora_meandrina_HIv1___Sc0000005	7007995	7008971	977	1199	290	0.902418682235196	+	UUAACUCCGAUCCGAUGACCUAGAAAGU	162	9	1142	3	2	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7009057-7009686	Cluster_2093	Pocillopora_meandrina_HIv1___Sc0000005	7009057	7009686	630	976	387	0.6711065573770492	.	GGAGAAUAUAAGAUUA	93	140	722	12	52	11	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7010048-7010622	Cluster_2094	Pocillopora_meandrina_HIv1___Sc0000005	7010048	7010622	575	888	261	0.8434684684684685	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	127	6	836	0	0	18	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7172757-7173691	Cluster_2095	Pocillopora_meandrina_HIv1___Sc0000005	7172757	7173691	935	1352	373	0.028846153846153848	-	UGUUAAGUGCACUCUUCGUCUUGUUGAA	129	14	1317	6	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7174580-7174987	Cluster_2096	Pocillopora_meandrina_HIv1___Sc0000005	7174580	7174987	408	157	87	0.1592356687898089	-	UCAGACUAGCAACAUGAUCUUCGGUGA	17	1	141	1	3	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7175000-7175423	Cluster_2097	Pocillopora_meandrina_HIv1___Sc0000005	7175000	7175423	424	209	94	0.0430622009569378	-	UCAAAAGCUGCCGAUAAAUCUAAA	40	4	151	1	3	4	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7179152-7179834	Cluster_2098	Pocillopora_meandrina_HIv1___Sc0000005	7179152	7179834	683	280	153	0.9	+	UGACAUGUCGAAACCCGUAAUCUAAAGU	36	5	259	4	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7180225-7181201	Cluster_2099	Pocillopora_meandrina_HIv1___Sc0000005	7180225	7181201	977	1227	317	0.9152404237978811	+	UAACUCCGAUCCGAUGACCUAGAAAGUC	149	20	1166	2	7	7	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7181504-7181916	Cluster_2100	Pocillopora_meandrina_HIv1___Sc0000005	7181504	7181916	413	284	154	0.8661971830985915	+	UGAACUUAACGACACCUAGAUCUGCACAAGC	20	4	253	3	7	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7182278-7182852	Cluster_2101	Pocillopora_meandrina_HIv1___Sc0000005	7182278	7182852	575	957	301	0.8338557993730408	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	132	4	905	3	0	21	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7308193-7308623	Cluster_2102	Pocillopora_meandrina_HIv1___Sc0000005	7308193	7308623	431	425	138	0.007058823529411765	-	UACAAAGCUCUCACGAAUUCACAAACAGA	60	1	419	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7309081-7309961	Cluster_2103	Pocillopora_meandrina_HIv1___Sc0000005	7309081	7309961	881	1208	457	0.009105960264900662	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	80	9	1175	1	7	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7310337-7311209	Cluster_2104	Pocillopora_meandrina_HIv1___Sc0000005	7310337	7311209	873	864	373	0.017361111111111112	-	UGCUGAAACGAUUUUGACAGGUUGUCA	66	10	816	4	5	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7311473-7312074	Cluster_2105	Pocillopora_meandrina_HIv1___Sc0000005	7311473	7312074	602	936	328	0.008547008547008548	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	108	4	924	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7971124-7972081	Cluster_2106	Pocillopora_meandrina_HIv1___Sc0000005	7971124	7972081	958	1323	209	0.1345427059712774	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	424	25	1258	2	3	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8244558-8244974	Cluster_2107	Pocillopora_meandrina_HIv1___Sc0000005	8244558	8244974	417	188	7	1.0	+	GAUGGAUGGAGACCGCG	97	188	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8311363-8311780	Cluster_2108	Pocillopora_meandrina_HIv1___Sc0000005	8311363	8311780	418	260	184	0.9923076923076923	+	UUCGCUGGCAAGCAACUCGAAGACGGCC	7	84	113	16	19	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8311940-8312362	Cluster_2109	Pocillopora_meandrina_HIv1___Sc0000005	8311940	8312362	423	327	256	0.9969418960244648	+	UGAAGUAGAGCCCAGCGACU	7	128	112	18	21	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8312572-8312983	Cluster_2110	Pocillopora_meandrina_HIv1___Sc0000005	8312572	8312983	412	283	209	1.0	+	UCUUCAUUUGGUGUUGCGUCUGAGA	8	75	116	19	28	25	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8456348-8456887	Cluster_2111	Pocillopora_meandrina_HIv1___Sc0000005	8456348	8456887	540	2610	428	0.0007662835249042146	-	GGUUAUAGGACAAUGCUACAUUC	745	584	786	63	97	929	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8917444-8917859	Cluster_2112	Pocillopora_meandrina_HIv1___Sc0000005	8917444	8917859	416	152	13	0.9868421052631579	+	UCGGAAGUGGGGGUUC	60	150	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9057453-9058049	Cluster_2113	Pocillopora_meandrina_HIv1___Sc0000005	9057453	9058049	597	5615	485	0.9976847729296527	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	874	20	5546	2	10	13	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9143137-9143552	Cluster_2114	Pocillopora_meandrina_HIv1___Sc0000005	9143137	9143552	416	159	22	0.050314465408805034	-	UGUAUCCCAACCAAGU	136	143	10	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9204698-9205112	Cluster_2115	Pocillopora_meandrina_HIv1___Sc0000005	9204698	9205112	415	1517	14	0.999340804218853	+	CUUUCCGAGGUCGCA	1416	1514	2	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9285829-9286334	Cluster_2116	Pocillopora_meandrina_HIv1___Sc0000005	9285829	9286334	506	607	245	0.2751235584843493	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	77	8	544	4	7	15	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9287286-9288359	Cluster_2117	Pocillopora_meandrina_HIv1___Sc0000005	9287286	9288359	1074	2599	778	0.2235475182762601	.	UUAUUGCCGAACUGAAUGCUGCUC	130	73	2092	16	40	56	322	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9609413-9609842	Cluster_2118	Pocillopora_meandrina_HIv1___Sc0000005	9609413	9609842	430	350	61	0.9971428571428571	+	UCUUGAAUCACGGUGCUUUUGGAUGUGUC	107	11	335	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10101779-10102187	Cluster_2119	Pocillopora_meandrina_HIv1___Sc0000005	10101779	10102187	409	77	25	0.987012987012987	+	GAAGCGGCCGUGGAUUGGC	19	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10117918-10118347	Cluster_2120	Pocillopora_meandrina_HIv1___Sc0000005	10117918	10118347	430	135	43	0.9925925925925926	+	UGAGUUGGUAAAAUCUGUUCAGACAUCACA	56	17	107	2	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10165111-10165527	Cluster_2121	Pocillopora_meandrina_HIv1___Sc0000005	10165111	10165527	417	307	14	0.003257328990228013	-	ACUGCUGCCGGUCGUUA	174	307	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10301510-10301943	Cluster_2122	Pocillopora_meandrina_HIv1___Sc0000005	10301510	10301943	434	261	83	0.25287356321839083	.	AAGUCAUGAAGGUCAUCGGAAACCCCGA	50	7	253	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10303106-10303644	Cluster_2123	Pocillopora_meandrina_HIv1___Sc0000005	10303106	10303644	539	393	149	0.2366412213740458	.	UGUAACUUUGAGCUUCUUUUUUGCAGGA	114	6	370	1	5	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10337706-10338123	Cluster_2124	Pocillopora_meandrina_HIv1___Sc0000005	10337706	10338123	418	431	35	1.0	+	UCGAACUCGACCCUGA	90	430	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10385497-10385597	Cluster_2125	Pocillopora_meandrina_HIv1___Sc0000005	10385497	10385597	101	57589	358	0.9999652711455312	+	UCAGGGAUUGUGGUGAGUUAGUU	21438	10652	123	1391	10033	31505	3885	23	Y	spi-mir-temp-3_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000005:10461462-10461961	Cluster_2126	Pocillopora_meandrina_HIv1___Sc0000005	10461462	10461961	500	402	294	0.9925373134328358	+	CACUGUGGCAACCAGUGAACGACUGCA	5	120	137	35	26	41	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10543052-10543521	Cluster_2127	Pocillopora_meandrina_HIv1___Sc0000005	10543052	10543521	470	2583	670	0.9969028261711188	+	CCUGAUGUGGAACGGCU	242	1925	253	176	104	75	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10597619-10598036	Cluster_2128	Pocillopora_meandrina_HIv1___Sc0000005	10597619	10598036	418	152	15	0.03289473684210526	-	GACUUGAAGCGGCUGGAU	53	151	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10602442-10602865	Cluster_2129	Pocillopora_meandrina_HIv1___Sc0000005	10602442	10602865	424	141	37	0.3829787234042553	.	CAGAUUCGGUAUAACUUCACAGCU	31	12	4	1	12	44	68	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10816891-10817313	Cluster_2130	Pocillopora_meandrina_HIv1___Sc0000005	10816891	10817313	423	524	74	0.0019083969465648854	-	UGGCAUAAGGGCAGCCACCCCUU	209	72	4	14	12	387	35	23	N	spi-mir-temp-29_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000005:10822550-10822977	Cluster_2131	Pocillopora_meandrina_HIv1___Sc0000005	10822550	10822977	428	1282	97	1.0	+	UUUGGCAUCUGAGAGUC	305	746	364	39	52	51	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10823796-10824278	Cluster_2132	Pocillopora_meandrina_HIv1___Sc0000005	10823796	10824278	483	4154	647	1.0	+	UCUCUGUGAUGAAACAUCU	266	1769	1126	326	311	305	317	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10832517-10832947	Cluster_2133	Pocillopora_meandrina_HIv1___Sc0000005	10832517	10832947	431	1689	334	1.0	+	CAGCUUGGCUGAAGUCUGAUGCACA	232	264	574	131	124	290	306	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10833541-10833970	Cluster_2134	Pocillopora_meandrina_HIv1___Sc0000005	10833541	10833970	430	462	222	1.0	+	GUUGAUCACAAACUCAGCUUGGCU	21	162	135	54	33	28	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10841148-10841565	Cluster_2135	Pocillopora_meandrina_HIv1___Sc0000005	10841148	10841565	418	138	97	0.8405797101449275	+	UAUUGCUGAACAGACGCACG	14	60	38	15	14	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10909091-10909513	Cluster_2136	Pocillopora_meandrina_HIv1___Sc0000005	10909091	10909513	423	480	64	0.9958333333333333	+	UACUGCUAUUCUUCUUCAGGC	105	59	12	134	129	136	10	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11109435-11110604	Cluster_2137	Pocillopora_meandrina_HIv1___Sc0000005	11109435	11110604	1170	1401	593	0.14275517487508924	-	UACAAUAACCUCUGAUUUCACUAAAUG	73	13	1292	7	12	24	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11110703-11111212	Cluster_2138	Pocillopora_meandrina_HIv1___Sc0000005	11110703	11111212	510	815	356	0.25030674846625767	.	UGGACUCUAUCCUUGCCUUGAAUGCCAUGAU	23	21	687	7	16	42	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11111261-11112647	Cluster_2139	Pocillopora_meandrina_HIv1___Sc0000005	11111261	11112647	1387	1744	735	0.22993119266055045	.	CUUUCCGAGGUCGCGA	112	223	1405	11	14	29	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11112920-11115327	Cluster_2140	Pocillopora_meandrina_HIv1___Sc0000005	11112920	11115327	2408	4214	1379	0.07095396298054106	-	UGUACAACCAUCCGAUACUCUUGU	647	41	2974	21	24	79	1075	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11115662-11116088	Cluster_2141	Pocillopora_meandrina_HIv1___Sc0000005	11115662	11116088	427	323	201	0.16718266253869968	-	UGAUUCCGCGCUUAUGACUCGUCCCAU	17	4	282	2	4	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11116246-11116697	Cluster_2142	Pocillopora_meandrina_HIv1___Sc0000005	11116246	11116697	452	228	76	0.021929824561403508	-	UGAACACGCGUACUUGUAAUUAUGAAAUG	26	2	221	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11256775-11257253	Cluster_2143	Pocillopora_meandrina_HIv1___Sc0000005	11256775	11257253	479	640	192	0.9515625	+	UUAUAAGGAUCUCAAGGCGAAUAAAGCA	103	43	532	24	12	5	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11260734-11260823	Cluster_2144	Pocillopora_meandrina_HIv1___Sc0000005	11260734	11260823	90	30570	441	1.0	+	UCAGGUUAGGAGCAUGGUAUAGA	11130	10998	134	1172	4398	13195	673	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000005:11261356-11261449	Cluster_2145	Pocillopora_meandrina_HIv1___Sc0000005	11261356	11261449	94	11338	323	1.0	+	UAUGCCAGGUCCUAACUUGAAA	3008	2707	37	1858	4008	2245	483	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000005:11307792-11308261	Cluster_2146	Pocillopora_meandrina_HIv1___Sc0000005	11307792	11308261	470	3965	526	0.0017654476670870113	-	GAAGUGUUGAUGUUGGAAUUUAUGAAGGCU	286	370	2330	141	562	428	134	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11485270-11485687	Cluster_2147	Pocillopora_meandrina_HIv1___Sc0000005	11485270	11485687	418	201	157	0.0	-	GAGGAGCGAGACAGAAGACU	6	84	55	18	19	20	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11518650-11519090	Cluster_2148	Pocillopora_meandrina_HIv1___Sc0000005	11518650	11519090	441	318	158	0.0031446540880503146	-	UUUCCGCUUAUUAUCUGAUGAU	18	107	51	39	51	33	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11520396-11520872	Cluster_2149	Pocillopora_meandrina_HIv1___Sc0000005	11520396	11520872	477	263	120	0.0038022813688212928	-	ACCAAGUGAUGAGUUUGAAU	17	132	57	40	18	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11705949-11706365	Cluster_2150	Pocillopora_meandrina_HIv1___Sc0000005	11705949	11706365	417	424	30	0.0023584905660377358	-	AGUGUACUCUUAACU	109	414	6	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11883963-11884509	Cluster_2151	Pocillopora_meandrina_HIv1___Sc0000005	11883963	11884509	547	441	163	0.9977324263038548	+	UAGCAUUCCAUGUGUACAGUUGACUUUUGAA	49	55	311	14	9	29	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11901631-11902057	Cluster_2152	Pocillopora_meandrina_HIv1___Sc0000005	11901631	11902057	427	94	25	1.0	+	CCAGAGGAAAAGAAACAACAUGCCACAGA	23	5	85	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12069982-12070398	Cluster_2153	Pocillopora_meandrina_HIv1___Sc0000005	12069982	12070398	417	343	16	1.0	+	GCGGAUGUGGCGGAAU	200	339	3	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12095434-12095848	Cluster_2154	Pocillopora_meandrina_HIv1___Sc0000005	12095434	12095848	415	104	6	0.009615384615384616	-	GAUGAACCGAACGCA	97	101	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12166117-12166543	Cluster_2155	Pocillopora_meandrina_HIv1___Sc0000005	12166117	12166543	427	234	166	0.9615384615384616	+	UGAGGUGGGCAAGCGUACUUCGAGAUC	8	119	59	13	18	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12169309-12169763	Cluster_2156	Pocillopora_meandrina_HIv1___Sc0000005	12169309	12169763	455	285	225	0.9964912280701754	+	GAAAGAGAUUGACGAGGCU	6	98	122	21	15	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12170231-12172359	Cluster_2157	Pocillopora_meandrina_HIv1___Sc0000005	12170231	12172359	2129	3921	2521	0.9971945932160163	+	AUCAUGGAUGCCGCA	26	1639	1079	323	320	291	269	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12225565-12225979	Cluster_2158	Pocillopora_meandrina_HIv1___Sc0000005	12225565	12225979	415	129	10	0.015503875968992248	-	UGCCUGAACAUUUUU	81	129	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12263787-12264201	Cluster_2159	Pocillopora_meandrina_HIv1___Sc0000005	12263787	12264201	415	136	11	0.007352941176470588	-	CGAGCUGUUCUUCCC	115	136	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12311971-12312386	Cluster_2160	Pocillopora_meandrina_HIv1___Sc0000005	12311971	12312386	416	150	7	1.0	+	CUUGAAGCGGUAGGCU	109	150	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12416089-12416515	Cluster_2161	Pocillopora_meandrina_HIv1___Sc0000005	12416089	12416515	427	198	70	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	21	5	183	2	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12421588-12422017	Cluster_2162	Pocillopora_meandrina_HIv1___Sc0000005	12421588	12422017	430	198	35	0.9191919191919192	+	CAAUGUCUUAGUAGAAAAACGUACACCUGU	73	6	175	3	9	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12614499-12617140	Cluster_2163	Pocillopora_meandrina_HIv1___Sc0000005	12614499	12617140	2642	8822	1882	0.007481296758104738	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1250	63	8594	9	26	33	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12632974-12633473	Cluster_2164	Pocillopora_meandrina_HIv1___Sc0000005	12632974	12633473	500	885	327	0.9966101694915255	+	GCAGUGUUAGCAAGGUGGGCUGAGGGAA	82	393	299	53	37	37	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12689818-12690339	Cluster_2165	Pocillopora_meandrina_HIv1___Sc0000005	12689818	12690339	522	8128	1393	0.9891732283464567	+	CCUUGCGGCGGGGCC	635	3182	3263	434	468	384	397	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12718037-12718462	Cluster_2166	Pocillopora_meandrina_HIv1___Sc0000005	12718037	12718462	426	179	55	0.0	-	AUGCAGUCUUACUCUUCUUGUCAACA	62	11	125	10	21	11	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12879314-12879727	Cluster_2167	Pocillopora_meandrina_HIv1___Sc0000005	12879314	12879727	414	136	104	0.9926470588235294	+	CCAAGCAGAAUUGUCUGGAGAACAGUGAGA	5	22	65	10	12	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12880229-12880653	Cluster_2168	Pocillopora_meandrina_HIv1___Sc0000005	12880229	12880653	425	239	140	1.0	+	GUACUGUGUGCUUGGUAGACUGUCC	15	92	78	15	16	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12881759-12882202	Cluster_2169	Pocillopora_meandrina_HIv1___Sc0000005	12881759	12882202	444	293	176	1.0	+	GAAGGCCUUGCAGAACA	9	115	73	25	35	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12952941-12953368	Cluster_2170	Pocillopora_meandrina_HIv1___Sc0000005	12952941	12953368	428	81	23	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	24	0	79	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12980349-12980834	Cluster_2171	Pocillopora_meandrina_HIv1___Sc0000005	12980349	12980834	486	1939	241	0.998452810727179	+	ACUUGAUGGUGAAAGUCUCUUUUUCUGAUU	648	102	1674	14	25	41	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13249316-13249743	Cluster_2172	Pocillopora_meandrina_HIv1___Sc0000005	13249316	13249743	428	144	42	0.013888888888888888	-	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	28	2	140	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13301595-13302016	Cluster_2173	Pocillopora_meandrina_HIv1___Sc0000005	13301595	13302016	422	248	29	0.0	-	UGAAGAUCUUUGCUCUGAAGU	110	51	0	113	57	26	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13318059-13318545	Cluster_2174	Pocillopora_meandrina_HIv1___Sc0000005	13318059	13318545	487	6123	687	0.00032663726931242854	-	UGAUGUUGAUUGUCUCUUUCUGAUUCCA	947	504	3473	516	255	315	1060	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13760603-13761092	Cluster_2175	Pocillopora_meandrina_HIv1___Sc0000005	13760603	13761092	490	2150	487	1.0	+	AUGGAAUGAUGGAUU	107	602	978	83	125	155	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13781493-13781939	Cluster_2176	Pocillopora_meandrina_HIv1___Sc0000005	13781493	13781939	447	675	96	0.31555555555555553	.	UCGUUUAGAUCAGAGAUCACCUCAACU	239	2	661	1	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13806200-13806772	Cluster_2177	Pocillopora_meandrina_HIv1___Sc0000005	13806200	13806772	573	535	58	0.001869158878504673	-	AUCCCACUUCUGACACCA	164	534	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13832568-13833012	Cluster_2178	Pocillopora_meandrina_HIv1___Sc0000005	13832568	13833012	445	9433	77	0.9659705289939574	+	AACUUUUGACGGUGGAUCA	8603	9425	7	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13884196-13884612	Cluster_2179	Pocillopora_meandrina_HIv1___Sc0000005	13884196	13884612	417	384	11	0.0026041666666666665	-	GAUGGAUGGAGACUGCC	370	376	7	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:79291-79707	Cluster_2180	Pocillopora_meandrina_HIv1___Sc0000006	79291	79707	417	2992	35	0.0030080213903743314	-	GAGACUUGAAGCGGUC	1598	2989	2	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:89977-90391	Cluster_2181	Pocillopora_meandrina_HIv1___Sc0000006	89977	90391	415	76	11	1.0	+	UAACUAUGACUCUCU	23	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:109762-110162	Cluster_2182	Pocillopora_meandrina_HIv1___Sc0000006	109762	110162	401	223	147	0.10762331838565023	-	UAGAGACUUUAAGUACUGGAAAUACUUA	20	4	198	5	3	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:110499-111620	Cluster_2183	Pocillopora_meandrina_HIv1___Sc0000006	110499	111620	1122	3347	691	0.14789363609202272	-	UCCUUUCCAAUCUGUUAAUGUUUCUAGC	903	64	3069	14	10	34	156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:119717-120119	Cluster_2184	Pocillopora_meandrina_HIv1___Sc0000006	119717	120119	403	213	99	0.3568075117370892	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	32	3	195	1	0	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:142987-143391	Cluster_2185	Pocillopora_meandrina_HIv1___Sc0000006	142987	143391	405	139	69	0.43884892086330934	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	35	4	121	0	3	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:149399-149826	Cluster_2186	Pocillopora_meandrina_HIv1___Sc0000006	149399	149826	428	452	70	0.022123893805309734	-	AGGUAUAGGUUACUCAAGAUUAAUUGAU	226	2	445	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:261845-262259	Cluster_2187	Pocillopora_meandrina_HIv1___Sc0000006	261845	262259	415	87	6	0.0	-	ACAACUUUUGACGGA	78	87	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:471610-472156	Cluster_2188	Pocillopora_meandrina_HIv1___Sc0000006	471610	472156	547	1135	388	0.43171806167400884	.	UAAGACAUUGGCAUACUUAGCAUACAACA	62	31	865	17	27	67	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:475228-475648	Cluster_2189	Pocillopora_meandrina_HIv1___Sc0000006	475228	475648	421	218	133	0.06880733944954129	-	UGCGUCUUGGUCUUGAUGGUGAGCAUAG	8	21	182	3	5	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:484472-484900	Cluster_2190	Pocillopora_meandrina_HIv1___Sc0000006	484472	484900	429	169	76	0.005917159763313609	-	UUCUGUAGCAGCCGAUGUCCUGGGAGAUGG	22	1	157	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:490464-490892	Cluster_2191	Pocillopora_meandrina_HIv1___Sc0000006	490464	490892	429	184	55	0.010869565217391304	-	UCAAAGAACUCUUUCGACUGCUCAUGGGC	66	15	166	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:495473-496305	Cluster_2192	Pocillopora_meandrina_HIv1___Sc0000006	495473	496305	833	564	224	0.9609929078014184	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	52	2	550	2	1	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:497239-497707	Cluster_2193	Pocillopora_meandrina_HIv1___Sc0000006	497239	497707	469	708	262	0.11016949152542373	-	UGUAUACCAAAUGAUGACUCAAGUCGACGU	105	11	653	1	4	8	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:497821-498249	Cluster_2194	Pocillopora_meandrina_HIv1___Sc0000006	497821	498249	429	235	130	0.2297872340425532	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	23	1	219	0	0	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:499995-500445	Cluster_2195	Pocillopora_meandrina_HIv1___Sc0000006	499995	500445	451	434	99	0.020737327188940093	-	UCUAGAUGGAUAUACUCGGAUAACUUACU	107	10	411	3	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:503729-504277	Cluster_2196	Pocillopora_meandrina_HIv1___Sc0000006	503729	504277	549	1146	186	0.0034904013961605585	-	UGAUUGAGUCAAAGACAAUGUGGGAGUUA	212	9	1097	5	7	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:506791-507628	Cluster_2197	Pocillopora_meandrina_HIv1___Sc0000006	506791	507628	838	991	338	0.044399596367305755	-	UAAUGACUUCAGAGUAGACAGAGACGGU	74	8	951	9	2	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:507698-508124	Cluster_2198	Pocillopora_meandrina_HIv1___Sc0000006	507698	508124	427	352	93	0.06534090909090909	-	UGUACAAGGUCGAAAGAAUCCAGGAUA	184	4	323	2	0	2	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:508498-508924	Cluster_2199	Pocillopora_meandrina_HIv1___Sc0000006	508498	508924	427	153	78	0.13071895424836602	-	UCAGACUAGCAACAUGAUCUUCGGUGA	21	2	142	0	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:508937-509360	Cluster_2200	Pocillopora_meandrina_HIv1___Sc0000006	508937	509360	424	194	95	0.04639175257731959	-	UCAAAAGCUGCCGAUAAAUCUAAA	31	3	138	1	3	5	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:513018-513961	Cluster_2201	Pocillopora_meandrina_HIv1___Sc0000006	513018	513961	944	43604	673	9.173470323823502e-05	-	UUCAAUGUGAAAAGUCUACUUAGGAUGAGU	27173	24	43527	5	11	14	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:517129-517558	Cluster_2202	Pocillopora_meandrina_HIv1___Sc0000006	517129	517558	430	443	93	0.0	-	UUGAACGUCACUGUCUAUAAGCAAUGC	40	0	422	0	2	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:520036-520463	Cluster_2203	Pocillopora_meandrina_HIv1___Sc0000006	520036	520463	428	213	98	0.004694835680751174	-	UGGAAACUAUCGUAUGAAAAGAAAUCAAAGU	41	1	206	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:521145-521553	Cluster_2204	Pocillopora_meandrina_HIv1___Sc0000006	521145	521553	409	117	53	0.0	-	UGAUCGACUGUAUGAAAGCUUUAAGAUGGU	34	9	96	2	1	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:523336-523765	Cluster_2205	Pocillopora_meandrina_HIv1___Sc0000006	523336	523765	430	266	127	0.0	-	UGAGAAGAUCUUUUAUUCGUCGCGGCCAUU	58	1	259	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:524628-525055	Cluster_2206	Pocillopora_meandrina_HIv1___Sc0000006	524628	525055	428	300	123	0.0	-	UGGGUGUAGUGCUGAAUACUGCAGCAUU	78	3	289	0	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:525192-525606	Cluster_2207	Pocillopora_meandrina_HIv1___Sc0000006	525192	525606	415	197	116	0.0	-	UAAGUUACACUGAUUUAACUCCUUUACA	10	2	194	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:525830-526680	Cluster_2208	Pocillopora_meandrina_HIv1___Sc0000006	525830	526680	851	634	275	0.0	-	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	53	7	615	2	7	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:526964-528351	Cluster_2209	Pocillopora_meandrina_HIv1___Sc0000006	526964	528351	1388	5280	1003	0.009659090909090909	-	UUGUAACUGCGAUCGUUCUUUGGAGC	311	38	4885	22	102	144	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:528645-529126	Cluster_2210	Pocillopora_meandrina_HIv1___Sc0000006	528645	529126	482	455	238	0.03736263736263736	-	UGAUUUUUGUUCUUUUUGUUGAGGCUGCAA	24	4	435	1	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:529151-530055	Cluster_2211	Pocillopora_meandrina_HIv1___Sc0000006	529151	530055	905	1544	469	0.006476683937823834	-	UAAGACAAGUACUUCAAACACUCUCUAGUAG	130	14	1485	4	4	10	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:531071-531472	Cluster_2212	Pocillopora_meandrina_HIv1___Sc0000006	531071	531472	402	106	41	0.009433962264150943	-	UGAAAGAUCUAGAUGAGACAUUUAACGCACU	23	0	102	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:531713-532132	Cluster_2213	Pocillopora_meandrina_HIv1___Sc0000006	531713	532132	420	88	45	0.0	-	UUUUUAAAAUAAGACUCUCGGAAAUGCGUU	19	0	86	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:537436-537912	Cluster_2214	Pocillopora_meandrina_HIv1___Sc0000006	537436	537912	477	3121	296	0.007369432874078821	-	UGAUUGAGUCAAAGACAAUGUGGGAGUU	1176	7	3014	3	8	8	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:540451-540877	Cluster_2215	Pocillopora_meandrina_HIv1___Sc0000006	540451	540877	427	212	90	0.009433962264150943	-	UGGUGUCGCUGUAGCAUUAUACAUGUUUAC	50	11	199	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:542720-543123	Cluster_2216	Pocillopora_meandrina_HIv1___Sc0000006	542720	543123	404	157	75	0.0	-	UACUAGUCUGUGACCUUAUUUGAAUUUGUA	25	7	148	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:543292-543722	Cluster_2217	Pocillopora_meandrina_HIv1___Sc0000006	543292	543722	431	249	82	0.004016064257028112	-	UUUACAGGGAUUUGGAAACAAAAAUUACAUC	96	15	229	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:547215-547644	Cluster_2218	Pocillopora_meandrina_HIv1___Sc0000006	547215	547644	430	501	138	0.0	-	UUGAACGUCACUGUCUAUAAGCAAUGCAA	40	4	468	0	9	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:553903-554404	Cluster_2219	Pocillopora_meandrina_HIv1___Sc0000006	553903	554404	502	599	126	0.0	-	UUUUCCAGAAAGACCAUUAACACUUAGAUU	184	2	596	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:554894-555325	Cluster_2220	Pocillopora_meandrina_HIv1___Sc0000006	554894	555325	432	743	156	0.0	-	UUUGAAACCCCGAUUCAGUUGGACAAAACU	289	22	713	0	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:560719-561285	Cluster_2221	Pocillopora_meandrina_HIv1___Sc0000006	560719	561285	567	576	174	0.015625	-	UAAGAACUAACUGGUGUGAGGUGCUAUU	174	11	557	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:561705-562132	Cluster_2222	Pocillopora_meandrina_HIv1___Sc0000006	561705	562132	428	214	128	0.014018691588785047	-	UCGAGAUCCUGAGCU	11	21	187	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:566406-566836	Cluster_2223	Pocillopora_meandrina_HIv1___Sc0000006	566406	566836	431	466	71	0.002145922746781116	-	UUUCUGCACUUAUUGGCAAUCUUUUGCUGGA	80	4	455	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:567087-567762	Cluster_2224	Pocillopora_meandrina_HIv1___Sc0000006	567087	567762	676	376	127	0.0026595744680851063	-	UGACAUGCAGGUAUACAAUGAAAGCAAGA	39	7	363	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:567808-568217	Cluster_2225	Pocillopora_meandrina_HIv1___Sc0000006	567808	568217	410	222	80	0.0	-	UGAGAUGCUUGGUAAUUAUAGGUUCGG	36	14	197	3	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:568764-569364	Cluster_2226	Pocillopora_meandrina_HIv1___Sc0000006	568764	569364	601	380	147	0.002631578947368421	-	UGAGAAUUCACAGCUCUGAUAUAGAAGAUA	34	17	355	2	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:664078-664487	Cluster_2227	Pocillopora_meandrina_HIv1___Sc0000006	664078	664487	410	190	113	0.868421052631579	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUG	14	1	175	2	2	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:743223-743711	Cluster_2228	Pocillopora_meandrina_HIv1___Sc0000006	743223	743711	489	1060	249	0.8688679245283019	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	140	12	940	5	12	68	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:790840-791737	Cluster_2229	Pocillopora_meandrina_HIv1___Sc0000006	790840	791737	898	516	225	0.5348837209302325	.	UAUUCUUAUCAUCUGCGUUUGGUCUACUGC	35	6	466	1	3	13	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:807710-808138	Cluster_2230	Pocillopora_meandrina_HIv1___Sc0000006	807710	808138	429	260	95	0.24615384615384617	.	UGUACAUCAAUUCUUUAUCCAAACCACU	35	4	239	1	1	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:958695-959196	Cluster_2231	Pocillopora_meandrina_HIv1___Sc0000006	958695	959196	502	439	165	0.18223234624145787	-	UUGGAACGUGUUGCUGAACGCUUGCU	37	27	366	9	15	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1012623-1013052	Cluster_2232	Pocillopora_meandrina_HIv1___Sc0000006	1012623	1013052	430	287	67	0.006968641114982578	-	AGUUGACAUAUUGACUGGUACGAACAAGGG	45	6	270	0	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1058984-1059413	Cluster_2233	Pocillopora_meandrina_HIv1___Sc0000006	1058984	1059413	430	368	73	0.8967391304347826	+	UCAUUUCUUCUACAGACACUGGAUACCAGA	104	7	305	6	2	16	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1068383-1068820	Cluster_2234	Pocillopora_meandrina_HIv1___Sc0000006	1068383	1068820	438	251	141	0.6374501992031872	.	UCAUACGGCUUCUUGAAUUUAUCCAGU	21	9	217	4	5	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1070154-1070581	Cluster_2235	Pocillopora_meandrina_HIv1___Sc0000006	1070154	1070581	428	97	14	1.0	+	UACCAAGGUCUUGUAGUCUAGUACAACU	54	0	95	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1072085-1072497	Cluster_2236	Pocillopora_meandrina_HIv1___Sc0000006	1072085	1072497	413	158	79	0.8481012658227848	+	UGCGAAAUGAACUCAGAGCUUUCUG	30	0	149	0	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1102308-1102883	Cluster_2237	Pocillopora_meandrina_HIv1___Sc0000006	1102308	1102883	576	538	223	0.29739776951672864	.	UAUGACAGUUUUUCCGACAUCGAAUUUAGC	33	27	492	1	4	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1103054-1103459	Cluster_2238	Pocillopora_meandrina_HIv1___Sc0000006	1103054	1103459	406	97	64	0.23711340206185566	.	UCUUCUCUGACAAAUUCUACU	9	11	67	11	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1107124-1107548	Cluster_2239	Pocillopora_meandrina_HIv1___Sc0000006	1107124	1107548	425	130	71	0.2692307692307692	.	UAAGAGAUCAACUGUCAACGGACGGCU	10	2	125	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1117900-1118499	Cluster_2240	Pocillopora_meandrina_HIv1___Sc0000006	1117900	1118499	600	2975	420	0.09546218487394958	-	UAUCAUGGUCUAAAAUUGGUGCUUCAGUU	588	9	2871	8	13	35	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1119518-1119944	Cluster_2241	Pocillopora_meandrina_HIv1___Sc0000006	1119518	1119944	427	177	63	0.3050847457627119	.	UUAAAACGUGUUGCUGAACGCUUGCUAC	30	9	158	4	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1184892-1185316	Cluster_2242	Pocillopora_meandrina_HIv1___Sc0000006	1184892	1185316	425	105	48	0.02857142857142857	-	AAUGGGAAAACGAGAACAGCGUGAGUGA	35	3	93	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1283609-1284026	Cluster_2243	Pocillopora_meandrina_HIv1___Sc0000006	1283609	1284026	418	189	64	0.9312169312169312	+	UAAAUCUGGAGACUGGGC	52	149	23	8	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1564153-1564568	Cluster_2244	Pocillopora_meandrina_HIv1___Sc0000006	1564153	1564568	416	205	46	0.0	-	AAACUGCGAAUGGCU	53	205	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1704199-1704640	Cluster_2245	Pocillopora_meandrina_HIv1___Sc0000006	1704199	1704640	442	263	103	0.870722433460076	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	42	5	219	10	1	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1760581-1761006	Cluster_2246	Pocillopora_meandrina_HIv1___Sc0000006	1760581	1761006	426	233	100	0.8454935622317596	+	UCGAGAGAUUUAUCCUAGAAAGGCGAGC	19	16	185	0	1	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1763833-1764238	Cluster_2247	Pocillopora_meandrina_HIv1___Sc0000006	1763833	1764238	406	214	129	0.677570093457944	.	ACGCGAACGAACUGUGCUCUUAUUGCAAC	12	6	195	3	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1764725-1765152	Cluster_2248	Pocillopora_meandrina_HIv1___Sc0000006	1764725	1765152	428	299	97	0.9130434782608695	+	UCAUAACUAGUGUCCAGAUCUCUCAUC	50	22	274	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1770604-1771021	Cluster_2249	Pocillopora_meandrina_HIv1___Sc0000006	1770604	1771021	418	158	91	0.9873417721518988	+	UGAGUAUUUUUCUAGUUCUGGGACUGCC	10	3	140	1	2	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1785098-1785525	Cluster_2250	Pocillopora_meandrina_HIv1___Sc0000006	1785098	1785525	428	261	119	0.9923371647509579	+	UUCGUCACCAUCUUCACUUUCCCUCAGUGC	26	5	245	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1794331-1794759	Cluster_2251	Pocillopora_meandrina_HIv1___Sc0000006	1794331	1794759	429	234	67	0.9743589743589743	+	UUACAAUUUCUCUCUUGACCUUUAAUUUC	88	7	204	1	2	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1796727-1797520	Cluster_2252	Pocillopora_meandrina_HIv1___Sc0000006	1796727	1797520	794	1225	352	0.950204081632653	+	UUGGGAUUGUGACUGGUUUAAAGGUGAGU	109	16	1150	15	15	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1800817-1801246	Cluster_2253	Pocillopora_meandrina_HIv1___Sc0000006	1800817	1801246	430	453	119	0.9889624724061811	+	UGAACUGCAAGAAACUGCUCGUGGAUCUGC	170	11	428	0	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1801823-1802256	Cluster_2254	Pocillopora_meandrina_HIv1___Sc0000006	1801823	1802256	434	390	113	0.9974358974358974	+	UUCACCAGGAACGAUCUCAGGUACUUUG	63	2	374	1	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1802435-1802851	Cluster_2255	Pocillopora_meandrina_HIv1___Sc0000006	1802435	1802851	417	210	109	1.0	+	UGUCUGACAGUUGUCGUUCUGUACCGUC	11	3	206	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1810844-1811273	Cluster_2256	Pocillopora_meandrina_HIv1___Sc0000006	1810844	1811273	430	125	29	0.992	+	UGCCUUAAGACCAGAUUGUUUACAGUGAGA	67	4	119	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1814556-1815680	Cluster_2257	Pocillopora_meandrina_HIv1___Sc0000006	1814556	1815680	1125	892	316	0.9932735426008968	+	UCCAUUUCCAUACUUGAGCUUGAGCCACC	80	14	853	2	7	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1839231-1839665	Cluster_2258	Pocillopora_meandrina_HIv1___Sc0000006	1839231	1839665	435	307	169	1.0	+	UCAGAUUUGUGCUUGAUGGUCUGUGUGC	12	5	297	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1841407-1841835	Cluster_2259	Pocillopora_meandrina_HIv1___Sc0000006	1841407	1841835	429	256	107	0.98828125	+	UGAAAGAUAUUGUGGUGCGACGCCGUAGA	29	1	252	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1846848-1847277	Cluster_2260	Pocillopora_meandrina_HIv1___Sc0000006	1846848	1847277	430	197	75	0.9949238578680203	+	UUUAUAUCUGUGUAUUUCAACUUUGGCGUU	52	3	193	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1850115-1853109	Cluster_2261	Pocillopora_meandrina_HIv1___Sc0000006	1850115	1853109	2995	9780	1737	0.9877300613496932	+	UGAAUACUUAAGGGUCGGUCAGGCUGAUA	1156	102	9469	22	38	61	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1861618-1862023	Cluster_2262	Pocillopora_meandrina_HIv1___Sc0000006	1861618	1862023	406	158	79	0.23417721518987342	.	UAAGCAAUGUCGGUUUCCAAAAUAAACUGG	15	1	146	2	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1864158-1864864	Cluster_2263	Pocillopora_meandrina_HIv1___Sc0000006	1864158	1864864	707	389	208	0.5038560411311054	.	UAAGGUUUCCAAUUGCCUCCGUUGGGCA	15	16	311	18	7	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1881939-1882474	Cluster_2264	Pocillopora_meandrina_HIv1___Sc0000006	1881939	1882474	536	768	282	0.8919270833333334	+	UUAUCCUUUAGUUUUGAGUCUGGCAAUU	63	21	701	4	7	7	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1895833-1897291	Cluster_2265	Pocillopora_meandrina_HIv1___Sc0000006	1895833	1897291	1459	3971	1161	0.592797783933518	.	UUAAAUCACAUUUACGCUGCAAUCUGGA	110	91	3359	74	104	147	196	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1897414-1898305	Cluster_2266	Pocillopora_meandrina_HIv1___Sc0000006	1897414	1898305	892	4745	714	0.8410958904109589	+	UACGCGAGGAAGUCUUUACCCAUGAAUG	763	65	4404	12	55	107	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1898536-1898963	Cluster_2267	Pocillopora_meandrina_HIv1___Sc0000006	1898536	1898963	428	412	74	0.9563106796116505	+	UGAGUUAAUAUCUGGUCCACUGAAGAA	126	8	371	1	1	30	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1899014-1899789	Cluster_2268	Pocillopora_meandrina_HIv1___Sc0000006	1899014	1899789	776	10133	963	0.2684298825619264	.	GAACUUCAGAUCUUUACGUGACUACAGCA	1558	210	9356	26	30	68	443	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1900971-1902395	Cluster_2269	Pocillopora_meandrina_HIv1___Sc0000006	1900971	1902395	1425	10292	1992	0.4049747376603187	.	ACACAGUGCAACUCUCGAAUCUUAAAAAU	807	144	8983	113	113	360	579	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1902953-1903570	Cluster_2270	Pocillopora_meandrina_HIv1___Sc0000006	1902953	1903570	618	650	167	0.9846153846153847	+	UACGGUGUUCCAUGCCUCUGUAUGAAG	70	4	614	8	4	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1921978-1922403	Cluster_2271	Pocillopora_meandrina_HIv1___Sc0000006	1921978	1922403	426	155	82	0.8451612903225807	+	UAUGAAUGCUCUCGUUGUUGACUGAAG	12	0	139	1	2	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1930277-1930845	Cluster_2272	Pocillopora_meandrina_HIv1___Sc0000006	1930277	1930845	569	557	171	0.48473967684021546	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	203	10	486	3	6	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1946306-1946734	Cluster_2273	Pocillopora_meandrina_HIv1___Sc0000006	1946306	1946734	429	454	130	0.9669603524229075	+	UGUAGAAUCAAUCUGUUACUAAGACACC	105	4	426	11	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1948505-1949040	Cluster_2274	Pocillopora_meandrina_HIv1___Sc0000006	1948505	1949040	536	527	182	0.8178368121442126	+	UGUAUUCACUUGGGUUAACUCUUCCACA	112	1	506	2	3	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1967024-1967498	Cluster_2275	Pocillopora_meandrina_HIv1___Sc0000006	1967024	1967498	475	5084	153	0.021243115656963022	-	CAUUCUGCUUACACGGUUUGAGGACUUGUA	2482	5	5052	0	3	13	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1972166-1972656	Cluster_2276	Pocillopora_meandrina_HIv1___Sc0000006	1972166	1972656	491	1029	183	0.11370262390670553	-	UGAGAUUGGCUGGGAUUUUGGUGAGUGG	99	22	957	6	6	20	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1978683-1979221	Cluster_2277	Pocillopora_meandrina_HIv1___Sc0000006	1978683	1979221	539	532	185	0.20488721804511278	.	UGUAUUCACUUGGGUUAACUCUUCCACA	111	0	514	1	4	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1980989-1981417	Cluster_2278	Pocillopora_meandrina_HIv1___Sc0000006	1980989	1981417	429	460	135	0.03695652173913044	-	UGUAGAAUCAAUCUGUUACUAAGACACC	119	2	431	17	5	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2002625-2003025	Cluster_2279	Pocillopora_meandrina_HIv1___Sc0000006	2002625	2003025	401	128	52	0.0078125	-	UGUGUGUUUCUUUCGUGCGUAUUCAGAGC	15	1	125	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2004194-2005361	Cluster_2280	Pocillopora_meandrina_HIv1___Sc0000006	2004194	2005361	1168	2948	924	0.05122116689280869	-	UAAUUUCUUUCAGUUGUUGGCUUGAGG	295	32	2665	18	20	44	169	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2007314-2007983	Cluster_2281	Pocillopora_meandrina_HIv1___Sc0000006	2007314	2007983	670	2048	253	0.0048828125	-	UGUCAAAUUCAGGUUGUGUCAGGAGUCUGC	364	9	1994	2	3	26	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2010508-2010936	Cluster_2282	Pocillopora_meandrina_HIv1___Sc0000006	2010508	2010936	429	510	69	0.9588235294117647	+	UUGAGUCUUUCUUUAGUAAUAUGCAGUG	81	0	503	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2012351-2012779	Cluster_2283	Pocillopora_meandrina_HIv1___Sc0000006	2012351	2012779	429	221	93	0.03619909502262444	-	UAUGAUUGAAUUGACUCGUGGUAGCUAUU	18	5	201	2	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2027220-2027971	Cluster_2284	Pocillopora_meandrina_HIv1___Sc0000006	2027220	2027971	752	413	230	0.05084745762711865	-	UGAUCGUGUUUUUCAGCCCAUAGUUGGACA	37	17	346	12	4	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2029210-2029632	Cluster_2285	Pocillopora_meandrina_HIv1___Sc0000006	2029210	2029632	423	165	79	0.006060606060606061	-	UGAUUUGUUGCUCAACGUAAUUCGUAACCGG	19	2	163	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2032671-2033100	Cluster_2286	Pocillopora_meandrina_HIv1___Sc0000006	2032671	2033100	430	895	121	0.004469273743016759	-	UGUUAUCACGUCUGUACUCUUCAAUCGAC	475	2	888	0	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2042803-2043817	Cluster_2287	Pocillopora_meandrina_HIv1___Sc0000006	2042803	2043817	1015	1061	331	0.16211121583411875	-	UAAGAUCUCUUCGGUCAGAUCGUCACGG	147	11	1032	0	0	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2044075-2044510	Cluster_2288	Pocillopora_meandrina_HIv1___Sc0000006	2044075	2044510	436	1292	131	0.9195046439628483	+	UGUAUCUGCAGCUCUUGUUAAUUUGUGC	265	3	1277	0	4	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2058209-2058968	Cluster_2289	Pocillopora_meandrina_HIv1___Sc0000006	2058209	2058968	760	1585	350	0.950788643533123	+	UGCAAUUUGAAAUCCUUUGUCGGCCAUA	131	30	1342	10	6	166	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2062003-2063021	Cluster_2290	Pocillopora_meandrina_HIv1___Sc0000006	2062003	2063021	1019	1377	632	0.6601307189542484	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	68	26	1221	12	11	36	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2064227-2064648	Cluster_2291	Pocillopora_meandrina_HIv1___Sc0000006	2064227	2064648	422	237	159	0.15611814345991562	-	CUUGGAUUGAUGCAGAAGUUAACA	13	3	210	2	0	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2065283-2065701	Cluster_2292	Pocillopora_meandrina_HIv1___Sc0000006	2065283	2065701	419	162	70	0.030864197530864196	-	UUAUCAGGAUCUCAAGGCGAAUAAAGCAAG	18	7	153	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2067012-2067673	Cluster_2293	Pocillopora_meandrina_HIv1___Sc0000006	2067012	2067673	662	822	289	0.00851581508515815	-	UGACAGACUCCCAGAC	124	179	589	5	3	17	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2070860-2071363	Cluster_2294	Pocillopora_meandrina_HIv1___Sc0000006	2070860	2071363	504	3872	365	0.6224173553719008	.	UCGUUUCAAUGCUCUGAGCACUGUUGCUC	710	23	3497	13	40	124	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2071608-2072035	Cluster_2295	Pocillopora_meandrina_HIv1___Sc0000006	2071608	2072035	428	137	47	0.029197080291970802	-	UCAGAAUUGGUGGGCUCAGUGGACGGCC	31	0	133	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2074248-2075236	Cluster_2296	Pocillopora_meandrina_HIv1___Sc0000006	2074248	2075236	989	1499	465	0.02401601067378252	-	UGAACGGAACUGUUGUUGUGGAUGACAUC	141	58	1366	16	20	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2075446-2075875	Cluster_2297	Pocillopora_meandrina_HIv1___Sc0000006	2075446	2075875	430	396	163	0.007575757575757576	-	UCCAUAGUCAUCUGUGAUAUCUUCAGAGA	40	10	367	2	2	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2077278-2077698	Cluster_2298	Pocillopora_meandrina_HIv1___Sc0000006	2077278	2077698	421	189	99	0.005291005291005291	-	UGAAUCGCUGUAGGUUUGGCCUGUGAAG	19	7	180	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2082366-2082803	Cluster_2299	Pocillopora_meandrina_HIv1___Sc0000006	2082366	2082803	438	1431	243	0.001397624039133473	-	UGUGAAUUCCUUCUCAAAAAGAGCCUGG	147	1	1386	1	3	2	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2083932-2084468	Cluster_2300	Pocillopora_meandrina_HIv1___Sc0000006	2083932	2084468	537	1186	252	0.011804384485666104	-	UGUUUCGCUCUUCAGUAAAAUCCCAGUUGA	111	23	1094	7	0	4	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2085227-2085652	Cluster_2301	Pocillopora_meandrina_HIv1___Sc0000006	2085227	2085652	426	145	54	0.027586206896551724	-	UCCUGCCUCCUCUGUACGAUAUUGCUGUG	29	5	139	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2086591-2087011	Cluster_2302	Pocillopora_meandrina_HIv1___Sc0000006	2086591	2087011	421	196	97	0.0	-	UGAUCUUACUUGUUUCAACUCUGAGUCAGA	29	3	182	1	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2088855-2089282	Cluster_2303	Pocillopora_meandrina_HIv1___Sc0000006	2088855	2089282	428	170	62	0.01764705882352941	-	UUAUACGUGAAAAAUCUGUUCCGCUCUAUGU	20	7	161	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2089782-2090266	Cluster_2304	Pocillopora_meandrina_HIv1___Sc0000006	2089782	2090266	485	228	114	0.013157894736842105	-	UAAAUGUCGUGAGGUUGCUGUUUGAGCAUA	18	10	213	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2093361-2094326	Cluster_2305	Pocillopora_meandrina_HIv1___Sc0000006	2093361	2094326	966	8347	683	0.011980352222355337	-	UGAUUUGUUGCUGCCCUCUUGCUGC	2555	84	7923	18	64	109	149	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2094699-2095210	Cluster_2306	Pocillopora_meandrina_HIv1___Sc0000006	2094699	2095210	512	991	305	0.05247225025227043	-	UGGUUUGUUGAGGCAUUUGUCUAAUGGC	102	22	943	8	4	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2097988-2098522	Cluster_2307	Pocillopora_meandrina_HIv1___Sc0000006	2097988	2098522	535	459	203	0.013071895424836602	-	UGCGAUUUAACUGGAUACUGGGUGUGGUU	50	15	428	0	2	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2098994-2099492	Cluster_2308	Pocillopora_meandrina_HIv1___Sc0000006	2098994	2099492	499	481	208	0.010395010395010396	-	UAGGUUCUUUAAGGGAAUAUUCAAAACGUG	45	13	455	1	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2100159-2100564	Cluster_2309	Pocillopora_meandrina_HIv1___Sc0000006	2100159	2100564	406	277	132	0.02527075812274368	-	UGAUUACUUGCUGGCCUUCCUCUGAAGU	22	8	254	0	0	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2100775-2101564	Cluster_2310	Pocillopora_meandrina_HIv1___Sc0000006	2100775	2101564	790	518	268	0.03088803088803089	-	UGGGUGUGGAUUUCCUUAGCUGAUAAAUA	46	24	478	4	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2103424-2103853	Cluster_2311	Pocillopora_meandrina_HIv1___Sc0000006	2103424	2103853	430	171	76	0.011695906432748537	-	UUCGAACACUUUGUCUCUUACCACCAGAGC	51	8	159	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2105131-2105704	Cluster_2312	Pocillopora_meandrina_HIv1___Sc0000006	2105131	2105704	574	573	260	0.0034904013961605585	-	UUCCUGCACAGCUCACAUUUAAAACUGUC	84	22	541	2	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2106041-2107040	Cluster_2313	Pocillopora_meandrina_HIv1___Sc0000006	2106041	2107040	1000	3047	505	0.0935346242205448	-	UGCACUUCAUUUUCUGGGAUUUCAUUGUUC	1039	95	2668	21	12	214	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2107148-2108374	Cluster_2314	Pocillopora_meandrina_HIv1___Sc0000006	2107148	2108374	1227	9373	1239	0.0006401365624666595	-	UUGGUGUGAUUGUCAUGUCUGGGAAUUUU	832	145	8945	39	115	61	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2108910-2109311	Cluster_2315	Pocillopora_meandrina_HIv1___Sc0000006	2108910	2109311	402	98	35	0.0	-	UGUGAAAAUUCUCUGCGCCAAUUAGUUGAGC	27	1	93	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2110009-2110473	Cluster_2316	Pocillopora_meandrina_HIv1___Sc0000006	2110009	2110473	465	1804	168	0.0	-	UACAGCUCUUCAAUUUCUGCAUUUCCAGA	657	3	1793	4	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2222589-2223007	Cluster_2317	Pocillopora_meandrina_HIv1___Sc0000006	2222589	2223007	419	147	8	0.0	-	GAAGUUCUGGUUUAAAAAA	85	146	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2367614-2368043	Cluster_2318	Pocillopora_meandrina_HIv1___Sc0000006	2367614	2368043	430	150	58	0.02	-	UCUGCUGUAUAUUCCAAUCUUUGUCAAUGA	22	5	141	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2381037-2381442	Cluster_2319	Pocillopora_meandrina_HIv1___Sc0000006	2381037	2381442	406	210	105	0.10476190476190476	-	UCAUCUUUGGUACAUUAGUAAUCACACAA	22	5	188	1	1	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2382028-2382706	Cluster_2320	Pocillopora_meandrina_HIv1___Sc0000006	2382028	2382706	679	1249	361	0.22257806244995998	.	UCAGCUCGAUCCAGAUCAUUAGCUAAUGAAU	125	17	1133	2	7	23	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2406541-2407009	Cluster_2321	Pocillopora_meandrina_HIv1___Sc0000006	2406541	2407009	469	1792	191	0.004464285714285714	-	UGGGGAAGGUCUUCUUGGUCUGGAGAAA	462	18	1630	7	6	40	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2407808-2408403	Cluster_2322	Pocillopora_meandrina_HIv1___Sc0000006	2407808	2408403	596	806	161	0.018610421836228287	-	UUUGAUUUUAAUGGGAUGCUACUGCCCUGUA	182	22	759	3	6	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2409396-2409958	Cluster_2323	Pocillopora_meandrina_HIv1___Sc0000006	2409396	2409958	563	209	86	0.009569377990430622	-	UUGUCUUGUAUACUCCUUGGCUAGCUGU	22	2	200	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2415407-2415972	Cluster_2324	Pocillopora_meandrina_HIv1___Sc0000006	2415407	2415972	566	752	195	0.013297872340425532	-	UGAAACGAAUAGCUGCUCAACCUGUGGG	63	25	701	0	7	14	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2429559-2429960	Cluster_2325	Pocillopora_meandrina_HIv1___Sc0000006	2429559	2429960	402	184	99	0.44021739130434784	.	UGCAAACUCGUCUGUAGACUCUGUACG	21	5	178	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2430788-2432068	Cluster_2326	Pocillopora_meandrina_HIv1___Sc0000006	2430788	2432068	1281	5441	1172	0.963977210071678	+	UCUUCGCUGAUUUCUUCCCACAGGGACU	255	32	5305	7	10	39	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2434449-2434864	Cluster_2327	Pocillopora_meandrina_HIv1___Sc0000006	2434449	2434864	416	335	18	0.0	-	UAGGGUGCUGUCGGCU	297	332	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2446610-2447281	Cluster_2328	Pocillopora_meandrina_HIv1___Sc0000006	2446610	2447281	672	382	122	0.08115183246073299	-	UGCGAGGAAAAGCUUGUGUAGACGCGGC	46	10	360	3	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2448506-2448935	Cluster_2329	Pocillopora_meandrina_HIv1___Sc0000006	2448506	2448935	430	104	23	0.009615384615384616	-	UGCUUGUCCCACUGUACGACCUUAGUCGUC	68	2	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2456276-2456696	Cluster_2330	Pocillopora_meandrina_HIv1___Sc0000006	2456276	2456696	421	106	32	0.0	-	UAGGAUCUUGUAAGAGAAGCUGCGCUUCCA	28	1	101	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2481723-2482147	Cluster_2331	Pocillopora_meandrina_HIv1___Sc0000006	2481723	2482147	425	247	126	0.020242914979757085	-	UGCUACCCAGUUCUGUGUCUUCAUUGAAUG	16	9	234	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2483224-2483653	Cluster_2332	Pocillopora_meandrina_HIv1___Sc0000006	2483224	2483653	430	236	105	0.059322033898305086	-	UUCUCGCUGAUUGAUCUAAAUAAAGACUUU	22	4	229	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2490005-2491194	Cluster_2333	Pocillopora_meandrina_HIv1___Sc0000006	2490005	2491194	1190	4286	778	0.006532897806812879	-	UACUGUCAGGUUGGUGAAAGUGUAUGAGU	925	86	3975	18	87	26	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2492778-2493187	Cluster_2334	Pocillopora_meandrina_HIv1___Sc0000006	2492778	2493187	410	166	76	0.09036144578313253	-	UGUGUUUCUAUAAGUUCUGUUGCUUUAU	11	4	158	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2493873-2494299	Cluster_2335	Pocillopora_meandrina_HIv1___Sc0000006	2493873	2494299	427	256	127	0.02734375	-	UGUGUGCUGGAAGAAAUCUUUGAAAGGA	14	4	246	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2494752-2495463	Cluster_2336	Pocillopora_meandrina_HIv1___Sc0000006	2494752	2495463	712	973	355	0.012332990750256937	-	UGGUUGCUAUACACUCUCUGAGCUUGGU	97	21	921	2	4	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2510446-2510874	Cluster_2337	Pocillopora_meandrina_HIv1___Sc0000006	2510446	2510874	429	377	72	0.002652519893899204	-	UAUGACGGUACUUUCAAUGGCUUCAGGC	136	1	342	2	16	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2511054-2511479	Cluster_2338	Pocillopora_meandrina_HIv1___Sc0000006	2511054	2511479	426	126	66	0.023809523809523808	-	UGACGUGAAAGUUUCUGGACUUGUUUC	12	0	123	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2516343-2516833	Cluster_2339	Pocillopora_meandrina_HIv1___Sc0000006	2516343	2516833	491	330	104	0.0030303030303030303	-	UGUCCUUCCUGAAGAUGGUGUAACCAGGA	42	7	296	23	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2534257-2535024	Cluster_2340	Pocillopora_meandrina_HIv1___Sc0000006	2534257	2535024	768	1958	336	0.16496424923391215	-	UUUCCUCUGUUACUGGUAGGAACGGACAGU	220	130	1669	39	14	19	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2544036-2544465	Cluster_2341	Pocillopora_meandrina_HIv1___Sc0000006	2544036	2544465	430	136	45	0.0	-	UGUUCAAGAAUCUGUCUGGUCAAAUCCAUC	59	3	131	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2544883-2545307	Cluster_2342	Pocillopora_meandrina_HIv1___Sc0000006	2544883	2545307	425	117	54	0.02564102564102564	-	UAGGAAAGAUCUUGAUGACUAUGAUUCCCA	26	6	104	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2547406-2547834	Cluster_2343	Pocillopora_meandrina_HIv1___Sc0000006	2547406	2547834	429	156	47	0.00641025641025641	-	CAGGAUUCGACACUGUAAAUUUCAUGGUG	38	5	148	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2552089-2552517	Cluster_2344	Pocillopora_meandrina_HIv1___Sc0000006	2552089	2552517	429	242	88	0.012396694214876033	-	UGGUAUUGGAUACUCUGAGCACUUGAGGGC	31	4	231	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2554191-2554619	Cluster_2345	Pocillopora_meandrina_HIv1___Sc0000006	2554191	2554619	429	144	53	0.0	-	UUGGUUUCCGAGGCACGGUCUUUGACAGU	43	5	138	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2556125-2556552	Cluster_2346	Pocillopora_meandrina_HIv1___Sc0000006	2556125	2556552	428	146	48	0.0	-	UGCAUAUCUGCUGCAGACAAGGUGAAGAAU	42	2	138	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2561827-2564936	Cluster_2347	Pocillopora_meandrina_HIv1___Sc0000006	2561827	2564936	3110	8113	2184	0.0192283988660175	-	UCUUCAAUGAUUUCUUGUGCUGUCUGGG	327	115	7753	34	38	75	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2565126-2566072	Cluster_2348	Pocillopora_meandrina_HIv1___Sc0000006	2565126	2566072	947	2107	693	0.03322259136212625	-	UGUUUGGAGUGUCUGACGGCGUCUGUUC	103	27	1982	10	11	23	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2568267-2568696	Cluster_2349	Pocillopora_meandrina_HIv1___Sc0000006	2568267	2568696	430	826	152	0.00847457627118644	-	UUUUCACAAUCCUUCUGCUUCACUGUAGC	331	11	805	1	3	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2569202-2570581	Cluster_2350	Pocillopora_meandrina_HIv1___Sc0000006	2569202	2570581	1380	10459	1016	0.0005736686107658476	-	UAACACAAAAUAUCUGUUGAUUCAUGAGG	1516	181	9991	91	30	97	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2573127-2573671	Cluster_2351	Pocillopora_meandrina_HIv1___Sc0000006	2573127	2573671	545	1491	257	0.012072434607645875	-	UUGCAAAGAUAAAUCCGUGGCGAACUUC	228	14	1459	2	3	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2575795-2576223	Cluster_2352	Pocillopora_meandrina_HIv1___Sc0000006	2575795	2576223	429	140	43	0.0	-	UGUACAAAACUCUGAUGCCAUUAUGCCUC	62	0	133	3	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2577640-2579128	Cluster_2353	Pocillopora_meandrina_HIv1___Sc0000006	2577640	2579128	1489	5216	1465	0.08646472392638037	-	UGAGAUGACGAAAACAACACCUGUUAGU	156	88	4689	27	44	171	197	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2579143-2580188	Cluster_2354	Pocillopora_meandrina_HIv1___Sc0000006	2579143	2580188	1046	2511	767	0.06093189964157706	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	295	54	2326	17	26	38	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2580255-2580666	Cluster_2355	Pocillopora_meandrina_HIv1___Sc0000006	2580255	2580666	412	119	73	0.04201680672268908	-	UGAGUAAAGAUUGUUAGAAACUGUUUCAAUG	7	1	102	1	5	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2581562-2583132	Cluster_2356	Pocillopora_meandrina_HIv1___Sc0000006	2581562	2583132	1571	13903	1718	0.03287060346687765	-	UUUGACGGUCCUUUCAAUAUCUUCGGGAU	2053	240	13212	39	57	95	260	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2583203-2583715	Cluster_2357	Pocillopora_meandrina_HIv1___Sc0000006	2583203	2583715	513	6133	516	0.6275884558943421	.	CGGUACUACAAAAAGAUCCUGAUGGACAGU	1531	83	5102	40	14	97	797	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2586120-2586969	Cluster_2358	Pocillopora_meandrina_HIv1___Sc0000006	2586120	2586969	850	1570	405	0.3872611464968153	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	169	29	1482	18	5	9	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2612856-2613281	Cluster_2359	Pocillopora_meandrina_HIv1___Sc0000006	2612856	2613281	426	223	68	0.017937219730941704	-	UGAUGAUUCAUAUUGUUACAGUUUGU	75	8	200	1	0	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2629857-2630321	Cluster_2360	Pocillopora_meandrina_HIv1___Sc0000006	2629857	2630321	465	2997	414	0.0	-	CUGAUUAAAAUAACCUCACAGAGCUCU	221	707	1715	226	172	51	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2630686-2631147	Cluster_2361	Pocillopora_meandrina_HIv1___Sc0000006	2630686	2631147	462	4559	710	0.000877385391533231	-	GAGGAAUGUGAAUAUGUCUACUGAUGAUA	516	526	3501	139	140	115	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2631458-2631927	Cluster_2362	Pocillopora_meandrina_HIv1___Sc0000006	2631458	2631927	470	1575	485	0.0012698412698412698	-	UGUCAAUGAAGAACAAUACGA	91	419	645	129	128	131	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2632079-2632574	Cluster_2363	Pocillopora_meandrina_HIv1___Sc0000006	2632079	2632574	496	5609	601	0.0007131395970761277	-	CCACUGUGAUGACUCGAAUAAUCCC	1056	977	2562	273	572	562	663	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2632754-2633251	Cluster_2364	Pocillopora_meandrina_HIv1___Sc0000006	2632754	2633251	498	4161	539	0.0002403268445085316	-	CCACCGUGAUGACUAGA	403	2070	1058	258	216	302	257	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2760526-2760954	Cluster_2365	Pocillopora_meandrina_HIv1___Sc0000006	2760526	2760954	429	321	58	1.0	+	UUUCAAGAAAGCUCUGGAAUUGUGUGCAG	88	11	298	1	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2904384-2904807	Cluster_2366	Pocillopora_meandrina_HIv1___Sc0000006	2904384	2904807	424	79	21	0.0379746835443038	-	UUCAAUCACUUGCUUGAGAUCGUGU	20	4	73	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3026686-3027096	Cluster_2367	Pocillopora_meandrina_HIv1___Sc0000006	3026686	3027096	411	135	74	0.9481481481481482	+	UGUGACCGAGGUCUUGAAAAU	11	58	13	27	19	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3077641-3078920	Cluster_2368	Pocillopora_meandrina_HIv1___Sc0000006	3077641	3078920	1280	1720	604	0.8831395348837209	+	UUCUGAAGUACUUUCCCAAUAACACUGAAA	53	17	1593	5	13	44	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3080503-3081013	Cluster_2369	Pocillopora_meandrina_HIv1___Sc0000006	3080503	3081013	511	971	306	0.6766220391349125	.	UAAACAUGCAGCGCCGUCUUCUACUGAGA	148	7	897	7	9	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3082040-3083002	Cluster_2370	Pocillopora_meandrina_HIv1___Sc0000006	3082040	3083002	963	2855	592	0.5824868651488616	.	AAAUGUCUCAAGUUCAGUGGAAUCAGUG	183	27	2665	5	15	33	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3084650-3085078	Cluster_2371	Pocillopora_meandrina_HIv1___Sc0000006	3084650	3085078	429	314	66	0.9904458598726115	+	UAGGACAACUGAGAAUCCACGUAGACUC	101	0	308	0	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3160145-3160569	Cluster_2372	Pocillopora_meandrina_HIv1___Sc0000006	3160145	3160569	425	911	91	0.020856201975850714	-	GUUUAUAUCAAGUUUUCAGACUGUG	387	6	626	8	3	143	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3181843-3182252	Cluster_2373	Pocillopora_meandrina_HIv1___Sc0000006	3181843	3182252	410	130	86	0.6923076923076923	.	UGCGGACCUUUGUGAGAACAG	12	72	5	42	9	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3248159-3248782	Cluster_2374	Pocillopora_meandrina_HIv1___Sc0000006	3248159	3248782	624	1317	210	0.02733485193621868	-	UCAUAGAGUUUAAGACAAGCCCAACAGGUC	444	33	1200	11	47	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3295055-3295481	Cluster_2375	Pocillopora_meandrina_HIv1___Sc0000006	3295055	3295481	427	115	40	0.0	-	UGGGUUGACUGAAUUUGUGUGGAAGCUG	26	14	96	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3295560-3295986	Cluster_2376	Pocillopora_meandrina_HIv1___Sc0000006	3295560	3295986	427	96	16	0.03125	-	UAACCCGAGAACUGACACGUGAGUAGUC	61	1	85	0	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3300115-3300542	Cluster_2377	Pocillopora_meandrina_HIv1___Sc0000006	3300115	3300542	428	94	13	0.010638297872340425	-	UAACCCGAGAACUGACACGUGAGUAGUC	67	0	88	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3308604-3309513	Cluster_2378	Pocillopora_meandrina_HIv1___Sc0000006	3308604	3309513	910	986	456	0.08620689655172414	-	UCUGUACUAGAGCAAGAACAAGGUUUU	43	13	888	6	5	12	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3309928-3310355	Cluster_2379	Pocillopora_meandrina_HIv1___Sc0000006	3309928	3310355	428	120	54	0.016666666666666666	-	UAUCAAGUAGAGAUGUCUGAGCCCGAGG	16	1	114	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3447869-3448298	Cluster_2380	Pocillopora_meandrina_HIv1___Sc0000006	3447869	3448298	430	193	50	0.9119170984455959	+	UCAGAUUUUAGGUGGCAUACGAAACACUCA	44	3	189	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3486280-3486972	Cluster_2381	Pocillopora_meandrina_HIv1___Sc0000006	3486280	3486972	693	514	160	1.0	+	GUUAGUGAUGAUGAAGUAAA	68	143	302	25	12	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3756605-3757221	Cluster_2382	Pocillopora_meandrina_HIv1___Sc0000006	3756605	3757221	617	3022	1063	0.99933818663137	+	CGCGGAUAAAAGACA	80	1139	1127	205	159	197	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3772459-3772886	Cluster_2383	Pocillopora_meandrina_HIv1___Sc0000006	3772459	3772886	428	152	42	1.0	+	UUGAAUCUUCUCUCACAUUCUCUGGAGC	53	4	144	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3780818-3781314	Cluster_2384	Pocillopora_meandrina_HIv1___Sc0000006	3780818	3781314	497	572	193	0.8129370629370629	+	UGUACGUUCUUGCAAUGUUUGGCAAUGC	30	35	491	4	4	19	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3800420-3802391	Cluster_2385	Pocillopora_meandrina_HIv1___Sc0000006	3800420	3802391	1972	5575	1559	0.939372197309417	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	479	26	5343	13	19	53	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3802927-3803661	Cluster_2386	Pocillopora_meandrina_HIv1___Sc0000006	3802927	3803661	735	330	144	0.9636363636363636	+	UCAUCUCGGUUUUUGCAAAAUGUCAA	16	1	308	2	1	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3804713-3805120	Cluster_2387	Pocillopora_meandrina_HIv1___Sc0000006	3804713	3805120	408	190	114	0.17894736842105263	-	UUGACGCACAUUUCUGAGCCUAGAAAUC	9	8	162	1	0	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3807595-3808403	Cluster_2388	Pocillopora_meandrina_HIv1___Sc0000006	3807595	3808403	809	4570	688	0.9652078774617068	+	UGCGAUAAAUGGCCAUGUGCAGUGAACC	876	58	4421	4	21	28	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3809026-3809444	Cluster_2389	Pocillopora_meandrina_HIv1___Sc0000006	3809026	3809444	419	103	48	1.0	+	AGCCUCAAGGAUGUUAUAAGAUAUG	18	8	89	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3816637-3817067	Cluster_2390	Pocillopora_meandrina_HIv1___Sc0000006	3816637	3817067	431	239	92	0.8786610878661087	+	UGUAAACUCUUGAAGGCUCUGAAAUAGCUCA	36	3	216	6	4	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3821515-3821939	Cluster_2391	Pocillopora_meandrina_HIv1___Sc0000006	3821515	3821939	425	129	48	0.9844961240310077	+	UUCUAGACAAGAUCUUUAAUAAAAAAUAA	25	6	118	3	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3825839-3826524	Cluster_2392	Pocillopora_meandrina_HIv1___Sc0000006	3825839	3826524	686	3109	645	0.9761981344483757	+	UAACCGAUUUGAUCAAUGCUUCUGACGUGC	185	22	3019	11	7	23	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3834837-3835264	Cluster_2393	Pocillopora_meandrina_HIv1___Sc0000006	3834837	3835264	428	219	79	0.9954337899543378	+	UUUAUCAGUAUGAUGACUCUUUUUCACA	19	10	188	17	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3837756-3838530	Cluster_2394	Pocillopora_meandrina_HIv1___Sc0000006	3837756	3838530	775	958	402	0.8569937369519833	+	UAGGCGUUAAACUUUCAUUGAUAA	129	9	750	1	10	16	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3841572-3842002	Cluster_2395	Pocillopora_meandrina_HIv1___Sc0000006	3841572	3842002	431	397	54	0.9974811083123426	+	UUACUGCACUGAGGAUAACAAUGAUCAAUGA	100	10	382	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3857245-3857660	Cluster_2396	Pocillopora_meandrina_HIv1___Sc0000006	3857245	3857660	416	396	36	1.0	+	GUGCUUGGGAUCUGU	259	391	4	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3870710-3871269	Cluster_2397	Pocillopora_meandrina_HIv1___Sc0000006	3870710	3871269	560	551	217	0.9147005444646098	+	UAUUAUCGAUAAGAAUCCCUAAACAUGU	43	9	514	1	6	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3872110-3872537	Cluster_2398	Pocillopora_meandrina_HIv1___Sc0000006	3872110	3872537	428	255	109	0.9764705882352941	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	64	0	248	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3872932-3873340	Cluster_2399	Pocillopora_meandrina_HIv1___Sc0000006	3872932	3873340	409	130	81	0.4846153846153846	.	ACUGGAUACAAAACUGCUCGAUGC	22	4	79	2	2	5	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3887839-3888263	Cluster_2400	Pocillopora_meandrina_HIv1___Sc0000006	3887839	3888263	425	112	52	0.9464285714285714	+	UUUUCCAGAAAGACCAUUAACACUU	14	3	100	2	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3898252-3898679	Cluster_2401	Pocillopora_meandrina_HIv1___Sc0000006	3898252	3898679	428	287	134	0.9790940766550522	+	UGACUCAGUAGGGGUGUUUCUAUGCGCCAGU	15	3	268	2	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3899292-3899913	Cluster_2402	Pocillopora_meandrina_HIv1___Sc0000006	3899292	3899913	622	966	248	0.9927536231884058	+	UGUAAUACUUCAACAAGGGUGCCUCUGUC	140	8	944	0	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3900289-3901921	Cluster_2403	Pocillopora_meandrina_HIv1___Sc0000006	3900289	3901921	1633	2184	768	0.9725274725274725	+	UCUUCAAUGAUUUCUUGUGCUGUCUGGG	132	31	2061	10	12	18	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3907554-3908831	Cluster_2404	Pocillopora_meandrina_HIv1___Sc0000006	3907554	3908831	1278	2124	396	0.9096045197740112	+	UGAUUGUGUUUUCCAGGAACGUGUAAUGC	352	8	1945	5	16	38	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3911965-3912393	Cluster_2405	Pocillopora_meandrina_HIv1___Sc0000006	3911965	3912393	429	261	90	0.9693486590038314	+	UCUCUCUGUUUUGGCCACCUGAAUGUGCA	36	11	245	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3921710-3922139	Cluster_2406	Pocillopora_meandrina_HIv1___Sc0000006	3921710	3922139	430	292	37	1.0	+	UGCUUCUAGAGUCAAGUGGGACAAAGACU	86	1	288	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3954142-3954951	Cluster_2407	Pocillopora_meandrina_HIv1___Sc0000006	3954142	3954951	810	515	285	0.45436893203883494	.	UGAGAUCGUGGAAGGCCAAGUUCCUUGC	28	15	476	1	6	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4000949-4001363	Cluster_2408	Pocillopora_meandrina_HIv1___Sc0000006	4000949	4001363	415	142	7	0.04929577464788732	-	GAUGAGGCUCAUAAC	135	136	2	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4058767-4059686	Cluster_2409	Pocillopora_meandrina_HIv1___Sc0000006	4058767	4059686	920	4439	336	0.17751745888713674	-	UUGGUGUCAUAGAAGCUUGUAGUAUCU	1793	78	4230	26	6	55	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4360792-4361217	Cluster_2410	Pocillopora_meandrina_HIv1___Sc0000006	4360792	4361217	426	186	68	0.010752688172043012	-	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	34	1	177	1	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4527159-4527575	Cluster_2411	Pocillopora_meandrina_HIv1___Sc0000006	4527159	4527575	417	125	33	0.984	+	CGGCCUGAAAAAAAAAAA	16	109	1	4	2	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4597982-4598401	Cluster_2412	Pocillopora_meandrina_HIv1___Sc0000006	4597982	4598401	420	187	13	0.946524064171123	+	UGAAAAUCUUUGCUCUGAAA	132	182	1	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4669470-4670011	Cluster_2413	Pocillopora_meandrina_HIv1___Sc0000006	4669470	4670011	542	442	218	0.011312217194570135	-	UAGGAACAUGUCAAUUCGCACAUUC	82	106	245	23	25	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4705513-4705928	Cluster_2414	Pocillopora_meandrina_HIv1___Sc0000006	4705513	4705928	416	98	13	0.0	-	GCUACUUUGACCUCACC	42	97	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4741301-4741728	Cluster_2415	Pocillopora_meandrina_HIv1___Sc0000006	4741301	4741728	428	316	84	0.990506329113924	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	93	15	292	1	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4761102-4761535	Cluster_2416	Pocillopora_meandrina_HIv1___Sc0000006	4761102	4761535	434	1852	65	0.0026997840172786176	-	UGUACCGUGAAACUGGACACUGAAGUUC	1127	2	1801	0	2	45	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4791746-4792175	Cluster_2417	Pocillopora_meandrina_HIv1___Sc0000006	4791746	4792175	430	190	52	0.15789473684210525	-	UGUGUUCCGAAUUGCACGAAAAAGGUCUAU	60	33	146	0	11	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4866022-4866448	Cluster_2418	Pocillopora_meandrina_HIv1___Sc0000006	4866022	4866448	427	150	65	0.86	+	UGAAGGGUUAUACAAAAAUAGGCUGUGC	20	6	132	1	2	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5072948-5073362	Cluster_2419	Pocillopora_meandrina_HIv1___Sc0000006	5072948	5073362	415	89	19	0.02247191011235955	-	AACUGCAGACGGUGGAU	51	83	4	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5095710-5096124	Cluster_2420	Pocillopora_meandrina_HIv1___Sc0000006	5095710	5096124	415	95	13	1.0	+	CGGCCUGAAAAAAGAA	30	91	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5140145-5140551	Cluster_2421	Pocillopora_meandrina_HIv1___Sc0000006	5140145	5140551	407	80	32	0.0625	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	26	0	80	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5141311-5141739	Cluster_2422	Pocillopora_meandrina_HIv1___Sc0000006	5141311	5141739	429	214	108	0.14953271028037382	-	UAGGCUAGUAGACCAAGUGACGCAGGCGU	21	6	182	1	1	19	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5164016-5164444	Cluster_2423	Pocillopora_meandrina_HIv1___Sc0000006	5164016	5164444	429	2603	96	0.0	-	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1568	4	2593	0	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5165241-5165661	Cluster_2424	Pocillopora_meandrina_HIv1___Sc0000006	5165241	5165661	421	91	36	0.02197802197802198	-	UUUUACGCAUGGGCUUUGAUGGU	14	3	62	2	3	18	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5171945-5172369	Cluster_2425	Pocillopora_meandrina_HIv1___Sc0000006	5171945	5172369	425	265	137	0.720754716981132	.	UGUAAGACGCACUCUACUCUGUUGU	60	26	214	8	4	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5240370-5240798	Cluster_2426	Pocillopora_meandrina_HIv1___Sc0000006	5240370	5240798	429	377	131	0.050397877984084884	-	UCUGUCUCCUCUGUAAUAAUGACACUGA	69	5	358	1	2	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5265155-5265569	Cluster_2427	Pocillopora_meandrina_HIv1___Sc0000006	5265155	5265569	415	186	17	0.978494623655914	+	GGUGUGCUCUUAACA	52	184	0	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5363172-5363581	Cluster_2428	Pocillopora_meandrina_HIv1___Sc0000006	5363172	5363581	410	103	43	0.8058252427184466	+	UUGGUGCAUUUCGAUCCUUGCUGUUCA	15	3	98	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5536702-5537200	Cluster_2429	Pocillopora_meandrina_HIv1___Sc0000006	5536702	5537200	499	5589	1091	0.9940955448201825	+	GCUGAUUGAAAACUUUUCCCAAUA	326	1903	1637	495	396	386	772	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5546629-5547169	Cluster_2430	Pocillopora_meandrina_HIv1___Sc0000006	5546629	5547169	541	1837	470	0.0	-	GAUGGCUUGGGUGCUCAUGGGAACAUAU	184	171	1251	81	113	136	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5547280-5547754	Cluster_2431	Pocillopora_meandrina_HIv1___Sc0000006	5547280	5547754	475	655	265	0.0015267175572519084	-	GCUACUCAGCUGUGACUGU	104	280	170	28	59	57	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5732271-5732686	Cluster_2432	Pocillopora_meandrina_HIv1___Sc0000006	5732271	5732686	416	100	8	1.0	+	AUAGGGGCGAAAGACA	80	94	6	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5733785-5734203	Cluster_2433	Pocillopora_meandrina_HIv1___Sc0000006	5733785	5734203	419	712	28	0.0014044943820224719	-	CUUUCUGGAGUUAAGGCUU	541	712	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5739667-5740104	Cluster_2434	Pocillopora_meandrina_HIv1___Sc0000006	5739667	5740104	438	596	232	0.9966442953020134	+	GCUGAUUGAAAACUUUUCCCAAUA	40	198	176	46	45	58	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5820601-5821030	Cluster_2435	Pocillopora_meandrina_HIv1___Sc0000006	5820601	5821030	430	429	69	1.0	+	UGCCUCAAAUCAUAAAAUUACUUGU	107	2	423	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5824415-5825515	Cluster_2436	Pocillopora_meandrina_HIv1___Sc0000006	5824415	5825515	1101	1217	382	0.9942481511914544	+	UAACCUGUGAAAUAAAAAGAAUGAAGUUGAC	73	32	1128	2	6	18	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5830168-5831006	Cluster_2437	Pocillopora_meandrina_HIv1___Sc0000006	5830168	5831006	839	3217	529	0.979173142679515	+	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUGG	498	74	3029	15	45	30	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5831468-5832293	Cluster_2438	Pocillopora_meandrina_HIv1___Sc0000006	5831468	5832293	826	1011	327	0.9990108803165183	+	UUGUCUGCUGUACUCUAACGAUUUGUUUC	64	7	980	8	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5832723-5834537	Cluster_2439	Pocillopora_meandrina_HIv1___Sc0000006	5832723	5834537	1815	10238	1642	0.9442273881617503	+	UGCAUCAAGCAGGAAAAAAAGACAAUGA	732	193	9394	69	111	167	304	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5834970-5835396	Cluster_2440	Pocillopora_meandrina_HIv1___Sc0000006	5834970	5835396	427	271	83	1.0	+	UCUGCCAGUCUUCUUGGACCUUGCCUGC	26	10	259	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5837604-5839281	Cluster_2441	Pocillopora_meandrina_HIv1___Sc0000006	5837604	5839281	1678	2195	685	0.9945330296127562	+	UGAGAUGUCACUAUUGAAUAUUUAACAAGA	177	59	2076	8	8	26	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5839523-5840406	Cluster_2442	Pocillopora_meandrina_HIv1___Sc0000006	5839523	5840406	884	1013	350	0.9930898321816387	+	UGACAUGCUUAGAAUUUUCAGCUAAAUUGA	147	16	974	2	2	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5840532-5841060	Cluster_2443	Pocillopora_meandrina_HIv1___Sc0000006	5840532	5841060	529	719	244	1.0	+	UGAUAAUAGAGAGACGUUAAUUGUAGCAGU	41	9	688	0	3	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5841188-5841618	Cluster_2444	Pocillopora_meandrina_HIv1___Sc0000006	5841188	5841618	431	891	121	1.0	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	186	23	865	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5841975-5842405	Cluster_2445	Pocillopora_meandrina_HIv1___Sc0000006	5841975	5842405	431	779	97	1.0	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	173	16	759	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5842763-5843542	Cluster_2446	Pocillopora_meandrina_HIv1___Sc0000006	5842763	5843542	780	7156	430	0.9984628283957518	+	UGCCACAUAGUGAAUUUUGCUGAACGUU	847	67	6956	97	9	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5843551-5843981	Cluster_2447	Pocillopora_meandrina_HIv1___Sc0000006	5843551	5843981	431	755	107	0.9947019867549669	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	152	16	729	1	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5846808-5847473	Cluster_2448	Pocillopora_meandrina_HIv1___Sc0000006	5846808	5847473	666	4298	731	0.036993950674732434	-	UGAAGCGAUAUGAAAGAUCUUGAUGUG	268	61	4107	11	21	26	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5848646-5849073	Cluster_2449	Pocillopora_meandrina_HIv1___Sc0000006	5848646	5849073	428	217	112	0.7004608294930875	.	UGUUGCAAAGGCUAUGGCAAACACUCCGC	14	7	200	7	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5849772-5850690	Cluster_2450	Pocillopora_meandrina_HIv1___Sc0000006	5849772	5850690	919	764	253	0.819371727748691	+	UACUGAUGGUUUGUCUUUAAACUGAAAUU	87	11	712	3	4	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5850812-5851241	Cluster_2451	Pocillopora_meandrina_HIv1___Sc0000006	5850812	5851241	430	257	117	0.19066147859922178	-	UCCCAGCGUAUGAACGACUCUCUUAUUUCA	32	2	228	2	1	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5851721-5852501	Cluster_2452	Pocillopora_meandrina_HIv1___Sc0000006	5851721	5852501	781	324	97	0.9938271604938271	+	UGGACUUUGCUUCUUUUGCCAAUUGUGC	70	6	313	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5858323-5860151	Cluster_2453	Pocillopora_meandrina_HIv1___Sc0000006	5858323	5860151	1829	9142	1432	0.04397287245679282	-	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	2910	50	8824	19	50	67	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5860316-5860878	Cluster_2454	Pocillopora_meandrina_HIv1___Sc0000006	5860316	5860878	563	5973	488	0.9343713376862548	+	UGCAAUGGAUCUAGUACUAUCAAGUUC	2743	33	5801	9	66	30	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5860987-5861969	Cluster_2455	Pocillopora_meandrina_HIv1___Sc0000006	5860987	5861969	983	1290	411	0.7325581395348837	.	UGUUUUGUUUCUGAUUAACCUUGUGC	141	23	1182	20	6	16	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5863662-5865679	Cluster_2456	Pocillopora_meandrina_HIv1___Sc0000006	5863662	5865679	2018	22332	3640	0.06318287658964715	-	UGAGAGAAAUUUUUCUUUGAAAUCUGCAGG	1827	279	20962	133	196	274	488	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5866040-5868243	Cluster_2457	Pocillopora_meandrina_HIv1___Sc0000006	5866040	5868243	2204	5241	1765	0.19366533104369396	-	UGAGGAAUAUAUCAAAGAAGGUCGUGAUC	175	97	4877	83	31	68	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5872014-5873328	Cluster_2458	Pocillopora_meandrina_HIv1___Sc0000006	5872014	5873328	1315	6012	1143	0.9161676646706587	+	UACUUCCAUGACUGGUUGAGGAUAGAUG	659	127	5309	41	52	241	242	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5875872-5877160	Cluster_2459	Pocillopora_meandrina_HIv1___Sc0000006	5875872	5877160	1289	3547	893	0.921623907527488	+	UCAGCUCUUUCUAACUCUGCAAUUUGAGGU	268	40	3282	15	95	52	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5882690-5883493	Cluster_2460	Pocillopora_meandrina_HIv1___Sc0000006	5882690	5883493	804	7750	652	0.041935483870967745	-	UGCGUGUAAAAGCUGGUCUCAAGAACC	2130	38	7348	90	17	63	194	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5883592-5884926	Cluster_2461	Pocillopora_meandrina_HIv1___Sc0000006	5883592	5884926	1335	9891	968	0.7129713881306238	.	UGUUACUGUAGAUGGGGUUUCCCUAGC	2212	55	8679	15	83	76	983	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5884948-5885784	Cluster_2462	Pocillopora_meandrina_HIv1___Sc0000006	5884948	5885784	837	5232	832	0.43845565749235477	.	UUUUAUCUCAGGGAAAGCUGCAAAACUG	609	95	4561	45	63	230	238	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5889962-5890386	Cluster_2463	Pocillopora_meandrina_HIv1___Sc0000006	5889962	5890386	425	224	96	1.0	+	UGGUAUCUUCAGGGCUUCUGUCAUUU	36	7	206	0	0	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5890418-5890837	Cluster_2464	Pocillopora_meandrina_HIv1___Sc0000006	5890418	5890837	420	278	119	0.9892086330935251	+	UGGUCUUGAUUGCAGGAAGCAGGUGUUA	27	5	263	2	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5891469-5891892	Cluster_2465	Pocillopora_meandrina_HIv1___Sc0000006	5891469	5891892	424	143	65	1.0	+	UCCUCGCUGCAGCAUCUCUAAUUGUAUGGC	26	0	143	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5891955-5892383	Cluster_2466	Pocillopora_meandrina_HIv1___Sc0000006	5891955	5892383	429	177	94	0.9943502824858758	+	UUGGAUCACAGUUUGUUGCCUCGGACAGGCU	18	2	163	0	5	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5894350-5894781	Cluster_2467	Pocillopora_meandrina_HIv1___Sc0000006	5894350	5894781	432	325	107	0.024615384615384615	-	UGCUCGCUGACAAAGGAAACUCUCACG	54	29	238	0	4	47	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5896720-5897140	Cluster_2468	Pocillopora_meandrina_HIv1___Sc0000006	5896720	5897140	421	146	78	0.9863013698630136	+	UGAUUUUGAAAACUCUGAUGGCUUUUG	16	6	137	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5901952-5902377	Cluster_2469	Pocillopora_meandrina_HIv1___Sc0000006	5901952	5902377	426	186	74	1.0	+	UGUGUAUCUUCUGAGUUUUGAGUUUGAGC	26	3	177	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5902988-5903417	Cluster_2470	Pocillopora_meandrina_HIv1___Sc0000006	5902988	5903417	430	226	89	0.995575221238938	+	UGAAGACAAGGAGAUUGUUGAUGACGUCCGC	19	2	219	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5905245-5905671	Cluster_2471	Pocillopora_meandrina_HIv1___Sc0000006	5905245	5905671	427	181	83	0.9834254143646409	+	UGGAUUUUCAAUUGAUUCUCGAAAUGUUUGG	28	3	175	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5905755-5906180	Cluster_2472	Pocillopora_meandrina_HIv1___Sc0000006	5905755	5906180	426	241	113	0.9875518672199171	+	UCUGACUGAUUACUGCUGUUUCCACUGC	26	7	229	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5907038-5907472	Cluster_2473	Pocillopora_meandrina_HIv1___Sc0000006	5907038	5907472	435	232	90	1.0	+	UCAUUGCGUUGCAUCUUCAGACUUAACUUA	35	5	227	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5908778-5909395	Cluster_2474	Pocillopora_meandrina_HIv1___Sc0000006	5908778	5909395	618	337	152	0.9910979228486647	+	UUUCCAUUGCUUGAACUUGCCGGUUUU	27	13	310	0	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5910612-5911013	Cluster_2475	Pocillopora_meandrina_HIv1___Sc0000006	5910612	5911013	402	286	185	0.08741258741258741	-	UCAAAGUCCAGUAUCCUCUGCGAGUCAGA	11	63	115	9	17	38	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5917575-5918268	Cluster_2476	Pocillopora_meandrina_HIv1___Sc0000006	5917575	5918268	694	1183	200	0.9881656804733728	+	UAGAUUGGAGGAAACUCUUUCUGGCGGG	301	16	1126	1	9	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5920058-5920633	Cluster_2477	Pocillopora_meandrina_HIv1___Sc0000006	5920058	5920633	576	709	306	0.8095909732016925	+	UACCACGUCUAGCUCCUCGUGCUCGCU	41	7	629	2	9	28	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5920652-5921204	Cluster_2478	Pocillopora_meandrina_HIv1___Sc0000006	5920652	5921204	553	243	94	0.8806584362139918	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	29	3	219	2	3	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5922443-5923663	Cluster_2479	Pocillopora_meandrina_HIv1___Sc0000006	5922443	5923663	1221	2049	515	0.8150317227916056	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	482	14	1930	6	13	22	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5926604-5927197	Cluster_2480	Pocillopora_meandrina_HIv1___Sc0000006	5926604	5927197	594	684	275	0.716374269005848	.	UAAAUUGCCAUGUCUAGUAGACCUAUU	33	13	631	7	9	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5927210-5927773	Cluster_2481	Pocillopora_meandrina_HIv1___Sc0000006	5927210	5927773	564	573	234	0.8097731239092496	+	UAAUUUAUCCAUGUAUUCUUGAAGACA	36	7	485	7	23	28	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5928631-5929444	Cluster_2482	Pocillopora_meandrina_HIv1___Sc0000006	5928631	5929444	814	400	236	0.905	+	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	15	4	360	6	2	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5929820-5930249	Cluster_2483	Pocillopora_meandrina_HIv1___Sc0000006	5929820	5930249	430	192	45	0.9635416666666666	+	UGCAAAACCAUGUACAGUCGAACCUUGAUU	44	55	133	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5930401-5930838	Cluster_2484	Pocillopora_meandrina_HIv1___Sc0000006	5930401	5930838	438	1830	194	0.9989071038251366	+	UCCAUUCUGCUCCCACGGUUUGAGGACUUG	369	5	1822	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5931431-5931846	Cluster_2485	Pocillopora_meandrina_HIv1___Sc0000006	5931431	5931846	416	227	110	0.9911894273127754	+	UGUCUUUAACUCUGCCCUAACAAUUCAGAA	21	22	191	6	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5932642-5933123	Cluster_2486	Pocillopora_meandrina_HIv1___Sc0000006	5932642	5933123	482	273	113	0.9963369963369964	+	UCUGCAACGGACUUCUAAGGGGUAAAGGC	47	1	267	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5934311-5935597	Cluster_2487	Pocillopora_meandrina_HIv1___Sc0000006	5934311	5935597	1287	1132	476	0.9929328621908127	+	UGACUUCAUCUGAUCAGUGUUGGUAGAUA	42	51	1032	5	20	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5936238-5937076	Cluster_2488	Pocillopora_meandrina_HIv1___Sc0000006	5936238	5937076	839	964	375	0.9968879668049793	+	UCUUCGUCCUGGAACCAUUUCCUCAUUGA	44	13	931	4	3	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5940921-5941459	Cluster_2489	Pocillopora_meandrina_HIv1___Sc0000006	5940921	5941459	539	8411	405	0.9998811080727619	+	UGUGUCGAGCUUCUCUUGUAGCAGGAGU	3175	78	8202	2	69	29	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5941835-5942272	Cluster_2490	Pocillopora_meandrina_HIv1___Sc0000006	5941835	5942272	438	6761	268	0.9982251146280136	+	UUCUGCUGUUUUGGGCUUGCUUUGCCAUC	3731	53	6650	6	15	20	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5947100-5947529	Cluster_2491	Pocillopora_meandrina_HIv1___Sc0000006	5947100	5947529	430	306	35	1.0	+	UCAAACCUUGGCUUGAAUUACCUAUGCACA	186	1	305	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5948137-5948642	Cluster_2492	Pocillopora_meandrina_HIv1___Sc0000006	5948137	5948642	506	6801	375	0.9988237023967064	+	UGCUUGAUCCUGCUGUAUCUUUUGAAGGGC	2304	11	6748	3	11	19	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5948648-5949058	Cluster_2493	Pocillopora_meandrina_HIv1___Sc0000006	5948648	5949058	411	200	110	0.995	+	UGUCUGAUCUUCUCCUAGAAACAUUUUAGC	10	3	191	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5952244-5952687	Cluster_2494	Pocillopora_meandrina_HIv1___Sc0000006	5952244	5952687	444	271	83	0.1070110701107011	-	ACGUGUAAGAUCAAGGAAGACAUGUUGAUU	58	12	233	1	3	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5956512-5956929	Cluster_2495	Pocillopora_meandrina_HIv1___Sc0000006	5956512	5956929	418	261	150	0.9961685823754789	+	UCUAGAUUCUGGAUUUGCCUGUUCGUCU	19	3	244	3	6	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5959619-5960273	Cluster_2496	Pocillopora_meandrina_HIv1___Sc0000006	5959619	5960273	655	1119	211	0.9195710455764075	+	UAAGUUGAGAGGUCAUAGUAACAUUAGC	132	8	1019	5	7	17	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5960956-5961384	Cluster_2497	Pocillopora_meandrina_HIv1___Sc0000006	5960956	5961384	429	179	58	0.9888268156424581	+	UAGGAUUUCUGUAGCUUGACAAGUUGUAG	45	5	167	3	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5962707-5963125	Cluster_2498	Pocillopora_meandrina_HIv1___Sc0000006	5962707	5963125	419	80	30	1.0	+	UCUUCGUUAGCGUUGUUCGAAAUCUAUAAG	18	0	79	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5970547-5971262	Cluster_2499	Pocillopora_meandrina_HIv1___Sc0000006	5970547	5971262	716	311	137	0.9935691318327974	+	UUCAACGUUAUUUGUCUGGGUCUUUACAGC	33	16	291	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5973250-5973678	Cluster_2500	Pocillopora_meandrina_HIv1___Sc0000006	5973250	5973678	429	316	56	0.9936708860759493	+	UGGGUCUGUGAUUAUGAAGAUGAAAUUC	101	9	302	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5975047-5975816	Cluster_2501	Pocillopora_meandrina_HIv1___Sc0000006	5975047	5975816	770	1031	286	0.9990300678952473	+	UGUAAAAUCUUUUAGGUCUGGCCCUUAUG	128	8	1003	0	3	1	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5977131-5977728	Cluster_2502	Pocillopora_meandrina_HIv1___Sc0000006	5977131	5977728	598	472	163	0.9957627118644068	+	UGUAAACAUCUAAUAACUCCUGCGGAGCAGC	65	10	446	0	5	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5977885-5978419	Cluster_2503	Pocillopora_meandrina_HIv1___Sc0000006	5977885	5978419	535	342	114	0.9824561403508771	+	UCAAACAUUCUUCUGCUCGACUUACUGGC	43	9	319	4	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5978605-5979573	Cluster_2504	Pocillopora_meandrina_HIv1___Sc0000006	5978605	5979573	969	4384	584	0.9781021897810219	+	UCUACCUUAAAUCCCAACUGAUUGCUUUGU	649	106	3895	294	31	20	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5979723-5980153	Cluster_2505	Pocillopora_meandrina_HIv1___Sc0000006	5979723	5980153	431	655	94	0.9954198473282443	+	UGUGUGUUCUAACAGGGUGAUUACUAUAUC	273	40	594	1	2	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5982239-5982887	Cluster_2506	Pocillopora_meandrina_HIv1___Sc0000006	5982239	5982887	649	1027	333	0.7526777020447907	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	81	11	926	3	8	36	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5982943-5983370	Cluster_2507	Pocillopora_meandrina_HIv1___Sc0000006	5982943	5983370	428	367	60	0.005449591280653951	-	ACUGAGAUUCUGGCUGGAUUGUUCCACU	142	1	364	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5983705-5984819	Cluster_2508	Pocillopora_meandrina_HIv1___Sc0000006	5983705	5984819	1115	16797	1626	0.20795380127403704	.	AAAGAUCUGAACCGACGAAUAGUGUAUGGC	2828	132	15535	36	84	216	794	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5990661-5991084	Cluster_2509	Pocillopora_meandrina_HIv1___Sc0000006	5990661	5991084	424	131	60	0.9465648854961832	+	GAUGAAUGGAGAAACGAUAUGACAAC	28	5	72	2	6	6	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6006867-6007294	Cluster_2510	Pocillopora_meandrina_HIv1___Sc0000006	6006867	6007294	428	371	183	1.0	+	UGAUGCUUUCUAGAUGCUGUAACCAAAAC	28	7	349	0	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6007533-6008271	Cluster_2511	Pocillopora_meandrina_HIv1___Sc0000006	6007533	6008271	739	841	367	0.9928656361474435	+	UGUGUCUUGUUGUAACAAUUGUUGCUUUC	43	23	787	2	3	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6008960-6010382	Cluster_2512	Pocillopora_meandrina_HIv1___Sc0000006	6008960	6010382	1423	2145	825	0.9981351981351981	+	UAUCUAUGGAAGUCUGGGCGUCAGAACAUU	127	16	2091	4	7	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6010447-6011701	Cluster_2513	Pocillopora_meandrina_HIv1___Sc0000006	6010447	6011701	1255	7032	1164	0.9712741751990899	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1437	40	6685	23	47	95	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6012871-6014174	Cluster_2514	Pocillopora_meandrina_HIv1___Sc0000006	6012871	6014174	1304	1405	455	0.9950177935943061	+	UGUAUACGUAGUGUCCGAUCUAAAUCCUGA	120	23	1366	2	3	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6014790-6015197	Cluster_2515	Pocillopora_meandrina_HIv1___Sc0000006	6014790	6015197	408	233	148	0.9957081545064378	+	UCAUCUUCAGAAGACUUCUCCGACACUGC	16	2	227	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6016384-6016812	Cluster_2516	Pocillopora_meandrina_HIv1___Sc0000006	6016384	6016812	429	239	65	0.9037656903765691	+	UGGAUUUUAAAUCGUACAUACCUUCUUA	47	4	211	1	9	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6018479-6018907	Cluster_2517	Pocillopora_meandrina_HIv1___Sc0000006	6018479	6018907	429	364	155	0.8159340659340659	+	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	93	7	325	3	12	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6019579-6022030	Cluster_2518	Pocillopora_meandrina_HIv1___Sc0000006	6019579	6022030	2452	11932	3031	0.9603586992960107	+	UGAGGACUUUUCAAAUUUAGCUACAGAUU	499	141	10962	62	87	153	527	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6023232-6024969	Cluster_2519	Pocillopora_meandrina_HIv1___Sc0000006	6023232	6024969	1738	2752	1103	0.953125	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	89	29	2603	9	23	49	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6031801-6032221	Cluster_2520	Pocillopora_meandrina_HIv1___Sc0000006	6031801	6032221	421	185	73	0.9513513513513514	+	UCAUCCUUGACUCCAGAAUGCUGAAGCA	17	14	165	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6032361-6032926	Cluster_2521	Pocillopora_meandrina_HIv1___Sc0000006	6032361	6032926	566	433	190	0.9099307159353349	+	UGUGGUAGACUUGUUUUUGACAUGGCA	40	17	388	3	1	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6042598-6043626	Cluster_2522	Pocillopora_meandrina_HIv1___Sc0000006	6042598	6043626	1029	587	202	0.9931856899488927	+	UCGUUUGUUCCGAGGAUAAGAUGUACA	86	12	565	2	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6044864-6045288	Cluster_2523	Pocillopora_meandrina_HIv1___Sc0000006	6044864	6045288	425	156	69	1.0	+	UAGGUUAUUGGCAGUGUCUCUUCGAAAAGA	27	5	143	1	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6045497-6046369	Cluster_2524	Pocillopora_meandrina_HIv1___Sc0000006	6045497	6046369	873	526	167	0.9980988593155894	+	CUCUGCUGACUGCAGGACCUUCCUUGC	112	4	508	3	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6067017-6067447	Cluster_2525	Pocillopora_meandrina_HIv1___Sc0000006	6067017	6067447	431	877	179	1.0	+	UUCCUGUACGAUAACACUUAGGUUGCGCA	134	100	744	9	11	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6070242-6070679	Cluster_2526	Pocillopora_meandrina_HIv1___Sc0000006	6070242	6070679	438	830	268	0.9614457831325302	+	UGCGUGACGAUCAAGAACUUGAGAGAGUGU	135	4	794	4	4	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6071058-6072232	Cluster_2527	Pocillopora_meandrina_HIv1___Sc0000006	6071058	6072232	1175	2529	557	0.6243574535389482	.	GAUCUCUUGAAAUGUUCGGAAUUAUGUGG	245	38	2398	33	5	27	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6088167-6088582	Cluster_2528	Pocillopora_meandrina_HIv1___Sc0000006	6088167	6088582	416	91	23	0.8131868131868132	+	GAAGUUCUGGUUUAAA	56	75	14	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6120475-6121105	Cluster_2529	Pocillopora_meandrina_HIv1___Sc0000006	6120475	6121105	631	1074	249	0.00558659217877095	-	UACUCUUCGCCAGACGUUUUCCGUACCGAU	148	19	1031	5	7	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6121458-6121887	Cluster_2530	Pocillopora_meandrina_HIv1___Sc0000006	6121458	6121887	430	236	72	0.0	-	UGCGAUUGAAGCUGCUGGGAGACACAAGUG	45	8	211	5	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6207674-6208092	Cluster_2531	Pocillopora_meandrina_HIv1___Sc0000006	6207674	6208092	419	704	38	0.009943181818181818	-	AACUUUUGACGGUGGGU	172	704	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6278811-6279259	Cluster_2532	Pocillopora_meandrina_HIv1___Sc0000006	6278811	6279259	449	993	159	0.3907351460221551	.	UUCUAGCUCGACUUCACGCU	218	509	59	99	298	26	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6286308-6286741	Cluster_2533	Pocillopora_meandrina_HIv1___Sc0000006	6286308	6286741	434	719	217	0.004172461752433936	-	UGUGUUGCAAUGGCGACGAACAUUG	141	85	553	21	13	15	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6499330-6499750	Cluster_2534	Pocillopora_meandrina_HIv1___Sc0000006	6499330	6499750	421	98	52	0.0	-	UCAGUAAGGAUGGAAACUCUUGGA	12	9	43	5	5	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6643445-6643859	Cluster_2535	Pocillopora_meandrina_HIv1___Sc0000006	6643445	6643859	415	197	3	0.9949238578680203	+	AGGAGAACGUAGGGU	195	197	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6686048-6686463	Cluster_2536	Pocillopora_meandrina_HIv1___Sc0000006	6686048	6686463	416	101	15	1.0	+	GUGUGUCUCUCUGUCU	57	99	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6768801-6769851	Cluster_2537	Pocillopora_meandrina_HIv1___Sc0000006	6768801	6769851	1051	737	350	0.7611940298507462	.	UCUUCCUGUUCUGUACUGAAACCAGUC	28	5	687	3	6	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6770112-6770541	Cluster_2538	Pocillopora_meandrina_HIv1___Sc0000006	6770112	6770541	430	635	212	0.9086614173228347	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	93	5	565	2	2	4	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6812246-6812661	Cluster_2539	Pocillopora_meandrina_HIv1___Sc0000006	6812246	6812661	416	100	48	0.99	+	UCCCACAUGGUCUAGUGGUUAGGAUUCA	16	24	68	2	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6838768-6839198	Cluster_2540	Pocillopora_meandrina_HIv1___Sc0000006	6838768	6839198	431	879	145	0.0011376564277588168	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	176	227	626	1	16	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6858520-6858950	Cluster_2541	Pocillopora_meandrina_HIv1___Sc0000006	6858520	6858950	431	441	100	1.0	+	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	88	132	296	1	8	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6875416-6875831	Cluster_2542	Pocillopora_meandrina_HIv1___Sc0000006	6875416	6875831	416	89	10	0.011235955056179775	-	CUUAUGAAUGGUGGAUU	42	89	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6907945-6908359	Cluster_2543	Pocillopora_meandrina_HIv1___Sc0000006	6907945	6908359	415	170	48	0.7294117647058823	.	CGCCGCCGUCGCACA	55	144	10	3	5	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7024118-7024547	Cluster_2544	Pocillopora_meandrina_HIv1___Sc0000006	7024118	7024547	430	259	57	0.007722007722007722	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	79	1	258	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7083119-7083521	Cluster_2545	Pocillopora_meandrina_HIv1___Sc0000006	7083119	7083521	403	189	138	0.0	-	CUUGUUGGAAAAUAUGGCGGU	8	42	75	23	21	20	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7121573-7121989	Cluster_2546	Pocillopora_meandrina_HIv1___Sc0000006	7121573	7121989	417	161	29	0.8881987577639752	+	CUUUGGUGGAGAUGGAU	33	143	12	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7261372-7261772	Cluster_2547	Pocillopora_meandrina_HIv1___Sc0000006	7261372	7261772	401	164	134	0.006097560975609756	-	GUAUUUUAAAUUGUGAACGGUUU	3	34	57	14	20	21	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7262299-7262700	Cluster_2548	Pocillopora_meandrina_HIv1___Sc0000006	7262299	7262700	402	223	176	0.004484304932735426	-	GGAAGUUGGCAGUGAACA	5	70	87	16	18	15	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7264399-7264807	Cluster_2549	Pocillopora_meandrina_HIv1___Sc0000006	7264399	7264807	409	383	292	0.0026109660574412533	-	CACCGAAGGAGCCGAAUUGGUAGACU	5	121	148	30	25	29	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7265080-7265496	Cluster_2550	Pocillopora_meandrina_HIv1___Sc0000006	7265080	7265496	417	158	132	0.0	-	UUCAUCUUCAGGCUGGCC	3	56	63	7	14	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7496273-7496769	Cluster_2551	Pocillopora_meandrina_HIv1___Sc0000006	7496273	7496769	497	572	178	0.6363636363636364	.	UGCGAUUACAGAGGUGCGUUGGAACUCC	147	19	517	4	8	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7599358-7599934	Cluster_2552	Pocillopora_meandrina_HIv1___Sc0000006	7599358	7599934	577	493	228	0.9350912778904665	+	UGUUUGUAGCACGUCCAGUCUGUUGGAGC	30	42	427	1	3	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7600647-7601066	Cluster_2553	Pocillopora_meandrina_HIv1___Sc0000006	7600647	7601066	420	155	95	0.9935483870967742	+	UGUGUGUUGGAUCCGAGCUCGUAUACACC	8	10	139	1	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7637910-7638338	Cluster_2554	Pocillopora_meandrina_HIv1___Sc0000006	7637910	7638338	429	147	54	0.02040816326530612	-	UGUAUCUUCAGUAUCUUCGUCGCCAGAGC	42	4	139	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7689856-7690284	Cluster_2555	Pocillopora_meandrina_HIv1___Sc0000006	7689856	7690284	429	91	22	0.02197802197802198	-	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	55	0	90	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7697231-7697657	Cluster_2556	Pocillopora_meandrina_HIv1___Sc0000006	7697231	7697657	427	182	86	0.005494505494505495	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	16	5	166	1	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7786884-7787312	Cluster_2557	Pocillopora_meandrina_HIv1___Sc0000006	7786884	7787312	429	340	224	0.011764705882352941	-	CUCUUGUUGACGGUCUGAAGAGAGCAACA	47	85	164	27	22	24	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7790782-7791185	Cluster_2558	Pocillopora_meandrina_HIv1___Sc0000006	7790782	7791185	404	165	118	0.03636363636363636	-	UCAAGGUCAUCAUGCAGAAC	6	58	69	8	11	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7906356-7906770	Cluster_2559	Pocillopora_meandrina_HIv1___Sc0000006	7906356	7906770	415	90	11	0.03333333333333333	-	UGGCCCAGCUGUGAU	74	88	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7908828-7909247	Cluster_2560	Pocillopora_meandrina_HIv1___Sc0000006	7908828	7909247	420	166	80	0.0	-	GAUAUUCUUGAUUCUGAAAACA	16	75	39	6	26	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7910927-7911409	Cluster_2561	Pocillopora_meandrina_HIv1___Sc0000006	7910927	7911409	483	2806	475	0.0003563791874554526	-	CCAUGUUGGUGUGGUCUGAUGAACUGAAAGU	205	544	1522	243	262	132	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7912046-7912475	Cluster_2562	Pocillopora_meandrina_HIv1___Sc0000006	7912046	7912475	430	440	109	0.0	-	UUCAGUGUUGAACUGUUCACAUUCUGAAAA	110	75	325	23	8	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7912843-7913321	Cluster_2563	Pocillopora_meandrina_HIv1___Sc0000006	7912843	7913321	479	3062	406	0.0016329196603527107	-	CCUAAUGAUGUUUGGUCUGAUGAACUGAAA	318	207	2410	88	66	88	203	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7973844-7974259	Cluster_2564	Pocillopora_meandrina_HIv1___Sc0000006	7973844	7974259	416	233	65	0.9356223175965666	+	UGUAUCCCAACCAAGU	144	149	72	3	1	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8173663-8174078	Cluster_2565	Pocillopora_meandrina_HIv1___Sc0000006	8173663	8174078	416	207	61	0.9710144927536232	+	UGUAUCCCAACCAAGU	130	132	69	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8391070-8391499	Cluster_2566	Pocillopora_meandrina_HIv1___Sc0000006	8391070	8391499	430	2111	98	0.0	-	UUCUCUCGAACAUUUUACUAUUUAGGUACC	699	11	1962	1	4	129	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8533930-8534360	Cluster_2567	Pocillopora_meandrina_HIv1___Sc0000006	8533930	8534360	431	148	54	0.0472972972972973	-	UCGAUUCCGCGAUGACUACAAUACGUUCUGC	45	6	139	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8556069-8556565	Cluster_2568	Pocillopora_meandrina_HIv1___Sc0000006	8556069	8556565	497	319	228	0.0	-	GGCAGAACUAUGUAAGAACAU	10	101	116	30	18	30	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8710636-8711050	Cluster_2569	Pocillopora_meandrina_HIv1___Sc0000006	8710636	8711050	415	152	26	0.9342105263157895	+	UGAGACUUGAAGCGU	61	143	4	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8844897-8845324	Cluster_2570	Pocillopora_meandrina_HIv1___Sc0000006	8844897	8845324	428	431	23	0.9976798143851509	+	UCGGUUCUUAAAAAAAAAAAAAAAAAA	94	2	380	5	3	7	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8888821-8889249	Cluster_2571	Pocillopora_meandrina_HIv1___Sc0000006	8888821	8889249	429	88	7	0.011363636363636364	-	UGAUAAUCCAAAUUCUUGCGCCUACACAUU	72	1	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9039512-9039983	Cluster_2572	Pocillopora_meandrina_HIv1___Sc0000006	9039512	9039983	472	903	111	0.9988925802879292	+	GCCCGGUUAGCUCAGUC	260	629	248	7	3	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9046560-9046990	Cluster_2573	Pocillopora_meandrina_HIv1___Sc0000006	9046560	9046990	431	3271	259	0.001528584530724549	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	769	991	2174	10	68	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9050405-9050859	Cluster_2574	Pocillopora_meandrina_HIv1___Sc0000006	9050405	9050859	455	553	81	1.0	+	GGUCCGUUAGCUCAG	151	361	98	20	16	24	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9100122-9100616	Cluster_2575	Pocillopora_meandrina_HIv1___Sc0000006	9100122	9100616	495	4370	1056	0.0038901601830663617	-	GUUUAUCCGAGGCGCGGUUAUUGCUGA	136	1839	1352	261	240	279	399	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9100951-9101407	Cluster_2576	Pocillopora_meandrina_HIv1___Sc0000006	9100951	9101407	457	401	136	1.0	+	UAUUGACUUUUAAAUUUCUCCAGAACGGUG	35	15	338	7	7	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9202498-9202981	Cluster_2577	Pocillopora_meandrina_HIv1___Sc0000006	9202498	9202981	484	3565	333	0.9985974754558204	+	UGCCCAAUGAUUAUCUAUGUUGAACACU	518	1043	2154	56	124	67	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9311554-9311977	Cluster_2578	Pocillopora_meandrina_HIv1___Sc0000006	9311554	9311977	424	340	50	0.0029411764705882353	-	UGUCUAUUCCAGGUAACCUCUGAU	167	11	48	13	3	31	234	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9331637-9332053	Cluster_2579	Pocillopora_meandrina_HIv1___Sc0000006	9331637	9332053	417	168	35	1.0	+	AUCGGCCGUGGAUUGC	27	163	3	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9416139-9416555	Cluster_2580	Pocillopora_meandrina_HIv1___Sc0000006	9416139	9416555	417	2305	73	0.0004338394793926247	-	UUUGUUCUAAGAUUUGU	1039	2291	0	14	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9517732-9518155	Cluster_2581	Pocillopora_meandrina_HIv1___Sc0000006	9517732	9518155	424	462	27	1.0	+	AGUUUUGGUGUUCUUCUGUGUG	208	27	61	3	311	32	28	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9565153-9565579	Cluster_2582	Pocillopora_meandrina_HIv1___Sc0000006	9565153	9565579	427	194	115	0.8917525773195877	+	UGAGUCGAGGUUAUUCACAAUACGAGC	34	5	174	4	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9591535-9591944	Cluster_2583	Pocillopora_meandrina_HIv1___Sc0000006	9591535	9591944	410	95	40	0.4421052631578947	.	UAGAACUUGGAUGAUGGGGAGUCAUGCC	19	4	86	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9632564-9632985	Cluster_2584	Pocillopora_meandrina_HIv1___Sc0000006	9632564	9632985	422	124	19	1.0	+	AGUUUUGGUGUCCUCCUCUGUG	43	3	48	3	67	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9708115-9708565	Cluster_2585	Pocillopora_meandrina_HIv1___Sc0000006	9708115	9708565	451	287	140	0.8989547038327527	+	AGUUGACAUAUUGACUGGUACAAACAAGGG	28	21	185	8	8	24	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9738230-9738656	Cluster_2586	Pocillopora_meandrina_HIv1___Sc0000006	9738230	9738656	427	297	106	0.7575757575757576	.	UUGGAACGUGUUGCUGAACGCUUGCU	39	26	254	4	5	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9755872-9756300	Cluster_2587	Pocillopora_meandrina_HIv1___Sc0000006	9755872	9756300	429	254	28	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	98	0	252	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9769645-9770074	Cluster_2588	Pocillopora_meandrina_HIv1___Sc0000006	9769645	9770074	430	269	29	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	101	0	264	0	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9790676-9791956	Cluster_2589	Pocillopora_meandrina_HIv1___Sc0000006	9790676	9791956	1281	3348	882	0.046296296296296294	-	UCUUCGCUGAUUUCUUCCCACAGGGACU	248	15	3270	4	6	16	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9792784-9793185	Cluster_2590	Pocillopora_meandrina_HIv1___Sc0000006	9792784	9793185	402	182	110	0.6373626373626373	.	UGCAAACUCGUCUGUAGACUCUGUACG	25	3	176	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9808992-9809421	Cluster_2591	Pocillopora_meandrina_HIv1___Sc0000006	9808992	9809421	430	265	34	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	90	0	263	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9830659-9831089	Cluster_2592	Pocillopora_meandrina_HIv1___Sc0000006	9830659	9831089	431	366	183	0.9726775956284153	+	UUGGAACUUCAGCUGUGAGACGCAGG	18	11	327	2	1	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9833547-9833990	Cluster_2593	Pocillopora_meandrina_HIv1___Sc0000006	9833547	9833990	444	886	199	0.59255079006772	.	CCUGAUCGUAAAGACAAACUGCGUG	161	6	783	5	6	19	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9837502-9837929	Cluster_2594	Pocillopora_meandrina_HIv1___Sc0000006	9837502	9837929	428	182	54	0.9230769230769231	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	35	8	167	2	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9852912-9853356	Cluster_2595	Pocillopora_meandrina_HIv1___Sc0000006	9852912	9853356	445	373	129	0.11796246648793565	-	UGAGACAGUACACACGAUUUGAUAU	39	1	355	0	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9873510-9873939	Cluster_2596	Pocillopora_meandrina_HIv1___Sc0000006	9873510	9873939	430	295	37	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	105	0	290	2	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9887216-9887645	Cluster_2597	Pocillopora_meandrina_HIv1___Sc0000006	9887216	9887645	430	274	32	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	87	1	269	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9909109-9909538	Cluster_2598	Pocillopora_meandrina_HIv1___Sc0000006	9909109	9909538	430	282	34	0.9964539007092199	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	103	2	274	1	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9925611-9926032	Cluster_2599	Pocillopora_meandrina_HIv1___Sc0000006	9925611	9926032	422	80	30	0.9625	+	UCAGAUUAUGGAACCGCCAACUUUAUGC	16	4	71	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9926159-9926587	Cluster_2600	Pocillopora_meandrina_HIv1___Sc0000006	9926159	9926587	429	286	45	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	111	0	281	0	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10292062-10292488	Cluster_2601	Pocillopora_meandrina_HIv1___Sc0000006	10292062	10292488	427	225	35	0.9688888888888889	+	UGAACUACUGCUCGUACUCUAGAUAGG	120	42	172	4	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10378721-10379135	Cluster_2602	Pocillopora_meandrina_HIv1___Sc0000006	10378721	10379135	415	232	22	0.02586206896551724	-	AUGUCGGCUCUUCCA	96	226	5	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10393246-10393675	Cluster_2603	Pocillopora_meandrina_HIv1___Sc0000006	10393246	10393675	430	206	47	1.0	+	UGCAAAGAUGUCAGUCAAGAAUAGCCGAGC	75	3	201	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10460853-10461280	Cluster_2604	Pocillopora_meandrina_HIv1___Sc0000006	10460853	10461280	428	217	106	0.783410138248848	.	UGAGACAUUUUGAGACACUCGUGAGACA	24	5	185	2	1	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10713315-10713742	Cluster_2605	Pocillopora_meandrina_HIv1___Sc0000006	10713315	10713742	428	145	49	0.9862068965517241	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	46	1	141	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10793623-10794051	Cluster_2606	Pocillopora_meandrina_HIv1___Sc0000006	10793623	10794051	429	109	20	0.03669724770642202	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	49	4	104	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10813254-10813663	Cluster_2607	Pocillopora_meandrina_HIv1___Sc0000006	10813254	10813663	410	129	60	0.9612403100775194	+	UGUUUACUUUCUUUACAACUUCGGAUACGGG	26	0	125	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10896001-10896432	Cluster_2608	Pocillopora_meandrina_HIv1___Sc0000006	10896001	10896432	432	2826	138	0.012031139419674451	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2109	10	2785	19	6	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10969065-10969550	Cluster_2609	Pocillopora_meandrina_HIv1___Sc0000006	10969065	10969550	486	259	98	0.43243243243243246	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	48	21	225	1	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11034948-11035388	Cluster_2610	Pocillopora_meandrina_HIv1___Sc0000006	11034948	11035388	441	268	154	1.0	+	GCUGAUUGAAAACUUUUCCCAAUA	11	135	66	16	17	9	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11092821-11093342	Cluster_2611	Pocillopora_meandrina_HIv1___Sc0000006	11092821	11093342	522	216	62	0.05555555555555555	-	UCAACAUGUCUUCCUUUGUCUUACACGUG	50	0	214	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11121673-11122194	Cluster_2612	Pocillopora_meandrina_HIv1___Sc0000006	11121673	11122194	522	200	58	0.05	-	UCAACAUGUCUUCCUUUGUCUUACACGUG	43	2	195	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11148434-11149390	Cluster_2613	Pocillopora_meandrina_HIv1___Sc0000006	11148434	11149390	957	2010	327	0.023880597014925373	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	309	16	1933	0	2	43	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11166873-11167506	Cluster_2614	Pocillopora_meandrina_HIv1___Sc0000006	11166873	11167506	634	7681	543	0.06861085796120296	-	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	4018	57	7453	22	7	36	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11167825-11168374	Cluster_2615	Pocillopora_meandrina_HIv1___Sc0000006	11167825	11168374	550	215	74	0.06046511627906977	-	UAUACUCCAAAGGUUCUGAAAACGAAUG	39	2	196	1	3	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11206362-11206836	Cluster_2616	Pocillopora_meandrina_HIv1___Sc0000006	11206362	11206836	475	8005	769	0.9893816364772018	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	3037	1030	6633	108	106	82	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11371010-11371535	Cluster_2617	Pocillopora_meandrina_HIv1___Sc0000006	11371010	11371535	526	667	241	0.15292353823088456	-	UGUAAGAUCUGUAGCCUUGGUUUGCCGAC	87	51	548	11	9	20	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11373785-11374213	Cluster_2618	Pocillopora_meandrina_HIv1___Sc0000006	11373785	11374213	429	344	143	0.0	-	UCUUUCUUAAAACGGAACGUGUACUUGAA	36	8	324	3	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11374488-11374890	Cluster_2619	Pocillopora_meandrina_HIv1___Sc0000006	11374488	11374890	403	198	90	0.025252525252525252	-	CGCAGCGCGUGCCUCC	44	49	141	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11375457-11375959	Cluster_2620	Pocillopora_meandrina_HIv1___Sc0000006	11375457	11375959	503	1120	280	0.004464285714285714	-	UCCGACUCGUGCGACACGACAUCUCUUGAU	148	8	1092	2	2	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11376313-11378491	Cluster_2621	Pocillopora_meandrina_HIv1___Sc0000006	11376313	11378491	2179	112903	3143	0.004065436702301976	-	UGAUCUUCUUGAAUUUGCCCAUUUACAAUA	26498	498	110403	86	191	794	931	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11378588-11379259	Cluster_2622	Pocillopora_meandrina_HIv1___Sc0000006	11378588	11379259	672	1818	317	0.006600660066006601	-	UGAUUCUUUGACAGUUAACCCUAGUAG	208	27	1573	80	26	99	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11380054-11380801	Cluster_2623	Pocillopora_meandrina_HIv1___Sc0000006	11380054	11380801	748	2326	483	0.01117798796216681	-	UCAAGAUCUUCCUCUUUGUCGUACCCGGA	435	24	2219	5	18	35	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11380827-11381266	Cluster_2624	Pocillopora_meandrina_HIv1___Sc0000006	11380827	11381266	440	400	180	0.075	-	UGCUCAUAAUUGUGUGAACCUCAGACACCC	31	12	360	1	22	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11381692-11382373	Cluster_2625	Pocillopora_meandrina_HIv1___Sc0000006	11381692	11382373	682	498	199	0.008032128514056224	-	UGGCCAUUCAUCUAUUGAAAUGAACUUCGAU	124	30	452	0	4	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11384910-11385866	Cluster_2626	Pocillopora_meandrina_HIv1___Sc0000006	11384910	11385866	957	1164	417	0.005154639175257732	-	UCUGAUUUGGUAAUUGACUUGGCUGGUCC	58	56	1037	3	17	18	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11385947-11386367	Cluster_2627	Pocillopora_meandrina_HIv1___Sc0000006	11385947	11386367	421	134	53	0.007462686567164179	-	UCUUGAAAUUCUAGACUCUUGGAAAUGCA	55	3	129	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11389023-11390063	Cluster_2628	Pocillopora_meandrina_HIv1___Sc0000006	11389023	11390063	1041	6798	746	0.013533392174168874	-	UGCACUCUUUCCUUGAGAAGUUCCUGGAA	2619	149	6488	32	25	24	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11390733-11391386	Cluster_2629	Pocillopora_meandrina_HIv1___Sc0000006	11390733	11391386	654	1904	369	0.011554621848739496	-	UAAAAUCCGAAAAAUUCGAAAUGGAAGGCUG	1132	26	1827	8	4	20	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11393309-11393718	Cluster_2630	Pocillopora_meandrina_HIv1___Sc0000006	11393309	11393718	410	178	77	0.3651685393258427	.	UCCAUACAAACACAGUAAAUUGGCCGAA	19	3	162	1	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11430683-11431107	Cluster_2631	Pocillopora_meandrina_HIv1___Sc0000006	11430683	11431107	425	243	63	0.01646090534979424	-	CGGUGACAAAUAUCAACUAUGGCA	48	23	86	11	2	61	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11491586-11492016	Cluster_2632	Pocillopora_meandrina_HIv1___Sc0000006	11491586	11492016	431	824	90	0.9235436893203883	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	304	9	804	0	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11529775-11530193	Cluster_2633	Pocillopora_meandrina_HIv1___Sc0000006	11529775	11530193	419	168	12	0.0	-	CGGCUUGAAAAAAAAAAAA	78	166	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11542082-11543575	Cluster_2634	Pocillopora_meandrina_HIv1___Sc0000006	11542082	11543575	1494	1335	539	0.10411985018726591	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	82	18	1261	3	7	14	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11544446-11544872	Cluster_2635	Pocillopora_meandrina_HIv1___Sc0000006	11544446	11544872	427	118	47	0.11016949152542373	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	50	0	113	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11544956-11545382	Cluster_2636	Pocillopora_meandrina_HIv1___Sc0000006	11544956	11545382	427	337	131	0.06231454005934718	-	UCCAAUCACACACAGUUCUCCUGCGGC	92	1	315	2	3	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11545757-11546165	Cluster_2637	Pocillopora_meandrina_HIv1___Sc0000006	11545757	11546165	409	238	108	0.04201680672268908	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	25	2	222	1	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11546414-11546826	Cluster_2638	Pocillopora_meandrina_HIv1___Sc0000006	11546414	11546826	413	227	109	0.039647577092511016	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	23	2	217	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11548311-11548726	Cluster_2639	Pocillopora_meandrina_HIv1___Sc0000006	11548311	11548726	416	941	57	0.9659936238044633	+	CCGUGUUGUAGGCUA	429	920	12	3	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11581144-11581561	Cluster_2640	Pocillopora_meandrina_HIv1___Sc0000006	11581144	11581561	418	525	49	0.011428571428571429	-	CCCGGGUCUCGGCACCA	308	523	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11672350-11672776	Cluster_2641	Pocillopora_meandrina_HIv1___Sc0000006	11672350	11672776	427	155	84	0.0	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	33	14	122	7	3	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11677885-11678302	Cluster_2642	Pocillopora_meandrina_HIv1___Sc0000006	11677885	11678302	418	103	48	0.14563106796116504	-	UCAGAGCAAGAACGACCCCU	21	81	9	9	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11680009-11680439	Cluster_2643	Pocillopora_meandrina_HIv1___Sc0000006	11680009	11680439	431	325	153	0.052307692307692305	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	20	5	310	0	2	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11680461-11680876	Cluster_2644	Pocillopora_meandrina_HIv1___Sc0000006	11680461	11680876	416	220	131	0.10909090909090909	-	UAUCCUUAAUCUUGAUGGCUCGAGACGU	14	7	196	0	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11683540-11683967	Cluster_2645	Pocillopora_meandrina_HIv1___Sc0000006	11683540	11683967	428	91	23	0.02197802197802198	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	0	88	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11760004-11760609	Cluster_2646	Pocillopora_meandrina_HIv1___Sc0000006	11760004	11760609	606	2839	304	0.9855582951743571	+	UGAACCGUGCCGAUCUGCUGCCCUUUGA	649	9	2796	6	5	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11762420-11762901	Cluster_2647	Pocillopora_meandrina_HIv1___Sc0000006	11762420	11762901	482	396	75	0.7272727272727273	.	UCCGAAGCCUCGUUUGUAGUCG	102	11	227	0	152	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11810098-11810513	Cluster_2648	Pocillopora_meandrina_HIv1___Sc0000006	11810098	11810513	416	157	13	0.006369426751592357	-	UACCUGGUUGAUCCUA	59	156	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11811248-11811667	Cluster_2649	Pocillopora_meandrina_HIv1___Sc0000006	11811248	11811667	420	501	11	0.998003992015968	+	UUCCGAAUCUUCUAGUUAGC	386	454	1	37	8	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11830883-11831300	Cluster_2650	Pocillopora_meandrina_HIv1___Sc0000006	11830883	11831300	418	186	16	0.7580645161290323	.	GAUGGAUGGAGACUGCUU	101	181	4	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11993972-11994632	Cluster_2651	Pocillopora_meandrina_HIv1___Sc0000006	11993972	11994632	661	1452	218	0.9986225895316805	+	UUACAUUUGCGACUUCUUCAGAUUGCGAGC	257	96	1240	11	29	47	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12057156-12057627	Cluster_2652	Pocillopora_meandrina_HIv1___Sc0000006	12057156	12057627	472	840	225	1.0	+	UGAGACGAAGCACACCGACAUUU	169	87	339	11	37	244	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12087516-12088787	Cluster_2653	Pocillopora_meandrina_HIv1___Sc0000006	12087516	12088787	1272	1264	508	0.08623417721518987	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	79	17	1191	3	5	12	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12089657-12090084	Cluster_2654	Pocillopora_meandrina_HIv1___Sc0000006	12089657	12090084	428	133	47	0.05263157894736842	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	61	0	127	0	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12090168-12090594	Cluster_2655	Pocillopora_meandrina_HIv1___Sc0000006	12090168	12090594	427	312	134	0.10576923076923077	-	UCCAAUCACACACAGUUCUCCUGCGGC	58	5	294	1	1	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12090969-12091604	Cluster_2656	Pocillopora_meandrina_HIv1___Sc0000006	12090969	12091604	636	1619	410	0.04323656578134651	-	UGUUACCGGUCUUGCUAACCACUUGGA	385	16	1523	3	12	12	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12175321-12175749	Cluster_2657	Pocillopora_meandrina_HIv1___Sc0000006	12175321	12175749	429	669	71	0.005979073243647235	-	UGAAGACUGGCCCUGAUAUCAUCAUAU	182	2	641	1	0	20	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12347661-12348078	Cluster_2658	Pocillopora_meandrina_HIv1___Sc0000006	12347661	12348078	418	183	13	0.994535519125683	+	GAGGACAGUCGCAGCGCA	107	183	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12365266-12365693	Cluster_2659	Pocillopora_meandrina_HIv1___Sc0000006	12365266	12365693	428	86	29	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	48	1	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12369619-12370050	Cluster_2660	Pocillopora_meandrina_HIv1___Sc0000006	12369619	12370050	432	358	149	0.06983240223463687	-	UGUUUUGGUGUGUUCAAGUAUCUUUGA	26	7	344	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12374555-12375050	Cluster_2661	Pocillopora_meandrina_HIv1___Sc0000006	12374555	12375050	496	2241	190	0.21686746987951808	.	UCCAUCUGUCAGAAAUCCAAACAUGUCUUC	825	1	2201	3	8	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12376022-12376452	Cluster_2662	Pocillopora_meandrina_HIv1___Sc0000006	12376022	12376452	431	719	66	0.030598052851182198	-	UGAAAUGACGAUCACUGAUGAAUCCUUUGUC	317	8	672	12	2	21	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12377153-12377581	Cluster_2663	Pocillopora_meandrina_HIv1___Sc0000006	12377153	12377581	429	205	43	0.9560975609756097	+	AUCUUUCCGAGGCUCUGAGUGGG	43	4	84	13	18	67	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12377822-12378634	Cluster_2664	Pocillopora_meandrina_HIv1___Sc0000006	12377822	12378634	813	860	252	0.07790697674418605	-	UCUACUUUGUUGGAUUCACACUGGAUCUUGU	242	13	781	5	10	15	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12380734-12383188	Cluster_2665	Pocillopora_meandrina_HIv1___Sc0000006	12380734	12383188	2455	11984	3096	0.038551401869158876	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	432	173	10949	61	100	181	520	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12383856-12384284	Cluster_2666	Pocillopora_meandrina_HIv1___Sc0000006	12383856	12384284	429	403	167	0.24069478908188585	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	100	2	365	4	11	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12391128-12391714	Cluster_2667	Pocillopora_meandrina_HIv1___Sc0000006	12391128	12391714	587	467	201	0.37259100642398285	.	CAGGAAUGUAGUGCUGAACAACC	29	10	339	21	14	54	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12400733-12401399	Cluster_2668	Pocillopora_meandrina_HIv1___Sc0000006	12400733	12401399	667	3293	691	0.26116003644093533	.	UUUAUACCCAAUACGAUCUUAUCUCUGA	277	27	3139	9	15	45	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12401670-12402081	Cluster_2669	Pocillopora_meandrina_HIv1___Sc0000006	12401670	12402081	412	227	138	0.16299559471365638	-	UGACGUAACUUUUCCAAUGAACUUAACGA	13	9	194	3	6	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12402282-12403351	Cluster_2670	Pocillopora_meandrina_HIv1___Sc0000006	12402282	12403351	1070	3694	651	0.07904710341093665	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	476	21	3520	10	11	30	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12403748-12404424	Cluster_2671	Pocillopora_meandrina_HIv1___Sc0000006	12403748	12404424	677	257	136	0.10894941634241245	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	24	5	238	4	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12407957-12408583	Cluster_2672	Pocillopora_meandrina_HIv1___Sc0000006	12407957	12408583	627	292	108	0.00684931506849315	-	UCUAUUCUCAAGCUUUUUGUAGCCCGCUGAU	51	2	287	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12418249-12419391	Cluster_2673	Pocillopora_meandrina_HIv1___Sc0000006	12418249	12419391	1143	6631	1317	0.007992761272809531	-	UGUGCAUUCAGGUUUGUCAUUGUCAAUAAC	559	47	6278	22	90	140	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12419449-12420504	Cluster_2674	Pocillopora_meandrina_HIv1___Sc0000006	12419449	12420504	1056	1978	735	0.01314459049544995	-	UGGGAACAUCUUUGAAGUCAUUUUUAUG	69	38	1846	15	26	28	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12421401-12424357	Cluster_2675	Pocillopora_meandrina_HIv1___Sc0000006	12421401	12424357	2957	42206	3140	0.04624934843387196	-	UGAUCAUGGAUUCUAAACUGGUAAUGGCC	13283	715	39744	531	136	421	659	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12425669-12428587	Cluster_2676	Pocillopora_meandrina_HIv1___Sc0000006	12425669	12428587	2919	14080	2610	0.001065340909090909	-	UUCAUUCUGAGCACGGACCCUCUUGGACGUU	1264	259	13005	43	416	53	304	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12429120-12429549	Cluster_2677	Pocillopora_meandrina_HIv1___Sc0000006	12429120	12429549	430	252	120	0.0	-	UGAGAAGAUCUUUUAUUCGUCGCGGCCAUU	51	2	246	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12430411-12430838	Cluster_2678	Pocillopora_meandrina_HIv1___Sc0000006	12430411	12430838	428	239	87	0.0041841004184100415	-	UGGGUGUAGUGCUGAAUACUGCAGCAUU	71	2	228	0	2	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12430970-12431389	Cluster_2679	Pocillopora_meandrina_HIv1___Sc0000006	12430970	12431389	420	241	122	0.0	-	UAAGUUACACUGAUUUAACUCCUUUACA	14	3	233	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12431613-12432339	Cluster_2680	Pocillopora_meandrina_HIv1___Sc0000006	12431613	12432339	727	470	233	0.0	-	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	37	10	446	1	5	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12432474-12432909	Cluster_2681	Pocillopora_meandrina_HIv1___Sc0000006	12432474	12432909	436	391	153	0.010230179028132993	-	UGAAUCAUCACCGUCAUCUGCAGGUAGC	57	12	363	2	2	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12435659-12438419	Cluster_2682	Pocillopora_meandrina_HIv1___Sc0000006	12435659	12438419	2761	8060	2439	0.003101736972704715	-	UUAGAUUUGUGCUUUCUUCAAGAGAACUUGG	340	281	7430	122	50	98	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12438876-12439555	Cluster_2683	Pocillopora_meandrina_HIv1___Sc0000006	12438876	12439555	680	8229	547	0.0006076072426783327	-	UGAACAACAACUGCAGCGAAUAAACA	694	357	7430	171	161	34	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12440581-12441849	Cluster_2684	Pocillopora_meandrina_HIv1___Sc0000006	12440581	12441849	1269	7821	1223	0.030175169415675746	-	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1550	82	7457	20	62	110	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12441900-12443319	Cluster_2685	Pocillopora_meandrina_HIv1___Sc0000006	12441900	12443319	1420	2399	872	0.0029178824510212586	-	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	132	15	2327	1	16	22	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12444136-12444951	Cluster_2686	Pocillopora_meandrina_HIv1___Sc0000006	12444136	12444951	816	28616	1235	0.00034945485043332404	-	UAUUUCAGGCUUCUCAAACAUCAUGUGA	4677	633	27412	111	200	118	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12446808-12450450	Cluster_2687	Pocillopora_meandrina_HIv1___Sc0000006	12446808	12450450	3643	147541	6308	0.0008065554659382816	-	UACGUUGGCUUUGUAGAUUACCCUGGUG	10685	952	137726	3748	530	3028	1557	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12450615-12452425	Cluster_2688	Pocillopora_meandrina_HIv1___Sc0000006	12450615	12452425	1811	24602	3386	0.00044711812047800993	-	UCCGAACUCUUGGCUUCUUGGCUUUGCG	1081	270	23589	119	122	146	356	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12452456-12453487	Cluster_2689	Pocillopora_meandrina_HIv1___Sc0000006	12452456	12453487	1032	1153	557	0.0	-	UGUUAUUGAUUCGUUGCCCGGACUCAUGGC	33	63	1016	9	26	15	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12453604-12457216	Cluster_2690	Pocillopora_meandrina_HIv1___Sc0000006	12453604	12457216	3613	87031	3535	0.0002757638082981926	-	UGUCCACCCCCCACCGGCUGUUUUUUGGUC	16328	1415	83249	325	1007	357	678	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12457222-12458419	Cluster_2691	Pocillopora_meandrina_HIv1___Sc0000006	12457222	12458419	1198	2797	727	0.0010725777618877368	-	UGUAAAUUUAAAACUCUGAUAUCUUGUC	234	35	2678	8	18	29	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12458759-12460546	Cluster_2692	Pocillopora_meandrina_HIv1___Sc0000006	12458759	12460546	1788	48436	2206	0.001197456437360641	-	UAAGUUGAAGAUUGUAGCAGAAGCAAAAGC	11426	442	46888	243	148	269	446	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12461223-12461652	Cluster_2693	Pocillopora_meandrina_HIv1___Sc0000006	12461223	12461652	430	202	80	0.06930693069306931	-	UUGGCGUCUGUGUCGCAUCUGUGUUGCAU	16	20	180	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12650102-12650529	Cluster_2694	Pocillopora_meandrina_HIv1___Sc0000006	12650102	12650529	428	167	49	0.9580838323353293	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	54	0	160	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12692613-12693027	Cluster_2695	Pocillopora_meandrina_HIv1___Sc0000006	12692613	12693027	415	101	6	0.0	-	CGGCUGGGGGACGGUC	48	97	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12776187-12777280	Cluster_2696	Pocillopora_meandrina_HIv1___Sc0000006	12776187	12777280	1094	1255	490	0.9752988047808765	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	92	11	1203	5	6	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12777315-12778359	Cluster_2697	Pocillopora_meandrina_HIv1___Sc0000006	12777315	12778359	1045	575	329	0.9356521739130435	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	18	15	518	11	6	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12779371-12780410	Cluster_2698	Pocillopora_meandrina_HIv1___Sc0000006	12779371	12780410	1040	871	383	0.9575200918484501	+	UAACAUCUCUCUUUCCGACUUUAACAGC	55	11	829	6	3	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12780550-12781543	Cluster_2699	Pocillopora_meandrina_HIv1___Sc0000006	12780550	12781543	994	1125	459	0.9182222222222223	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	95	11	1045	5	7	8	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12781662-12782157	Cluster_2700	Pocillopora_meandrina_HIv1___Sc0000006	12781662	12782157	496	490	272	0.7775510204081633	.	GGAAGAAUUAGAUAAUGAGAAGCU	16	5	418	5	11	11	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12792988-12793789	Cluster_2701	Pocillopora_meandrina_HIv1___Sc0000006	12792988	12793789	802	2900	714	0.06241379310344827	-	UCCGAUACAAUAACGCUGUAGCUUUU	440	80	2688	15	13	59	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12795006-12795434	Cluster_2702	Pocillopora_meandrina_HIv1___Sc0000006	12795006	12795434	429	292	179	0.030821917808219176	-	UAGAAAGGAUCCUCUUCGUCUCUUCCAGG	23	6	272	2	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12796401-12797081	Cluster_2703	Pocillopora_meandrina_HIv1___Sc0000006	12796401	12797081	681	2204	290	0.016333938294010888	-	UGUCAAAUUCAGGUUGUGUCAGGAGUCUGC	365	14	2122	2	5	39	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13037557-13038343	Cluster_2704	Pocillopora_meandrina_HIv1___Sc0000006	13037557	13038343	787	1824	476	0.9610745614035088	+	UGUAGAAUCAAUCUGUUACUAAGACACC	106	21	1724	14	9	24	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13078114-13078530	Cluster_2705	Pocillopora_meandrina_HIv1___Sc0000006	13078114	13078530	417	161	12	0.9875776397515528	+	CUUAACUGAGUGUCUAU	127	160	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13104783-13105271	Cluster_2706	Pocillopora_meandrina_HIv1___Sc0000006	13104783	13105271	489	785	308	0.7923566878980892	.	UGCGUGUAAAAGCUGGUCUCAAGAACC	152	13	710	11	6	23	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13229818-13230240	Cluster_2707	Pocillopora_meandrina_HIv1___Sc0000006	13229818	13230240	423	261	58	0.23371647509578544	.	UGUGUUUGUGUAGAGUUUUGUGU	73	97	2	27	11	121	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13238439-13238852	Cluster_2708	Pocillopora_meandrina_HIv1___Sc0000006	13238439	13238852	414	189	111	0.7513227513227513	.	UUCCGCCAUGACUGUUAUUGU	12	95	33	38	6	15	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13376534-13376951	Cluster_2709	Pocillopora_meandrina_HIv1___Sc0000006	13376534	13376951	418	384	38	0.9947916666666666	+	ACUGCUGCCGGUCGUUGU	79	383	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13443607-13444157	Cluster_2710	Pocillopora_meandrina_HIv1___Sc0000006	13443607	13444157	551	208	73	0.9423076923076923	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	33	6	185	1	2	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13445396-13446616	Cluster_2711	Pocillopora_meandrina_HIv1___Sc0000006	13445396	13446616	1221	2021	468	0.7921820880752103	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	513	16	1923	7	8	19	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13489777-13490194	Cluster_2712	Pocillopora_meandrina_HIv1___Sc0000006	13489777	13490194	418	161	19	0.0	-	GUAGUCGUGGCCGAGUGC	59	160	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13726353-13726769	Cluster_2713	Pocillopora_meandrina_HIv1___Sc0000006	13726353	13726769	417	122	9	0.00819672131147541	-	AACUUUUGACGGUGGAC	79	122	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13851754-13852280	Cluster_2714	Pocillopora_meandrina_HIv1___Sc0000006	13851754	13852280	527	7991	1271	0.0007508447002878238	-	UCGUGCAAUUUUUGGAACCCUUA	634	973	3018	753	1473	1215	559	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13862230-13862724	Cluster_2715	Pocillopora_meandrina_HIv1___Sc0000006	13862230	13862724	495	314	162	0.9840764331210191	+	UGUCCACCCCCCACU	17	39	269	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13863717-13864824	Cluster_2716	Pocillopora_meandrina_HIv1___Sc0000006	13863717	13864824	1108	35210	928	0.9976711161601818	+	UAAGAAAUCUUCCACUGAUCGUUGAGUU	7060	80	34131	77	79	194	649	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13865078-13865506	Cluster_2717	Pocillopora_meandrina_HIv1___Sc0000006	13865078	13865506	429	251	97	0.9920318725099602	+	UGAGGAUGAUGACAUAGCAUAUUGAAGUU	25	10	235	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13867251-13870516	Cluster_2718	Pocillopora_meandrina_HIv1___Sc0000006	13867251	13870516	3266	79781	4596	0.9997618480590617	+	UGCACCAGUUUGACCGUGAUUGCUCGUUGG	5762	3202	74138	407	1017	485	532	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13870573-13871700	Cluster_2719	Pocillopora_meandrina_HIv1___Sc0000006	13870573	13871700	1128	2935	679	0.9979557069846678	+	UUAUCAUAUGUCUCUGUAGUUUUUACAAC	336	53	2844	10	9	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13871763-13874376	Cluster_2720	Pocillopora_meandrina_HIv1___Sc0000006	13871763	13874376	2614	44187	4838	0.9892276008780864	+	UGCGCCAGUCUUGUUGUGAUUGUCUUUUGGA	3262	995	40667	265	502	852	906	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13874405-13875000	Cluster_2721	Pocillopora_meandrina_HIv1___Sc0000006	13874405	13875000	596	385	57	0.9974025974025974	+	UGAUUUUUGGAUGCAUAAGAAAUGUACA	199	3	377	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13879584-13881610	Cluster_2722	Pocillopora_meandrina_HIv1___Sc0000006	13879584	13881610	2027	9502	2639	0.8147758366659651	+	UUCUUUCGAUUUUCUUGCAUUUUCUGA	161	171	8175	59	140	377	580	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:14024001-14024428	Cluster_2723	Pocillopora_meandrina_HIv1___Sc0000006	14024001	14024428	428	236	49	0.9915254237288136	+	UGGUUGGACAGUGUUCCAGAAGAGACUG	41	14	206	0	15	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:50715-51144	Cluster_2724	Pocillopora_meandrina_HIv1___Sc0000007	50715	51144	430	398	34	0.9974874371859297	+	AACUACUGCUCGUACUCUAGAUAUGAC	111	3	394	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:288061-288475	Cluster_2725	Pocillopora_meandrina_HIv1___Sc0000007	288061	288475	415	143	12	0.02097902097902098	-	GUGGAAGGUAGGUCC	123	141	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:298237-298638	Cluster_2726	Pocillopora_meandrina_HIv1___Sc0000007	298237	298638	402	117	51	0.4188034188034188	.	UUUUCCGAGGUCGCG	53	86	22	1	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:611860-612286	Cluster_2727	Pocillopora_meandrina_HIv1___Sc0000007	611860	612286	427	284	77	0.6830985915492958	.	GCUUGAUGUACGCGAAAGAAAUUCGA	54	13	260	2	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:616352-617371	Cluster_2728	Pocillopora_meandrina_HIv1___Sc0000007	616352	617371	1020	2153	498	0.9447282861124013	+	UGAGAAUGUUUAGCCCGAGAUACGCUGA	250	56	1959	51	11	32	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:630887-631300	Cluster_2729	Pocillopora_meandrina_HIv1___Sc0000007	630887	631300	414	78	21	0.9871794871794872	+	CAAAAGGUGUUGGUU	17	78	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:872994-873470	Cluster_2730	Pocillopora_meandrina_HIv1___Sc0000007	872994	873470	477	49459	776	2.0218767059584705e-05	-	GGGGAUGUAGCUCAGUGGU	14212	32252	12103	1259	612	743	2490	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:893771-894189	Cluster_2731	Pocillopora_meandrina_HIv1___Sc0000007	893771	894189	419	654	49	0.9984709480122325	+	AUCGGCCGUGGAUUGGCU	278	649	2	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:896500-896915	Cluster_2732	Pocillopora_meandrina_HIv1___Sc0000007	896500	896915	416	141	28	0.9858156028368794	+	AAGUGUGCUCUUAACC	78	126	11	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:969533-970229	Cluster_2733	Pocillopora_meandrina_HIv1___Sc0000007	969533	970229	697	265	141	0.9245283018867925	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	15	5	251	1	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:971464-971892	Cluster_2734	Pocillopora_meandrina_HIv1___Sc0000007	971464	971892	429	276	155	0.8731884057971014	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	26	4	254	0	1	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1122671-1123098	Cluster_2735	Pocillopora_meandrina_HIv1___Sc0000007	1122671	1123098	428	199	51	0.949748743718593	+	UAUUAUUCAUCUGCUGUCUUUUUGCCUC	63	10	177	6	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1138171-1138586	Cluster_2736	Pocillopora_meandrina_HIv1___Sc0000007	1138171	1138586	416	93	15	0.9032258064516129	+	CGGCCUGAAAAAAAAAA	68	88	3	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1154912-1155450	Cluster_2737	Pocillopora_meandrina_HIv1___Sc0000007	1154912	1155450	539	2475	598	0.0008080808080808081	-	CCAAUUACUGAUAACUCAGACACUC	182	418	1396	175	126	124	236	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1291292-1291706	Cluster_2738	Pocillopora_meandrina_HIv1___Sc0000007	1291292	1291706	415	95	18	0.06315789473684211	-	UCGGGCUGAGACUGG	36	94	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1441905-1442319	Cluster_2739	Pocillopora_meandrina_HIv1___Sc0000007	1441905	1442319	415	106	13	1.0	+	UUAAAGGCGUAGAAGC	38	106	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1526279-1526967	Cluster_2740	Pocillopora_meandrina_HIv1___Sc0000007	1526279	1526967	689	238	87	0.9873949579831933	+	UCCGUGUGUUUGUUUGGAUCAUAUCUACGC	28	6	216	3	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1823708-1824268	Cluster_2741	Pocillopora_meandrina_HIv1___Sc0000007	1823708	1824268	561	4146	488	0.9587554269175108	+	UAGAGCUCUUGUUUUUUCCACAUCAAUA	1162	162	3719	17	121	50	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1884502-1884928	Cluster_2742	Pocillopora_meandrina_HIv1___Sc0000007	1884502	1884928	427	372	169	0.9704301075268817	+	UAGGUAAUGGCACAAACUGAGAGGCGU	30	1	357	2	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1885527-1886118	Cluster_2743	Pocillopora_meandrina_HIv1___Sc0000007	1885527	1886118	592	547	315	0.9305301645338209	+	UGCAAGAAGUACUGGGUUCACUGAGACC	22	7	513	2	1	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1886403-1887596	Cluster_2744	Pocillopora_meandrina_HIv1___Sc0000007	1886403	1887596	1194	1200	523	0.9208333333333333	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	105	13	1110	3	8	24	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1925272-1925700	Cluster_2745	Pocillopora_meandrina_HIv1___Sc0000007	1925272	1925700	429	122	39	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	25	3	112	0	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1953727-1954156	Cluster_2746	Pocillopora_meandrina_HIv1___Sc0000007	1953727	1954156	430	218	51	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	57	2	212	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2004533-2004961	Cluster_2747	Pocillopora_meandrina_HIv1___Sc0000007	2004533	2004961	429	109	38	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	34	4	105	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2025511-2025939	Cluster_2748	Pocillopora_meandrina_HIv1___Sc0000007	2025511	2025939	429	119	35	0.008403361344537815	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	36	3	111	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2186450-2186873	Cluster_2749	Pocillopora_meandrina_HIv1___Sc0000007	2186450	2186873	424	93	26	0.03225806451612903	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	26	2	89	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2187088-2187504	Cluster_2750	Pocillopora_meandrina_HIv1___Sc0000007	2187088	2187504	417	254	8	0.007874015748031496	-	CCGGCUGUCGCACCG	99	254	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2304432-2304859	Cluster_2751	Pocillopora_meandrina_HIv1___Sc0000007	2304432	2304859	428	181	39	0.2265193370165746	.	UUGUUGUGUUUUUCGAUGGUGGGCAUCC	57	4	159	7	6	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2321105-2321518	Cluster_2752	Pocillopora_meandrina_HIv1___Sc0000007	2321105	2321518	414	160	89	0.125	-	UGUGACCGAGGUCUUGAAAAA	20	73	2	49	24	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2364816-2365242	Cluster_2753	Pocillopora_meandrina_HIv1___Sc0000007	2364816	2365242	427	187	70	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	29	1	182	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2399478-2400302	Cluster_2754	Pocillopora_meandrina_HIv1___Sc0000007	2399478	2400302	825	812	174	0.9938423645320197	+	AGCUGAGUGAUACUGACAUUUC	198	149	33	157	359	94	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2483714-2484130	Cluster_2755	Pocillopora_meandrina_HIv1___Sc0000007	2483714	2484130	417	599	29	0.00333889816360601	-	GAGUUCUACAGUCCGA	359	599	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2625697-2626145	Cluster_2756	Pocillopora_meandrina_HIv1___Sc0000007	2625697	2626145	449	482	208	0.18049792531120332	-	UAUGACGUUCCAGAAUCUUUGACAAAA	39	4	457	3	4	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2626668-2627096	Cluster_2757	Pocillopora_meandrina_HIv1___Sc0000007	2626668	2627096	429	134	46	0.014925373134328358	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	25	3	130	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2716658-2718359	Cluster_2758	Pocillopora_meandrina_HIv1___Sc0000007	2716658	2718359	1702	3432	1121	0.09294871794871795	-	UGUUUCGUCUAUGUGCAAUGUUACUU	136	34	3214	13	24	52	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2718800-2719226	Cluster_2759	Pocillopora_meandrina_HIv1___Sc0000007	2718800	2719226	427	131	62	0.12213740458015267	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	47	3	118	0	6	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2719310-2719789	Cluster_2760	Pocillopora_meandrina_HIv1___Sc0000007	2719310	2719789	480	346	136	0.08670520231213873	-	UCCAAUCACACACAGUUCUCCUGCGGC	63	1	328	3	0	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2720111-2720538	Cluster_2761	Pocillopora_meandrina_HIv1___Sc0000007	2720111	2720538	428	253	136	0.04743083003952569	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	31	0	244	1	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2950257-2950671	Cluster_2762	Pocillopora_meandrina_HIv1___Sc0000007	2950257	2950671	415	206	24	0.9951456310679612	+	AGCUGACUUUGGUGG	98	206	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3019487-3019911	Cluster_2763	Pocillopora_meandrina_HIv1___Sc0000007	3019487	3019911	425	292	183	0.1917808219178082	-	UGAGAAAUGAUCGUUUGAUGGUGUCUGUG	8	4	269	2	2	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3066364-3066790	Cluster_2764	Pocillopora_meandrina_HIv1___Sc0000007	3066364	3066790	427	215	97	0.0	-	CCUCAUGGACGCCAAACUGAUGCUCAC	21	2	208	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3070005-3070433	Cluster_2765	Pocillopora_meandrina_HIv1___Sc0000007	3070005	3070433	429	101	22	0.0297029702970297	-	UGAGUUCUACUGUAACGACUGAAUAGACU	37	2	93	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3107655-3108083	Cluster_2766	Pocillopora_meandrina_HIv1___Sc0000007	3107655	3108083	429	307	55	0.026058631921824105	-	AAGAUGUCGAGCGUUUUCGGAACGAGUCG	125	13	274	0	2	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3209174-3209695	Cluster_2767	Pocillopora_meandrina_HIv1___Sc0000007	3209174	3209695	522	409	230	0.004889975550122249	-	GUGUCAGCUGCCUGCACUGGGCCAGG	37	68	245	14	22	29	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3243241-3243668	Cluster_2768	Pocillopora_meandrina_HIv1___Sc0000007	3243241	3243668	428	151	65	0.9205298013245033	+	UGUAUUUGCUGAUCUAUUUGACAUCCUU	18	8	140	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3244846-3247533	Cluster_2769	Pocillopora_meandrina_HIv1___Sc0000007	3244846	3247533	2688	4681	3107	0.002563554795983764	-	GGGAAACAGUGUAUACUUUGUAAGU	18	1427	1963	285	335	343	328	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3247717-3248682	Cluster_2770	Pocillopora_meandrina_HIv1___Sc0000007	3247717	3248682	966	1379	951	0.0029006526468455403	-	UUUGGUCUGUGAGCAAAAGCA	12	402	565	106	118	109	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3248740-3249651	Cluster_2771	Pocillopora_meandrina_HIv1___Sc0000007	3248740	3249651	912	1007	700	0.0019860973187686196	-	GCUGUGUCUUAGAGAACC	17	330	369	79	84	71	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3249791-3251091	Cluster_2772	Pocillopora_meandrina_HIv1___Sc0000007	3249791	3251091	1301	1575	1137	0.0025396825396825397	-	CAAAAGACUGUAUUGUACUCAAUU	6	545	564	122	108	125	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3251174-3254056	Cluster_2773	Pocillopora_meandrina_HIv1___Sc0000007	3251174	3254056	2883	3850	2676	0.004675324675324675	-	GAUGGACCGAGCAGCA	10	1312	1409	267	300	293	269	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3254203-3255318	Cluster_2774	Pocillopora_meandrina_HIv1___Sc0000007	3254203	3255318	1116	1404	960	0.004273504273504274	-	UUUGAACUAGUGGAGUGGAAAGCU	18	480	514	127	92	95	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3256040-3256965	Cluster_2775	Pocillopora_meandrina_HIv1___Sc0000007	3256040	3256965	926	1099	775	0.0018198362147406734	-	AACACUCCGUGUACUCAGACA	10	375	395	84	78	87	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3284710-3285240	Cluster_2776	Pocillopora_meandrina_HIv1___Sc0000007	3284710	3285240	531	973	303	1.0	+	UACCCUCUUCAUUAAAUAGCUUGC	60	99	494	60	51	156	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3285428-3285960	Cluster_2777	Pocillopora_meandrina_HIv1___Sc0000007	3285428	3285960	533	419	126	0.9928400954653938	+	UACCCUCUUCAUUUAAUAGCUUGCUU	77	145	178	40	22	18	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3286476-3286958	Cluster_2778	Pocillopora_meandrina_HIv1___Sc0000007	3286476	3286958	483	6037	568	0.9996687096239855	+	CCAUUGAGUGCUGUCUGAGCUGA	670	876	1077	403	1396	1697	588	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3412445-3412875	Cluster_2779	Pocillopora_meandrina_HIv1___Sc0000007	3412445	3412875	431	1456	110	1.0	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	474	0	1451	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3416396-3416823	Cluster_2780	Pocillopora_meandrina_HIv1___Sc0000007	3416396	3416823	428	86	14	0.023255813953488372	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	32	0	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3596624-3597052	Cluster_2781	Pocillopora_meandrina_HIv1___Sc0000007	3596624	3597052	429	150	42	0.8133333333333334	+	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	46	3	144	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3621414-3621871	Cluster_2782	Pocillopora_meandrina_HIv1___Sc0000007	3621414	3621871	458	604	179	0.8692052980132451	+	UUGGACGAAAUUUCGAGGUUCACACUCGUU	72	10	576	4	2	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3625165-3625966	Cluster_2783	Pocillopora_meandrina_HIv1___Sc0000007	3625165	3625966	802	523	165	0.8948374760994264	+	UGAGACUUUGAUUUUAACUGCU	48	39	358	10	94	13	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3629143-3629887	Cluster_2784	Pocillopora_meandrina_HIv1___Sc0000007	3629143	3629887	745	1320	445	0.6265151515151515	.	CAAGACUGAAUUCCUUAUCAUUGGCACAUC	169	18	1231	9	5	16	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3631086-3631919	Cluster_2785	Pocillopora_meandrina_HIv1___Sc0000007	3631086	3631919	834	587	236	0.05110732538330494	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	39	4	569	1	3	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3633717-3634331	Cluster_2786	Pocillopora_meandrina_HIv1___Sc0000007	3633717	3634331	615	1379	172	0.23205221174764323	.	UGCUGUAUGUAAUCUGAUGCAAGAACGC	171	11	1202	107	9	33	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3634376-3635130	Cluster_2787	Pocillopora_meandrina_HIv1___Sc0000007	3634376	3635130	755	834	151	0.5515587529976019	.	UAAAGAGGACUGAUAAUCUCAGGUUAUC	253	7	638	5	25	28	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3635508-3635937	Cluster_2788	Pocillopora_meandrina_HIv1___Sc0000007	3635508	3635937	430	391	48	0.017902813299232736	-	AAGGAGUUGAAAAGAACAAUGAUGUAGC	96	2	388	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3656762-3657191	Cluster_2789	Pocillopora_meandrina_HIv1___Sc0000007	3656762	3657191	430	244	46	0.045081967213114756	-	AACUGAAGAAUUAAUCUCUAAAAUUGGUAG	96	5	238	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3662339-3662765	Cluster_2790	Pocillopora_meandrina_HIv1___Sc0000007	3662339	3662765	427	172	70	0.9941860465116279	+	UUUGAUUGACGUACGGUAUUUGAGACGC	18	6	161	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3690491-3691008	Cluster_2791	Pocillopora_meandrina_HIv1___Sc0000007	3690491	3691008	518	486	221	0.00205761316872428	-	UGGGUAUUUCCUCGUCCGCAGAACUGGUU	42	6	471	3	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3871980-3872681	Cluster_2792	Pocillopora_meandrina_HIv1___Sc0000007	3871980	3872681	702	256	140	0.9296875	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	23	3	243	1	1	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3873911-3874339	Cluster_2793	Pocillopora_meandrina_HIv1___Sc0000007	3873911	3874339	429	259	138	0.8416988416988417	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	17	1	238	0	3	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4514094-4514523	Cluster_2794	Pocillopora_meandrina_HIv1___Sc0000007	4514094	4514523	430	188	33	0.9893617021276596	+	UCAACAGCCUGAACUUGUCUUCACAAGACU	58	2	186	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4561649-4562122	Cluster_2795	Pocillopora_meandrina_HIv1___Sc0000007	4561649	4562122	474	1581	504	0.9917773561037319	+	CAGAGGAAGCGUGCU	126	1142	219	80	78	40	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4596422-4596884	Cluster_2796	Pocillopora_meandrina_HIv1___Sc0000007	4596422	4596884	463	1563	389	0.999360204734485	+	AAUAAUGAUGAAUUGCACUGGGUUAUGAUA	118	360	764	64	74	156	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4624808-4625430	Cluster_2797	Pocillopora_meandrina_HIv1___Sc0000007	4624808	4625430	623	872	222	0.963302752293578	+	UAAGCAAUCAACUCCAACAAACUCGUCAGA	257	9	839	7	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4800325-4800781	Cluster_2798	Pocillopora_meandrina_HIv1___Sc0000007	4800325	4800781	457	640	197	0.0	-	AAUAAUGAUGAUUUGCACUGGGU	28	135	187	70	62	106	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4801557-4801981	Cluster_2799	Pocillopora_meandrina_HIv1___Sc0000007	4801557	4801981	425	215	102	0.0	-	AAUGAUGAUGAUUUGCACUGGGU	12	46	90	9	13	33	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4846335-4846743	Cluster_2800	Pocillopora_meandrina_HIv1___Sc0000007	4846335	4846743	409	136	68	0.34558823529411764	.	GAUGAAAGGAAAUGCAAACUUGCUAAAACA	21	4	121	3	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4889037-4889456	Cluster_2801	Pocillopora_meandrina_HIv1___Sc0000007	4889037	4889456	420	118	40	1.0	+	GAUUAUUUGUAGAACUUGCAGUGU	21	55	29	5	2	1	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4940258-4940673	Cluster_2802	Pocillopora_meandrina_HIv1___Sc0000007	4940258	4940673	416	218	63	0.05504587155963303	-	UGUAUCCCAACCAAGU	137	142	61	2	3	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4960512-4960935	Cluster_2803	Pocillopora_meandrina_HIv1___Sc0000007	4960512	4960935	424	139	48	0.9568345323741008	+	UUGGGGAUCAAAGACGAAACGAGU	43	2	35	9	0	15	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5045346-5045792	Cluster_2804	Pocillopora_meandrina_HIv1___Sc0000007	5045346	5045792	447	588	429	0.0	-	AAUUGAUUUUCGUGAAGCUGUCGUU	7	184	238	44	38	36	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5047265-5047679	Cluster_2805	Pocillopora_meandrina_HIv1___Sc0000007	5047265	5047679	415	261	105	0.007662835249042145	-	AGACUUGAAGCGGUA	87	167	49	11	14	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5048040-5048457	Cluster_2806	Pocillopora_meandrina_HIv1___Sc0000007	5048040	5048457	418	308	231	0.012987012987012988	-	GGAUGAAUCUGACAGCGACU	7	102	122	27	23	19	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5147627-5148534	Cluster_2807	Pocillopora_meandrina_HIv1___Sc0000007	5147627	5148534	908	4375	408	0.9641142857142857	+	UAAGAUCUCUUCGGUCAGAUCGUCACGG	1642	31	4308	6	3	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5192655-5193083	Cluster_2808	Pocillopora_meandrina_HIv1___Sc0000007	5192655	5193083	429	130	54	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	37	0	125	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5193672-5194081	Cluster_2809	Pocillopora_meandrina_HIv1___Sc0000007	5193672	5194081	410	79	42	0.27848101265822783	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	11	0	74	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5194635-5195063	Cluster_2810	Pocillopora_meandrina_HIv1___Sc0000007	5194635	5195063	429	131	47	0.0	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	49	0	119	2	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5223879-5224288	Cluster_2811	Pocillopora_meandrina_HIv1___Sc0000007	5223879	5224288	410	96	24	0.3333333333333333	.	AGUGUCAGAAUGCAAUGCCUACUUAUCCCC	22	2	84	5	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5228968-5229397	Cluster_2812	Pocillopora_meandrina_HIv1___Sc0000007	5228968	5229397	430	408	104	0.01715686274509804	-	UGUUCAUGCUGUGCUUGACGAGCUUGUC	109	6	393	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5229741-5230360	Cluster_2813	Pocillopora_meandrina_HIv1___Sc0000007	5229741	5230360	620	395	162	0.060759493670886074	-	UCAAAUACAACACCAAAAGAC	37	18	315	42	4	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5262945-5263345	Cluster_2814	Pocillopora_meandrina_HIv1___Sc0000007	5262945	5263345	401	122	78	0.1885245901639344	-	UAUACGAACAGAUCAGUUCCUCCGA	6	3	106	6	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5268009-5268424	Cluster_2815	Pocillopora_meandrina_HIv1___Sc0000007	5268009	5268424	416	146	15	0.03424657534246575	-	AGGGUUAAGUUGCGGG	68	144	0	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5303056-5304110	Cluster_2816	Pocillopora_meandrina_HIv1___Sc0000007	5303056	5304110	1055	474	186	0.959915611814346	+	UGUUUACGGACGGUCCUUAUGUUGUGGAG	33	5	450	1	5	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5306438-5306997	Cluster_2817	Pocillopora_meandrina_HIv1___Sc0000007	5306438	5306997	560	1008	260	0.9702380952380952	+	UGGACGUACGCAUUCACGAUCUCGCUCGUU	78	2	969	8	1	7	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5310720-5311147	Cluster_2818	Pocillopora_meandrina_HIv1___Sc0000007	5310720	5311147	428	240	106	0.31666666666666665	.	UGGACCGUACGAAUCUCACUGAUCGACA	35	51	150	25	6	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5326494-5327037	Cluster_2819	Pocillopora_meandrina_HIv1___Sc0000007	5326494	5327037	544	1179	335	0.998303647158609	+	UGUAGAUUACAUUGUCGGCACAUU	193	112	423	83	81	151	329	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5327132-5327635	Cluster_2820	Pocillopora_meandrina_HIv1___Sc0000007	5327132	5327635	504	485	256	0.9938144329896907	+	UGCAGGACAAGAGAAAAGAAUU	26	93	213	41	53	32	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5333248-5333666	Cluster_2821	Pocillopora_meandrina_HIv1___Sc0000007	5333248	5333666	419	291	201	0.037800687285223365	-	GUAAGCUUUGUCAGCACUCUACAGAUUUGU	11	91	108	22	16	33	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5337433-5337848	Cluster_2822	Pocillopora_meandrina_HIv1___Sc0000007	5337433	5337848	416	391	43	0.9309462915601023	+	GCUUGGGACGCUGGCA	194	371	14	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5341789-5342202	Cluster_2823	Pocillopora_meandrina_HIv1___Sc0000007	5341789	5342202	414	158	81	0.0	-	GCAGAUGAUAAAUGCUCCUUGACUGUGGCA	33	43	96	6	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5497876-5498312	Cluster_2824	Pocillopora_meandrina_HIv1___Sc0000007	5497876	5498312	437	347	245	0.0	-	CUCUUCUACGCUGGACAACCUCUAGA	10	145	112	38	20	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5579669-5580098	Cluster_2825	Pocillopora_meandrina_HIv1___Sc0000007	5579669	5580098	430	376	44	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACC	205	4	353	0	2	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5636610-5637039	Cluster_2826	Pocillopora_meandrina_HIv1___Sc0000007	5636610	5637039	430	364	42	0.0027472527472527475	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACC	192	0	343	1	5	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5688875-5689904	Cluster_2827	Pocillopora_meandrina_HIv1___Sc0000007	5688875	5689904	1030	18291	1763	0.0	-	GUGGCAACUUUGCUAGUGAACU	1466	1270	7840	508	4567	1738	2368	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5886330-5886758	Cluster_2828	Pocillopora_meandrina_HIv1___Sc0000007	5886330	5886758	429	133	26	0.022556390977443608	-	AUCUAAACGAACUUGUUUUUCUUAUGAGCA	57	1	125	0	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5914402-5914822	Cluster_2829	Pocillopora_meandrina_HIv1___Sc0000007	5914402	5914822	421	103	41	0.7475728155339806	.	UGUGUAUGCGUCUAUAAGUAUUUUGAGC	26	2	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5999694-6000109	Cluster_2830	Pocillopora_meandrina_HIv1___Sc0000007	5999694	6000109	416	122	25	0.9262295081967213	+	AACUUUUGACCUCAUU	49	119	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6293412-6293826	Cluster_2831	Pocillopora_meandrina_HIv1___Sc0000007	6293412	6293826	415	294	8	0.9931972789115646	+	CUUCCCGAGGUCGCG	262	293	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6376617-6377151	Cluster_2832	Pocillopora_meandrina_HIv1___Sc0000007	6376617	6377151	535	710	171	0.9985915492957746	+	UGGCAUUUGUAAAGCCCACGCGACGU	100	44	594	22	13	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6394918-6395341	Cluster_2833	Pocillopora_meandrina_HIv1___Sc0000007	6394918	6395341	424	121	37	0.024793388429752067	-	GGGGGCAUAGCUCAGUGGUAGAGCA	19	13	70	6	11	2	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6616417-6616844	Cluster_2834	Pocillopora_meandrina_HIv1___Sc0000007	6616417	6616844	428	279	79	0.05734767025089606	-	UGAUAAACCUGUAGCUGAAGCUUCUGC	75	9	245	5	7	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6749085-6749513	Cluster_2835	Pocillopora_meandrina_HIv1___Sc0000007	6749085	6749513	429	232	48	0.01293103448275862	-	AACUGAAGAAUCGAUCUCUGAAACCGAUA	56	5	209	1	4	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6929571-6929998	Cluster_2836	Pocillopora_meandrina_HIv1___Sc0000007	6929571	6929998	428	276	65	0.14492753623188406	-	UGAAACUCUGAUCUGAAAACAUUUGUCA	66	15	249	6	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6983631-6984060	Cluster_2837	Pocillopora_meandrina_HIv1___Sc0000007	6983631	6984060	430	85	25	0.023529411764705882	-	UGUUUACUUUCUUUACAACUUCGGAUACGGG	22	0	83	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6986003-6986422	Cluster_2838	Pocillopora_meandrina_HIv1___Sc0000007	6986003	6986422	420	92	30	0.021739130434782608	-	AACUGAAGAAUCAACCUCUGAAACCGAUA	48	2	83	4	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7044681-7045103	Cluster_2839	Pocillopora_meandrina_HIv1___Sc0000007	7044681	7045103	423	206	75	0.014563106796116505	-	UGCAGAGACUCUUGGGAACCAAAGCUCAUU	43	4	195	4	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7045916-7046838	Cluster_2840	Pocillopora_meandrina_HIv1___Sc0000007	7045916	7046838	923	1910	512	0.0005235602094240838	-	UCGGCCACGAUCUUUCUUGUAAACUAGAAA	213	24	1844	7	4	15	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7046891-7047410	Cluster_2841	Pocillopora_meandrina_HIv1___Sc0000007	7046891	7047410	520	564	165	0.0	-	UGAUAUCAAUAUGACGUCAUAACCGUGGGA	121	4	536	3	3	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7082683-7083500	Cluster_2842	Pocillopora_meandrina_HIv1___Sc0000007	7082683	7083500	818	659	191	0.3975720789074355	.	UGGACCACAAACUCUGACCCUAAGCUUAUU	95	8	559	10	17	9	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7083968-7084500	Cluster_2843	Pocillopora_meandrina_HIv1___Sc0000007	7083968	7084500	533	2098	246	0.9666348903717826	+	UUUGAUUCCGAAAAAAUGUAAUCUUCUGC	1162	24	2017	1	12	22	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7153266-7154927	Cluster_2844	Pocillopora_meandrina_HIv1___Sc0000007	7153266	7154927	1662	8939	2304	0.9301935339523436	+	UGAUAGACUGCACGACGAUUUACGUCA	521	106	8151	61	71	261	289	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7154981-7155657	Cluster_2845	Pocillopora_meandrina_HIv1___Sc0000007	7154981	7155657	677	7989	570	0.9962448366503943	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2172	15	7835	4	52	35	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7248731-7249149	Cluster_2846	Pocillopora_meandrina_HIv1___Sc0000007	7248731	7249149	419	137	43	0.058394160583941604	-	UUGACAGAUUGAGAGCC	30	45	57	1	14	13	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7334354-7334768	Cluster_2847	Pocillopora_meandrina_HIv1___Sc0000007	7334354	7334768	415	193	18	0.9533678756476683	+	GAGACUUGAAGCGGA	105	190	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7355065-7355542	Cluster_2848	Pocillopora_meandrina_HIv1___Sc0000007	7355065	7355542	478	2432	434	0.9991776315789473	+	GCCCCAAUGAUUAUUUGUAUUGUAGAGU	245	428	1225	138	258	173	210	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7479295-7479710	Cluster_2849	Pocillopora_meandrina_HIv1___Sc0000007	7479295	7479710	416	643	8	1.0	+	CCGUGUUGUAGGCGG	343	643	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7480715-7481625	Cluster_2850	Pocillopora_meandrina_HIv1___Sc0000007	7480715	7481625	911	866	314	0.8914549653579676	+	UGGGUCGUAUUCCUAAAUCUUGAGCAA	63	26	767	15	7	16	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7538983-7539398	Cluster_2851	Pocillopora_meandrina_HIv1___Sc0000007	7538983	7539398	416	83	22	0.0	-	CCGGGUCUCGGCACCA	34	71	3	1	8	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7611857-7612280	Cluster_2852	Pocillopora_meandrina_HIv1___Sc0000007	7611857	7612280	424	75	23	0.9733333333333334	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCGG	15	0	74	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7614948-7615363	Cluster_2853	Pocillopora_meandrina_HIv1___Sc0000007	7614948	7615363	416	218	135	0.8440366972477065	+	UACUGAUAGUGAAACUGCUCCUUGAACC	15	9	201	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7615385-7615815	Cluster_2854	Pocillopora_meandrina_HIv1___Sc0000007	7615385	7615815	431	300	144	0.9366666666666666	+	UGAUAACUGUACUCUUGAAAUUCAUCG	18	6	279	0	0	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7637557-7638159	Cluster_2855	Pocillopora_meandrina_HIv1___Sc0000007	7637557	7638159	603	771	448	0.0038910505836575876	-	AUUGCUAAUGGAUUUGCUGAGAAGU	21	281	310	51	50	36	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7639145-7639561	Cluster_2856	Pocillopora_meandrina_HIv1___Sc0000007	7639145	7639561	417	248	179	0.0	-	GCAGAAGGAACCAUUGGCU	7	142	58	13	10	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7640264-7640677	Cluster_2857	Pocillopora_meandrina_HIv1___Sc0000007	7640264	7640677	414	95	62	0.010526315789473684	-	CGUGUGGAACGGACGU	5	56	15	7	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7641666-7642131	Cluster_2858	Pocillopora_meandrina_HIv1___Sc0000007	7641666	7642131	466	390	264	0.007692307692307693	-	CUGAUCGUUUUUUUA	8	163	131	11	39	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7650244-7650717	Cluster_2859	Pocillopora_meandrina_HIv1___Sc0000007	7650244	7650717	474	62728	2237	0.9987246524677975	+	CACCCCUCUCCGCUCAUCGACCUCAUC	4553	8975	47237	1611	1557	1540	1808	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7651332-7651803	Cluster_2860	Pocillopora_meandrina_HIv1___Sc0000007	7651332	7651803	472	45192	1407	0.993162506638343	+	CACCCCUCUCCGCCUAUCGACCUCAU	3912	11355	28247	1685	1027	1343	1535	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7651964-7652545	Cluster_2861	Pocillopora_meandrina_HIv1___Sc0000007	7651964	7652545	582	1029	256	0.6219630709426628	.	UUUUGACUACCAAUGGAACCAGAAAGU	136	168	684	58	43	9	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7670315-7670765	Cluster_2862	Pocillopora_meandrina_HIv1___Sc0000007	7670315	7670765	451	3049	131	1.0	+	UCAUGUAGAUGCGCAUGUCCGG	790	1158	96	74	1610	102	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7794360-7794782	Cluster_2863	Pocillopora_meandrina_HIv1___Sc0000007	7794360	7794782	423	328	241	0.9878048780487805	+	AUCUUCGAUCACAGGGACUGU	7	131	101	42	14	15	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7796875-7797277	Cluster_2864	Pocillopora_meandrina_HIv1___Sc0000007	7796875	7797277	403	214	155	0.9906542056074766	+	AAUGGAAGCUGUGGU	6	99	53	17	16	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8002703-8003120	Cluster_2865	Pocillopora_meandrina_HIv1___Sc0000007	8002703	8003120	418	878	62	1.0	+	ACCUCGCUCUGCUACCA	227	878	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8052923-8053350	Cluster_2866	Pocillopora_meandrina_HIv1___Sc0000007	8052923	8053350	428	149	48	0.9932885906040269	+	UGGAAUUCGAAGCAAGUAACAAUGGACA	31	3	138	4	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8178845-8179260	Cluster_2867	Pocillopora_meandrina_HIv1___Sc0000007	8178845	8179260	416	150	8	0.006666666666666667	-	GGGCGGGUGGCGAAAU	81	150	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8205880-8206297	Cluster_2868	Pocillopora_meandrina_HIv1___Sc0000007	8205880	8206297	418	115	63	0.8173913043478261	+	UCUCGGCAUCUAAUCUCCAUU	25	46	0	60	4	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8242890-8243324	Cluster_2869	Pocillopora_meandrina_HIv1___Sc0000007	8242890	8243324	435	417	85	0.0671462829736211	-	UGUGUUGUUUCUCACCUUUGCCGUCAA	104	35	364	2	3	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8285014-8285444	Cluster_2870	Pocillopora_meandrina_HIv1___Sc0000007	8285014	8285444	431	28412	250	0.001654230606785865	-	UAACUUCAACUAGAUCGAAAUGCUCGUGA	20575	39	28249	4	5	4	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8508719-8509201	Cluster_2871	Pocillopora_meandrina_HIv1___Sc0000007	8508719	8509201	483	2408	325	0.0004152823920265781	-	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	701	131	2097	83	67	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8601575-8601990	Cluster_2872	Pocillopora_meandrina_HIv1___Sc0000007	8601575	8601990	416	286	14	0.9825174825174825	+	UACCUGGUUGAUCCG	92	286	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8700410-8700826	Cluster_2873	Pocillopora_meandrina_HIv1___Sc0000007	8700410	8700826	417	588	15	0.0	-	UUAGGGUGCUGUCGGCC	419	585	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8848491-8848918	Cluster_2874	Pocillopora_meandrina_HIv1___Sc0000007	8848491	8848918	428	198	90	0.9646464646464646	+	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	32	4	190	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8849560-8849989	Cluster_2875	Pocillopora_meandrina_HIv1___Sc0000007	8849560	8849989	430	425	116	0.971764705882353	+	UAUCGUCUUGUUUCUGUUCUGACCCGAAC	78	2	406	0	5	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8873693-8874108	Cluster_2876	Pocillopora_meandrina_HIv1___Sc0000007	8873693	8874108	416	141	24	0.02127659574468085	-	CCCUUUGCCUCUCCGGC	36	140	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8903235-8903974	Cluster_2877	Pocillopora_meandrina_HIv1___Sc0000007	8903235	8903974	740	510	385	0.996078431372549	+	UUUGGACUUGAGCGAAAGCGUCG	7	130	203	41	37	57	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8910865-8911278	Cluster_2878	Pocillopora_meandrina_HIv1___Sc0000007	8910865	8911278	414	135	76	1.0	+	GCAUGGACUCAGAACGCGAGAUAGC	13	59	47	4	9	12	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8912966-8913668	Cluster_2879	Pocillopora_meandrina_HIv1___Sc0000007	8912966	8913668	703	399	299	0.9849624060150376	+	GUCAAAGGAUAACAGAGAACGGACA	12	122	171	22	32	33	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8992161-8992652	Cluster_2880	Pocillopora_meandrina_HIv1___Sc0000007	8992161	8992652	492	383	175	0.9947780678851175	+	CCUUCGAUAGCUCAGUUGGUAGAGCGGA	40	182	120	26	11	17	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8995452-8995931	Cluster_2881	Pocillopora_meandrina_HIv1___Sc0000007	8995452	8995931	480	70702	2587	0.9984724618822665	+	CCCCCCUCCCCGCCUUAUGACCUCAUC	2926	27467	33913	3879	2669	1364	1410	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8997769-8998243	Cluster_2882	Pocillopora_meandrina_HIv1___Sc0000007	8997769	8998243	475	246937	4233	0.9999271069139092	+	CGCCCCUCCCCGCCCUUUGACCUCAUU	19447	75515	135383	9206	15259	8135	3439	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9006638-9007111	Cluster_2883	Pocillopora_meandrina_HIv1___Sc0000007	9006638	9007111	474	5687	642	0.9998241603657464	+	CGCCCCUCCCCGCCCUUUGACCUCAUU	443	1565	3317	201	342	169	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9011782-9012203	Cluster_2884	Pocillopora_meandrina_HIv1___Sc0000007	9011782	9012203	422	144	52	0.034722222222222224	-	UCGAAUCCGGCUCGAAGGACCA	31	42	17	9	34	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9051304-9051719	Cluster_2885	Pocillopora_meandrina_HIv1___Sc0000007	9051304	9051719	416	171	12	0.0	-	GAGCGUGCUCUUAACC	58	171	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9075748-9076178	Cluster_2886	Pocillopora_meandrina_HIv1___Sc0000007	9075748	9076178	431	522	62	0.009578544061302681	-	UGACAAUCAUGCUGCUAAGUUCCUACGC	162	3	517	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9143220-9143648	Cluster_2887	Pocillopora_meandrina_HIv1___Sc0000007	9143220	9143648	429	348	109	0.034482758620689655	-	AAUGGGAAAACGAGAACAGCGUGA	37	2	187	6	1	60	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9193424-9193829	Cluster_2888	Pocillopora_meandrina_HIv1___Sc0000007	9193424	9193829	406	78	42	0.0	-	UACUUCCACAUUAUGUGCUCCUGAAUCUUC	9	1	77	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9194835-9195263	Cluster_2889	Pocillopora_meandrina_HIv1___Sc0000007	9194835	9195263	429	143	29	0.006993006993006993	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	72	0	140	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9448844-9449271	Cluster_2890	Pocillopora_meandrina_HIv1___Sc0000007	9448844	9449271	428	216	85	0.9861111111111112	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	38	2	198	0	0	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9521199-9521609	Cluster_2891	Pocillopora_meandrina_HIv1___Sc0000007	9521199	9521609	411	123	78	0.983739837398374	+	UGUACUUGAGUAAAGAUUGUUAGAAACU	8	3	113	2	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9521676-9522721	Cluster_2892	Pocillopora_meandrina_HIv1___Sc0000007	9521676	9522721	1046	2447	756	0.9358398038414385	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	247	58	2281	18	19	30	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9522737-9524224	Cluster_2893	Pocillopora_meandrina_HIv1___Sc0000007	9522737	9524224	1488	3934	1320	0.892984239959329	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	124	72	3474	28	37	150	173	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9526563-9527203	Cluster_2894	Pocillopora_meandrina_HIv1___Sc0000007	9526563	9527203	641	344	177	0.37209302325581395	.	UUAUUUCACAUGAUUUGACAGAAGCCCU	23	38	270	5	0	5	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9960932-9961359	Cluster_2895	Pocillopora_meandrina_HIv1___Sc0000007	9960932	9961359	428	115	21	0.991304347826087	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCG	55	2	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9992713-9993127	Cluster_2896	Pocillopora_meandrina_HIv1___Sc0000007	9992713	9993127	415	186	6	0.0	-	UCUGGAGUCUCGGCC	181	186	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10057321-10057751	Cluster_2897	Pocillopora_meandrina_HIv1___Sc0000007	10057321	10057751	431	439	100	0.004555808656036446	-	UAAGACUGACGAAGGCUAAGGUGAACAGC	97	11	417	1	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10058874-10059300	Cluster_2898	Pocillopora_meandrina_HIv1___Sc0000007	10058874	10059300	427	249	78	0.1606425702811245	-	UGUACUUUCUUUGGGCCAUGUAAUCU	44	7	236	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10064882-10065311	Cluster_2899	Pocillopora_meandrina_HIv1___Sc0000007	10064882	10065311	430	289	71	0.15916955017301038	-	UUGUCUGGAUUGUACACUUUGAAGUGCA	32	0	285	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10065356-10065770	Cluster_2900	Pocillopora_meandrina_HIv1___Sc0000007	10065356	10065770	415	221	109	0.9638009049773756	+	AAGGACCGCAGAGUUUUCCAGAUG	32	7	147	5	1	5	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10065934-10066449	Cluster_2901	Pocillopora_meandrina_HIv1___Sc0000007	10065934	10066449	516	1772	380	0.49548532731376976	.	GGAUGCUGAAACCAAUUGAUUAACUGAUC	280	10	1692	2	11	20	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10068802-10069229	Cluster_2902	Pocillopora_meandrina_HIv1___Sc0000007	10068802	10069229	428	121	25	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUG	39	0	113	1	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10079401-10079831	Cluster_2903	Pocillopora_meandrina_HIv1___Sc0000007	10079401	10079831	431	1012	100	0.9990118577075099	+	GGGAUGGACAGUGGUCCAAAAGAGGCUG	272	7	960	2	5	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10085918-10086347	Cluster_2904	Pocillopora_meandrina_HIv1___Sc0000007	10085918	10086347	430	311	66	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUA	115	6	295	1	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10261325-10261861	Cluster_2905	Pocillopora_meandrina_HIv1___Sc0000007	10261325	10261861	537	3099	654	0.1164891900613101	-	ACAAGCGAUAUGUGGACCUUGAUCGGCG	371	108	2798	31	33	35	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10262068-10262496	Cluster_2906	Pocillopora_meandrina_HIv1___Sc0000007	10262068	10262496	429	159	37	0.018867924528301886	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	62	0	150	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10448770-10449183	Cluster_2907	Pocillopora_meandrina_HIv1___Sc0000007	10448770	10449183	414	98	13	1.0	+	GAAACUGCGAAUGGCC	32	98	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10819467-10819894	Cluster_2908	Pocillopora_meandrina_HIv1___Sc0000007	10819467	10819894	428	179	82	0.18435754189944134	-	UUUCCGUUGCAUUAGAGGACUUCUUGUU	56	6	165	4	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10821461-10821888	Cluster_2909	Pocillopora_meandrina_HIv1___Sc0000007	10821461	10821888	428	126	7	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	81	0	126	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10822956-10823396	Cluster_2910	Pocillopora_meandrina_HIv1___Sc0000007	10822956	10823396	441	1316	149	0.050911854103343465	-	UGCGAUCGCCAUGAAAUGAUUCUGGG	396	3	1288	1	7	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11000878-11001308	Cluster_2911	Pocillopora_meandrina_HIv1___Sc0000007	11000878	11001308	431	125	42	0.0	-	UAGGAUCGUUCUAGAAAACCAGCGUAAGAUG	51	0	124	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11011336-11011762	Cluster_2912	Pocillopora_meandrina_HIv1___Sc0000007	11011336	11011762	427	160	78	0.6875	.	UGUUCAACUCUUUCAAUGGCGGCUGUG	24	0	152	0	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11146444-11146933	Cluster_2913	Pocillopora_meandrina_HIv1___Sc0000007	11146444	11146933	490	409	124	0.08557457212713937	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	59	8	343	4	6	13	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11171896-11172325	Cluster_2914	Pocillopora_meandrina_HIv1___Sc0000007	11171896	11172325	430	647	109	0.04327666151468315	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	129	51	418	159	4	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11357092-11357518	Cluster_2915	Pocillopora_meandrina_HIv1___Sc0000007	11357092	11357518	427	246	142	0.9024390243902439	+	UGAGUCGAGGUUAUUCACAAUACGAGC	35	6	212	2	3	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11357756-11358413	Cluster_2916	Pocillopora_meandrina_HIv1___Sc0000007	11357756	11358413	658	1130	304	0.9380530973451328	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	101	5	1089	1	2	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11358633-11359288	Cluster_2917	Pocillopora_meandrina_HIv1___Sc0000007	11358633	11359288	656	565	280	0.5893805309734513	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	25	8	509	1	6	19	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11359313-11360089	Cluster_2918	Pocillopora_meandrina_HIv1___Sc0000007	11359313	11360089	777	2452	509	0.9204730831973899	+	UGGAUAUACGUACACAAUCUAGGCUAA	816	16	2353	19	1	19	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11760920-11761348	Cluster_2919	Pocillopora_meandrina_HIv1___Sc0000007	11760920	11761348	429	90	24	0.9888888888888889	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	32	1	88	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11764005-11764426	Cluster_2920	Pocillopora_meandrina_HIv1___Sc0000007	11764005	11764426	422	206	118	0.8786407766990292	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	11	1	195	1	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11764448-11764878	Cluster_2921	Pocillopora_meandrina_HIv1___Sc0000007	11764448	11764878	431	332	162	0.9548192771084337	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	20	4	312	1	3	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11769398-11769827	Cluster_2922	Pocillopora_meandrina_HIv1___Sc0000007	11769398	11769827	430	188	32	1.0	+	UGUGUGACUUUGUAUGUAUAUUGAGCGU	39	0	186	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11931412-11931839	Cluster_2923	Pocillopora_meandrina_HIv1___Sc0000007	11931412	11931839	428	100	17	0.02	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	3	93	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11943905-11944332	Cluster_2924	Pocillopora_meandrina_HIv1___Sc0000007	11943905	11944332	428	268	134	0.7686567164179104	.	UAGGGCUAACGAACACUGGUUGGACAGU	50	25	219	13	5	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12003983-12004397	Cluster_2925	Pocillopora_meandrina_HIv1___Sc0000007	12003983	12004397	415	143	27	0.027972027972027972	-	GUCCUUCCGGCCGGA	92	143	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12067431-12068032	Cluster_2926	Pocillopora_meandrina_HIv1___Sc0000007	12067431	12068032	602	604	188	0.0033112582781456954	-	UGAUGUUAUACUGUGAAAUCUCGUACCCGG	52	4	587	2	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12077062-12077488	Cluster_2927	Pocillopora_meandrina_HIv1___Sc0000007	12077062	12077488	427	241	68	1.0	+	UAUUACGGCUGUUGACUAUCCUUG	46	30	138	6	1	1	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12231846-12232275	Cluster_2928	Pocillopora_meandrina_HIv1___Sc0000007	12231846	12232275	430	258	49	0.7131782945736435	.	UACCAUAGAACUUUCCAGAACAUUUCAUC	77	0	245	2	0	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12251246-12251725	Cluster_2929	Pocillopora_meandrina_HIv1___Sc0000007	12251246	12251725	480	157688	4214	0.0015790675257470448	-	GUGGUCCGGACGGUCGAGGGUUAUCAAUCC	12389	26583	117456	2637	3223	3178	4611	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12429572-12429986	Cluster_2930	Pocillopora_meandrina_HIv1___Sc0000007	12429572	12429986	415	129	17	0.9922480620155039	+	GUGUAGAAUAAGUGA	55	125	1	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12436572-12437198	Cluster_2931	Pocillopora_meandrina_HIv1___Sc0000007	12436572	12437198	627	992	298	0.28125	.	UUAUACUUUAGAAUCUGAAGAGUGCUCGUC	54	19	934	9	5	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12437496-12438544	Cluster_2932	Pocillopora_meandrina_HIv1___Sc0000007	12437496	12438544	1049	1695	462	0.30265486725663715	.	UGUAACUUUGAGCUUCUUUUUUGCAGGA	237	17	1618	0	10	24	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12458859-12459274	Cluster_2933	Pocillopora_meandrina_HIv1___Sc0000007	12458859	12459274	416	126	19	0.0	-	UCACGUCGGGGUCACA	51	126	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12492901-12493331	Cluster_2934	Pocillopora_meandrina_HIv1___Sc0000007	12492901	12493331	431	632	105	0.9588607594936709	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	284	6	616	0	0	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12497064-12497660	Cluster_2935	Pocillopora_meandrina_HIv1___Sc0000007	12497064	12497660	597	920	194	0.06086956521739131	-	UCUUAACUGUUAUCUUGGGCGCAGGAGC	177	5	901	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12497864-12498464	Cluster_2936	Pocillopora_meandrina_HIv1___Sc0000007	12497864	12498464	601	1253	285	0.2833200319233839	.	CACGAUCUCAUUGUGAAGAAGUUCAAAGA	226	19	1215	2	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12509623-12510050	Cluster_2937	Pocillopora_meandrina_HIv1___Sc0000007	12509623	12510050	428	146	49	0.0958904109589041	-	UGAACGCAGAACAGUAGGCCCGUUGGUGA	27	8	126	1	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12510339-12510869	Cluster_2938	Pocillopora_meandrina_HIv1___Sc0000007	12510339	12510869	531	562	139	0.15302491103202848	-	UGAAAACUUUGAACAGACUUUACCUGAAAA	121	2	552	1	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12517059-12517588	Cluster_2939	Pocillopora_meandrina_HIv1___Sc0000007	12517059	12517588	530	582	236	0.012027491408934709	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	25	1	565	2	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12517709-12518138	Cluster_2940	Pocillopora_meandrina_HIv1___Sc0000007	12517709	12518138	430	548	113	0.014598540145985401	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	131	1	540	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12521364-12521816	Cluster_2941	Pocillopora_meandrina_HIv1___Sc0000007	12521364	12521816	453	634	290	0.20977917981072555	.	UAUACCUUUGAUUCAUAGCCUUUCUGAU	29	13	554	10	7	11	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12522582-12523010	Cluster_2942	Pocillopora_meandrina_HIv1___Sc0000007	12522582	12523010	429	424	113	0.03773584905660377	-	UGUAGAAUCAAUCUGUUACUAAGACACC	108	5	399	8	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12538793-12539221	Cluster_2943	Pocillopora_meandrina_HIv1___Sc0000007	12538793	12539221	429	103	19	0.0	-	UGAGUUCUACUGUAACGACUGAAUAGACU	36	0	98	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12539420-12539844	Cluster_2944	Pocillopora_meandrina_HIv1___Sc0000007	12539420	12539844	425	82	32	0.036585365853658534	-	UGCGAAAUGGAUUAUUUACUCUCGGCGGGC	14	2	78	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12541488-12541918	Cluster_2945	Pocillopora_meandrina_HIv1___Sc0000007	12541488	12541918	431	506	93	0.019762845849802372	-	UUGGAAUUCGAAGCAAGUAGCAAUAGA	120	21	421	1	1	3	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12543827-12544865	Cluster_2946	Pocillopora_meandrina_HIv1___Sc0000007	12543827	12544865	1039	3955	839	0.018710493046776234	-	UAUUACACUGUGUCAAAUAGCGUGCCUGA	607	44	3831	18	11	19	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12544927-12545504	Cluster_2947	Pocillopora_meandrina_HIv1___Sc0000007	12544927	12545504	578	238	75	0.008403361344537815	-	CUCCUGACUGGCGCU	65	71	161	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12560397-12560811	Cluster_2948	Pocillopora_meandrina_HIv1___Sc0000007	12560397	12560811	415	5146	57	0.9996113486202876	+	GUGGUCGAGGCGAGA	4741	5144	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12573621-12574763	Cluster_2949	Pocillopora_meandrina_HIv1___Sc0000007	12573621	12574763	1143	2130	451	0.08685446009389672	-	UAUGUGUAUUAUUCUUGUUGCUAACAUCA	448	26	1910	13	58	80	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12578997-12579419	Cluster_2950	Pocillopora_meandrina_HIv1___Sc0000007	12578997	12579419	423	86	27	0.011627906976744186	-	UCUGGCAGCUCUUGCGAUUUCCUGUAAAG	33	2	80	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12585902-12586630	Cluster_2951	Pocillopora_meandrina_HIv1___Sc0000007	12585902	12586630	729	892	249	0.026905829596412557	-	UACAAACAACAGAAUGUUCGAACGGCUCGAC	99	23	850	4	3	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12590176-12590607	Cluster_2952	Pocillopora_meandrina_HIv1___Sc0000007	12590176	12590607	432	900	154	0.025555555555555557	-	UGAUAUACUGUGCAAGAGCCUGUAAA	293	5	845	2	4	43	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12591473-12591879	Cluster_2953	Pocillopora_meandrina_HIv1___Sc0000007	12591473	12591879	407	125	68	0.464	.	GGAAAUAUCAAGUAAAGAUCGGCCGUCAUG	16	15	102	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12595830-12596316	Cluster_2954	Pocillopora_meandrina_HIv1___Sc0000007	12595830	12596316	487	4043	263	0.009151620084095969	-	UGGUUUGAUUGUCAGCAGUAGAUGAAAUG	1280	50	3897	14	10	10	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12596390-12598169	Cluster_2955	Pocillopora_meandrina_HIv1___Sc0000007	12596390	12598169	1780	15387	887	0.0018197179437187236	-	UCAUAAACUCAUUGAUCCUCUUAACAU	5348	86	15091	20	15	94	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12598812-12601054	Cluster_2956	Pocillopora_meandrina_HIv1___Sc0000007	12598812	12601054	2243	7499	2190	0.0774769969329244	-	UAUGUACGAUUUUAACUGGAAGAAACGUU	331	157	7010	30	48	86	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12601338-12601763	Cluster_2957	Pocillopora_meandrina_HIv1___Sc0000007	12601338	12601763	426	124	68	0.0	-	UUUAUACGGUCUUUUUUCUUUGGGAUUUGA	15	2	119	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12607904-12608331	Cluster_2958	Pocillopora_meandrina_HIv1___Sc0000007	12607904	12608331	428	189	74	0.0	-	UCUGCUAUCUGACGCUCUGAACACUGGUC	30	2	185	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12608475-12609228	Cluster_2959	Pocillopora_meandrina_HIv1___Sc0000007	12608475	12609228	754	5937	489	0.010442984672393464	-	UGAACGAUCUUCUCACCAUCUCUUCUGGAA	1447	22	5871	9	2	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12616872-12617388	Cluster_2960	Pocillopora_meandrina_HIv1___Sc0000007	12616872	12617388	517	1025	254	0.14634146341463414	-	UAUCUCUCCCUUGAAAGCUUAUUUGGGUU	165	20	956	3	4	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12617410-12617991	Cluster_2961	Pocillopora_meandrina_HIv1___Sc0000007	12617410	12617991	582	2471	391	0.03723188992310805	-	UAUCUCUCCCUUGAAAGCUUAUUUUGGUU	846	29	2335	12	16	33	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12619579-12620456	Cluster_2962	Pocillopora_meandrina_HIv1___Sc0000007	12619579	12620456	878	1175	394	0.009361702127659575	-	UCCGAUCUGGGGACCAAACCAUAACCUUUC	67	14	1138	7	3	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12624822-12625236	Cluster_2963	Pocillopora_meandrina_HIv1___Sc0000007	12624822	12625236	415	1282	53	0.9477379095163807	+	CUUUCCGAGGUCGCA	1146	1215	66	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12625344-12625932	Cluster_2964	Pocillopora_meandrina_HIv1___Sc0000007	12625344	12625932	589	612	259	0.0032679738562091504	-	UCCUGAGAGCCUACAGGCAAAGAGAUUGUG	25	9	591	2	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12626251-12626661	Cluster_2965	Pocillopora_meandrina_HIv1___Sc0000007	12626251	12626661	411	183	77	0.01092896174863388	-	UCUGUAAUGGCUUCUGAGUUGCAACUAGC	19	7	172	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12627062-12627490	Cluster_2966	Pocillopora_meandrina_HIv1___Sc0000007	12627062	12627490	429	296	102	0.006756756756756757	-	UUCGAUCACAUCAGGAGAACUUCCAAGGC	38	8	284	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12627799-12628228	Cluster_2967	Pocillopora_meandrina_HIv1___Sc0000007	12627799	12628228	430	357	73	0.008403361344537815	-	UAAUCUAAAUCAGGCUCCGGAAGUCCAAUU	173	6	349	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12631368-12631796	Cluster_2968	Pocillopora_meandrina_HIv1___Sc0000007	12631368	12631796	429	154	71	0.012987012987012988	-	UCUUCCAUAUGUUGGCAACUGUUGUAGUC	28	5	149	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12639716-12640228	Cluster_2969	Pocillopora_meandrina_HIv1___Sc0000007	12639716	12640228	513	3771	384	0.0013259082471492973	-	UCAGUAACUGACCCAGGAUCUUGCUCUUC	1092	25	3672	19	9	7	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12642478-12642981	Cluster_2970	Pocillopora_meandrina_HIv1___Sc0000007	12642478	12642981	504	266	129	0.0037593984962406013	-	UGAUUUGUACGUACAGGGCUUGAUCACGUG	26	10	248	0	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12647061-12647489	Cluster_2971	Pocillopora_meandrina_HIv1___Sc0000007	12647061	12647489	429	245	56	0.0	-	UUCCUGUAACACUUUCACAGAUGCUGACA	104	30	203	0	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12648700-12649127	Cluster_2972	Pocillopora_meandrina_HIv1___Sc0000007	12648700	12649127	428	131	25	0.007633587786259542	-	UGGUUUCUGGAACUGGAGAUCAAGGAGU	81	6	124	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12699562-12699991	Cluster_2973	Pocillopora_meandrina_HIv1___Sc0000007	12699562	12699991	430	561	40	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	342	0	536	0	4	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12746813-12747238	Cluster_2974	Pocillopora_meandrina_HIv1___Sc0000007	12746813	12747238	426	576	64	0.0	-	UGGGAAUACCCCGUGUUGUAGGCA	58	202	142	21	63	66	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12839525-12839948	Cluster_2975	Pocillopora_meandrina_HIv1___Sc0000007	12839525	12839948	424	16200	135	0.0001234567901234568	-	CCGUGUUGUAGGCUU	10154	16115	45	8	8	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12853897-12855168	Cluster_2976	Pocillopora_meandrina_HIv1___Sc0000007	12853897	12855168	1272	1261	506	0.08723235527359238	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	87	15	1188	3	4	21	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12855655-12856465	Cluster_2977	Pocillopora_meandrina_HIv1___Sc0000007	12855655	12856465	811	1232	359	0.09253246753246754	-	UGAAAAUCACUCUGUCCACAUUGAAU	172	19	1115	3	15	43	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12856549-12856975	Cluster_2978	Pocillopora_meandrina_HIv1___Sc0000007	12856549	12856975	427	323	147	0.1021671826625387	-	UCCAAUCACACACAGUUCUCCUGCGGC	71	2	289	3	2	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12857328-12858115	Cluster_2979	Pocillopora_meandrina_HIv1___Sc0000007	12857328	12858115	788	2050	577	0.1073170731707317	-	UGUUACCGGUCUUGCUAACCACUUGGA	187	27	1857	11	23	30	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12867093-12867895	Cluster_2980	Pocillopora_meandrina_HIv1___Sc0000007	12867093	12867895	803	1329	363	0.2708803611738149	.	UCAACCAUGAGAACAGAAAACAGAAGCA	93	17	1261	1	12	7	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12899034-12899568	Cluster_2981	Pocillopora_meandrina_HIv1___Sc0000007	12899034	12899568	535	1350	360	0.08444444444444445	-	UACGUUCCAAUUUUCUAGUAUCACUCGC	171	42	1210	5	9	48	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12940140-12942179	Cluster_2982	Pocillopora_meandrina_HIv1___Sc0000007	12940140	12942179	2040	12432	1749	0.09877734877734878	-	UAUAGAUGUAGCUCUUGGUAUGUGCCA	1917	76	11505	29	94	277	451	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12943889-12944684	Cluster_2983	Pocillopora_meandrina_HIv1___Sc0000007	12943889	12944684	796	3058	586	0.7985611510791367	.	AUUUCUUUCAAUUUGGACUCAGCGAUGGA	318	53	2737	25	31	44	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12945055-12945484	Cluster_2984	Pocillopora_meandrina_HIv1___Sc0000007	12945055	12945484	430	256	55	0.98828125	+	UCCGAAUACACGUGGAAAGGAUAAUUGGGC	179	4	248	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12945924-12946595	Cluster_2985	Pocillopora_meandrina_HIv1___Sc0000007	12945924	12946595	672	887	212	0.9954904171364148	+	UGUUGCAAAAGCUAUGGAAAAGACACCACA	105	17	857	5	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12947360-12947787	Cluster_2986	Pocillopora_meandrina_HIv1___Sc0000007	12947360	12947787	428	4216	199	0.020398481973434534	-	UGUUACUGUAGAUGGGGUUUCCCUAGC	1226	14	3609	3	31	9	550	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12948352-12949360	Cluster_2987	Pocillopora_meandrina_HIv1___Sc0000007	12948352	12949360	1009	3520	774	0.825	+	UGAUUGUACGCUUCCAGACUGCGAAAGG	511	60	3259	19	10	68	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12960835-12961264	Cluster_2988	Pocillopora_meandrina_HIv1___Sc0000007	12960835	12961264	430	454	47	0.004405286343612335	-	UUGAAGACUUUGUGGAUGAAAAGCUAUG	118	3	447	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12962412-12962949	Cluster_2989	Pocillopora_meandrina_HIv1___Sc0000007	12962412	12962949	538	600	164	0.0	-	UGUAGAAAUCGCUUCAAGCUUACGGCUUAGA	57	7	580	0	8	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12980183-12980657	Cluster_2990	Pocillopora_meandrina_HIv1___Sc0000007	12980183	12980657	475	383	152	0.6109660574412533	.	AAGUAAAAAAGUGCGACUGAAGC	41	19	180	8	11	98	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12981420-12982492	Cluster_2991	Pocillopora_meandrina_HIv1___Sc0000007	12981420	12982492	1073	3938	510	0.9184865413915694	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGCG	641	83	3483	8	24	112	228	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12987573-12989325	Cluster_2992	Pocillopora_meandrina_HIv1___Sc0000007	12987573	12989325	1753	22869	2412	0.027548209366391185	-	UUUUUCGAACAGAUCUUCUGGCCAAAGA	1879	172	21518	105	125	276	673	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12990601-12991441	Cluster_2993	Pocillopora_meandrina_HIv1___Sc0000007	12990601	12991441	841	23697	941	0.005528125923112631	-	UCGGUGUUAUGAUUGUUGAAACAGUCCA	14899	86	23186	54	186	118	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12993685-12994114	Cluster_2994	Pocillopora_meandrina_HIv1___Sc0000007	12993685	12994114	430	686	206	0.6486880466472303	.	UUUACGAUCAUCUGACACCUCGUC	115	16	448	1	5	58	158	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13000411-13000840	Cluster_2995	Pocillopora_meandrina_HIv1___Sc0000007	13000411	13000840	430	240	99	0.029166666666666667	-	UGAAAGGAGAUUUAGUAGACUGAAGGAAC	39	3	221	0	5	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13000983-13001963	Cluster_2996	Pocillopora_meandrina_HIv1___Sc0000007	13000983	13001963	981	5000	676	0.005	-	UUCACUCCAGAAUGUAGGACCUCUUUAGCC	269	73	4804	19	29	23	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13011618-13012043	Cluster_2997	Pocillopora_meandrina_HIv1___Sc0000007	13011618	13012043	426	127	42	0.0	-	UGAGAUUCAAAGGCUUGGGUAGACUU	23	3	124	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13012876-13013305	Cluster_2998	Pocillopora_meandrina_HIv1___Sc0000007	13012876	13013305	430	370	148	0.04594594594594595	-	UGAACAUUCCGGUAUUCUUUUCGCUGAAUU	69	10	346	2	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13013702-13014122	Cluster_2999	Pocillopora_meandrina_HIv1___Sc0000007	13013702	13014122	421	146	52	0.7876712328767124	.	AACGUAGCGAACUCGACAAGUAGC	31	9	31	52	0	12	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13014797-13015223	Cluster_3000	Pocillopora_meandrina_HIv1___Sc0000007	13014797	13015223	427	229	125	0.13100436681222707	-	UAUCAAGUGUUCCAGGAUUCUGUCGUC	13	4	207	2	2	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13020809-13021328	Cluster_3001	Pocillopora_meandrina_HIv1___Sc0000007	13020809	13021328	520	911	284	0.20087815587266739	.	UGAUAUGACCUUCGGCAAAAAACUGGA	91	7	791	2	4	26	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13021333-13022809	Cluster_3002	Pocillopora_meandrina_HIv1___Sc0000007	13021333	13022809	1477	2335	841	0.20299785867237688	.	UGUAACUGGUUCACUGCGAUUUUGUAGU	101	20	2037	14	13	83	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13024376-13025543	Cluster_3003	Pocillopora_meandrina_HIv1___Sc0000007	13024376	13025543	1168	2126	669	0.7257761053621825	.	UGCUUGUAGUUGGACCAUGUCUGUGACA	81	70	1886	9	20	33	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13025838-13026267	Cluster_3004	Pocillopora_meandrina_HIv1___Sc0000007	13025838	13026267	430	351	171	0.8917378917378918	+	UCAACUUAUAUAAACUCUUACCAUCACGUA	21	7	327	0	7	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13026728-13027153	Cluster_3005	Pocillopora_meandrina_HIv1___Sc0000007	13026728	13027153	426	165	65	0.2727272727272727	.	UAUUUCCGUUCAUUUAAAUAGCUGUUU	17	33	127	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13031527-13031935	Cluster_3006	Pocillopora_meandrina_HIv1___Sc0000007	13031527	13031935	409	270	175	0.17777777777777778	-	UAGAGACUUUAAGUACUGGAAAUACUUA	12	7	233	8	7	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13032199-13032599	Cluster_3007	Pocillopora_meandrina_HIv1___Sc0000007	13032199	13032599	401	248	156	0.1975806451612903	-	UAAACAGUAGAACCAAUGGGUAAGAUA	13	8	210	3	4	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13032732-13033420	Cluster_3008	Pocillopora_meandrina_HIv1___Sc0000007	13032732	13033420	689	1067	352	0.14807872539831302	-	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	113	15	990	4	4	22	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13039656-13040080	Cluster_3009	Pocillopora_meandrina_HIv1___Sc0000007	13039656	13040080	425	142	64	0.8591549295774648	+	AGAGAUGAUAAGGGACCAGAUCGUUGAA	18	18	95	3	3	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13041094-13041498	Cluster_3010	Pocillopora_meandrina_HIv1___Sc0000007	13041094	13041498	405	239	112	0.13807531380753138	-	UGUUCGCGUAAUUCGGUAUGAAUUUGG	19	4	223	1	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13050160-13050588	Cluster_3011	Pocillopora_meandrina_HIv1___Sc0000007	13050160	13050588	429	113	38	0.008849557522123894	-	UGAUAAUAUCGGACUGUCUCCUGUUGAGA	54	2	109	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13057558-13058799	Cluster_3012	Pocillopora_meandrina_HIv1___Sc0000007	13057558	13058799	1242	11045	1429	0.02000905387052965	-	UCUGACUGACUAACAGGAUAUCUGCUUC	736	49	10746	26	44	61	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13069895-13070307	Cluster_3013	Pocillopora_meandrina_HIv1___Sc0000007	13069895	13070307	413	165	104	0.0	-	UUCUUCACUGCAGUGAGCUCGACGGUCUCGC	10	0	156	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13070719-13071146	Cluster_3014	Pocillopora_meandrina_HIv1___Sc0000007	13070719	13071146	428	359	117	0.0	-	UGGAUUGUCUUCAGUUGGGACGUGAUGC	128	2	348	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13071415-13071899	Cluster_3015	Pocillopora_meandrina_HIv1___Sc0000007	13071415	13071899	485	270	140	0.0	-	UCUGUUCUGGUUCGGGGUAGAUUCCCUGGC	17	5	260	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13084814-13085224	Cluster_3016	Pocillopora_meandrina_HIv1___Sc0000007	13084814	13085224	411	218	116	0.022935779816513763	-	UGAUACUGCAACUUCAUUUCUCUGGAAGA	16	2	207	1	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13086411-13086835	Cluster_3017	Pocillopora_meandrina_HIv1___Sc0000007	13086411	13086835	425	198	94	0.030303030303030304	-	UGUGAAGUGCUAACAAUGAUCUGAAGUGC	46	19	171	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13087131-13087891	Cluster_3018	Pocillopora_meandrina_HIv1___Sc0000007	13087131	13087891	761	283	110	0.02120141342756184	-	UGAUCUUUUUUGUUAGGACCUUCCUACUCUU	69	10	272	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13095271-13095699	Cluster_3019	Pocillopora_meandrina_HIv1___Sc0000007	13095271	13095699	429	268	160	0.17164179104477612	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	25	2	235	1	5	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13096929-13097630	Cluster_3020	Pocillopora_meandrina_HIv1___Sc0000007	13096929	13097630	702	252	127	0.08333333333333333	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	31	2	238	3	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13100219-13100648	Cluster_3021	Pocillopora_meandrina_HIv1___Sc0000007	13100219	13100648	430	162	61	0.012345679012345678	-	UGCACAGACUGACUUUGAAACAUCAAAUAUC	51	2	153	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13348977-13349392	Cluster_3022	Pocillopora_meandrina_HIv1___Sc0000007	13348977	13349392	416	168	11	0.005952380952380952	-	UGACAACUUUUGACA	93	166	0	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13478561-13478977	Cluster_3023	Pocillopora_meandrina_HIv1___Sc0000007	13478561	13478977	417	1310	21	0.0	-	GAGUGUGCUCUUAACCA	908	1310	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13555574-13556003	Cluster_3024	Pocillopora_meandrina_HIv1___Sc0000007	13555574	13556003	430	135	11	0.014814814814814815	-	UGAGUAAACCUUCUUUUAAAUUUGAACAUUU	64	0	135	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:144365-144794	Cluster_3025	Pocillopora_meandrina_HIv1___Sc0000008	144365	144794	430	187	45	0.0	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	81	3	183	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:145548-146144	Cluster_3026	Pocillopora_meandrina_HIv1___Sc0000008	145548	146144	597	5628	520	0.0033759772565742714	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	810	15	5561	4	7	12	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:178210-178625	Cluster_3027	Pocillopora_meandrina_HIv1___Sc0000008	178210	178625	416	170	11	0.9705882352941176	+	GUCUGGAGUCUCGGCA	91	167	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:234988-235415	Cluster_3028	Pocillopora_meandrina_HIv1___Sc0000008	234988	235415	428	141	44	0.0070921985815602835	-	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	22	0	139	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:280280-280695	Cluster_3029	Pocillopora_meandrina_HIv1___Sc0000008	280280	280695	416	117	25	0.0	-	AAGAUUGCUGUAGGCU	20	117	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:597467-597881	Cluster_3030	Pocillopora_meandrina_HIv1___Sc0000008	597467	597881	415	2466	51	1.0	+	CCGUGUUGUAGGCUU	1807	2466	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:636585-637181	Cluster_3031	Pocillopora_meandrina_HIv1___Sc0000008	636585	637181	597	5518	501	0.0030808263863718738	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	805	22	5450	2	5	9	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:806592-807009	Cluster_3032	Pocillopora_meandrina_HIv1___Sc0000008	806592	807009	418	146	9	0.0136986301369863	-	AAGGUGAACAAAGCGAUA	95	145	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:930863-931277	Cluster_3033	Pocillopora_meandrina_HIv1___Sc0000008	930863	931277	415	150	95	0.6133333333333333	.	UUCGGUUCGAACUUUGCAUGAGU	6	11	100	2	7	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:960182-960609	Cluster_3034	Pocillopora_meandrina_HIv1___Sc0000008	960182	960609	428	201	31	0.9950248756218906	+	UAUUAUUCAUCUGCUGUCUUUUUGCCUC	73	1	196	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1007000-1007429	Cluster_3035	Pocillopora_meandrina_HIv1___Sc0000008	1007000	1007429	430	180	44	0.03333333333333333	-	UAAUGUGUGACUUUUUCGCUUUUGUUUUGA	72	1	178	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1058500-1058927	Cluster_3036	Pocillopora_meandrina_HIv1___Sc0000008	1058500	1058927	428	170	58	0.029411764705882353	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	54	2	162	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1087037-1087451	Cluster_3037	Pocillopora_meandrina_HIv1___Sc0000008	1087037	1087451	415	308	9	0.006493506493506494	-	CUUUCCGAGGUCGCA	289	307	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1311747-1312175	Cluster_3038	Pocillopora_meandrina_HIv1___Sc0000008	1311747	1312175	429	149	30	0.026845637583892617	-	AAGAUGUCGAGCGUUUUCCGAACGGAUUG	40	4	137	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1344661-1345210	Cluster_3039	Pocillopora_meandrina_HIv1___Sc0000008	1344661	1345210	550	311	64	0.01607717041800643	-	UUAUGAGUGAACCUUUCAUCGAGAAACAUG	58	5	304	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1357373-1357788	Cluster_3040	Pocillopora_meandrina_HIv1___Sc0000008	1357373	1357788	416	136	21	0.9926470588235294	+	GUAUCUGCACUUGACU	28	135	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1370425-1370839	Cluster_3041	Pocillopora_meandrina_HIv1___Sc0000008	1370425	1370839	415	241	14	0.04979253112033195	-	GUGGAAGGUAGGUCA	224	232	6	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1506278-1506707	Cluster_3042	Pocillopora_meandrina_HIv1___Sc0000008	1506278	1506707	430	251	60	0.00398406374501992	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	85	2	248	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1603032-1603625	Cluster_3043	Pocillopora_meandrina_HIv1___Sc0000008	1603032	1603625	594	532	355	0.9830827067669173	+	UGCUGGCCAAUAACUC	12	244	142	46	33	38	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1604007-1604500	Cluster_3044	Pocillopora_meandrina_HIv1___Sc0000008	1604007	1604500	494	526	388	0.9904942965779467	+	CAUGAUGUGAUUUCGGGACCGACU	8	160	226	27	37	29	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1604636-1605101	Cluster_3045	Pocillopora_meandrina_HIv1___Sc0000008	1604636	1605101	466	567	385	0.9894179894179894	+	CUGAUGAACUGACACGCCACAUGC	9	218	178	64	38	21	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1605572-1606131	Cluster_3046	Pocillopora_meandrina_HIv1___Sc0000008	1605572	1606131	560	539	303	0.9944341372912802	+	GAUGUUGACUGUUUAUCAAGGA	17	117	275	25	40	37	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1783802-1783891	Cluster_3047	Pocillopora_meandrina_HIv1___Sc0000008	1783802	1783891	90	1118	103	0.9955277280858676	+	UAUGUUUUGGCUUGUUCCCA	332	985	12	101	14	4	2	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:1803785-1804208	Cluster_3048	Pocillopora_meandrina_HIv1___Sc0000008	1803785	1804208	424	18189	244	0.9995601737313761	+	CAAUGUUUCGGCUUGUUCCCG	8846	2350	13	15084	345	385	12	21	N	adi-miR-P-novel-6-3p_Acropora_digitifera__Praher_et_al._2021_NA;spi-mir-temp-14_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000008:1917222-1917651	Cluster_3049	Pocillopora_meandrina_HIv1___Sc0000008	1917222	1917651	430	156	42	0.0	-	UGCAACAUGCUUUUUCAUCGUGCUGGACUG	43	1	153	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1921539-1922471	Cluster_3050	Pocillopora_meandrina_HIv1___Sc0000008	1921539	1922471	933	1180	376	0.01694915254237288	-	UGGUCACGUCAUACUUCUGAAUCUUCAAC	243	14	1137	5	3	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1929792-1930221	Cluster_3051	Pocillopora_meandrina_HIv1___Sc0000008	1929792	1930221	430	312	93	0.08974358974358974	-	UGAACAAGUGAGCAAGAUGAUCUUCAUGAA	121	0	298	0	2	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1931349-1931776	Cluster_3052	Pocillopora_meandrina_HIv1___Sc0000008	1931349	1931776	428	136	34	0.0	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	22	1	130	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1933348-1934417	Cluster_3053	Pocillopora_meandrina_HIv1___Sc0000008	1933348	1934417	1070	3788	793	0.3328933474128828	.	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	304	61	3570	28	20	59	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1940796-1941224	Cluster_3054	Pocillopora_meandrina_HIv1___Sc0000008	1940796	1941224	429	95	26	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	37	2	92	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1947797-1948209	Cluster_3055	Pocillopora_meandrina_HIv1___Sc0000008	1947797	1948209	413	122	59	0.0	-	UGUGACUCUGGCUUGUAGAGAGAUUCUGG	10	3	118	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1982269-1982694	Cluster_3056	Pocillopora_meandrina_HIv1___Sc0000008	1982269	1982694	426	115	46	0.017391304347826087	-	UUGGAAGAUUUUGUAGACACAACUGACA	43	3	103	2	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1986496-1986975	Cluster_3057	Pocillopora_meandrina_HIv1___Sc0000008	1986496	1986975	480	5419	315	0.8208156486436612	+	UAUGUUCAGGUUGGGCGAGAUGGAUUCGUC	1258	57	5277	16	12	19	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1988273-1990998	Cluster_3058	Pocillopora_meandrina_HIv1___Sc0000008	1988273	1990998	2726	10259	2099	0.006920752509991227	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1369	175	9841	20	47	45	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2002299-2002723	Cluster_3059	Pocillopora_meandrina_HIv1___Sc0000008	2002299	2002723	425	190	64	0.005263157894736842	-	UGCUCUGAUUGUCUGGCCUUGACCCAGUU	29	4	182	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2004591-2005854	Cluster_3060	Pocillopora_meandrina_HIv1___Sc0000008	2004591	2005854	1264	10476	960	0.056987399770904924	-	UAUUGACAAUGAAUUCGAGACUGACAGUG	2427	95	9901	26	138	77	239	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2007397-2007827	Cluster_3061	Pocillopora_meandrina_HIv1___Sc0000008	2007397	2007827	431	6430	345	0.0009331259720062209	-	UUUGUCACCUCCUUGACUGCUCCUUGAC	1640	23	6311	6	9	5	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2012235-2013269	Cluster_3062	Pocillopora_meandrina_HIv1___Sc0000008	2012235	2013269	1035	2972	584	0.012113055181695828	-	UAUGUCAACUGCUGUCCCUUCUUUUAAAU	853	55	2777	21	23	40	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2013407-2013886	Cluster_3063	Pocillopora_meandrina_HIv1___Sc0000008	2013407	2013886	480	4803	284	0.009785550697480742	-	UUGUCUACAAGAAGCCUGUCCAUUUUGU	3581	246	4521	7	6	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2013935-2014362	Cluster_3064	Pocillopora_meandrina_HIv1___Sc0000008	2013935	2014362	428	374	54	0.0	-	UAGUCCUAAUCAGUCAUUAAAUUUGGUU	184	0	370	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2018903-2019724	Cluster_3065	Pocillopora_meandrina_HIv1___Sc0000008	2018903	2019724	822	41528	1312	0.0026969755345790792	-	UUUCCGUUGCAUUUGAAGACUUCUUGUUAGA	15380	155	40809	145	98	88	233	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2019808-2021489	Cluster_3066	Pocillopora_meandrina_HIv1___Sc0000008	2019808	2021489	1682	1978	808	0.1916076845298281	-	UCUAACGCGUUUGUCUGACAUCCCUUU	159	38	1774	20	31	22	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2022209-2022636	Cluster_3067	Pocillopora_meandrina_HIv1___Sc0000008	2022209	2022636	428	186	95	0.11827956989247312	-	UGACGUCACGAUCUUUGCGCGCUACCAUU	22	10	164	0	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2030130-2031952	Cluster_3068	Pocillopora_meandrina_HIv1___Sc0000008	2030130	2031952	1823	26266	2973	0.0647985989492119	-	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2207	265	24870	88	131	345	567	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2032341-2036047	Cluster_3069	Pocillopora_meandrina_HIv1___Sc0000008	2032341	2036047	3707	91894	4464	0.1841687161294535	-	CACCAAGGUCUUGUAGUCCAGUACAACU	26800	686	88473	228	296	393	1818	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2038372-2038801	Cluster_3070	Pocillopora_meandrina_HIv1___Sc0000008	2038372	2038801	430	476	117	0.014705882352941176	-	UCAACAGCCUGAACUUGUCUUCACAAGACU	123	15	454	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2047846-2048274	Cluster_3071	Pocillopora_meandrina_HIv1___Sc0000008	2047846	2048274	429	237	124	0.12658227848101267	-	UGUGUGCCUUUCUGAGCUGUCUGAUUUC	15	31	198	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2098378-2098857	Cluster_3072	Pocillopora_meandrina_HIv1___Sc0000008	2098378	2098857	480	12636	951	0.00031655587211142766	-	UACAAACAAGUUAAAAUUCUGAGCAGG	693	3965	5884	699	300	736	1052	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2099154-2099629	Cluster_3073	Pocillopora_meandrina_HIv1___Sc0000008	2099154	2099629	476	14546	708	0.0	-	CUGCGAUGAUGACUUAACUUAGGACA	4179	4324	7362	905	379	556	1020	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2104385-2104865	Cluster_3074	Pocillopora_meandrina_HIv1___Sc0000008	2104385	2104865	481	1547	343	0.0006464124111182935	-	UGUGGUGAUGACUUAACUUAGGACA	264	450	702	69	85	115	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2226362-2226785	Cluster_3075	Pocillopora_meandrina_HIv1___Sc0000008	2226362	2226785	424	222	141	0.972972972972973	+	GACGAUGAUUGUCACUACGUGGUU	32	55	65	14	22	13	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2226881-2227306	Cluster_3076	Pocillopora_meandrina_HIv1___Sc0000008	2226881	2227306	426	262	172	0.9961832061068703	+	AUUCGAUCAGAGAUGGACA	13	91	57	31	51	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2242788-2244155	Cluster_3077	Pocillopora_meandrina_HIv1___Sc0000008	2242788	2244155	1368	3991	941	0.19719368579303434	-	UGCUGCAUGUCUACUUGUCGAAGUCCUGGC	244	79	3266	37	23	153	433	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2244216-2244632	Cluster_3078	Pocillopora_meandrina_HIv1___Sc0000008	2244216	2244632	417	121	65	0.19834710743801653	-	UAGAAUCUCUUCACCUAUAUGCAUCAU	21	0	115	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2257518-2258066	Cluster_3079	Pocillopora_meandrina_HIv1___Sc0000008	2257518	2258066	549	336	164	0.6726190476190477	.	UGACUUUAUUUGCGUCACGGAUUAGCUGGC	17	7	262	5	11	28	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2284794-2285207	Cluster_3080	Pocillopora_meandrina_HIv1___Sc0000008	2284794	2285207	414	81	23	0.024691358024691357	-	AGUGCUCUUAACUGA	25	81	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2292406-2292823	Cluster_3081	Pocillopora_meandrina_HIv1___Sc0000008	2292406	2292823	418	668	39	0.9985029940119761	+	GCGACUGCUGCCGAU	316	666	0	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2517345-2517765	Cluster_3082	Pocillopora_meandrina_HIv1___Sc0000008	2517345	2517765	421	132	66	0.0	-	AGUGGUGAUGAAAUUUUUGGU	9	43	38	14	19	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2593578-2594011	Cluster_3083	Pocillopora_meandrina_HIv1___Sc0000008	2593578	2594011	434	1067	191	0.05529522024367385	-	UGUUUCAACUCUUGAAUGAUUCUUGCUU	155	2	1040	6	1	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2645329-2645744	Cluster_3084	Pocillopora_meandrina_HIv1___Sc0000008	2645329	2645744	416	126	22	0.047619047619047616	-	GAGUGUGCUUUUAACC	38	122	1	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2699173-2699588	Cluster_3085	Pocillopora_meandrina_HIv1___Sc0000008	2699173	2699588	416	209	13	0.0	-	GACGGAGCUUGGAGCA	105	209	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2703702-2704150	Cluster_3086	Pocillopora_meandrina_HIv1___Sc0000008	2703702	2704150	449	1036	163	0.2084942084942085	.	UAGGAUAUAUCACUUGCGUAAUUUACA	208	19	976	3	14	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2818399-2818824	Cluster_3087	Pocillopora_meandrina_HIv1___Sc0000008	2818399	2818824	426	113	32	0.9911504424778761	+	UGAACUACUGCUCGUACUCUAGAUGACA	22	0	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2892861-2893278	Cluster_3088	Pocillopora_meandrina_HIv1___Sc0000008	2892861	2893278	418	401	39	0.0024937655860349127	-	UCUUGAUGUUUGAGC	72	397	0	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3044995-3045591	Cluster_3089	Pocillopora_meandrina_HIv1___Sc0000008	3044995	3045591	597	5550	517	0.0034234234234234236	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	862	13	5490	4	0	15	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3152146-3152574	Cluster_3090	Pocillopora_meandrina_HIv1___Sc0000008	3152146	3152574	429	459	172	0.013071895424836602	-	UACAAAGCUCUCACGAAUUCACAAACAGA	58	2	452	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3153044-3153892	Cluster_3091	Pocillopora_meandrina_HIv1___Sc0000008	3153044	3153892	849	1149	425	0.005221932114882507	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	80	9	1126	3	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3154288-3155160	Cluster_3092	Pocillopora_meandrina_HIv1___Sc0000008	3154288	3155160	873	904	393	0.011061946902654867	-	UGCUGAAACGAUUUUGACAGGUUGUCA	56	13	859	4	8	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3155589-3156025	Cluster_3093	Pocillopora_meandrina_HIv1___Sc0000008	3155589	3156025	437	864	267	0.004629629629629629	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	105	4	855	3	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3175109-3175522	Cluster_3094	Pocillopora_meandrina_HIv1___Sc0000008	3175109	3175522	414	90	15	0.0	-	CGGAAUGCGAGUGCA	33	90	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3489845-3490272	Cluster_3095	Pocillopora_meandrina_HIv1___Sc0000008	3489845	3490272	428	156	47	0.9935897435897436	+	UCCGAUUCAGACUCCGAACUUGAUUUUGA	40	10	139	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3576420-3576514	Cluster_3096	Pocillopora_meandrina_HIv1___Sc0000008	3576420	3576514	95	301	50	1.0	+	CGAUGGAACACACAAGUAGAGA	89	37	9	14	180	59	2	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:3603048-3603467	Cluster_3097	Pocillopora_meandrina_HIv1___Sc0000008	3603048	3603467	420	254	7	0.0	-	UAUGUUGCUCGGGUUUUUGA	248	250	2	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3619341-3619435	Cluster_3098	Pocillopora_meandrina_HIv1___Sc0000008	3619341	3619435	95	472	75	0.00423728813559322	-	UGUGCUUUGGUUCAAAAAUGUC	145	173	6	16	210	55	12	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:3682573-3683023	Cluster_3099	Pocillopora_meandrina_HIv1___Sc0000008	3682573	3683023	451	634	95	1.0	+	UCUUGGAGUGUAUCUACAUGAGU	105	84	130	105	132	177	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3792737-3793150	Cluster_3100	Pocillopora_meandrina_HIv1___Sc0000008	3792737	3793150	414	387	283	0.00516795865633075	-	UCAAAGACUGAGGCCAGCAAGACUGAAGA	11	114	152	23	31	41	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3806432-3807174	Cluster_3101	Pocillopora_meandrina_HIv1___Sc0000008	3806432	3807174	743	1126	431	0.007104795737122558	-	UGCUGGCUGAUGGCU	56	495	277	94	69	118	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3945942-3946359	Cluster_3102	Pocillopora_meandrina_HIv1___Sc0000008	3945942	3946359	418	205	107	0.975609756097561	+	UGUCAUAACGCUCUGUCCGAUCGCUGUA	11	7	192	3	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3947424-3947852	Cluster_3103	Pocillopora_meandrina_HIv1___Sc0000008	3947424	3947852	429	369	103	0.989159891598916	+	UCUGACCCGUCACUGAAUAUGAUAAGAGU	93	1	360	0	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3948492-3949248	Cluster_3104	Pocillopora_meandrina_HIv1___Sc0000008	3948492	3949248	757	496	259	0.9778225806451613	+	UGAUUUUGAUAAACUCUGCUAUGUUCGGGA	36	8	474	3	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3949632-3950045	Cluster_3105	Pocillopora_meandrina_HIv1___Sc0000008	3949632	3950045	414	226	129	0.9911504424778761	+	CUGGCUGCGGAUGUC	11	19	198	0	4	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3950885-3951344	Cluster_3106	Pocillopora_meandrina_HIv1___Sc0000008	3950885	3951344	460	763	210	0.17300131061598953	-	UAAACAACAGAAAGUCCUUUGAAACGUG	174	9	742	3	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3961410-3963407	Cluster_3107	Pocillopora_meandrina_HIv1___Sc0000008	3961410	3963407	1998	3890	1352	0.09203084832904884	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	337	43	3627	27	22	40	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3963414-3964385	Cluster_3108	Pocillopora_meandrina_HIv1___Sc0000008	3963414	3964385	972	570	269	0.12982456140350876	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	60	5	526	3	1	11	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3964401-3964832	Cluster_3109	Pocillopora_meandrina_HIv1___Sc0000008	3964401	3964832	432	497	191	0.052313883299798795	-	UAAUUCCAUCUUGCGCUGAUAGCUCGU	48	3	478	0	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3965118-3966291	Cluster_3110	Pocillopora_meandrina_HIv1___Sc0000008	3965118	3966291	1174	864	353	0.056712962962962965	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	77	16	780	4	14	15	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3980226-3980655	Cluster_3111	Pocillopora_meandrina_HIv1___Sc0000008	3980226	3980655	430	4244	249	0.003298774740810556	-	GGUUUCGUAGUGUAGU	917	3686	509	9	9	27	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4396995-4397415	Cluster_3112	Pocillopora_meandrina_HIv1___Sc0000008	4396995	4397415	421	124	28	0.024193548387096774	-	CGUAGAAUGACUGUUACCA	28	47	25	17	2	7	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4433244-4433661	Cluster_3113	Pocillopora_meandrina_HIv1___Sc0000008	4433244	4433661	418	96	14	1.0	+	AACUGUCUGAGUGUCUAU	58	93	1	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4541060-4541481	Cluster_3114	Pocillopora_meandrina_HIv1___Sc0000008	4541060	4541481	422	185	120	0.9891891891891892	+	AGGGCAAGAACUGUCGAAGACA	14	50	63	6	24	26	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4701279-4701707	Cluster_3115	Pocillopora_meandrina_HIv1___Sc0000008	4701279	4701707	429	143	18	0.965034965034965	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	61	0	143	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4946465-4946893	Cluster_3116	Pocillopora_meandrina_HIv1___Sc0000008	4946465	4946893	429	230	20	0.991304347826087	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	94	0	228	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5387738-5387830	Cluster_3117	Pocillopora_meandrina_HIv1___Sc0000008	5387738	5387830	93	1515	135	0.0019801980198019802	-	AACUUUUCUACAAUUCCAGUGGA	265	278	38	126	384	641	48	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:5481836-5482255	Cluster_3118	Pocillopora_meandrina_HIv1___Sc0000008	5481836	5482255	420	1377	82	1.0	+	CUUGAAGCGGUUGGAUCA	361	1371	5	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5492891-5493311	Cluster_3119	Pocillopora_meandrina_HIv1___Sc0000008	5492891	5493311	421	352	17	1.0	+	CGGCUUGAAAAAAAAAAAAA	94	229	0	87	35	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5501737-5502153	Cluster_3120	Pocillopora_meandrina_HIv1___Sc0000008	5501737	5502153	417	2836	25	0.9996473906911142	+	GCGGAUGUGGCGGAAU	1779	2835	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5589028-5589448	Cluster_3121	Pocillopora_meandrina_HIv1___Sc0000008	5589028	5589448	421	129	75	0.15503875968992248	-	UUUCUAGACGAGAUCUUUAGUAAAAAGCA	8	12	101	7	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5816867-5817285	Cluster_3122	Pocillopora_meandrina_HIv1___Sc0000008	5816867	5817285	419	132	10	1.0	+	CCGGGGGAGACGAUGAUUC	110	131	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5996763-5997177	Cluster_3123	Pocillopora_meandrina_HIv1___Sc0000008	5996763	5997177	415	831	11	0.0	-	UCUGGAGUCUCGGCG	818	828	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5997969-5998385	Cluster_3124	Pocillopora_meandrina_HIv1___Sc0000008	5997969	5998385	417	76	6	1.0	+	CGGCCUGAAAAAAAAAA	50	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6100492-6100916	Cluster_3125	Pocillopora_meandrina_HIv1___Sc0000008	6100492	6100916	425	419	70	0.9976133651551312	+	UGGAAAGUGCGUACGAACGAUUU	117	24	4	9	191	157	34	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6124721-6125148	Cluster_3126	Pocillopora_meandrina_HIv1___Sc0000008	6124721	6125148	428	445	55	0.0044943820224719105	-	UGAAAAGAACAAUGAUGUAGCUCGUGCA	323	7	428	1	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6125281-6125771	Cluster_3127	Pocillopora_meandrina_HIv1___Sc0000008	6125281	6125771	491	187	48	0.016042780748663103	-	UGAGAGUUACCACACAAUAAAAGAGUCAUU	38	5	179	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6180844-6181258	Cluster_3128	Pocillopora_meandrina_HIv1___Sc0000008	6180844	6181258	415	136	25	0.08823529411764706	-	CAGGUCUGUGAUGCA	79	126	6	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6307431-6308672	Cluster_3129	Pocillopora_meandrina_HIv1___Sc0000008	6307431	6308672	1242	11262	1540	0.028680518557982596	-	UCUGACUGACUAACAGGAUAUCUGCUUC	759	64	10940	23	34	58	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6310919-6311346	Cluster_3130	Pocillopora_meandrina_HIv1___Sc0000008	6310919	6311346	428	278	153	0.14388489208633093	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	24	2	250	1	3	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6312576-6313277	Cluster_3131	Pocillopora_meandrina_HIv1___Sc0000008	6312576	6313277	702	299	144	0.07357859531772576	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	26	9	282	0	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6470302-6470717	Cluster_3132	Pocillopora_meandrina_HIv1___Sc0000008	6470302	6470717	416	210	92	0.0	-	GUGGUGGACUGCUUGA	82	140	39	6	10	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6495344-6495776	Cluster_3133	Pocillopora_meandrina_HIv1___Sc0000008	6495344	6495776	433	525	153	1.0	+	GCGGAUGUGGCGGAA	262	450	34	12	12	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6512824-6513235	Cluster_3134	Pocillopora_meandrina_HIv1___Sc0000008	6512824	6513235	412	220	148	0.004545454545454545	-	GCGGAUGUGGCGGAA	26	125	46	17	14	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6516001-6516465	Cluster_3135	Pocillopora_meandrina_HIv1___Sc0000008	6516001	6516465	465	201	154	0.0	-	CGAAUGAUGAACAAUGAACGCUUC	4	63	73	15	15	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6516959-6517531	Cluster_3136	Pocillopora_meandrina_HIv1___Sc0000008	6516959	6517531	573	592	261	0.0016891891891891893	-	GCGGAUGUGGCGGAA	170	437	85	21	13	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6523070-6523803	Cluster_3137	Pocillopora_meandrina_HIv1___Sc0000008	6523070	6523803	734	927	637	0.010787486515641856	-	GUGGAUGAUGACAAAA	13	366	288	85	60	69	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6645153-6645568	Cluster_3138	Pocillopora_meandrina_HIv1___Sc0000008	6645153	6645568	416	963	8	0.9979231568016614	+	CGAGUUAGAUAGAAUA	916	961	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6783256-6783685	Cluster_3139	Pocillopora_meandrina_HIv1___Sc0000008	6783256	6783685	430	248	27	0.0	-	AUGGCAAAAACACAUCUUACAUUGGCUGUA	185	25	221	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6870035-6870463	Cluster_3140	Pocillopora_meandrina_HIv1___Sc0000008	6870035	6870463	429	227	46	1.0	+	AAGUGUGAUCUUUCUCUUAUGUGGCUUUG	112	4	214	3	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6906017-6906501	Cluster_3141	Pocillopora_meandrina_HIv1___Sc0000008	6906017	6906501	485	2038	329	0.6864573110893032	.	UCAGAUCGUAUUUCCUCAGUGUACCAUA	272	3	1967	2	12	12	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6913071-6913566	Cluster_3142	Pocillopora_meandrina_HIv1___Sc0000008	6913071	6913566	496	1068	73	0.9765917602996255	+	UCACACCAAUGUCUUCAUCUGUUAGAGA	734	16	1033	4	0	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6918899-6919327	Cluster_3143	Pocillopora_meandrina_HIv1___Sc0000008	6918899	6919327	429	106	16	0.0	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	43	0	106	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7050066-7050481	Cluster_3144	Pocillopora_meandrina_HIv1___Sc0000008	7050066	7050481	416	107	29	0.9906542056074766	+	CGCGGAGUUAAGGUGCA	44	95	3	3	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7168458-7168875	Cluster_3145	Pocillopora_meandrina_HIv1___Sc0000008	7168458	7168875	418	224	69	0.9910714285714286	+	GCUGCGAUGGCCGAGUGG	44	199	9	6	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7228615-7229032	Cluster_3146	Pocillopora_meandrina_HIv1___Sc0000008	7228615	7229032	418	121	78	0.8760330578512396	+	CCGCAGCUCAGUGGGUAGAGCAUCUGACCG	8	45	40	13	12	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7351455-7351902	Cluster_3147	Pocillopora_meandrina_HIv1___Sc0000008	7351455	7351902	448	265	146	0.35471698113207545	.	UGCCGGUAUUCGAGAUUCCUUCCUCUU	15	8	227	4	2	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7352806-7353233	Cluster_3148	Pocillopora_meandrina_HIv1___Sc0000008	7352806	7353233	428	176	75	0.9545454545454546	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	47	2	167	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7654139-7654555	Cluster_3149	Pocillopora_meandrina_HIv1___Sc0000008	7654139	7654555	417	159	23	0.025157232704402517	-	AGGACCUCAGAUCAGGC	48	155	1	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7662276-7662690	Cluster_3150	Pocillopora_meandrina_HIv1___Sc0000008	7662276	7662690	415	119	18	0.9915966386554622	+	GAUUGAGAGCUCUUU	40	117	0	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7698373-7699671	Cluster_3151	Pocillopora_meandrina_HIv1___Sc0000008	7698373	7699671	1299	6782	1589	0.21439103509289295	.	UUUUACACGAUGCUUUGCUUUGGCCUG	366	85	5982	24	287	174	230	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7722489-7722913	Cluster_3152	Pocillopora_meandrina_HIv1___Sc0000008	7722489	7722913	425	86	24	1.0	+	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	40	2	83	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7924005-7924423	Cluster_3153	Pocillopora_meandrina_HIv1___Sc0000008	7924005	7924423	419	447	56	1.0	+	UGUCUGUCUGAGUGUCUGU	70	444	1	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8271763-8272196	Cluster_3154	Pocillopora_meandrina_HIv1___Sc0000008	8271763	8272196	434	810	83	0.020987654320987655	-	UGAAGUUAUCCUAAACUGCAGACUUAGC	232	6	797	2	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8294890-8295317	Cluster_3155	Pocillopora_meandrina_HIv1___Sc0000008	8294890	8295317	428	97	15	0.979381443298969	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	44	0	97	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8299092-8299520	Cluster_3156	Pocillopora_meandrina_HIv1___Sc0000008	8299092	8299520	429	186	67	0.0	-	UGUAUUUACAUUGUAUUGUGAUCGAGACUUG	20	1	183	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8324513-8324978	Cluster_3157	Pocillopora_meandrina_HIv1___Sc0000008	8324513	8324978	466	349	245	1.0	+	AUCAGCGAGCUCAGGAUGCCAU	5	158	95	32	26	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8326178-8326593	Cluster_3158	Pocillopora_meandrina_HIv1___Sc0000008	8326178	8326593	416	306	220	0.9869281045751634	+	AUCUAUGGUAACAUGACUGAAGACU	6	97	118	17	23	19	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8327199-8327616	Cluster_3159	Pocillopora_meandrina_HIv1___Sc0000008	8327199	8327616	418	269	184	1.0	+	GAUGGGACUUGUUAAAAGAGC	11	67	115	29	33	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8393840-8394263	Cluster_3160	Pocillopora_meandrina_HIv1___Sc0000008	8393840	8394263	424	206	132	0.9951456310679612	+	AUAGGACCUUUGACUUAGAUAAGCA	27	48	110	14	6	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8428576-8428997	Cluster_3161	Pocillopora_meandrina_HIv1___Sc0000008	8428576	8428997	422	505	26	0.0	-	CGGCUUGAAAAAAAAAAAAA	104	325	0	93	37	49	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8460959-8461381	Cluster_3162	Pocillopora_meandrina_HIv1___Sc0000008	8460959	8461381	423	207	94	0.9903381642512077	+	UGACAAUGAUGACUUG	20	95	79	9	12	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8497463-8497917	Cluster_3163	Pocillopora_meandrina_HIv1___Sc0000008	8497463	8497917	455	426	81	0.9953051643192489	+	UUCCUUCAUCUGUUAAGUUAUU	88	45	79	14	119	47	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8585185-8585597	Cluster_3164	Pocillopora_meandrina_HIv1___Sc0000008	8585185	8585597	413	88	16	1.0	+	GUGGAAGGUAGGUCG	66	76	5	0	5	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8601588-8602003	Cluster_3165	Pocillopora_meandrina_HIv1___Sc0000008	8601588	8602003	416	245	173	0.9836734693877551	+	UGAGGAGACUGUGUCCAC	7	107	61	28	19	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8602732-8603132	Cluster_3166	Pocillopora_meandrina_HIv1___Sc0000008	8602732	8603132	401	180	147	1.0	+	CAUCUGAAUGUGGUAAUGUGGAAUACUGU	3	70	48	12	14	19	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8604004-8604428	Cluster_3167	Pocillopora_meandrina_HIv1___Sc0000008	8604004	8604428	425	340	244	1.0	+	CUACUGCAAGAAGGGACU	7	145	94	20	41	17	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8635591-8636006	Cluster_3168	Pocillopora_meandrina_HIv1___Sc0000008	8635591	8636006	416	231	7	0.0	-	CCGGACUGUUACAGCA	220	231	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8801064-8801479	Cluster_3169	Pocillopora_meandrina_HIv1___Sc0000008	8801064	8801479	416	537	4	1.0	+	GAGACUUGAAGCGGUA	518	537	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8907187-8907932	Cluster_3170	Pocillopora_meandrina_HIv1___Sc0000008	8907187	8907932	746	1288	319	0.15683229813664595	-	UACCAUAGAACUUUCCAGAACAUUUCAUC	161	35	1052	14	15	129	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8928124-8928539	Cluster_3171	Pocillopora_meandrina_HIv1___Sc0000008	8928124	8928539	416	793	21	0.9974779319041615	+	GUUGGGGCGGUGUUCA	352	791	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9150817-9151232	Cluster_3172	Pocillopora_meandrina_HIv1___Sc0000008	9150817	9151232	416	230	24	0.991304347826087	+	GCUGGAUGAUGAGACC	199	217	3	3	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9290101-9290510	Cluster_3173	Pocillopora_meandrina_HIv1___Sc0000008	9290101	9290510	410	93	35	0.7096774193548387	.	UGUCCACCCCCCACCGGCUGC	17	6	53	19	8	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9303645-9304059	Cluster_3174	Pocillopora_meandrina_HIv1___Sc0000008	9303645	9304059	415	167	24	0.9101796407185628	+	AGGAAACUCUGGUGA	115	156	7	2	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9406621-9407048	Cluster_3175	Pocillopora_meandrina_HIv1___Sc0000008	9406621	9407048	428	229	98	0.9781659388646288	+	UCUGAAUUAUCCCGGGUCUCGGCAUUUUU	20	40	173	6	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9467065-9467478	Cluster_3176	Pocillopora_meandrina_HIv1___Sc0000008	9467065	9467478	414	304	230	0.023026315789473683	-	AGAAUUUGGGCGUGCUGAUGAA	9	111	109	17	30	18	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9469902-9470319	Cluster_3177	Pocillopora_meandrina_HIv1___Sc0000008	9469902	9470319	418	313	223	0.006389776357827476	-	GAGAUGUAGAAAAAUGCAAGGAGU	5	111	112	19	23	18	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9479573-9479980	Cluster_3178	Pocillopora_meandrina_HIv1___Sc0000008	9479573	9479980	408	131	78	0.007633587786259542	-	UACAUCUCUAGGUGCAGGACU	9	32	41	24	8	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9498200-9498707	Cluster_3179	Pocillopora_meandrina_HIv1___Sc0000008	9498200	9498707	508	1625	642	0.9932307692307693	+	CGUGAGACCUAAGGGGCU	69	787	401	109	114	119	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9610951-9611366	Cluster_3180	Pocillopora_meandrina_HIv1___Sc0000008	9610951	9611366	416	86	5	1.0	+	GAAGUUCUGGUUUAAAA	42	86	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9701491-9701891	Cluster_3181	Pocillopora_meandrina_HIv1___Sc0000008	9701491	9701891	401	89	43	0.0	-	UGACGAUUUUCGCGGCUCGAUUUUGU	16	1	87	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9732062-9732478	Cluster_3182	Pocillopora_meandrina_HIv1___Sc0000008	9732062	9732478	417	313	56	0.9808306709265175	+	UGAACUAUGCCUGAAC	81	310	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9778406-9778836	Cluster_3183	Pocillopora_meandrina_HIv1___Sc0000008	9778406	9778836	431	346	86	0.011560693641618497	-	AGUGCAAAUACUCGUGAAAGCUGAUCGCGGU	40	5	322	3	5	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9845969-9846513	Cluster_3184	Pocillopora_meandrina_HIv1___Sc0000008	9845969	9846513	545	1191	236	0.037783375314861464	-	UAACACAACUCGCUUCCGGUCACGACA	184	11	1144	7	2	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9851650-9852069	Cluster_3185	Pocillopora_meandrina_HIv1___Sc0000008	9851650	9852069	420	114	25	0.0	-	AUCUGUGGUUUUUUUAGGGG	70	103	0	3	8	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9981438-9982372	Cluster_3186	Pocillopora_meandrina_HIv1___Sc0000008	9981438	9982372	935	461	183	0.9197396963123644	+	UGAAGCAAUGAAACUCUGCAAGGACACU	31	27	403	2	12	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9982630-9983087	Cluster_3187	Pocillopora_meandrina_HIv1___Sc0000008	9982630	9983087	458	722	221	0.4224376731301939	.	GAAGUCGAUAAGCGUUGGACUCAGAGU	59	25	664	6	8	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10004977-10005392	Cluster_3188	Pocillopora_meandrina_HIv1___Sc0000008	10004977	10005392	416	171	28	1.0	+	CAUGGGUUAGUCGAU	46	165	3	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10037456-10037882	Cluster_3189	Pocillopora_meandrina_HIv1___Sc0000008	10037456	10037882	427	145	47	0.7655172413793103	.	UAGUAUAACUUUGAUCUGAUGAAAAUC	73	0	137	0	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10038202-10038630	Cluster_3190	Pocillopora_meandrina_HIv1___Sc0000008	10038202	10038630	429	409	74	0.9902200488997555	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	291	1	401	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10175855-10176394	Cluster_3191	Pocillopora_meandrina_HIv1___Sc0000008	10175855	10176394	540	405	217	0.0024691358024691358	-	GUGGAACAGCAGAAACUUGAUA	27	101	140	24	56	67	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10220103-10220518	Cluster_3192	Pocillopora_meandrina_HIv1___Sc0000008	10220103	10220518	416	410	17	1.0	+	CGCGGGAUAGAGCAGC	183	410	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10274843-10275272	Cluster_3193	Pocillopora_meandrina_HIv1___Sc0000008	10274843	10275272	430	151	29	0.9735099337748344	+	UGAGUAAACCUUCUUUUAAAUUUGAACAUU	56	1	150	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10367613-10368074	Cluster_3194	Pocillopora_meandrina_HIv1___Sc0000008	10367613	10368074	462	17073	774	0.9970128272711298	+	GGGGAUAUAGCUCAGUGGUAGAGCAUU	3701	2980	9114	949	2132	545	1353	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10463744-10464158	Cluster_3195	Pocillopora_meandrina_HIv1___Sc0000008	10463744	10464158	415	82	15	1.0	+	GUGGCAUUACUGUAGC	39	82	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10491245-10491671	Cluster_3196	Pocillopora_meandrina_HIv1___Sc0000008	10491245	10491671	427	173	74	0.023121387283236993	-	UGUUCUCGGUUAUCAGCUCAGAAAUGCG	17	0	169	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10492738-10493162	Cluster_3197	Pocillopora_meandrina_HIv1___Sc0000008	10492738	10493162	425	97	40	0.020618556701030927	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	0	94	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10559700-10560127	Cluster_3198	Pocillopora_meandrina_HIv1___Sc0000008	10559700	10560127	428	190	75	0.005263157894736842	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	26	5	176	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10632661-10633081	Cluster_3199	Pocillopora_meandrina_HIv1___Sc0000008	10632661	10633081	421	390	21	0.9974358974358974	+	UCUGACGAAGGGCUGACACUA	316	45	0	335	8	2	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10670925-10671345	Cluster_3200	Pocillopora_meandrina_HIv1___Sc0000008	10670925	10671345	421	154	87	0.045454545454545456	-	UGAUCAGGACUUUCAGCAUGGAAUAGA	14	11	132	3	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10678356-10679047	Cluster_3201	Pocillopora_meandrina_HIv1___Sc0000008	10678356	10679047	692	2550	1171	0.9988235294117647	+	GCUGGACGAGAGAAGGA	64	1035	973	137	142	142	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10818437-10818850	Cluster_3202	Pocillopora_meandrina_HIv1___Sc0000008	10818437	10818850	414	80	26	0.0	-	CUCUGUCUCUCUCCGUGU	10	67	4	7	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10871176-10871593	Cluster_3203	Pocillopora_meandrina_HIv1___Sc0000008	10871176	10871593	418	133	22	0.9849624060150376	+	AACUUUUGACAGUGGAUCA	33	133	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10962997-10963437	Cluster_3204	Pocillopora_meandrina_HIv1___Sc0000008	10962997	10963437	441	324	69	0.24074074074074073	.	UAUUCACACGUGUUAUCUCGUCGCUCA	67	8	238	3	1	2	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11053603-11054013	Cluster_3205	Pocillopora_meandrina_HIv1___Sc0000008	11053603	11054013	411	105	49	1.0	+	UAGUGUAUACCUGACGGUUAUUUUUAAUC	17	1	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11058235-11058649	Cluster_3206	Pocillopora_meandrina_HIv1___Sc0000008	11058235	11058649	415	212	164	0.9952830188679245	+	GAUGGUGCCUUGAGGAACUCU	6	50	91	26	12	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11083066-11083481	Cluster_3207	Pocillopora_meandrina_HIv1___Sc0000008	11083066	11083481	416	265	36	0.9962264150943396	+	GGCCGUGGUCGAGGCA	109	263	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11124758-11125185	Cluster_3208	Pocillopora_meandrina_HIv1___Sc0000008	11124758	11125185	428	166	35	0.9939759036144579	+	UGUAAACGGUCUUCUUCAAAUUUCUGGC	50	0	165	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11125517-11125938	Cluster_3209	Pocillopora_meandrina_HIv1___Sc0000008	11125517	11125938	422	128	56	0.9375	+	UGUGUGUAAGUCGAUUGAUAAUAUCUUC	28	3	108	0	2	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11127271-11127696	Cluster_3210	Pocillopora_meandrina_HIv1___Sc0000008	11127271	11127696	426	101	32	0.0297029702970297	-	GUUGACGUGAACGGUGUUAGAUGCCGAGC	30	2	97	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11171418-11171956	Cluster_3211	Pocillopora_meandrina_HIv1___Sc0000008	11171418	11171956	539	908	184	0.998898678414097	+	GUUUUUACCUUCUGGCUGACUGACAGUU	58	267	511	44	18	41	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:107419-107867	Cluster_3212	Pocillopora_meandrina_HIv1___Sc0000009	107419	107867	449	216	60	0.9907407407407407	+	UGGACUUUACAAUCUUGAACGAACGUUA	35	1	212	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:108027-108454	Cluster_3213	Pocillopora_meandrina_HIv1___Sc0000009	108027	108454	428	372	197	0.8763440860215054	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	29	2	339	5	4	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:108788-111195	Cluster_3214	Pocillopora_meandrina_HIv1___Sc0000009	108788	111195	2408	4203	1330	0.927432786105163	+	UGUACAACCAUCCGAUACUCUUGU	676	43	2953	13	23	76	1095	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:111468-112649	Cluster_3215	Pocillopora_meandrina_HIv1___Sc0000009	111468	112649	1182	1639	690	0.8047589993898718	+	CUUUCCGAGGUCGCGA	99	179	1368	10	17	10	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:112800-113227	Cluster_3216	Pocillopora_meandrina_HIv1___Sc0000009	112800	113227	428	542	249	0.8007380073800738	+	UCCGAGAGCUUUGUUCACAUAGGCCAUU	71	53	430	7	11	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:113573-114658	Cluster_3217	Pocillopora_meandrina_HIv1___Sc0000009	113573	114658	1086	1331	535	0.8662659654395192	+	UACAAUAACCUCUGAUUUCACUAAAUG	66	12	1215	6	12	25	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:116221-116648	Cluster_3218	Pocillopora_meandrina_HIv1___Sc0000009	116221	116648	428	263	100	0.14068441064638784	-	AGUAGUUUCACUCUUUGGGCAAAAUAUU	67	24	229	5	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:140077-140504	Cluster_3219	Pocillopora_meandrina_HIv1___Sc0000009	140077	140504	428	148	37	0.02702702702702703	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	66	2	142	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:140964-141380	Cluster_3220	Pocillopora_meandrina_HIv1___Sc0000009	140964	141380	417	186	117	0.010752688172043012	-	AAUGAAAUGUUUAAACGAAAAUAGUAGAAU	17	4	168	5	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:143286-143715	Cluster_3221	Pocillopora_meandrina_HIv1___Sc0000009	143286	143715	430	982	91	0.0	-	UGCAGUGGUUUUCUGGAUCCUGAUUGGGG	207	12	964	4	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:171845-172273	Cluster_3222	Pocillopora_meandrina_HIv1___Sc0000009	171845	172273	429	167	64	0.029940119760479042	-	UGGUAGUGGUUUUUUGGAUCCUGAUUGGU	21	10	149	3	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:201573-202002	Cluster_3223	Pocillopora_meandrina_HIv1___Sc0000009	201573	202002	430	871	141	0.012629161882893225	-	UUCGAUCCUAAAUUCUCUCCAUGCUUCUG	236	13	740	12	21	55	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:239916-241740	Cluster_3224	Pocillopora_meandrina_HIv1___Sc0000009	239916	241740	1825	26448	3044	0.9340592861464004	+	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2188	227	25101	84	138	346	552	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:282982-283409	Cluster_3225	Pocillopora_meandrina_HIv1___Sc0000009	282982	283409	428	176	57	0.022727272727272728	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	74	4	164	2	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:286345-286775	Cluster_3226	Pocillopora_meandrina_HIv1___Sc0000009	286345	286775	431	514	125	0.0038910505836575876	-	GGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	61	9	494	3	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:331520-331945	Cluster_3227	Pocillopora_meandrina_HIv1___Sc0000009	331520	331945	426	192	96	0.546875	.	AACUACUUGAACUGGUUCGCCUUAAUGA	16	20	143	20	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:363140-363673	Cluster_3228	Pocillopora_meandrina_HIv1___Sc0000009	363140	363673	534	3502	249	0.6904625928041119	.	UUACUUAAAUGUUAUUGGUUUGU	764	63	1044	19	1082	1204	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:366415-366844	Cluster_3229	Pocillopora_meandrina_HIv1___Sc0000009	366415	366844	430	887	84	0.0	-	UGCAGUGGUUUUCUGGAUCCUGAUUGGUG	186	22	856	8	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:424369-424783	Cluster_3230	Pocillopora_meandrina_HIv1___Sc0000009	424369	424783	415	122	11	0.0	-	CGACCGUGGUGGACA	110	118	1	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:447553-447981	Cluster_3231	Pocillopora_meandrina_HIv1___Sc0000009	447553	447981	429	260	38	0.007692307692307693	-	UAGGACAACUGAGAAUCCACGUAGACUC	100	0	255	1	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:478711-479133	Cluster_3232	Pocillopora_meandrina_HIv1___Sc0000009	478711	479133	423	343	231	0.2886297376093295	.	CAUCACAUCGUCCACUCUGGCC	11	118	110	27	32	25	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:479265-479689	Cluster_3233	Pocillopora_meandrina_HIv1___Sc0000009	479265	479689	425	255	127	0.00392156862745098	-	CACGUCACUGUCAAAAAA	37	97	95	16	9	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:480273-481320	Cluster_3234	Pocillopora_meandrina_HIv1___Sc0000009	480273	481320	1048	2016	647	0.001488095238095238	-	GCAGUAUGAUGAAAGAUUAUGA	152	615	839	111	239	100	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:492424-492836	Cluster_3235	Pocillopora_meandrina_HIv1___Sc0000009	492424	492836	413	90	25	0.1	-	CGCUACUUUGACCUCAUG	29	85	2	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:504251-504671	Cluster_3236	Pocillopora_meandrina_HIv1___Sc0000009	504251	504671	421	331	34	0.03625377643504532	-	CACUUCCUGGAGUUAAGGCU	120	210	1	115	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:539163-539614	Cluster_3237	Pocillopora_meandrina_HIv1___Sc0000009	539163	539614	452	442	219	0.033936651583710405	-	UGCGGCAUGACCUUUGAAAGGCA	21	105	146	29	62	68	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:554654-555072	Cluster_3238	Pocillopora_meandrina_HIv1___Sc0000009	554654	555072	419	131	67	0.6030534351145038	.	UUAACUCUACGGCGUCAACGACUUUCUU	10	11	86	5	3	6	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:691219-691863	Cluster_3239	Pocillopora_meandrina_HIv1___Sc0000009	691219	691863	645	932	501	0.001072961373390558	-	AAUCUUUCGCAGCAUUUUAGACU	35	279	290	55	94	141	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:692538-692944	Cluster_3240	Pocillopora_meandrina_HIv1___Sc0000009	692538	692944	407	128	56	0.0234375	-	UCAAGAUCUUUCUGUGCAUCCUCUCAUGAA	12	3	122	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:698405-698814	Cluster_3241	Pocillopora_meandrina_HIv1___Sc0000009	698405	698814	410	103	68	0.05825242718446602	-	AGAUGGAAAAAAUUGUGAUCUUUGCA	11	21	58	3	8	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:700978-701398	Cluster_3242	Pocillopora_meandrina_HIv1___Sc0000009	700978	701398	421	173	116	0.0	-	AGGCGUUGGUGCAGGA	6	72	41	21	13	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:710225-710637	Cluster_3243	Pocillopora_meandrina_HIv1___Sc0000009	710225	710637	413	110	40	0.6636363636363637	.	UGGAAAGAAAACACUGGAAAAUUGAUGAUA	18	3	102	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:748276-748690	Cluster_3244	Pocillopora_meandrina_HIv1___Sc0000009	748276	748690	415	91	5	0.0	-	CCCUGCUAGAACCUCU	65	91	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1103767-1104213	Cluster_3245	Pocillopora_meandrina_HIv1___Sc0000009	1103767	1104213	447	2557	261	0.9534610872115761	+	UGAGACAGUACACACGAUUUGAUAU	634	21	2498	3	2	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1104285-1104715	Cluster_3246	Pocillopora_meandrina_HIv1___Sc0000009	1104285	1104715	431	7262	249	0.990085375929496	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	2125	18	6990	104	18	10	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1144902-1145321	Cluster_3247	Pocillopora_meandrina_HIv1___Sc0000009	1144902	1145321	420	85	28	0.011764705882352941	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	18	0	84	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1362205-1363105	Cluster_3248	Pocillopora_meandrina_HIv1___Sc0000009	1362205	1363105	901	1257	346	0.8941925218774861	+	UGAAAUCGUCUAAACGAGAUAACAUCUGCUU	139	16	1165	25	3	10	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1446195-1446622	Cluster_3249	Pocillopora_meandrina_HIv1___Sc0000009	1446195	1446622	428	207	84	0.9903381642512077	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	38	4	197	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1449346-1450167	Cluster_3250	Pocillopora_meandrina_HIv1___Sc0000009	1449346	1450167	822	413	111	0.9757869249394673	+	UAGGACAACUGAGAAUCCACGUAGACUC	127	1	404	2	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1753899-1754316	Cluster_3251	Pocillopora_meandrina_HIv1___Sc0000009	1753899	1754316	418	415	23	0.9927710843373494	+	CGGCCUGAAAAAAAAAAA	174	413	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1843951-1844470	Cluster_3252	Pocillopora_meandrina_HIv1___Sc0000009	1843951	1844470	520	869	247	0.903337169159954	+	UGCUGAAAAUCUGGACUUCUCGUAGAGC	119	8	822	1	1	23	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2086389-2087156	Cluster_3253	Pocillopora_meandrina_HIv1___Sc0000009	2086389	2087156	768	812	227	0.9926108374384236	+	UGAAAGAGAGCGUGCUGUCAAUAUUUAGAC	111	6	792	2	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2594612-2595026	Cluster_3254	Pocillopora_meandrina_HIv1___Sc0000009	2594612	2595026	415	930	12	0.9989247311827957	+	CCGCGACUGCUGCCA	909	930	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2662023-2662460	Cluster_3255	Pocillopora_meandrina_HIv1___Sc0000009	2662023	2662460	438	380	121	0.02894736842105263	-	UCUAGACAAAUAACUCUGAUAUUUA	57	10	348	1	1	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2663671-2664213	Cluster_3256	Pocillopora_meandrina_HIv1___Sc0000009	2663671	2664213	543	360	107	0.4861111111111111	.	CUGGAGUGAAGAAAGAUUUGACCUUA	48	5	336	3	2	12	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3334049-3334469	Cluster_3257	Pocillopora_meandrina_HIv1___Sc0000009	3334049	3334469	421	123	44	0.2764227642276423	.	AUUUGUGCUAGAAAGAAUCCGCC	18	1	88	0	0	31	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3388790-3389212	Cluster_3258	Pocillopora_meandrina_HIv1___Sc0000009	3388790	3389212	423	82	28	0.012195121951219513	-	UGUGUAGAUAUGUCUUUUGGACAGGA	19	0	82	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3732208-3732902	Cluster_3259	Pocillopora_meandrina_HIv1___Sc0000009	3732208	3732902	695	796	350	0.06281407035175879	-	UGACCGUAUUUCUUCAUCCAAUGGCUGAAC	43	18	743	5	5	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3894902-3894992	Cluster_3260	Pocillopora_meandrina_HIv1___Sc0000009	3894902	3894992	91	647	58	0.0015455950540958269	-	UAGCAUAACAUUGUAAGAGAUC	322	74	7	6	504	54	2	22	Y	Adi-Mir-2030_5p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2030-5p;_nve-miR-2030-5p;_spi-miR-temp-40;ami-nve-F-miR-2030-5p_Acropora_millepora_Praher_et_al._2021_NA;adi-nve-F-miR-2030_Acropora_digitifera__Praher_et_al._2021_NA;spi-mir-temp-40_Stylophora_pistillata_Liew_et_al._2014_Close_match_of_nve-miR-2030;eca-nve-F-miR-2030_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;miR-2030_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000009:3944407-3945806	Cluster_3261	Pocillopora_meandrina_HIv1___Sc0000009	3944407	3945806	1400	7575	1215	0.08184818481848184	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	1508	76	7107	23	17	109	243	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3945827-3947085	Cluster_3262	Pocillopora_meandrina_HIv1___Sc0000009	3945827	3947085	1259	1795	574	0.2434540389972145	.	UAACUCCGAUCCGAUGACCUAGAAAGUC	145	14	1662	5	22	36	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3947478-3948158	Cluster_3263	Pocillopora_meandrina_HIv1___Sc0000009	3947478	3948158	681	283	143	0.07773851590106007	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	26	6	255	4	1	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4074794-4075209	Cluster_3264	Pocillopora_meandrina_HIv1___Sc0000009	4074794	4075209	416	161	32	1.0	+	GAGGCUUGAAGCGGUU	52	161	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4102972-4103398	Cluster_3265	Pocillopora_meandrina_HIv1___Sc0000009	4102972	4103398	427	193	22	1.0	+	AAGAGAACUAAGAAAAAAAAAAAAAA	52	2	177	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4224260-4224677	Cluster_3266	Pocillopora_meandrina_HIv1___Sc0000009	4224260	4224677	418	3952	55	0.0005060728744939271	-	CGGACCUCAGAUCAG	1641	3952	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4289522-4290159	Cluster_3267	Pocillopora_meandrina_HIv1___Sc0000009	4289522	4290159	638	601	205	0.11647254575707154	-	UGCUAACAUCGUCCUCUAUCUUGC	25	20	510	6	16	8	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4517540-4518080	Cluster_3268	Pocillopora_meandrina_HIv1___Sc0000009	4517540	4518080	541	562	157	0.798932384341637	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	174	5	531	3	1	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4557501-4557926	Cluster_3269	Pocillopora_meandrina_HIv1___Sc0000009	4557501	4557926	426	97	45	0.0	-	UGACGUCCAAACGAGCCUGAUCUUGAUG	15	1	95	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4558097-4558525	Cluster_3270	Pocillopora_meandrina_HIv1___Sc0000009	4558097	4558525	429	2659	91	0.0	-	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1587	2	2651	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4559322-4559742	Cluster_3271	Pocillopora_meandrina_HIv1___Sc0000009	4559322	4559742	421	91	33	0.02197802197802198	-	UUUUACGCAUGGGCUUUGAUGGU	18	1	63	2	2	21	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4677172-4677589	Cluster_3272	Pocillopora_meandrina_HIv1___Sc0000009	4677172	4677589	418	94	27	0.8617021276595744	+	UGGCCUGAAAAAAAAAAAA	23	41	3	21	6	17	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4705225-4705659	Cluster_3273	Pocillopora_meandrina_HIv1___Sc0000009	4705225	4705659	435	651	147	0.9170506912442397	+	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	59	17	571	10	11	1	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4744138-4744895	Cluster_3274	Pocillopora_meandrina_HIv1___Sc0000009	4744138	4744895	758	935	335	0.9422459893048128	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	82	3	909	1	5	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4746610-4747511	Cluster_3275	Pocillopora_meandrina_HIv1___Sc0000009	4746610	4747511	902	985	335	0.8954314720812183	+	UGAGACUUGUUGUUGGGUAACUGACGUG	136	7	926	8	1	17	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4747548-4749567	Cluster_3276	Pocillopora_meandrina_HIv1___Sc0000009	4747548	4749567	2020	6342	1650	0.8025859350362662	+	UGAAGUCUGACCGGAAGAUCGCAUAGUC	457	241	5649	23	34	181	214	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4759035-4759464	Cluster_3277	Pocillopora_meandrina_HIv1___Sc0000009	4759035	4759464	430	163	39	0.006134969325153374	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	72	1	158	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4760218-4760814	Cluster_3278	Pocillopora_meandrina_HIv1___Sc0000009	4760218	4760814	597	5723	500	0.003319937095928709	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	850	11	5645	1	4	6	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4775410-4776044	Cluster_3279	Pocillopora_meandrina_HIv1___Sc0000009	4775410	4776044	635	661	222	0.06505295007564296	-	UGUAGAAUCAAUCUGUUACUAAGACACC	82	6	620	9	4	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4800371-4800797	Cluster_3280	Pocillopora_meandrina_HIv1___Sc0000009	4800371	4800797	427	159	105	0.1320754716981132	-	UGUUGUCCUUUGUUCAGUCUGAUUAACC	10	1	149	2	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4801045-4802112	Cluster_3281	Pocillopora_meandrina_HIv1___Sc0000009	4801045	4802112	1068	926	333	0.06263498920086392	-	UGAUGUCUUCGACUGCAGAUCUGGCAGC	57	6	850	4	5	21	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4874854-4875270	Cluster_3282	Pocillopora_meandrina_HIv1___Sc0000009	4874854	4875270	417	153	5	1.0	+	CUUGUGAAUAGGCGGGU	123	153	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4930947-4931370	Cluster_3283	Pocillopora_meandrina_HIv1___Sc0000009	4930947	4931370	424	127	37	0.007874015748031496	-	CGAUUGUAGCUCUGAUUUCCAU	14	15	66	5	19	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4943767-4944198	Cluster_3284	Pocillopora_meandrina_HIv1___Sc0000009	4943767	4944198	432	11313	222	0.0005303632988597189	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	3896	4	11302	5	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4948006-4948435	Cluster_3285	Pocillopora_meandrina_HIv1___Sc0000009	4948006	4948435	430	8250	198	0.0013333333333333333	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	5127	20	8146	12	8	11	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4983713-4984141	Cluster_3286	Pocillopora_meandrina_HIv1___Sc0000009	4983713	4984141	429	242	130	0.045454545454545456	-	GCAGCACCUGUACUAUGCCAGCCAUCCUAU	28	36	182	4	7	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4986241-4986667	Cluster_3287	Pocillopora_meandrina_HIv1___Sc0000009	4986241	4986667	427	174	97	0.034482758620689655	-	UGUGCUGCAAUUAACUGAGUUGGAGGAAC	31	21	124	5	6	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5001484-5001912	Cluster_3288	Pocillopora_meandrina_HIv1___Sc0000009	5001484	5001912	429	332	90	0.006024096385542169	-	UUUAGAAGCAUUGUCUGCUGGUCUUCCCA	86	14	298	2	4	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5019555-5020110	Cluster_3289	Pocillopora_meandrina_HIv1___Sc0000009	5019555	5020110	556	614	281	0.9055374592833876	+	UACUCUGUUGGAUGCUCGUAUAUUAUUCAGC	45	15	562	2	4	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5020198-5020606	Cluster_3290	Pocillopora_meandrina_HIv1___Sc0000009	5020198	5020606	409	101	45	0.9702970297029703	+	UGGAAAUUCUGUCGGCUUCAGUGCCAC	21	1	97	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5039382-5039812	Cluster_3291	Pocillopora_meandrina_HIv1___Sc0000009	5039382	5039812	431	3362	252	0.000594883997620464	-	CUUAGAAGCGUUGUCUGCUGGUCUUCCCA	869	52	3272	4	9	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5051287-5051715	Cluster_3292	Pocillopora_meandrina_HIv1___Sc0000009	5051287	5051715	429	283	66	0.07420494699646643	-	CCGUAUUUGAUUGCCGUUUGUUCUCUGC	80	18	253	0	6	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5065799-5066228	Cluster_3293	Pocillopora_meandrina_HIv1___Sc0000009	5065799	5066228	430	3029	156	0.0003301419610432486	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	1253	38	2491	9	47	235	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5076933-5077372	Cluster_3294	Pocillopora_meandrina_HIv1___Sc0000009	5076933	5077372	440	6937	356	0.00836096295228485	-	CGGUACUGGAAUUAACUGAGUUGGACG	1777	92	6602	26	75	63	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5151780-5152209	Cluster_3295	Pocillopora_meandrina_HIv1___Sc0000009	5151780	5152209	430	551	55	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	306	2	526	0	6	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5154880-5155308	Cluster_3296	Pocillopora_meandrina_HIv1___Sc0000009	5154880	5155308	429	209	66	0.0	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	48	5	197	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5167006-5167481	Cluster_3297	Pocillopora_meandrina_HIv1___Sc0000009	5167006	5167481	476	468	70	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	248	6	448	4	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5167505-5167931	Cluster_3298	Pocillopora_meandrina_HIv1___Sc0000009	5167505	5167931	427	89	19	0.9438202247191011	+	ACAACAACAAGGUCCUGUUAUGAAAAUG	42	1	82	3	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5192277-5192678	Cluster_3299	Pocillopora_meandrina_HIv1___Sc0000009	5192277	5192678	402	169	106	0.1242603550295858	-	GCAGCACCUGUACUAUGCCAGCCAUCCUAU	13	32	116	3	8	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5195133-5195564	Cluster_3300	Pocillopora_meandrina_HIv1___Sc0000009	5195133	5195564	432	34945	483	2.8616397195593075e-05	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	14417	53	34781	17	33	22	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5199379-5199854	Cluster_3301	Pocillopora_meandrina_HIv1___Sc0000009	5199379	5199854	476	522	68	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	229	3	515	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5249163-5249609	Cluster_3302	Pocillopora_meandrina_HIv1___Sc0000009	5249163	5249609	447	264	142	0.10984848484848485	-	GCAGCACCUGUACUAUGCCAGCCAUCCUAUC	22	78	157	3	11	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5252243-5252692	Cluster_3303	Pocillopora_meandrina_HIv1___Sc0000009	5252243	5252692	450	31902	609	0.005955739452071971	-	CGGUGCAGGAAUUAACUGAGUUGGACG	9445	1188	26894	1248	861	740	971	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5312552-5312992	Cluster_3304	Pocillopora_meandrina_HIv1___Sc0000009	5312552	5312992	441	14258	468	0.00021040819189227102	-	AGUGCUAGAAUUAACUGAGUUGGACGAACU	2317	231	13633	135	119	83	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5350474-5350892	Cluster_3305	Pocillopora_meandrina_HIv1___Sc0000009	5350474	5350892	419	20160	120	0.000496031746031746	-	AACUUUUGACGGUGGA	14004	20159	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5381072-5381529	Cluster_3306	Pocillopora_meandrina_HIv1___Sc0000009	5381072	5381529	458	18314	679	0.01594408649120891	-	CGGUGCUGAAAUUAACUGAGUUGGAGA	3669	753	12896	274	448	755	3188	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5385815-5386269	Cluster_3307	Pocillopora_meandrina_HIv1___Sc0000009	5385815	5386269	455	1689	158	0.0017761989342806395	-	CUCAAGCCGAGCAGACUGCCUACAAUCU	324	62	1588	15	4	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5426651-5427080	Cluster_3308	Pocillopora_meandrina_HIv1___Sc0000009	5426651	5427080	430	526	204	0.026615969581749048	-	ACAGCACCUGUACUAUGCCAGCCAUCCCAU	58	76	372	26	26	19	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5429088-5429525	Cluster_3309	Pocillopora_meandrina_HIv1___Sc0000009	5429088	5429525	438	1613	145	0.0	-	GGUGCAGGAAUUAACUGAGUUGGACGAACU	482	5	1594	1	5	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5461464-5461895	Cluster_3310	Pocillopora_meandrina_HIv1___Sc0000009	5461464	5461895	432	3987	305	0.003762227238525207	-	AGUGCAGGAAUUAACUGAGUUGGACAAACU	905	120	3724	47	31	23	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5521032-5521460	Cluster_3311	Pocillopora_meandrina_HIv1___Sc0000009	5521032	5521460	429	158	50	0.0	-	CUUAGAAGCAUUGUCUGCUGGUCUUCCCA	36	7	146	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5531819-5532250	Cluster_3312	Pocillopora_meandrina_HIv1___Sc0000009	5531819	5532250	432	29316	367	0.0002387774594078319	-	UGUGCUAGAAUUAACUGAGUUGGAGAAACU	11718	234	26768	112	58	2045	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5573592-5574021	Cluster_3313	Pocillopora_meandrina_HIv1___Sc0000009	5573592	5574021	430	6763	140	0.003992311104539406	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	4389	46	6638	12	5	13	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5616752-5617179	Cluster_3314	Pocillopora_meandrina_HIv1___Sc0000009	5616752	5617179	428	208	70	0.08653846153846154	-	GCAGCACCUGUACUAUGCCAGUCAUCCCAU	23	79	122	0	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5619718-5620348	Cluster_3315	Pocillopora_meandrina_HIv1___Sc0000009	5619718	5620348	631	16688	432	0.008928571428571428	-	GGUGCAGGAAUUAACUGAGUUGGACGAACU	4534	337	15717	149	186	111	188	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5624158-5624633	Cluster_3316	Pocillopora_meandrina_HIv1___Sc0000009	5624158	5624633	476	2138	127	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	1291	11	2086	2	3	2	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5631674-5632098	Cluster_3317	Pocillopora_meandrina_HIv1___Sc0000009	5631674	5632098	425	1229	199	0.9959316517493898	+	AACGAGACCUUGACCU	77	952	103	37	60	47	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5651648-5652075	Cluster_3318	Pocillopora_meandrina_HIv1___Sc0000009	5651648	5652075	428	102	35	0.00980392156862745	-	UACUCCGACACUCCGAUAUGUGAUACUAC	47	1	98	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5684055-5684484	Cluster_3319	Pocillopora_meandrina_HIv1___Sc0000009	5684055	5684484	430	404	121	0.0024752475247524753	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	101	9	381	3	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5689078-5689507	Cluster_3320	Pocillopora_meandrina_HIv1___Sc0000009	5689078	5689507	430	309	141	0.15857605177993528	-	GCAGCACCUGUACUAUGCCAGCCAUCCUA	38	44	228	11	9	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5691732-5692171	Cluster_3321	Pocillopora_meandrina_HIv1___Sc0000009	5691732	5692171	440	3091	253	0.05888062115820123	-	GGUGCUGGAAUUAACUGAGUUGGAAGAAC	775	390	2207	78	85	49	282	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5696195-5696623	Cluster_3322	Pocillopora_meandrina_HIv1___Sc0000009	5696195	5696623	429	140	24	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	84	1	133	3	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5749814-5750260	Cluster_3323	Pocillopora_meandrina_HIv1___Sc0000009	5749814	5750260	447	431	147	0.23665893271461716	.	GCAGCACCUGUACUAUGCCAGCCAUCCUA	47	66	340	3	6	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5753007-5753436	Cluster_3324	Pocillopora_meandrina_HIv1___Sc0000009	5753007	5753436	430	451	83	0.004434589800443459	-	UGUGCUAGAAUUAACUGAGUUGGAGAAAUU	179	14	355	7	11	45	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5808018-5808447	Cluster_3325	Pocillopora_meandrina_HIv1___Sc0000009	5808018	5808447	430	369	63	0.01084010840108401	-	AAGAAUGCGAUAGCCGAUAAAGAAACUACU	179	5	349	2	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5818362-5818790	Cluster_3326	Pocillopora_meandrina_HIv1___Sc0000009	5818362	5818790	429	657	136	0.0045662100456621	-	GGUGCUGGAAUUAACUGAGUUGC	198	67	223	22	19	234	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5821920-5822372	Cluster_3327	Pocillopora_meandrina_HIv1___Sc0000009	5821920	5822372	453	239	86	0.9748953974895398	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	28	0	233	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5822529-5822955	Cluster_3328	Pocillopora_meandrina_HIv1___Sc0000009	5822529	5822955	427	303	171	0.8283828382838284	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	19	3	262	1	4	7	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5823291-5823694	Cluster_3329	Pocillopora_meandrina_HIv1___Sc0000009	5823291	5823694	404	312	177	0.8301282051282052	+	UGAUCAUGUACGGACCGAAGUAAUCCAC	33	1	278	1	4	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5823781-5827409	Cluster_3330	Pocillopora_meandrina_HIv1___Sc0000009	5823781	5827409	3629	6915	2285	0.9018076644974693	+	UGUACAACCAUCCGAUACUCUUGU	651	226	5327	31	51	128	1152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5828075-5829179	Cluster_3331	Pocillopora_meandrina_HIv1___Sc0000009	5828075	5829179	1105	1384	575	0.8822254335260116	+	UACAAUAACCUCUGAUUUCACUAAAUG	60	9	1289	6	17	20	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5846449-5846895	Cluster_3332	Pocillopora_meandrina_HIv1___Sc0000009	5846449	5846895	447	670	152	0.09253731343283582	-	AAGAAUGUGAUAGCCAAUAAAGAAAGUACU	142	24	578	10	1	10	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5849549-5849977	Cluster_3333	Pocillopora_meandrina_HIv1___Sc0000009	5849549	5849977	429	395	132	0.0	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	64	4	380	0	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5856893-5857324	Cluster_3334	Pocillopora_meandrina_HIv1___Sc0000009	5856893	5857324	432	16411	310	0.0006093473889464384	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	7040	18	16372	2	3	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5959840-5960535	Cluster_3335	Pocillopora_meandrina_HIv1___Sc0000009	5959840	5960535	696	1589	239	0.9974826935179358	+	UCCAAUCCCCACCGAGAAAGUAUUCAAUAUU	526	11	1553	8	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5961241-5961669	Cluster_3336	Pocillopora_meandrina_HIv1___Sc0000009	5961241	5961669	429	319	102	1.0	+	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	59	4	302	0	5	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6055347-6055763	Cluster_3337	Pocillopora_meandrina_HIv1___Sc0000009	6055347	6055763	417	232	26	1.0	+	AACGGCCGUGGAUUGGC	123	231	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6213599-6214132	Cluster_3338	Pocillopora_meandrina_HIv1___Sc0000009	6213599	6214132	534	2567	328	0.929879236462797	+	UGAGACAGUACACACGAUUUGAUAUA	520	13	2507	2	2	23	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6222493-6223187	Cluster_3339	Pocillopora_meandrina_HIv1___Sc0000009	6222493	6223187	695	461	204	0.008676789587852495	-	UCUUCAUGAUUUCUUCUACUUUGAAUGUGGC	35	8	443	3	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6234762-6235165	Cluster_3340	Pocillopora_meandrina_HIv1___Sc0000009	6234762	6235165	404	146	50	0.5068493150684932	.	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	40	2	138	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6235925-6236333	Cluster_3341	Pocillopora_meandrina_HIv1___Sc0000009	6235925	6236333	409	120	69	0.675	.	UCCCCUAAGGGAGGCUGUGAACUAAUUUUU	9	36	55	19	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6242821-6243422	Cluster_3342	Pocillopora_meandrina_HIv1___Sc0000009	6242821	6243422	602	3008	323	0.9375	+	UGAAUACACAUUACCAGUGAACUUGACUAC	589	18	2861	15	6	24	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6244745-6246341	Cluster_3343	Pocillopora_meandrina_HIv1___Sc0000009	6244745	6246341	1597	1166	330	0.4854202401372213	.	GAAGAAAAUAUUAAAGGAAAAAGGAAUGAC	98	18	1089	2	18	18	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6247112-6247722	Cluster_3344	Pocillopora_meandrina_HIv1___Sc0000009	6247112	6247722	611	830	306	0.3795180722891566	.	AAAGAGCUGAAAAAAAGAAUGUUUC	120	52	694	12	12	20	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6368610-6369361	Cluster_3345	Pocillopora_meandrina_HIv1___Sc0000009	6368610	6369361	752	805	266	0.9627329192546584	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	70	2	778	4	3	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6369656-6370966	Cluster_3346	Pocillopora_meandrina_HIv1___Sc0000009	6369656	6370966	1311	1601	740	0.9188007495315428	+	UGUGAGAAAAGGAUUGAUCUGUUUUGC	32	14	1472	10	5	23	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6411493-6411909	Cluster_3347	Pocillopora_meandrina_HIv1___Sc0000009	6411493	6411909	417	173	6	0.005780346820809248	-	UAGAAUGUUUACUCGUA	147	173	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6435613-6436040	Cluster_3348	Pocillopora_meandrina_HIv1___Sc0000009	6435613	6436040	428	113	11	0.9911504424778761	+	UACCAAGGUCUUGUAGUCUAGUACAACU	68	0	112	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6437273-6437950	Cluster_3349	Pocillopora_meandrina_HIv1___Sc0000009	6437273	6437950	678	1102	386	0.29310344827586204	.	ACGACACCAACGAACAAGACAUCAUCUGUGG	77	22	973	10	11	15	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6543007-6543435	Cluster_3350	Pocillopora_meandrina_HIv1___Sc0000009	6543007	6543435	429	504	48	0.0	-	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	367	0	495	0	1	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6598009-6598600	Cluster_3351	Pocillopora_meandrina_HIv1___Sc0000009	6598009	6598600	592	3098	364	0.9928986442866365	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	512	16	3005	0	1	61	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6642825-6643239	Cluster_3352	Pocillopora_meandrina_HIv1___Sc0000009	6642825	6643239	415	77	10	0.0	-	UCCGCUACUUUGACCA	59	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6767040-6767452	Cluster_3353	Pocillopora_meandrina_HIv1___Sc0000009	6767040	6767452	413	89	42	0.033707865168539325	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	16	2	82	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6907816-6908244	Cluster_3354	Pocillopora_meandrina_HIv1___Sc0000009	6907816	6908244	429	509	45	0.0	-	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	379	0	506	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7022715-7023189	Cluster_3355	Pocillopora_meandrina_HIv1___Sc0000009	7022715	7023189	475	2727	248	0.9952328566189952	+	GCCUCCGUAGCUCAGG	1066	2547	95	35	33	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7083481-7083890	Cluster_3356	Pocillopora_meandrina_HIv1___Sc0000009	7083481	7083890	410	172	92	0.9883720930232558	+	UAACGAACUAUGACAGCAAGGGCCUCAC	19	2	168	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7089531-7089940	Cluster_3357	Pocillopora_meandrina_HIv1___Sc0000009	7089531	7089940	410	117	41	0.4444444444444444	.	GUUGUUACAACUGAGGCCGAGGU	23	7	49	2	5	36	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7142342-7143043	Cluster_3358	Pocillopora_meandrina_HIv1___Sc0000009	7142342	7143043	702	278	151	0.9496402877697842	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	20	3	268	0	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7144275-7144701	Cluster_3359	Pocillopora_meandrina_HIv1___Sc0000009	7144275	7144701	427	247	143	0.8623481781376519	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	28	2	226	2	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7160758-7161573	Cluster_3360	Pocillopora_meandrina_HIv1___Sc0000009	7160758	7161573	816	447	144	0.9955257270693513	+	GAAGACAAAAGAGGUUGGAACACGUUACA	56	54	369	4	10	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7178014-7178443	Cluster_3361	Pocillopora_meandrina_HIv1___Sc0000009	7178014	7178443	430	182	54	0.0	-	UCACUCGUAAGUGGUCGCUCGUAAAUACGU	61	4	173	1	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7206122-7206537	Cluster_3362	Pocillopora_meandrina_HIv1___Sc0000009	7206122	7206537	416	169	101	0.3076923076923077	.	CGCGUGAUUACUUUGACUUC	11	95	2	53	15	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7233761-7234185	Cluster_3363	Pocillopora_meandrina_HIv1___Sc0000009	7233761	7234185	425	210	102	0.3904761904761905	.	UGAAACCCUUGAUCUUCCAGAACGGCUUGA	17	1	179	11	5	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7236606-7237022	Cluster_3364	Pocillopora_meandrina_HIv1___Sc0000009	7236606	7237022	417	175	87	0.5028571428571429	.	CUUUGAAGAAGACUGCGCAAGAUAACGAGC	21	8	151	2	3	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7249231-7249658	Cluster_3365	Pocillopora_meandrina_HIv1___Sc0000009	7249231	7249658	428	289	66	1.0	+	UCUGGAAGCGUUAUCUGCUGGUCUGCC	81	7	266	1	1	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7263451-7263879	Cluster_3366	Pocillopora_meandrina_HIv1___Sc0000009	7263451	7263879	429	455	54	0.9978021978021978	+	GAAGACAACAGAGGAUGGAACACAUUACA	193	41	402	4	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7278506-7278932	Cluster_3367	Pocillopora_meandrina_HIv1___Sc0000009	7278506	7278932	427	258	56	1.0	+	UCUGGAAGCGUUAUCUGCUGGUCUGCC	81	3	244	0	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7288102-7288531	Cluster_3368	Pocillopora_meandrina_HIv1___Sc0000009	7288102	7288531	430	358	61	1.0	+	CGGACAUUGAGUCAAAAACAGCUGAUGGU	69	7	345	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7291675-7292101	Cluster_3369	Pocillopora_meandrina_HIv1___Sc0000009	7291675	7292101	427	125	24	0.0	-	GAUGGAAUGUGCUGCACAGGAUAGUGAUU	63	19	92	2	9	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7302743-7303172	Cluster_3370	Pocillopora_meandrina_HIv1___Sc0000009	7302743	7303172	430	213	50	0.9906103286384976	+	UGGAUUAUCAACGUUUAACAGGGAACUUGUU	29	8	200	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7306880-7307308	Cluster_3371	Pocillopora_meandrina_HIv1___Sc0000009	7306880	7307308	429	184	48	0.5380434782608695	.	AACACACGGAAGAAUCAGU	44	64	113	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7320318-7320738	Cluster_3372	Pocillopora_meandrina_HIv1___Sc0000009	7320318	7320738	421	369	276	1.0	+	UGUGUUGUUCUUUGGGGC	6	96	147	26	30	29	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7432988-7433516	Cluster_3373	Pocillopora_meandrina_HIv1___Sc0000009	7432988	7433516	529	921	218	0.17263843648208468	-	AACGCUUGUAAAGAAGAGGCUGAGGUG	89	17	841	6	7	13	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7461286-7461711	Cluster_3374	Pocillopora_meandrina_HIv1___Sc0000009	7461286	7461711	426	197	79	0.08121827411167512	-	AAGGAGAAUAUCCUUCGUGGGCCUGUUCC	30	7	163	1	3	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7540988-7541419	Cluster_3375	Pocillopora_meandrina_HIv1___Sc0000009	7540988	7541419	432	1302	198	0.9377880184331797	+	AUGUAGAGUGUCUUUAAGGUCAAUA	211	50	894	3	14	117	224	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7541597-7542025	Cluster_3376	Pocillopora_meandrina_HIv1___Sc0000009	7541597	7542025	429	163	35	0.8466257668711656	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	51	0	156	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7547952-7548381	Cluster_3377	Pocillopora_meandrina_HIv1___Sc0000009	7547952	7548381	430	481	54	0.9875259875259875	+	UAUAGAGUGGAUGCAUUCUGAUCUUUAC	273	1	476	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7553820-7554722	Cluster_3378	Pocillopora_meandrina_HIv1___Sc0000009	7553820	7554722	903	1131	390	0.9717064544650752	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	192	12	1074	3	4	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7554809-7556026	Cluster_3379	Pocillopora_meandrina_HIv1___Sc0000009	7554809	7556026	1218	866	385	0.9249422632794457	+	UCCACGUCGUCUUUGGGGUUAAAAUACUU	114	16	794	3	5	18	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7556515-7556950	Cluster_3380	Pocillopora_meandrina_HIv1___Sc0000009	7556515	7556950	436	237	103	0.9493670886075949	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	48	1	222	0	1	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7559916-7561557	Cluster_3381	Pocillopora_meandrina_HIv1___Sc0000009	7559916	7561557	1642	2104	626	0.9168250950570342	+	UAUCACACUUGUGCUGCCAUGCUGGACA	74	69	1870	21	7	28	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7580526-7580953	Cluster_3382	Pocillopora_meandrina_HIv1___Sc0000009	7580526	7580953	428	112	28	0.03571428571428571	-	UUCAUGCUCUCGUUGUUCGACUGAACGAAG	26	0	110	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7893231-7893834	Cluster_3383	Pocillopora_meandrina_HIv1___Sc0000009	7893231	7893834	604	414	132	0.27053140096618356	.	CCCUAUCGGGCGCCA	73	83	258	11	5	6	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7900058-7900670	Cluster_3384	Pocillopora_meandrina_HIv1___Sc0000009	7900058	7900670	613	421	180	0.9168646080760094	+	UUCGAAUUGUUUGUGAUCCCACACUUCA	27	20	337	10	4	6	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7951090-7951491	Cluster_3385	Pocillopora_meandrina_HIv1___Sc0000009	7951090	7951491	402	128	48	0.3125	.	UGUAAUACAUGAUAAAAGAACUCCUU	21	0	125	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7954268-7955172	Cluster_3386	Pocillopora_meandrina_HIv1___Sc0000009	7954268	7955172	905	3094	362	0.012281835811247576	-	UCUGGAUUAUAGUCAAGCUCUGUCAUGG	873	2	3025	4	12	23	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7955228-7955635	Cluster_3387	Pocillopora_meandrina_HIv1___Sc0000009	7955228	7955635	408	87	43	0.034482758620689655	-	UGUAACUCAACUAUUUUAAUUUCUGACUGU	8	1	84	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8094772-8095805	Cluster_3388	Pocillopora_meandrina_HIv1___Sc0000009	8094772	8095805	1034	15489	622	0.9965782167990187	+	UUGGAACGUGUUGCUGAACGCUUGUUGU	5970	58	15207	9	22	149	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8095873-8096303	Cluster_3389	Pocillopora_meandrina_HIv1___Sc0000009	8095873	8096303	431	201	92	0.736318407960199	.	GUGGAAUUAAAAGAAGGGACAAUUAACAGU	29	9	181	4	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8101210-8101638	Cluster_3390	Pocillopora_meandrina_HIv1___Sc0000009	8101210	8101638	429	389	74	0.9511568123393316	+	AGUGUGAUCAUUGUCAAAAGACUUUUGCA	157	1	364	0	0	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8101892-8102322	Cluster_3391	Pocillopora_meandrina_HIv1___Sc0000009	8101892	8102322	431	1854	256	0.9724919093851133	+	UGUGUUAGACUUUAACAGGAAAGAAUG	643	15	1784	24	5	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8104117-8105817	Cluster_3392	Pocillopora_meandrina_HIv1___Sc0000009	8104117	8105817	1701	4034	1042	0.7516113039167079	.	UUAUAUCUUCGGUCAAAAAGUGCACUUU	411	73	3588	38	22	130	183	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8109946-8110374	Cluster_3393	Pocillopora_meandrina_HIv1___Sc0000009	8109946	8110374	429	965	134	0.9906735751295337	+	AUGUAGAGUGUCUUUAAGGUCAAUA	162	37	707	2	10	81	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8110551-8111011	Cluster_3394	Pocillopora_meandrina_HIv1___Sc0000009	8110551	8111011	461	185	43	0.8864864864864865	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	38	1	175	1	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8140529-8140952	Cluster_3395	Pocillopora_meandrina_HIv1___Sc0000009	8140529	8140952	424	120	35	0.23333333333333334	.	UCCAUGAUUUGAGGACUUUCCACUG	20	2	91	2	2	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8147702-8148216	Cluster_3396	Pocillopora_meandrina_HIv1___Sc0000009	8147702	8148216	515	820	144	0.27439024390243905	.	GUGUGAAACAUGUGGCCUCAGGCAGAAAGU	152	15	638	1	3	65	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8241861-8242270	Cluster_3397	Pocillopora_meandrina_HIv1___Sc0000009	8241861	8242270	410	171	96	0.4678362573099415	.	ACUGGAUACAAAACUGCUCGAUGC	22	1	115	1	2	6	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8242665-8243092	Cluster_3398	Pocillopora_meandrina_HIv1___Sc0000009	8242665	8243092	428	200	100	0.04	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	47	3	192	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8299725-8300168	Cluster_3399	Pocillopora_meandrina_HIv1___Sc0000009	8299725	8300168	444	462	220	0.20995670995670995	.	UAUGACGUUCCAGAAUCUUUGACAAAA	31	6	429	3	3	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8300696-8301118	Cluster_3400	Pocillopora_meandrina_HIv1___Sc0000009	8300696	8301118	423	122	45	0.01639344262295082	-	UGAAUAGCAUAACUGAUGAACUACGGG	17	0	119	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8380658-8381106	Cluster_3401	Pocillopora_meandrina_HIv1___Sc0000009	8380658	8381106	449	978	51	0.08895705521472393	-	UGCUUCAUUUCCCUGACUGUAGUCAGC	740	1	958	0	0	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9147716-9148131	Cluster_3402	Pocillopora_meandrina_HIv1___Sc0000009	9147716	9148131	416	253	15	0.039525691699604744	-	CGGACCUCAGAUCAGA	188	246	6	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9614509-9614937	Cluster_3403	Pocillopora_meandrina_HIv1___Sc0000009	9614509	9614937	429	136	33	0.16911764705882354	-	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	36	0	133	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9615120-9615544	Cluster_3404	Pocillopora_meandrina_HIv1___Sc0000009	9615120	9615544	425	226	58	0.12831858407079647	-	AUGUAGAGUGUCUUUAAGGUCAAUA	36	0	190	1	1	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9616173-9616897	Cluster_3405	Pocillopora_meandrina_HIv1___Sc0000009	9616173	9616897	725	510	150	0.8313725490196079	+	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	96	5	461	2	5	5	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9653757-9654172	Cluster_3406	Pocillopora_meandrina_HIv1___Sc0000009	9653757	9654172	416	112	4	0.9910714285714286	+	CCUUGCGGCGGGGCCU	107	112	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9689135-9689550	Cluster_3407	Pocillopora_meandrina_HIv1___Sc0000009	9689135	9689550	416	130	5	1.0	+	CCUUGCGGCGGGGCCU	126	130	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9749077-9750247	Cluster_3408	Pocillopora_meandrina_HIv1___Sc0000009	9749077	9750247	1171	1147	436	0.17611159546643418	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	95	14	1065	6	8	18	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9754478-9754902	Cluster_3409	Pocillopora_meandrina_HIv1___Sc0000009	9754478	9754902	425	155	63	0.04516129032258064	-	UAACACAAUGAACCAAGGCACGUCCAGAUA	22	1	140	0	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9992977-9993392	Cluster_3410	Pocillopora_meandrina_HIv1___Sc0000009	9992977	9993392	416	114	54	0.9649122807017544	+	UAUGUCACUUUUGUCGAAUGGUAAAUCGG	19	5	102	1	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10299099-10299522	Cluster_3411	Pocillopora_meandrina_HIv1___Sc0000009	10299099	10299522	424	266	58	0.08270676691729323	-	AUGGACAGAACACAGGAAGUGCU	63	10	90	0	7	132	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10301166-10301592	Cluster_3412	Pocillopora_meandrina_HIv1___Sc0000009	10301166	10301592	427	109	41	0.981651376146789	+	UGGGAUUGCUUACUCCUGGUGUUGGUAUA	17	2	102	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10335940-10336465	Cluster_3413	Pocillopora_meandrina_HIv1___Sc0000009	10335940	10336465	526	27119	1491	0.0008481138685054758	-	CCCCGUGUUGUAGGCUU	2300	12736	7316	703	1458	2860	2046	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10336550-10336970	Cluster_3414	Pocillopora_meandrina_HIv1___Sc0000009	10336550	10336970	421	181	46	0.994475138121547	+	AUCGCUUCUCGGCCUUUUGGC	42	111	1	60	9	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10340558-10341094	Cluster_3415	Pocillopora_meandrina_HIv1___Sc0000009	10340558	10341094	537	7570	1116	0.9993394980184941	+	GUUGCCUCGGUAUAGCACUACCU	420	3780	1731	358	327	1023	351	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10344528-10344967	Cluster_3416	Pocillopora_meandrina_HIv1___Sc0000009	10344528	10344967	440	858	309	0.9941724941724942	+	UGUGAUCAAGGAGGCAGUCCU	54	353	162	142	90	57	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10363328-10363752	Cluster_3417	Pocillopora_meandrina_HIv1___Sc0000009	10363328	10363752	425	296	67	0.0777027027027027	-	AUGGACAGAACACAGGAAGUGCU	59	9	105	5	13	137	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10446213-10446843	Cluster_3418	Pocillopora_meandrina_HIv1___Sc0000009	10446213	10446843	631	518	188	0.9247104247104247	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	67	4	496	5	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10447202-10447646	Cluster_3419	Pocillopora_meandrina_HIv1___Sc0000009	10447202	10447646	445	403	173	0.4218362282878412	.	CGCAUCUUUAUCCAUCACUCAAAGCGGACU	54	5	350	6	2	9	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10480085-10480514	Cluster_3420	Pocillopora_meandrina_HIv1___Sc0000009	10480085	10480514	430	360	134	0.9555555555555556	+	UGAGAAUCUGUUUGGGUCAAUGAUCACAUU	101	13	336	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10482167-10482581	Cluster_3421	Pocillopora_meandrina_HIv1___Sc0000009	10482167	10482581	415	362	184	0.9668508287292817	+	UACAUGAUGAAAGACUGGAUGAUCACUGCC	16	9	344	0	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10482709-10483472	Cluster_3422	Pocillopora_meandrina_HIv1___Sc0000009	10482709	10483472	764	445	269	0.9865168539325843	+	UGCACUCGGAUCUCUACCCAUUCUAUGAGU	17	7	423	1	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10484435-10484992	Cluster_3423	Pocillopora_meandrina_HIv1___Sc0000009	10484435	10484992	558	711	204	0.9704641350210971	+	UCCGGCUCGAAGGACCA	116	340	350	0	3	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10656954-10657383	Cluster_3424	Pocillopora_meandrina_HIv1___Sc0000009	10656954	10657383	430	362	55	0.008287292817679558	-	AUUGUUUGGAUGUGUCUGCAAAUGCAGUGC	97	1	356	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10657567-10657989	Cluster_3425	Pocillopora_meandrina_HIv1___Sc0000009	10657567	10657989	423	137	49	0.291970802919708	.	AUGUAGAGUGUCUUUAAGGUCAAC	48	6	54	1	0	13	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10658624-10659053	Cluster_3426	Pocillopora_meandrina_HIv1___Sc0000009	10658624	10659053	430	704	56	0.9744318181818182	+	AAAGGAAUGACAAACAUCUGCCCCAAAGGU	382	9	690	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10749850-10750278	Cluster_3427	Pocillopora_meandrina_HIv1___Sc0000009	10749850	10750278	429	176	54	0.1534090909090909	-	UUUUCCAUUUCGUCUUUCAGAAAGCUG	32	2	167	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10752547-10752967	Cluster_3428	Pocillopora_meandrina_HIv1___Sc0000009	10752547	10752967	421	198	116	0.015151515151515152	-	UUCUAUACCAUCGCCGAAAUGUCUGGACU	15	4	184	0	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10997752-10999000	Cluster_3429	Pocillopora_meandrina_HIv1___Sc0000009	10997752	10999000	1249	1411	367	0.9659815733522324	+	UAAGAUUUACACACUGAUCGACCAUGU	455	25	1350	4	2	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10999322-11000312	Cluster_3430	Pocillopora_meandrina_HIv1___Sc0000009	10999322	11000312	991	1167	405	0.9160239931448158	+	UCCAAUCACACACAGUUCUCCUGCGGC	71	8	1108	4	5	8	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11001182-11002453	Cluster_3431	Pocillopora_meandrina_HIv1___Sc0000009	11001182	11002453	1272	1230	470	0.9195121951219513	+	UACAAACUGCAAAACGGUCUCACCUGGU	89	10	1167	6	4	15	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11074194-11074670	Cluster_3432	Pocillopora_meandrina_HIv1___Sc0000009	11074194	11074670	477	591	174	0.9949238578680203	+	UUUUUUGAUUUGGCAAAGCUUGAAAUUUCC	181	7	571	1	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11075604-11076014	Cluster_3433	Pocillopora_meandrina_HIv1___Sc0000009	11075604	11076014	411	96	48	1.0	+	UGGAUAAAAACGACUGGGAUAAGAUAUAUGC	14	2	88	0	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11092081-11092707	Cluster_3434	Pocillopora_meandrina_HIv1___Sc0000009	11092081	11092707	627	242	82	0.0	-	UAUUAGUUUUUCCGCUCUUUUGAAGUCU	29	2	240	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11100878-11101287	Cluster_3435	Pocillopora_meandrina_HIv1___Sc0000009	11100878	11101287	410	172	101	0.3546511627906977	.	UGUAUCCAGUAAUGGCGAUUUCGUCGUC	20	3	125	0	2	11	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11101682-11102109	Cluster_3436	Pocillopora_meandrina_HIv1___Sc0000009	11101682	11102109	428	227	113	0.06167400881057269	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	46	3	219	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11246450-11247187	Cluster_3437	Pocillopora_meandrina_HIv1___Sc0000009	11246450	11247187	738	869	317	0.05293440736478711	-	UCCGUGACACAACGACUUUGCCUUGCUU	100	6	844	1	4	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11247357-11247793	Cluster_3438	Pocillopora_meandrina_HIv1___Sc0000009	11247357	11247793	437	458	224	0.20087336244541484	.	UAUGACGUUCCAGAAUCUUUGACAAAA	29	2	428	6	9	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11248328-11248756	Cluster_3439	Pocillopora_meandrina_HIv1___Sc0000009	11248328	11248756	429	131	52	0.007633587786259542	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	15	1	128	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11353108-11354064	Cluster_3440	Pocillopora_meandrina_HIv1___Sc0000009	11353108	11354064	957	2447	243	0.9906007355946056	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	644	7	2422	2	0	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11384201-11384618	Cluster_3441	Pocillopora_meandrina_HIv1___Sc0000009	11384201	11384618	418	201	30	0.9800995024875622	+	GGCGGUGGGAUCUCCU	78	200	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11391214-11391967	Cluster_3442	Pocillopora_meandrina_HIv1___Sc0000009	11391214	11391967	754	457	259	0.028446389496717725	-	UGGUUUACAGCGUGCUUUGAAGGUUUUAA	19	5	432	1	6	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11392410-11392838	Cluster_3443	Pocillopora_meandrina_HIv1___Sc0000009	11392410	11392838	429	154	59	0.012987012987012988	-	UGCUCAUAUCUAAUAGGACAACUGCCGUU	53	3	150	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11533128-11533596	Cluster_3444	Pocillopora_meandrina_HIv1___Sc0000009	11533128	11533596	469	561	148	0.9928698752228164	+	UUUUUUGAUUUGGCAAAGCUUGAAAUUUCC	182	13	536	1	1	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11534538-11534950	Cluster_3445	Pocillopora_meandrina_HIv1___Sc0000009	11534538	11534950	413	95	45	1.0	+	UGGAUAAAAACGACUGGGAUAAGAUAUAUGC	14	1	91	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11551003-11551630	Cluster_3446	Pocillopora_meandrina_HIv1___Sc0000009	11551003	11551630	628	219	96	0.0	-	UAUUAGUUUUUCCGCUCUUUUGAAGUCU	33	0	219	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11649053-11649873	Cluster_3447	Pocillopora_meandrina_HIv1___Sc0000009	11649053	11649873	821	983	304	0.18209562563580875	-	UGACUUCGUGCCAUCUCUUGUGAUUAUU	122	20	886	3	7	13	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11656065-11657100	Cluster_3448	Pocillopora_meandrina_HIv1___Sc0000009	11656065	11657100	1036	417	126	0.14388489208633093	-	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	47	11	315	4	2	16	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11767957-11768545	Cluster_3449	Pocillopora_meandrina_HIv1___Sc0000009	11767957	11768545	589	467	170	0.47109207708779444	.	UGUUAUAUCUGCAUCGGAUGUUAAAGUGC	48	16	431	3	5	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11778166-11778591	Cluster_3450	Pocillopora_meandrina_HIv1___Sc0000009	11778166	11778591	426	211	43	0.004739336492890996	-	UCCGAUUUAAAAGAUUCUUUGUUUGU	139	3	206	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11778872-11779300	Cluster_3451	Pocillopora_meandrina_HIv1___Sc0000009	11778872	11779300	429	223	63	0.026905829596412557	-	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	62	0	221	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11791398-11792259	Cluster_3452	Pocillopora_meandrina_HIv1___Sc0000009	11791398	11792259	862	620	250	0.041935483870967745	-	UGAUGCUGUCGCGUGUACUGCCGAAAAGA	40	7	583	1	2	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11792402-11792830	Cluster_3453	Pocillopora_meandrina_HIv1___Sc0000009	11792402	11792830	429	148	32	0.006756756756756757	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	81	0	146	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11909906-11910334	Cluster_3454	Pocillopora_meandrina_HIv1___Sc0000009	11909906	11910334	429	150	68	0.9933333333333333	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	41	0	145	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11910487-11911021	Cluster_3455	Pocillopora_meandrina_HIv1___Sc0000009	11910487	11911021	535	702	267	0.9943019943019943	+	UAAAUUCGUCUGCAACAGCUUUGUCGC	41	7	681	1	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11935729-11936155	Cluster_3456	Pocillopora_meandrina_HIv1___Sc0000009	11935729	11936155	427	736	191	0.002717391304347826	-	CCCCGUGUUGUAGGCUU	68	424	192	11	21	50	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11937947-11938372	Cluster_3457	Pocillopora_meandrina_HIv1___Sc0000009	11937947	11938372	426	736	195	0.0	-	CCCCGUGUUGUAGGCUU	62	403	183	13	28	67	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11938579-11938989	Cluster_3458	Pocillopora_meandrina_HIv1___Sc0000009	11938579	11938989	411	224	144	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	73	89	10	22	18	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11940165-11940590	Cluster_3459	Pocillopora_meandrina_HIv1___Sc0000009	11940165	11940590	426	731	198	0.0	-	CCCCGUGUUGUAGGCUU	71	406	189	19	24	49	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11940792-11941235	Cluster_3460	Pocillopora_meandrina_HIv1___Sc0000009	11940792	11941235	444	293	178	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	104	117	8	25	22	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11942383-11942808	Cluster_3461	Pocillopora_meandrina_HIv1___Sc0000009	11942383	11942808	426	687	195	0.002911208151382824	-	CCCCGUGUUGUAGGCUU	62	386	159	18	32	56	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11943015-11943451	Cluster_3462	Pocillopora_meandrina_HIv1___Sc0000009	11943015	11943451	437	254	146	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	87	102	9	15	20	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11944601-11945026	Cluster_3463	Pocillopora_meandrina_HIv1___Sc0000009	11944601	11945026	426	716	200	0.0013966480446927375	-	CCCCGUGUUGUAGGCUU	67	433	159	6	29	48	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11945233-11945677	Cluster_3464	Pocillopora_meandrina_HIv1___Sc0000009	11945233	11945677	445	271	169	0.996309963099631	+	GAUACGCUGCUCAUUGA	13	105	98	13	12	20	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11946819-11947244	Cluster_3465	Pocillopora_meandrina_HIv1___Sc0000009	11946819	11947244	426	716	194	0.0	-	CCCCGUGUUGUAGGCUU	56	420	171	15	29	49	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11947451-11947894	Cluster_3466	Pocillopora_meandrina_HIv1___Sc0000009	11947451	11947894	444	255	156	0.996078431372549	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	99	110	9	16	14	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11949037-11949463	Cluster_3467	Pocillopora_meandrina_HIv1___Sc0000009	11949037	11949463	427	730	214	0.0013698630136986301	-	CCCCGUGUUGUAGGCUU	63	401	177	14	29	69	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11949669-11950079	Cluster_3468	Pocillopora_meandrina_HIv1___Sc0000009	11949669	11950079	411	239	153	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	8	74	101	10	14	27	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11951255-11951680	Cluster_3469	Pocillopora_meandrina_HIv1___Sc0000009	11951255	11951680	426	685	176	0.0	-	CCCCGUGUUGUAGGCUU	62	408	144	14	16	63	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11951886-11952329	Cluster_3470	Pocillopora_meandrina_HIv1___Sc0000009	11951886	11952329	444	263	168	0.9961977186311787	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	97	109	13	18	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11953473-11953898	Cluster_3471	Pocillopora_meandrina_HIv1___Sc0000009	11953473	11953898	426	718	190	0.0	-	CCCCGUGUUGUAGGCUU	65	419	173	14	20	50	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11954105-11954515	Cluster_3472	Pocillopora_meandrina_HIv1___Sc0000009	11954105	11954515	411	241	158	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	88	107	5	11	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11955691-11956116	Cluster_3473	Pocillopora_meandrina_HIv1___Sc0000009	11955691	11956116	426	674	193	0.0	-	CCCCGUGUUGUAGGCUU	48	352	162	11	30	65	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11956323-11956765	Cluster_3474	Pocillopora_meandrina_HIv1___Sc0000009	11956323	11956765	443	269	164	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	92	106	9	23	28	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11957909-11958333	Cluster_3475	Pocillopora_meandrina_HIv1___Sc0000009	11957909	11958333	425	345	130	0.0	-	CCCCGUGUUGUAGGCUU	36	190	97	11	8	29	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11958541-11959088	Cluster_3476	Pocillopora_meandrina_HIv1___Sc0000009	11958541	11959088	548	292	165	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	102	112	18	17	25	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11961267-11961693	Cluster_3477	Pocillopora_meandrina_HIv1___Sc0000009	11961267	11961693	427	312	174	0.9967948717948718	+	UUACCUGACGCGGGAGGUACUGUGAUC	11	166	62	29	22	19	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11962448-11962873	Cluster_3478	Pocillopora_meandrina_HIv1___Sc0000009	11962448	11962873	426	717	171	0.0	-	CCCCGUGUUGUAGGCUU	69	430	150	11	34	54	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11963083-11963490	Cluster_3479	Pocillopora_meandrina_HIv1___Sc0000009	11963083	11963490	408	184	133	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	16	66	73	6	9	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11964666-11965091	Cluster_3480	Pocillopora_meandrina_HIv1___Sc0000009	11964666	11965091	426	759	195	0.0013175230566534915	-	CCCCGUGUUGUAGGCUU	66	441	182	18	19	62	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11965298-11965708	Cluster_3481	Pocillopora_meandrina_HIv1___Sc0000009	11965298	11965708	411	221	145	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	67	103	8	12	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11966884-11967310	Cluster_3482	Pocillopora_meandrina_HIv1___Sc0000009	11966884	11967310	427	812	218	0.0024630541871921183	-	CCCCGUGUUGUAGGCUU	69	450	206	19	25	64	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11967516-11967926	Cluster_3483	Pocillopora_meandrina_HIv1___Sc0000009	11967516	11967926	411	250	157	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	91	105	9	10	22	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11969102-11969527	Cluster_3484	Pocillopora_meandrina_HIv1___Sc0000009	11969102	11969527	426	598	179	0.0016722408026755853	-	CCCCGUGUUGUAGGCUU	63	335	163	8	16	43	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11969734-11970173	Cluster_3485	Pocillopora_meandrina_HIv1___Sc0000009	11969734	11970173	440	255	153	0.996078431372549	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	86	105	15	16	14	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11971320-11971744	Cluster_3486	Pocillopora_meandrina_HIv1___Sc0000009	11971320	11971744	425	534	164	0.0	-	CCCCGUGUUGUAGGCUU	48	300	115	18	17	46	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11971952-11972362	Cluster_3487	Pocillopora_meandrina_HIv1___Sc0000009	11971952	11972362	411	232	159	0.9956896551724138	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	90	82	9	19	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11973539-11973962	Cluster_3488	Pocillopora_meandrina_HIv1___Sc0000009	11973539	11973962	424	333	111	0.0	-	CCCCGUGUUGUAGGCUU	36	212	66	12	7	21	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11974176-11974576	Cluster_3489	Pocillopora_meandrina_HIv1___Sc0000009	11974176	11974576	401	138	96	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	49	69	2	3	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11975753-11976177	Cluster_3490	Pocillopora_meandrina_HIv1___Sc0000009	11975753	11976177	425	457	139	0.002188183807439825	-	CCCCGUGUUGUAGGCUU	44	253	112	12	20	29	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11976409-11976947	Cluster_3491	Pocillopora_meandrina_HIv1___Sc0000009	11976409	11976947	539	6765	735	1.0	+	CUACCUCCGAGUGCGGCCCACU	475	3913	502	599	1158	514	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11977971-11978471	Cluster_3492	Pocillopora_meandrina_HIv1___Sc0000009	11977971	11978471	501	5598	632	0.0	-	GGAAUACCCCGUGUUGUAGGCUU	353	2271	1610	231	333	708	445	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11978608-11979162	Cluster_3493	Pocillopora_meandrina_HIv1___Sc0000009	11978608	11979162	555	3282	819	0.9990859232175503	+	GUUGCCUCGGUAUAGCACUACCUCCG	212	1434	980	118	161	430	159	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11980190-11980607	Cluster_3494	Pocillopora_meandrina_HIv1___Sc0000009	11980190	11980607	418	141	66	0.0070921985815602835	-	CCGUGUUGUAGGCUU	15	72	39	4	5	14	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11980810-11981229	Cluster_3495	Pocillopora_meandrina_HIv1___Sc0000009	11980810	11981229	420	177	114	0.9943502824858758	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	55	93	6	3	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11982404-11982828	Cluster_3496	Pocillopora_meandrina_HIv1___Sc0000009	11982404	11982828	425	410	151	0.0	-	CCCCGUGUUGUAGGCUU	34	239	95	7	19	25	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:21013-21421	Cluster_3497	Pocillopora_meandrina_HIv1___Sc0000010	21013	21421	409	172	130	0.7674418604651163	.	AUCUAUUGCUGAACAGACGCAU	5	72	21	28	24	19	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:140324-140751	Cluster_3498	Pocillopora_meandrina_HIv1___Sc0000010	140324	140751	428	212	87	0.9245283018867925	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	89	5	203	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:142520-143192	Cluster_3499	Pocillopora_meandrina_HIv1___Sc0000010	142520	143192	673	459	261	0.7908496732026143	.	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	37	4	379	5	8	18	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:144003-144426	Cluster_3500	Pocillopora_meandrina_HIv1___Sc0000010	144003	144426	424	220	96	0.7272727272727273	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	34	6	197	3	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:177177-177603	Cluster_3501	Pocillopora_meandrina_HIv1___Sc0000010	177177	177603	427	217	54	0.9907834101382489	+	UGUUAAUCGAGAGAAGCAUAGACGCAA	53	1	209	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:189687-190103	Cluster_3502	Pocillopora_meandrina_HIv1___Sc0000010	189687	190103	417	121	11	0.0	-	CUUGGAAUAGAGCGUGU	58	121	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:245476-245890	Cluster_3503	Pocillopora_meandrina_HIv1___Sc0000010	245476	245890	415	2046	5	0.0009775171065493646	-	AGGAGAACGUAGGGU	2040	2045	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:413633-414064	Cluster_3504	Pocillopora_meandrina_HIv1___Sc0000010	413633	414064	432	607	193	0.039538714991762765	-	UAAUGGGAAAACGAGAACAGCGUGAGUGU	32	2	506	4	3	18	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:414179-414606	Cluster_3505	Pocillopora_meandrina_HIv1___Sc0000010	414179	414606	428	555	117	0.05765765765765766	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	162	7	515	4	3	22	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:414708-415135	Cluster_3506	Pocillopora_meandrina_HIv1___Sc0000010	414708	415135	428	129	55	0.09302325581395349	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	3	123	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:684049-684477	Cluster_3507	Pocillopora_meandrina_HIv1___Sc0000010	684049	684477	429	284	117	0.9929577464788732	+	UGAUCUUGCAGAGCACAAUCAGAUUCUGA	41	6	265	2	0	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:685197-685956	Cluster_3508	Pocillopora_meandrina_HIv1___Sc0000010	685197	685956	760	4094	679	0.9982901807523205	+	UCAUGAUCACUUAGAGGGUUUGCACUCAUA	457	88	3926	17	33	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:685970-687014	Cluster_3509	Pocillopora_meandrina_HIv1___Sc0000010	685970	687014	1045	2019	349	0.9990094105993066	+	UAUGCAUCGACUUUCACACAGCACUUAGAUU	325	40	1931	10	1	5	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:687962-688391	Cluster_3510	Pocillopora_meandrina_HIv1___Sc0000010	687962	688391	430	402	191	0.9950248756218906	+	UUUUCUUGUAAUUGACUGUCUAGUUUGCCU	26	5	382	2	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:689527-689956	Cluster_3511	Pocillopora_meandrina_HIv1___Sc0000010	689527	689956	430	501	91	0.998003992015968	+	UGAAAGGAGAUUUAGUAGACUGAAGGAAUA	95	5	477	2	6	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:690399-690828	Cluster_3512	Pocillopora_meandrina_HIv1___Sc0000010	690399	690828	430	249	67	0.9959839357429718	+	UACAUGUGUACUGGUAGAGAAAACCCUCC	62	3	243	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:691758-692158	Cluster_3513	Pocillopora_meandrina_HIv1___Sc0000010	691758	692158	401	147	71	0.9931972789115646	+	UGUUCUAGUCAUUGAAACCUGCAUUUGUU	17	3	141	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:693529-693951	Cluster_3514	Pocillopora_meandrina_HIv1___Sc0000010	693529	693951	423	198	73	0.9848484848484849	+	UGUGUCACGUUCUCAUCUGAAAC	40	6	152	0	0	40	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:697762-698180	Cluster_3515	Pocillopora_meandrina_HIv1___Sc0000010	697762	698180	419	148	68	0.0472972972972973	-	UCUUCCGGUCUGUUUUCGCUUUUUCUGGA	20	7	132	2	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:713480-713909	Cluster_3516	Pocillopora_meandrina_HIv1___Sc0000010	713480	713909	430	214	82	0.985981308411215	+	UGCUUCAUUUUGAGCUUCUCUGAUCAUAUC	74	4	204	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:750689-751093	Cluster_3517	Pocillopora_meandrina_HIv1___Sc0000010	750689	751093	405	106	67	1.0	+	UUUGACGUGAAAGUUUCUGGACUUGUUUC	9	2	100	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:751294-751722	Cluster_3518	Pocillopora_meandrina_HIv1___Sc0000010	751294	751722	429	452	115	0.9911504424778761	+	UAUGACGGUACUUUCAAUGGCUUCAGGC	114	6	415	3	12	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:751991-752775	Cluster_3519	Pocillopora_meandrina_HIv1___Sc0000010	751991	752775	785	4875	457	0.9989743589743589	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	1104	161	4679	3	3	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:755612-756456	Cluster_3520	Pocillopora_meandrina_HIv1___Sc0000010	755612	756456	845	1857	353	0.8395261173936457	+	UAAGUACUGUCGGAGUUGAACCUUUACGGC	666	24	1781	7	12	23	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:761708-762259	Cluster_3521	Pocillopora_meandrina_HIv1___Sc0000010	761708	762259	552	537	161	0.9050279329608939	+	UGAUUAGAAUCGGGAACAACCA	105	8	392	2	107	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:769669-770096	Cluster_3522	Pocillopora_meandrina_HIv1___Sc0000010	769669	770096	428	189	54	0.9947089947089947	+	UUGGAUCUGUCACUUUCUCGUGAUGCAC	60	10	176	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:790303-790772	Cluster_3523	Pocillopora_meandrina_HIv1___Sc0000010	790303	790772	470	916	162	0.962882096069869	+	UAAUCGCAACAGGGAAACUAGACUCCGA	204	8	854	4	3	25	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:794554-795950	Cluster_3524	Pocillopora_meandrina_HIv1___Sc0000010	794554	795950	1397	6621	1513	0.898504757589488	+	AUCCCACCGCUGCCACCA	252	789	5389	36	29	115	263	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:796194-796604	Cluster_3525	Pocillopora_meandrina_HIv1___Sc0000010	796194	796604	411	174	96	0.632183908045977	.	UCAAAAAGAUCUUUGUUGGAAAUGACAUU	10	9	113	7	17	22	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:797151-797759	Cluster_3526	Pocillopora_meandrina_HIv1___Sc0000010	797151	797759	609	346	124	0.9942196531791907	+	UCGGUACUCUGUUCAAUAAUAUUUCUC	64	6	334	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:801842-803261	Cluster_3527	Pocillopora_meandrina_HIv1___Sc0000010	801842	803261	1420	7931	1211	0.7788425167065943	.	UAUGAAAGAUCUUGAUGUGGUGCGUCA	512	127	7589	35	32	56	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:804480-805612	Cluster_3528	Pocillopora_meandrina_HIv1___Sc0000010	804480	805612	1133	8297	1533	0.8923707364107508	+	UGAAAGGUACUUUCCGAAUGUUAGCAGAC	641	539	7159	30	95	278	196	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:807657-808087	Cluster_3529	Pocillopora_meandrina_HIv1___Sc0000010	807657	808087	431	439	130	0.9271070615034168	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	112	13	406	2	2	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:808222-808628	Cluster_3530	Pocillopora_meandrina_HIv1___Sc0000010	808222	808628	407	251	149	0.7768924302788844	.	UCUACCACAUCUUUAGCAUCUGAUUUAA	17	11	213	2	1	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:820776-821202	Cluster_3531	Pocillopora_meandrina_HIv1___Sc0000010	820776	821202	427	161	58	0.8819875776397516	+	UGAGUACGGGCACUUAAGAGUUUGAUG	22	10	140	0	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:838175-839002	Cluster_3532	Pocillopora_meandrina_HIv1___Sc0000010	838175	839002	828	433	132	0.9699769053117783	+	UAGGACAACUGAGAAUCCACGUAGACUC	91	1	423	0	8	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:842931-843354	Cluster_3533	Pocillopora_meandrina_HIv1___Sc0000010	842931	843354	424	225	132	0.48444444444444446	.	UCUUUUACCAUAUCUAAAACUCCACAUU	16	4	197	2	4	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:843477-844196	Cluster_3534	Pocillopora_meandrina_HIv1___Sc0000010	843477	844196	720	516	245	0.7558139534883721	.	UCUUUUGGGUCGUAACUUGAAACAUUCAUA	51	11	475	3	4	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:874558-875360	Cluster_3535	Pocillopora_meandrina_HIv1___Sc0000010	874558	875360	803	16371	534	0.9040376275120641	+	UGCUUCAUUUCCCUGACUGUAGUCAGU	3198	62	14618	46	16	54	1575	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:897691-898120	Cluster_3536	Pocillopora_meandrina_HIv1___Sc0000010	897691	898120	430	1517	131	0.998022412656559	+	UCUUUCGGUCACGUGGGCUUCAAACGCGU	537	4	1502	2	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:919498-919932	Cluster_3537	Pocillopora_meandrina_HIv1___Sc0000010	919498	919932	435	815	175	0.9705521472392638	+	UAUGACUUAGCUAAUUCCGAUACAUGA	86	2	788	3	2	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:920394-920916	Cluster_3538	Pocillopora_meandrina_HIv1___Sc0000010	920394	920916	523	559	163	0.8801431127012522	+	UCGAACUAACAAUAACCUCCUGCGAUAAAUU	104	38	472	15	1	10	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:922617-923034	Cluster_3539	Pocillopora_meandrina_HIv1___Sc0000010	922617	923034	418	408	56	0.02696078431372549	-	AGAUUGAGAGCUCUUU	88	398	9	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:928313-929769	Cluster_3540	Pocillopora_meandrina_HIv1___Sc0000010	928313	929769	1457	1473	633	0.9368635437881874	+	UGAACUCUAUCUUUGAAGAACUCGCACUUCU	54	8	1389	4	7	17	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:930214-931412	Cluster_3541	Pocillopora_meandrina_HIv1___Sc0000010	930214	931412	1199	1270	513	0.925984251968504	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	106	11	1177	7	5	19	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1017837-1018253	Cluster_3542	Pocillopora_meandrina_HIv1___Sc0000010	1017837	1018253	417	332	49	0.0030120481927710845	-	UUCUUAGUUGGUGGAGC	57	332	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1155444-1155861	Cluster_3543	Pocillopora_meandrina_HIv1___Sc0000010	1155444	1155861	418	3028	33	0.0	-	CGGCAUGCAAAAAAA	1035	3026	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1170327-1170748	Cluster_3544	Pocillopora_meandrina_HIv1___Sc0000010	1170327	1170748	422	309	143	0.9902912621359223	+	UAUGAAAUACAUCGGUGGACU	29	121	55	66	37	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1221542-1221956	Cluster_3545	Pocillopora_meandrina_HIv1___Sc0000010	1221542	1221956	415	92	8	0.9891304347826086	+	CCCUUUCCGAGGUCGA	64	92	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1222391-1222817	Cluster_3546	Pocillopora_meandrina_HIv1___Sc0000010	1222391	1222817	427	1058	107	0.0	-	GGGGGCAUAGCUCAGUGGUAGAGCAUU	521	49	851	39	36	16	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1306165-1306587	Cluster_3547	Pocillopora_meandrina_HIv1___Sc0000010	1306165	1306587	423	624	112	0.046474358974358976	-	CUCGCCUCUACUUGACCUCAUUA	153	238	3	148	77	158	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1313084-1314286	Cluster_3548	Pocillopora_meandrina_HIv1___Sc0000010	1313084	1314286	1203	2438	380	0.22846595570139458	.	UAGAGAACGUUGCUGACACUGAAUGGUC	528	17	2383	1	10	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1335014-1335439	Cluster_3549	Pocillopora_meandrina_HIv1___Sc0000010	1335014	1335439	426	107	45	0.9719626168224299	+	CCUCGAGACUGUAAGGAGAGAGACGU	19	19	77	1	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1837453-1838066	Cluster_3550	Pocillopora_meandrina_HIv1___Sc0000010	1837453	1838066	614	271	137	0.0	-	UGCUCAUAUCUAAUAGGACAACUGCCGUU	38	1	262	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1847194-1847623	Cluster_3551	Pocillopora_meandrina_HIv1___Sc0000010	1847194	1847623	430	287	105	0.9198606271777003	+	UGUUUCAACUCUUGAAUGAUUCUUGCUU	38	0	276	1	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2001081-2001495	Cluster_3552	Pocillopora_meandrina_HIv1___Sc0000010	2001081	2001495	415	127	22	0.07086614173228346	-	UCCCCGUCCGGGCCUCC	27	127	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2209255-2209659	Cluster_3553	Pocillopora_meandrina_HIv1___Sc0000010	2209255	2209659	405	147	103	0.40816326530612246	.	UGCGUCUGUUCAGUAAUGGA	13	91	16	21	11	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2415327-2415757	Cluster_3554	Pocillopora_meandrina_HIv1___Sc0000010	2415327	2415757	431	247	39	0.979757085020243	+	AGAGACUCGUCCAAAAUUACUCCUAAGUAUU	75	7	235	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2417993-2418410	Cluster_3555	Pocillopora_meandrina_HIv1___Sc0000010	2417993	2418410	418	146	74	0.9657534246575342	+	UGAUCUUCUGUUUUAUAUUUGAGCCAGC	22	4	138	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2427917-2428328	Cluster_3556	Pocillopora_meandrina_HIv1___Sc0000010	2427917	2428328	412	183	112	0.8469945355191257	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	15	1	163	1	2	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2428422-2428838	Cluster_3557	Pocillopora_meandrina_HIv1___Sc0000010	2428422	2428838	417	288	188	0.9305555555555556	+	UCAGACACGUGGAUACUUGCGAUGAAGU	17	2	270	0	0	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2429196-2429611	Cluster_3558	Pocillopora_meandrina_HIv1___Sc0000010	2429196	2429611	416	237	117	0.890295358649789	+	UCUACGUCUAUCAACCAGGAAUGAAACUCGU	24	4	214	1	1	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2430352-2430780	Cluster_3559	Pocillopora_meandrina_HIv1___Sc0000010	2430352	2430780	429	199	58	0.6884422110552764	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	39	0	156	1	3	0	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2441809-2442565	Cluster_3560	Pocillopora_meandrina_HIv1___Sc0000010	2441809	2442565	757	1802	298	0.902330743618202	+	CUCGGGCUGAGACUGGG	258	279	1428	4	43	13	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2449129-2450126	Cluster_3561	Pocillopora_meandrina_HIv1___Sc0000010	2449129	2450126	998	2283	462	0.9321068769163382	+	UGUUUGAUCCAAUUCAGGAUACUUUGGCG	287	21	2161	2	4	48	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2450219-2451571	Cluster_3562	Pocillopora_meandrina_HIv1___Sc0000010	2450219	2451571	1353	2806	666	0.9818246614397719	+	UCCAUGGCUCUUGUGUGCUUGUUGCAUA	396	48	2683	5	13	8	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2455281-2455708	Cluster_3563	Pocillopora_meandrina_HIv1___Sc0000010	2455281	2455708	428	293	108	0.9385665529010239	+	UGCAAGCUUCUCAUUAUUCGGCAGGACU	37	6	274	2	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2455924-2456773	Cluster_3564	Pocillopora_meandrina_HIv1___Sc0000010	2455924	2456773	850	2557	350	0.9984356667970278	+	UACUUCCUGUCACUGGACUGAUGAUGCC	640	24	2504	6	5	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2456983-2458012	Cluster_3565	Pocillopora_meandrina_HIv1___Sc0000010	2456983	2458012	1030	2315	437	0.9382289416846652	+	UCAGCAAACUGUUGGAAAUGCAUGCCAUC	635	58	2167	2	35	25	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2461300-2461706	Cluster_3566	Pocillopora_meandrina_HIv1___Sc0000010	2461300	2461706	407	219	127	0.9452054794520548	+	UAGGAAAUGGCGUCCAGUAAGUCUUAGA	17	7	196	3	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2461732-2462159	Cluster_3567	Pocillopora_meandrina_HIv1___Sc0000010	2461732	2462159	428	327	166	0.8409785932721713	+	UAUUCUCAACAGUACUCAAAAAGGUAACACG	27	7	286	4	5	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2462681-2463360	Cluster_3568	Pocillopora_meandrina_HIv1___Sc0000010	2462681	2463360	680	277	165	0.8953068592057761	+	UGACAUGUCGAAACCCGUAAUCUAAAGU	21	4	259	2	1	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2463754-2464730	Cluster_3569	Pocillopora_meandrina_HIv1___Sc0000010	2463754	2464730	977	1154	258	0.9306759098786829	+	UAACUCCGAUCCGAUGACCUAGAAAGUC	150	10	1099	4	5	6	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2464979-2465572	Cluster_3570	Pocillopora_meandrina_HIv1___Sc0000010	2464979	2465572	594	1074	365	0.7439478584729982	.	UAUAUAUCCUCUGUGAUUGUCUGAUCAC	58	37	893	47	27	19	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2465838-2466345	Cluster_3571	Pocillopora_meandrina_HIv1___Sc0000010	2465838	2466345	508	730	312	0.7520547945205479	.	UCUGAUUGCAUAUACCUGUGAAACUUGU	102	15	641	9	7	21	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2466427-2467881	Cluster_3572	Pocillopora_meandrina_HIv1___Sc0000010	2466427	2467881	1455	5621	1140	0.9519658423768013	+	UAGGAGAUGUGUCUUUCCAGGCUCGAAA	844	43	5316	15	34	46	167	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2469759-2470188	Cluster_3573	Pocillopora_meandrina_HIv1___Sc0000010	2469759	2470188	430	106	22	1.0	+	UGAAAACUGCACUCAACCAAAACUUUGAGC	61	2	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2478733-2479146	Cluster_3574	Pocillopora_meandrina_HIv1___Sc0000010	2478733	2479146	414	128	66	0.421875	.	UACUUGUCUAUCCUGGACCACCGGAACA	37	5	117	0	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2479632-2480804	Cluster_3575	Pocillopora_meandrina_HIv1___Sc0000010	2479632	2480804	1173	3689	798	0.9585253456221198	+	UGAAUACUUAAGGGUCGGUCAGGCUGAUA	632	28	3497	28	22	51	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2480915-2481760	Cluster_3576	Pocillopora_meandrina_HIv1___Sc0000010	2480915	2481760	846	8334	806	0.9893208543316535	+	UGAGAUAUGUAUUCUUCUUCGAGGCAGA	2811	27	8138	42	11	32	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2482829-2483305	Cluster_3577	Pocillopora_meandrina_HIv1___Sc0000010	2482829	2483305	477	324	142	0.9320987654320988	+	UGAUUUAGAAAUAAGAAAUGAUUCU	27	1	315	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2491003-2491417	Cluster_3578	Pocillopora_meandrina_HIv1___Sc0000010	2491003	2491417	415	88	15	1.0	+	UCAGACGUGGCGACCC	68	73	15	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2497239-2498199	Cluster_3579	Pocillopora_meandrina_HIv1___Sc0000010	2497239	2498199	961	3114	661	0.9637122671804753	+	UGAUGAUCGUUGACGGGAGAAAACUCACA	191	42	2978	12	15	31	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2498258-2499133	Cluster_3580	Pocillopora_meandrina_HIv1___Sc0000010	2498258	2499133	876	2831	667	0.9537265983751325	+	UGAACAUGUAGGAAACUGACUUUUGGUC	452	20	2678	8	15	27	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2499190-2501060	Cluster_3581	Pocillopora_meandrina_HIv1___Sc0000010	2499190	2501060	1871	5074	1571	0.8878596767836027	+	UAUUCGUCUAGAGUUUCACCAACCUGU	367	92	4735	32	21	72	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2506868-2507294	Cluster_3582	Pocillopora_meandrina_HIv1___Sc0000010	2506868	2507294	427	167	88	0.9461077844311377	+	UCGGUUAUCAUUACUAUUUGCAUCUUCAUC	23	9	153	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2514789-2515216	Cluster_3583	Pocillopora_meandrina_HIv1___Sc0000010	2514789	2515216	428	114	15	0.9912280701754386	+	UAACCCGAGAACUGACACGUGAGUAGUC	80	0	107	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2519340-2519767	Cluster_3584	Pocillopora_meandrina_HIv1___Sc0000010	2519340	2519767	428	116	14	0.9913793103448276	+	UAACCCGAGAACUGACACGUGAGUAGUC	79	0	101	1	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2522763-2523192	Cluster_3585	Pocillopora_meandrina_HIv1___Sc0000010	2522763	2523192	430	174	29	1.0	+	UGACUUGCACAGCUUCUUGAAAUAAACAGG	48	2	163	0	0	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2536734-2537162	Cluster_3586	Pocillopora_meandrina_HIv1___Sc0000010	2536734	2537162	429	131	27	0.9847328244274809	+	UAUUCCAACCGAUCUACUAAUUUUGUGAC	61	0	131	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2537629-2538055	Cluster_3587	Pocillopora_meandrina_HIv1___Sc0000010	2537629	2538055	427	110	24	0.9818181818181818	+	AACGUGCUACUGAUUCUGGUGAAGACAUUC	37	2	98	0	10	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2564839-2565268	Cluster_3588	Pocillopora_meandrina_HIv1___Sc0000010	2564839	2565268	430	148	46	0.9932432432432432	+	UGAAUAGCAUAACUGAUGAACUACGGG	21	0	147	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2565805-2566238	Cluster_3589	Pocillopora_meandrina_HIv1___Sc0000010	2565805	2566238	434	461	201	0.8329718004338394	+	UAUGACGUUCCAGAAUCUUUGACAAAA	38	4	439	2	5	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2566408-2567186	Cluster_3590	Pocillopora_meandrina_HIv1___Sc0000010	2566408	2567186	779	890	338	0.9404494382022472	+	UCCGUGACACAACGACUUUGCCUUGCUU	116	10	856	4	3	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2571020-2571648	Cluster_3591	Pocillopora_meandrina_HIv1___Sc0000010	2571020	2571648	629	1872	218	0.9957264957264957	+	UGAUUGGUGCAUUUCGAUCCUUGCUGU	702	9	1850	1	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2602294-2602714	Cluster_3592	Pocillopora_meandrina_HIv1___Sc0000010	2602294	2602714	421	87	20	0.9425287356321839	+	AGCAUGACGAAGGUUAGAGAUCGAC	36	2	50	2	1	5	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3008210-3008649	Cluster_3593	Pocillopora_meandrina_HIv1___Sc0000010	3008210	3008649	440	865	161	0.03468208092485549	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	219	3	845	0	1	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3150266-3150691	Cluster_3594	Pocillopora_meandrina_HIv1___Sc0000010	3150266	3150691	426	244	131	0.15163934426229508	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	27	3	222	2	0	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3151923-3152623	Cluster_3595	Pocillopora_meandrina_HIv1___Sc0000010	3151923	3152623	701	254	136	0.09055118110236221	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	22	9	236	0	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3204207-3204630	Cluster_3596	Pocillopora_meandrina_HIv1___Sc0000010	3204207	3204630	424	180	79	0.03333333333333333	-	CUAGUACAAACAACGAUCGAGUGGCCAUU	24	5	142	9	5	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3204725-3205723	Cluster_3597	Pocillopora_meandrina_HIv1___Sc0000010	3204725	3205723	999	1428	272	0.1638655462184874	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	231	23	1365	6	5	20	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3227583-3228009	Cluster_3598	Pocillopora_meandrina_HIv1___Sc0000010	3227583	3228009	427	193	76	0.16062176165803108	-	UCGUUUAGAUCAGAGAUCACCUCAACU	18	0	174	4	1	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3259369-3259782	Cluster_3599	Pocillopora_meandrina_HIv1___Sc0000010	3259369	3259782	414	132	40	1.0	+	GACGAAUCGUGCGGCG	27	107	18	2	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3263504-3263915	Cluster_3600	Pocillopora_meandrina_HIv1___Sc0000010	3263504	3263915	412	168	109	0.011904761904761904	-	AGAAAGCUCUGAGGAACACU	10	56	54	10	21	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3368202-3369096	Cluster_3601	Pocillopora_meandrina_HIv1___Sc0000010	3368202	3369096	895	448	142	0.22098214285714285	.	UUUCAAACUAAGGAAGGAGAAAGGGAUA	87	16	334	5	5	10	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3369865-3370294	Cluster_3602	Pocillopora_meandrina_HIv1___Sc0000010	3369865	3370294	430	677	75	0.0014771048744460858	-	UGAAGAUGGAAUCAAGAAAUGCAAAAC	331	16	596	4	35	14	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3374263-3374687	Cluster_3603	Pocillopora_meandrina_HIv1___Sc0000010	3374263	3374687	425	189	79	0.0	-	GAUUCUGGUAGCGUUUUUAAGUGCG	23	10	151	1	4	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3388834-3389259	Cluster_3604	Pocillopora_meandrina_HIv1___Sc0000010	3388834	3389259	426	327	168	0.3394495412844037	.	UUAAAAAGACGAGCUCGACA	21	203	0	108	13	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3398303-3399259	Cluster_3605	Pocillopora_meandrina_HIv1___Sc0000010	3398303	3399259	957	934	213	0.043897216274089934	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	219	17	890	1	7	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3411199-3411966	Cluster_3606	Pocillopora_meandrina_HIv1___Sc0000010	3411199	3411966	768	720	128	0.9958333333333333	+	UGCAAAAUCGACUCCGAUAACCUCAAAUGG	147	3	714	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3413718-3414144	Cluster_3607	Pocillopora_meandrina_HIv1___Sc0000010	3413718	3414144	427	236	112	0.9703389830508474	+	UCAUCUACAGUCGCAGUUUCAACUUCUAGU	21	1	227	0	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3415285-3416188	Cluster_3608	Pocillopora_meandrina_HIv1___Sc0000010	3415285	3416188	904	1024	314	0.9384765625	+	UUGGCGUAGUUUCGUUUGCGUGAAAUGUU	128	8	980	5	7	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3416832-3417253	Cluster_3609	Pocillopora_meandrina_HIv1___Sc0000010	3416832	3417253	422	74	30	0.0	-	AUUGAAAACGAUCUCGGGCGCCCAGAACA	14	0	71	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3540996-3541397	Cluster_3610	Pocillopora_meandrina_HIv1___Sc0000010	3540996	3541397	402	260	186	0.015384615384615385	-	GGAACGGCGUGAACU	7	116	67	27	11	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3564125-3564539	Cluster_3611	Pocillopora_meandrina_HIv1___Sc0000010	3564125	3564539	415	226	4	0.0	-	AGGAGAACGUAGGGU	223	225	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3644374-3644993	Cluster_3612	Pocillopora_meandrina_HIv1___Sc0000010	3644374	3644993	620	323	135	0.034055727554179564	-	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	47	1	317	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3658432-3658849	Cluster_3613	Pocillopora_meandrina_HIv1___Sc0000010	3658432	3658849	418	118	26	0.8898305084745762	+	CUUUCUGGAGUUAAGGUU	68	109	6	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3676348-3676967	Cluster_3614	Pocillopora_meandrina_HIv1___Sc0000010	3676348	3676967	620	353	162	0.0339943342776204	-	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	53	1	344	3	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3712931-3713345	Cluster_3615	Pocillopora_meandrina_HIv1___Sc0000010	3712931	3713345	415	164	73	0.47560975609756095	.	CGCUGGGGCUCUGCC	68	113	26	8	3	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3747752-3748577	Cluster_3616	Pocillopora_meandrina_HIv1___Sc0000010	3747752	3748577	826	2580	662	0.8523255813953489	+	UUAUCAACAGUACGGUUUGACUUGAAUC	267	38	2425	12	28	18	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3940413-3940841	Cluster_3617	Pocillopora_meandrina_HIv1___Sc0000010	3940413	3940841	429	142	33	0.9859154929577465	+	UGAGUCAAGAUUUGCUUCCACCUGAAGGC	55	3	134	2	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4074115-4074529	Cluster_3618	Pocillopora_meandrina_HIv1___Sc0000010	4074115	4074529	415	258	12	0.003875968992248062	-	CUUUCCGGGGUCGCG	214	258	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4088545-4088984	Cluster_3619	Pocillopora_meandrina_HIv1___Sc0000010	4088545	4088984	440	2392	208	0.987876254180602	+	UGCUGAAAAUCUGGACUUCUCGUAGAGC	668	12	2319	0	0	47	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4179325-4179737	Cluster_3620	Pocillopora_meandrina_HIv1___Sc0000010	4179325	4179737	413	80	29	0.0	-	AAGGAUUGGCUCUGAGG	11	77	0	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4250289-4250716	Cluster_3621	Pocillopora_meandrina_HIv1___Sc0000010	4250289	4250716	428	92	28	0.9347826086956522	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	32	0	87	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4358728-4359697	Cluster_3622	Pocillopora_meandrina_HIv1___Sc0000010	4358728	4359697	970	840	334	0.8047619047619048	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	114	24	756	4	4	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4480456-4481231	Cluster_3623	Pocillopora_meandrina_HIv1___Sc0000010	4480456	4481231	776	1228	252	0.3257328990228013	.	UCACCAUGAAAAGACUCUGGGCCAAAG	118	12	1142	1	4	20	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4481708-4482137	Cluster_3624	Pocillopora_meandrina_HIv1___Sc0000010	4481708	4482137	430	245	41	0.2938775510204082	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	83	5	229	3	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4482895-4483325	Cluster_3625	Pocillopora_meandrina_HIv1___Sc0000010	4482895	4483325	431	1486	154	0.968371467025572	+	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	379	5	1465	5	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4483688-4484591	Cluster_3626	Pocillopora_meandrina_HIv1___Sc0000010	4483688	4484591	904	1093	260	0.6193961573650503	.	UAAGGAAAGUCUUUUCUGGGGUCUCCAAA	335	20	1024	5	7	10	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4573776-4575017	Cluster_3627	Pocillopora_meandrina_HIv1___Sc0000010	4573776	4575017	1242	5822	915	0.7952593610443147	.	UACUUGUCGAAGUCCUGGCCCUCUAGCC	610	50	4828	22	77	430	415	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5041260-5041673	Cluster_3628	Pocillopora_meandrina_HIv1___Sc0000010	5041260	5041673	414	74	29	0.013513513513513514	-	UGUAGAACUGUCCGCCCAG	13	39	11	18	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5046153-5046580	Cluster_3629	Pocillopora_meandrina_HIv1___Sc0000010	5046153	5046580	428	467	102	0.9443254817987152	+	UCGACGUCGAUAUCAACAUUCUUAAUGU	226	3	454	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5080307-5080730	Cluster_3630	Pocillopora_meandrina_HIv1___Sc0000010	5080307	5080730	424	133	70	0.9924812030075187	+	UGCACUACACAGCCUCAGACAUUG	12	15	78	4	5	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5112513-5112980	Cluster_3631	Pocillopora_meandrina_HIv1___Sc0000010	5112513	5112980	468	343	246	0.9970845481049563	+	GACGAAAGAAAGUUGUGGACGCA	6	134	101	21	27	35	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5121116-5121526	Cluster_3632	Pocillopora_meandrina_HIv1___Sc0000010	5121116	5121526	411	263	191	1.0	+	UGAUAACAUAAUCUGCGGCAUCACCUCUGU	11	85	116	15	13	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5169129-5169549	Cluster_3633	Pocillopora_meandrina_HIv1___Sc0000010	5169129	5169549	421	83	25	1.0	+	UGCCAGACCUCUUACAAACCUCU	26	4	2	8	16	50	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5177648-5178064	Cluster_3634	Pocillopora_meandrina_HIv1___Sc0000010	5177648	5178064	417	133	18	1.0	+	UAAGGAGUGUGUAACAA	40	133	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5184027-5184454	Cluster_3635	Pocillopora_meandrina_HIv1___Sc0000010	5184027	5184454	428	174	68	0.028735632183908046	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	33	3	162	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5194392-5194808	Cluster_3636	Pocillopora_meandrina_HIv1___Sc0000010	5194392	5194808	417	834	28	0.011990407673860911	-	UGGCCUGAAAAAAAAA	395	823	1	1	6	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5215689-5216107	Cluster_3637	Pocillopora_meandrina_HIv1___Sc0000010	5215689	5216107	419	228	152	0.0	-	ACGGAAAAGUCUGACACUGA	12	101	69	14	13	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5218833-5219247	Cluster_3638	Pocillopora_meandrina_HIv1___Sc0000010	5218833	5219247	415	221	166	0.00904977375565611	-	GGUGAUUGCUGACGGCUGUGCU	6	80	66	21	24	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5386985-5387412	Cluster_3639	Pocillopora_meandrina_HIv1___Sc0000010	5386985	5387412	428	88	19	0.045454545454545456	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	37	1	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5454690-5455264	Cluster_3640	Pocillopora_meandrina_HIv1___Sc0000010	5454690	5455264	575	3389	413	0.4254942460902921	.	UGUAUGGCAAAGUUCUAAUAUUAAAAAAUU	657	28	2162	123	27	297	752	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5456216-5456936	Cluster_3641	Pocillopora_meandrina_HIv1___Sc0000010	5456216	5456936	721	480	173	0.73125	.	UGAUGCAAUCUGUUUCUGCAUGAGGGC	54	5	412	7	5	17	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5463919-5464391	Cluster_3642	Pocillopora_meandrina_HIv1___Sc0000010	5463919	5464391	473	251	121	0.6693227091633466	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	23	11	219	1	2	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5464715-5465144	Cluster_3643	Pocillopora_meandrina_HIv1___Sc0000010	5464715	5465144	430	117	39	0.9487179487179487	+	AGUUGACAUAUUGACUGGUACAAACAAGGA	63	6	105	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5487259-5487684	Cluster_3644	Pocillopora_meandrina_HIv1___Sc0000010	5487259	5487684	426	262	31	0.9618320610687023	+	GUCCGUCCUAAAGGAAACCCCUGCAA	109	9	243	2	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5840138-5840633	Cluster_3645	Pocillopora_meandrina_HIv1___Sc0000010	5840138	5840633	496	599	75	0.0	-	CGUUACUGUUUGUCUGUAAGGGACGUGAU	84	0	597	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5846252-5846678	Cluster_3646	Pocillopora_meandrina_HIv1___Sc0000010	5846252	5846678	427	193	38	0.08808290155440414	-	AGGGACUGAAACAUCGACUGAAGACG	55	0	162	6	0	8	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5905579-5906074	Cluster_3647	Pocillopora_meandrina_HIv1___Sc0000010	5905579	5906074	496	509	81	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	77	0	507	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5952667-5953092	Cluster_3648	Pocillopora_meandrina_HIv1___Sc0000010	5952667	5953092	426	149	46	0.040268456375838924	-	UCUUGCUUUGGGCUAAUGAUAAGACAU	33	3	101	17	5	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6015149-6015576	Cluster_3649	Pocillopora_meandrina_HIv1___Sc0000010	6015149	6015576	428	182	49	0.9505494505494505	+	UUAGAGAAUGCAAACCCAAUUUGGACGG	47	1	171	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6072176-6072604	Cluster_3650	Pocillopora_meandrina_HIv1___Sc0000010	6072176	6072604	429	367	51	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUGU	72	0	365	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6130485-6130913	Cluster_3651	Pocillopora_meandrina_HIv1___Sc0000010	6130485	6130913	429	347	45	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	76	0	345	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6186986-6187481	Cluster_3652	Pocillopora_meandrina_HIv1___Sc0000010	6186986	6187481	496	510	76	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	80	0	507	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6239131-6239626	Cluster_3653	Pocillopora_meandrina_HIv1___Sc0000010	6239131	6239626	496	613	67	0.0	-	CGUUACUGUUUGUCUGUAAGGGACGUGAU	80	0	611	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6359214-6359709	Cluster_3654	Pocillopora_meandrina_HIv1___Sc0000010	6359214	6359709	496	389	72	0.0	-	UCUUGCUUUGGGCUAAUGUUAAGACGUGU	58	4	377	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6433270-6433713	Cluster_3655	Pocillopora_meandrina_HIv1___Sc0000010	6433270	6433713	444	539	308	0.1261595547309833	-	UAAUGCUUAGUAAUGUCGACACACGAACUA	27	13	491	4	11	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6434403-6434829	Cluster_3656	Pocillopora_meandrina_HIv1___Sc0000010	6434403	6434829	427	243	125	0.18930041152263374	-	UGCGUACUUUGUUUGGCUUCACUAUGGC	31	3	212	2	3	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6435312-6435744	Cluster_3657	Pocillopora_meandrina_HIv1___Sc0000010	6435312	6435744	433	364	121	0.013736263736263736	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	49	2	354	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6435832-6436243	Cluster_3658	Pocillopora_meandrina_HIv1___Sc0000010	6435832	6436243	412	149	69	0.03355704697986577	-	UAUGUGAUCGGUGAAUUUGCUUCAACA	22	0	142	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6436834-6437251	Cluster_3659	Pocillopora_meandrina_HIv1___Sc0000010	6436834	6437251	418	114	64	0.05263157894736842	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	12	1	109	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6468262-6468688	Cluster_3660	Pocillopora_meandrina_HIv1___Sc0000010	6468262	6468688	427	212	115	0.1509433962264151	-	AGUUGACAUAUGGACUGGUACAAACAAGG	11	14	137	13	11	18	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6504286-6504781	Cluster_3661	Pocillopora_meandrina_HIv1___Sc0000010	6504286	6504781	496	495	70	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	83	0	490	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6531965-6533590	Cluster_3662	Pocillopora_meandrina_HIv1___Sc0000010	6531965	6533590	1626	4367	1068	0.7412411266315548	.	UGUGAAUUUUUGGAUCAUUGGUUGUGUU	141	51	3837	69	44	127	239	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6564274-6564702	Cluster_3663	Pocillopora_meandrina_HIv1___Sc0000010	6564274	6564702	429	338	53	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	65	1	336	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6635003-6635431	Cluster_3664	Pocillopora_meandrina_HIv1___Sc0000010	6635003	6635431	429	420	63	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	76	2	418	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6696554-6697112	Cluster_3665	Pocillopora_meandrina_HIv1___Sc0000010	6696554	6697112	559	682	121	0.9809384164222874	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	178	3	674	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6735764-6736193	Cluster_3666	Pocillopora_meandrina_HIv1___Sc0000010	6735764	6736193	430	229	57	0.056768558951965066	-	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	53	1	220	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6740567-6740994	Cluster_3667	Pocillopora_meandrina_HIv1___Sc0000010	6740567	6740994	428	160	57	0.0625	-	ACAAGCGAUAUGUGGACCUUGAUCUGCGA	23	1	155	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6741198-6741626	Cluster_3668	Pocillopora_meandrina_HIv1___Sc0000010	6741198	6741626	429	219	66	0.0228310502283105	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	79	1	202	0	0	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6796012-6796439	Cluster_3669	Pocillopora_meandrina_HIv1___Sc0000010	6796012	6796439	428	276	31	0.9927536231884058	+	AGUGACUGAAAAAAAAAAAAAAAAA	38	16	195	8	14	21	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6844842-6845267	Cluster_3670	Pocillopora_meandrina_HIv1___Sc0000010	6844842	6845267	426	109	44	0.981651376146789	+	UGUGUAGAUAUGUCUUUUGGACAGGA	30	1	106	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6995127-6995546	Cluster_3671	Pocillopora_meandrina_HIv1___Sc0000010	6995127	6995546	420	1994	100	0.0005015045135406219	-	GUAGUCGUGGCCGAGUGG	682	1967	8	5	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7063587-7064016	Cluster_3672	Pocillopora_meandrina_HIv1___Sc0000010	7063587	7064016	430	240	79	0.0375	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGC	22	1	227	1	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7067135-7067630	Cluster_3673	Pocillopora_meandrina_HIv1___Sc0000010	7067135	7067630	496	460	78	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	59	3	453	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7121699-7122127	Cluster_3674	Pocillopora_meandrina_HIv1___Sc0000010	7121699	7122127	429	365	62	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	67	0	362	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7141349-7141749	Cluster_3675	Pocillopora_meandrina_HIv1___Sc0000010	7141349	7141749	401	188	118	0.0797872340425532	-	UGGAAAUACUUAAAGGAGAUAAGACGUU	11	3	170	3	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7142356-7142786	Cluster_3676	Pocillopora_meandrina_HIv1___Sc0000010	7142356	7142786	431	451	134	0.07538802660753881	-	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	101	10	414	2	0	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7181896-7182326	Cluster_3677	Pocillopora_meandrina_HIv1___Sc0000010	7181896	7182326	431	999	132	0.02902902902902903	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGU	349	5	974	3	10	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7188769-7189197	Cluster_3678	Pocillopora_meandrina_HIv1___Sc0000010	7188769	7189197	429	324	70	0.037037037037037035	-	UAGGACAACUGAGAAUCCACGUAGACUC	107	1	312	0	9	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7190894-7191322	Cluster_3679	Pocillopora_meandrina_HIv1___Sc0000010	7190894	7191322	429	402	53	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	83	0	401	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7239251-7239778	Cluster_3680	Pocillopora_meandrina_HIv1___Sc0000010	7239251	7239778	528	820	214	0.09268292682926829	-	UGAUAUAAAUGACAAAAAGUAAAGGGC	214	18	739	5	8	28	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7239839-7240267	Cluster_3681	Pocillopora_meandrina_HIv1___Sc0000010	7239839	7240267	429	140	47	0.014285714285714285	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	16	2	137	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7258053-7258481	Cluster_3682	Pocillopora_meandrina_HIv1___Sc0000010	7258053	7258481	429	391	45	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUGU	76	1	390	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7364532-7364960	Cluster_3683	Pocillopora_meandrina_HIv1___Sc0000010	7364532	7364960	429	351	50	0.9886039886039886	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	78	1	347	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7435837-7436265	Cluster_3684	Pocillopora_meandrina_HIv1___Sc0000010	7435837	7436265	429	405	57	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUGU	71	1	404	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7460500-7462048	Cluster_3685	Pocillopora_meandrina_HIv1___Sc0000010	7460500	7462048	1549	2058	737	0.9548104956268222	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	109	23	1907	7	12	76	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7463684-7464723	Cluster_3686	Pocillopora_meandrina_HIv1___Sc0000010	7463684	7464723	1040	3695	758	0.9837618403247632	+	UCUGUCUGUAUUGUUUUGGACCACGAC	789	41	3570	17	8	30	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7464863-7465855	Cluster_3687	Pocillopora_meandrina_HIv1___Sc0000010	7464863	7465855	993	1141	475	0.9281332164767747	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	88	16	1063	7	3	9	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7465975-7466464	Cluster_3688	Pocillopora_meandrina_HIv1___Sc0000010	7465975	7466464	490	517	288	0.7969052224371374	.	GGAAGAAUUAGAUAAUGAGAAGCU	15	5	461	0	5	6	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7500043-7500465	Cluster_3689	Pocillopora_meandrina_HIv1___Sc0000010	7500043	7500465	423	197	49	0.649746192893401	.	CAAGUUGUAAAUUAUGGGUCGUG	64	3	101	1	5	64	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7535101-7535529	Cluster_3690	Pocillopora_meandrina_HIv1___Sc0000010	7535101	7535529	429	390	62	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	68	0	388	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7597297-7597855	Cluster_3691	Pocillopora_meandrina_HIv1___Sc0000010	7597297	7597855	559	519	95	0.025048169556840076	-	UGCAAACCCAAUUUGGACGGUUCAACUCC	168	1	510	0	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7604154-7604584	Cluster_3692	Pocillopora_meandrina_HIv1___Sc0000010	7604154	7604584	431	2918	126	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUGU	492	0	2917	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7665815-7666243	Cluster_3693	Pocillopora_meandrina_HIv1___Sc0000010	7665815	7666243	429	372	46	0.9973118279569892	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	78	1	371	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7738519-7738947	Cluster_3694	Pocillopora_meandrina_HIv1___Sc0000010	7738519	7738947	429	402	59	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	65	1	400	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7900802-7901231	Cluster_3695	Pocillopora_meandrina_HIv1___Sc0000010	7900802	7901231	430	968	107	0.9979338842975206	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUA	553	7	885	2	2	8	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7961220-7961634	Cluster_3696	Pocillopora_meandrina_HIv1___Sc0000010	7961220	7961634	415	94	17	0.9893617021276596	+	CCCUUAGAUGUUCUG	34	93	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8008738-8009160	Cluster_3697	Pocillopora_meandrina_HIv1___Sc0000010	8008738	8009160	423	1101	86	0.9654859218891917	+	UACUUAAAUGUUAUUGGUUUGU	364	6	39	5	581	445	25	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8010736-8011158	Cluster_3698	Pocillopora_meandrina_HIv1___Sc0000010	8010736	8011158	423	1674	98	0.9743130227001194	+	UACUUAAAUGUUAUUGGUUUGU	566	15	46	7	911	663	32	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8012916-8013008	Cluster_3699	Pocillopora_meandrina_HIv1___Sc0000010	8012916	8013008	93	26337	346	0.9900520180734328	+	UACUUCAAUGUUAUCGGUUUGU	7827	450	127	185	12765	11637	1173	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000010:8043324-8043739	Cluster_3700	Pocillopora_meandrina_HIv1___Sc0000010	8043324	8043739	416	104	13	0.019230769230769232	-	GUGUUUUUCGGUCUGU	91	98	4	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8076458-8077343	Cluster_3701	Pocillopora_meandrina_HIv1___Sc0000010	8076458	8077343	886	1489	330	0.31229012760241776	.	UUGUUACAAUGGAAUUCUCAUCUUCUAG	119	23	1408	2	2	25	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8149899-8150325	Cluster_3702	Pocillopora_meandrina_HIv1___Sc0000010	8149899	8150325	427	194	108	0.8762886597938144	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	23	1	186	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8262786-8263209	Cluster_3703	Pocillopora_meandrina_HIv1___Sc0000010	8262786	8263209	424	110	40	0.21818181818181817	.	UGCUUUGGACGAAAUUUCGAGGUUCACACU	47	10	81	14	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8395007-8395434	Cluster_3704	Pocillopora_meandrina_HIv1___Sc0000010	8395007	8395434	428	223	124	0.7488789237668162	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	10	1	201	0	2	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8396952-8397377	Cluster_3705	Pocillopora_meandrina_HIv1___Sc0000010	8396952	8397377	426	244	126	0.04918032786885246	-	UUAUUGACGAAUUUUCUGAGUACCUUGA	18	2	232	0	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8397444-8397884	Cluster_3706	Pocillopora_meandrina_HIv1___Sc0000010	8397444	8397884	441	401	196	0.22942643391521197	.	UGCUCGCUCUAUUUCAAACAAAUCUGCACU	24	9	338	3	5	18	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8565037-8565455	Cluster_3707	Pocillopora_meandrina_HIv1___Sc0000010	8565037	8565455	419	136	66	0.0	-	GCGUUGGUGGUAUAGUGGU	37	110	13	3	4	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8566458-8566931	Cluster_3708	Pocillopora_meandrina_HIv1___Sc0000010	8566458	8566931	474	660	148	0.0	-	GCGUUGGUGGUAUAGUGGU	198	552	72	14	10	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8583914-8584344	Cluster_3709	Pocillopora_meandrina_HIv1___Sc0000010	8583914	8584344	431	291	183	0.45017182130584193	.	UUAACGGCUGUGUAGGAUAGAAUCGUCAACC	21	126	90	58	10	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8672504-8672930	Cluster_3710	Pocillopora_meandrina_HIv1___Sc0000010	8672504	8672930	427	180	29	0.011111111111111112	-	AUGCAUUGCCGAUAUUUACUUUAUUUG	83	2	168	2	7	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8752674-8753159	Cluster_3711	Pocillopora_meandrina_HIv1___Sc0000010	8752674	8753159	486	810	170	0.11851851851851852	-	AAGUUUUCCAACGACUCGUUUCUCUGCG	247	6	752	0	1	14	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8886490-8887042	Cluster_3712	Pocillopora_meandrina_HIv1___Sc0000010	8886490	8887042	553	781	344	0.01792573623559539	-	UGGCUGAGCUUCGCGUGUUU	37	256	227	105	58	74	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8891665-8892085	Cluster_3713	Pocillopora_meandrina_HIv1___Sc0000010	8891665	8892085	421	269	122	0.6059479553903345	.	AUUGUGCACCGUGUACCCUCU	42	108	13	119	20	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8894994-8895408	Cluster_3714	Pocillopora_meandrina_HIv1___Sc0000010	8894994	8895408	415	96	4	1.0	+	CUUUCCGAGGUCGAG	92	96	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8902782-8903327	Cluster_3715	Pocillopora_meandrina_HIv1___Sc0000010	8902782	8903327	546	1343	526	0.029039463886820552	-	CGUACGCGCUCGUUGGCCCUC	94	450	194	383	94	131	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8921529-8922238	Cluster_3716	Pocillopora_meandrina_HIv1___Sc0000010	8921529	8922238	710	923	254	0.9750812567713976	+	UGUAAGACUGACAAAGGCUAAGGUGAACAGC	109	11	875	1	4	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9015035-9015513	Cluster_3717	Pocillopora_meandrina_HIv1___Sc0000010	9015035	9015513	479	11405	1061	0.9979833406400701	+	AUCUAAUGAUGACAGCCUCAGU	2190	3089	1907	918	3670	1468	353	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9079066-9079545	Cluster_3718	Pocillopora_meandrina_HIv1___Sc0000010	9079066	9079545	480	1893	469	0.9989434759640782	+	AGGGAAUGACGAUAACCUUGGAGC	123	559	717	145	149	108	215	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9257329-9257858	Cluster_3719	Pocillopora_meandrina_HIv1___Sc0000010	9257329	9257858	530	7591	1338	0.00026346989856408903	-	GAGGCUACCUCUGACC	592	4345	2119	263	333	237	294	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9271372-9271788	Cluster_3720	Pocillopora_meandrina_HIv1___Sc0000010	9271372	9271788	417	1069	20	1.0	+	UUUGUUCUAAGAUUUGC	464	1069	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9315058-9315482	Cluster_3721	Pocillopora_meandrina_HIv1___Sc0000010	9315058	9315482	425	705	108	1.0	+	UGCAAGCAUUAGUGGUGUGUCUCU	171	30	128	23	16	44	464	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9717806-9718228	Cluster_3722	Pocillopora_meandrina_HIv1___Sc0000010	9717806	9718228	423	165	57	0.0	-	GCGGUCUUUGAUUUACAAGUCU	21	25	55	0	45	13	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9759460-9759889	Cluster_3723	Pocillopora_meandrina_HIv1___Sc0000010	9759460	9759889	430	130	38	0.9923076923076923	+	ACUGAAGAAAAUUAUAGAAAGGCAACUGAG	43	6	123	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9776404-9776828	Cluster_3724	Pocillopora_meandrina_HIv1___Sc0000010	9776404	9776828	425	180	62	0.0	-	GUGGUCUUUGAUUUACAAGUCUGGU	50	15	101	4	15	23	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9834830-9835310	Cluster_3725	Pocillopora_meandrina_HIv1___Sc0000010	9834830	9835310	481	799	276	0.9987484355444305	+	CUGAUAAAAGUCAUCAAAACCCUGAGAA	91	117	543	21	40	25	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9838086-9838501	Cluster_3726	Pocillopora_meandrina_HIv1___Sc0000010	9838086	9838501	416	149	21	0.0	-	AUAGAAUGAUGAUGCA	102	145	1	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9847650-9848069	Cluster_3727	Pocillopora_meandrina_HIv1___Sc0000010	9847650	9848069	420	171	24	0.05263157894736842	-	UCUUGAUGUUUGAGCUGAGC	75	159	2	8	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9867206-9867625	Cluster_3728	Pocillopora_meandrina_HIv1___Sc0000010	9867206	9867625	420	74	22	1.0	+	CGCGGAAAGAGGAGAGAUUGCUUGUGCACC	22	2	71	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9938591-9939013	Cluster_3729	Pocillopora_meandrina_HIv1___Sc0000010	9938591	9939013	423	180	35	0.9944444444444445	+	UUAUAAUUUACAAACUCUUCUUA	86	5	23	10	28	110	4	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10103315-10103786	Cluster_3730	Pocillopora_meandrina_HIv1___Sc0000010	10103315	10103786	472	13884	661	0.9997839239412273	+	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	2990	3100	10350	46	262	66	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10172945-10173373	Cluster_3731	Pocillopora_meandrina_HIv1___Sc0000010	10172945	10173373	429	118	42	0.788135593220339	.	UCGAUUCCACCGAAAGAAAUAACCUGUGC	43	11	100	7	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10888007-10888892	Cluster_3732	Pocillopora_meandrina_HIv1___Sc0000010	10888007	10888892	886	1153	827	0.004336513443191674	-	CAUUCUGUGCGCUUU	7	356	491	70	83	80	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10889114-10889526	Cluster_3733	Pocillopora_meandrina_HIv1___Sc0000010	10889114	10889526	413	197	145	0.0	-	GAAGAUCAAGGAAACCAUGAAUACU	6	75	69	7	12	21	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11053919-11054459	Cluster_3734	Pocillopora_meandrina_HIv1___Sc0000010	11053919	11054459	541	994	307	0.0	-	GGUGCACUUGUGAAUGGAGCA	156	432	206	227	78	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11163945-11164388	Cluster_3735	Pocillopora_meandrina_HIv1___Sc0000010	11163945	11164388	444	382	129	0.002617801047120419	-	AUGGCUGAAUUUUACC	85	200	48	29	32	48	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11164832-11165249	Cluster_3736	Pocillopora_meandrina_HIv1___Sc0000010	11164832	11165249	418	231	117	0.0	-	UCAGCCUGAAAGAAAACU	48	162	49	4	5	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11196232-11196659	Cluster_3737	Pocillopora_meandrina_HIv1___Sc0000010	11196232	11196659	428	112	38	0.9910714285714286	+	UGACAGCUCAUCGAUCAGAAAACAAAGA	28	1	109	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11584486-11584903	Cluster_3738	Pocillopora_meandrina_HIv1___Sc0000010	11584486	11584903	418	1889	46	1.0	+	AGCUGUGACCCUCGGGC	883	1889	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:204592-205006	Cluster_3739	Pocillopora_meandrina_HIv1___Sc0000011	204592	205006	415	1648	8	0.9981796116504854	+	GCGACUGCUGCCGGC	1614	1648	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:263839-264256	Cluster_3740	Pocillopora_meandrina_HIv1___Sc0000011	263839	264256	418	1500	44	0.005333333333333333	-	CGCUACUUUGACCUCAUA	584	1493	6	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:350050-350469	Cluster_3741	Pocillopora_meandrina_HIv1___Sc0000011	350050	350469	420	105	23	0.05714285714285714	-	UAGUGCUGAGUACUCUGAGCU	45	35	2	57	8	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:716133-716553	Cluster_3742	Pocillopora_meandrina_HIv1___Sc0000011	716133	716553	421	246	163	0.0	-	GGUGACUAAGACUGAGCAAGC	10	69	88	33	17	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:728488-728888	Cluster_3743	Pocillopora_meandrina_HIv1___Sc0000011	728488	728888	401	194	117	0.9587628865979382	+	UAACGAACUAUGACAGCAAGGGCCUCAC	16	4	179	1	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:736998-737412	Cluster_3744	Pocillopora_meandrina_HIv1___Sc0000011	736998	737412	415	95	8	0.010526315789473684	-	GAUGAGGCUCAUAAC	73	95	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:947640-948056	Cluster_3745	Pocillopora_meandrina_HIv1___Sc0000011	947640	948056	417	566	17	0.991166077738516	+	GCGGAUGUGGCGGAAU	311	565	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1136360-1136777	Cluster_3746	Pocillopora_meandrina_HIv1___Sc0000011	1136360	1136777	418	315	14	0.022222222222222223	-	UACCUGGUUGAUUCUGCA	179	312	0	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1205060-1205491	Cluster_3747	Pocillopora_meandrina_HIv1___Sc0000011	1205060	1205491	432	186	83	0.005376344086021506	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	18	3	180	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1284991-1285401	Cluster_3748	Pocillopora_meandrina_HIv1___Sc0000011	1284991	1285401	411	189	130	0.4708994708994709	.	UCGGGAUAUGUAGUUGCGUCA	12	100	15	61	8	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1293175-1293610	Cluster_3749	Pocillopora_meandrina_HIv1___Sc0000011	1293175	1293610	436	241	101	0.07883817427385892	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	30	1	221	0	2	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1294907-1295316	Cluster_3750	Pocillopora_meandrina_HIv1___Sc0000011	1294907	1295316	410	176	110	0.10795454545454546	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	17	1	166	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1295664-1296094	Cluster_3751	Pocillopora_meandrina_HIv1___Sc0000011	1295664	1296094	431	709	201	0.021156558533145273	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	171	2	694	1	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1313428-1313857	Cluster_3752	Pocillopora_meandrina_HIv1___Sc0000011	1313428	1313857	430	216	57	0.037037037037037035	-	AGACAAAACAAGAUUUUGAGAACUGCUUCA	60	3	200	0	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1415864-1417125	Cluster_3753	Pocillopora_meandrina_HIv1___Sc0000011	1415864	1417125	1262	1480	418	0.13716216216216215	-	UAUCCAUGGUACAAAAAUUCGACUCACA	125	22	1339	8	5	23	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1425934-1426348	Cluster_3754	Pocillopora_meandrina_HIv1___Sc0000011	1425934	1426348	415	103	14	1.0	+	CAAACGAAGCCGGACU	50	102	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1449371-1449822	Cluster_3755	Pocillopora_meandrina_HIv1___Sc0000011	1449371	1449822	452	304	135	0.26973684210526316	.	AGUUGACAUACUGACUGGUACAAAUAAUGGU	21	20	241	3	5	10	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1450351-1450780	Cluster_3756	Pocillopora_meandrina_HIv1___Sc0000011	1450351	1450780	430	731	63	0.017783857729138167	-	UGAAACUCUGAUCUGAAAAUAUUUUUAA	202	3	724	2	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1575633-1576050	Cluster_3757	Pocillopora_meandrina_HIv1___Sc0000011	1575633	1576050	418	278	12	0.9856115107913669	+	UACCCGGAGGAAAAGAAA	134	274	1	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1922359-1922776	Cluster_3758	Pocillopora_meandrina_HIv1___Sc0000011	1922359	1922776	418	122	6	0.9836065573770492	+	GCUUUGCAUGGAACAAGG	111	121	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1976762-1977176	Cluster_3759	Pocillopora_meandrina_HIv1___Sc0000011	1976762	1977176	415	101	29	0.009900990099009901	-	UCAAAUGAGAACUUUG	34	92	7	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2021516-2021923	Cluster_3760	Pocillopora_meandrina_HIv1___Sc0000011	2021516	2021923	408	81	32	0.9506172839506173	+	UUCUGUGAUAUGGAGGUGCUAUCGUCCGU	18	7	68	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2022131-2022898	Cluster_3761	Pocillopora_meandrina_HIv1___Sc0000011	2022131	2022898	768	3849	212	0.06027539620680696	-	CUGGAAAUUUGACUUGCAUGUAGUGUGAUC	2043	33	3723	20	5	16	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2113956-2114378	Cluster_3762	Pocillopora_meandrina_HIv1___Sc0000011	2113956	2114378	423	163	96	0.0	-	AGAGGAAGAACGUGAACGAA	9	70	55	10	5	16	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2235139-2235748	Cluster_3763	Pocillopora_meandrina_HIv1___Sc0000011	2235139	2235748	610	1755	323	0.9561253561253561	+	UCAAAUACAACACCAAAAGAC	394	231	999	452	9	15	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2235755-2236277	Cluster_3764	Pocillopora_meandrina_HIv1___Sc0000011	2235755	2236277	523	550	266	0.8636363636363636	+	UUCGAACGAGCGUACGCAACGGUGUAUC	33	23	491	9	3	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2290352-2290769	Cluster_3765	Pocillopora_meandrina_HIv1___Sc0000011	2290352	2290769	418	282	31	0.02127659574468085	-	AUCCCUCCGGUGCCUCCC	97	273	4	3	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2464538-2464952	Cluster_3766	Pocillopora_meandrina_HIv1___Sc0000011	2464538	2464952	415	634	9	0.006309148264984227	-	CCGCGACUGCUGCCA	622	632	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2575797-2576978	Cluster_3767	Pocillopora_meandrina_HIv1___Sc0000011	2575797	2576978	1182	4402	409	0.7964561562925943	.	UCAGUCCAAGAUCAUUGAAGCCUCCCGUC	676	36	4226	52	4	24	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2595018-2595447	Cluster_3768	Pocillopora_meandrina_HIv1___Sc0000011	2595018	2595447	430	92	9	1.0	+	UUUGUGAUGAUUGUGGUCUUGCUACUGGUG	73	1	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2740916-2741333	Cluster_3769	Pocillopora_meandrina_HIv1___Sc0000011	2740916	2741333	418	1433	39	0.0	-	CUUUCCGAGGUCGCGGA	387	1432	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2863633-2864064	Cluster_3770	Pocillopora_meandrina_HIv1___Sc0000011	2863633	2864064	432	373	88	0.9222520107238605	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	60	1	371	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2967607-2968021	Cluster_3771	Pocillopora_meandrina_HIv1___Sc0000011	2967607	2968021	415	113	7	0.008849557522123894	-	CCGCGACUGCUGCCA	106	113	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3070672-3071108	Cluster_3772	Pocillopora_meandrina_HIv1___Sc0000011	3070672	3071108	437	275	81	0.9890909090909091	+	UGAUCAUGCCGUCUGAUGCUAUGCCUUU	67	0	272	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3071248-3071764	Cluster_3773	Pocillopora_meandrina_HIv1___Sc0000011	3071248	3071764	517	4242	539	0.8948609146628949	+	UUGGACGCGUUGCUUGUCUGAACAAGGC	637	14	3923	26	13	131	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3073868-3074297	Cluster_3774	Pocillopora_meandrina_HIv1___Sc0000011	3073868	3074297	430	170	46	0.9823529411764705	+	UGUACUGUGAACAUAGUGUUACCAACCAUU	80	0	169	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3101017-3101433	Cluster_3775	Pocillopora_meandrina_HIv1___Sc0000011	3101017	3101433	417	130	13	0.1076923076923077	-	AACCCGCAUCUCCACCA	77	130	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3164536-3165009	Cluster_3776	Pocillopora_meandrina_HIv1___Sc0000011	3164536	3165009	474	590	148	0.1711864406779661	-	AAGUAUCGAAACGAUCAAGAAGUAAGUC	127	6	563	1	4	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3260156-3260798	Cluster_3777	Pocillopora_meandrina_HIv1___Sc0000011	3260156	3260798	643	500	381	0.004	-	GCGAUCACUGGGGAAACAAGC	6	167	170	43	41	48	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3261970-3262587	Cluster_3778	Pocillopora_meandrina_HIv1___Sc0000011	3261970	3262587	618	596	422	0.013422818791946308	-	UGUGCCCUGAUGGUAAAACUGUAGAGUA	9	188	224	37	58	39	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3270260-3270678	Cluster_3779	Pocillopora_meandrina_HIv1___Sc0000011	3270260	3270678	419	321	236	0.003115264797507788	-	UAAUGAAACAGGACGACCAAGCG	7	135	82	40	14	25	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3341020-3341434	Cluster_3780	Pocillopora_meandrina_HIv1___Sc0000011	3341020	3341434	415	874	10	0.005720823798627002	-	UCUGGAGUCUCGGCC	826	874	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3422687-3423112	Cluster_3781	Pocillopora_meandrina_HIv1___Sc0000011	3422687	3423112	426	165	63	0.8727272727272727	+	UUUGUUAGGAGAGUCUGCAACUAAGC	26	2	153	3	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3431914-3432353	Cluster_3782	Pocillopora_meandrina_HIv1___Sc0000011	3431914	3432353	440	783	154	0.06768837803320563	-	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	139	6	745	5	2	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3437444-3437874	Cluster_3783	Pocillopora_meandrina_HIv1___Sc0000011	3437444	3437874	431	469	133	1.0	+	UGAUCUUUAAAGUGAAAUUCGCAGGACUUAA	117	42	422	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3478591-3478999	Cluster_3784	Pocillopora_meandrina_HIv1___Sc0000011	3478591	3478999	409	181	108	0.47513812154696133	.	ACUGGAUACAAAACUGCUCGAUGC	20	5	125	2	4	7	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3479394-3479821	Cluster_3785	Pocillopora_meandrina_HIv1___Sc0000011	3479394	3479821	428	198	84	0.03535353535353535	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	55	2	186	1	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3482219-3482714	Cluster_3786	Pocillopora_meandrina_HIv1___Sc0000011	3482219	3482714	496	1657	256	0.10380205190102595	-	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	150	9	1605	22	1	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3487323-3487892	Cluster_3787	Pocillopora_meandrina_HIv1___Sc0000011	3487323	3487892	570	368	133	0.9972826086956522	+	UGAACCCGCGUCUGUCGUGCUACCAAGAUA	37	12	346	0	2	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3488573-3488991	Cluster_3788	Pocillopora_meandrina_HIv1___Sc0000011	3488573	3488991	419	115	44	1.0	+	UGUGCAUUGCAACAUCUGCUAGAUCCUUUGC	35	3	110	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3680928-3681472	Cluster_3789	Pocillopora_meandrina_HIv1___Sc0000011	3680928	3681472	545	458	193	0.08078602620087336	-	UUAAACCGACUCACAGUCCGAUUCGAAU	42	5	435	1	0	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3697531-3697936	Cluster_3790	Pocillopora_meandrina_HIv1___Sc0000011	3697531	3697936	406	229	160	1.0	+	AAGAUUGAUCCUGGCGCU	6	91	68	19	8	22	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3698609-3699028	Cluster_3791	Pocillopora_meandrina_HIv1___Sc0000011	3698609	3699028	420	228	135	0.9956140350877193	+	CGAAAAGAAUGGGACUUAUU	9	76	96	19	8	24	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3706024-3706443	Cluster_3792	Pocillopora_meandrina_HIv1___Sc0000011	3706024	3706443	420	274	180	0.9963503649635036	+	CGUGAUCUAGAUGCGUGAUUCGGGGAU	15	108	83	26	16	14	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3706670-3707242	Cluster_3793	Pocillopora_meandrina_HIv1___Sc0000011	3706670	3707242	573	393	278	0.9974554707379135	+	CAUCGAAAAGAAUGGGACUUAUU	10	104	133	37	36	37	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3743749-3744169	Cluster_3794	Pocillopora_meandrina_HIv1___Sc0000011	3743749	3744169	421	194	138	1.0	+	GACGUGGUUCGACAACUGAGAGAAU	9	63	85	7	19	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3749236-3749651	Cluster_3795	Pocillopora_meandrina_HIv1___Sc0000011	3749236	3749651	416	95	21	0.14736842105263157	-	GCGGGAAUAGCUCAGC	69	84	3	2	1	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3767034-3767444	Cluster_3796	Pocillopora_meandrina_HIv1___Sc0000011	3767034	3767444	411	159	95	0.7672955974842768	.	UUCAUCUUGUGAUCUAUUCGAAUUGUUU	15	7	123	0	4	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3781168-3781585	Cluster_3797	Pocillopora_meandrina_HIv1___Sc0000011	3781168	3781585	418	155	17	0.03225806451612903	-	ACUCGGCCGUGGAUUGGA	36	154	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3851657-3852086	Cluster_3798	Pocillopora_meandrina_HIv1___Sc0000011	3851657	3852086	430	486	130	0.13580246913580246	-	UUGGAUAAUUUUGACGAAACCAGAGACA	167	5	446	3	6	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3852351-3852895	Cluster_3799	Pocillopora_meandrina_HIv1___Sc0000011	3852351	3852895	545	356	154	0.9101123595505618	+	AGUUUGCUGAUUUCCUGGUGCUUUGCGA	26	8	296	4	6	12	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3853490-3854454	Cluster_3800	Pocillopora_meandrina_HIv1___Sc0000011	3853490	3854454	965	901	384	0.48612652608213097	.	ACAGGAAGUACAACCACAGA	86	145	710	6	14	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3855303-3855819	Cluster_3801	Pocillopora_meandrina_HIv1___Sc0000011	3855303	3855819	517	342	171	0.30409356725146197	.	UGAAUGGGUCUUUCCAAAACUGAUGGGG	15	12	292	1	6	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4137651-4138080	Cluster_3802	Pocillopora_meandrina_HIv1___Sc0000011	4137651	4138080	430	543	50	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUCG	204	0	538	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4143432-4143861	Cluster_3803	Pocillopora_meandrina_HIv1___Sc0000011	4143432	4143861	430	341	69	0.02932551319648094	-	UGAUCAAGUUUCCUAUCGCCUGUAAACA	91	3	332	2	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4433355-4433903	Cluster_3804	Pocillopora_meandrina_HIv1___Sc0000011	4433355	4433903	549	466	346	0.9978540772532188	+	CGAUCCUGAACUUUGCACUCA	8	170	148	39	34	49	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4435000-4435404	Cluster_3805	Pocillopora_meandrina_HIv1___Sc0000011	4435000	4435404	405	351	271	0.9886039886039886	+	AACUGACCGUGCCGUAUGCUGU	4	175	86	17	30	24	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4435430-4435847	Cluster_3806	Pocillopora_meandrina_HIv1___Sc0000011	4435430	4435847	418	273	164	1.0	+	UGUGCUGUGGGAUACU	13	165	41	20	23	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4543640-4544059	Cluster_3807	Pocillopora_meandrina_HIv1___Sc0000011	4543640	4544059	420	116	56	1.0	+	UUUCUGCUGGUUGGUGGAGCUCUGGCAGUU	21	30	62	9	7	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4551808-4552227	Cluster_3808	Pocillopora_meandrina_HIv1___Sc0000011	4551808	4552227	420	183	143	0.994535519125683	+	GGAAACUCGACGUAAACGCU	5	74	59	6	25	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4630466-4630879	Cluster_3809	Pocillopora_meandrina_HIv1___Sc0000011	4630466	4630879	414	126	45	0.36507936507936506	.	CCCGUGUUGUAGGCG	27	104	15	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4710882-4711311	Cluster_3810	Pocillopora_meandrina_HIv1___Sc0000011	4710882	4711311	430	175	58	0.005714285714285714	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	44	1	173	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4885882-4886715	Cluster_3811	Pocillopora_meandrina_HIv1___Sc0000011	4885882	4886715	834	651	78	0.9846390168970814	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	107	2	628	1	0	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4887046-4887693	Cluster_3812	Pocillopora_meandrina_HIv1___Sc0000011	4887046	4887693	648	265	84	0.9660377358490566	+	AUGGGUCUUAUUGAACAUUACAGAACAGCA	61	9	198	3	6	7	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4893406-4893823	Cluster_3813	Pocillopora_meandrina_HIv1___Sc0000011	4893406	4893823	418	135	78	0.9777777777777777	+	AGAGUUUUGAAGUAAAUCGGCGAAUCGUU	15	1	115	2	1	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4940748-4941167	Cluster_3814	Pocillopora_meandrina_HIv1___Sc0000011	4940748	4941167	420	132	58	0.0	-	CCCUUAACAGCUUGUACUCUG	19	57	22	40	6	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5063660-5064076	Cluster_3815	Pocillopora_meandrina_HIv1___Sc0000011	5063660	5064076	417	272	41	0.0	-	GAAGUCGGCAAAAUGG	49	272	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5215532-5215946	Cluster_3816	Pocillopora_meandrina_HIv1___Sc0000011	5215532	5215946	415	185	4	0.9945945945945946	+	GCCGGUCGUUGGGGU	181	185	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5464958-5465391	Cluster_3817	Pocillopora_meandrina_HIv1___Sc0000011	5464958	5465391	434	326	88	0.015337423312883436	-	UGUGUUCUUUUCUUCUCGUGUAGAUCCG	47	1	299	16	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5608021-5608440	Cluster_3818	Pocillopora_meandrina_HIv1___Sc0000011	5608021	5608440	420	187	146	0.983957219251337	+	AGGGCUGAAGCGACAGAGU	6	68	71	17	17	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5682041-5682454	Cluster_3819	Pocillopora_meandrina_HIv1___Sc0000011	5682041	5682454	414	113	91	0.017699115044247787	-	GAAAUGGCGGUAGGACUCCACAAGGGUCA	4	38	47	5	1	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5740299-5740769	Cluster_3820	Pocillopora_meandrina_HIv1___Sc0000011	5740299	5740769	471	2523	500	0.9996036464526358	+	CCCAAAUGAUGAGCAGAUU	188	828	1205	79	102	120	189	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5891753-5892167	Cluster_3821	Pocillopora_meandrina_HIv1___Sc0000011	5891753	5892167	415	94	10	0.9680851063829787	+	ACGGAGAACUCUUUUUUU	33	92	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5937069-5937486	Cluster_3822	Pocillopora_meandrina_HIv1___Sc0000011	5937069	5937486	418	264	120	0.3522727272727273	.	UCUUGACUCUUCUCGAUAUCCUCUAUGG	23	9	208	3	12	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5937633-5938061	Cluster_3823	Pocillopora_meandrina_HIv1___Sc0000011	5937633	5938061	429	177	38	0.011299435028248588	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	72	0	164	0	0	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5952504-5952918	Cluster_3824	Pocillopora_meandrina_HIv1___Sc0000011	5952504	5952918	415	91	4	0.0	-	ACGACUGCUGCCGGC	71	91	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6046750-6047559	Cluster_3825	Pocillopora_meandrina_HIv1___Sc0000011	6046750	6047559	810	600	213	0.04666666666666667	-	UCGGUGUUUUCAAUGUUUAUCGGUUCGG	59	1	585	1	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6190043-6190464	Cluster_3826	Pocillopora_meandrina_HIv1___Sc0000011	6190043	6190464	422	127	33	0.8346456692913385	+	AAUUGGUAAUGAGAAUAAUCUA	60	15	0	13	79	17	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6215869-6216344	Cluster_3827	Pocillopora_meandrina_HIv1___Sc0000011	6215869	6216344	476	1958	346	0.0010214504596527069	-	AGCCAGUGACGACUUAAUAUAUUCA	120	397	1374	27	41	47	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6216755-6217197	Cluster_3828	Pocillopora_meandrina_HIv1___Sc0000011	6216755	6217197	443	345	129	0.005797101449275362	-	CAAAAUUUCUGAGGCCA	50	169	104	11	8	22	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6217611-6218693	Cluster_3829	Pocillopora_meandrina_HIv1___Sc0000011	6217611	6218693	1083	6411	979	0.00031196381219778506	-	CACUCUGUGACUUGAUUAGAAAAUCU	473	1732	3112	355	500	400	312	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6218840-6219312	Cluster_3830	Pocillopora_meandrina_HIv1___Sc0000011	6218840	6219312	473	18414	1095	0.00016291951775822744	-	GUGUGUGAUGACUGCAUAGUUCAACUGAACA	4986	2969	11855	599	605	871	1515	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6219544-6220346	Cluster_3831	Pocillopora_meandrina_HIv1___Sc0000011	6219544	6220346	803	3562	813	0.0005614823133071309	-	GCACCUGAUGAAAUAACCUAUGACACA	144	712	2069	156	200	178	247	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6220823-6221301	Cluster_3832	Pocillopora_meandrina_HIv1___Sc0000011	6220823	6221301	479	1963	573	0.0005094243504839531	-	GAGAAUCAUGACUGUGUCAACUGAAGGUA	56	329	1067	115	177	156	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6222022-6222430	Cluster_3833	Pocillopora_meandrina_HIv1___Sc0000011	6222022	6222430	409	220	173	1.0	+	GAGAGUUUGAACUGUGUC	4	71	83	17	19	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6224058-6224472	Cluster_3834	Pocillopora_meandrina_HIv1___Sc0000011	6224058	6224472	415	283	219	0.9964664310954063	+	AAAAAGAGGGAGAAAAGAACAUCU	4	82	103	28	16	31	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6224564-6224977	Cluster_3835	Pocillopora_meandrina_HIv1___Sc0000011	6224564	6224977	414	289	203	0.9965397923875432	+	UUCUUUGAUGGAGAGGACUUCUCAGA	6	107	98	16	13	16	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6225961-6226391	Cluster_3836	Pocillopora_meandrina_HIv1___Sc0000011	6225961	6226391	431	410	263	1.0	+	GUGCUGCUAAUGGACAUGAAAC	16	144	123	20	48	36	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6274499-6274927	Cluster_3837	Pocillopora_meandrina_HIv1___Sc0000011	6274499	6274927	429	284	24	0.14084507042253522	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	167	1	281	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6322907-6323442	Cluster_3838	Pocillopora_meandrina_HIv1___Sc0000011	6322907	6323442	536	2673	481	0.6258885147774037	.	AAGAGUGUUAUCUAUUUUAAUAAACUGAGU	476	27	2442	6	14	63	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6422647-6423063	Cluster_3839	Pocillopora_meandrina_HIv1___Sc0000011	6422647	6423063	417	366	30	0.00546448087431694	-	GAGAGGACUCUUUUU	64	365	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6464950-6465484	Cluster_3840	Pocillopora_meandrina_HIv1___Sc0000011	6464950	6465484	535	936	300	0.8728632478632479	+	GCCGGUAUUGGUGCA	46	661	62	124	32	39	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6473164-6473733	Cluster_3841	Pocillopora_meandrina_HIv1___Sc0000011	6473164	6473733	570	4968	712	0.9953703703703703	+	AGAAGCGGUAGGAUCUCCUGUUCG	905	1799	1306	460	206	205	992	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6476865-6477429	Cluster_3842	Pocillopora_meandrina_HIv1___Sc0000011	6476865	6477429	565	3845	1087	0.988556566970091	+	GAGUAGGUGCACCGCUGACA	142	2055	561	382	433	221	193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6480866-6481343	Cluster_3843	Pocillopora_meandrina_HIv1___Sc0000011	6480866	6481343	478	806	382	0.9789081885856079	+	GUUACUGACGUAGGCUUGA	93	370	166	80	56	61	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6483576-6484155	Cluster_3844	Pocillopora_meandrina_HIv1___Sc0000011	6483576	6484155	580	1039	302	0.9932627526467758	+	AGAAAAGGUGCACCGCUGGCA	50	652	176	143	45	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6485782-6486366	Cluster_3845	Pocillopora_meandrina_HIv1___Sc0000011	6485782	6486366	585	5484	1164	0.9821298322392414	+	AAGUGAUCACCUGCCGUCA	1141	3763	846	348	180	197	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6489550-6490252	Cluster_3846	Pocillopora_meandrina_HIv1___Sc0000011	6489550	6490252	703	1919	640	0.9921834288692027	+	GUGUUCGGCUUAUAAAACGUCAAGGU	111	853	497	250	90	101	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6645201-6645716	Cluster_3847	Pocillopora_meandrina_HIv1___Sc0000011	6645201	6645716	516	231	79	0.354978354978355	.	UUAGCGACGAGUGUUCUAUUUCCCUUCAGG	30	1	223	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6727215-6727635	Cluster_3848	Pocillopora_meandrina_HIv1___Sc0000011	6727215	6727635	421	123	78	0.926829268292683	+	UUCAAUGGGAAAACGAGAAUAGCGUGAGU	9	3	92	5	1	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7000730-7001147	Cluster_3849	Pocillopora_meandrina_HIv1___Sc0000011	7000730	7001147	418	206	15	0.9951456310679612	+	UUCUUGGAAUUGCAUGCC	101	204	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7091828-7092256	Cluster_3850	Pocillopora_meandrina_HIv1___Sc0000011	7091828	7092256	429	315	85	0.6793650793650794	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	123	9	262	4	2	12	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7092810-7093233	Cluster_3851	Pocillopora_meandrina_HIv1___Sc0000011	7092810	7093233	424	764	177	0.837696335078534	+	UGAAGUCGAGCUAGAAGAGGA	103	284	125	256	62	26	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7517305-7517727	Cluster_3852	Pocillopora_meandrina_HIv1___Sc0000011	7517305	7517727	423	93	19	1.0	+	AGUGGAGGCCUGUAAUUGCUGCUC	30	17	32	0	0	14	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7538618-7539082	Cluster_3853	Pocillopora_meandrina_HIv1___Sc0000011	7538618	7539082	465	692	220	0.010115606936416185	-	GGUAGCGUGGCCGAGU	86	580	41	22	25	20	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7637706-7638450	Cluster_3854	Pocillopora_meandrina_HIv1___Sc0000011	7637706	7638450	745	1287	788	0.005439005439005439	-	CCACGGUGAUUGGGGAUUAA	14	379	549	88	79	87	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7638532-7638933	Cluster_3855	Pocillopora_meandrina_HIv1___Sc0000011	7638532	7638933	402	184	144	0.005434782608695652	-	GACAGAACUGUUGAUCAGAAAGC	4	64	73	17	5	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7716508-7716924	Cluster_3856	Pocillopora_meandrina_HIv1___Sc0000011	7716508	7716924	417	106	11	1.0	+	GUGAAACUGCGAAUGGU	46	100	4	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7745411-7745825	Cluster_3857	Pocillopora_meandrina_HIv1___Sc0000011	7745411	7745825	415	139	13	1.0	+	GAGCCACCUCUGACC	88	139	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7770864-7771293	Cluster_3858	Pocillopora_meandrina_HIv1___Sc0000011	7770864	7771293	430	336	27	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	188	0	335	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8011145-8011573	Cluster_3859	Pocillopora_meandrina_HIv1___Sc0000011	8011145	8011573	429	156	56	0.9807692307692307	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	19	0	154	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8012096-8012544	Cluster_3860	Pocillopora_meandrina_HIv1___Sc0000011	8012096	8012544	449	462	209	0.7922077922077922	.	UAUGACGUUCCAGAAUCUUUGACAAAA	42	0	446	3	5	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8012714-8013502	Cluster_3861	Pocillopora_meandrina_HIv1___Sc0000011	8012714	8013502	789	872	319	0.9392201834862385	+	UCCGUGACACAACGACUUUGCCUUGCUU	127	7	848	0	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8276049-8276475	Cluster_3862	Pocillopora_meandrina_HIv1___Sc0000011	8276049	8276475	427	142	62	0.24647887323943662	.	UAACAGGAUCAACAAAGUGUCGAGCAGG	25	4	135	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8301205-8301621	Cluster_3863	Pocillopora_meandrina_HIv1___Sc0000011	8301205	8301621	417	377	29	0.9549071618037135	+	CCCCCGCAUCUCCACCA	209	377	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8316675-8317090	Cluster_3864	Pocillopora_meandrina_HIv1___Sc0000011	8316675	8317090	416	153	15	0.013071895424836602	-	GAGUGCGCUCUUAACC	98	152	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8412931-8413349	Cluster_3865	Pocillopora_meandrina_HIv1___Sc0000011	8412931	8413349	419	692	33	0.0	-	GGGGCUGUGGCUCAGUUGG	259	688	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8478554-8479134	Cluster_3866	Pocillopora_meandrina_HIv1___Sc0000011	8478554	8479134	581	1013	388	0.6288252714708786	.	CGUGUAAACAAGCGAUCUGUAAGA	108	33	743	16	16	31	174	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8490498-8491052	Cluster_3867	Pocillopora_meandrina_HIv1___Sc0000011	8490498	8491052	555	756	240	0.8955026455026455	+	UAGUAUAACUUUGAUCUGAUGAAAAUAAUC	276	11	695	2	13	11	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8492338-8492760	Cluster_3868	Pocillopora_meandrina_HIv1___Sc0000011	8492338	8492760	423	135	43	0.9777777777777777	+	UGAUAAUCAAAACGUCGGGCACAAGUCACU	51	0	120	2	3	10	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8494971-8496105	Cluster_3869	Pocillopora_meandrina_HIv1___Sc0000011	8494971	8496105	1135	7077	736	0.9489896848947295	+	UGAAAAAAUCUUCUGUUAUAAACACCUGA	1768	53	6671	29	20	89	215	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8499550-8500281	Cluster_3870	Pocillopora_meandrina_HIv1___Sc0000011	8499550	8500281	732	2033	266	0.8868666994589277	+	UGAGAAGAACUUCACUAACUUGACUAGUGA	926	12	1988	1	8	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8500386-8500808	Cluster_3871	Pocillopora_meandrina_HIv1___Sc0000011	8500386	8500808	423	200	77	0.66	.	UCAUCUCUAUUAUUGGGUCGCUUGU	29	2	190	0	0	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8534433-8535505	Cluster_3872	Pocillopora_meandrina_HIv1___Sc0000011	8534433	8535505	1073	941	313	0.14771519659936239	-	UGCGCAAUCGUGAUCAAAAAUAUCCUC	84	7	887	4	2	13	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8559009-8559423	Cluster_3873	Pocillopora_meandrina_HIv1___Sc0000011	8559009	8559423	415	137	14	1.0	+	CGGAACUGGGCGUCA	94	136	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8580119-8580551	Cluster_3874	Pocillopora_meandrina_HIv1___Sc0000011	8580119	8580551	433	245	126	0.16326530612244897	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	36	6	218	0	1	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8581778-8582479	Cluster_3875	Pocillopora_meandrina_HIv1___Sc0000011	8581778	8582479	702	276	140	0.07608695652173914	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	30	5	259	1	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8622522-8623855	Cluster_3876	Pocillopora_meandrina_HIv1___Sc0000011	8622522	8623855	1334	2219	761	0.167192429022082	-	UGGAUUACAAGUAAACACAACUGCCUGU	238	13	1969	9	19	133	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8632776-8633199	Cluster_3877	Pocillopora_meandrina_HIv1___Sc0000011	8632776	8633199	424	154	57	0.8961038961038961	+	UGGGUCGUAUUCCUAAAUCUUGAGCAA	20	13	124	1	0	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8759530-8759949	Cluster_3878	Pocillopora_meandrina_HIv1___Sc0000011	8759530	8759949	420	103	43	0.7281553398058253	.	UAUGCAUUGAACGGUAAGGGUAU	33	22	3	14	4	49	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8942245-8942671	Cluster_3879	Pocillopora_meandrina_HIv1___Sc0000011	8942245	8942671	427	735	89	0.06394557823129252	-	UUUCAAACUAAGGAAGGAGAAAGG	159	13	399	12	34	27	250	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8943032-8943461	Cluster_3880	Pocillopora_meandrina_HIv1___Sc0000011	8943032	8943461	430	1437	96	0.9826026443980515	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	747	9	1416	2	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8989633-8990060	Cluster_3881	Pocillopora_meandrina_HIv1___Sc0000011	8989633	8990060	428	81	21	0.012345679012345678	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	23	0	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9386857-9387285	Cluster_3882	Pocillopora_meandrina_HIv1___Sc0000011	9386857	9387285	429	2710	77	0.0	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2129	4	2704	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9569667-9570082	Cluster_3883	Pocillopora_meandrina_HIv1___Sc0000011	9569667	9570082	416	169	41	0.8994082840236687	+	CCCGUGUUGUAGGCGU	45	160	5	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9637998-9638410	Cluster_3884	Pocillopora_meandrina_HIv1___Sc0000011	9637998	9638410	413	160	96	0.0	-	UCCAGCUAUGUGAUCUGAACUGAAAAGUUU	33	35	93	7	10	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9680438-9680859	Cluster_3885	Pocillopora_meandrina_HIv1___Sc0000011	9680438	9680859	422	118	84	0.8220338983050848	+	UUAACACUAUAAACAUUCUGAGGGCGAU	7	1	104	1	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9680873-9681301	Cluster_3886	Pocillopora_meandrina_HIv1___Sc0000011	9680873	9681301	429	187	93	0.893048128342246	+	UAAUGAACGUAUAGCCAUCCAGUUGAAC	12	2	174	0	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9711844-9712788	Cluster_3887	Pocillopora_meandrina_HIv1___Sc0000011	9711844	9712788	945	2160	750	0.08518518518518518	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	136	26	2014	8	13	25	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9712795-9713663	Cluster_3888	Pocillopora_meandrina_HIv1___Sc0000011	9712795	9713663	869	538	260	0.07063197026022305	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	29	3	513	2	0	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9713863-9715859	Cluster_3889	Pocillopora_meandrina_HIv1___Sc0000011	9713863	9715859	1997	3542	1192	0.05618294748729531	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	205	30	3288	21	21	75	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9739953-9741130	Cluster_3890	Pocillopora_meandrina_HIv1___Sc0000011	9739953	9741130	1178	1351	535	0.09696521095484827	-	UGUCACUUUGCCGAUGGCUUGACUCGGG	92	11	1218	7	16	58	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9742190-9742886	Cluster_3891	Pocillopora_meandrina_HIv1___Sc0000011	9742190	9742886	697	702	246	0.03561253561253561	-	UAGGACGCUCUACUCCCUCAGCAGUACGGU	68	5	648	1	6	4	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9743273-9744734	Cluster_3892	Pocillopora_meandrina_HIv1___Sc0000011	9743273	9744734	1462	2988	790	0.013721552878179385	-	UGACUUUGUACAGGACUGGACCCGUUUGUUC	196	37	2869	13	10	24	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9747736-9748158	Cluster_3893	Pocillopora_meandrina_HIv1___Sc0000011	9747736	9748158	423	528	44	0.9867424242424242	+	UGACUGUCGGUCAACUGUCGGC	209	18	2	9	302	197	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9787129-9788785	Cluster_3894	Pocillopora_meandrina_HIv1___Sc0000011	9787129	9788785	1657	8057	1743	0.04567456869802656	-	UGUGUGGUUUUUGUAAGAACUAAAAAGUUC	1651	85	7801	29	23	33	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9789366-9791702	Cluster_3895	Pocillopora_meandrina_HIv1___Sc0000011	9789366	9791702	2337	5867	2120	0.8026248508607465	+	UCGUAGUAAACAUGGCUUCUUUUUAAAGA	206	146	5252	46	45	186	192	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9794038-9794468	Cluster_3896	Pocillopora_meandrina_HIv1___Sc0000011	9794038	9794468	431	158	18	0.006329113924050633	-	UGAGUAAACCUUCUUUUAAAUUUGAACAUUU	76	0	157	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9794660-9795088	Cluster_3897	Pocillopora_meandrina_HIv1___Sc0000011	9794660	9795088	429	144	32	0.0	-	CACCAAAACAACGUAGCUCUUUUGCCAUC	82	0	143	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9806603-9807305	Cluster_3898	Pocillopora_meandrina_HIv1___Sc0000011	9806603	9807305	703	2652	311	0.7458521870286576	.	UGUGUUAGACUUUAACAGGAAAGAAGG	374	14	2604	11	6	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9808077-9808633	Cluster_3899	Pocillopora_meandrina_HIv1___Sc0000011	9808077	9808633	557	250	91	0.828	+	UGGAAUGAAGUUUAUGCAGUCUGCUAGA	36	0	226	1	2	2	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9809549-9809977	Cluster_3900	Pocillopora_meandrina_HIv1___Sc0000011	9809549	9809977	429	808	137	0.9245049504950495	+	UGAAUGCAUACUCUGGUAAACAGGACC	292	11	749	6	18	18	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9810006-9810654	Cluster_3901	Pocillopora_meandrina_HIv1___Sc0000011	9810006	9810654	649	1721	345	0.9488669378268448	+	UGACUAUCAUCUGAAAGGGGCAAUUGGU	285	30	1648	1	4	13	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9825524-9826474	Cluster_3902	Pocillopora_meandrina_HIv1___Sc0000011	9825524	9826474	951	1126	416	0.13232682060390763	-	UCUGUCUCGUAUCAUCUCAUCUGUGAGC	76	25	999	10	23	16	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9826663-9827089	Cluster_3903	Pocillopora_meandrina_HIv1___Sc0000011	9826663	9827089	427	266	148	0.06390977443609022	-	UCUUCUCCUUGACUUCCUUUUGUAGAGU	32	10	245	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9828072-9828840	Cluster_3904	Pocillopora_meandrina_HIv1___Sc0000011	9828072	9828840	769	436	201	0.06880733944954129	-	UGAUUCAUCAGUAUUAAUGACUGUAGU	43	15	394	1	5	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9845259-9845688	Cluster_3905	Pocillopora_meandrina_HIv1___Sc0000011	9845259	9845688	430	212	78	0.0047169811320754715	-	UAUUCAAAGUAAUCUCUGGAGAAGACUGGC	57	3	208	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9848383-9848810	Cluster_3906	Pocillopora_meandrina_HIv1___Sc0000011	9848383	9848810	428	297	108	0.010101010101010102	-	UCAACGGUGCCACUCUGGACUUUCCUGU	51	1	291	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9849209-9849638	Cluster_3907	Pocillopora_meandrina_HIv1___Sc0000011	9849209	9849638	430	193	53	0.0	-	UGAAUUUGACGUUUGACUGCCUUGUUCAGC	114	5	186	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9861493-9862035	Cluster_3908	Pocillopora_meandrina_HIv1___Sc0000011	9861493	9862035	543	1587	361	0.7731568998109641	.	GAAAGAAUUAGAGAAUGGGCGUCGCAGG	130	29	1025	28	36	123	346	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9869468-9869877	Cluster_3909	Pocillopora_meandrina_HIv1___Sc0000011	9869468	9869877	410	193	96	0.5906735751295337	.	UAAUAUCAGUUUCUGGUCAAGAUCAAGA	20	9	122	0	26	11	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9869941-9870465	Cluster_3910	Pocillopora_meandrina_HIv1___Sc0000011	9869941	9870465	525	572	230	0.9108391608391608	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	49	7	492	1	0	10	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9874015-9875090	Cluster_3911	Pocillopora_meandrina_HIv1___Sc0000011	9874015	9875090	1076	571	202	0.014010507880910683	-	UGCUUCCAGGAAACAGGCAGAAAAUAUGC	97	14	545	2	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9876546-9876963	Cluster_3912	Pocillopora_meandrina_HIv1___Sc0000011	9876546	9876963	418	508	101	0.0	-	AUCCCACUUCUGACACCA	188	420	79	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9881650-9882549	Cluster_3913	Pocillopora_meandrina_HIv1___Sc0000011	9881650	9882549	900	819	382	0.0231990231990232	-	GACGAAGUGGCCGAA	42	74	715	5	5	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9883183-9883608	Cluster_3914	Pocillopora_meandrina_HIv1___Sc0000011	9883183	9883608	426	177	88	0.005649717514124294	-	UGCAGAAUCCUGAGCAAUAUUGUCUU	37	3	166	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10009077-10009493	Cluster_3915	Pocillopora_meandrina_HIv1___Sc0000011	10009077	10009493	417	403	17	0.02729528535980149	-	AUCCGCUACUUUGACCA	294	392	5	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10071736-10072152	Cluster_3916	Pocillopora_meandrina_HIv1___Sc0000011	10071736	10072152	417	191	121	0.09424083769633508	-	AUGUGAAGCAAGGAUCAUGAAGACU	16	64	77	16	3	16	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10238980-10239401	Cluster_3917	Pocillopora_meandrina_HIv1___Sc0000011	10238980	10239401	422	172	45	0.936046511627907	+	AUGAAAAUACGUAAUGCAGCUC	26	14	1	15	85	45	12	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10250224-10250643	Cluster_3918	Pocillopora_meandrina_HIv1___Sc0000011	10250224	10250643	420	1482	15	1.0	+	GAAGUUCUGGUUUAAAAAA	577	1481	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10323829-10326081	Cluster_3919	Pocillopora_meandrina_HIv1___Sc0000011	10323829	10326081	2253	18563	2741	0.9922965037978775	+	UGUGUAACUUAUCGUAUCCUGGUUGUCC	2652	140	17913	41	135	203	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10438249-10438800	Cluster_3920	Pocillopora_meandrina_HIv1___Sc0000011	10438249	10438800	552	412	288	0.9975728155339806	+	AACUUGUGAAUUAAUUGAAUGAUU	20	106	153	37	26	34	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10442829-10443451	Cluster_3921	Pocillopora_meandrina_HIv1___Sc0000011	10442829	10443451	623	1079	287	0.10750695088044486	-	UAAGAUUCCAAGAUAUUUAAAACAAGU	95	13	941	3	10	13	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:125340-125768	Cluster_3922	Pocillopora_meandrina_HIv1___Sc0000012	125340	125768	429	258	106	0.05426356589147287	-	UGUGAAUCUUUUUACUCGUUAUGUUAAGUAG	33	8	237	4	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:127941-128369	Cluster_3923	Pocillopora_meandrina_HIv1___Sc0000012	127941	128369	429	118	21	0.9830508474576272	+	GUGCGAGAUAAGAUCUCUGAAGAUGACAGG	44	5	107	0	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:234590-235005	Cluster_3924	Pocillopora_meandrina_HIv1___Sc0000012	234590	235005	416	254	44	1.0	+	GAGUGUGCUCUUGACC	45	225	12	3	5	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:241083-241499	Cluster_3925	Pocillopora_meandrina_HIv1___Sc0000012	241083	241499	417	166	128	0.9879518072289156	+	AAAGAAAUGAUUGAUCUUGUUCUGGACA	7	57	74	6	12	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:429014-429511	Cluster_3926	Pocillopora_meandrina_HIv1___Sc0000012	429014	429511	498	711	108	0.011251758087201125	-	CGAUCCAACAAGAACAAUAUGUGCUUACUA	153	8	682	0	6	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:546164-546579	Cluster_3927	Pocillopora_meandrina_HIv1___Sc0000012	546164	546579	416	315	24	0.9968253968253968	+	ACACUCUGUCUCGUGA	106	314	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:564147-564561	Cluster_3928	Pocillopora_meandrina_HIv1___Sc0000012	564147	564561	415	184	29	1.0	+	ACGGUGGAUCUCUAG	83	182	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:694963-695392	Cluster_3929	Pocillopora_meandrina_HIv1___Sc0000012	694963	695392	430	488	92	0.9651639344262295	+	UGCGUAGCUCAACACGAUUUCGUCAAAGGA	92	6	471	0	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:782088-782502	Cluster_3930	Pocillopora_meandrina_HIv1___Sc0000012	782088	782502	415	100	10	1.0	+	CCCCGUGUUGUAGGCA	34	100	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:879108-879525	Cluster_3931	Pocillopora_meandrina_HIv1___Sc0000012	879108	879525	418	145	96	0.006896551724137931	-	UUAGACAGUAUGCUAAAGACA	5	46	56	12	4	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:927500-927927	Cluster_3932	Pocillopora_meandrina_HIv1___Sc0000012	927500	927927	428	138	36	1.0	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	46	5	107	0	1	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:934758-935175	Cluster_3933	Pocillopora_meandrina_HIv1___Sc0000012	934758	935175	418	179	22	0.05027932960893855	-	UUGAACUCGACCCUGUCA	121	172	3	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1062766-1063180	Cluster_3934	Pocillopora_meandrina_HIv1___Sc0000012	1062766	1063180	415	97	13	0.9690721649484536	+	CCGUGUUGUAGGCUG	42	96	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1127321-1127875	Cluster_3935	Pocillopora_meandrina_HIv1___Sc0000012	1127321	1127875	555	564	275	0.09929078014184398	-	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	41	5	531	1	10	1	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1128430-1128965	Cluster_3936	Pocillopora_meandrina_HIv1___Sc0000012	1128430	1128965	536	220	128	0.03636363636363636	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	22	4	207	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1129184-1129616	Cluster_3937	Pocillopora_meandrina_HIv1___Sc0000012	1129184	1129616	433	330	123	0.06666666666666667	-	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	28	3	306	1	4	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1495883-1496342	Cluster_3938	Pocillopora_meandrina_HIv1___Sc0000012	1495883	1496342	460	602	202	0.0	-	CAGACAGAUACGGAGCUUACAGAU	52	155	154	34	106	47	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1574026-1575119	Cluster_3939	Pocillopora_meandrina_HIv1___Sc0000012	1574026	1575119	1094	1277	475	0.9772905246671887	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	82	10	1235	1	6	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1575154-1575556	Cluster_3940	Pocillopora_meandrina_HIv1___Sc0000012	1575154	1575556	403	155	91	0.9225806451612903	+	UGGGAAUCCGAAUCGUGGUACAAAGUCA	16	2	143	1	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1576712-1577155	Cluster_3941	Pocillopora_meandrina_HIv1___Sc0000012	1576712	1577155	444	939	322	0.9488817891373802	+	UGUUGCUCAAAGGUCUUACUAUACACCA	73	69	777	53	25	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1577210-1578249	Cluster_3942	Pocillopora_meandrina_HIv1___Sc0000012	1577210	1578249	1040	1798	594	0.9638487208008899	+	UCUGUCUGUAUUGUUUUGGACCACGAC	150	29	1717	11	5	22	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1578389-1579986	Cluster_3943	Pocillopora_meandrina_HIv1___Sc0000012	1578389	1579986	1598	2019	931	0.8469539375928677	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	93	26	1816	23	14	44	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1651624-1652044	Cluster_3944	Pocillopora_meandrina_HIv1___Sc0000012	1651624	1652044	421	86	34	1.0	+	UCUGUAAACUCCGUAUUUAACAACAAAU	14	0	83	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1700342-1700751	Cluster_3945	Pocillopora_meandrina_HIv1___Sc0000012	1700342	1700751	410	184	81	0.7989130434782609	.	AGAUACAAAAUGGUCAAGGUUCUUGUUG	13	9	163	0	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1720627-1721056	Cluster_3946	Pocillopora_meandrina_HIv1___Sc0000012	1720627	1721056	430	112	28	0.9821428571428571	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	43	0	110	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1778902-1779366	Cluster_3947	Pocillopora_meandrina_HIv1___Sc0000012	1778902	1779366	465	1012	261	0.8092885375494071	+	UCAUCAGUGAUCUCAGUUGAAUUGUAAACC	129	9	857	4	11	69	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1813691-1814109	Cluster_3948	Pocillopora_meandrina_HIv1___Sc0000012	1813691	1814109	419	238	14	0.029411764705882353	-	AACUUUUGACGGUGUCUAU	214	238	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1967316-1967732	Cluster_3949	Pocillopora_meandrina_HIv1___Sc0000012	1967316	1967732	417	915	58	0.9989071038251366	+	UCUCGGCUCCGGACUG	231	915	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2183586-2184001	Cluster_3950	Pocillopora_meandrina_HIv1___Sc0000012	2183586	2184001	416	136	24	1.0	+	CGAACUAGACCCUGUU	29	133	1	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2208552-2208967	Cluster_3951	Pocillopora_meandrina_HIv1___Sc0000012	2208552	2208967	416	140	10	1.0	+	UGAGACUUGAAGCGGA	57	140	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2637211-2637903	Cluster_3952	Pocillopora_meandrina_HIv1___Sc0000012	2637211	2637903	693	1117	597	0.9158460161145927	+	CAUGUCUGUCUGAGC	30	462	335	87	81	73	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2701391-2701806	Cluster_3953	Pocillopora_meandrina_HIv1___Sc0000012	2701391	2701806	416	113	7	0.008849557522123894	-	GCUGGAUGAUGAGACA	105	109	1	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2807434-2807851	Cluster_3954	Pocillopora_meandrina_HIv1___Sc0000012	2807434	2807851	418	128	22	0.9765625	+	GAAACAUGCUCUGAGCUC	52	122	5	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2886188-2886620	Cluster_3955	Pocillopora_meandrina_HIv1___Sc0000012	2886188	2886620	433	1389	281	0.0007199424046076314	-	AUUAACUGAAGACACCUGUAACUCUGAAU	240	139	1007	17	117	55	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2886971-2887446	Cluster_3956	Pocillopora_meandrina_HIv1___Sc0000012	2886971	2887446	476	2278	353	0.0	-	UGGAAUGAUGAGUCACUCUUUGAUA	256	544	1428	161	80	23	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2889479-2889955	Cluster_3957	Pocillopora_meandrina_HIv1___Sc0000012	2889479	2889955	477	2298	372	0.0	-	UUAACUGAAGACACCUUUUACUCUGAAU	329	147	1789	44	161	65	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2926923-2927342	Cluster_3958	Pocillopora_meandrina_HIv1___Sc0000012	2926923	2927342	420	161	58	0.16149068322981366	-	GGGCCUGUUUCGUGAAUCGC	37	111	9	26	11	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3012101-3012517	Cluster_3959	Pocillopora_meandrina_HIv1___Sc0000012	3012101	3012517	417	1132	105	0.014134275618374558	-	GCCCGGUUAGCUCAG	403	1085	26	5	10	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3102775-3103192	Cluster_3960	Pocillopora_meandrina_HIv1___Sc0000012	3102775	3103192	418	222	130	1.0	+	AGUGUUGCUGAACGAAAAAGGAA	11	79	78	19	21	17	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3291569-3291996	Cluster_3961	Pocillopora_meandrina_HIv1___Sc0000012	3291569	3291996	428	167	64	0.38922155688622756	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	38	1	153	1	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3295696-3296104	Cluster_3962	Pocillopora_meandrina_HIv1___Sc0000012	3295696	3296104	409	115	72	0.30434782608695654	.	UUAAAUCACAUUUACGCUGCAAUCUGG	6	1	92	1	1	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3301242-3301664	Cluster_3963	Pocillopora_meandrina_HIv1___Sc0000012	3301242	3301664	423	120	78	0.8333333333333334	+	UAACACUAUAAACAUUCUGAGGGCGAUU	12	0	106	5	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3301677-3302104	Cluster_3964	Pocillopora_meandrina_HIv1___Sc0000012	3301677	3302104	428	182	91	0.8406593406593407	+	UAAUGAACGUAUAGCCAUCCAGUUGAACU	15	3	174	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3417269-3417874	Cluster_3965	Pocillopora_meandrina_HIv1___Sc0000012	3417269	3417874	606	760	158	0.9157894736842105	+	UGGUAAAAUUCUGUUCAAAGU	95	12	574	132	10	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3443230-3443876	Cluster_3966	Pocillopora_meandrina_HIv1___Sc0000012	3443230	3443876	647	777	315	0.11196911196911197	-	UGAAAUACUUGUUCUUUUCCCUGGUUUGCC	77	4	726	14	3	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3443902-3444331	Cluster_3967	Pocillopora_meandrina_HIv1___Sc0000012	3443902	3444331	430	708	78	0.0	-	UCAGCUCUUUCUAACUCUGCAAUUUGAGGU	247	0	708	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3549634-3550061	Cluster_3968	Pocillopora_meandrina_HIv1___Sc0000012	3549634	3550061	428	164	57	0.9817073170731707	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	41	0	157	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3702105-3702532	Cluster_3969	Pocillopora_meandrina_HIv1___Sc0000012	3702105	3702532	428	83	22	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	19	2	79	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3728246-3728661	Cluster_3970	Pocillopora_meandrina_HIv1___Sc0000012	3728246	3728661	416	131	14	0.9923664122137404	+	AAGUGUGCUCUUAACC	67	130	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3841351-3841765	Cluster_3971	Pocillopora_meandrina_HIv1___Sc0000012	3841351	3841765	415	136	11	1.0	+	CUUCCCGAGGUCGCA	112	131	5	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3943387-3943815	Cluster_3972	Pocillopora_meandrina_HIv1___Sc0000012	3943387	3943815	429	102	18	0.0196078431372549	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	46	1	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4244145-4244572	Cluster_3973	Pocillopora_meandrina_HIv1___Sc0000012	4244145	4244572	428	112	23	0.008928571428571428	-	GAAGAUUUCUUUGAGAUAGAUGUAGCACA	39	4	104	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4299145-4299601	Cluster_3974	Pocillopora_meandrina_HIv1___Sc0000012	4299145	4299601	457	2512	190	0.9996019108280255	+	UAUUUGUACAUCGCUGACUUGUUU	526	105	706	20	109	561	1011	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4477900-4478319	Cluster_3975	Pocillopora_meandrina_HIv1___Sc0000012	4477900	4478319	420	22740	114	0.0	-	AAUCGGCCGUGGAUU	11848	22740	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4527933-4528348	Cluster_3976	Pocillopora_meandrina_HIv1___Sc0000012	4527933	4528348	416	269	168	0.6356877323420075	.	UUCGCGUCUGAAGCUGUUAA	28	140	57	45	16	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4724333-4724835	Cluster_3977	Pocillopora_meandrina_HIv1___Sc0000012	4724333	4724835	503	400	172	0.99	+	UUCUACUGCUGUAACUUCAUGAAUACUGC	34	8	383	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4724871-4725616	Cluster_3978	Pocillopora_meandrina_HIv1___Sc0000012	4724871	4725616	746	672	272	0.9940476190476191	+	UAAGUGCUUUUUCCGACUAACUUUUCUGU	42	18	627	9	3	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4908638-4909067	Cluster_3979	Pocillopora_meandrina_HIv1___Sc0000012	4908638	4909067	430	301	41	0.0033222591362126247	-	AUACUCUAGCAUUCAGACGGAAGAUUCGCU	123	17	276	4	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4929534-4929951	Cluster_3980	Pocillopora_meandrina_HIv1___Sc0000012	4929534	4929951	418	147	17	0.9863945578231292	+	CGGCCUGAAAAAAAAAAA	34	142	0	3	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5242362-5242790	Cluster_3981	Pocillopora_meandrina_HIv1___Sc0000012	5242362	5242790	429	119	32	1.0	+	UGCAUAUCUUGAACUAGUCGGUUGUGAUU	67	0	116	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5269393-5269920	Cluster_3982	Pocillopora_meandrina_HIv1___Sc0000012	5269393	5269920	528	754	454	0.014588859416445624	-	GUUCGAUUCCGGAGAGGGAGCCG	37	297	199	69	63	80	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5271160-5271578	Cluster_3983	Pocillopora_meandrina_HIv1___Sc0000012	5271160	5271578	419	133	43	0.9699248120300752	+	AACGAGACCUUGACCUGCU	21	131	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5275572-5276708	Cluster_3984	Pocillopora_meandrina_HIv1___Sc0000012	5275572	5276708	1137	13391	2480	0.001269509371966246	-	CUAGUACUGUGAAACUGCGAAUGGCU	806	3418	5523	899	909	934	1708	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5279849-5281604	Cluster_3985	Pocillopora_meandrina_HIv1___Sc0000012	5279849	5281604	1756	1363775	26295	9.019083059888911e-05	-	CAGCUGUGACCCUCGGGU	216358	911931	288042	84129	43802	21900	13971	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5282066-5282613	Cluster_3986	Pocillopora_meandrina_HIv1___Sc0000012	5282066	5282613	548	1246	135	0.05698234349919743	-	UCAUUCACAUCCAUCUGUAAGAAUUUGC	214	3	1166	1	3	5	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5295733-5297102	Cluster_3987	Pocillopora_meandrina_HIv1___Sc0000012	5295733	5297102	1370	7006640	50356	3.0114291586266742e-05	-	CUCGGGCUGAGACUUGAAGCA	1177292	2534942	1060908	1901467	384305	1019539	105479	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5299291-5303737	Cluster_3988	Pocillopora_meandrina_HIv1___Sc0000012	5299291	5303737	4447	951286	84048	0.9994712420870274	+	AACUUUUGACGGUGGAUCU	17871	392264	326160	66376	60889	53748	51849	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5461911-5462338	Cluster_3989	Pocillopora_meandrina_HIv1___Sc0000012	5461911	5462338	428	93	32	0.967741935483871	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	39	1	91	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5463579-5464005	Cluster_3990	Pocillopora_meandrina_HIv1___Sc0000012	5463579	5464005	427	248	145	0.7983870967741935	.	UGAGUCGAGGUUAUUCACAAUACGAGC	41	7	208	4	7	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5507240-5507668	Cluster_3991	Pocillopora_meandrina_HIv1___Sc0000012	5507240	5507668	429	592	57	0.8902027027027027	+	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	362	0	585	0	1	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5578525-5578951	Cluster_3992	Pocillopora_meandrina_HIv1___Sc0000012	5578525	5578951	427	152	62	0.09868421052631579	-	AAGGAUACCACAUUCGGAAGUGUAAGAGA	37	5	133	1	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5579115-5579537	Cluster_3993	Pocillopora_meandrina_HIv1___Sc0000012	5579115	5579537	423	94	36	0.3191489361702128	.	UUGUACCGGUCCAUAUGUCAACUGUUG	19	0	93	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5605813-5606228	Cluster_3994	Pocillopora_meandrina_HIv1___Sc0000012	5605813	5606228	416	270	163	0.7962962962962963	.	UGUGCUGAUUCAAACGGUCAUAACUUUUGA	16	76	137	37	13	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5664282-5664696	Cluster_3995	Pocillopora_meandrina_HIv1___Sc0000012	5664282	5664696	415	156	18	0.0	-	CCGCGACUGCUGCCC	92	151	3	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5739796-5740216	Cluster_3996	Pocillopora_meandrina_HIv1___Sc0000012	5739796	5740216	421	518	43	1.0	+	CUCGGGCUGAGACUUGACGAG	109	404	0	114	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5764850-5765263	Cluster_3997	Pocillopora_meandrina_HIv1___Sc0000012	5764850	5765263	414	88	15	0.0	-	AAGACUUGAAGCGGC	14	87	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5868872-5869344	Cluster_3998	Pocillopora_meandrina_HIv1___Sc0000012	5868872	5869344	473	223	113	0.9237668161434978	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	20	16	160	5	4	12	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6081718-6082147	Cluster_3999	Pocillopora_meandrina_HIv1___Sc0000012	6081718	6082147	430	166	74	0.030120481927710843	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGU	29	0	160	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6088640-6089060	Cluster_4000	Pocillopora_meandrina_HIv1___Sc0000012	6088640	6089060	421	120	33	0.975	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	30	0	119	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6098305-6100303	Cluster_4001	Pocillopora_meandrina_HIv1___Sc0000012	6098305	6100303	1999	3890	1317	0.10951156812339331	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	381	37	3639	30	17	47	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6100310-6100737	Cluster_4002	Pocillopora_meandrina_HIv1___Sc0000012	6100310	6100737	428	384	190	0.12760416666666666	-	UUGUCGUGAUCUUUCACUGCUUCUUGC	56	3	361	0	2	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6100855-6101281	Cluster_4003	Pocillopora_meandrina_HIv1___Sc0000012	6100855	6101281	427	189	99	0.1111111111111111	-	UGAACUUCUCGGCUCCAAACACUAUGG	34	4	169	1	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6101298-6101728	Cluster_4004	Pocillopora_meandrina_HIv1___Sc0000012	6101298	6101728	431	492	173	0.0508130081300813	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	67	1	465	1	1	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6101801-6103188	Cluster_4005	Pocillopora_meandrina_HIv1___Sc0000012	6101801	6103188	1388	1487	645	0.0988567585743107	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	65	38	1314	5	19	45	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6137888-6138307	Cluster_4006	Pocillopora_meandrina_HIv1___Sc0000012	6137888	6138307	420	152	76	0.9671052631578947	+	UACUUAACGUUGGCAGUACUG	33	13	78	53	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6183151-6183691	Cluster_4007	Pocillopora_meandrina_HIv1___Sc0000012	6183151	6183691	541	526	127	0.2623574144486692	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	159	2	494	6	1	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6200813-6201228	Cluster_4008	Pocillopora_meandrina_HIv1___Sc0000012	6200813	6201228	416	144	16	0.020833333333333332	-	UUACGAGGUCGCGGUC	77	144	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6342090-6342494	Cluster_4009	Pocillopora_meandrina_HIv1___Sc0000012	6342090	6342494	405	117	88	0.0	-	UAAGCAAAAACGAAUUCUAGUG	4	37	49	9	9	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6355105-6355520	Cluster_4010	Pocillopora_meandrina_HIv1___Sc0000012	6355105	6355520	416	181	14	0.9447513812154696	+	UCUGGAGUCUCGGAU	66	174	6	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6455183-6455276	Cluster_4011	Pocillopora_meandrina_HIv1___Sc0000012	6455183	6455276	94	2502	138	0.9996003197442046	+	UGAAAUACUCUGACGGAGUCAGC	1078	422	150	42	191	1410	287	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000012:6553869-6554283	Cluster_4012	Pocillopora_meandrina_HIv1___Sc0000012	6553869	6554283	415	180	8	1.0	+	UCCGCUGUAGUAUAG	159	172	8	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6591857-6592296	Cluster_4013	Pocillopora_meandrina_HIv1___Sc0000012	6591857	6592296	440	2331	180	0.001287001287001287	-	UCUGUUAGAAUGAAGAAAGGGACUCCGUC	396	30	2233	8	15	16	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6610946-6611372	Cluster_4014	Pocillopora_meandrina_HIv1___Sc0000012	6610946	6611372	427	183	55	0.3005464480874317	.	CGUGUUUGGAUUGCGAUCACCUGGAGCA	27	4	166	1	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6715855-6716293	Cluster_4015	Pocillopora_meandrina_HIv1___Sc0000012	6715855	6716293	439	405	119	0.291358024691358	.	CAAGAAGUACAAGUGGU	50	115	290	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6743354-6743998	Cluster_4016	Pocillopora_meandrina_HIv1___Sc0000012	6743354	6743998	645	3454	521	0.23335263462651998	.	GUGAUUUUCAGUUCAGGACAAUGCAAUUUU	419	57	2731	17	41	82	526	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6750710-6751473	Cluster_4017	Pocillopora_meandrina_HIv1___Sc0000012	6750710	6751473	764	1513	210	0.3331130204890945	.	UGAGAAAAAUGUGACAUGAGAAAUUGAUU	551	55	1361	1	9	22	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6939591-6940020	Cluster_4018	Pocillopora_meandrina_HIv1___Sc0000012	6939591	6940020	430	398	42	0.005025125628140704	-	AACUACUGCUCGUGCUCUAGAUAUGACG	146	19	377	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6963867-6964294	Cluster_4019	Pocillopora_meandrina_HIv1___Sc0000012	6963867	6964294	428	206	31	0.009708737864077669	-	AACUACUGCUCGUGCUCUAGAUAUGACA	106	9	196	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6972503-6972930	Cluster_4020	Pocillopora_meandrina_HIv1___Sc0000012	6972503	6972930	428	337	54	0.16023738872403562	-	AGGGACUGAAACAUCGACUGAAGACG	78	2	273	11	0	10	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6988644-6989901	Cluster_4021	Pocillopora_meandrina_HIv1___Sc0000012	6988644	6989901	1258	5014	1329	0.26585560430793775	.	UGUUGUCGAUUAGCUUUGGUACACAGUU	182	69	4322	43	283	116	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7218635-7219058	Cluster_4022	Pocillopora_meandrina_HIv1___Sc0000012	7218635	7219058	424	134	44	0.0	-	AAACGAUUGAAUAGCAUAACUGAUGAACUA	14	2	131	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7370061-7370475	Cluster_4023	Pocillopora_meandrina_HIv1___Sc0000012	7370061	7370475	415	113	12	0.9823008849557522	+	UUCCGAGGUCGAGGU	48	112	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7399945-7400360	Cluster_4024	Pocillopora_meandrina_HIv1___Sc0000012	7399945	7400360	416	765	17	0.006535947712418301	-	CUUGAAGCGGUUGGGU	703	761	3	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7535780-7536207	Cluster_4025	Pocillopora_meandrina_HIv1___Sc0000012	7535780	7536207	428	138	48	0.007246376811594203	-	UUUGAUCCGUCUUCGCAUGAAAUGCUGC	40	12	119	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7549463-7549893	Cluster_4026	Pocillopora_meandrina_HIv1___Sc0000012	7549463	7549893	431	2602	143	0.0003843197540353574	-	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	675	3	2590	4	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7554622-7555024	Cluster_4027	Pocillopora_meandrina_HIv1___Sc0000012	7554622	7555024	403	92	22	0.9565217391304348	+	UCCUCGGUAGCUCAGU	43	85	1	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7556167-7556578	Cluster_4028	Pocillopora_meandrina_HIv1___Sc0000012	7556167	7556578	412	139	73	0.9856115107913669	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	14	1	129	1	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7556645-7557690	Cluster_4029	Pocillopora_meandrina_HIv1___Sc0000012	7556645	7557690	1046	2561	735	0.9449433814916048	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	255	59	2362	11	31	43	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7557706-7559193	Cluster_4030	Pocillopora_meandrina_HIv1___Sc0000012	7557706	7559193	1488	4108	1363	0.9087147030185004	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	167	62	3662	27	35	159	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7660353-7660768	Cluster_4031	Pocillopora_meandrina_HIv1___Sc0000012	7660353	7660768	416	297	6	0.0	-	CCUGCCGGAACCACCA	154	297	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7917423-7917836	Cluster_4032	Pocillopora_meandrina_HIv1___Sc0000012	7917423	7917836	414	132	64	0.5378787878787878	.	UCUUGAUUCAAGUAGGCUUAACA	41	4	73	0	1	50	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7919105-7919763	Cluster_4033	Pocillopora_meandrina_HIv1___Sc0000012	7919105	7919763	659	1898	465	0.1517386722866175	-	UGUGUAGUUCUUCCUAAGACUUUCGUC	134	27	1720	21	10	35	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7920052-7920756	Cluster_4034	Pocillopora_meandrina_HIv1___Sc0000012	7920052	7920756	705	3603	519	0.05995004163197336	-	UGCAAUGGAUCUAGUACUAUCAAGUUC	887	47	3362	20	63	24	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7921185-7921614	Cluster_4035	Pocillopora_meandrina_HIv1___Sc0000012	7921185	7921614	430	745	150	0.978523489932886	+	UAGUACUGGUGAUUUCUGUUAAUGG	152	4	682	9	10	27	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7922225-7922759	Cluster_4036	Pocillopora_meandrina_HIv1___Sc0000012	7922225	7922759	535	5041	335	0.9932553064868082	+	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	2872	21	4951	10	16	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8079060-8079487	Cluster_4037	Pocillopora_meandrina_HIv1___Sc0000012	8079060	8079487	428	234	90	0.1282051282051282	-	UAUGACCGUUUGAAUCAGCCCAUGUACG	65	34	190	6	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8302325-8302754	Cluster_4038	Pocillopora_meandrina_HIv1___Sc0000012	8302325	8302754	430	102	26	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	34	1	100	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8477055-8477461	Cluster_4039	Pocillopora_meandrina_HIv1___Sc0000012	8477055	8477461	407	170	141	0.0058823529411764705	-	CGACUAGUGUGAGUA	4	68	56	11	10	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8490105-8490521	Cluster_4040	Pocillopora_meandrina_HIv1___Sc0000012	8490105	8490521	417	1568	114	0.001913265306122449	-	ACAACUUUUGACGGC	753	1505	22	6	22	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8592535-8592955	Cluster_4041	Pocillopora_meandrina_HIv1___Sc0000012	8592535	8592955	421	119	71	0.04201680672268908	-	AAUGGGAAAACGAGGACAGCGUGA	13	5	78	1	1	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8593071-8593822	Cluster_4042	Pocillopora_meandrina_HIv1___Sc0000012	8593071	8593822	752	3484	305	0.008323765786452353	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	1237	11	3367	0	3	29	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8627598-8628014	Cluster_4043	Pocillopora_meandrina_HIv1___Sc0000012	8627598	8628014	417	153	18	0.0	-	UUUGACAACUUUUGACA	67	150	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8669892-8670345	Cluster_4044	Pocillopora_meandrina_HIv1___Sc0000012	8669892	8670345	454	221	106	0.9547511312217195	+	UGAGAGAGCUGCUGAGUGCAAAAAGUACUUC	48	15	200	2	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8678382-8678809	Cluster_4045	Pocillopora_meandrina_HIv1___Sc0000012	8678382	8678809	428	157	75	1.0	+	UGCUACAAAAAAGGACGUGUUGAGCAGGC	22	1	155	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8680468-8680894	Cluster_4046	Pocillopora_meandrina_HIv1___Sc0000012	8680468	8680894	427	260	129	0.9884615384615385	+	UGCUCUUGUCUUGGAUGUAAGUGCCUAACA	27	4	252	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8684119-8684548	Cluster_4047	Pocillopora_meandrina_HIv1___Sc0000012	8684119	8684548	430	325	109	0.9938461538461538	+	UGACAUCGACAUAAGACAUAGAAAAAUGCG	83	2	313	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8702728-8703537	Cluster_4048	Pocillopora_meandrina_HIv1___Sc0000012	8702728	8703537	810	1570	264	0.9974522292993631	+	UACAUAGCCUUGAGGGUUGCAUUGCUCCACA	339	18	1485	2	1	57	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8706676-8707249	Cluster_4049	Pocillopora_meandrina_HIv1___Sc0000012	8706676	8707249	574	39410	587	0.9975894443034763	+	UUGUCUACAAGAAGCCUGUCCAUUUUGU	26223	106	38914	17	43	50	280	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8707330-8707984	Cluster_4050	Pocillopora_meandrina_HIv1___Sc0000012	8707330	8707984	655	1881	408	0.9776714513556619	+	UUUUCCCAUUGAACUACAAUAAAACCCAUC	189	93	1720	25	10	13	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8709379-8709804	Cluster_4051	Pocillopora_meandrina_HIv1___Sc0000012	8709379	8709804	426	185	81	0.9945945945945946	+	UGUUGAUUGCUUGACCACUGAGUUGA	50	2	164	7	0	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8715359-8715786	Cluster_4052	Pocillopora_meandrina_HIv1___Sc0000012	8715359	8715786	428	81	26	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	23	0	80	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8718444-8718866	Cluster_4053	Pocillopora_meandrina_HIv1___Sc0000012	8718444	8718866	423	231	138	0.8787878787878788	+	UACUGAUAGUGAAACUGCUCCUUGAACCUC	10	1	219	1	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8718887-8719317	Cluster_4054	Pocillopora_meandrina_HIv1___Sc0000012	8718887	8719317	431	297	134	0.9629629629629629	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	19	2	290	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8721579-8722738	Cluster_4055	Pocillopora_meandrina_HIv1___Sc0000012	8721579	8722738	1160	3152	986	0.48064720812182743	.	UGCAUUAUGUCAAAUUUAGAUUCAUCU	209	56	2819	19	28	79	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8726442-8727516	Cluster_4056	Pocillopora_meandrina_HIv1___Sc0000012	8726442	8727516	1075	3800	900	0.8821052631578947	+	UUGGUAACAGUGUGGUGGAGAACGUGAUU	136	38	3586	26	24	50	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8729518-8730305	Cluster_4057	Pocillopora_meandrina_HIv1___Sc0000012	8729518	8730305	788	394	156	0.9796954314720813	+	UCGGUAACUAAACGGUCAAAAUUAUACUUU	76	1	379	2	1	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8731310-8731727	Cluster_4058	Pocillopora_meandrina_HIv1___Sc0000012	8731310	8731727	418	108	38	0.9907407407407407	+	UGAUCUUUGCAAUGACGUUGUGACUGAAAA	22	5	100	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8749756-8750172	Cluster_4059	Pocillopora_meandrina_HIv1___Sc0000012	8749756	8750172	417	1014	26	0.02465483234714004	-	AUGUACAAUUCUAGACU	915	990	24	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8752386-8752974	Cluster_4060	Pocillopora_meandrina_HIv1___Sc0000012	8752386	8752974	589	6868	581	0.6646767617938264	.	UACGUCUGGCCAGCAAUCAACAUCGUC	1472	219	5652	93	26	50	828	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8753728-8754289	Cluster_4061	Pocillopora_meandrina_HIv1___Sc0000012	8753728	8754289	562	369	97	0.989159891598916	+	UAGGUAGUAACGACUGAAAAAAUUCCCU	46	33	324	4	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8759693-8760122	Cluster_4062	Pocillopora_meandrina_HIv1___Sc0000012	8759693	8760122	430	284	112	0.9964788732394366	+	UGAGCAAGUAACAAAAUCGUUUUGUGGAUU	70	3	269	0	5	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8760474-8760900	Cluster_4063	Pocillopora_meandrina_HIv1___Sc0000012	8760474	8760900	427	340	88	0.8441176470588235	+	UCUGUUUCCAUUGUAUUGAGAGUCUCA	157	7	328	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8762437-8762904	Cluster_4064	Pocillopora_meandrina_HIv1___Sc0000012	8762437	8762904	468	708	228	0.8389830508474576	+	UCUUUCGAUCUUCGUCAAACGAACCCGUU	214	107	520	51	19	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8769961-8770387	Cluster_4065	Pocillopora_meandrina_HIv1___Sc0000012	8769961	8770387	427	222	107	0.9504504504504504	+	UGAUUCAUCAGUAUUAAUGACUGUAGU	52	5	202	0	1	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8771988-8772496	Cluster_4066	Pocillopora_meandrina_HIv1___Sc0000012	8771988	8772496	509	576	230	0.7083333333333334	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	60	14	522	2	2	16	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8783229-8784508	Cluster_4067	Pocillopora_meandrina_HIv1___Sc0000012	8783229	8784508	1280	3753	1376	0.31681321609379165	.	UAAUGACACAGUCUGGAUAGAAGGAUU	148	89	3244	52	31	72	265	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8785069-8786838	Cluster_4068	Pocillopora_meandrina_HIv1___Sc0000012	8785069	8786838	1770	3132	1219	0.7541507024265645	.	AGGUGUAGAAUGUAAAAAGCAGCU	122	46	2661	24	29	85	287	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8791402-8791822	Cluster_4069	Pocillopora_meandrina_HIv1___Sc0000012	8791402	8791822	421	7341	217	0.034191527039912815	-	GAAUCGGCCGUGGAC	2739	7088	242	0	2	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8806213-8807054	Cluster_4070	Pocillopora_meandrina_HIv1___Sc0000012	8806213	8807054	842	3147	794	0.8798856053384175	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	345	17	2983	15	10	28	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8807244-8810040	Cluster_4071	Pocillopora_meandrina_HIv1___Sc0000012	8807244	8810040	2797	13802	2917	0.8663237211998261	+	UGAUCGAUAGUUUCGCUCUGGAGUUGUG	935	141	12953	46	63	216	383	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8827931-8828910	Cluster_4072	Pocillopora_meandrina_HIv1___Sc0000012	8827931	8828910	980	1263	224	0.9889152810768013	+	UGUCACACUUUGAACACACAAAAAAGGA	303	139	1077	9	8	1	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8840948-8841362	Cluster_4073	Pocillopora_meandrina_HIv1___Sc0000012	8840948	8841362	415	258	23	0.09689922480620156	-	GAAUCGGCCGUGGCU	219	233	25	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9075476-9076776	Cluster_4074	Pocillopora_meandrina_HIv1___Sc0000012	9075476	9076776	1301	1364	597	0.9824046920821115	+	UGCUUUCUGUUCUCUUGUUCUCCAACAAA	68	10	1315	8	8	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9076970-9077377	Cluster_4075	Pocillopora_meandrina_HIv1___Sc0000012	9076970	9077377	408	173	99	0.3236994219653179	.	UGUAUCCAGUAAUGGCGAUUUCGUCGUC	19	2	137	2	2	3	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9077772-9078199	Cluster_4076	Pocillopora_meandrina_HIv1___Sc0000012	9077772	9078199	428	224	96	0.03125	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	48	0	220	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9079951-9081502	Cluster_4077	Pocillopora_meandrina_HIv1___Sc0000012	9079951	9081502	1552	10773	1854	0.9844982827438967	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1251	96	10350	30	42	80	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9092664-9093073	Cluster_4078	Pocillopora_meandrina_HIv1___Sc0000012	9092664	9093073	410	84	26	0.6071428571428571	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	27	2	81	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9102736-9104307	Cluster_4079	Pocillopora_meandrina_HIv1___Sc0000012	9102736	9104307	1572	2211	944	0.9317051108095884	+	UAGGAUCAUAGUCUUUGAACUCCGACGG	72	19	2008	13	11	93	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9104863-9105713	Cluster_4080	Pocillopora_meandrina_HIv1___Sc0000012	9104863	9105713	851	1552	508	0.8936855670103093	+	UGAUUUAUAGGAGUAAUGAGACAUUAU	144	29	1420	16	32	10	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9109032-9110534	Cluster_4081	Pocillopora_meandrina_HIv1___Sc0000012	9109032	9110534	1503	1622	725	0.9574599260172626	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	50	20	1500	8	22	26	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9110815-9111244	Cluster_4082	Pocillopora_meandrina_HIv1___Sc0000012	9110815	9111244	430	679	193	0.9926362297496318	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	165	3	670	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9111593-9112012	Cluster_4083	Pocillopora_meandrina_HIv1___Sc0000012	9111593	9112012	420	171	100	0.8771929824561403	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	22	0	155	1	2	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9112220-9113011	Cluster_4084	Pocillopora_meandrina_HIv1___Sc0000012	9112220	9113011	792	1049	429	0.786463298379409	.	UCCUCGGUCUGAUGCAUCACACUGCAAUU	36	34	868	8	12	70	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9113299-9113734	Cluster_4085	Pocillopora_meandrina_HIv1___Sc0000012	9113299	9113734	436	216	93	0.9629629629629629	+	UACAGACUUAUCAAUCUCGAGGUGAAGC	35	0	204	1	2	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9114316-9114857	Cluster_4086	Pocillopora_meandrina_HIv1___Sc0000012	9114316	9114857	542	840	363	0.7964285714285714	.	UCUAUCACUUUGUCGAUGUCGGUUUUCU	32	53	679	10	11	20	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9116932-9118951	Cluster_4087	Pocillopora_meandrina_HIv1___Sc0000012	9116932	9118951	2020	3095	1242	0.965751211631664	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	92	24	2936	13	25	33	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9119216-9120301	Cluster_4088	Pocillopora_meandrina_HIv1___Sc0000012	9119216	9120301	1086	6042	598	0.9193975504799735	+	UCAUAGAGUUUAAGACAAGCCCAACAGGUC	2355	116	5681	36	111	40	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9126646-9127053	Cluster_4089	Pocillopora_meandrina_HIv1___Sc0000012	9126646	9127053	408	246	134	0.9715447154471545	+	UCUCUAACUCGUCGUCUGCUUCAUCAGC	23	13	225	3	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9127123-9127835	Cluster_4090	Pocillopora_meandrina_HIv1___Sc0000012	9127123	9127835	713	981	191	0.9908256880733946	+	UUAUAACCGAGUGUGCCUUAUAACCGAAU	183	7	967	0	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9144222-9144638	Cluster_4091	Pocillopora_meandrina_HIv1___Sc0000012	9144222	9144638	417	138	27	0.9927536231884058	+	CCAUCCUCGUCGCCA	28	131	5	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9153751-9154827	Cluster_4092	Pocillopora_meandrina_HIv1___Sc0000012	9153751	9154827	1077	4895	1072	0.9090909090909091	+	UCAUCGACAUGCCUUGACUUUGAGCAGU	639	81	4633	23	18	47	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9192779-9193208	Cluster_4093	Pocillopora_meandrina_HIv1___Sc0000012	9192779	9193208	430	306	84	0.0032679738562091504	-	UACUCCGACACUCCGAUAUGUGAUACUAC	72	4	299	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9263570-9263985	Cluster_4094	Pocillopora_meandrina_HIv1___Sc0000012	9263570	9263985	416	94	9	1.0	+	UUACAUCGUGUCUUUU	45	94	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9311500-9311918	Cluster_4095	Pocillopora_meandrina_HIv1___Sc0000012	9311500	9311918	419	159	93	0.025157232704402517	-	CCCAAACUGUAUGUGAAGCUUCA	25	64	25	8	14	35	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9312883-9313417	Cluster_4096	Pocillopora_meandrina_HIv1___Sc0000012	9312883	9313417	535	356	186	0.0	-	AAUAUUGUGGAGGCAGCUGCA	15	155	79	36	19	38	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9331990-9332405	Cluster_4097	Pocillopora_meandrina_HIv1___Sc0000012	9331990	9332405	416	79	5	1.0	+	GGUAAAUAAUUCGGACU	67	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9393358-9393772	Cluster_4098	Pocillopora_meandrina_HIv1___Sc0000012	9393358	9393772	415	121	19	0.8925619834710744	+	AUCUCUAGGCUCACA	81	114	5	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9416464-9416881	Cluster_4099	Pocillopora_meandrina_HIv1___Sc0000012	9416464	9416881	418	887	82	1.0	+	UGGGUGGCGUUUUCUU	229	881	2	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9496538-9497031	Cluster_4100	Pocillopora_meandrina_HIv1___Sc0000012	9496538	9497031	494	228	38	0.5789473684210527	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	78	1	227	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9751542-9751967	Cluster_4101	Pocillopora_meandrina_HIv1___Sc0000012	9751542	9751967	426	81	27	0.9629629629629629	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	26	0	78	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9767406-9767836	Cluster_4102	Pocillopora_meandrina_HIv1___Sc0000012	9767406	9767836	431	1176	92	0.013605442176870748	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	413	1	1174	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9772163-9772580	Cluster_4103	Pocillopora_meandrina_HIv1___Sc0000012	9772163	9772580	418	111	15	1.0	+	AUCCCACUCCUGACACCA	39	108	0	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9778224-9778651	Cluster_4104	Pocillopora_meandrina_HIv1___Sc0000012	9778224	9778651	428	128	24	0.984375	+	UUCCUGCAAUGGUUUGUGCAUCGUCUGGC	29	1	127	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9808305-9808728	Cluster_4105	Pocillopora_meandrina_HIv1___Sc0000012	9808305	9808728	424	88	25	0.03409090909090909	-	UGACUUUAUUUGCGUCACGGAUUAGCUGGC	22	0	88	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9831019-9831444	Cluster_4106	Pocillopora_meandrina_HIv1___Sc0000012	9831019	9831444	426	193	94	0.9740932642487047	+	UCUGUCUCUACGUCGGUGCAAACCAUGCGC	16	9	179	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9836384-9836811	Cluster_4107	Pocillopora_meandrina_HIv1___Sc0000012	9836384	9836811	428	304	128	0.756578947368421	.	UCGAUCAGGAGAUACAGAGGGAGCUGAGA	27	11	229	0	13	15	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9922141-9922628	Cluster_4108	Pocillopora_meandrina_HIv1___Sc0000012	9922141	9922628	488	655	214	0.7221374045801526	.	CGGCUGCUCAGUAAUUUUCGAUGGGAGU	79	12	576	12	9	17	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9958130-9958557	Cluster_4109	Pocillopora_meandrina_HIv1___Sc0000012	9958130	9958557	428	188	71	0.14893617021276595	-	AACUGAUAGAGCUGCUACACCUGGAAGC	69	19	133	13	13	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9964596-9965200	Cluster_4110	Pocillopora_meandrina_HIv1___Sc0000012	9964596	9965200	605	6569	305	0.0013700715481808495	-	UACUGAACUGGCUAACAUUUGUACAAAAUC	3411	46	6210	4	37	17	255	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9965344-9965831	Cluster_4111	Pocillopora_meandrina_HIv1___Sc0000012	9965344	9965831	488	495	126	0.0	-	UGUUCUCUGUCUCUUCACCACCAUUUGCAG	66	9	476	1	4	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9966705-9967134	Cluster_4112	Pocillopora_meandrina_HIv1___Sc0000012	9966705	9967134	430	468	134	0.07905982905982906	-	UUUGCUCUCCAUUCUGCCAGUAGGCCA	51	48	405	8	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:46261-46675	Cluster_4113	Pocillopora_meandrina_HIv1___Sc0000013	46261	46675	415	167	10	1.0	+	CUUUCCGAGGUCGGG	142	167	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:247172-247662	Cluster_4114	Pocillopora_meandrina_HIv1___Sc0000013	247172	247662	491	618	280	0.29449838187702265	.	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	22	51	435	9	19	37	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:249635-250052	Cluster_4115	Pocillopora_meandrina_HIv1___Sc0000013	249635	250052	418	135	64	0.9185185185185185	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	17	1	122	3	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:250128-250670	Cluster_4116	Pocillopora_meandrina_HIv1___Sc0000013	250128	250670	543	315	158	0.8952380952380953	+	UGAGGACAGAUCUAAUGUACUGAAAAGCGUU	42	3	298	1	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:250823-251251	Cluster_4117	Pocillopora_meandrina_HIv1___Sc0000013	250823	251251	429	193	75	0.9430051813471503	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	29	2	186	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:251265-252162	Cluster_4118	Pocillopora_meandrina_HIv1___Sc0000013	251265	252162	898	909	391	0.8657865786578658	+	UCUACGUCUUUCGCUUGUUUUUCACUGAGU	39	3	839	3	5	19	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:347884-350364	Cluster_4119	Pocillopora_meandrina_HIv1___Sc0000013	347884	350364	2481	5018	1642	0.9294539657233958	+	UCCGAGACUGUAGAUCCGAGUUGAUCCA	181	42	4684	22	32	81	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:474790-475215	Cluster_4120	Pocillopora_meandrina_HIv1___Sc0000013	474790	475215	426	150	57	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	20	1	146	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:560422-560849	Cluster_4121	Pocillopora_meandrina_HIv1___Sc0000013	560422	560849	428	453	51	1.0	+	UAAUCGUUGGCUUUUUCUCGAGGCGGG	161	0	453	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:742806-743234	Cluster_4122	Pocillopora_meandrina_HIv1___Sc0000013	742806	743234	429	450	118	0.9555555555555556	+	UGUAGAAUCAAUCUGUUACUAAGACACC	98	4	416	15	0	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:743992-744451	Cluster_4123	Pocillopora_meandrina_HIv1___Sc0000013	743992	744451	460	1608	483	0.8351990049751243	+	UCUGAUUUCGGUAUUGAUCCAGGGAAGUG	77	15	1454	15	21	30	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:744782-746779	Cluster_4124	Pocillopora_meandrina_HIv1___Sc0000013	744782	746779	1998	5359	1642	0.10375069975741742	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	343	67	5015	24	33	66	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:746786-747213	Cluster_4125	Pocillopora_meandrina_HIv1___Sc0000013	746786	747213	428	345	161	0.10434782608695652	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	56	1	326	1	1	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:747331-747757	Cluster_4126	Pocillopora_meandrina_HIv1___Sc0000013	747331	747757	427	172	87	0.06395348837209303	-	UGAACUUCUCGGCUCCAAACACUAUGG	37	0	164	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:747773-748277	Cluster_4127	Pocillopora_meandrina_HIv1___Sc0000013	747773	748277	505	717	293	0.1087866108786611	-	UAAUUCCAUCUUGCGCUGAUAGCUCGU	55	13	643	6	7	17	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:748490-749664	Cluster_4128	Pocillopora_meandrina_HIv1___Sc0000013	748490	749664	1175	1210	470	0.05454545454545454	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	92	19	1081	3	25	29	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:922124-922918	Cluster_4129	Pocillopora_meandrina_HIv1___Sc0000013	922124	922918	795	257	106	0.9571984435797666	+	UGAAUUUCUGAAGUGUGUUACUGUGGUA	35	3	237	1	0	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:951699-952118	Cluster_4130	Pocillopora_meandrina_HIv1___Sc0000013	951699	952118	420	222	44	0.13513513513513514	-	GGUUGGGUCCGGCCCGGA	21	222	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1208342-1208772	Cluster_4131	Pocillopora_meandrina_HIv1___Sc0000013	1208342	1208772	431	358	66	0.9832402234636871	+	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	111	2	349	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1574802-1575213	Cluster_4132	Pocillopora_meandrina_HIv1___Sc0000013	1574802	1575213	412	171	114	0.783625730994152	.	UGUAAGACGCACUCUACUCUGUUGU	10	11	141	3	2	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1671541-1672316	Cluster_4133	Pocillopora_meandrina_HIv1___Sc0000013	1671541	1672316	776	254	44	0.968503937007874	+	UUGGACUGUGCAUAACCAUUUGC	115	5	100	3	4	137	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1700378-1701707	Cluster_4134	Pocillopora_meandrina_HIv1___Sc0000013	1700378	1701707	1330	6242	1575	0.6086190323614227	.	AAGCAGAAGAAGAUCUUGGUGACA	668	100	4295	32	172	259	1384	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1702167-1702858	Cluster_4135	Pocillopora_meandrina_HIv1___Sc0000013	1702167	1702858	692	1004	362	0.045816733067729085	-	UGUUCCUUGAAUUCUGCGUGCACAAAGC	204	13	938	3	7	10	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1702993-1704978	Cluster_4136	Pocillopora_meandrina_HIv1___Sc0000013	1702993	1704978	1986	2813	1215	0.07074297902595095	-	UGAUAACUUGCUAUCGAUCGCGGUACU	85	67	2589	32	23	37	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1705054-1705652	Cluster_4137	Pocillopora_meandrina_HIv1___Sc0000013	1705054	1705652	599	1673	703	0.1470412432755529	-	UAGGUUGGAACUUGCUCACUGUGUGCG	61	49	1394	29	23	87	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1714412-1714827	Cluster_4138	Pocillopora_meandrina_HIv1___Sc0000013	1714412	1714827	416	284	189	0.8767605633802817	+	UCUAUAUUACAAAAUAAAUUGUGGGACGUA	16	96	121	32	19	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1870052-1870651	Cluster_4139	Pocillopora_meandrina_HIv1___Sc0000013	1870052	1870651	600	482	145	0.05394190871369295	-	UGAUCAAGUUUCCUAUCGCCUGUAAACA	79	6	460	1	4	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1924250-1925026	Cluster_4140	Pocillopora_meandrina_HIv1___Sc0000013	1924250	1925026	777	226	32	0.9823008849557522	+	UUGGACUGUGCAUAACCAUUUGC	106	2	88	0	3	129	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2014873-2016820	Cluster_4141	Pocillopora_meandrina_HIv1___Sc0000013	2014873	2016820	1948	3094	1017	0.2475759534583064	.	UGAUACGAGUAGUUGGAUACAAUCUAAACU	337	43	2781	14	25	55	176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2017861-2019125	Cluster_4142	Pocillopora_meandrina_HIv1___Sc0000013	2017861	2019125	1265	1319	538	0.7808946171341926	.	UGUAACUGGUUCACUGCGAUUUUGUAGU	88	17	1146	13	10	44	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2019206-2019650	Cluster_4143	Pocillopora_meandrina_HIv1___Sc0000013	2019206	2019650	445	873	253	0.8327605956471936	+	UGAUAUGACCUUCGGCAAAAAACUGGA	110	4	763	5	4	22	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2586733-2587160	Cluster_4144	Pocillopora_meandrina_HIv1___Sc0000013	2586733	2587160	428	178	68	0.016853932584269662	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	10	159	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2639722-2640750	Cluster_4145	Pocillopora_meandrina_HIv1___Sc0000013	2639722	2640750	1029	2338	627	0.981180496150556	+	UCGGAUUACGCACGAUCACACGUGUCGAGC	96	13	2261	8	10	18	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2641296-2642053	Cluster_4146	Pocillopora_meandrina_HIv1___Sc0000013	2641296	2642053	758	722	344	0.9570637119113573	+	UGCGUUCCUGAAGCAACUUUUGCCUC	53	17	671	8	4	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2949721-2950122	Cluster_4147	Pocillopora_meandrina_HIv1___Sc0000013	2949721	2950122	402	129	75	0.06201550387596899	-	UGUAAUCAUACGCUUAGCCUCAGUGAACGCU	11	2	117	1	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2950203-2950629	Cluster_4148	Pocillopora_meandrina_HIv1___Sc0000013	2950203	2950629	427	355	173	0.01971830985915493	-	UAGGUAAUGGCACAAACUGAGAGGCGU	29	5	345	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2953747-2954523	Cluster_4149	Pocillopora_meandrina_HIv1___Sc0000013	2953747	2954523	777	223	20	0.9955156950672646	+	UUGGACUGUGCAUAACCAUUUGC	109	0	77	0	6	135	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3143644-3144540	Cluster_4150	Pocillopora_meandrina_HIv1___Sc0000013	3143644	3144540	897	1817	557	0.10016510731975785	-	UAAUAGCGACUUUCAACUUCGUGUUUGUC	179	36	1677	18	30	20	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3145050-3146621	Cluster_4151	Pocillopora_meandrina_HIv1___Sc0000013	3145050	3146621	1572	2249	1030	0.07514450867052024	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	81	27	2049	6	17	87	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3236496-3236922	Cluster_4152	Pocillopora_meandrina_HIv1___Sc0000013	3236496	3236922	427	143	56	0.013986013986013986	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	0	137	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3300861-3301290	Cluster_4153	Pocillopora_meandrina_HIv1___Sc0000013	3300861	3301290	430	663	155	0.9834087481146304	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	143	1	650	3	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3301411-3301941	Cluster_4154	Pocillopora_meandrina_HIv1___Sc0000013	3301411	3301941	531	620	249	0.9983870967741936	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	24	3	607	2	0	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3303861-3304796	Cluster_4155	Pocillopora_meandrina_HIv1___Sc0000013	3303861	3304796	936	523	258	0.9177820267686424	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	33	7	477	4	4	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3304810-3305374	Cluster_4156	Pocillopora_meandrina_HIv1___Sc0000013	3304810	3305374	565	3545	703	0.9768688293370945	+	UGAUUUGUACGACCCACUCCUGUUAAC	347	282	3106	11	32	35	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3318565-3319049	Cluster_4157	Pocillopora_meandrina_HIv1___Sc0000013	3318565	3319049	485	466	278	0.20600858369098712	.	UGAAUUUCGAUCUGCAGACUCUCGGUA	14	6	403	5	4	6	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3319169-3320238	Cluster_4158	Pocillopora_meandrina_HIv1___Sc0000013	3319169	3320238	1070	3264	944	0.05269607843137255	-	UAUUGAUCUUACAGGCUCCGCAGCGGUU	180	45	3071	24	15	28	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3320299-3321342	Cluster_4159	Pocillopora_meandrina_HIv1___Sc0000013	3320299	3321342	1044	987	400	0.04660587639311044	-	UAUAGUUCUUCUGUACUGGCUCAUUGUC	62	10	932	5	10	15	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3322347-3322772	Cluster_4160	Pocillopora_meandrina_HIv1___Sc0000013	3322347	3322772	426	236	138	0.03389830508474576	-	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	27	3	215	3	3	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3322993-3324524	Cluster_4161	Pocillopora_meandrina_HIv1___Sc0000013	3322993	3324524	1532	1462	570	0.019835841313269494	-	UGAGACUCUCUUGUUGUAAUAUUGCUUG	81	14	1397	7	8	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3417712-3418164	Cluster_4162	Pocillopora_meandrina_HIv1___Sc0000013	3417712	3418164	453	245	90	0.9836734693877551	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	23	0	239	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3418321-3418748	Cluster_4163	Pocillopora_meandrina_HIv1___Sc0000013	3418321	3418748	428	328	180	0.8262195121951219	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	21	3	287	0	4	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3419082-3421489	Cluster_4164	Pocillopora_meandrina_HIv1___Sc0000013	3419082	3421489	2408	4108	1327	0.9342745861733204	+	UGUACAACCAUCCGAUACUCUUGU	678	43	2868	24	18	73	1082	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3421692-3422943	Cluster_4165	Pocillopora_meandrina_HIv1___Sc0000013	3421692	3422943	1252	1620	703	0.8160493827160494	+	CUUUCCGAGGUCGCGA	88	180	1330	8	17	16	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3423879-3424975	Cluster_4166	Pocillopora_meandrina_HIv1___Sc0000013	3423879	3424975	1097	1380	571	0.8652173913043478	+	UACAAUAACCUCUGAUUUCACUAAAUG	68	19	1254	6	10	30	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3639403-3640179	Cluster_4167	Pocillopora_meandrina_HIv1___Sc0000013	3639403	3640179	777	400	59	0.9925	+	UUGGACUGUGCAUAACCAUUUGC	117	0	249	1	5	135	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3889072-3889784	Cluster_4168	Pocillopora_meandrina_HIv1___Sc0000013	3889072	3889784	713	327	173	0.0581039755351682	-	UGUGGUUACGCCCUUCAAGUGAGAAAACUGA	30	2	317	1	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3890553-3890979	Cluster_4169	Pocillopora_meandrina_HIv1___Sc0000013	3890553	3890979	427	124	48	0.024193548387096774	-	UGUGUGUAAGUCGAUUGAUAAUAUCUUC	26	2	112	0	0	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3905243-3905657	Cluster_4170	Pocillopora_meandrina_HIv1___Sc0000013	3905243	3905657	415	254	6	1.0	+	AACUUUUGACGGUGU	249	254	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4059763-4060360	Cluster_4171	Pocillopora_meandrina_HIv1___Sc0000013	4059763	4060360	598	962	330	0.9937629937629938	+	UGUUCUUCUUGACUCUGACGAUCUUCAAC	101	11	939	1	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4060437-4061315	Cluster_4172	Pocillopora_meandrina_HIv1___Sc0000013	4060437	4061315	879	947	394	0.989440337909187	+	UGCUGAAACGAUUUUGACAGGUUGUCA	61	7	900	2	4	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4061438-4062543	Cluster_4173	Pocillopora_meandrina_HIv1___Sc0000013	4061438	4062543	1106	1339	544	0.9932785660941	+	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	89	17	1292	4	1	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4063029-4063457	Cluster_4174	Pocillopora_meandrina_HIv1___Sc0000013	4063029	4063457	429	477	178	1.0	+	UACAAAGCUCUCACGAAUUCACAAACAGA	51	1	475	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4081126-4081571	Cluster_4175	Pocillopora_meandrina_HIv1___Sc0000013	4081126	4081571	446	545	76	0.7339449541284404	.	UCGUUUAGAUCAGAGAUCACCUCAACU	196	0	534	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4113474-4113898	Cluster_4176	Pocillopora_meandrina_HIv1___Sc0000013	4113474	4113898	425	85	36	0.9764705882352941	+	UGUGUAGAUAUGUCUUUUGGACAGGA	29	0	83	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4115225-4115645	Cluster_4177	Pocillopora_meandrina_HIv1___Sc0000013	4115225	4115645	421	163	87	0.8711656441717791	+	UAAAAUGACUGUUUCCGAUGUUCCCU	12	1	149	0	7	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4150193-4150672	Cluster_4178	Pocillopora_meandrina_HIv1___Sc0000013	4150193	4150672	480	1749	207	0.9982847341337907	+	UGGACAAAUUCAUAGGUCUGAUGCAAAC	263	38	1690	2	6	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4150722-4151147	Cluster_4179	Pocillopora_meandrina_HIv1___Sc0000013	4150722	4151147	426	192	65	0.9375	+	UAAGACCCAUCCAUCACUAUCAACUCG	25	2	186	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4151796-4152224	Cluster_4180	Pocillopora_meandrina_HIv1___Sc0000013	4151796	4152224	429	193	34	0.9844559585492227	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	82	0	193	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4157440-4157851	Cluster_4181	Pocillopora_meandrina_HIv1___Sc0000013	4157440	4157851	412	119	38	0.5042016806722689	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	30	0	114	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4160208-4160634	Cluster_4182	Pocillopora_meandrina_HIv1___Sc0000013	4160208	4160634	427	173	63	0.7976878612716763	.	UGUCAAAUUCUCGUCUUCCUAACCUUU	69	0	169	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4178112-4178583	Cluster_4183	Pocillopora_meandrina_HIv1___Sc0000013	4178112	4178583	472	475	164	0.10947368421052632	-	UUAAACCGACUCACAGUCCGAUUCGAAU	98	3	438	1	2	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4189325-4190082	Cluster_4184	Pocillopora_meandrina_HIv1___Sc0000013	4189325	4190082	758	533	272	0.0825515947467167	-	UAGGUAAUGGCACAAACUGAGAGGCGU	26	7	497	4	4	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4192997-4193773	Cluster_4185	Pocillopora_meandrina_HIv1___Sc0000013	4192997	4193773	777	240	21	0.9958333333333333	+	UUGGACUGUGCAUAACCAUUUGC	134	0	80	0	7	151	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4470522-4471298	Cluster_4186	Pocillopora_meandrina_HIv1___Sc0000013	4470522	4471298	777	240	31	0.9916666666666667	+	UUGGACUGUGCAUAACCAUUUGC	108	0	98	0	3	130	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4504525-4504942	Cluster_4187	Pocillopora_meandrina_HIv1___Sc0000013	4504525	4504942	418	214	4	1.0	+	UGGCCUGAAAAAAAAAAA	167	214	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4609215-4609720	Cluster_4188	Pocillopora_meandrina_HIv1___Sc0000013	4609215	4609720	506	370	137	0.5675675675675675	.	AAGGAUACCACAUUCGGAAGUGUAAGAGA	57	19	328	5	1	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4609804-4610233	Cluster_4189	Pocillopora_meandrina_HIv1___Sc0000013	4609804	4610233	430	327	129	0.9755351681957186	+	UGGGAAAACGAGAAUAGCGUGAGU	19	11	233	7	3	15	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4811422-4811847	Cluster_4190	Pocillopora_meandrina_HIv1___Sc0000013	4811422	4811847	426	158	80	0.27848101265822783	.	UGUCGACCGCAACCGCAAGCUUUCCGAGU	22	10	143	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4816169-4816691	Cluster_4191	Pocillopora_meandrina_HIv1___Sc0000013	4816169	4816691	523	366	117	0.7349726775956285	.	UACGUAUCAAUACAGACACUUUCGUUCA	121	17	324	2	9	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4839370-4839782	Cluster_4192	Pocillopora_meandrina_HIv1___Sc0000013	4839370	4839782	413	83	22	0.963855421686747	+	GCCGUGCUGGCUGACU	17	80	2	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4860236-4860664	Cluster_4193	Pocillopora_meandrina_HIv1___Sc0000013	4860236	4860664	429	183	58	0.8852459016393442	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	65	1	171	0	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5103387-5104123	Cluster_4194	Pocillopora_meandrina_HIv1___Sc0000013	5103387	5104123	737	3976	629	0.9781187122736419	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	754	23	3882	5	7	17	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5105250-5106448	Cluster_4195	Pocillopora_meandrina_HIv1___Sc0000013	5105250	5106448	1199	2713	873	0.8252856616291928	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	97	39	2453	22	26	42	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5107643-5109614	Cluster_4196	Pocillopora_meandrina_HIv1___Sc0000013	5107643	5109614	1972	5647	1549	0.9392597839560829	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	468	49	5381	21	21	62	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5110255-5110678	Cluster_4197	Pocillopora_meandrina_HIv1___Sc0000013	5110255	5110678	424	261	126	0.9808429118773946	+	UUAUAUAUUAAAUCUGCUUGAAUGAUCGC	15	3	239	3	2	0	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5111128-5111556	Cluster_4198	Pocillopora_meandrina_HIv1___Sc0000013	5111128	5111556	429	580	58	1.0	+	UGUGAGUUGAUGUUUGGUGGGAUACCU	188	6	569	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5111652-5112680	Cluster_4199	Pocillopora_meandrina_HIv1___Sc0000013	5111652	5112680	1029	4297	923	0.8910868047474982	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	474	65	4004	16	18	65	129	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5112751-5113300	Cluster_4200	Pocillopora_meandrina_HIv1___Sc0000013	5112751	5113300	550	4222	576	0.5952155376598768	.	ACAAGACAGAAUUCCAGCUGAUACAGA	504	58	3900	9	42	83	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5114630-5115060	Cluster_4201	Pocillopora_meandrina_HIv1___Sc0000013	5114630	5115060	431	919	102	0.018498367791077257	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	541	7	887	3	1	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5116587-5118347	Cluster_4202	Pocillopora_meandrina_HIv1___Sc0000013	5116587	5118347	1761	2163	745	0.2311604253351826	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	105	23	1984	5	8	38	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5118827-5119253	Cluster_4203	Pocillopora_meandrina_HIv1___Sc0000013	5118827	5119253	427	139	64	0.02877697841726619	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	24	5	132	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5119308-5120041	Cluster_4204	Pocillopora_meandrina_HIv1___Sc0000013	5119308	5120041	734	1144	313	0.062062937062937064	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	128	7	1087	3	4	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5193210-5194947	Cluster_4205	Pocillopora_meandrina_HIv1___Sc0000013	5193210	5194947	1738	2839	1131	0.04121169425854174	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	98	33	2692	8	25	39	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5199542-5200166	Cluster_4206	Pocillopora_meandrina_HIv1___Sc0000013	5199542	5200166	625	952	393	0.04411764705882353	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	30	9	903	6	6	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5200187-5200864	Cluster_4207	Pocillopora_meandrina_HIv1___Sc0000013	5200187	5200864	678	604	301	0.13245033112582782	-	UCAACUUUCUGGUAGUCUAACUGCUGUU	37	7	533	3	3	13	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5201147-5201590	Cluster_4208	Pocillopora_meandrina_HIv1___Sc0000013	5201147	5201590	444	678	188	0.014749262536873156	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	67	1	668	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5203239-5204089	Cluster_4209	Pocillopora_meandrina_HIv1___Sc0000013	5203239	5204089	851	1555	506	0.10803858520900321	-	UGAUUUAUAGGAGUAAUGAGACAUUAU	131	31	1412	33	22	16	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5204645-5206216	Cluster_4210	Pocillopora_meandrina_HIv1___Sc0000013	5204645	5206216	1572	2048	955	0.0849609375	-	UAUGAUAAAUACUUCUGCCUAGCUCCUGC	65	30	1836	9	9	87	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5206474-5207150	Cluster_4211	Pocillopora_meandrina_HIv1___Sc0000013	5206474	5207150	677	8015	549	0.004366812227074236	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2159	14	7875	4	50	34	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5207204-5208976	Cluster_4212	Pocillopora_meandrina_HIv1___Sc0000013	5207204	5208976	1773	9436	2455	0.07640949554896143	-	UGAUAGACUGCACGACGAUUUACGUCA	562	115	8534	68	78	280	361	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5216418-5216850	Cluster_4213	Pocillopora_meandrina_HIv1___Sc0000013	5216418	5216850	433	433	160	0.06697459584295612	-	UUGGUGUGUUCAAGUAUCUUUGAUUCUGA	40	6	415	2	1	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5219580-5219999	Cluster_4214	Pocillopora_meandrina_HIv1___Sc0000013	5219580	5219999	420	95	43	0.0	-	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	18	2	87	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5221124-5221549	Cluster_4215	Pocillopora_meandrina_HIv1___Sc0000013	5221124	5221549	426	139	50	0.28776978417266186	.	UGUACUUUCUUUGGGCCAUGUAAUCU	23	4	129	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5484731-5485161	Cluster_4216	Pocillopora_meandrina_HIv1___Sc0000013	5484731	5485161	431	204	40	0.9852941176470589	+	UGUGACUUUGUAUGUAUAUUGAGCGUAAUA	37	0	204	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5492193-5492621	Cluster_4217	Pocillopora_meandrina_HIv1___Sc0000013	5492193	5492621	429	185	95	0.08648648648648649	-	UGAACGUAUAGCCAUCCAGUUGAACUGG	12	1	180	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5492632-5493056	Cluster_4218	Pocillopora_meandrina_HIv1___Sc0000013	5492632	5493056	425	159	101	0.1949685534591195	-	UGACUUUAACACUAUAAACAUUCUGAGG	7	2	133	1	8	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5580444-5580871	Cluster_4219	Pocillopora_meandrina_HIv1___Sc0000013	5580444	5580871	428	104	28	0.04807692307692308	-	UGAACACGCUCUGAGAACUUGUUUUACG	42	1	101	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5586524-5587233	Cluster_4220	Pocillopora_meandrina_HIv1___Sc0000013	5586524	5587233	710	447	194	0.9574944071588367	+	UGUGUAGAUAUGUCUUUUGGACAGGA	27	8	421	4	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5587541-5588626	Cluster_4221	Pocillopora_meandrina_HIv1___Sc0000013	5587541	5588626	1086	3705	922	0.9786774628879892	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	132	46	3574	14	13	30	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5588764-5589334	Cluster_4222	Pocillopora_meandrina_HIv1___Sc0000013	5588764	5589334	571	437	180	0.9588100686498856	+	UGCAUUCUCAAGUCGUGCUCUGUAACGG	62	8	394	2	4	6	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5589521-5590010	Cluster_4223	Pocillopora_meandrina_HIv1___Sc0000013	5589521	5590010	490	638	214	0.9529780564263323	+	UGACGUGUCCUAGGUACUCCACAAAACU	60	19	577	1	10	13	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5590759-5592015	Cluster_4224	Pocillopora_meandrina_HIv1___Sc0000013	5590759	5592015	1257	1441	540	0.9736294240111034	+	UGAUUUGUACGACCCACUCCUGUUAAC	70	37	1351	7	10	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5595130-5595558	Cluster_4225	Pocillopora_meandrina_HIv1___Sc0000013	5595130	5595558	429	310	59	1.0	+	UGGGUUGAGUGAAUUUGUGAGGAAACUGA	130	12	284	3	4	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5595910-5596340	Cluster_4226	Pocillopora_meandrina_HIv1___Sc0000013	5595910	5596340	431	1062	132	0.9990583804143126	+	UUCAUUCUGUAAUCUUCUCUAAGUCUAGA	207	9	1048	3	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5596710-5597139	Cluster_4227	Pocillopora_meandrina_HIv1___Sc0000013	5596710	5597139	430	415	85	0.908433734939759	+	UGGACAAACAGUAACGUUACUAUUGCGGUU	133	7	402	1	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5735573-5736001	Cluster_4228	Pocillopora_meandrina_HIv1___Sc0000013	5735573	5736001	429	228	98	0.6491228070175439	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	67	19	196	5	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5934945-5935645	Cluster_4229	Pocillopora_meandrina_HIv1___Sc0000013	5934945	5935645	701	191	73	0.015706806282722512	-	UAUUUGCACCGUUUUUCUUGAAUAUAGA	21	1	186	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5936944-5937371	Cluster_4230	Pocillopora_meandrina_HIv1___Sc0000013	5936944	5937371	428	194	74	0.020618556701030927	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	42	4	185	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6078488-6078915	Cluster_4231	Pocillopora_meandrina_HIv1___Sc0000013	6078488	6078915	428	136	25	0.9852941176470589	+	GCACCAAUCAGAGCUGUUGAAAAACAACA	43	2	132	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6097077-6097495	Cluster_4232	Pocillopora_meandrina_HIv1___Sc0000013	6097077	6097495	419	1517	43	0.007251153592617007	-	AACUUGAAGCGGUUGGAU	1215	1509	4	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6168013-6168428	Cluster_4233	Pocillopora_meandrina_HIv1___Sc0000013	6168013	6168428	416	223	17	0.08071748878923767	-	GUGUUCUCGUACGACA	203	215	6	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6278312-6278738	Cluster_4234	Pocillopora_meandrina_HIv1___Sc0000013	6278312	6278738	427	133	70	0.3684210526315789	.	UAGUCUAUCUCUUAACGCGUCAUUCAAG	16	1	123	1	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6284962-6285389	Cluster_4235	Pocillopora_meandrina_HIv1___Sc0000013	6284962	6285389	428	128	52	0.0078125	-	UAAAGAACAAUUAAUUAUCUCUGCCACG	26	1	127	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6305354-6305781	Cluster_4236	Pocillopora_meandrina_HIv1___Sc0000013	6305354	6305781	428	101	20	0.0594059405940594	-	AACUACUGCUCGUGCUCUAGAUAUGACA	62	1	98	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6319583-6320179	Cluster_4237	Pocillopora_meandrina_HIv1___Sc0000013	6319583	6320179	597	5686	511	0.0022863172704889203	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	861	18	5627	5	7	5	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6440807-6441224	Cluster_4238	Pocillopora_meandrina_HIv1___Sc0000013	6440807	6441224	418	296	26	0.9966216216216216	+	GUCUGGAGUCUCGGCUU	80	296	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6764524-6764936	Cluster_4239	Pocillopora_meandrina_HIv1___Sc0000013	6764524	6764936	413	110	54	0.990909090909091	+	UGACGAUUUUCGCGGCUCGAUUUUGU	16	0	107	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6783144-6783548	Cluster_4240	Pocillopora_meandrina_HIv1___Sc0000013	6783144	6783548	405	186	81	0.8333333333333334	+	CGGGAUCGAAAAACUAAAUUUUU	10	3	160	0	0	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6788067-6789348	Cluster_4241	Pocillopora_meandrina_HIv1___Sc0000013	6788067	6789348	1282	2657	956	0.9149416635302974	+	UUCGAUCUCUGGCAUGGAACUUCUUGUC	110	56	2428	11	19	43	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6789368-6792416	Cluster_4242	Pocillopora_meandrina_HIv1___Sc0000013	6789368	6792416	3049	11719	3009	0.9399266148988822	+	UGACUCUUCAAUCUCUGAAACGACUGCUC	497	114	10997	29	69	212	298	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6835666-6836093	Cluster_4243	Pocillopora_meandrina_HIv1___Sc0000013	6835666	6836093	428	123	55	0.0	-	UAAGUUGAUCUCGGUUGUCGAAAGGCAGUA	19	0	123	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6869967-6870390	Cluster_4244	Pocillopora_meandrina_HIv1___Sc0000013	6869967	6870390	424	298	165	0.3053691275167785	.	AGCGGUCUUCUCUUUUGUGC	19	194	9	65	27	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7081962-7082376	Cluster_4245	Pocillopora_meandrina_HIv1___Sc0000013	7081962	7082376	415	75	3	0.0	-	CCUGUCGGGACCCGA	71	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7230643-7231058	Cluster_4246	Pocillopora_meandrina_HIv1___Sc0000013	7230643	7231058	416	760	7	0.9986842105263158	+	CGGACCUCAGAUCAGA	730	760	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7305232-7305828	Cluster_4247	Pocillopora_meandrina_HIv1___Sc0000013	7305232	7305828	597	5666	532	0.0035298270384751147	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	874	14	5600	6	7	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7340257-7341730	Cluster_4248	Pocillopora_meandrina_HIv1___Sc0000013	7340257	7341730	1474	953	468	0.2906610703043022	.	UCAGAACUUCAGUAGCAAUGUGCCUAUA	34	40	846	3	12	24	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7341786-7342214	Cluster_4249	Pocillopora_meandrina_HIv1___Sc0000013	7341786	7342214	429	339	184	0.46017699115044247	.	UAAGAACACAAAGAC	17	41	256	6	14	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7345946-7346369	Cluster_4250	Pocillopora_meandrina_HIv1___Sc0000013	7345946	7346369	424	145	74	0.15862068965517243	-	UUGAACUGUUGCAUGCUUCCAUCAAACAU	14	2	125	0	0	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7347542-7348292	Cluster_4251	Pocillopora_meandrina_HIv1___Sc0000013	7347542	7348292	751	717	170	0.019525801952580194	-	UGUAAUACUUCAACAAGGGUGCCUCUGUC	163	4	701	3	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7348564-7349496	Cluster_4252	Pocillopora_meandrina_HIv1___Sc0000013	7348564	7349496	933	1093	343	0.04666056724611162	-	UCUUCCUCUUUACUGUUUCAGCUGGUAC	89	12	1022	9	13	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7352067-7352496	Cluster_4253	Pocillopora_meandrina_HIv1___Sc0000013	7352067	7352496	430	817	139	0.8947368421052632	+	UUGAGUUGUAUGACACUGGACGUAGAGA	126	4	621	0	5	126	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7354773-7355198	Cluster_4254	Pocillopora_meandrina_HIv1___Sc0000013	7354773	7355198	426	176	84	0.4715909090909091	.	UGUGAAAGCGGAAUUGCUCCACUAUGAGC	13	9	159	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7379717-7380725	Cluster_4255	Pocillopora_meandrina_HIv1___Sc0000013	7379717	7380725	1009	1763	622	0.0017016449234259785	-	UUCUCUGUUUACUGACUCCUUGUGGAAUGU	67	26	1700	2	17	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7384450-7384855	Cluster_4256	Pocillopora_meandrina_HIv1___Sc0000013	7384450	7384855	406	91	36	0.945054945054945	+	UGUGUUUUCAAGGUCUGCAGCUGAUGU	19	0	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7386579-7387007	Cluster_4257	Pocillopora_meandrina_HIv1___Sc0000013	7386579	7387007	429	314	191	0.6337579617834395	.	UUCUGAGCUCAUGGCACGUG	13	95	158	35	17	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7398727-7400680	Cluster_4258	Pocillopora_meandrina_HIv1___Sc0000013	7398727	7400680	1954	4932	1635	0.11232765612327657	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	381	43	4566	31	41	83	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7400687-7401114	Cluster_4259	Pocillopora_meandrina_HIv1___Sc0000013	7400687	7401114	428	307	148	0.14006514657980457	-	UUGUCGUGAUCUUUCACUGCUUCUUGC	48	6	283	0	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7401232-7401658	Cluster_4260	Pocillopora_meandrina_HIv1___Sc0000013	7401232	7401658	427	136	56	0.051470588235294115	-	UGAACUUCUCGGCUCCAAACACUAUGG	48	0	131	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7401674-7402105	Cluster_4261	Pocillopora_meandrina_HIv1___Sc0000013	7401674	7402105	432	490	203	0.06326530612244897	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	54	9	461	0	0	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7402391-7403566	Cluster_4262	Pocillopora_meandrina_HIv1___Sc0000013	7402391	7403566	1176	897	387	0.06131549609810479	-	UAAGUGCGCUCUCAUGUAGAUAUAUGGG	83	8	825	2	12	17	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7406044-7406903	Cluster_4263	Pocillopora_meandrina_HIv1___Sc0000013	7406044	7406903	860	1555	271	0.043086816720257236	-	UGAUCUGUAUCUGAUGAAAAGCUUCCUC	307	13	1531	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7421857-7422707	Cluster_4264	Pocillopora_meandrina_HIv1___Sc0000013	7421857	7422707	851	1309	470	0.11764705882352941	-	UGUGAAUAUCCAUUUGCUUUGACUGGC	138	25	1180	20	18	20	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7423274-7425035	Cluster_4265	Pocillopora_meandrina_HIv1___Sc0000013	7423274	7425035	1762	2510	1137	0.09322709163346614	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	74	23	2297	10	27	91	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7430118-7430541	Cluster_4266	Pocillopora_meandrina_HIv1___Sc0000013	7430118	7430541	424	129	42	0.007751937984496124	-	UUGGUAACGACUUUCCGGAAAUUUCGGC	22	2	126	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7431062-7432829	Cluster_4267	Pocillopora_meandrina_HIv1___Sc0000013	7431062	7432829	1768	21526	2619	0.14698504134534982	-	UCCGGUCAAUGUUUAGAGAGCUGAAUAA	1396	162	20308	59	121	205	671	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7433202-7433630	Cluster_4268	Pocillopora_meandrina_HIv1___Sc0000013	7433202	7433630	429	360	140	0.75	.	UAGGACAAUUAGCAUUACAGCAGCU	22	5	330	4	7	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7433650-7435148	Cluster_4269	Pocillopora_meandrina_HIv1___Sc0000013	7433650	7435148	1499	1399	574	0.37240886347390995	.	CGAUUUCUUAUGUUCAUGCGACUGUUGUG	70	34	1227	12	19	28	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7436254-7436878	Cluster_4270	Pocillopora_meandrina_HIv1___Sc0000013	7436254	7436878	625	899	393	0.03337041156840934	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	33	8	859	4	3	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7436902-7437576	Cluster_4271	Pocillopora_meandrina_HIv1___Sc0000013	7436902	7437576	675	565	291	0.1415929203539823	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	35	6	500	6	0	10	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7437859-7438607	Cluster_4272	Pocillopora_meandrina_HIv1___Sc0000013	7437859	7438607	749	795	250	0.018867924528301886	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	84	1	774	3	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7441302-7442028	Cluster_4273	Pocillopora_meandrina_HIv1___Sc0000013	7441302	7442028	727	456	249	0.0021929824561403508	-	UGUGUGUCAAAGCUGAACUUAAAGAGCUC	30	7	440	0	3	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7453585-7454507	Cluster_4274	Pocillopora_meandrina_HIv1___Sc0000013	7453585	7454507	923	5418	893	0.005537098560354375	-	UGAUCACUUGGAGGGUUUGCACUCGGAG	734	75	5199	15	23	54	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7507701-7508131	Cluster_4275	Pocillopora_meandrina_HIv1___Sc0000013	7507701	7508131	431	320	142	0.04375	-	UGAUAACUGUACUCUUGAAAUUCAUCGAU	21	4	302	0	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7508153-7508565	Cluster_4276	Pocillopora_meandrina_HIv1___Sc0000013	7508153	7508565	413	196	116	0.09693877551020408	-	UACUGAUAGUGAAACUGCUCCUUGAACC	11	2	186	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7511232-7511659	Cluster_4277	Pocillopora_meandrina_HIv1___Sc0000013	7511232	7511659	428	80	23	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	2	77	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7522996-7523424	Cluster_4278	Pocillopora_meandrina_HIv1___Sc0000013	7522996	7523424	429	192	71	0.005208333333333333	-	UAAUAACGACUGCCUUUACUGAAUGGGUC	42	1	189	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7527082-7527697	Cluster_4279	Pocillopora_meandrina_HIv1___Sc0000013	7527082	7527697	616	320	140	0.034375	-	UCAUCUCGGUUUUUGCAAAAUGUCAA	18	1	302	2	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7528339-7530310	Cluster_4280	Pocillopora_meandrina_HIv1___Sc0000013	7528339	7530310	1972	5639	1559	0.06348643376485193	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	454	19	5410	19	18	59	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7533026-7533812	Cluster_4281	Pocillopora_meandrina_HIv1___Sc0000013	7533026	7533812	787	754	274	0.05702917771883289	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	55	2	719	3	8	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7535004-7535409	Cluster_4282	Pocillopora_meandrina_HIv1___Sc0000013	7535004	7535409	406	187	87	0.6310160427807486	.	UGAUAUUUUUGACCGGGCAAAAAGAAUUA	15	4	180	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7535593-7536021	Cluster_4283	Pocillopora_meandrina_HIv1___Sc0000013	7535593	7536021	429	360	96	0.9305555555555556	+	UGCAGAUCCAGGGAAAUCACAAUUGACG	83	2	351	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7541672-7542474	Cluster_4284	Pocillopora_meandrina_HIv1___Sc0000013	7541672	7542474	803	984	409	0.04369918699186992	-	UAAAGUAUCAUUCCUCGUCACGAACCCG	38	13	931	7	3	8	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7542496-7543160	Cluster_4285	Pocillopora_meandrina_HIv1___Sc0000013	7542496	7543160	665	605	318	0.1487603305785124	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	27	8	541	6	4	7	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7543455-7544203	Cluster_4286	Pocillopora_meandrina_HIv1___Sc0000013	7543455	7544203	749	759	246	0.022397891963109356	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	77	1	744	3	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7546244-7547421	Cluster_4287	Pocillopora_meandrina_HIv1___Sc0000013	7546244	7547421	1178	12204	2122	0.09283841363487381	-	UGUACCACUGAUCUUUGUAACUUUCGCU	455	181	11534	63	90	139	197	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7549121-7549521	Cluster_4288	Pocillopora_meandrina_HIv1___Sc0000013	7549121	7549521	401	126	70	0.0	-	UCCGAGAAGCUGAUUUCUGGACCAGUA	18	7	112	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7551768-7552195	Cluster_4289	Pocillopora_meandrina_HIv1___Sc0000013	7551768	7552195	428	192	31	0.07291666666666667	-	UGGGUCUACUUCGAAUUCAUCGUUGUU	77	0	183	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7559614-7560998	Cluster_4290	Pocillopora_meandrina_HIv1___Sc0000013	7559614	7560998	1385	8767	1038	0.04357248773810882	-	UGAAGAACUUGGUCGAUUACAUGUUGAUA	4276	49	8434	29	36	64	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7561746-7562427	Cluster_4291	Pocillopora_meandrina_HIv1___Sc0000013	7561746	7562427	682	1460	263	0.03287671232876712	-	UAAUAUCUGCUGUAGUAGUCAACAACUAC	321	13	1414	3	8	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7585879-7586309	Cluster_4292	Pocillopora_meandrina_HIv1___Sc0000013	7585879	7586309	431	1378	137	0.00362844702467344	-	UGGGUUGAGUGAAUUUUUAAGGAAAUUAAA	472	70	1163	8	96	27	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7589860-7590544	Cluster_4293	Pocillopora_meandrina_HIv1___Sc0000013	7589860	7590544	685	673	148	0.0029717682020802376	-	UGCUUCCUGAACAUGUGUUGCUAGAGUGGA	182	15	624	2	25	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7605446-7605875	Cluster_4294	Pocillopora_meandrina_HIv1___Sc0000013	7605446	7605875	430	183	92	0.01639344262295082	-	UUGGUGUAACCACAGCUGUCUUCCAUUUUGA	38	3	175	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7605910-7606438	Cluster_4295	Pocillopora_meandrina_HIv1___Sc0000013	7605910	7606438	529	582	270	0.027491408934707903	-	UCUACAUAACUCUGAGUGCUGCAUUUCUGU	32	10	529	2	5	30	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7606815-7608654	Cluster_4296	Pocillopora_meandrina_HIv1___Sc0000013	7606815	7608654	1840	3792	1334	0.03823839662447257	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	90	29	3593	11	19	54	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7611226-7612352	Cluster_4297	Pocillopora_meandrina_HIv1___Sc0000013	7611226	7612352	1127	1603	724	0.41235184029943855	.	UCAAGGAUAACUAACUCAUGGCUGAGAUU	38	27	1357	13	14	65	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7615407-7616149	Cluster_4298	Pocillopora_meandrina_HIv1___Sc0000013	7615407	7616149	743	741	324	0.14709851551956815	-	UCAUCUGGUGUGAUUGUAUCGUGUGCAC	29	7	663	8	6	13	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7616858-7617436	Cluster_4299	Pocillopora_meandrina_HIv1___Sc0000013	7616858	7617436	579	306	126	0.20588235294117646	.	UGAGAUCUUUUUAGCUUGAGUUUGUUGA	65	4	276	4	3	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7617490-7618180	Cluster_4300	Pocillopora_meandrina_HIv1___Sc0000013	7617490	7618180	691	595	278	0.12773109243697478	-	UUCUGAAUGAUCUAUCUCGGCAAGUGU	25	15	542	3	3	19	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7622386-7623211	Cluster_4301	Pocillopora_meandrina_HIv1___Sc0000013	7622386	7623211	826	1189	326	0.012615643397813289	-	UGUUUAUUGUGCGAACUCGACUGCCGCCAC	147	1	1167	1	2	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7624500-7624996	Cluster_4302	Pocillopora_meandrina_HIv1___Sc0000013	7624500	7624996	497	1023	222	0.0469208211143695	-	UGAUAGGACUAAGAGUAUGGUUGAAACC	221	10	950	14	3	18	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7625148-7625559	Cluster_4303	Pocillopora_meandrina_HIv1___Sc0000013	7625148	7625559	412	251	166	0.09561752988047809	-	UCCUUCUGAAAUGUUUAAGCUAAGGCUUA	7	7	221	2	2	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7636106-7636536	Cluster_4304	Pocillopora_meandrina_HIv1___Sc0000013	7636106	7636536	431	481	174	0.004158004158004158	-	UGUAUUACUGGAGUAAGUUAGAUCAUCGUCC	72	47	424	3	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7637219-7638133	Cluster_4305	Pocillopora_meandrina_HIv1___Sc0000013	7637219	7638133	915	1263	390	0.01979414093428345	-	UGAAGUCUACCAUUCUCUGACAAAUCGUC	158	11	1203	8	10	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7639344-7639771	Cluster_4306	Pocillopora_meandrina_HIv1___Sc0000013	7639344	7639771	428	185	81	0.005405405405405406	-	UCUUCUACUGUUGUGUCUUGUGGAGCACUC	18	3	181	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7644064-7644890	Cluster_4307	Pocillopora_meandrina_HIv1___Sc0000013	7644064	7644890	827	260	51	0.007692307692307693	-	UUCAUCUGUUUAAGCUUUGAAAUCUUUGC	98	3	253	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7647454-7648695	Cluster_4308	Pocillopora_meandrina_HIv1___Sc0000013	7647454	7648695	1242	10853	1425	0.9802819496913295	+	UCUGACUGACUAACAGGAUAUCUGCUUC	728	54	10572	15	35	55	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7727498-7727914	Cluster_4309	Pocillopora_meandrina_HIv1___Sc0000013	7727498	7727914	417	221	28	0.9864253393665159	+	CCGUGGAAGGUAGGC	119	212	5	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7757601-7758021	Cluster_4310	Pocillopora_meandrina_HIv1___Sc0000013	7757601	7758021	421	190	85	0.015789473684210527	-	UCCGGCUCGAAGGAAACUUUU	22	109	22	34	3	15	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7897761-7898175	Cluster_4311	Pocillopora_meandrina_HIv1___Sc0000013	7897761	7898175	415	89	12	0.033707865168539325	-	GAGACUUGAAGCGGGU	60	85	2	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7936753-7937170	Cluster_4312	Pocillopora_meandrina_HIv1___Sc0000013	7936753	7937170	418	159	30	0.050314465408805034	-	CCUGACUGGCGCCGACACA	50	156	1	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8006199-8006615	Cluster_4313	Pocillopora_meandrina_HIv1___Sc0000013	8006199	8006615	417	334	27	0.9970059880239521	+	GAGACUUGAAGCGGGU	150	323	7	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8128876-8129305	Cluster_4314	Pocillopora_meandrina_HIv1___Sc0000013	8128876	8129305	430	316	49	0.00949367088607595	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	129	1	314	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8130059-8130655	Cluster_4315	Pocillopora_meandrina_HIv1___Sc0000013	8130059	8130655	597	5648	507	0.003718130311614731	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	816	22	5585	2	7	8	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8200834-8201251	Cluster_4316	Pocillopora_meandrina_HIv1___Sc0000013	8200834	8201251	418	33796	85	5.917860101787194e-05	-	CUUGAAGCGGUUGGA	27021	33796	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8279316-8279798	Cluster_4317	Pocillopora_meandrina_HIv1___Sc0000013	8279316	8279798	483	3175	362	0.00031496062992125983	-	CAUAGACGCAAGCUCAAUACACA	1035	269	200	123	1035	1249	299	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8350706-8351129	Cluster_4318	Pocillopora_meandrina_HIv1___Sc0000013	8350706	8351129	424	369	47	1.0	+	UGUCAGUGAAGUUGAUAUGAGU	103	49	6	28	170	13	103	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8717884-8718310	Cluster_4319	Pocillopora_meandrina_HIv1___Sc0000013	8717884	8718310	427	105	36	0.0	-	AAGUAUAGCACUGUGUAUUCUUUAGGAG	19	1	96	0	0	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8718536-8719582	Cluster_4320	Pocillopora_meandrina_HIv1___Sc0000013	8718536	8719582	1047	1216	389	0.4037828947368421	.	UGAGAAUUCUGGAAUUUAUGACAACUCC	74	35	1115	12	12	17	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8784465-8784937	Cluster_4321	Pocillopora_meandrina_HIv1___Sc0000013	8784465	8784937	473	456	200	0.8201754385964912	+	UAUGUGAUGCGGUGACCAGACAACGGUGGC	19	7	392	7	8	14	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8948806-8949223	Cluster_4322	Pocillopora_meandrina_HIv1___Sc0000013	8948806	8949223	418	177	26	1.0	+	CAGCACUCUGCAAAGACG	73	164	13	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9024144-9024558	Cluster_4323	Pocillopora_meandrina_HIv1___Sc0000013	9024144	9024558	415	85	11	1.0	+	CCCCGUGUUGUAGGCG	44	83	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9076660-9078397	Cluster_4324	Pocillopora_meandrina_HIv1___Sc0000013	9076660	9078397	1738	2714	1071	0.04458364038319823	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	92	21	2576	10	22	42	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9180155-9180831	Cluster_4325	Pocillopora_meandrina_HIv1___Sc0000013	9180155	9180831	677	8045	584	0.0032318210068365445	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2148	13	7904	6	58	25	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9180909-9181394	Cluster_4326	Pocillopora_meandrina_HIv1___Sc0000013	9180909	9181394	486	362	235	0.20165745856353592	.	UCCGAUUUUCUCAACCGCCUCUUGUCCU	10	6	305	2	4	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9261838-9262253	Cluster_4327	Pocillopora_meandrina_HIv1___Sc0000013	9261838	9262253	416	134	14	0.05970149253731343	-	CGCAGCGCGUGCCUCA	65	131	1	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9289978-9290404	Cluster_4328	Pocillopora_meandrina_HIv1___Sc0000013	9289978	9290404	427	150	32	0.9733333333333334	+	UAAUCGUUGGCUUUUUCUCGAGGCGGG	52	3	146	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9301023-9301651	Cluster_4329	Pocillopora_meandrina_HIv1___Sc0000013	9301023	9301651	629	3543	405	0.9664126446514254	+	UCGUAUUCUUUUCCAUCCUCGCCGAAC	891	26	3289	29	73	44	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9396615-9397028	Cluster_4330	Pocillopora_meandrina_HIv1___Sc0000013	9396615	9397028	414	77	14	0.012987012987012988	-	CGCGGGAUGGAGCAGC	42	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9512978-9513626	Cluster_4331	Pocillopora_meandrina_HIv1___Sc0000013	9512978	9513626	649	576	261	0.71875	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	35	5	525	0	7	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9537092-9537506	Cluster_4332	Pocillopora_meandrina_HIv1___Sc0000013	9537092	9537506	415	83	27	1.0	+	CAUAUAUAGAGGGCUGUGG	17	57	12	4	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9653262-9653875	Cluster_4333	Pocillopora_meandrina_HIv1___Sc0000013	9653262	9653875	614	1995	359	0.061152882205513785	-	UGAGACUCUUUGAAGCGCAACCCGCACA	538	28	1888	5	4	25	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9815081-9815510	Cluster_4334	Pocillopora_meandrina_HIv1___Sc0000013	9815081	9815510	430	177	57	1.0	+	AAGUGAUUAAAGAUGAGCUGAACCCAGUG	16	3	171	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:12879-13298	Cluster_4335	Pocillopora_meandrina_HIv1___Sc0000014	12879	13298	420	89	28	0.0	-	CUUGAAUCGUUUGGACUGCGCCA	27	5	2	13	27	36	6	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:45180-45605	Cluster_4336	Pocillopora_meandrina_HIv1___Sc0000014	45180	45605	426	271	178	0.3985239852398524	.	AGUGGAGACGUCGGUGA	10	128	62	35	26	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:84566-84987	Cluster_4337	Pocillopora_meandrina_HIv1___Sc0000014	84566	84987	422	401	76	0.7955112219451371	.	UGUGCAGGUAGAGCAGAGGUUA	68	71	5	120	137	55	13	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:96277-96699	Cluster_4338	Pocillopora_meandrina_HIv1___Sc0000014	96277	96699	423	398	134	0.20603015075376885	.	UUCGCGUCUGAAGCUGUUAGAGU	106	53	44	18	78	194	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:137727-138140	Cluster_4339	Pocillopora_meandrina_HIv1___Sc0000014	137727	138140	414	111	46	0.14414414414414414	-	AAUGAUUUCGGAGUGUAUGCG	19	54	0	42	8	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:213610-214025	Cluster_4340	Pocillopora_meandrina_HIv1___Sc0000014	213610	214025	416	134	22	0.8805970149253731	+	CAGCCUGAAAAAAAAA	73	125	3	5	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:216454-216869	Cluster_4341	Pocillopora_meandrina_HIv1___Sc0000014	216454	216869	416	1425	18	0.9985964912280701	+	GGUUGGAUCCGGCCU	1302	1424	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:420703-421117	Cluster_4342	Pocillopora_meandrina_HIv1___Sc0000014	420703	421117	415	102	24	0.0196078431372549	-	CCCUUUGACCUCAUC	47	88	11	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:428539-428967	Cluster_4343	Pocillopora_meandrina_HIv1___Sc0000014	428539	428967	429	125	35	0.0	-	UUAGUAACUUCUUGGCUAUCUUUACAGCAU	42	0	125	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:465769-467126	Cluster_4344	Pocillopora_meandrina_HIv1___Sc0000014	465769	467126	1358	1856	560	0.5748922413793104	.	UGUGUAAUCGUUCGGUGUAAUCUUGUGUU	113	16	1790	7	9	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:467823-468252	Cluster_4345	Pocillopora_meandrina_HIv1___Sc0000014	467823	468252	430	376	51	0.0	-	UUCCAUGACUCUGUUUAAACGAAAACGAAC	232	4	370	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:489494-489920	Cluster_4346	Pocillopora_meandrina_HIv1___Sc0000014	489494	489920	427	275	143	0.06545454545454546	-	UGAAUCUGGAUAUUGCUCUCCUCUUUAUGUC	25	8	255	1	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:489970-490592	Cluster_4347	Pocillopora_meandrina_HIv1___Sc0000014	489970	490592	623	783	309	0.12132822477650064	-	UUUAACACAGUUGGCUUUAUGAAUUUCCCU	35	27	724	3	9	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:512220-512756	Cluster_4348	Pocillopora_meandrina_HIv1___Sc0000014	512220	512756	537	2703	561	1.0	+	GUGAUGUAUAAUUCAGAGACAUUU	435	179	1473	111	75	151	714	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:516209-516686	Cluster_4349	Pocillopora_meandrina_HIv1___Sc0000014	516209	516686	478	271	116	0.996309963099631	+	GAGGGAAAUCAAUUCUGGAUC	26	54	64	42	25	35	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:571646-572061	Cluster_4350	Pocillopora_meandrina_HIv1___Sc0000014	571646	572061	416	187	7	0.9946524064171123	+	UGAUUUGAGGAAGUUU	144	186	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:660805-661232	Cluster_4351	Pocillopora_meandrina_HIv1___Sc0000014	660805	661232	428	93	28	0.021505376344086023	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	24	2	87	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:700707-701107	Cluster_4352	Pocillopora_meandrina_HIv1___Sc0000014	700707	701107	401	159	98	1.0	+	CAUGUGACUGAGGGGGCA	14	87	20	25	10	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:701482-702107	Cluster_4353	Pocillopora_meandrina_HIv1___Sc0000014	701482	702107	626	4869	842	0.9960977613472992	+	AAUUCGUAGUGGUAUUCUGAUGUGA	214	1683	1848	266	251	387	434	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:764543-764990	Cluster_4354	Pocillopora_meandrina_HIv1___Sc0000014	764543	764990	448	2638	251	0.9996209249431387	+	UAGGGCUGAGAUGAAGU	297	1187	593	67	307	85	399	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:772532-772947	Cluster_4355	Pocillopora_meandrina_HIv1___Sc0000014	772532	772947	416	142	2	1.0	+	CGAGUUAGAUAGAAUA	141	142	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:779972-780389	Cluster_4356	Pocillopora_meandrina_HIv1___Sc0000014	779972	780389	418	760	37	0.0	-	AAUUGCAGAAUUCAGU	235	760	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:792680-793094	Cluster_4357	Pocillopora_meandrina_HIv1___Sc0000014	792680	793094	415	330	10	1.0	+	GAAUCGGCCGUGGGU	302	330	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:805530-805955	Cluster_4358	Pocillopora_meandrina_HIv1___Sc0000014	805530	805955	426	330	121	0.796969696969697	.	UUUUGUAUCUGGAUUCCUUGACAUCU	37	14	278	8	4	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:838169-838597	Cluster_4359	Pocillopora_meandrina_HIv1___Sc0000014	838169	838597	429	148	70	0.006756756756756757	-	UCUUUCGUCUGUUGUCGAUAAAUGAGAGC	26	1	146	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:881327-881750	Cluster_4360	Pocillopora_meandrina_HIv1___Sc0000014	881327	881750	424	301	47	0.08637873754152824	-	UGUGACAAGAUUUUUCCUGAUGU	103	4	19	5	16	162	95	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1099106-1099730	Cluster_4361	Pocillopora_meandrina_HIv1___Sc0000014	1099106	1099730	625	966	408	0.033126293995859216	-	UAGAAGACUCUUGAAACAUGGUGCAAUA	35	10	925	4	6	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1099752-1100416	Cluster_4362	Pocillopora_meandrina_HIv1___Sc0000014	1099752	1100416	665	548	301	0.1624087591240876	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	26	8	474	1	3	10	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1100711-1101459	Cluster_4363	Pocillopora_meandrina_HIv1___Sc0000014	1100711	1101459	749	804	256	0.026119402985074626	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	76	3	785	1	2	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1121523-1121948	Cluster_4364	Pocillopora_meandrina_HIv1___Sc0000014	1121523	1121948	426	202	84	0.7574257425742574	.	AAUUGACUGCUUUGAGAUUUUUAUUGAGA	31	1	198	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1134417-1135055	Cluster_4365	Pocillopora_meandrina_HIv1___Sc0000014	1134417	1135055	639	559	275	0.552772808586762	.	CAGGUUCUGAGCCUUCUGACUGACCAGGUC	62	16	521	8	4	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1307073-1307494	Cluster_4366	Pocillopora_meandrina_HIv1___Sc0000014	1307073	1307494	422	164	80	0.975609756097561	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	21	1	158	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1451321-1451767	Cluster_4367	Pocillopora_meandrina_HIv1___Sc0000014	1451321	1451767	447	485	89	0.5175257731958763	.	UCGGUUAUAAGACGCACCCUGAAUUUUU	140	6	475	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1452037-1452460	Cluster_4368	Pocillopora_meandrina_HIv1___Sc0000014	1452037	1452460	424	134	21	0.04477611940298507	-	UUAACUGGUAGUCAUGACGUCUCC	54	16	11	2	0	3	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1658721-1659133	Cluster_4369	Pocillopora_meandrina_HIv1___Sc0000014	1658721	1659133	413	190	83	0.9421052631578948	+	UGUAGACGUUUGAUCAGUAUAUCAUGAU	12	4	183	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1698695-1699129	Cluster_4370	Pocillopora_meandrina_HIv1___Sc0000014	1698695	1699129	435	536	81	0.9757462686567164	+	UCAGUAGAACACAACUGUCAAGAAGCCACA	178	29	498	3	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1701276-1701705	Cluster_4371	Pocillopora_meandrina_HIv1___Sc0000014	1701276	1701705	430	200	51	1.0	+	UGGAGACUGUUUCAAUUUCUCAUCGAAAUA	89	3	187	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1705301-1705712	Cluster_4372	Pocillopora_meandrina_HIv1___Sc0000014	1705301	1705712	412	120	57	1.0	+	UCCGAUGUCCAUGUCAUGAUUAACAGAAG	15	1	116	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1708938-1710452	Cluster_4373	Pocillopora_meandrina_HIv1___Sc0000014	1708938	1710452	1515	3315	624	0.9963800904977376	+	UAAUAGAAUUUUCAUCAACUUCAAGAGU	674	49	3217	13	12	17	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1715489-1716086	Cluster_4374	Pocillopora_meandrina_HIv1___Sc0000014	1715489	1716086	598	659	231	0.9954476479514416	+	UGAAGUCCAGAUCAUCUUGCUGUAGAAGUU	190	14	630	2	6	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1718254-1718659	Cluster_4375	Pocillopora_meandrina_HIv1___Sc0000014	1718254	1718659	406	100	38	1.0	+	UCCGAUACUGAACACUCCGAUCACUG	25	1	98	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1719216-1719771	Cluster_4376	Pocillopora_meandrina_HIv1___Sc0000014	1719216	1719771	556	1066	232	0.99812382739212	+	GGCUUCUAGGACUUCUAUGUGGAUGGCU	98	15	984	6	21	19	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1720058-1720588	Cluster_4377	Pocillopora_meandrina_HIv1___Sc0000014	1720058	1720588	531	457	133	0.9912472647702407	+	UGAAUUCUCUGACCAAGACGAUAAGAUUGGC	101	13	408	0	0	33	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1721685-1722209	Cluster_4378	Pocillopora_meandrina_HIv1___Sc0000014	1721685	1722209	525	343	145	1.0	+	UGCUUUAUCUCUAGAGCCAUGAACUUGAAG	29	5	323	0	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1725116-1725540	Cluster_4379	Pocillopora_meandrina_HIv1___Sc0000014	1725116	1725540	425	178	76	1.0	+	UGUAUCUGUAGUGCAUCCUUCGAUUGAGU	16	2	169	3	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1726852-1727274	Cluster_4380	Pocillopora_meandrina_HIv1___Sc0000014	1726852	1727274	423	139	51	0.9928057553956835	+	UGCAAGUUCUGGUUUGGUUUUGUUUGAAUC	41	3	132	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1730237-1730740	Cluster_4381	Pocillopora_meandrina_HIv1___Sc0000014	1730237	1730740	504	2101	433	0.997144217039505	+	UCUUCUCGAUCUGGCUAAAGUCUGUGUC	189	12	2045	4	4	8	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1736983-1737940	Cluster_4382	Pocillopora_meandrina_HIv1___Sc0000014	1736983	1737940	958	1809	394	0.988391376451078	+	UGGAAUUGGUAGUUCAUUAAAAGCAGGUG	210	22	1709	4	11	11	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1740024-1742285	Cluster_4383	Pocillopora_meandrina_HIv1___Sc0000014	1740024	1742285	2262	6855	2215	0.9184536834427425	+	UAUGUACGAUUUUAACUGGAAGAAACGUU	197	156	6388	31	44	83	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1750915-1751877	Cluster_4384	Pocillopora_meandrina_HIv1___Sc0000014	1750915	1751877	963	866	328	0.8325635103926097	+	UGUUCCAAUAUUUUUCGGUCGAGAUCCACU	50	69	752	14	10	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1751983-1752677	Cluster_4385	Pocillopora_meandrina_HIv1___Sc0000014	1751983	1752677	695	2038	515	0.8763493621197253	+	UGUAUGGUUUCUGCUCGUUCUCUCCACA	379	50	1837	14	21	60	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1753796-1754299	Cluster_4386	Pocillopora_meandrina_HIv1___Sc0000014	1753796	1754299	504	1606	128	0.9993773349937733	+	UCAACCAAGCCUUAGAUCAUUCAGUCUGGG	227	8	1574	2	7	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1761367-1762938	Cluster_4387	Pocillopora_meandrina_HIv1___Sc0000014	1761367	1762938	1572	2271	972	0.9264641127256715	+	UAGGAUCAUAGUCUUUGAACUCCGACGG	89	23	2075	16	12	89	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1763494-1764344	Cluster_4388	Pocillopora_meandrina_HIv1___Sc0000014	1763494	1764344	851	1592	525	0.9051507537688442	+	UGAUUUAUAGGAGUAAUGAGACAUUAU	132	15	1475	17	22	21	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1766207-1766705	Cluster_4389	Pocillopora_meandrina_HIv1___Sc0000014	1766207	1766705	499	790	167	0.9164556962025316	+	UGCAUCAUCGAUUCGUAAACUGUGCCAAUG	229	6	758	0	4	13	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1770787-1771217	Cluster_4390	Pocillopora_meandrina_HIv1___Sc0000014	1770787	1771217	431	560	76	0.9892857142857143	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	241	4	552	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1775332-1775777	Cluster_4391	Pocillopora_meandrina_HIv1___Sc0000014	1775332	1775777	446	1055	156	0.9014218009478673	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	390	26	1007	5	3	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1778202-1778631	Cluster_4392	Pocillopora_meandrina_HIv1___Sc0000014	1778202	1778631	430	345	40	1.0	+	UUCCAUGACUCUGUUUAAACGAAAACGAAC	220	1	343	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1779599-1780027	Cluster_4393	Pocillopora_meandrina_HIv1___Sc0000014	1779599	1780027	429	136	52	0.9779411764705882	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	22	0	134	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1780562-1780998	Cluster_4394	Pocillopora_meandrina_HIv1___Sc0000014	1780562	1780998	437	423	203	0.7990543735224587	.	UAUGACGUUCCAGAAUCUUUGACAAAA	36	3	392	4	7	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1781168-1781903	Cluster_4395	Pocillopora_meandrina_HIv1___Sc0000014	1781168	1781903	736	819	321	0.9523809523809523	+	UCCGUGACACAACGACUUUGCCUUGCUU	120	10	791	4	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1788267-1788696	Cluster_4396	Pocillopora_meandrina_HIv1___Sc0000014	1788267	1788696	430	334	39	0.9970059880239521	+	UGUAAUCGUAACGUUCUUUCAUGAUAAA	62	5	324	1	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1791429-1791857	Cluster_4397	Pocillopora_meandrina_HIv1___Sc0000014	1791429	1791857	429	113	49	1.0	+	GGGUUCAAGGAUUUUAGUGAACAGCCUAGGG	13	0	109	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1792562-1793419	Cluster_4398	Pocillopora_meandrina_HIv1___Sc0000014	1792562	1793419	858	515	208	0.9941747572815534	+	UCCUGAACCUGUUGGAAAGCCAAAUCCAC	39	10	491	4	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1795668-1796092	Cluster_4399	Pocillopora_meandrina_HIv1___Sc0000014	1795668	1796092	425	190	85	0.9947368421052631	+	UGAUGUUGUUGGGAUGAAGUCUUCAAUG	32	5	182	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1796852-1797272	Cluster_4400	Pocillopora_meandrina_HIv1___Sc0000014	1796852	1797272	421	197	95	1.0	+	UCUGAUCUGUCACGGAUGUGGUGUACGC	22	2	193	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1798773-1799502	Cluster_4401	Pocillopora_meandrina_HIv1___Sc0000014	1798773	1799502	730	675	101	0.9688888888888889	+	UGAUUGAUAAACCGGAUGCUGUAGACGU	381	9	658	4	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1799524-1799972	Cluster_4402	Pocillopora_meandrina_HIv1___Sc0000014	1799524	1799972	449	1256	146	0.19904458598726116	-	AAGUAAACGAGGUGUUUAAUGUGCGACUCC	437	30	1195	2	0	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1800455-1801044	Cluster_4403	Pocillopora_meandrina_HIv1___Sc0000014	1800455	1801044	590	536	262	0.7276119402985075	.	UACACACUCUCCAGGUUUCAAGUUCUUC	18	17	480	5	7	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1814534-1816110	Cluster_4404	Pocillopora_meandrina_HIv1___Sc0000014	1814534	1816110	1577	3122	914	0.9929532351057014	+	UGAAUCUCAUCUUAUCUUCUACUUCAACAUC	183	74	2962	20	11	17	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1816807-1817307	Cluster_4405	Pocillopora_meandrina_HIv1___Sc0000014	1816807	1817307	501	266	113	0.9285714285714286	+	UGAUAUUGUACAAUCUGGCUUUUUUUGAC	41	6	234	2	3	14	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1819526-1820200	Cluster_4406	Pocillopora_meandrina_HIv1___Sc0000014	1819526	1820200	675	249	141	0.9839357429718876	+	UUUAUGGAUCUAUGCUUUUGCGACACAAAU	8	4	234	1	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1823340-1825380	Cluster_4407	Pocillopora_meandrina_HIv1___Sc0000014	1823340	1825380	2041	6793	1642	0.5180332695421758	.	AAAUCUCCUAAAUCUUUGACACAAAUAGA	340	96	5580	44	137	479	457	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1835687-1836563	Cluster_4408	Pocillopora_meandrina_HIv1___Sc0000014	1835687	1836563	877	1311	395	0.5446224256292906	.	UACGUUGCUUGACCUCAUCAUUUUUGG	78	18	1237	14	3	12	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1839328-1839752	Cluster_4409	Pocillopora_meandrina_HIv1___Sc0000014	1839328	1839752	425	93	36	0.956989247311828	+	UGUGUAGAUAUGUCUUUUGGACAGGA	25	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1849056-1849484	Cluster_4410	Pocillopora_meandrina_HIv1___Sc0000014	1849056	1849484	429	145	45	0.9172413793103448	+	UUGGAUUUGCGUAAAAAAGUAAAAAAUGC	66	0	143	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1849835-1850267	Cluster_4411	Pocillopora_meandrina_HIv1___Sc0000014	1849835	1850267	433	314	114	0.9808917197452229	+	UUAGACGAUCUAGCUUCUGACUUGGUAGA	18	5	303	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1859321-1859749	Cluster_4412	Pocillopora_meandrina_HIv1___Sc0000014	1859321	1859749	429	187	92	0.8823529411764706	+	UGAACGUAUAGCCAUCCAGUUGAACUGG	15	0	179	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1872858-1873286	Cluster_4413	Pocillopora_meandrina_HIv1___Sc0000014	1872858	1873286	429	219	84	0.9908675799086758	+	UAGGAUGUAUCUGGACGUGUUCUGCACAGU	48	6	208	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1893198-1893619	Cluster_4414	Pocillopora_meandrina_HIv1___Sc0000014	1893198	1893619	422	199	24	1.0	+	AAGACUACAAAUUGCACAUGCC	80	15	2	19	131	28	4	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1980438-1980861	Cluster_4415	Pocillopora_meandrina_HIv1___Sc0000014	1980438	1980861	424	143	74	0.916083916083916	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	18	1	133	3	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1981951-1982375	Cluster_4416	Pocillopora_meandrina_HIv1___Sc0000014	1981951	1982375	425	141	89	0.851063829787234	+	UGUAUUGAUUGAACUUGUCGGUUGACC	10	2	122	2	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1982864-1983267	Cluster_4417	Pocillopora_meandrina_HIv1___Sc0000014	1982864	1983267	404	146	78	0.8493150684931506	+	UACUGGAAUAAUAACUUUACGAUCAACA	12	0	137	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1983716-1984120	Cluster_4418	Pocillopora_meandrina_HIv1___Sc0000014	1983716	1984120	405	126	84	0.8492063492063492	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	10	2	114	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2079375-2079803	Cluster_4419	Pocillopora_meandrina_HIv1___Sc0000014	2079375	2079803	429	427	41	0.00468384074941452	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	336	1	422	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2079926-2080337	Cluster_4420	Pocillopora_meandrina_HIv1___Sc0000014	2079926	2080337	412	162	107	0.6111111111111112	.	AAUUACCUGAUUUCGAUUUUCGUCAAAUG	10	2	139	0	2	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2108222-2108653	Cluster_4421	Pocillopora_meandrina_HIv1___Sc0000014	2108222	2108653	432	264	69	1.0	+	AUGGAUGAUGAGAAGGAGAUGCUCUGAGG	57	95	150	10	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2117322-2117735	Cluster_4422	Pocillopora_meandrina_HIv1___Sc0000014	2117322	2117735	414	115	67	0.11304347826086956	-	UCCGUGACUUGAUGGAGAACGAAUAAUUCG	15	8	99	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2174421-2174836	Cluster_4423	Pocillopora_meandrina_HIv1___Sc0000014	2174421	2174836	416	214	18	1.0	+	CUUGAGGCGGUUGGA	87	214	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2179577-2180006	Cluster_4424	Pocillopora_meandrina_HIv1___Sc0000014	2179577	2180006	430	215	49	0.8883720930232558	+	UAAUCGUUGGCUUUUUCUCGAGACGUGAGC	78	7	208	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2259035-2259461	Cluster_4425	Pocillopora_meandrina_HIv1___Sc0000014	2259035	2259461	427	206	107	0.2912621359223301	.	UUCAAUCUGAUCCGUGUAACUGGGACUU	13	7	154	14	12	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2338665-2339079	Cluster_4426	Pocillopora_meandrina_HIv1___Sc0000014	2338665	2339079	415	78	9	0.0	-	GUGGAUUGGCCCAGCA	66	77	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2365859-2366281	Cluster_4427	Pocillopora_meandrina_HIv1___Sc0000014	2365859	2366281	423	1413	73	0.0007077140835102619	-	AUUUUUAGCCCGCGGAAGUUGC	624	104	1	96	906	296	10	22	N	ami-nve-F-miR-2025-3p_Acropora_millepora_Praher_et_al._2021_NA;Adi-Mir-2025_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2025-3p;_nve-miR-2025-3p;adi-nve-F-miR-2025_Acropora_digitifera__Praher_et_al._2021_NA
Pocillopora_meandrina_HIv1___Sc0000014:2594743-2594833	Cluster_4428	Pocillopora_meandrina_HIv1___Sc0000014	2594743	2594833	91	331	48	0.9969788519637462	+	CGUGGUGCGUUAUUGUUUCGGU	53	67	0	17	164	48	35	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000014:2614195-2614659	Cluster_4429	Pocillopora_meandrina_HIv1___Sc0000014	2614195	2614659	465	374	234	1.0	+	GGACAUGUCGGCACA	12	140	120	41	29	15	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2639140-2639554	Cluster_4430	Pocillopora_meandrina_HIv1___Sc0000014	2639140	2639554	415	101	6	0.0	-	UUUCCGAGGUCGCGA	57	101	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2712648-2713129	Cluster_4431	Pocillopora_meandrina_HIv1___Sc0000014	2712648	2713129	482	6802	348	0.9951484857394883	+	GGCGCCGUAGCUCAGUUGG	1833	6626	41	51	12	52	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2718186-2718608	Cluster_4432	Pocillopora_meandrina_HIv1___Sc0000014	2718186	2718608	423	283	199	0.01060070671378092	-	GACGUGUACAUAGAAGAGACAGAUU	8	88	132	19	14	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2733241-2733655	Cluster_4433	Pocillopora_meandrina_HIv1___Sc0000014	2733241	2733655	415	85	25	0.023529411764705882	-	UUCGAAGAGUCGGGC	50	79	2	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2765844-2766270	Cluster_4434	Pocillopora_meandrina_HIv1___Sc0000014	2765844	2766270	427	133	25	0.007518796992481203	-	UACCGAUUUAUAAGUGAGCAGCUCUAG	30	2	129	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3044176-3044590	Cluster_4435	Pocillopora_meandrina_HIv1___Sc0000014	3044176	3044590	415	205	24	0.004878048780487805	-	CAACUUUUGACGGUA	117	205	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3098235-3098724	Cluster_4436	Pocillopora_meandrina_HIv1___Sc0000014	3098235	3098724	490	556	143	0.0017985611510791368	-	GGGAUGAAUGGGAAUCUUCUCUCUGAGCAUA	107	57	410	12	17	22	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3098874-3099419	Cluster_4437	Pocillopora_meandrina_HIv1___Sc0000014	3098874	3099419	546	635	248	0.08346456692913386	-	GGGAUGAAUGGGAAUCUUCUCUCUGAGCAUA	86	42	452	12	25	47	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3127143-3127559	Cluster_4438	Pocillopora_meandrina_HIv1___Sc0000014	3127143	3127559	417	3069	29	1.0	+	AACUUUUGACGGUGA	2471	3069	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3337472-3337897	Cluster_4439	Pocillopora_meandrina_HIv1___Sc0000014	3337472	3337897	426	168	69	0.0	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	15	1	156	2	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3441053-3441973	Cluster_4440	Pocillopora_meandrina_HIv1___Sc0000014	3441053	3441973	921	873	292	0.9553264604810997	+	UAUUCGCCGAUGAGGAUAUUCUUUGCCCUUU	61	4	811	10	13	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3513949-3514372	Cluster_4441	Pocillopora_meandrina_HIv1___Sc0000014	3513949	3514372	424	331	205	0.012084592145015106	-	AGAGGAUCUUAGCGACU	14	135	120	12	14	21	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3515780-3516194	Cluster_4442	Pocillopora_meandrina_HIv1___Sc0000014	3515780	3516194	415	186	106	0.010752688172043012	-	UCCCUCCGGUGCCUCCU	24	122	33	5	11	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3554588-3555007	Cluster_4443	Pocillopora_meandrina_HIv1___Sc0000014	3554588	3555007	420	176	38	0.16477272727272727	-	UCUGACGAAGGGCUGACA	43	99	0	63	12	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3717108-3717591	Cluster_4444	Pocillopora_meandrina_HIv1___Sc0000014	3717108	3717591	484	1791	259	0.9949748743718593	+	GGUAGCGUGGCCGAGC	760	1620	41	53	43	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3844744-3845164	Cluster_4445	Pocillopora_meandrina_HIv1___Sc0000014	3844744	3845164	421	100	23	0.99	+	UGGGCUGAAAUCAUACACGUGA	21	8	2	22	24	27	17	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3912992-3913410	Cluster_4446	Pocillopora_meandrina_HIv1___Sc0000014	3912992	3913410	419	81	8	0.07407407407407407	-	AACGAAGUACAAGUGGUAA	74	76	2	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4130672-4131077	Cluster_4447	Pocillopora_meandrina_HIv1___Sc0000014	4130672	4131077	406	91	46	0.5934065934065934	.	UAGGUAAAGUCUUUCUGUUAACAGAGUU	10	4	76	0	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4138466-4139487	Cluster_4448	Pocillopora_meandrina_HIv1___Sc0000014	4138466	4139487	1022	769	584	0.005201560468140442	-	GAUCUGACUGACUACCUCAUGAA	7	242	309	55	50	60	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4288485-4288910	Cluster_4449	Pocillopora_meandrina_HIv1___Sc0000014	4288485	4288910	426	184	45	0.2608695652173913	.	AGGGACUGAAACAUCGACUGAAGACG	45	3	156	10	0	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4558169-4559409	Cluster_4450	Pocillopora_meandrina_HIv1___Sc0000014	4558169	4559409	1241	1291	519	0.07513555383423702	-	UACAAACUGCAAAACGGUCUCACCUGGU	93	13	1228	7	4	15	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4559645-4560080	Cluster_4451	Pocillopora_meandrina_HIv1___Sc0000014	4559645	4560080	436	1279	310	0.05707584050039093	-	UGAUCUGUCGUGACUCUGAAUUAAGUUC	146	30	1189	4	7	26	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4560280-4560706	Cluster_4452	Pocillopora_meandrina_HIv1___Sc0000014	4560280	4560706	427	127	49	0.06299212598425197	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	50	2	118	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4560790-4561216	Cluster_4453	Pocillopora_meandrina_HIv1___Sc0000014	4560790	4561216	427	304	132	0.07236842105263158	-	UCCAAUCACACACAGUUCUCCUGCGGC	74	1	287	0	2	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4561591-4562660	Cluster_4454	Pocillopora_meandrina_HIv1___Sc0000014	4561591	4562660	1070	521	267	0.04798464491362764	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	24	8	492	3	1	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4658496-4658911	Cluster_4455	Pocillopora_meandrina_HIv1___Sc0000014	4658496	4658911	416	564	24	0.9964539007092199	+	GUUCUAUUUUGUUGAU	378	558	0	0	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4664447-4664868	Cluster_4456	Pocillopora_meandrina_HIv1___Sc0000014	4664447	4664868	422	129	68	0.9457364341085271	+	UUCUCUCUGUUUUGGUCUCGCCAUGGAAC	13	0	122	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4665959-4666384	Cluster_4457	Pocillopora_meandrina_HIv1___Sc0000014	4665959	4666384	426	138	73	0.8623188405797102	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	12	3	120	2	1	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4684320-4684737	Cluster_4458	Pocillopora_meandrina_HIv1___Sc0000014	4684320	4684737	418	160	111	0.9875	+	UGGUGCCAGCAAUGUAGACU	7	34	63	19	13	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4686843-4687244	Cluster_4459	Pocillopora_meandrina_HIv1___Sc0000014	4686843	4687244	402	116	86	0.9827586206896551	+	AGUGAAUGGGGUGGAACUGCU	4	39	39	13	9	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4687373-4687774	Cluster_4460	Pocillopora_meandrina_HIv1___Sc0000014	4687373	4687774	402	370	271	1.0	+	GCCGUGAAUGGACUGACACUA	10	176	97	33	14	30	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4812850-4813466	Cluster_4461	Pocillopora_meandrina_HIv1___Sc0000014	4812850	4813466	617	528	217	0.7196969696969697	.	AAAGAGCUGAAAAAAAGAAUGUUUC	132	38	424	16	2	16	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4814569-4814996	Cluster_4462	Pocillopora_meandrina_HIv1___Sc0000014	4814569	4814996	428	104	7	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	64	0	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4815922-4816551	Cluster_4463	Pocillopora_meandrina_HIv1___Sc0000014	4815922	4816551	630	3204	284	0.14731585518102372	-	UUGAAUGUUGCGAAGCUCUUUGUCCAAA	1093	32	3041	4	15	71	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4993242-4993667	Cluster_4464	Pocillopora_meandrina_HIv1___Sc0000014	4993242	4993667	426	94	36	0.010638297872340425	-	UGUGUAGAUAUGUCUUUUGGACAGGA	30	0	91	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5029629-5030045	Cluster_4465	Pocillopora_meandrina_HIv1___Sc0000014	5029629	5030045	417	291	15	0.0	-	GAGACUUGAAGCGGC	97	291	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5048490-5048913	Cluster_4466	Pocillopora_meandrina_HIv1___Sc0000014	5048490	5048913	424	525	49	0.0	-	UCUCAUAAAGAGCGUAAAGGGGC	252	14	26	7	16	409	53	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5075503-5075932	Cluster_4467	Pocillopora_meandrina_HIv1___Sc0000014	5075503	5075932	430	454	172	0.0	-	GUUUAUGAUGACAUACAGAUCUGAAA	78	103	293	14	9	25	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5082611-5083021	Cluster_4468	Pocillopora_meandrina_HIv1___Sc0000014	5082611	5083021	411	117	81	1.0	+	CUUGUUAUCCAGGACAAAGAGAAGGCU	6	29	54	3	12	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5297933-5298348	Cluster_4469	Pocillopora_meandrina_HIv1___Sc0000014	5297933	5298348	416	111	41	0.0	-	GCCGGUCUGCCGCGAU	34	94	9	3	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5335148-5335674	Cluster_4470	Pocillopora_meandrina_HIv1___Sc0000014	5335148	5335674	527	922	415	0.010845986984815618	-	GUUUCUACUGUUUGCCUGUCAAU	26	191	482	32	47	63	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5357271-5357697	Cluster_4471	Pocillopora_meandrina_HIv1___Sc0000014	5357271	5357697	427	197	104	0.09644670050761421	-	UAUUCCAAGAUUGGCCGUACCAGAGACA	16	2	180	1	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5380501-5380918	Cluster_4472	Pocillopora_meandrina_HIv1___Sc0000014	5380501	5380918	418	311	17	0.006430868167202572	-	CUGGAGUCUCGGCUU	155	310	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5520891-5521316	Cluster_4473	Pocillopora_meandrina_HIv1___Sc0000014	5520891	5521316	426	2099	53	0.9976179132920439	+	CGGCCUGAAAAAAAAAAAA	505	1333	525	78	55	51	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5733165-5733582	Cluster_4474	Pocillopora_meandrina_HIv1___Sc0000014	5733165	5733582	418	124	51	0.4112903225806452	.	UGAGCCGAUCCUGACGCAGCA	34	32	17	43	20	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5823677-5824090	Cluster_4475	Pocillopora_meandrina_HIv1___Sc0000014	5823677	5824090	414	98	24	0.9591836734693877	+	CACAAAAGGUGUUGGU	22	98	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5977390-5977814	Cluster_4476	Pocillopora_meandrina_HIv1___Sc0000014	5977390	5977814	425	93	40	0.8924731182795699	+	UGUACUGUUUGUAUUUUUUUUCCUGGGC	20	1	91	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5985949-5987921	Cluster_4477	Pocillopora_meandrina_HIv1___Sc0000014	5985949	5987921	1973	5579	1586	0.9322459222082811	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	452	41	5295	15	30	65	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5988560-5989184	Cluster_4478	Pocillopora_meandrina_HIv1___Sc0000014	5988560	5989184	625	345	162	0.9478260869565217	+	UCAUCUCGGUUUUUGCAAAAUGUCAA	16	2	326	0	1	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6025672-6026087	Cluster_4479	Pocillopora_meandrina_HIv1___Sc0000014	6025672	6026087	416	298	8	0.9865771812080537	+	GGGACUGUAGUUCAAC	273	295	2	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6048618-6049034	Cluster_4480	Pocillopora_meandrina_HIv1___Sc0000014	6048618	6049034	417	430	17	0.0069767441860465115	-	GAUGGAUGGAGACUGCG	413	425	3	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6119359-6119778	Cluster_4481	Pocillopora_meandrina_HIv1___Sc0000014	6119359	6119778	420	200	83	0.665	.	AAGCCUGUUUCGUGAAUCGCA	33	117	6	70	6	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6393303-6393732	Cluster_4482	Pocillopora_meandrina_HIv1___Sc0000014	6393303	6393732	430	231	65	1.0	+	UGCAUAGUGCAGCAAAUUCCAUC	34	13	102	5	32	60	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6491369-6491793	Cluster_4483	Pocillopora_meandrina_HIv1___Sc0000014	6491369	6491793	425	200	79	0.99	+	CUCUAUGAAAGAUUUGCACACAAUU	62	18	113	10	9	15	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6570607-6571535	Cluster_4484	Pocillopora_meandrina_HIv1___Sc0000014	6570607	6571535	929	911	288	0.9538968166849616	+	AGAACUUGGAGGAGCAAAAAGAAUUCCA	75	32	776	25	12	33	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6641266-6641681	Cluster_4485	Pocillopora_meandrina_HIv1___Sc0000014	6641266	6641681	416	285	12	0.9894736842105263	+	GCGGAACUGGCGGAA	112	284	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6659357-6659784	Cluster_4486	Pocillopora_meandrina_HIv1___Sc0000014	6659357	6659784	428	154	74	0.17532467532467533	-	GCGUUUAAAUUCUCUUCUGGCUCCCAGG	33	3	139	1	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6660037-6660525	Cluster_4487	Pocillopora_meandrina_HIv1___Sc0000014	6660037	6660525	489	1990	254	0.7185929648241206	.	UUUGGGAUCAAAGACGAAACGAGU	440	34	713	160	32	280	771	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6909066-6910206	Cluster_4488	Pocillopora_meandrina_HIv1___Sc0000014	6909066	6910206	1141	15413	1285	0.019853370531369624	-	UUUGUAGGCUCUAACAGUACAUUGUU	4354	1408	13724	39	45	69	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6913823-6914225	Cluster_4489	Pocillopora_meandrina_HIv1___Sc0000014	6913823	6914225	403	83	36	0.8072289156626506	+	UGAGAUCUUAGCGUAGUCUCCGACUGG	9	0	83	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7024208-7024732	Cluster_4490	Pocillopora_meandrina_HIv1___Sc0000014	7024208	7024732	525	2589	426	0.9521050598686752	+	UGCUUGAAUUCUGCCGAACUGUACUGC	828	24	2454	4	12	45	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7025303-7026004	Cluster_4491	Pocillopora_meandrina_HIv1___Sc0000014	7025303	7026004	702	288	131	0.9409722222222222	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	31	6	277	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7027234-7027663	Cluster_4492	Pocillopora_meandrina_HIv1___Sc0000014	7027234	7027663	430	284	162	0.8415492957746479	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	31	1	259	1	0	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7060991-7061421	Cluster_4493	Pocillopora_meandrina_HIv1___Sc0000014	7060991	7061421	431	1002	128	0.000998003992015968	-	UCCGUACUUAAAAUCCCUCACAUUGACUGU	417	22	964	4	5	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7087511-7087926	Cluster_4494	Pocillopora_meandrina_HIv1___Sc0000014	7087511	7087926	416	129	58	0.1937984496124031	-	UCUUGAAGCGUUAUCUGCCGGUCUGCC	10	21	96	7	4	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7124608-7125036	Cluster_4495	Pocillopora_meandrina_HIv1___Sc0000014	7124608	7125036	429	105	39	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCCUG	54	3	96	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7166952-7167381	Cluster_4496	Pocillopora_meandrina_HIv1___Sc0000014	7166952	7167381	430	17376	304	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCC	4096	73	17213	10	19	17	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7171665-7172103	Cluster_4497	Pocillopora_meandrina_HIv1___Sc0000014	7171665	7172103	439	1081	194	0.05365402405180388	-	UUUACAACGUCCGGCUUGACCAUUUACA	131	19	1008	8	7	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7209425-7209861	Cluster_4498	Pocillopora_meandrina_HIv1___Sc0000014	7209425	7209861	437	7056	246	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCCUG	2420	22	7022	2	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7214549-7214965	Cluster_4499	Pocillopora_meandrina_HIv1___Sc0000014	7214549	7214965	417	86	9	0.0	-	CGGCCUGAAAAAAAAAA	42	83	0	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7239259-7239676	Cluster_4500	Pocillopora_meandrina_HIv1___Sc0000014	7239259	7239676	418	123	24	0.7479674796747967	.	CGGCUUGAAGAAAAAAAAAA	27	103	1	4	6	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7247919-7248428	Cluster_4501	Pocillopora_meandrina_HIv1___Sc0000014	7247919	7248428	510	307	81	0.9185667752442996	+	UGAUGCAAUCUGUUUCUGCAUGAGGGC	49	1	298	0	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7249050-7249473	Cluster_4502	Pocillopora_meandrina_HIv1___Sc0000014	7249050	7249473	424	161	94	0.9130434782608695	+	UAUUUUCAAACUGCGACGAUUGCUUCUGA	25	3	150	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7351086-7351515	Cluster_4503	Pocillopora_meandrina_HIv1___Sc0000014	7351086	7351515	430	154	40	0.012987012987012988	-	CUCUCUCGAACAUUUUACUAUUUAGGUA	30	5	141	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7462664-7463081	Cluster_4504	Pocillopora_meandrina_HIv1___Sc0000014	7462664	7463081	418	132	22	0.0	-	GGAAUUGGUAGACGCGCU	50	131	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7526838-7527264	Cluster_4505	Pocillopora_meandrina_HIv1___Sc0000014	7526838	7527264	427	173	97	0.9190751445086706	+	UAUUCCAAGAUUGGCCGUACCAGAGACA	17	1	167	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7560462-7560889	Cluster_4506	Pocillopora_meandrina_HIv1___Sc0000014	7560462	7560889	428	113	35	0.9911504424778761	+	UGUGCCAAAGGUUUAGAACGAAAGAACG	25	1	110	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7822908-7823325	Cluster_4507	Pocillopora_meandrina_HIv1___Sc0000014	7822908	7823325	418	1026	18	0.9961013645224172	+	CUGAGAUUGCUGUAGGCU	525	1026	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8090277-8090759	Cluster_4508	Pocillopora_meandrina_HIv1___Sc0000014	8090277	8090759	483	2550	622	0.9988235294117647	+	ACUGGGAGAGAAUCAAACUGAUGCUU	217	556	1362	117	101	293	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8094498-8094979	Cluster_4509	Pocillopora_meandrina_HIv1___Sc0000014	8094498	8094979	482	613	195	1.0	+	ACUGGGAGAGAAUCAAACUGAUGGU	33	94	280	46	63	51	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8096153-8096633	Cluster_4510	Pocillopora_meandrina_HIv1___Sc0000014	8096153	8096633	481	416	239	0.9951923076923077	+	CUAGGAGAGAAUCCAGCUGAUGCUC	19	106	207	17	26	26	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8097363-8097787	Cluster_4511	Pocillopora_meandrina_HIv1___Sc0000014	8097363	8097787	425	225	97	0.9955555555555555	+	AACCUCCUAAGUAAAUAACACCACU	22	42	110	18	15	22	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8099444-8099927	Cluster_4512	Pocillopora_meandrina_HIv1___Sc0000014	8099444	8099927	484	517	253	0.9941972920696325	+	AACCUCCUUCUUGGCAUCGCUGCAUGA	35	129	242	46	39	23	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8105938-8106354	Cluster_4513	Pocillopora_meandrina_HIv1___Sc0000014	8105938	8106354	417	184	13	0.9891304347826086	+	UGCUACGAUCUUCUGAA	99	182	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8120360-8120776	Cluster_4514	Pocillopora_meandrina_HIv1___Sc0000014	8120360	8120776	417	100	7	0.98	+	UGGAAGAGGUCCUGGAUU	55	99	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8244722-8247613	Cluster_4515	Pocillopora_meandrina_HIv1___Sc0000014	8244722	8247613	2892	31261	5500	0.011419980166981222	-	UGGUCUCACGAACUUCUUUUUUUCAAGA	1464	263	30143	176	93	195	391	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8291803-8292216	Cluster_4516	Pocillopora_meandrina_HIv1___Sc0000014	8291803	8292216	414	82	24	0.036585365853658534	-	UCGAUGUCGGCUCUC	22	80	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8314928-8315357	Cluster_4517	Pocillopora_meandrina_HIv1___Sc0000014	8314928	8315357	430	126	43	0.015873015873015872	-	UCUGCCUCAUUUAAGAACUCUAGCCCAAGG	23	3	115	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8514304-8514718	Cluster_4518	Pocillopora_meandrina_HIv1___Sc0000014	8514304	8514718	415	147	16	0.9795918367346939	+	GUUAGGCGGAACCUG	43	147	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8548731-8549222	Cluster_4519	Pocillopora_meandrina_HIv1___Sc0000014	8548731	8549222	492	6050	1388	0.9887603305785124	+	AAAUUGGAACGAUACAGAGAAGAUUAGCA	146	1133	2972	457	425	577	486	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8675063-8675485	Cluster_4520	Pocillopora_meandrina_HIv1___Sc0000014	8675063	8675485	423	99	44	0.9797979797979798	+	UGAUUGCAGAGCACAGCAUUGCCACC	9	2	92	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8695815-8696221	Cluster_4521	Pocillopora_meandrina_HIv1___Sc0000014	8695815	8696221	407	129	91	0.007751937984496124	-	CACUGGCGUAGAACCAAGUUGGGACU	8	36	56	6	7	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9018699-9019108	Cluster_4522	Pocillopora_meandrina_HIv1___Sc0000014	9018699	9019108	410	73	11	1.0	+	GAGACUUGAAGCGGGU	51	73	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9034686-9035113	Cluster_4523	Pocillopora_meandrina_HIv1___Sc0000014	9034686	9035113	428	4727	40	0.0	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAA	2417	684	3889	67	29	18	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9077979-9078682	Cluster_4524	Pocillopora_meandrina_HIv1___Sc0000014	9077979	9078682	704	582	246	0.06357388316151202	-	UAAUUUAUCCAUGUAUUCUUGAAGACGU	33	8	536	4	2	18	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9158628-9159057	Cluster_4525	Pocillopora_meandrina_HIv1___Sc0000014	9158628	9159057	430	891	169	0.9842873176206509	+	AUUUAUCCAAAGAACAACGACUCGAGGUC	202	24	704	4	28	9	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9192245-9192674	Cluster_4526	Pocillopora_meandrina_HIv1___Sc0000014	9192245	9192674	430	3282	162	0.9960390006093846	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	1406	8	3252	2	3	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9355807-9356269	Cluster_4527	Pocillopora_meandrina_HIv1___Sc0000014	9355807	9356269	463	241	166	0.975103734439834	+	GUGAAUUUGGAUAAACUGUGGUCCCU	5	66	113	16	18	22	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9356489-9356904	Cluster_4528	Pocillopora_meandrina_HIv1___Sc0000014	9356489	9356904	416	212	117	0.9905660377358491	+	CGCAGAGCUGAAGAAA	28	112	48	21	8	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9365459-9365552	Cluster_4529	Pocillopora_meandrina_HIv1___Sc0000014	9365459	9365552	94	10858	144	0.0	-	UUCCAGAUUUGUAUCAUUGUUAU	7330	88	18	141	246	9968	397	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000014:9408787-9409201	Cluster_4530	Pocillopora_meandrina_HIv1___Sc0000014	9408787	9409201	415	143	11	1.0	+	CCGUGUUGUAGGCUC	119	139	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9519073-9519487	Cluster_4531	Pocillopora_meandrina_HIv1___Sc0000014	9519073	9519487	415	140	64	0.6857142857142857	.	AAGGUCUGUUGAGCUGCACAAUCUCAGG	13	6	129	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:37644-38073	Cluster_4532	Pocillopora_meandrina_HIv1___Sc0000015	37644	38073	430	183	54	0.03278688524590164	-	UGAAAACUUAACAACGGACGGUAGGUCAUU	40	5	160	3	7	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:84063-84975	Cluster_4533	Pocillopora_meandrina_HIv1___Sc0000015	84063	84975	913	3643	538	0.4735108427120505	.	AUUUGUGAAAGAAAUGAUUUGGAGACCCC	439	35	3385	15	116	20	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:85347-85924	Cluster_4534	Pocillopora_meandrina_HIv1___Sc0000015	85347	85924	578	3491	406	0.5511314809510169	.	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	372	60	3285	6	19	26	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:86507-86955	Cluster_4535	Pocillopora_meandrina_HIv1___Sc0000015	86507	86955	449	1346	125	0.4457652303120357	.	UCAGUGUUUUGUAGUCCAAUGAAACUAAGC	300	22	1293	10	13	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:87437-88212	Cluster_4536	Pocillopora_meandrina_HIv1___Sc0000015	87437	88212	776	7201	437	0.09457019858353007	-	UCACCAUGAAAAGACUCUGGGCCAAAG	1776	21	7053	6	14	65	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:122289-123222	Cluster_4537	Pocillopora_meandrina_HIv1___Sc0000015	122289	123222	934	638	156	0.5705329153605015	.	UGUACUUUCUUUGGGCCAUGUAAUCU	69	11	583	7	6	6	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:237145-237560	Cluster_4538	Pocillopora_meandrina_HIv1___Sc0000015	237145	237560	416	94	19	1.0	+	GUGAGGCCUCCUGACU	43	93	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:308150-308556	Cluster_4539	Pocillopora_meandrina_HIv1___Sc0000015	308150	308556	407	224	154	0.9955357142857143	+	AACGGUGCCAAGAAGAA	6	99	70	9	10	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:309011-309465	Cluster_4540	Pocillopora_meandrina_HIv1___Sc0000015	309011	309465	455	1256	239	0.9968152866242038	+	UCGGCCCUUUCGAAGCUCAGAGC	365	148	353	91	49	530	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:376420-377588	Cluster_4541	Pocillopora_meandrina_HIv1___Sc0000015	376420	377588	1169	1063	233	0.7243650047036688	.	UAUUUUCUUCUGGUGGUUGAUGUCCUC	212	19	1012	5	8	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:377611-378020	Cluster_4542	Pocillopora_meandrina_HIv1___Sc0000015	377611	378020	410	127	74	0.5039370078740157	.	UUAACUCCACAACAGAACUCAAAUUCA	15	5	102	1	2	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:473953-474380	Cluster_4543	Pocillopora_meandrina_HIv1___Sc0000015	473953	474380	428	577	118	0.9220103986135182	+	UGUGACAGCUCUUUUCCUCCUGCAAAGA	126	18	536	3	1	13	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:503926-504356	Cluster_4544	Pocillopora_meandrina_HIv1___Sc0000015	503926	504356	431	321	71	0.0	-	CGGAUGUCCAUUCAAGAACCUGAAAACUAU	54	7	306	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:566206-566621	Cluster_4545	Pocillopora_meandrina_HIv1___Sc0000015	566206	566621	416	156	9	1.0	+	AGUGUGCCCUUAACUA	140	152	3	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:963175-963592	Cluster_4546	Pocillopora_meandrina_HIv1___Sc0000015	963175	963592	418	1736	27	0.009792626728110598	-	CUUUCUGGAGUUAAGGCG	1696	1728	4	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1021790-1022210	Cluster_4547	Pocillopora_meandrina_HIv1___Sc0000015	1021790	1022210	421	90	15	1.0	+	UCCGUGUGUUUGAUUGGAACAU	27	11	7	10	39	23	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1067869-1068297	Cluster_4548	Pocillopora_meandrina_HIv1___Sc0000015	1067869	1068297	429	152	46	0.9868421052631579	+	GAAGAGACCAAUCCCAAGUGGCGUAGAUA	93	10	129	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1164772-1165200	Cluster_4549	Pocillopora_meandrina_HIv1___Sc0000015	1164772	1165200	429	227	32	0.9911894273127754	+	UAGCAAAACAAACAGGUCUUUCGAUGGGA	142	6	219	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1253254-1253683	Cluster_4550	Pocillopora_meandrina_HIv1___Sc0000015	1253254	1253683	430	691	113	1.0	+	UCGGUACUCUGUUCAAUAAUAUUUCUC	242	4	681	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1520535-1520962	Cluster_4551	Pocillopora_meandrina_HIv1___Sc0000015	1520535	1520962	428	177	31	0.11864406779661017	-	UUGCAAAGAUAAAUCCGUGGUGAACUUC	69	2	171	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1564041-1564464	Cluster_4552	Pocillopora_meandrina_HIv1___Sc0000015	1564041	1564464	424	131	30	0.9694656488549618	+	UCGGAUUUUAAGGAGACAGCCCGUCAGU	34	4	61	3	2	21	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1699629-1700330	Cluster_4553	Pocillopora_meandrina_HIv1___Sc0000015	1699629	1700330	702	253	127	0.9130434782608695	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	25	4	239	0	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1701560-1701988	Cluster_4554	Pocillopora_meandrina_HIv1___Sc0000015	1701560	1701988	429	208	117	0.875	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	40	3	192	0	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1754938-1755365	Cluster_4555	Pocillopora_meandrina_HIv1___Sc0000015	1754938	1755365	428	173	61	0.9826589595375722	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	30	2	163	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1761144-1761570	Cluster_4556	Pocillopora_meandrina_HIv1___Sc0000015	1761144	1761570	427	135	54	0.044444444444444446	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	35	4	127	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1783786-1784599	Cluster_4557	Pocillopora_meandrina_HIv1___Sc0000015	1783786	1784599	814	404	227	0.11386138613861387	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	16	8	362	2	1	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1884414-1884922	Cluster_4558	Pocillopora_meandrina_HIv1___Sc0000015	1884414	1884922	509	393	143	1.0	+	UGUGUCUUGUAUGCUCUUAAGGAGUCGUC	29	8	381	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1908015-1908452	Cluster_4559	Pocillopora_meandrina_HIv1___Sc0000015	1908015	1908452	438	472	174	0.8516949152542372	+	UGUAAGACGCACUCUACUCUGUUGU	66	40	390	10	6	3	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1913033-1913478	Cluster_4560	Pocillopora_meandrina_HIv1___Sc0000015	1913033	1913478	446	270	88	0.32592592592592595	.	AAAGUUAUGAAUAAAAGGAUCUCUGAAGUG	28	0	263	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1920978-1922480	Cluster_4561	Pocillopora_meandrina_HIv1___Sc0000015	1920978	1922480	1503	3577	1050	0.9661727704780543	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	265	39	3373	10	38	58	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1930537-1930964	Cluster_4562	Pocillopora_meandrina_HIv1___Sc0000015	1930537	1930964	428	108	11	1.0	+	UACCAAGGUCUUGUAGUCUAGUACAACU	65	0	107	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1948482-1949012	Cluster_4563	Pocillopora_meandrina_HIv1___Sc0000015	1948482	1949012	531	6426	432	0.024120759414877062	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	1590	13	6207	2	37	18	149	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1984623-1985038	Cluster_4564	Pocillopora_meandrina_HIv1___Sc0000015	1984623	1985038	416	179	7	0.0	-	CGUUGCCUAGAUUUGU	107	179	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2137008-2137431	Cluster_4565	Pocillopora_meandrina_HIv1___Sc0000015	2137008	2137431	424	108	37	0.06481481481481481	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	21	2	104	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2179033-2179463	Cluster_4566	Pocillopora_meandrina_HIv1___Sc0000015	2179033	2179463	431	528	65	0.9981060606060606	+	UGACAAUCAUGCUGCUAAGUUCCUACGC	145	0	523	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2217630-2218098	Cluster_4567	Pocillopora_meandrina_HIv1___Sc0000015	2217630	2218098	469	387	257	0.002583979328165375	-	CAGUGACUAUCUUGAAUCAGCA	8	130	155	25	30	18	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2219352-2219768	Cluster_4568	Pocillopora_meandrina_HIv1___Sc0000015	2219352	2219768	417	188	141	0.005319148936170213	-	CGAACUAUAGAUCAGCUGAAGAAAACUGUU	6	52	94	10	15	14	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2313548-2313964	Cluster_4569	Pocillopora_meandrina_HIv1___Sc0000015	2313548	2313964	417	133	24	0.9398496240601504	+	GCGAUUACAGGCGACGAA	23	131	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2354737-2355150	Cluster_4570	Pocillopora_meandrina_HIv1___Sc0000015	2354737	2355150	414	114	39	0.7105263157894737	.	CUUGCGGCGGGGCCU	59	94	7	2	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2366479-2366907	Cluster_4571	Pocillopora_meandrina_HIv1___Sc0000015	2366479	2366907	429	484	282	0.010330578512396695	-	GAAGGAAUAAAAACGAUCGACA	29	174	150	46	55	31	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2498054-2498639	Cluster_4572	Pocillopora_meandrina_HIv1___Sc0000015	2498054	2498639	586	612	419	0.0	-	GAUGAUAGAGACUGGGACUACC	8	227	200	53	48	44	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2499478-2499890	Cluster_4573	Pocillopora_meandrina_HIv1___Sc0000015	2499478	2499890	413	174	114	0.005747126436781609	-	GACGGACCAAAAGGACC	11	88	31	4	8	21	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2588192-2588971	Cluster_4574	Pocillopora_meandrina_HIv1___Sc0000015	2588192	2588971	780	425	177	0.06588235294117648	-	UAUUAUACUGCGGGUUACUCAGCCAAGC	21	3	384	1	1	12	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2589511-2591482	Cluster_4575	Pocillopora_meandrina_HIv1___Sc0000015	2589511	2591482	1972	6746	1674	0.058256744737622296	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	462	50	6458	17	25	75	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2691120-2691596	Cluster_4576	Pocillopora_meandrina_HIv1___Sc0000015	2691120	2691596	477	2235	303	0.9995525727069351	+	GGCCUGUUGGUCUAGUGGCAUGAUUCU	807	333	1805	22	16	19	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2693842-2694272	Cluster_4577	Pocillopora_meandrina_HIv1___Sc0000015	2693842	2694272	431	1132	218	0.0008833922261484099	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	454	99	979	8	18	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2695144-2695612	Cluster_4578	Pocillopora_meandrina_HIv1___Sc0000015	2695144	2695612	469	2727	342	0.9992665933259993	+	GGCCUGUUGGUCUAGUGGUAUGAUUCU	1165	334	2287	21	36	32	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2747588-2748003	Cluster_4579	Pocillopora_meandrina_HIv1___Sc0000015	2747588	2748003	416	1009	27	0.0	-	CUUUCCGAGGUCGCCA	314	1009	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2831547-2831973	Cluster_4580	Pocillopora_meandrina_HIv1___Sc0000015	2831547	2831973	427	86	36	0.023255813953488372	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	29	0	82	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2908426-2908850	Cluster_4581	Pocillopora_meandrina_HIv1___Sc0000015	2908426	2908850	425	98	39	0.9897959183673469	+	UGUUUGAUCUUUAGGUCCUUCGGACAUAGUU	15	3	92	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2943925-2944456	Cluster_4582	Pocillopora_meandrina_HIv1___Sc0000015	2943925	2944456	532	10993	536	0.9996361320840534	+	CGGAUAAGUACACUUGGCACAUUC	4115	461	4725	136	121	200	5350	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2945554-2946088	Cluster_4583	Pocillopora_meandrina_HIv1___Sc0000015	2945554	2946088	535	4508	577	0.9991126885536823	+	GUGCUACAUUAGAACCCAGUCUACUGA	428	438	2524	204	225	460	657	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3136577-3136995	Cluster_4584	Pocillopora_meandrina_HIv1___Sc0000015	3136577	3136995	419	127	64	1.0	+	UGACAAUUCUGAUGGUUUUCACAAUUCUGA	34	5	118	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3137198-3137725	Cluster_4585	Pocillopora_meandrina_HIv1___Sc0000015	3137198	3137725	528	326	147	0.9877300613496932	+	UACCUAAUUAGAUACAUCCUGUUCACAGA	15	7	308	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3138374-3138792	Cluster_4586	Pocillopora_meandrina_HIv1___Sc0000015	3138374	3138792	419	120	54	0.9916666666666667	+	UGAAGAUCUGUAGCAAGGCAAAACUUAGC	26	4	111	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3139218-3139827	Cluster_4587	Pocillopora_meandrina_HIv1___Sc0000015	3139218	3139827	610	1240	335	0.9983870967741936	+	UGUUGUCUUCGCAGGUUGCAGUUGUCC	147	21	1182	4	12	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3142394-3142954	Cluster_4588	Pocillopora_meandrina_HIv1___Sc0000015	3142394	3142954	561	1016	216	0.969488188976378	+	UGAAACGUCAAGUGCUGCAGAAAUUCUGC	185	38	948	16	8	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3143027-3143692	Cluster_4589	Pocillopora_meandrina_HIv1___Sc0000015	3143027	3143692	666	11012	971	0.9612241191427534	+	UAGGAAGAUACAAGACUACAAAUUUUAGU	1502	210	10309	24	48	222	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3143740-3145497	Cluster_4590	Pocillopora_meandrina_HIv1___Sc0000015	3143740	3145497	1758	2104	745	0.9909695817490495	+	UGUAAACUUCUAUGGGUUUCUUUGACGU	79	31	2017	10	7	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3147305-3147741	Cluster_4591	Pocillopora_meandrina_HIv1___Sc0000015	3147305	3147741	437	479	162	0.9937369519832986	+	UUUCCGGUCUUUUUGCAGCUUUUCUGUGA	51	7	465	0	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3149186-3149832	Cluster_4592	Pocillopora_meandrina_HIv1___Sc0000015	3149186	3149832	647	577	240	0.7157712305025996	.	UUUGCAGGAAAUGUGAUUUAAAAGGAAAUGU	37	4	535	2	3	10	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3149890-3150317	Cluster_4593	Pocillopora_meandrina_HIv1___Sc0000015	3149890	3150317	428	394	54	0.0	-	ACUGAGAUUCUGGCUGGAUUGUUCCACU	171	1	389	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3150653-3152266	Cluster_4594	Pocillopora_meandrina_HIv1___Sc0000015	3150653	3152266	1614	4325	886	0.8476300578034682	+	UAACACAACUCGCUUCCGGUCACGACACU	374	47	4099	20	28	37	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3152356-3152776	Cluster_4595	Pocillopora_meandrina_HIv1___Sc0000015	3152356	3152776	421	141	60	0.9574468085106383	+	UUACAGAAAUUAAUGCGGGAAACAGUACG	24	4	136	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3152945-3153763	Cluster_4596	Pocillopora_meandrina_HIv1___Sc0000015	3152945	3153763	819	735	365	0.9904761904761905	+	UGUAAACUUCUACGGGUUUCUUUGACGU	57	9	687	10	3	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3155089-3155641	Cluster_4597	Pocillopora_meandrina_HIv1___Sc0000015	3155089	3155641	553	244	87	0.9221311475409836	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	34	6	217	0	2	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3156880-3158100	Cluster_4598	Pocillopora_meandrina_HIv1___Sc0000015	3156880	3158100	1221	2013	506	0.8002980625931445	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	486	11	1903	6	9	28	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3159946-3161189	Cluster_4599	Pocillopora_meandrina_HIv1___Sc0000015	3159946	3161189	1244	4160	1063	0.7641826923076923	.	UCAGCGAAGAAUUAAAGAAGAACGG	161	77	3659	14	23	64	323	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3161679-3162080	Cluster_4600	Pocillopora_meandrina_HIv1___Sc0000015	3161679	3162080	402	155	110	0.9935483870967742	+	UUUUCGUUUAAUUCCUGGACAAGGGCUAGUU	5	9	140	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3162249-3164090	Cluster_4601	Pocillopora_meandrina_HIv1___Sc0000015	3162249	3164090	1842	5347	1385	0.9336076304469796	+	UGAGAACGACGUCACCAGGCUUUAAGG	178	87	4929	15	27	94	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3164897-3165319	Cluster_4602	Pocillopora_meandrina_HIv1___Sc0000015	3164897	3165319	423	310	171	0.8483870967741935	+	UCGGUACGUGCGAACACGAAAAGGAUC	13	5	277	3	4	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3165435-3167679	Cluster_4603	Pocillopora_meandrina_HIv1___Sc0000015	3165435	3167679	2245	5098	1654	0.8985876814437034	+	UGUAUCCUGAAGCAUAAGACGCAGUCG	153	120	4574	29	54	73	248	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3167847-3168312	Cluster_4604	Pocillopora_meandrina_HIv1___Sc0000015	3167847	3168312	466	445	189	0.9865168539325843	+	UGUGCUGUUGUCGGAAGCUUGCUGGCAGU	48	10	422	0	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3170293-3170722	Cluster_4605	Pocillopora_meandrina_HIv1___Sc0000015	3170293	3170722	430	175	72	0.9942857142857143	+	UGAGAUUACGAAUUUUACGAGCGAGAACGU	40	1	167	1	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3171419-3171832	Cluster_4606	Pocillopora_meandrina_HIv1___Sc0000015	3171419	3171832	414	162	69	0.9938271604938271	+	UGCAACGAUUUUCAGUGGACACAAAUGGGA	49	1	157	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3175207-3176560	Cluster_4607	Pocillopora_meandrina_HIv1___Sc0000015	3175207	3176560	1354	8458	1661	0.9368645069756444	+	UGAGACUUGUUGUUGGGUAACUGACGUG	929	73	8089	22	35	107	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3626943-3627363	Cluster_4608	Pocillopora_meandrina_HIv1___Sc0000015	3626943	3627363	421	84	22	0.0	-	UACUGCUAUUCUUCUUCAGGC	27	9	0	35	17	18	5	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3719411-3719837	Cluster_4609	Pocillopora_meandrina_HIv1___Sc0000015	3719411	3719837	427	164	46	0.21951219512195122	.	UGAUUGGUGCAUUUCGAUCCUUGCUGU	79	2	156	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3776683-3777111	Cluster_4610	Pocillopora_meandrina_HIv1___Sc0000015	3776683	3777111	429	139	37	0.007194244604316547	-	UGAAACGUGUUGCUGAACGCUUGUUGUAG	23	0	138	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3777214-3777641	Cluster_4611	Pocillopora_meandrina_HIv1___Sc0000015	3777214	3777641	428	84	13	0.011904761904761904	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	44	0	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3822576-3823003	Cluster_4612	Pocillopora_meandrina_HIv1___Sc0000015	3822576	3823003	428	89	20	0.9775280898876404	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	24	0	88	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3855316-3855747	Cluster_4613	Pocillopora_meandrina_HIv1___Sc0000015	3855316	3855747	432	213	135	0.4272300469483568	.	UGUAUUUGCCGGUAUUCGAGAUUCCUUC	8	10	182	3	2	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3932069-3932483	Cluster_4614	Pocillopora_meandrina_HIv1___Sc0000015	3932069	3932483	415	95	15	0.010526315789473684	-	AGUGUGCUCCUAACGG	19	95	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4067580-4068007	Cluster_4615	Pocillopora_meandrina_HIv1___Sc0000015	4067580	4068007	428	238	112	0.907563025210084	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	24	4	221	1	1	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4161872-4162300	Cluster_4616	Pocillopora_meandrina_HIv1___Sc0000015	4161872	4162300	429	919	17	0.0	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	793	0	919	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4266460-4266875	Cluster_4617	Pocillopora_meandrina_HIv1___Sc0000015	4266460	4266875	416	158	12	1.0	+	CUGUUCGAGCGUCAUU	93	155	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4272438-4272852	Cluster_4618	Pocillopora_meandrina_HIv1___Sc0000015	4272438	4272852	415	100	22	0.14	-	CUUUCCGUGGUCGCG	57	89	5	0	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4602746-4603154	Cluster_4619	Pocillopora_meandrina_HIv1___Sc0000015	4602746	4603154	409	229	166	0.0	-	UGCUGGAACCUGUACGCAAGGAGACA	5	113	64	8	15	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4604728-4605134	Cluster_4620	Pocillopora_meandrina_HIv1___Sc0000015	4604728	4605134	407	298	223	0.0	-	GCUGGAACCUGUACGCAAGGAAGUA	7	94	86	32	37	29	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4606846-4607255	Cluster_4621	Pocillopora_meandrina_HIv1___Sc0000015	4606846	4607255	410	132	99	0.030303030303030304	-	AGGAAAGACGAUGUUGCUGCC	5	52	29	13	8	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4719321-4719736	Cluster_4622	Pocillopora_meandrina_HIv1___Sc0000015	4719321	4719736	416	240	74	0.975	+	UGUAUCCCAACCAAGU	134	141	97	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4858468-4858886	Cluster_4623	Pocillopora_meandrina_HIv1___Sc0000015	4858468	4858886	419	138	26	1.0	+	AGAGAGCUUUCUGAACCAGAA	39	37	0	42	58	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4859061-4859670	Cluster_4624	Pocillopora_meandrina_HIv1___Sc0000015	4859061	4859670	610	590	61	1.0	+	UGUGGUUCGGAAUGCUUUCUCC	340	32	2	61	468	18	9	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5252570-5253001	Cluster_4625	Pocillopora_meandrina_HIv1___Sc0000015	5252570	5253001	432	365	149	0.10136986301369863	-	UGUGUCAGAUGCGUUUCAGAAAUGGUU	111	2	342	4	0	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5253148-5253805	Cluster_4626	Pocillopora_meandrina_HIv1___Sc0000015	5253148	5253805	658	637	309	0.3924646781789639	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	32	8	564	3	8	18	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5254025-5254682	Cluster_4627	Pocillopora_meandrina_HIv1___Sc0000015	5254025	5254682	658	1078	310	0.0862708719851577	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	99	5	1013	6	3	26	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5254920-5255346	Cluster_4628	Pocillopora_meandrina_HIv1___Sc0000015	5254920	5255346	427	264	143	0.10606060606060606	-	UGAGUCGAGGUUAUUCACAAUACGAGC	39	6	236	1	3	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5319061-5319480	Cluster_4629	Pocillopora_meandrina_HIv1___Sc0000015	5319061	5319480	420	23824	106	4.1974479516454e-05	-	CUUUCUGGAGUUAAGGCA	10461	23824	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5640163-5640592	Cluster_4630	Pocillopora_meandrina_HIv1___Sc0000015	5640163	5640592	430	157	53	0.9745222929936306	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	21	1	154	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5920350-5920918	Cluster_4631	Pocillopora_meandrina_HIv1___Sc0000015	5920350	5920918	569	1615	367	0.10959752321981424	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	266	12	1540	4	4	33	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6137366-6138033	Cluster_4632	Pocillopora_meandrina_HIv1___Sc0000015	6137366	6138033	668	649	118	0.20955315870570107	.	UCGACGUCGAUAUCAACAUUCUUAAUGU	216	1	532	0	25	2	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6142344-6142771	Cluster_4633	Pocillopora_meandrina_HIv1___Sc0000015	6142344	6142771	428	251	128	0.6175298804780877	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	40	26	201	4	6	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6290041-6290469	Cluster_4634	Pocillopora_meandrina_HIv1___Sc0000015	6290041	6290469	429	521	75	0.9884836852207294	+	UUGUGUAUUAAGUGAGUUGUGAUUUCGUU	142	4	360	6	7	37	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6307677-6308086	Cluster_4635	Pocillopora_meandrina_HIv1___Sc0000015	6307677	6308086	410	90	44	1.0	+	AACUGUGAGAUUGUGUGAGAGGUGAGC	16	11	68	4	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6409860-6410277	Cluster_4636	Pocillopora_meandrina_HIv1___Sc0000015	6409860	6410277	418	119	43	0.03361344537815126	-	CUUGCAGUGCUCCGCGACC	13	98	0	4	0	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6426310-6426739	Cluster_4637	Pocillopora_meandrina_HIv1___Sc0000015	6426310	6426739	430	1179	101	0.0008481764206955047	-	UUACGUAUGCUCUUCACACUCAAGCCUAA	342	21	1118	7	15	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6434563-6434974	Cluster_4638	Pocillopora_meandrina_HIv1___Sc0000015	6434563	6434974	412	88	25	0.07954545454545454	-	UCCGCUACUUUGACCUCGU	25	82	2	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6538539-6538960	Cluster_4639	Pocillopora_meandrina_HIv1___Sc0000015	6538539	6538960	422	283	116	0.12367491166077739	-	UGCGUCUGUUCAGUGAUGGAU	60	121	24	107	23	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6803488-6803949	Cluster_4640	Pocillopora_meandrina_HIv1___Sc0000015	6803488	6803949	462	34290	827	8.748906386701662e-05	-	GCACUGAUGGUUCAGUGGUAGAAUUCUC	14449	1002	31958	288	407	256	379	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6806070-6806578	Cluster_4641	Pocillopora_meandrina_HIv1___Sc0000015	6806070	6806578	509	492	138	0.926829268292683	+	GCACUUGUGGUUCAGUGGUUGAACGCU	52	237	163	41	36	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6810457-6810877	Cluster_4642	Pocillopora_meandrina_HIv1___Sc0000015	6810457	6810877	421	78	23	0.0	-	GGGGGCAUAGCUCAGUGGUAGAGCAUU	18	1	52	4	9	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6812948-6813520	Cluster_4643	Pocillopora_meandrina_HIv1___Sc0000015	6812948	6813520	573	725	470	0.006896551724137931	-	CGUUGGGGCGGUGUC	27	296	240	55	42	56	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6817521-6818119	Cluster_4644	Pocillopora_meandrina_HIv1___Sc0000015	6817521	6818119	599	787	482	0.0063532401524777635	-	GACCGAAUGGAAACUCUUUACGUUGACGU	14	280	289	66	49	57	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6819204-6819622	Cluster_4645	Pocillopora_meandrina_HIv1___Sc0000015	6819204	6819622	419	90	62	0.0	-	CAGUAGAUCGAGAUCCAAGCUCUGACC	4	24	34	19	5	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6821249-6821667	Cluster_4646	Pocillopora_meandrina_HIv1___Sc0000015	6821249	6821667	419	401	280	0.0	-	AGGACGAUGCGCUGUC	6	142	141	24	41	25	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6933551-6933966	Cluster_4647	Pocillopora_meandrina_HIv1___Sc0000015	6933551	6933966	416	250	12	0.968	+	GCUGGAUGAUGAGACA	238	244	4	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7024427-7024838	Cluster_4648	Pocillopora_meandrina_HIv1___Sc0000015	7024427	7024838	412	191	137	0.005235602094240838	-	GUAAACUGUAAAAUGGUAG	5	61	85	8	12	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7029745-7030429	Cluster_4649	Pocillopora_meandrina_HIv1___Sc0000015	7029745	7030429	685	15952	3331	0.9850802407221665	+	CCCUCGUGGCUGAUCUGGUGAU	671	5197	5003	1340	2224	1135	1053	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7075190-7075786	Cluster_4650	Pocillopora_meandrina_HIv1___Sc0000015	7075190	7075786	597	5648	519	0.0035410764872521247	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	851	20	5582	3	6	12	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7220786-7221213	Cluster_4651	Pocillopora_meandrina_HIv1___Sc0000015	7220786	7221213	428	278	142	0.6187050359712231	.	UGGCCGAUCUGGACACUCGUU	14	117	39	69	25	24	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7385939-7386363	Cluster_4652	Pocillopora_meandrina_HIv1___Sc0000015	7385939	7386363	425	237	127	0.3881856540084388	.	UGCGAAAUGAACUCAGAGCUUUCUG	46	7	204	6	4	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7387855-7388282	Cluster_4653	Pocillopora_meandrina_HIv1___Sc0000015	7387855	7388282	428	107	8	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	77	0	106	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7563932-7564528	Cluster_4654	Pocillopora_meandrina_HIv1___Sc0000015	7563932	7564528	597	5564	531	0.9973040977713875	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	830	15	5509	4	3	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7642036-7642588	Cluster_4655	Pocillopora_meandrina_HIv1___Sc0000015	7642036	7642588	553	607	229	0.042833607907743	-	UAUCUGGAAAACUAUAUGAUCUUAACUUUA	65	9	579	1	3	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7782339-7782875	Cluster_4656	Pocillopora_meandrina_HIv1___Sc0000015	7782339	7782875	537	622	198	0.8344051446945338	+	UGUAAACCUCUGAUUACC	68	109	457	1	0	19	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7789352-7789778	Cluster_4657	Pocillopora_meandrina_HIv1___Sc0000015	7789352	7789778	427	181	91	0.856353591160221	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	25	0	170	1	0	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8022317-8022743	Cluster_4658	Pocillopora_meandrina_HIv1___Sc0000015	8022317	8022743	427	200	99	0.86	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	27	1	186	1	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8038314-8038740	Cluster_4659	Pocillopora_meandrina_HIv1___Sc0000015	8038314	8038740	427	189	98	0.873015873015873	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	18	0	174	1	0	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8138598-8139026	Cluster_4660	Pocillopora_meandrina_HIv1___Sc0000015	8138598	8139026	429	178	74	1.0	+	GAAGAGUUGAGUAGGAUGUUGAACGAAGA	30	9	160	5	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8146443-8146854	Cluster_4661	Pocillopora_meandrina_HIv1___Sc0000015	8146443	8146854	412	254	192	0.9960629921259843	+	GGGUUGAUGCAAACGUGAACUGGUGCU	6	81	117	14	16	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8253460-8253904	Cluster_4662	Pocillopora_meandrina_HIv1___Sc0000015	8253460	8253904	445	428	138	0.9766355140186916	+	UACGGUAUUUGAGACGCAAUAUGACUCGC	37	9	404	3	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8262262-8262689	Cluster_4663	Pocillopora_meandrina_HIv1___Sc0000015	8262262	8262689	428	207	90	0.9951690821256038	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	26	4	194	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8263467-8263913	Cluster_4664	Pocillopora_meandrina_HIv1___Sc0000015	8263467	8263913	447	352	151	0.7840909090909091	.	UCUUGUCUUAAAUUCUGAAUUCUCACUUC	66	11	319	2	4	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8294636-8295050	Cluster_4665	Pocillopora_meandrina_HIv1___Sc0000015	8294636	8295050	415	183	16	0.994535519125683	+	AGUGUGCUCUUGACU	136	182	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8339361-8339960	Cluster_4666	Pocillopora_meandrina_HIv1___Sc0000015	8339361	8339960	600	5943	1147	0.9994952044422009	+	UGCCCAGUGACGAUAAAGAUGA	295	2189	1417	433	698	477	729	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8387393-8387801	Cluster_4667	Pocillopora_meandrina_HIv1___Sc0000015	8387393	8387801	409	205	151	0.00975609756097561	-	UUAGAUCGAUGACGUGCCC	6	69	80	19	16	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8497462-8497984	Cluster_4668	Pocillopora_meandrina_HIv1___Sc0000015	8497462	8497984	523	1322	411	0.0	-	GGCCAAAGUGAUAACGCUUAUACUCUGAUG	117	254	764	90	74	72	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8498175-8498704	Cluster_4669	Pocillopora_meandrina_HIv1___Sc0000015	8498175	8498704	530	961	356	0.001040582726326743	-	GAUAAAAAAUAAAGUCUGACACUG	149	364	227	70	78	49	173	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8500922-8501444	Cluster_4670	Pocillopora_meandrina_HIv1___Sc0000015	8500922	8501444	523	970	329	0.003092783505154639	-	GAUAAAAUUGCAAGUCUGAUACUGA	91	192	474	75	41	65	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8543212-8543629	Cluster_4671	Pocillopora_meandrina_HIv1___Sc0000015	8543212	8543629	418	115	17	0.9826086956521739	+	UGGCCUGAAAAAAAAAAAAA	15	87	0	14	14	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8630535-8630951	Cluster_4672	Pocillopora_meandrina_HIv1___Sc0000015	8630535	8630951	417	117	30	0.7606837606837606	.	CUUAACUGAGUGUCUAU	84	99	8	1	1	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8687559-8687991	Cluster_4673	Pocillopora_meandrina_HIv1___Sc0000015	8687559	8687991	433	485695	857	2.0589052800625906e-06	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	188195	22	484922	9	22	41	679	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8753275-8753749	Cluster_4674	Pocillopora_meandrina_HIv1___Sc0000015	8753275	8753749	475	4963	393	0.00020149103364900262	-	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	1442	207	3726	452	408	124	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8753833-8754253	Cluster_4675	Pocillopora_meandrina_HIv1___Sc0000015	8753833	8754253	421	152	65	0.019736842105263157	-	CCGGUGUGGGAACCG	31	79	59	10	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8756244-8756664	Cluster_4676	Pocillopora_meandrina_HIv1___Sc0000015	8756244	8756664	421	310	18	1.0	+	UCGACUCCCGGUAUGGGAACA	268	1	4	280	16	8	1	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8783889-8784306	Cluster_4677	Pocillopora_meandrina_HIv1___Sc0000015	8783889	8784306	418	232	12	0.004310344827586207	-	CGGCCUGAAAAAAAAAA	107	231	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8809819-8810235	Cluster_4678	Pocillopora_meandrina_HIv1___Sc0000015	8809819	8810235	417	335	15	0.9970149253731343	+	UAGAAUGUUUACUCGUG	200	335	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8850227-8850641	Cluster_4679	Pocillopora_meandrina_HIv1___Sc0000015	8850227	8850641	415	197	15	0.050761421319796954	-	UCUGGAGUCUCGGCA	181	193	2	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8855523-8855937	Cluster_4680	Pocillopora_meandrina_HIv1___Sc0000015	8855523	8855937	415	118	92	0.0	-	GGAUUCUACUGUAGCUCCGUAAGUGCU	3	37	48	6	14	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8957311-8957726	Cluster_4681	Pocillopora_meandrina_HIv1___Sc0000015	8957311	8957726	416	384	7	0.0	-	UGUAUCCCAACCAAGC	333	383	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9017659-9018085	Cluster_4682	Pocillopora_meandrina_HIv1___Sc0000015	9017659	9018085	427	439	65	1.0	+	GGGGGCAUAGCUCAGUGGUAGAGCAUU	201	17	358	16	20	5	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9071577-9072007	Cluster_4683	Pocillopora_meandrina_HIv1___Sc0000015	9071577	9072007	431	77012	298	0.9999480600425907	+	GCACUGGUGGUUCAGUGGUAGAAUUCU	48290	39	76288	4	15	35	631	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9072831-9073262	Cluster_4684	Pocillopora_meandrina_HIv1___Sc0000015	9072831	9073262	432	555987	911	1.0	+	GCACUGGUGGUUCAGUGGUAGAAUUCUCGCC	155951	84	554712	16	56	87	1032	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9225606-9226032	Cluster_4685	Pocillopora_meandrina_HIv1___Sc0000015	9225606	9226032	427	412	309	0.0024271844660194173	-	AGAAAGUAGAAAAGGAAAUUCGUCGUUGGCU	8	149	162	22	37	16	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9227729-9228147	Cluster_4686	Pocillopora_meandrina_HIv1___Sc0000015	9227729	9228147	419	161	116	0.018633540372670808	-	GAAGGGUCUUGUGCUGAGCA	8	65	41	24	11	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:129098-129526	Cluster_4687	Pocillopora_meandrina_HIv1___Sc0000016	129098	129526	429	134	28	0.9925373134328358	+	UGAGACCUGUCUGCAUUGAGCUUUAGUGU	83	7	125	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:166043-166473	Cluster_4688	Pocillopora_meandrina_HIv1___Sc0000016	166043	166473	431	132	39	0.9924242424242424	+	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	61	2	129	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:302160-302585	Cluster_4689	Pocillopora_meandrina_HIv1___Sc0000016	302160	302585	426	100	27	0.99	+	UGUGUAGAUAUGUCUUUUGGACAGGA	34	0	99	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:303144-303770	Cluster_4690	Pocillopora_meandrina_HIv1___Sc0000016	303144	303770	627	1373	426	0.8885651857246905	+	UGACGAUUGGUGUGAGUAGCUCAGCAC	93	10	1246	8	6	22	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:331685-332113	Cluster_4691	Pocillopora_meandrina_HIv1___Sc0000016	331685	332113	429	304	63	1.0	+	UGGAAUUCGAAGCAAGUAACAAUCGACA	94	1	299	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:336418-336853	Cluster_4692	Pocillopora_meandrina_HIv1___Sc0000016	336418	336853	436	399	168	0.9899749373433584	+	UGACUUGACUGGAACCACUUCUGGCCA	23	3	392	2	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:336918-337344	Cluster_4693	Pocillopora_meandrina_HIv1___Sc0000016	336918	337344	427	305	128	0.9737704918032787	+	UAGGUAAUGGCACAAACUGAGAGGCGU	32	2	291	0	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:337943-338729	Cluster_4694	Pocillopora_meandrina_HIv1___Sc0000016	337943	338729	787	534	316	0.9325842696629213	+	UGCAAGAAGUACUGGGUUCACUGAGACC	20	2	505	3	3	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:339033-340012	Cluster_4695	Pocillopora_meandrina_HIv1___Sc0000016	339033	340012	980	1775	637	0.9414084507042253	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	98	17	1664	4	10	23	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:357787-358206	Cluster_4696	Pocillopora_meandrina_HIv1___Sc0000016	357787	358206	420	180	130	0.16111111111111112	-	GCUCCCGGUUGGCUUGUUGGCUCAAUU	5	85	39	18	17	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:359791-360218	Cluster_4697	Pocillopora_meandrina_HIv1___Sc0000016	359791	360218	428	87	21	0.9885057471264368	+	UAAGACAUUUCGCAGAUUUUGACACUCGUU	38	3	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:399937-400364	Cluster_4698	Pocillopora_meandrina_HIv1___Sc0000016	399937	400364	428	176	78	0.20454545454545456	.	UCACGGUAGUAGUGUUGUUCAAUAGACUG	26	2	149	0	1	15	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:408747-409166	Cluster_4699	Pocillopora_meandrina_HIv1___Sc0000016	408747	409166	420	390	228	0.5025641025641026	.	UGGAAUAAAGCAACUACGUG	27	276	9	78	24	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:411660-412087	Cluster_4700	Pocillopora_meandrina_HIv1___Sc0000016	411660	412087	428	150	61	0.9866666666666667	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	38	1	144	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:423086-423757	Cluster_4701	Pocillopora_meandrina_HIv1___Sc0000016	423086	423757	672	339	144	0.3746312684365782	.	UGUGAUUUCAACUGUGAGUGUCAGAA	20	8	228	3	7	33	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:429149-429576	Cluster_4702	Pocillopora_meandrina_HIv1___Sc0000016	429149	429576	428	152	64	0.013157894736842105	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	36	6	145	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:430259-430690	Cluster_4703	Pocillopora_meandrina_HIv1___Sc0000016	430259	430690	432	341	150	0.008797653958944282	-	UGACGGCCUUUCAUCUUUGACGCAAUGAUC	22	3	331	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:430801-431229	Cluster_4704	Pocillopora_meandrina_HIv1___Sc0000016	430801	431229	429	122	43	0.03278688524590164	-	CUCUAGCACACUCGCACAAGUUAAAGGCA	27	9	112	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:449295-449715	Cluster_4705	Pocillopora_meandrina_HIv1___Sc0000016	449295	449715	421	185	90	0.016216216216216217	-	UGUAUCUCCAGCGUCUGAACAAGUCAUGU	33	25	139	8	7	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:515713-516351	Cluster_4706	Pocillopora_meandrina_HIv1___Sc0000016	515713	516351	639	440	332	0.9727272727272728	+	GUUGAUCGAGCAUUGCCCCGCGUGACU	7	171	136	25	44	30	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:519563-520144	Cluster_4707	Pocillopora_meandrina_HIv1___Sc0000016	519563	520144	582	418	264	0.9880382775119617	+	AGAGGGGGUAAGAGCGCU	15	158	140	34	27	27	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:700335-700758	Cluster_4708	Pocillopora_meandrina_HIv1___Sc0000016	700335	700758	424	84	29	0.25	.	UUGGCACGUGUUGUUCCACAAAGAUAGAGU	38	1	81	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:703480-703895	Cluster_4709	Pocillopora_meandrina_HIv1___Sc0000016	703480	703895	416	456	34	0.9956140350877193	+	AAGUGUGCUCUUAACC	186	438	2	2	10	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:705711-706139	Cluster_4710	Pocillopora_meandrina_HIv1___Sc0000016	705711	706139	429	188	35	0.02127659574468085	-	UACCAUAGAACUCACUUGAACAUUUCAUC	57	3	181	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:786273-786694	Cluster_4711	Pocillopora_meandrina_HIv1___Sc0000016	786273	786694	422	986	50	0.9979716024340771	+	UCUGACGAGGGGCUGACACUCA	391	44	0	488	438	9	7	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:792208-792630	Cluster_4712	Pocillopora_meandrina_HIv1___Sc0000016	792208	792630	423	86	32	0.05813953488372093	-	UGUGUAGAUAUGUCUUUUGGACAGGA	27	3	81	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:911271-911685	Cluster_4713	Pocillopora_meandrina_HIv1___Sc0000016	911271	911685	415	925	9	1.0	+	CGGCCUGAAAAAAAA	902	925	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1497797-1498305	Cluster_4714	Pocillopora_meandrina_HIv1___Sc0000016	1497797	1498305	509	2179	249	0.04910509407985315	-	UGAGACAGUACACACGAUUUGAUAU	527	13	2118	1	4	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1506420-1506847	Cluster_4715	Pocillopora_meandrina_HIv1___Sc0000016	1506420	1506847	428	211	88	0.95260663507109	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	93	3	203	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1508602-1509287	Cluster_4716	Pocillopora_meandrina_HIv1___Sc0000016	1508602	1509287	686	426	237	0.7652582159624414	.	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	35	4	350	2	3	17	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1509436-1510523	Cluster_4717	Pocillopora_meandrina_HIv1___Sc0000016	1509436	1510523	1088	1220	511	0.8377049180327869	+	UGAUGACUUUGGACUGAAACCAUGAACA	133	19	1081	5	25	27	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1528767-1529419	Cluster_4718	Pocillopora_meandrina_HIv1___Sc0000016	1528767	1529419	653	684	247	0.05847953216374269	-	UAAUGACUUCAGAGUAGACAGAGACGGU	93	6	653	2	2	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1530112-1530550	Cluster_4719	Pocillopora_meandrina_HIv1___Sc0000016	1530112	1530550	439	317	137	0.38170347003154576	.	AUAUCCUACAUCUUGUUCAGACGCUGACU	37	6	278	2	2	8	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1542070-1542496	Cluster_4720	Pocillopora_meandrina_HIv1___Sc0000016	1542070	1542496	427	88	22	1.0	+	AGGAUGGACUGUGUUCCAGAGGAGACUG	28	3	76	0	9	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1564855-1565893	Cluster_4721	Pocillopora_meandrina_HIv1___Sc0000016	1564855	1565893	1039	1263	602	0.6405384006334125	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	64	35	1101	15	16	28	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1567184-1567608	Cluster_4722	Pocillopora_meandrina_HIv1___Sc0000016	1567184	1567608	425	264	140	0.13636363636363635	-	CUUGGAUUGAUGCAGAAGUUAACA	22	2	224	6	2	3	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1961743-1963021	Cluster_4723	Pocillopora_meandrina_HIv1___Sc0000016	1961743	1963021	1279	4145	1226	0.4965018094089264	.	UGAACCAGGAACACUUCGAGCUUUGAUU	213	96	3729	50	39	50	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1963372-1964203	Cluster_4724	Pocillopora_meandrina_HIv1___Sc0000016	1963372	1964203	832	4276	900	0.7425163704396632	.	UGUGACUGAAAAGAUCUUGAAAGAACUUA	448	93	3764	33	33	83	270	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1964293-1964722	Cluster_4725	Pocillopora_meandrina_HIv1___Sc0000016	1964293	1964722	430	413	93	0.9443099273607748	+	AAACAGAAGACAAAGAUUGUUGAGACAGA	208	0	405	0	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1973704-1974132	Cluster_4726	Pocillopora_meandrina_HIv1___Sc0000016	1973704	1974132	429	137	44	0.0072992700729927005	-	UGAACGUCUGUGAGCGUCUGUACGCUUAUU	61	2	133	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1975076-1975490	Cluster_4727	Pocillopora_meandrina_HIv1___Sc0000016	1975076	1975490	415	147	68	0.006802721088435374	-	UGUUAACUCACCAUCUAAAACGAAUAGAUU	16	2	144	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1979755-1980183	Cluster_4728	Pocillopora_meandrina_HIv1___Sc0000016	1979755	1980183	429	147	32	0.0	-	UGUUUCAAAGGGAUUCAGUAAGAUUAAUA	77	10	134	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1980879-1982515	Cluster_4729	Pocillopora_meandrina_HIv1___Sc0000016	1980879	1982515	1637	3906	1052	0.029185867895545316	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	252	29	3723	11	37	49	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1983933-1984362	Cluster_4730	Pocillopora_meandrina_HIv1___Sc0000016	1983933	1984362	430	226	116	0.008849557522123894	-	UGCACCGGUCUUUUUCGAGUCACUGACUUUU	26	7	215	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1985561-1987066	Cluster_4731	Pocillopora_meandrina_HIv1___Sc0000016	1985561	1987066	1506	9133	1474	0.0917551735464798	-	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCG	592	94	8464	53	44	95	383	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1987515-1988161	Cluster_4732	Pocillopora_meandrina_HIv1___Sc0000016	1987515	1988161	647	320	136	0.075	-	UUCUUCAUUGCUUUAGUCACAGACUUU	45	5	301	1	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1988558-1988986	Cluster_4733	Pocillopora_meandrina_HIv1___Sc0000016	1988558	1988986	429	1248	130	0.02403846153846154	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	738	3	1221	1	3	2	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1992010-1992438	Cluster_4734	Pocillopora_meandrina_HIv1___Sc0000016	1992010	1992438	429	112	41	0.017857142857142856	-	UGCCAUCUUGAAGAUCUGUGUGCACCAUC	55	2	103	1	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1992666-1994013	Cluster_4735	Pocillopora_meandrina_HIv1___Sc0000016	1992666	1994013	1348	11902	1521	0.019576541757687783	-	UGUAACAUUUUGCAUCGAUCGACGGUACA	1365	82	11489	112	26	49	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1994460-1994868	Cluster_4736	Pocillopora_meandrina_HIv1___Sc0000016	1994460	1994868	409	236	120	0.03389830508474576	-	UAGCACAUCAAGGCAGUCAAAGAACUAGUC	29	3	220	2	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1995076-1995817	Cluster_4737	Pocillopora_meandrina_HIv1___Sc0000016	1995076	1995817	742	1181	307	0.000846740050804403	-	ACGGCAACUUCUCAUCUGUAACCUGCAC	189	10	1126	7	2	3	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1997344-1997863	Cluster_4738	Pocillopora_meandrina_HIv1___Sc0000016	1997344	1997863	520	567	285	0.05291005291005291	-	UCGGUGACGAAGGUAAAUAACUAAUGACGU	60	36	510	5	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1998333-1999692	Cluster_4739	Pocillopora_meandrina_HIv1___Sc0000016	1998333	1999692	1360	18091	1546	0.04593444254048975	-	UCUGCCGGGAGCUUCUUGUAGAAGACGG	1144	127	16859	55	61	287	702	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1999773-2000611	Cluster_4740	Pocillopora_meandrina_HIv1___Sc0000016	1999773	2000611	839	550	250	0.005454545454545455	-	UGAUUAUCCGUCUUGGUUAGAAGUUUGCC	34	18	511	3	5	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2000859-2002047	Cluster_4741	Pocillopora_meandrina_HIv1___Sc0000016	2000859	2002047	1189	1051	417	0.004757373929590866	-	UUUCCAACAUCUGCAGGCGAGACUGC	52	31	993	4	6	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2004356-2005245	Cluster_4742	Pocillopora_meandrina_HIv1___Sc0000016	2004356	2005245	890	1443	469	0.001386001386001386	-	UGAGAACUGCUGAUUGGGCUACAAGAUCGC	147	23	1221	4	12	170	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2005478-2006328	Cluster_4743	Pocillopora_meandrina_HIv1___Sc0000016	2005478	2006328	851	3285	324	0.4785388127853881	.	GAUUGGAACAGUCAUCAGACGGGUGGACA	397	378	2790	5	22	36	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2007745-2008172	Cluster_4744	Pocillopora_meandrina_HIv1___Sc0000016	2007745	2008172	428	201	68	0.014925373134328358	-	UGCUGAACAUUGCUCUUCUAAGAAGAUGAC	46	2	180	3	1	13	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2009468-2010179	Cluster_4745	Pocillopora_meandrina_HIv1___Sc0000016	2009468	2010179	712	1497	378	0.2511690046760187	.	UUUCCGUUGCAUUAGAGGACUUCUUGUC	188	26	1285	22	12	19	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2010241-2010664	Cluster_4746	Pocillopora_meandrina_HIv1___Sc0000016	2010241	2010664	424	157	60	0.8471337579617835	+	UUUCUUCGAAAACGUGGCAAUCCG	27	3	87	3	10	12	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2011231-2011657	Cluster_4747	Pocillopora_meandrina_HIv1___Sc0000016	2011231	2011657	427	173	83	0.5722543352601156	.	GUGGAGUUAAUCGUAAGGGAACA	18	2	133	3	0	28	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2011707-2012152	Cluster_4748	Pocillopora_meandrina_HIv1___Sc0000016	2011707	2012152	446	2010	168	0.18009950248756218	-	UGCGAUAAUAAAAUUCCAGGACUUUCCAGG	390	2	1790	4	10	63	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2012397-2013719	Cluster_4749	Pocillopora_meandrina_HIv1___Sc0000016	2012397	2013719	1323	1582	719	0.06447534766118837	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	35	20	1476	9	6	13	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2014002-2014751	Cluster_4750	Pocillopora_meandrina_HIv1___Sc0000016	2014002	2014751	750	784	267	0.03316326530612245	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	81	6	758	3	1	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2015470-2015897	Cluster_4751	Pocillopora_meandrina_HIv1___Sc0000016	2015470	2015897	428	108	9	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	74	0	107	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2018256-2019743	Cluster_4752	Pocillopora_meandrina_HIv1___Sc0000016	2018256	2019743	1488	3988	1318	0.10606820461384152	-	UAGCGGUAUUUUCUUCAAUAGUAAGGU	149	81	3525	28	33	163	158	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2019759-2020804	Cluster_4753	Pocillopora_meandrina_HIv1___Sc0000016	2019759	2020804	1046	2542	796	0.07002360346184107	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	257	68	2334	10	24	40	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2021407-2022449	Cluster_4754	Pocillopora_meandrina_HIv1___Sc0000016	2021407	2022449	1043	1053	407	0.30484330484330485	.	CAACUUCGCAAAGACCUGACAAGA	59	24	840	60	3	29	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2028106-2028519	Cluster_4755	Pocillopora_meandrina_HIv1___Sc0000016	2028106	2028519	414	85	51	1.0	+	AAAGGUAACUACUGUAGGCU	9	37	22	18	5	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2030384-2031292	Cluster_4756	Pocillopora_meandrina_HIv1___Sc0000016	2030384	2031292	909	1401	561	0.06995003568879372	-	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	40	9	1352	5	7	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2031516-2031916	Cluster_4757	Pocillopora_meandrina_HIv1___Sc0000016	2031516	2031916	401	190	113	0.02631578947368421	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	14	3	181	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2032248-2032676	Cluster_4758	Pocillopora_meandrina_HIv1___Sc0000016	2032248	2032676	429	315	122	0.0761904761904762	-	UACGUGUAGAAAGCCUUCUCUGACAUC	30	2	292	3	1	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2047356-2048281	Cluster_4759	Pocillopora_meandrina_HIv1___Sc0000016	2047356	2048281	926	6919	896	0.7369562075444428	.	UGUGAUUGCAUGGCUGGUCUUGGAGAGAGC	1067	140	5765	78	70	258	608	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2049709-2052600	Cluster_4760	Pocillopora_meandrina_HIv1___Sc0000016	2049709	2052600	2892	31442	5594	0.01090897525602697	-	UGGUCUCACGAACUUCUUUUUUUCAAGA	1460	276	30365	159	84	230	328	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2052862-2053462	Cluster_4761	Pocillopora_meandrina_HIv1___Sc0000016	2052862	2053462	601	1998	480	0.34134134134134136	.	CGUACCUAAAUCUGUGAAUCCUGAACUUCC	135	119	1767	10	17	40	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2054561-2055417	Cluster_4762	Pocillopora_meandrina_HIv1___Sc0000016	2054561	2055417	857	644	200	0.6242236024844721	.	UCACGAUUUUGAAUGGUAUGGGCA	101	37	442	3	6	31	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2057549-2059148	Cluster_4763	Pocillopora_meandrina_HIv1___Sc0000016	2057549	2059148	1600	1329	511	0.056433408577878104	-	UCCGAGAAGCUGAUUUCUGGACCAGUA	54	60	1245	4	6	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2059179-2059855	Cluster_4764	Pocillopora_meandrina_HIv1___Sc0000016	2059179	2059855	677	375	179	0.016	-	UGAUCAAGGAGCUCUUUAGCUUUAACCCU	26	8	354	2	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2059892-2060338	Cluster_4765	Pocillopora_meandrina_HIv1___Sc0000016	2059892	2060338	447	461	205	0.03470715835140998	-	UGUGCCAUCCAAGGUCUUGAAGGAUUUGAU	32	21	433	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2060396-2060823	Cluster_4766	Pocillopora_meandrina_HIv1___Sc0000016	2060396	2060823	428	256	107	0.01171875	-	UGCAUUUUUCCGAUAUAGAGCUGGACGU	46	3	248	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2061622-2062935	Cluster_4767	Pocillopora_meandrina_HIv1___Sc0000016	2061622	2062935	1314	7408	1597	0.007964362850971922	-	UGUGCAUUCAGGUUUGUCAUUGUCAAUAAC	535	68	6988	22	100	156	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2062993-2064048	Cluster_4768	Pocillopora_meandrina_HIv1___Sc0000016	2062993	2064048	1056	1969	691	0.018283392585068562	-	UGGGAACAUCUUUGAAGUCAUUUUUAUG	77	47	1822	10	21	32	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2064706-2065899	Cluster_4769	Pocillopora_meandrina_HIv1___Sc0000016	2064706	2065899	1194	3251	896	0.25069209474008	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	531	37	2908	18	146	50	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2067316-2069298	Cluster_4770	Pocillopora_meandrina_HIv1___Sc0000016	2067316	2069298	1983	4657	1493	0.7741035001073653	.	UUACGAAAUAUCUGAUGGCUGAUC	217	81	3906	40	37	141	452	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2069354-2070004	Cluster_4771	Pocillopora_meandrina_HIv1___Sc0000016	2069354	2070004	651	2505	484	0.03313373253493014	-	UGUUUCAAAGAAAGUCACUAAGACUGAGA	244	42	2406	3	19	24	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2070376-2070801	Cluster_4772	Pocillopora_meandrina_HIv1___Sc0000016	2070376	2070801	426	162	81	0.024691358024691357	-	UCACAUGUAGGUACCAGAUCUCUUCAAAG	17	3	152	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2071265-2073716	Cluster_4773	Pocillopora_meandrina_HIv1___Sc0000016	2071265	2073716	2452	11991	3015	0.0417813360020015	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	493	157	10975	74	84	175	526	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2074388-2074816	Cluster_4774	Pocillopora_meandrina_HIv1___Sc0000016	2074388	2074816	429	379	181	0.19261213720316622	-	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	86	3	341	2	10	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2075275-2075720	Cluster_4775	Pocillopora_meandrina_HIv1___Sc0000016	2075275	2075720	446	312	115	0.02564102564102564	-	UCCGACUUAUUAUAAUUCUUGAAAGACUGA	25	3	301	3	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2076668-2077241	Cluster_4776	Pocillopora_meandrina_HIv1___Sc0000016	2076668	2077241	574	2566	310	0.0074045206547155105	-	UGUUUCUUUUUAAGUCUAUGUAAGUCCACU	712	25	2488	13	14	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2077641-2078049	Cluster_4777	Pocillopora_meandrina_HIv1___Sc0000016	2077641	2078049	409	162	89	0.4444444444444444	.	AGCCAACUCGAACGU	20	72	90	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2078691-2079490	Cluster_4778	Pocillopora_meandrina_HIv1___Sc0000016	2078691	2079490	800	361	211	0.06371191135734072	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	12	4	339	4	0	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2081725-2082293	Cluster_4779	Pocillopora_meandrina_HIv1___Sc0000016	2081725	2082293	569	5874	534	0.009874021109976166	-	UGUCAAAUUCUCAUCUUCCUAAGCUUU	1183	73	5695	46	11	12	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2083081-2083505	Cluster_4780	Pocillopora_meandrina_HIv1___Sc0000016	2083081	2083505	425	210	83	0.22380952380952382	.	UCAGCAAAAAUUGAUCAACAUUCCUACUUU	25	2	161	1	5	2	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2083699-2084123	Cluster_4781	Pocillopora_meandrina_HIv1___Sc0000016	2083699	2084123	425	158	66	0.08860759493670886	-	UCCAUAACUAUUUCUUGUUCCAGCU	22	4	145	0	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2086534-2086961	Cluster_4782	Pocillopora_meandrina_HIv1___Sc0000016	2086534	2086961	428	158	64	0.02531645569620253	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	33	0	147	0	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2087546-2088032	Cluster_4783	Pocillopora_meandrina_HIv1___Sc0000016	2087546	2088032	487	3453	360	0.0	-	UUCCUGCAGAUAUUUGAGCCAGAUAU	408	359	2780	19	15	37	243	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2088102-2089069	Cluster_4784	Pocillopora_meandrina_HIv1___Sc0000016	2088102	2089069	968	2540	435	0.0015748031496062992	-	UAAACCUCUUGGCAAUAUAAGAUAACUCA	493	24	2482	6	7	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2089563-2090649	Cluster_4785	Pocillopora_meandrina_HIv1___Sc0000016	2089563	2090649	1087	817	358	0.0036719706242350062	-	UUUUGCUUCUCCAGCUGUAGUUCUUGG	45	39	764	5	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2090934-2091801	Cluster_4786	Pocillopora_meandrina_HIv1___Sc0000016	2090934	2091801	868	2382	257	0.005877413937867338	-	UAGGGUGCAACACCAUCUGUAUUGAAUGAG	614	10	2357	0	5	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2098714-2100470	Cluster_4787	Pocillopora_meandrina_HIv1___Sc0000016	2098714	2100470	1757	3441	858	0.003777971519907004	-	UACAAGGCCAUCUAAAAUAGAAUCAAU	401	44	3319	6	7	43	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2100713-2101564	Cluster_4788	Pocillopora_meandrina_HIv1___Sc0000016	2100713	2101564	852	3598	610	0.0013896609227348527	-	UGACAUCAGCUCUGUGACUCUUUUGG	541	37	3301	4	17	85	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2101591-2102134	Cluster_4789	Pocillopora_meandrina_HIv1___Sc0000016	2101591	2102134	544	664	187	0.0015060240963855422	-	UCCUAGAUGUAUGAUGACUGAGCAUUUCAU	34	14	610	1	4	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2108815-2109222	Cluster_4790	Pocillopora_meandrina_HIv1___Sc0000016	2108815	2109222	408	87	41	0.0	-	UGUGAACUUCUUUCUGACCUGUGAAUGC	13	1	85	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2109276-2109705	Cluster_4791	Pocillopora_meandrina_HIv1___Sc0000016	2109276	2109705	430	101	30	0.0	-	UGAUUUAAAGUUACUGUAUGAGCUAGCUGU	45	1	98	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2155127-2155546	Cluster_4792	Pocillopora_meandrina_HIv1___Sc0000016	2155127	2155546	420	144	78	0.8958333333333334	+	UUUGAUCGGUUUUGGCGUGU	24	92	5	41	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2330302-2330729	Cluster_4793	Pocillopora_meandrina_HIv1___Sc0000016	2330302	2330729	428	89	27	0.9887640449438202	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	35	1	86	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2345038-2345465	Cluster_4794	Pocillopora_meandrina_HIv1___Sc0000016	2345038	2345465	428	101	16	0.019801980198019802	-	AACUACUGCUCGUGCUCUAGAUAUGACA	71	1	97	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2383238-2383667	Cluster_4795	Pocillopora_meandrina_HIv1___Sc0000016	2383238	2383667	430	323	131	0.7213622291021672	.	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	84	49	251	11	4	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2403204-2403628	Cluster_4796	Pocillopora_meandrina_HIv1___Sc0000016	2403204	2403628	425	84	29	0.023809523809523808	-	UGUGUAGAUAUGUCUUUUGGACAGGA	22	1	83	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2457237-2457651	Cluster_4797	Pocillopora_meandrina_HIv1___Sc0000016	2457237	2457651	415	76	5	0.02631578947368421	-	CCGGACUGUUACAGCU	69	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2542146-2542562	Cluster_4798	Pocillopora_meandrina_HIv1___Sc0000016	2542146	2542562	417	395	17	0.005063291139240506	-	CGGCCUGAAAAAAAAAA	343	389	3	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2746694-2747109	Cluster_4799	Pocillopora_meandrina_HIv1___Sc0000016	2746694	2747109	416	165	38	0.9939393939393939	+	CAGCGUGGGUCGGAA	47	164	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2869347-2869910	Cluster_4800	Pocillopora_meandrina_HIv1___Sc0000016	2869347	2869910	564	557	357	0.9784560143626571	+	UUUUGAACAGGAUCGAGGCU	9	167	261	37	29	23	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2977687-2978110	Cluster_4801	Pocillopora_meandrina_HIv1___Sc0000016	2977687	2978110	424	105	41	0.0	-	ACUGAGAUUCUGGCUGGAUUGUUCC	16	4	88	0	1	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2998303-2998837	Cluster_4802	Pocillopora_meandrina_HIv1___Sc0000016	2998303	2998837	535	914	403	0.0010940919037199124	-	UAGGUCUGAUGCUGAAUAGGUUGUCACAAUU	83	319	443	25	50	42	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3036411-3036839	Cluster_4803	Pocillopora_meandrina_HIv1___Sc0000016	3036411	3036839	429	280	136	0.425	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	48	19	241	3	4	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3090988-3091978	Cluster_4804	Pocillopora_meandrina_HIv1___Sc0000016	3090988	3091978	991	1581	557	0.8905755850727388	+	UUUGCUGAGAUACAUUUUCCUUCUGA	61	12	1401	2	16	63	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3094680-3095109	Cluster_4805	Pocillopora_meandrina_HIv1___Sc0000016	3094680	3095109	430	201	79	0.945273631840796	+	UAAUCCCAGGUCUUGUAUUGUAAUACUUCA	73	0	194	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3210812-3211240	Cluster_4806	Pocillopora_meandrina_HIv1___Sc0000016	3210812	3211240	429	1038	129	0.9759152215799615	+	UUCAGAUAUUUCAGCUGCGAGAUUGA	463	7	1021	0	4	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3211324-3212437	Cluster_4807	Pocillopora_meandrina_HIv1___Sc0000016	3211324	3212437	1114	3500	781	0.878	+	UAAUGUGAAUUUUUGGAUCAUUGGUUGGG	161	114	2972	63	62	145	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3214743-3215181	Cluster_4808	Pocillopora_meandrina_HIv1___Sc0000016	3214743	3215181	439	231	92	0.017316017316017316	-	UGACAUUGUUCCUUCAACUGUUUUUUGAC	34	2	227	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3215721-3216149	Cluster_4809	Pocillopora_meandrina_HIv1___Sc0000016	3215721	3216149	429	159	33	0.0	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	80	1	157	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3276360-3276777	Cluster_4810	Pocillopora_meandrina_HIv1___Sc0000016	3276360	3276777	418	103	3	0.0	-	AAGGUGAACAAAGCGAUA	88	103	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3425021-3425524	Cluster_4811	Pocillopora_meandrina_HIv1___Sc0000016	3425021	3425524	504	1934	192	0.008790072388831437	-	AGGAUGGACAGUGAUCCAGAAGAGGACGGA	668	128	1680	17	88	15	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3486771-3487189	Cluster_4812	Pocillopora_meandrina_HIv1___Sc0000016	3486771	3487189	419	107	23	0.9906542056074766	+	CGGCCUGAAAAAAAAAAAA	28	71	21	5	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3529474-3529903	Cluster_4813	Pocillopora_meandrina_HIv1___Sc0000016	3529474	3529903	430	361	114	0.8337950138504155	+	GGGAUGGACAGUGAUCCAGAAGAGAAUGGA	49	20	283	38	15	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3635522-3635950	Cluster_4814	Pocillopora_meandrina_HIv1___Sc0000016	3635522	3635950	429	121	49	0.9834710743801653	+	AUGGACAGUGAUCCAGAAGAGAAUGGAUG	21	4	105	6	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3640174-3640599	Cluster_4815	Pocillopora_meandrina_HIv1___Sc0000016	3640174	3640599	426	99	31	0.0	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	25	0	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3672284-3672777	Cluster_4816	Pocillopora_meandrina_HIv1___Sc0000016	3672284	3672777	494	237	109	0.7805907172995781	.	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	49	37	168	18	8	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3736896-3737393	Cluster_4817	Pocillopora_meandrina_HIv1___Sc0000016	3736896	3737393	498	438	164	0.01598173515981735	-	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	54	88	271	19	17	26	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3786097-3786594	Cluster_4818	Pocillopora_meandrina_HIv1___Sc0000016	3786097	3786594	498	290	107	0.8862068965517241	+	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	67	17	257	9	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3853179-3853635	Cluster_4819	Pocillopora_meandrina_HIv1___Sc0000016	3853179	3853635	457	409	176	0.8019559902200489	+	UGAAGAGUAUCACGAUUUCUGUCCACAAUGC	37	11	362	5	8	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3853803-3854402	Cluster_4820	Pocillopora_meandrina_HIv1___Sc0000016	3853803	3854402	600	1269	367	0.7415287628053585	.	UUUGACGGAAACAGUUAUGGACGGAUCC	61	17	964	35	35	111	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3877358-3877856	Cluster_4821	Pocillopora_meandrina_HIv1___Sc0000016	3877358	3877856	499	283	118	0.0035335689045936395	-	GGGAUGGACAGUGAUCCAGGAGAAAAUGG	32	63	177	16	8	15	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3880780-3881525	Cluster_4822	Pocillopora_meandrina_HIv1___Sc0000016	3880780	3881525	746	2122	592	0.10037700282752121	-	UCAUCUGGUGUGAUUGUAUCGUGUGCAC	159	28	1996	7	32	21	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3881973-3882376	Cluster_4823	Pocillopora_meandrina_HIv1___Sc0000016	3881973	3882376	404	151	81	0.08609271523178808	-	UACUGGAAUAAUAACUUUACGAUCAACA	18	1	146	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3882866-3883292	Cluster_4824	Pocillopora_meandrina_HIv1___Sc0000016	3882866	3883292	427	144	81	0.125	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	16	3	124	3	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3884380-3884802	Cluster_4825	Pocillopora_meandrina_HIv1___Sc0000016	3884380	3884802	423	160	87	0.125	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	16	3	141	2	0	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3960711-3961139	Cluster_4826	Pocillopora_meandrina_HIv1___Sc0000016	3960711	3961139	429	203	83	0.812807881773399	+	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	43	17	155	20	6	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3965358-3965785	Cluster_4827	Pocillopora_meandrina_HIv1___Sc0000016	3965358	3965785	428	162	56	0.018518518518518517	-	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	19	28	129	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3984663-3985964	Cluster_4828	Pocillopora_meandrina_HIv1___Sc0000016	3984663	3985964	1302	2628	655	0.9554794520547946	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	219	13	2521	2	22	26	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4504286-4505176	Cluster_4829	Pocillopora_meandrina_HIv1___Sc0000016	4504286	4505176	891	1713	456	0.9369527145359019	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	205	8	1644	7	13	21	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4964957-4965385	Cluster_4830	Pocillopora_meandrina_HIv1___Sc0000016	4964957	4965385	429	161	31	0.11180124223602485	-	AAAUGAAGCUCUCUUUGGUGAAAAUGUUG	60	0	157	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5158486-5158914	Cluster_4831	Pocillopora_meandrina_HIv1___Sc0000016	5158486	5158914	429	285	93	0.0035087719298245615	-	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	60	4	273	0	6	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5159620-5160222	Cluster_4832	Pocillopora_meandrina_HIv1___Sc0000016	5159620	5160222	603	1260	197	0.004761904761904762	-	UCCAAUCCCCACCGAGAAAGUAUUCAAUAUU	491	14	1230	6	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5258006-5258425	Cluster_4833	Pocillopora_meandrina_HIv1___Sc0000016	5258006	5258425	420	288	130	0.006944444444444444	-	GGGGUUGAUGCUGAAUA	22	172	83	7	9	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5309999-5310407	Cluster_4834	Pocillopora_meandrina_HIv1___Sc0000016	5309999	5310407	409	116	62	0.9741379310344828	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	15	0	104	0	7	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5310474-5311519	Cluster_4835	Pocillopora_meandrina_HIv1___Sc0000016	5310474	5311519	1046	2467	711	0.9404134576408594	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	272	55	2290	14	29	30	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5311535-5313022	Cluster_4836	Pocillopora_meandrina_HIv1___Sc0000016	5311535	5313022	1488	3913	1287	0.8998211091234347	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	158	58	3482	28	25	149	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5321552-5321970	Cluster_4837	Pocillopora_meandrina_HIv1___Sc0000016	5321552	5321970	419	210	138	0.9904761904761905	+	CAGUUGAGCUCUGGGAAGCCCA	9	114	38	12	26	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5324506-5325076	Cluster_4838	Pocillopora_meandrina_HIv1___Sc0000016	5324506	5325076	571	461	334	0.9891540130151844	+	CGUGCUAGAGCUGUGUGAGGA	6	200	122	32	47	23	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5325764-5326185	Cluster_4839	Pocillopora_meandrina_HIv1___Sc0000016	5325764	5326185	422	376	269	0.9920212765957447	+	GCCUUGUAGUAAGCAGAUGACA	17	141	115	28	38	24	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5327726-5328223	Cluster_4840	Pocillopora_meandrina_HIv1___Sc0000016	5327726	5328223	498	528	384	0.9753787878787878	+	UCCGUCUGGGGCUGUUUCUGUGAAGAU	6	205	188	42	37	29	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5329153-5329568	Cluster_4841	Pocillopora_meandrina_HIv1___Sc0000016	5329153	5329568	416	229	169	1.0	+	CGUGUACUCGGACUUACAUUCUGCA	8	55	92	26	16	16	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5329740-5330156	Cluster_4842	Pocillopora_meandrina_HIv1___Sc0000016	5329740	5330156	417	271	204	0.996309963099631	+	CCACUGGAGAACUAAACGU	15	123	60	30	28	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5330505-5331187	Cluster_4843	Pocillopora_meandrina_HIv1___Sc0000016	5330505	5331187	683	613	433	0.9967373572593801	+	GCGCAGGCAAGCUGGACU	19	260	180	55	28	52	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5331757-5332175	Cluster_4844	Pocillopora_meandrina_HIv1___Sc0000016	5331757	5332175	419	465	352	0.9935483870967742	+	GAUUCAACAGAACUGCUGA	5	167	145	46	30	48	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5332327-5333037	Cluster_4845	Pocillopora_meandrina_HIv1___Sc0000016	5332327	5333037	711	941	663	0.9946865037194474	+	GAGACUGAAAAAGGACU	16	337	374	71	57	55	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5333537-5334266	Cluster_4846	Pocillopora_meandrina_HIv1___Sc0000016	5333537	5334266	730	965	691	0.9989637305699481	+	CUUCAAGAGGACGUGGAAU	12	298	396	81	73	55	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5334971-5335390	Cluster_4847	Pocillopora_meandrina_HIv1___Sc0000016	5334971	5335390	420	404	294	0.9975247524752475	+	CCCAUAGUUGGAAAUGUAACCGUC	10	150	126	17	27	46	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5335782-5336460	Cluster_4848	Pocillopora_meandrina_HIv1___Sc0000016	5335782	5336460	679	800	607	0.99875	+	AAACAGUUGCGUGCUUUAGAUGUU	6	250	305	68	67	49	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5337453-5337914	Cluster_4849	Pocillopora_meandrina_HIv1___Sc0000016	5337453	5337914	462	543	396	0.9668508287292817	+	UCGUGUUGUAGGCUU	13	190	226	46	24	23	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5338024-5339073	Cluster_4850	Pocillopora_meandrina_HIv1___Sc0000016	5338024	5339073	1050	1232	866	1.0	+	UAAGGCUGUAGUUAUGGCAGAUA	11	399	539	76	73	72	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5339267-5340206	Cluster_4851	Pocillopora_meandrina_HIv1___Sc0000016	5339267	5340206	940	1067	789	0.9962511715089035	+	CUCUAUCCAAACUGUUAAUGCUCCACGAU	34	340	460	70	62	64	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5340853-5341260	Cluster_4852	Pocillopora_meandrina_HIv1___Sc0000016	5340853	5341260	408	375	278	0.9973333333333333	+	GAUAAGCGCUUACAACCUGACUAA	5	132	116	38	27	25	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5341530-5342020	Cluster_4853	Pocillopora_meandrina_HIv1___Sc0000016	5341530	5342020	491	742	500	0.9946091644204852	+	CGACGAGGAUUGCUGAAAGCUAAGA	15	215	304	61	65	45	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5342024-5342789	Cluster_4854	Pocillopora_meandrina_HIv1___Sc0000016	5342024	5342789	766	948	690	0.9873417721518988	+	CUCGGACUAGGAACUACU	9	327	363	65	66	70	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5343093-5343674	Cluster_4855	Pocillopora_meandrina_HIv1___Sc0000016	5343093	5343674	582	550	414	0.990909090909091	+	GGAGAUCGUCUGCGAUGUCGAGCA	10	214	190	43	24	35	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5343803-5344297	Cluster_4856	Pocillopora_meandrina_HIv1___Sc0000016	5343803	5344297	495	429	309	1.0	+	ACAGGGAAUGCGACUCGAGC	7	161	140	42	29	30	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5344478-5344937	Cluster_4857	Pocillopora_meandrina_HIv1___Sc0000016	5344478	5344937	460	646	459	0.9907120743034056	+	GGGGCUUUUGAGCAUCUGAAGUU	8	187	263	50	40	55	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5345593-5346596	Cluster_4858	Pocillopora_meandrina_HIv1___Sc0000016	5345593	5346596	1004	1083	707	0.9990766389658357	+	UUCGAAGAGUAGGCUU	15	351	432	73	77	87	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6063552-6063966	Cluster_4859	Pocillopora_meandrina_HIv1___Sc0000016	6063552	6063966	415	205	8	0.0	-	GAGACUUGAAGCGGA	159	204	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6183757-6184303	Cluster_4860	Pocillopora_meandrina_HIv1___Sc0000016	6183757	6184303	547	232	90	0.22844827586206898	.	UGAUUUCUGAUGGAGACUCUAAGUCUU	27	13	199	1	4	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6353412-6353839	Cluster_4861	Pocillopora_meandrina_HIv1___Sc0000016	6353412	6353839	428	540	49	0.9888888888888889	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	296	5	532	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6523026-6523703	Cluster_4862	Pocillopora_meandrina_HIv1___Sc0000016	6523026	6523703	678	8024	546	0.003115653040877368	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2147	13	7895	7	49	29	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6558914-6563255	Cluster_4863	Pocillopora_meandrina_HIv1___Sc0000016	6558914	6563255	4342	11957	3679	0.08405118340720917	-	UGACUCUUCAAUCUCUGAAACGACUGCUC	501	161	10986	45	64	254	447	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6597189-6597603	Cluster_4864	Pocillopora_meandrina_HIv1___Sc0000016	6597189	6597603	415	156	3	0.0	-	AACUUUUGACGGUGU	154	155	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6721874-6722290	Cluster_4865	Pocillopora_meandrina_HIv1___Sc0000016	6721874	6722290	417	258	2	0.0	-	GAUGGAUGGAGACUGCA	257	258	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6777921-6778641	Cluster_4866	Pocillopora_meandrina_HIv1___Sc0000016	6777921	6778641	721	459	166	0.3769063180827887	.	CAAAGUCUCAAUUACCCACUGUCAUUG	57	26	381	3	6	15	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6879376-6880291	Cluster_4867	Pocillopora_meandrina_HIv1___Sc0000016	6879376	6880291	916	965	245	0.11606217616580311	-	UGUGACAGCUCUUUUCCUCCUGCAAAGA	136	39	812	7	15	65	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6885388-6885814	Cluster_4868	Pocillopora_meandrina_HIv1___Sc0000016	6885388	6885814	427	225	60	0.9066666666666666	+	UUGGAACGUGUUGCUGAACGCUUGCU	45	4	215	2	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6906122-6906540	Cluster_4869	Pocillopora_meandrina_HIv1___Sc0000016	6906122	6906540	419	347	14	0.9971181556195965	+	CAUUAAUGCUGUAGGUGAA	267	346	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6943448-6943855	Cluster_4870	Pocillopora_meandrina_HIv1___Sc0000016	6943448	6943855	408	153	98	0.9934640522875817	+	GCCGCUAGAACCAGGAAGU	7	91	22	11	15	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6944636-6945052	Cluster_4871	Pocillopora_meandrina_HIv1___Sc0000016	6944636	6945052	417	143	103	0.993006993006993	+	GAAAGACAACUGGAACC	5	59	46	15	9	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7074438-7074852	Cluster_4872	Pocillopora_meandrina_HIv1___Sc0000016	7074438	7074852	415	91	22	0.03296703296703297	-	GAGACUUGAAGCGGAU	22	84	3	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7162884-7163339	Cluster_4873	Pocillopora_meandrina_HIv1___Sc0000016	7162884	7163339	456	1761	216	0.08858603066439523	-	UAAGAAAUCUUCCACUGAUCGUUGAGUU	319	4	1674	11	8	13	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7271419-7271841	Cluster_4874	Pocillopora_meandrina_HIv1___Sc0000016	7271419	7271841	423	172	18	0.9883720930232558	+	UGAUCCUAAAGCAUUUUCUGAA	65	3	2	3	73	91	0	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7496676-7497091	Cluster_4875	Pocillopora_meandrina_HIv1___Sc0000016	7496676	7497091	416	150	33	1.0	+	AUCGGCCGUGGAUUGU	85	138	6	3	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7549557-7549654	Cluster_4876	Pocillopora_meandrina_HIv1___Sc0000016	7549557	7549654	98	19375	373	0.9999483870967741	+	UCAGUUCCACCAGCUCACCAAU	5425	2372	15	998	8907	7046	37	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7549905-7550358	Cluster_4877	Pocillopora_meandrina_HIv1___Sc0000016	7549905	7550358	454	12085	295	1.0	+	UCAGUUCCACCAGCUCACCAAU	3430	1253	39	947	5195	4505	146	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7550593-7550685	Cluster_4878	Pocillopora_meandrina_HIv1___Sc0000016	7550593	7550685	93	86230	550	0.9999884031079671	+	UCAGUCCCACCAUCUCACCAAU	39229	13030	179	7436	57977	7329	279	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7553282-7553379	Cluster_4879	Pocillopora_meandrina_HIv1___Sc0000016	7553282	7553379	98	5037	257	0.9998014691284495	+	AGGUGAGCUGUGGGAACUCUUA	2451	425	36	763	3209	517	87	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7555639-7555733	Cluster_4880	Pocillopora_meandrina_HIv1___Sc0000016	7555639	7555733	95	15717	320	1.0	+	UCAGUCCCACCAGCUCACCAAU	3732	3519	41	3608	5496	2992	61	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7556180-7556602	Cluster_4881	Pocillopora_meandrina_HIv1___Sc0000016	7556180	7556602	423	669	85	0.9955156950672646	+	UCAGUUCCACCAGCUCACCAAU	172	95	24	32	276	236	6	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7702668-7703257	Cluster_4882	Pocillopora_meandrina_HIv1___Sc0000016	7702668	7703257	590	2591	198	0.028174450019297567	-	UCGGACUGUGCAUAACCAUUUGCAAAC	1280	148	2256	4	1	74	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7726812-7727228	Cluster_4883	Pocillopora_meandrina_HIv1___Sc0000016	7726812	7727228	417	215	13	1.0	+	UUCCGAAGUCGCGGUC	69	215	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7737324-7737739	Cluster_4884	Pocillopora_meandrina_HIv1___Sc0000016	7737324	7737739	416	115	37	0.9739130434782609	+	GGAGGGGGAGAGCUCUCUUG	37	104	4	4	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7918333-7918749	Cluster_4885	Pocillopora_meandrina_HIv1___Sc0000016	7918333	7918749	417	548	14	0.0	-	AGUGUGCUCUUAACCA	400	542	4	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7925013-7925738	Cluster_4886	Pocillopora_meandrina_HIv1___Sc0000016	7925013	7925738	726	673	212	0.05052005943536404	-	UGAUAAACCUGUAGCUGAAGCUUCUGCA	93	4	634	5	13	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7981204-7981630	Cluster_4887	Pocillopora_meandrina_HIv1___Sc0000016	7981204	7981630	427	87	27	0.0	-	CAGUAUCCUUGUCUUCUGUUGAUGUGUC	21	2	83	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8190428-8190841	Cluster_4888	Pocillopora_meandrina_HIv1___Sc0000016	8190428	8190841	414	202	109	0.9801980198019802	+	UAGGAGACUUUACGCUGCGAACGAGCCUUU	11	4	195	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8193241-8193668	Cluster_4889	Pocillopora_meandrina_HIv1___Sc0000016	8193241	8193668	428	177	83	0.9378531073446328	+	UGAAUGCGUAACAUAACUCCGAUCGAGU	29	2	173	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8243509-8243925	Cluster_4890	Pocillopora_meandrina_HIv1___Sc0000016	8243509	8243925	417	518	19	0.0	-	GAGUGUGCUCUUAACCA	328	517	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8250872-8251332	Cluster_4891	Pocillopora_meandrina_HIv1___Sc0000016	8250872	8251332	461	1055	231	0.04928909952606635	-	UGUAAUCUCAAUAUCUACCUCUUGACA	245	12	1008	4	21	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8251380-8252098	Cluster_4892	Pocillopora_meandrina_HIv1___Sc0000016	8251380	8252098	719	1017	295	0.9193706981317601	+	UCUUCGUUUUGUACAAAUUCCCACCGA	203	8	980	0	5	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8274017-8274445	Cluster_4893	Pocillopora_meandrina_HIv1___Sc0000016	8274017	8274445	429	134	39	0.04477611940298507	-	AUCUAAACGAACUUGUUUUUCUUAUGAGCA	45	1	131	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8355046-8355474	Cluster_4894	Pocillopora_meandrina_HIv1___Sc0000016	8355046	8355474	429	222	56	0.02702702702702703	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	88	0	201	1	1	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8546527-8546951	Cluster_4895	Pocillopora_meandrina_HIv1___Sc0000016	8546527	8546951	425	147	61	0.9319727891156463	+	UAACACAAUGAACCAAGGCACGUCCAGAUA	18	3	135	2	0	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8551184-8552319	Cluster_4896	Pocillopora_meandrina_HIv1___Sc0000016	8551184	8552319	1136	2758	592	0.9216823785351704	+	UAACACAAUGAACCAAGGCACGUCCAGA	472	18	2603	2	12	45	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8637811-8638451	Cluster_4897	Pocillopora_meandrina_HIv1___Sc0000016	8637811	8638451	641	1301	313	0.008455034588777863	-	UAGGCGUAAAUCUUGACUCCGAUCGACUAA	130	9	1269	3	2	2	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8955875-8956296	Cluster_4898	Pocillopora_meandrina_HIv1___Sc0000016	8955875	8956296	422	109	53	0.9724770642201835	+	CAUGUAGUUACUCAGGAAGAAGUC	28	10	42	4	13	3	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:9066858-9067275	Cluster_4899	Pocillopora_meandrina_HIv1___Sc0000016	9066858	9067275	418	377	16	0.002652519893899204	-	AGCUGUGACCCUCGGGC	183	377	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:52305-52730	Cluster_4900	Pocillopora_meandrina_HIv1___Sc0000017	52305	52730	426	106	36	0.9811320754716981	+	UCCGAUUUAAAAGAUUCUUUGUUUGU	30	0	101	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:210371-210799	Cluster_4901	Pocillopora_meandrina_HIv1___Sc0000017	210371	210799	429	464	117	0.9655172413793104	+	UGUAGAAUCAAUCUGUUACUAAGACACC	119	0	447	7	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:281713-282126	Cluster_4902	Pocillopora_meandrina_HIv1___Sc0000017	281713	282126	414	83	12	0.024096385542168676	-	GGUCUGGAGUCUCGGCUU	27	83	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:390054-390665	Cluster_4903	Pocillopora_meandrina_HIv1___Sc0000017	390054	390665	612	593	146	0.5767284991568297	.	UCACUCGUAAAGAAUCGCUCGUAAAUUGAUC	159	17	535	8	7	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:396273-396699	Cluster_4904	Pocillopora_meandrina_HIv1___Sc0000017	396273	396699	427	185	57	0.15675675675675677	-	UGUCAAAUUCUCGUCUUCCUAACCUUU	62	0	179	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:399056-399466	Cluster_4905	Pocillopora_meandrina_HIv1___Sc0000017	399056	399466	411	102	37	0.4803921568627451	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	19	0	101	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:404683-405111	Cluster_4906	Pocillopora_meandrina_HIv1___Sc0000017	404683	405111	429	146	31	0.02054794520547945	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	66	1	145	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:405753-406179	Cluster_4907	Pocillopora_meandrina_HIv1___Sc0000017	405753	406179	427	160	51	0.05625	-	UAAGACCCAUCCAUCACUAUCAACUCG	34	1	158	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:406230-406708	Cluster_4908	Pocillopora_meandrina_HIv1___Sc0000017	406230	406708	479	1777	222	0.0022509848058525606	-	UGGACAAAUUCAUAGGUCUGAUGCAAAC	273	40	1700	4	9	15	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:483166-483771	Cluster_4909	Pocillopora_meandrina_HIv1___Sc0000017	483166	483771	606	1733	290	0.9734564339296018	+	UAGGAACACGAGAAGAUCUAGAAGAAACUCU	274	118	1532	2	30	26	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:484009-484666	Cluster_4910	Pocillopora_meandrina_HIv1___Sc0000017	484009	484666	658	1131	320	0.9168877099911583	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	98	7	1078	4	4	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:484886-485541	Cluster_4911	Pocillopora_meandrina_HIv1___Sc0000017	484886	485541	656	606	312	0.5957095709570958	.	UUAUAUCUCUUAUUCAUCUCUUUCCGG	24	8	539	3	6	18	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:485566-486338	Cluster_4912	Pocillopora_meandrina_HIv1___Sc0000017	485566	486338	773	2499	554	0.9135654261704682	+	UGGAUAUACGUACACAAUCUAGGCUAA	788	20	2402	13	5	17	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:566559-566986	Cluster_4913	Pocillopora_meandrina_HIv1___Sc0000017	566559	566986	428	88	13	0.056818181818181816	-	UCGGAUAUAAGGCGGUUAUCAAGCGCUUA	54	4	81	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:575298-575843	Cluster_4914	Pocillopora_meandrina_HIv1___Sc0000017	575298	575843	546	726	305	0.290633608815427	.	UAACUCCUUACAUUUAUCGCUAUUAAGCUU	39	3	660	7	5	10	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:591378-591902	Cluster_4915	Pocillopora_meandrina_HIv1___Sc0000017	591378	591902	525	232	96	0.29310344827586204	.	GCAACGGAAAUUGUCUGUUCCUCGUUUGGGU	34	10	194	4	4	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:599532-599946	Cluster_4916	Pocillopora_meandrina_HIv1___Sc0000017	599532	599946	415	77	10	0.987012987012987	+	GAGCAGAAGCUACUUGAC	28	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:771550-771950	Cluster_4917	Pocillopora_meandrina_HIv1___Sc0000017	771550	771950	401	124	88	0.9919354838709677	+	GACAGUUGUUCUGUGUGUGU	6	56	40	11	5	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:773602-774099	Cluster_4918	Pocillopora_meandrina_HIv1___Sc0000017	773602	774099	498	427	289	0.990632318501171	+	GCGGUGUCGUUGCUCAGACA	9	158	141	32	25	25	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:784269-784713	Cluster_4919	Pocillopora_meandrina_HIv1___Sc0000017	784269	784713	445	269	61	0.6022304832713755	.	UAAGAUCUGAUACAUUCUUUGGCGGUG	39	1	256	0	4	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:862340-862763	Cluster_4920	Pocillopora_meandrina_HIv1___Sc0000017	862340	862763	424	82	23	0.024390243902439025	-	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	38	2	76	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1204139-1204541	Cluster_4921	Pocillopora_meandrina_HIv1___Sc0000017	1204139	1204541	403	116	76	0.0	-	GGGCUGGACAGUGUUUCAGAAGAGACUGGAC	5	34	60	6	3	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1303714-1304136	Cluster_4922	Pocillopora_meandrina_HIv1___Sc0000017	1303714	1304136	423	84	36	0.9880952380952381	+	UUCUUCUACCACUUCUUUUUCAAACAAUGU	20	1	83	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1312167-1312769	Cluster_4923	Pocillopora_meandrina_HIv1___Sc0000017	1312167	1312769	603	346	198	0.653179190751445	.	UGAGAUCGUGGAAGGCCAAGUUCCUUGC	29	8	323	4	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1324597-1325023	Cluster_4924	Pocillopora_meandrina_HIv1___Sc0000017	1324597	1325023	427	181	71	0.011049723756906077	-	UUUGAUUGACGUACGGUAUUUGAGACGC	25	4	171	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1379429-1379855	Cluster_4925	Pocillopora_meandrina_HIv1___Sc0000017	1379429	1379855	427	115	34	0.7913043478260869	.	UACGUAACUUUCGGUUUUUCUUUCCGUA	26	5	109	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1550842-1551662	Cluster_4926	Pocillopora_meandrina_HIv1___Sc0000017	1550842	1551662	821	1215	132	0.654320987654321	.	UCUUGUCAAUUCUGUCCAGGGUGAACCA	493	5	1197	1	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1612900-1613329	Cluster_4927	Pocillopora_meandrina_HIv1___Sc0000017	1612900	1613329	430	340	49	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	140	0	338	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1631655-1632082	Cluster_4928	Pocillopora_meandrina_HIv1___Sc0000017	1631655	1632082	428	242	42	0.9545454545454546	+	UAAAGUGUAUAAAAUGGGCUUCUCAGGA	163	1	239	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1636697-1637604	Cluster_4929	Pocillopora_meandrina_HIv1___Sc0000017	1636697	1637604	908	917	357	0.9934569247546347	+	UCUGCAACGGACUUCUAAGGGGUAAAGGC	62	17	885	0	3	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1638965-1639903	Cluster_4930	Pocillopora_meandrina_HIv1___Sc0000017	1638965	1639903	939	613	233	0.9722675367047309	+	UAUCUUGAACUCUGUAAUGAUGGGUGAC	90	28	574	1	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1641559-1642074	Cluster_4931	Pocillopora_meandrina_HIv1___Sc0000017	1641559	1642074	516	7555	375	0.999867637326274	+	UGUGUCGAGCUUCUCUUGUAGCAGGAGU	2908	88	7373	5	53	21	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1661006-1661433	Cluster_4932	Pocillopora_meandrina_HIv1___Sc0000017	1661006	1661433	428	118	13	0.9915254237288136	+	UACCAAGGUCUUGUAGUCUAGUACAACU	65	0	118	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1662584-1663020	Cluster_4933	Pocillopora_meandrina_HIv1___Sc0000017	1662584	1663020	437	495	139	0.020202020202020204	-	UGCGAAAGAAACAGGGAAAGUUUGACGAUG	50	3	427	3	10	31	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1693895-1694324	Cluster_4934	Pocillopora_meandrina_HIv1___Sc0000017	1693895	1694324	430	327	113	0.7400611620795107	.	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	45	1	307	5	0	0	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1789680-1790121	Cluster_4935	Pocillopora_meandrina_HIv1___Sc0000017	1789680	1790121	442	411	66	0.9708029197080292	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	165	4	401	0	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1793808-1794252	Cluster_4936	Pocillopora_meandrina_HIv1___Sc0000017	1793808	1794252	445	691	80	0.1649782923299566	-	GUGUAGAUCAGCCGACUUCAACAUGUUU	397	7	664	2	0	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1900038-1900467	Cluster_4937	Pocillopora_meandrina_HIv1___Sc0000017	1900038	1900467	430	340	53	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	137	1	337	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1926176-1926677	Cluster_4938	Pocillopora_meandrina_HIv1___Sc0000017	1926176	1926677	502	722	133	0.5373961218836565	.	UAAAGUGUAUAAAAUGGGCUUCUCAGGA	137	10	679	4	26	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1933470-1933898	Cluster_4939	Pocillopora_meandrina_HIv1___Sc0000017	1933470	1933898	429	162	38	0.012345679012345678	-	UUCUAAGUGUCGCUGAUGUGGGGACUAUU	41	6	153	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2080328-2080757	Cluster_4940	Pocillopora_meandrina_HIv1___Sc0000017	2080328	2080757	430	336	50	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	134	0	335	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2089210-2089639	Cluster_4941	Pocillopora_meandrina_HIv1___Sc0000017	2089210	2089639	430	328	125	0.9725609756097561	+	UCCAAGGAUCUUAUCGACCUCAUCGUAGUA	99	2	308	1	0	1	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2113863-2114291	Cluster_4942	Pocillopora_meandrina_HIv1___Sc0000017	2113863	2114291	429	148	61	0.0472972972972973	-	UAAGAUAUCGUUAACAACUCGAAGAAGCG	22	0	147	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2186612-2187049	Cluster_4943	Pocillopora_meandrina_HIv1___Sc0000017	2186612	2187049	438	38558	496	7.780486539758286e-05	-	UGGAUGGACUGUGUUCCAGAAGAGACAGG	14639	183	37806	14	533	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2206514-2206944	Cluster_4944	Pocillopora_meandrina_HIv1___Sc0000017	2206514	2206944	431	2311	174	0.9991345737775854	+	AGGAUGGACAGUGUUCCAAAAG	756	21	1366	5	908	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2220758-2221169	Cluster_4945	Pocillopora_meandrina_HIv1___Sc0000017	2220758	2221169	412	75	26	1.0	+	AGGAUGGACAGUGUUCCAAAAGAGACUGG	16	2	62	0	9	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2276537-2276951	Cluster_4946	Pocillopora_meandrina_HIv1___Sc0000017	2276537	2276951	415	767	3	1.0	+	GCGACUGCUGCCGGA	765	767	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2455876-2456293	Cluster_4947	Pocillopora_meandrina_HIv1___Sc0000017	2455876	2456293	418	261	8	1.0	+	UGGCCUGAAAAAAAAAAA	182	260	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2473930-2474359	Cluster_4948	Pocillopora_meandrina_HIv1___Sc0000017	2473930	2474359	430	229	44	0.008733624454148471	-	ACAGUCAGUCUAUUAUGCAACGCACCCAAU	116	3	221	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2489765-2490167	Cluster_4949	Pocillopora_meandrina_HIv1___Sc0000017	2489765	2490167	403	270	111	0.007407407407407408	-	UCUGACCAGUAAUAUUAAGUUUGUAUGAUC	24	7	262	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2494345-2495070	Cluster_4950	Pocillopora_meandrina_HIv1___Sc0000017	2494345	2495070	726	2044	293	0.20939334637964774	.	UAUAUGACGAUUUGUACAAAAUGAUGGAC	447	21	1832	34	36	41	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2498020-2498449	Cluster_4951	Pocillopora_meandrina_HIv1___Sc0000017	2498020	2498449	430	164	61	0.006097560975609756	-	UGUAUAUGGUGGAUUGCCAAUGACGGGCGUU	43	2	159	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2543963-2544375	Cluster_4952	Pocillopora_meandrina_HIv1___Sc0000017	2543963	2544375	413	128	103	0.0234375	-	CUCUGGGUCGGACGGCC	5	63	41	6	4	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2694841-2695270	Cluster_4953	Pocillopora_meandrina_HIv1___Sc0000017	2694841	2695270	430	155	33	0.0	-	UAAUGUGUGACUUUUUCGCUUUUGUUUUGA	70	0	155	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2737275-2737704	Cluster_4954	Pocillopora_meandrina_HIv1___Sc0000017	2737275	2737704	430	194	36	0.015463917525773196	-	UUCACUCCAGAAUGUUUGGCCUCUUUAGCC	126	2	191	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2780735-2781180	Cluster_4955	Pocillopora_meandrina_HIv1___Sc0000017	2780735	2781180	446	1575	231	0.17777777777777778	-	UCCUUCACUCCAGAAUGUUUGGCCUCUU	146	23	1405	5	7	69	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2897925-2898341	Cluster_4956	Pocillopora_meandrina_HIv1___Sc0000017	2897925	2898341	417	543	24	0.0	-	GAGACUUGAAGCGGG	266	530	6	3	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2985643-2986056	Cluster_4957	Pocillopora_meandrina_HIv1___Sc0000017	2985643	2986056	414	100	64	0.99	+	AUCGAUCCAGCAAAGUGUAGGCA	8	32	26	4	11	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2989912-2990431	Cluster_4958	Pocillopora_meandrina_HIv1___Sc0000017	2989912	2990431	520	606	385	0.9983498349834984	+	CCAGGCUGGCUGAGU	16	364	114	40	34	28	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2993141-2993883	Cluster_4959	Pocillopora_meandrina_HIv1___Sc0000017	2993141	2993883	743	494	351	1.0	+	AACUACCAAGUUCUGAGCGAAAAUGAU	7	235	117	45	35	29	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2995620-2996138	Cluster_4960	Pocillopora_meandrina_HIv1___Sc0000017	2995620	2996138	519	551	350	0.9981851179673321	+	ACGAAUCGUUGUGGCACAGAUGCUCCA	22	246	181	34	29	26	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2998480-2998881	Cluster_4961	Pocillopora_meandrina_HIv1___Sc0000017	2998480	2998881	402	130	79	0.9923076923076923	+	CUCGUCGAUCCUGAAUG	11	83	25	6	8	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3011903-3012317	Cluster_4962	Pocillopora_meandrina_HIv1___Sc0000017	3011903	3012317	415	94	21	1.0	+	GUGGUCCGGACGGUG	46	94	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3046579-3046986	Cluster_4963	Pocillopora_meandrina_HIv1___Sc0000017	3046579	3046986	408	109	88	0.009174311926605505	-	GUACUAGACUGUAAGCCA	4	41	40	3	7	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3160389-3160827	Cluster_4964	Pocillopora_meandrina_HIv1___Sc0000017	3160389	3160827	439	293	148	0.7508532423208191	.	UCUAACGGAUACAGCUGCUGUACUGCU	22	19	250	1	6	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3160829-3161248	Cluster_4965	Pocillopora_meandrina_HIv1___Sc0000017	3160829	3161248	420	123	73	0.3008130081300813	.	GGUUAUACUAGACGUAGAGGUUGCAGUC	13	6	81	3	4	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3161421-3161847	Cluster_4966	Pocillopora_meandrina_HIv1___Sc0000017	3161421	3161847	427	209	90	0.7464114832535885	.	UCACGAAUCUUUGCCAUUGUGAGGCUC	24	5	190	1	2	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3163210-3164061	Cluster_4967	Pocillopora_meandrina_HIv1___Sc0000017	3163210	3164061	852	1267	241	0.0947119179163378	-	CGUGUACGACGCCUCUGCCCGAGCUUCAG	349	9	1222	10	2	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3164686-3165314	Cluster_4968	Pocillopora_meandrina_HIv1___Sc0000017	3164686	3165314	629	523	220	0.6539196940726577	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	61	10	496	0	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3210425-3210843	Cluster_4969	Pocillopora_meandrina_HIv1___Sc0000017	3210425	3210843	419	154	26	1.0	+	GUGUGUGUCUUUUUUCUCU	63	149	1	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3224718-3225133	Cluster_4970	Pocillopora_meandrina_HIv1___Sc0000017	3224718	3225133	416	84	7	0.0	-	CCCUUUCCGAGGUCGU	57	82	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3343078-3344847	Cluster_4971	Pocillopora_meandrina_HIv1___Sc0000017	3343078	3344847	1770	2802	1124	0.9532476802284083	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	92	30	2640	6	35	47	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3563626-3564054	Cluster_4972	Pocillopora_meandrina_HIv1___Sc0000017	3563626	3564054	429	350	94	0.0	-	AAGGAAAUUAAUGAUUGUAUAUGUGAGG	49	2	330	1	0	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3564620-3565836	Cluster_4973	Pocillopora_meandrina_HIv1___Sc0000017	3564620	3565836	1217	2117	342	0.002834199338686821	-	UGACAAUCAAACCAUGGACAAACUAAUUUGU	188	35	1928	5	65	21	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3581223-3581652	Cluster_4974	Pocillopora_meandrina_HIv1___Sc0000017	3581223	3581652	430	1842	97	0.0005428881650380022	-	AGUAGAUGCAGUUAGGAAUAAAAUUUUGGA	867	8	1812	4	12	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3581866-3582294	Cluster_4975	Pocillopora_meandrina_HIv1___Sc0000017	3581866	3582294	429	213	46	0.07981220657276995	-	AAGAGAAUCAAGAGCCUGUGCUCCGCGGC	87	6	197	1	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3700715-3701141	Cluster_4976	Pocillopora_meandrina_HIv1___Sc0000017	3700715	3701141	427	98	28	0.07142857142857142	-	UUUUCAGUAAUUAUGCCAAGCACUCAUCGUC	34	0	95	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3761173-3761589	Cluster_4977	Pocillopora_meandrina_HIv1___Sc0000017	3761173	3761589	417	593	12	0.003372681281618887	-	GACUCGGCCGUGGAU	325	591	0	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3929273-3929689	Cluster_4978	Pocillopora_meandrina_HIv1___Sc0000017	3929273	3929689	417	158	31	0.012658227848101266	-	CAGCGAUGAUGAAGACA	32	151	5	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3979364-3979924	Cluster_4979	Pocillopora_meandrina_HIv1___Sc0000017	3979364	3979924	561	627	332	0.4529505582137161	.	UUUAUCUGGAUGUACAUUGG	27	365	16	174	45	19	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3981302-3981865	Cluster_4980	Pocillopora_meandrina_HIv1___Sc0000017	3981302	3981865	564	734	341	0.39645776566757496	.	UCUUCCACUCGGCCAUCGU	34	425	8	218	60	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4136569-4136996	Cluster_4981	Pocillopora_meandrina_HIv1___Sc0000017	4136569	4136996	428	91	20	0.04395604395604396	-	AACUACUGCUCGUGCUCUAGAUAUGACA	36	3	86	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4143141-4143569	Cluster_4982	Pocillopora_meandrina_HIv1___Sc0000017	4143141	4143569	429	292	43	0.9794520547945206	+	AUUGUCUUUAUGGAUCUACUAGGCCAAA	110	2	290	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4180542-4181079	Cluster_4983	Pocillopora_meandrina_HIv1___Sc0000017	4180542	4181079	538	373	187	0.04825737265415549	-	UGCAGUAUUCCAAGGAACUUCUUUGA	38	18	340	4	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4181357-4181905	Cluster_4984	Pocillopora_meandrina_HIv1___Sc0000017	4181357	4181905	549	575	255	0.23130434782608697	.	UUAUUCCUCGCGAUUUUGAAGCAGUUCA	28	32	475	4	9	31	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4182045-4182481	Cluster_4985	Pocillopora_meandrina_HIv1___Sc0000017	4182045	4182481	437	427	195	0.1920374707259953	-	UAUGACGUUCCAGAAUCUUUGACAAAA	36	1	406	2	4	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4183015-4183444	Cluster_4986	Pocillopora_meandrina_HIv1___Sc0000017	4183015	4183444	430	156	58	0.02564102564102564	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	27	0	154	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4204601-4205017	Cluster_4987	Pocillopora_meandrina_HIv1___Sc0000017	4204601	4205017	417	245	11	1.0	+	CUUGUGAAUAGGCGGUG	206	245	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4261931-4262359	Cluster_4988	Pocillopora_meandrina_HIv1___Sc0000017	4261931	4262359	429	169	34	0.9940828402366864	+	GGUGCCUUUGAUGUCUACUGUGACCAGACA	53	6	162	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4272965-4274234	Cluster_4989	Pocillopora_meandrina_HIv1___Sc0000017	4272965	4274234	1270	3058	900	0.8852190974493133	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	335	29	2852	17	17	30	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4274424-4277163	Cluster_4990	Pocillopora_meandrina_HIv1___Sc0000017	4274424	4277163	2740	6272	2152	0.7858737244897959	.	UGAACUCGUGCAACAUCUUGAAGGACA	307	80	5572	68	50	202	300	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4299963-4300364	Cluster_4991	Pocillopora_meandrina_HIv1___Sc0000017	4299963	4300364	402	87	15	0.21839080459770116	.	GUGUUUUUCGGUCUGU	66	69	9	2	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4311274-4311701	Cluster_4992	Pocillopora_meandrina_HIv1___Sc0000017	4311274	4311701	428	207	96	0.9130434782608695	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	80	0	194	2	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4313734-4314141	Cluster_4993	Pocillopora_meandrina_HIv1___Sc0000017	4313734	4314141	408	353	207	0.7875354107648725	.	UGUUCUUUCUCUGCUGUAAUAUAUGGC	26	3	294	3	6	13	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4314952-4315376	Cluster_4994	Pocillopora_meandrina_HIv1___Sc0000017	4314952	4315376	425	260	119	0.7615384615384615	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	24	4	234	5	5	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4365732-4366159	Cluster_4995	Pocillopora_meandrina_HIv1___Sc0000017	4365732	4366159	428	195	64	1.0	+	GGGGUGGGCAGUUUUUCAAAAGAGAAUGGA	32	24	127	14	11	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4379414-4379829	Cluster_4996	Pocillopora_meandrina_HIv1___Sc0000017	4379414	4379829	416	1854	21	1.0	+	UCGGUGGGACCUCCA	911	1854	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4401446-4402222	Cluster_4997	Pocillopora_meandrina_HIv1___Sc0000017	4401446	4402222	777	586	146	0.41467576791808874	.	CCUUUCUACAUCUCUGGCUGCAG	80	21	288	50	4	86	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4404038-4404654	Cluster_4998	Pocillopora_meandrina_HIv1___Sc0000017	4404038	4404654	617	963	289	0.9335410176531672	+	UUCGAGCUAUCACUGAAAGAGGGAGUGGU	99	21	919	3	1	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4459675-4460103	Cluster_4999	Pocillopora_meandrina_HIv1___Sc0000017	4459675	4460103	429	110	38	0.00909090909090909	-	UGACUCAUCUUUUCUUAUUAUUUCUGGCU	22	1	90	4	2	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4482228-4482640	Cluster_5000	Pocillopora_meandrina_HIv1___Sc0000017	4482228	4482640	413	123	56	0.6341463414634146	.	UUCGCUGUUAGCUUUGUUCUCUGU	14	10	75	3	2	6	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4517328-4517754	Cluster_5001	Pocillopora_meandrina_HIv1___Sc0000017	4517328	4517754	427	200	62	0.0	-	UGGACGGUGUUUCAGAGGAGACUGGAUG	30	3	158	1	3	7	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4573969-4574396	Cluster_5002	Pocillopora_meandrina_HIv1___Sc0000017	4573969	4574396	428	154	53	0.025974025974025976	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	22	1	144	0	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4618885-4619312	Cluster_5003	Pocillopora_meandrina_HIv1___Sc0000017	4618885	4619312	428	122	43	0.00819672131147541	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	23	0	118	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4623169-4623669	Cluster_5004	Pocillopora_meandrina_HIv1___Sc0000017	4623169	4623669	501	493	132	0.6186612576064908	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	162	35	408	19	15	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4693316-4693727	Cluster_5005	Pocillopora_meandrina_HIv1___Sc0000017	4693316	4693727	412	194	95	0.6958762886597938	.	UCGAUUCCACCGAAAGAAAUAACCUGUA	27	23	124	9	11	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4707666-4708094	Cluster_5006	Pocillopora_meandrina_HIv1___Sc0000017	4707666	4708094	429	198	77	1.0	+	GUGUUUCAAAAAAGACAGGAUGGCUCGGU	31	7	186	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4742250-4742677	Cluster_5007	Pocillopora_meandrina_HIv1___Sc0000017	4742250	4742677	428	183	65	0.9781420765027322	+	GGGGUGGACGGUGUUCCAAAAGAGACUG	31	7	159	3	7	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4763452-4763880	Cluster_5008	Pocillopora_meandrina_HIv1___Sc0000017	4763452	4763880	429	209	70	0.9712918660287081	+	GGGGUGGACGGUGUUCCAAAAGAGACUG	35	8	187	1	8	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4787179-4787608	Cluster_5009	Pocillopora_meandrina_HIv1___Sc0000017	4787179	4787608	430	90	8	1.0	+	CACAAGACAAGACUCAGUAUUCGCAAGUUG	75	5	84	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4790270-4790684	Cluster_5010	Pocillopora_meandrina_HIv1___Sc0000017	4790270	4790684	415	107	25	0.009345794392523364	-	GAGACUUGAAGCGGG	20	104	0	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4866060-4866489	Cluster_5011	Pocillopora_meandrina_HIv1___Sc0000017	4866060	4866489	430	379	27	0.005277044854881266	-	AAGAUGUCGAGCGUUAGUUUCCAAACGGG	156	12	363	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4883414-4883842	Cluster_5012	Pocillopora_meandrina_HIv1___Sc0000017	4883414	4883842	429	418	131	0.0023923444976076554	-	GCGUCGGUGGUAUAGUGGUGAGCAUAGCU	74	68	305	9	22	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4969812-4970227	Cluster_5013	Pocillopora_meandrina_HIv1___Sc0000017	4969812	4970227	416	84	19	0.011904761904761904	-	CGGCCUGAAAAAAAAAGAAAAAAAAAAAA	9	51	32	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4972306-4972719	Cluster_5014	Pocillopora_meandrina_HIv1___Sc0000017	4972306	4972719	414	87	20	0.0	-	UUGUAGGCGUGGGUU	28	87	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5041786-5042306	Cluster_5015	Pocillopora_meandrina_HIv1___Sc0000017	5041786	5042306	521	2728	421	0.0	-	UUGCACUGUGAAAAUCUGACA	1157	339	688	1369	58	117	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5050908-5051000	Cluster_5016	Pocillopora_meandrina_HIv1___Sc0000017	5050908	5051000	93	129153	682	0.0	-	AACUGCUGAGAUUCUAUGGAUUU	45976	5739	267	1089	21682	97170	3206	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000017:5144143-5144575	Cluster_5017	Pocillopora_meandrina_HIv1___Sc0000017	5144143	5144575	433	2219	156	0.9995493465525012	+	UGGCUGGACAGUAUUUCAGAAGAGACUUG	836	17	2193	1	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5299193-5299608	Cluster_5018	Pocillopora_meandrina_HIv1___Sc0000017	5299193	5299608	416	252	18	0.9801587301587301	+	GGUGUGCUCUUAACUA	177	249	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5582994-5583418	Cluster_5019	Pocillopora_meandrina_HIv1___Sc0000017	5582994	5583418	425	82	26	0.036585365853658534	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	42	2	79	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5607872-5608285	Cluster_5020	Pocillopora_meandrina_HIv1___Sc0000017	5607872	5608285	414	117	52	0.008547008547008548	-	GGCGGACGUGUCGGGC	44	86	18	5	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5636506-5636906	Cluster_5021	Pocillopora_meandrina_HIv1___Sc0000017	5636506	5636906	401	392	236	0.7933673469387755	.	GUGAUACCUAUGAACCUGGAGGCU	10	8	318	2	6	29	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5637069-5637745	Cluster_5022	Pocillopora_meandrina_HIv1___Sc0000017	5637069	5637745	677	8010	540	0.9960049937578027	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2235	9	7884	2	43	34	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5647951-5648365	Cluster_5023	Pocillopora_meandrina_HIv1___Sc0000017	5647951	5648365	415	79	12	0.11392405063291139	-	CGGGCUUUCAAAGAUA	52	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5785384-5785798	Cluster_5024	Pocillopora_meandrina_HIv1___Sc0000017	5785384	5785798	415	91	7	0.0	-	GAAGUCGGCAAAAUG	44	91	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5824989-5825524	Cluster_5025	Pocillopora_meandrina_HIv1___Sc0000017	5824989	5825524	536	1997	437	0.0	-	UUGGUCUUCUGGCUUCAACAUUA	461	246	648	134	188	597	184	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5874600-5875018	Cluster_5026	Pocillopora_meandrina_HIv1___Sc0000017	5874600	5875018	419	86	33	0.313953488372093	.	CCAAUACCGAAACAACAUAGAUGAACUAAC	15	0	81	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5875339-5875766	Cluster_5027	Pocillopora_meandrina_HIv1___Sc0000017	5875339	5875766	428	396	86	0.9242424242424242	+	UGUUGUGCUUUUUGUUUGUCUUUGAAAA	151	2	377	2	0	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5875966-5876475	Cluster_5028	Pocillopora_meandrina_HIv1___Sc0000017	5875966	5876475	510	423	89	0.9621749408983451	+	AACUACUGCUCGUACUCUAGAUAUGACA	70	14	396	5	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5988289-5988704	Cluster_5029	Pocillopora_meandrina_HIv1___Sc0000017	5988289	5988704	416	236	22	0.9872881355932204	+	UUGGUGGAGAUGGAU	72	234	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6108318-6108792	Cluster_5030	Pocillopora_meandrina_HIv1___Sc0000017	6108318	6108792	475	3085	222	0.9951377633711507	+	UCUCGGUGGGACCUCCG	730	2932	16	25	49	52	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6109021-6109449	Cluster_5031	Pocillopora_meandrina_HIv1___Sc0000017	6109021	6109449	429	222	102	0.009009009009009009	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	39	63	95	8	7	20	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6109524-6110002	Cluster_5032	Pocillopora_meandrina_HIv1___Sc0000017	6109524	6110002	479	903	372	0.026578073089700997	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	66	390	348	68	45	30	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6458993-6459407	Cluster_5033	Pocillopora_meandrina_HIv1___Sc0000017	6458993	6459407	415	145	32	0.15172413793103448	-	CCUUUCCGAGGUCGU	101	130	11	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6694333-6694803	Cluster_5034	Pocillopora_meandrina_HIv1___Sc0000017	6694333	6694803	471	2225	285	0.001348314606741573	-	GAUAUAAUUCUGCAAUGAUGAGGACA	385	449	1304	122	127	84	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6794015-6794430	Cluster_5035	Pocillopora_meandrina_HIv1___Sc0000017	6794015	6794430	416	113	17	0.008849557522123894	-	ACUGACGCAGUGCUCA	34	112	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7031276-7033410	Cluster_5036	Pocillopora_meandrina_HIv1___Sc0000017	7031276	7033410	2135	5932	1269	0.03607552258934592	-	UGUAAUACAAAGUCAUGUGCCACCUCUGC	285	64	5692	13	14	55	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7034028-7034455	Cluster_5037	Pocillopora_meandrina_HIv1___Sc0000017	7034028	7034455	428	320	77	0.1125	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	143	1	286	0	4	1	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7034719-7035146	Cluster_5038	Pocillopora_meandrina_HIv1___Sc0000017	7034719	7035146	428	126	49	0.031746031746031744	-	UACAAGACGUACUGGAGAGCAUUGAACAAAU	22	3	120	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7036864-7037297	Cluster_5039	Pocillopora_meandrina_HIv1___Sc0000017	7036864	7037297	434	292	112	0.3972602739726027	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	64	1	260	1	4	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7101999-7102417	Cluster_5040	Pocillopora_meandrina_HIv1___Sc0000017	7101999	7102417	419	192	25	0.9635416666666666	+	CCUUUGUUCUAAGAUUUGC	48	176	6	8	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7103692-7104222	Cluster_5041	Pocillopora_meandrina_HIv1___Sc0000017	7103692	7104222	531	1059	374	0.0018885741265344666	-	CAUCUCCACUCUAGCCCAUCUGU	70	291	275	179	71	160	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7115531-7115956	Cluster_5042	Pocillopora_meandrina_HIv1___Sc0000017	7115531	7115956	426	339	240	0.0029498525073746312	-	CAGACUGGGAGCUACUUGCUUUA	6	118	123	22	21	31	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7116270-7116676	Cluster_5043	Pocillopora_meandrina_HIv1___Sc0000017	7116270	7116676	407	114	86	0.0	-	GUGCUCUGCCUUUAAAAA	4	64	17	17	4	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7213310-7213741	Cluster_5044	Pocillopora_meandrina_HIv1___Sc0000017	7213310	7213741	432	1819	176	0.002748763056624519	-	UGAAAGGACAUUUACAUUUGAGGAUGG	278	38	1693	51	9	17	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7235301-7235729	Cluster_5045	Pocillopora_meandrina_HIv1___Sc0000017	7235301	7235729	429	323	80	0.5851393188854489	.	UCAAAUAAGGUUGCAUGAGCCUCAUGACC	130	5	292	4	0	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7254938-7255365	Cluster_5046	Pocillopora_meandrina_HIv1___Sc0000017	7254938	7255365	428	189	50	0.042328042328042326	-	GUGUGACUCAAGUAAUGGUUAUUGUUGU	54	4	177	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7255604-7257692	Cluster_5047	Pocillopora_meandrina_HIv1___Sc0000017	7255604	7257692	2089	5932	1402	0.9391436277815239	+	UUAAAUGAAGUUUCCAAUGUUUGACUGUC	829	46	5560	25	35	135	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7257721-7258847	Cluster_5048	Pocillopora_meandrina_HIv1___Sc0000017	7257721	7258847	1127	1912	611	0.9534518828451883	+	UGUGACAACUACUUGUGCCCGCCAAGGGGA	117	45	1796	13	10	19	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7299626-7300051	Cluster_5049	Pocillopora_meandrina_HIv1___Sc0000017	7299626	7300051	426	158	70	0.006329113924050633	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	15	3	148	1	1	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7302129-7302556	Cluster_5050	Pocillopora_meandrina_HIv1___Sc0000017	7302129	7302556	428	186	41	0.016129032258064516	-	UCGUAGAACAUCGCAUUACGAGGACCGA	88	3	182	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7303252-7303777	Cluster_5051	Pocillopora_meandrina_HIv1___Sc0000017	7303252	7303777	526	6614	307	0.9715754460235864	+	UCUGUUUCCAUAUUUGAACGCUGACGAC	3127	41	6381	22	10	15	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7321863-7322291	Cluster_5052	Pocillopora_meandrina_HIv1___Sc0000017	7321863	7322291	429	422	70	0.990521327014218	+	UGAAAGGACAUUUACAUUUGAGGAUGGAG	86	6	396	10	4	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7343995-7344418	Cluster_5053	Pocillopora_meandrina_HIv1___Sc0000017	7343995	7344418	424	106	29	1.0	+	UCUGUUUCCAUGUUUGAACGCUGACGAC	34	0	102	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7346096-7346508	Cluster_5054	Pocillopora_meandrina_HIv1___Sc0000017	7346096	7346508	413	124	68	0.008064516129032258	-	UGCUCAUAUCUAAUAGAACUACUGCCGUU	16	1	122	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7348006-7348429	Cluster_5055	Pocillopora_meandrina_HIv1___Sc0000017	7348006	7348429	424	118	31	0.0	-	UCUGUUUCCAUGUUUGAACGCUGACGAC	42	1	117	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7409563-7410036	Cluster_5056	Pocillopora_meandrina_HIv1___Sc0000017	7409563	7410036	474	324	125	0.9969135802469136	+	CCGACAUGCCUGACUAUUUCAAACAAGC	47	24	274	14	1	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7410725-7411234	Cluster_5057	Pocillopora_meandrina_HIv1___Sc0000017	7410725	7411234	510	555	133	0.9837837837837838	+	CUGUGGCUCAUGUUAACCCUUUGUAACUG	68	5	539	5	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7416579-7417006	Cluster_5058	Pocillopora_meandrina_HIv1___Sc0000017	7416579	7417006	428	1649	56	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAA	1390	0	1592	0	0	0	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7448131-7448836	Cluster_5059	Pocillopora_meandrina_HIv1___Sc0000017	7448131	7448836	706	382	148	0.20157068062827224	.	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	61	0	345	0	5	10	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7508338-7508747	Cluster_5060	Pocillopora_meandrina_HIv1___Sc0000017	7508338	7508747	410	158	65	0.9936708860759493	+	CCGACAUGCAUGACUAUUUCAAACAAGC	21	3	144	3	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7557760-7558187	Cluster_5061	Pocillopora_meandrina_HIv1___Sc0000017	7557760	7558187	428	269	44	1.0	+	UCGUAGAACAUCGCAUUACGAGGACCGA	140	0	264	0	0	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7590476-7590904	Cluster_5062	Pocillopora_meandrina_HIv1___Sc0000017	7590476	7590904	429	99	28	0.0	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	36	0	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7605253-7605798	Cluster_5063	Pocillopora_meandrina_HIv1___Sc0000017	7605253	7605798	546	281	100	0.9715302491103203	+	UGUACUGAUCUUUGUCUUCUGCAGCCAGA	40	1	275	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7607254-7607681	Cluster_5064	Pocillopora_meandrina_HIv1___Sc0000017	7607254	7607681	428	207	43	0.9806763285024155	+	UGGUAAACUUCCCUAACAUUGGCCUGUG	44	0	206	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7607940-7608367	Cluster_5065	Pocillopora_meandrina_HIv1___Sc0000017	7607940	7608367	428	104	14	0.9903846153846154	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	44	1	103	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7611048-7611495	Cluster_5066	Pocillopora_meandrina_HIv1___Sc0000017	7611048	7611495	448	447	107	0.48769574944071586	.	AUAGCUCGAACGAGGACUCGUCCUUAACA	81	9	387	1	5	7	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7629197-7629668	Cluster_5067	Pocillopora_meandrina_HIv1___Sc0000017	7629197	7629668	472	341	113	0.36363636363636365	.	UCUGUUUCCAUAUUUGAACACUGUCGAC	107	12	302	6	7	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7631065-7632147	Cluster_5068	Pocillopora_meandrina_HIv1___Sc0000017	7631065	7632147	1083	7268	250	0.000275178866263071	-	UUUCCAUAUUUGAACGCUGACGACAGUAGG	4813	3	7261	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7632391-7632822	Cluster_5069	Pocillopora_meandrina_HIv1___Sc0000017	7632391	7632822	432	348	80	0.0	-	UGUUGAUUCUUUUCCAUUUAAUACAAU	44	2	340	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7635624-7636052	Cluster_5070	Pocillopora_meandrina_HIv1___Sc0000017	7635624	7636052	429	113	31	0.008849557522123894	-	UCGGAUCUGAAAAAAACUGCGUUUGUUUUC	25	1	111	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7636103-7636532	Cluster_5071	Pocillopora_meandrina_HIv1___Sc0000017	7636103	7636532	430	158	71	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	35	0	156	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7636880-7637309	Cluster_5072	Pocillopora_meandrina_HIv1___Sc0000017	7636880	7637309	430	152	65	0.0	-	UGUACGCGUAUCUCUUGUUUAUCGAGCUUU	50	2	149	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7639204-7639914	Cluster_5073	Pocillopora_meandrina_HIv1___Sc0000017	7639204	7639914	711	422	129	0.002369668246445498	-	UGUCAAAUCUUCAAUUGGUCUCUGUGCCGGA	78	2	401	13	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7640797-7641262	Cluster_5074	Pocillopora_meandrina_HIv1___Sc0000017	7640797	7641262	466	488	179	0.0	-	UGGGCAUCCAUCUAUAAAAGUGGGAAAGUU	60	2	473	6	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7707358-7707848	Cluster_5075	Pocillopora_meandrina_HIv1___Sc0000017	7707358	7707848	491	341	108	0.9970674486803519	+	UGACCCAAUAAGUGGACUUCCGUAUUCC	41	4	305	0	1	24	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7726747-7727160	Cluster_5076	Pocillopora_meandrina_HIv1___Sc0000017	7726747	7727160	414	157	60	0.0	-	CCGACAUGCAUGACUAUUUCAAACAAGC	21	11	138	3	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7809959-7810417	Cluster_5077	Pocillopora_meandrina_HIv1___Sc0000017	7809959	7810417	459	277	98	0.9927797833935018	+	CCGACAUGCCUGACUAUUUCAAACAAGC	46	9	250	8	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7811089-7811591	Cluster_5078	Pocillopora_meandrina_HIv1___Sc0000017	7811089	7811591	503	1759	239	0.9613416714042069	+	UCGUAGAACAUCGCAUUACGAGGACCGA	821	8	1708	5	8	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7824092-7824816	Cluster_5079	Pocillopora_meandrina_HIv1___Sc0000017	7824092	7824816	725	6331	295	0.0	-	UUUCCAUAUUUGAACGCUGACGACAGUACGU	1610	2	6280	1	4	2	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7827790-7828212	Cluster_5080	Pocillopora_meandrina_HIv1___Sc0000017	7827790	7828212	423	82	28	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	26	0	81	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7839161-7839569	Cluster_5081	Pocillopora_meandrina_HIv1___Sc0000017	7839161	7839569	409	96	51	0.8333333333333334	+	UGAAAGGACAUUUACAUUUGAGGAUGG	8	1	86	2	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7872588-7874183	Cluster_5082	Pocillopora_meandrina_HIv1___Sc0000017	7872588	7874183	1596	10232	853	0.0018569194683346365	-	UUUCCAUAUUUGAACGCUGACGACAGUAGG	4968	64	10067	12	10	65	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7876569-7876996	Cluster_5083	Pocillopora_meandrina_HIv1___Sc0000017	7876569	7876996	428	215	99	0.0	-	UAGUGUAUACCUGAAGAUCUAUUUUUAGC	16	4	207	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7877574-7878000	Cluster_5084	Pocillopora_meandrina_HIv1___Sc0000017	7877574	7878000	427	144	59	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	26	0	144	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7880962-7881390	Cluster_5085	Pocillopora_meandrina_HIv1___Sc0000017	7880962	7881390	429	165	49	0.006060606060606061	-	UAAAUCUUGCAUUGGAACCACUUGGCGCG	32	2	162	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7885546-7885972	Cluster_5086	Pocillopora_meandrina_HIv1___Sc0000017	7885546	7885972	427	243	133	0.00411522633744856	-	UGCUAAAUGUGUCUUCGUCGGUAUUACGU	15	2	237	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7910611-7911034	Cluster_5087	Pocillopora_meandrina_HIv1___Sc0000017	7910611	7911034	424	202	99	0.49504950495049505	.	CUGUGGCUCAUGUUAACCCUUUGUAACC	34	7	189	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7957991-7958415	Cluster_5088	Pocillopora_meandrina_HIv1___Sc0000017	7957991	7958415	425	184	72	0.9945652173913043	+	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	18	4	166	3	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7971860-7972287	Cluster_5089	Pocillopora_meandrina_HIv1___Sc0000017	7971860	7972287	428	157	33	0.01910828025477707	-	UACGACGUGGUUCGGAGGCAGUGUGACCA	28	0	152	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7980367-7980781	Cluster_5090	Pocillopora_meandrina_HIv1___Sc0000017	7980367	7980781	415	88	5	1.0	+	CUUUCCGAGGUCGCA	73	88	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7997759-7998189	Cluster_5091	Pocillopora_meandrina_HIv1___Sc0000017	7997759	7998189	431	407	61	1.0	+	UCUGUUUCUAUAUUUGAACGCUGACGAC	93	0	401	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8006653-8007086	Cluster_5092	Pocillopora_meandrina_HIv1___Sc0000017	8006653	8007086	434	831	79	0.9975932611311673	+	UUUCCAUAUUUGAACGCUGACGACAGUACA	224	3	816	1	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8014781-8015205	Cluster_5093	Pocillopora_meandrina_HIv1___Sc0000017	8014781	8015205	425	184	79	0.005434782608695652	-	CCGACAUGCAUGACUAUUUCAAACAAGC	20	6	162	8	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8043563-8043996	Cluster_5094	Pocillopora_meandrina_HIv1___Sc0000017	8043563	8043996	434	726	67	0.012396694214876033	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	251	9	693	0	0	1	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8073302-8076351	Cluster_5095	Pocillopora_meandrina_HIv1___Sc0000017	8073302	8076351	3050	73543	4569	0.04423262581075017	-	UGAUCAUGGAUUCUAAACUGGUAAUGGCC	23079	727	69740	270	232	986	1588	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8086133-8086560	Cluster_5096	Pocillopora_meandrina_HIv1___Sc0000017	8086133	8086560	428	163	23	1.0	+	UCUGUUUCCAUAUUUGGACGCUGACGAC	85	0	157	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8099388-8100423	Cluster_5097	Pocillopora_meandrina_HIv1___Sc0000017	8099388	8100423	1036	2058	600	0.20602526724975703	.	UCGAUCAAUUGGCCUAUAUGAUUCUU	147	41	1639	25	10	134	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8106106-8106536	Cluster_5098	Pocillopora_meandrina_HIv1___Sc0000017	8106106	8106536	431	198	84	1.0	+	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	35	0	195	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8115360-8116284	Cluster_5099	Pocillopora_meandrina_HIv1___Sc0000017	8115360	8116284	925	12219	505	0.999754480726737	+	UUUCCAUAUUUGAACGCUGACGACAGUAC	2382	10	12051	3	4	11	140	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8161609-8162037	Cluster_5100	Pocillopora_meandrina_HIv1___Sc0000017	8161609	8162037	429	219	80	0.9680365296803652	+	UGACCCAAUAAGUGGACUUCCGUAUUCC	23	7	191	2	0	18	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8171935-8172376	Cluster_5101	Pocillopora_meandrina_HIv1___Sc0000017	8171935	8172376	442	54741	609	0.9999086607844212	+	UUUCCAUAUUUGAACGCUGACGACAGUACA	14864	13	53889	8	12	29	790	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8180902-8181326	Cluster_5102	Pocillopora_meandrina_HIv1___Sc0000017	8180902	8181326	425	177	63	0.0	-	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	17	3	164	1	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8209815-8210249	Cluster_5103	Pocillopora_meandrina_HIv1___Sc0000017	8209815	8210249	435	10670	315	0.004217432052483599	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	4214	17	10345	4	15	16	273	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8261341-8261768	Cluster_5104	Pocillopora_meandrina_HIv1___Sc0000017	8261341	8261768	428	136	23	0.014705882352941176	-	UCUGUUUCCAUAUUUGAACACUGUCGAC	86	2	125	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8261986-8262485	Cluster_5105	Pocillopora_meandrina_HIv1___Sc0000017	8261986	8262485	500	335	84	0.08955223880597014	-	UGUUGGAGACGGUCAUUUUCUGAAAGGA	68	9	313	0	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8265838-8266260	Cluster_5106	Pocillopora_meandrina_HIv1___Sc0000017	8265838	8266260	423	126	44	0.6031746031746031	.	UUUCCAUACUUGAACGCUGACGACAGUAGG	26	0	118	2	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8280144-8280570	Cluster_5107	Pocillopora_meandrina_HIv1___Sc0000017	8280144	8280570	427	544	128	0.22977941176470587	.	AUUGAUUCUAUUUUGUACGGCCUAGU	193	5	515	2	1	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8284831-8285255	Cluster_5108	Pocillopora_meandrina_HIv1___Sc0000017	8284831	8285255	425	89	39	0.9775280898876404	+	UGAAAGGACAUUUACAUUUGAGGAUGGAG	13	2	84	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8285928-8286355	Cluster_5109	Pocillopora_meandrina_HIv1___Sc0000017	8285928	8286355	428	107	29	0.9813084112149533	+	UCGUAGAACAUCGCAUUACGAGGACCGA	53	1	104	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8345457-8345881	Cluster_5110	Pocillopora_meandrina_HIv1___Sc0000017	8345457	8345881	425	172	70	1.0	+	CCGACAUGCAUGACUAUUUCAAACAAGC	21	5	159	0	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8355853-8356266	Cluster_5111	Pocillopora_meandrina_HIv1___Sc0000017	8355853	8356266	414	267	141	0.9850187265917603	+	UGUAACAGCUCUUGUGUCUUCAGGCCUCGA	22	4	255	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8356873-8357301	Cluster_5112	Pocillopora_meandrina_HIv1___Sc0000017	8356873	8357301	429	1480	151	0.9932432432432432	+	UCUUUCGGUUCUUUGGUGAGGUCGCCAUC	685	49	1425	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8359861-8360291	Cluster_5113	Pocillopora_meandrina_HIv1___Sc0000017	8359861	8360291	431	228	122	0.9254385964912281	+	UCCCGAUCGCGAAUAUCGAACCGUCGAUAUG	29	2	205	0	3	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8361688-8362276	Cluster_5114	Pocillopora_meandrina_HIv1___Sc0000017	8361688	8362276	589	54556	1186	0.00010997873744409414	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	22207	82	54046	15	40	209	164	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8411027-8411454	Cluster_5115	Pocillopora_meandrina_HIv1___Sc0000017	8411027	8411454	428	147	32	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	49	0	147	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8418421-8418858	Cluster_5116	Pocillopora_meandrina_HIv1___Sc0000017	8418421	8418858	438	192	72	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	33	0	189	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8424151-8425401	Cluster_5117	Pocillopora_meandrina_HIv1___Sc0000017	8424151	8425401	1251	5214	725	0.9595320291522823	+	UCGAUCAAUUGGCUUAUAUGAUUCUU	625	31	4954	8	17	60	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8437082-8437511	Cluster_5118	Pocillopora_meandrina_HIv1___Sc0000017	8437082	8437511	430	1316	148	0.044072948328267476	-	UGUGAUUGCAUGGCUGGUCUUGGAGAGAGC	427	43	1088	40	13	62	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8439842-8440269	Cluster_5119	Pocillopora_meandrina_HIv1___Sc0000017	8439842	8440269	428	173	27	0.0	-	UCUGUUUCCAUAUUUGGACGCUGACGAC	109	0	172	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8450021-8450534	Cluster_5120	Pocillopora_meandrina_HIv1___Sc0000017	8450021	8450534	514	10082	597	0.8546915294584407	+	UACGAUCACGUCCGCCAUUAUCACUGAC	2634	35	9123	26	43	311	544	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8458475-8458895	Cluster_5121	Pocillopora_meandrina_HIv1___Sc0000017	8458475	8458895	421	127	43	0.13385826771653545	-	UCUGUUUCCAUAUUUGAACACUGACGAC	28	10	106	6	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8472664-8473122	Cluster_5122	Pocillopora_meandrina_HIv1___Sc0000017	8472664	8473122	459	302	102	1.0	+	CCGACAUGCCUGACUAUUUCAAACAAGC	40	18	265	4	3	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8478790-8479217	Cluster_5123	Pocillopora_meandrina_HIv1___Sc0000017	8478790	8479217	428	1670	57	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAA	1425	2	1630	0	1	1	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8485860-8486289	Cluster_5124	Pocillopora_meandrina_HIv1___Sc0000017	8485860	8486289	430	119	23	0.0	-	UGGACUUCCGUAUUCCUCUAGAAUAAGAUA	86	0	118	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8491348-8491803	Cluster_5125	Pocillopora_meandrina_HIv1___Sc0000017	8491348	8491803	456	572	165	0.0034965034965034965	-	UCUUCAAUUGGUCUCUGUGCCGGACUGA	60	8	467	23	3	8	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8521175-8521606	Cluster_5126	Pocillopora_meandrina_HIv1___Sc0000017	8521175	8521606	432	369	69	1.0	+	UCUGUUUCUAUAUUUGAACGCUGACGAC	85	0	368	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8533693-8534118	Cluster_5127	Pocillopora_meandrina_HIv1___Sc0000017	8533693	8534118	426	171	62	0.0	-	UGAAAGGACAUUUACAUUUGAGGAUGGAG	18	2	159	4	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8579114-8579615	Cluster_5128	Pocillopora_meandrina_HIv1___Sc0000017	8579114	8579615	502	375	134	0.224	.	UGUACUGUUUGUAUUUUUUUUCCUGGG	41	8	319	3	6	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8588735-8589162	Cluster_5129	Pocillopora_meandrina_HIv1___Sc0000017	8588735	8589162	428	112	27	0.9821428571428571	+	UACGACGUGGUUCGGAGGCAGUGUGACC	20	2	108	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8589297-8589725	Cluster_5130	Pocillopora_meandrina_HIv1___Sc0000017	8589297	8589725	429	383	91	0.9268929503916449	+	UGUUGGAGACGGUCAUUUUCUGAAAGGA	136	0	368	4	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8600200-8600945	Cluster_5131	Pocillopora_meandrina_HIv1___Sc0000017	8600200	8600945	746	462	250	0.7857142857142857	.	UGUAAACUUGAGAGUCGUCAGCGUAACA	14	4	417	2	7	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8602145-8602976	Cluster_5132	Pocillopora_meandrina_HIv1___Sc0000017	8602145	8602976	832	614	248	0.05863192182410423	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	55	6	585	0	3	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8614396-8614831	Cluster_5133	Pocillopora_meandrina_HIv1___Sc0000017	8614396	8614831	436	13320	426	0.9984234234234234	+	UCUGUUUCCAUAUUUGAACGCUGACGAU	4116	143	12649	18	123	108	279	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8622621-8623331	Cluster_5134	Pocillopora_meandrina_HIv1___Sc0000017	8622621	8623331	711	849	252	0.9988221436984688	+	UGUCAAAUCUUCAAUUGGUCUCUGUGCCGGA	84	4	826	12	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8623502-8623931	Cluster_5135	Pocillopora_meandrina_HIv1___Sc0000017	8623502	8623931	430	265	117	1.0	+	UGUUUCAAUCUGUUCUAUACCCUCUUGG	18	4	256	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8626004-8626566	Cluster_5136	Pocillopora_meandrina_HIv1___Sc0000017	8626004	8626566	563	356	178	1.0	+	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	37	7	337	2	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8629991-8631496	Cluster_5137	Pocillopora_meandrina_HIv1___Sc0000017	8629991	8631496	1506	14686	1238	0.9867901402696445	+	UUUCCAUAUUUGAACGCUGACGACAGUAGG	3238	256	14244	17	24	120	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8636006-8636685	Cluster_5138	Pocillopora_meandrina_HIv1___Sc0000017	8636006	8636685	680	666	258	0.8603603603603603	+	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	38	12	602	6	4	16	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8642086-8642602	Cluster_5139	Pocillopora_meandrina_HIv1___Sc0000017	8642086	8642602	517	1875	309	0.912	+	UACGACGUGGUUCUGAGGCAGCGUGACC	128	17	1792	2	5	18	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8642734-8643702	Cluster_5140	Pocillopora_meandrina_HIv1___Sc0000017	8642734	8643702	969	1016	330	0.5127952755905512	.	UCUGUUUCCAUAUUUGAACACUGUCGAC	106	14	939	6	17	14	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8654467-8654883	Cluster_5141	Pocillopora_meandrina_HIv1___Sc0000017	8654467	8654883	417	128	16	0.9765625	+	GCCGGGAUAGCUCAGUC	66	124	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8660635-8661065	Cluster_5142	Pocillopora_meandrina_HIv1___Sc0000017	8660635	8661065	431	562	141	0.9661921708185054	+	UUUACAACGUCCGGCUUGACCAUUUACA	61	4	528	1	8	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8715732-8716380	Cluster_5143	Pocillopora_meandrina_HIv1___Sc0000017	8715732	8716380	649	469	223	0.9253731343283582	+	UGAAACGAUUCUCCACUUCGAUCGAGCA	24	10	418	4	3	9	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8855629-8856058	Cluster_5144	Pocillopora_meandrina_HIv1___Sc0000017	8855629	8856058	430	191	25	1.0	+	UUGAUCCAUGUUAUGACUAUCCGACUGACA	44	2	187	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8903791-8904209	Cluster_5145	Pocillopora_meandrina_HIv1___Sc0000017	8903791	8904209	419	88	27	1.0	+	GCCUUGUAGAAUUCUUUGUAGG	13	39	13	7	16	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8971229-8971653	Cluster_5146	Pocillopora_meandrina_HIv1___Sc0000017	8971229	8971653	425	143	47	0.0	-	CACUUCCUGAUUUUAACCACAACUGUGUGGU	40	13	117	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9006632-9007114	Cluster_5147	Pocillopora_meandrina_HIv1___Sc0000017	9006632	9007114	483	423	196	0.9456264775413712	+	UUCAAUGGGAAAACGAGAAUAGCGUGAGU	19	23	273	13	11	39	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9062627-9063057	Cluster_5148	Pocillopora_meandrina_HIv1___Sc0000017	9062627	9063057	431	10961	434	0.9993613721375787	+	GCGUUGGUGGUAUAGUGGUGAGCAUAGCU	3833	282	10453	24	40	107	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9089557-9089973	Cluster_5149	Pocillopora_meandrina_HIv1___Sc0000017	9089557	9089973	417	1011	27	0.002967359050445104	-	CUUUCCGAGGUCACA	764	1011	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9090044-9090720	Cluster_5150	Pocillopora_meandrina_HIv1___Sc0000017	9090044	9090720	677	7899	550	0.004051145714647424	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2096	7	7769	6	40	30	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9090774-9092463	Cluster_5151	Pocillopora_meandrina_HIv1___Sc0000017	9090774	9092463	1690	9186	2457	0.07533202699760505	-	UGAUAGACUGCACGACGAUUUACGUCA	503	131	8275	60	83	288	349	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9151739-9152167	Cluster_5152	Pocillopora_meandrina_HIv1___Sc0000017	9151739	9152167	429	259	60	0.9845559845559846	+	AAGGAGUUAACGACAAGUUGAAGGCGAAG	67	7	226	8	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9244465-9244894	Cluster_5153	Pocillopora_meandrina_HIv1___Sc0000017	9244465	9244894	430	250	96	0.968	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	79	0	242	0	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:79689-80104	Cluster_5154	Pocillopora_meandrina_HIv1___Sc0000018	79689	80104	416	85	14	0.011764705882352941	-	UCCCCGCGUCUCCACCA	25	85	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:125517-125940	Cluster_5155	Pocillopora_meandrina_HIv1___Sc0000018	125517	125940	424	9421	165	0.000849166755121537	-	UCUGACGAAGGGCUGACACUCA	5781	217	15	2737	6244	133	75	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:177215-177764	Cluster_5156	Pocillopora_meandrina_HIv1___Sc0000018	177215	177764	550	311	96	0.01607717041800643	-	UGUGACUGAAAAGAUCCUGAAGGAACUGAAC	80	23	281	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:204993-205696	Cluster_5157	Pocillopora_meandrina_HIv1___Sc0000018	204993	205696	704	286	145	0.9125874125874126	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	36	5	265	1	4	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:206926-207352	Cluster_5158	Pocillopora_meandrina_HIv1___Sc0000018	206926	207352	427	269	156	0.8401486988847584	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	27	2	239	1	2	3	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:218817-219532	Cluster_5159	Pocillopora_meandrina_HIv1___Sc0000018	218817	219532	716	849	355	0.7055359246171967	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	110	14	752	4	4	20	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:246943-247783	Cluster_5160	Pocillopora_meandrina_HIv1___Sc0000018	246943	247783	841	824	130	0.0012135922330097086	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	201	3	753	0	63	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:255356-256079	Cluster_5161	Pocillopora_meandrina_HIv1___Sc0000018	255356	256079	724	1169	299	0.033361847733105215	-	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	66	12	1072	5	5	22	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:267370-267831	Cluster_5162	Pocillopora_meandrina_HIv1___Sc0000018	267370	267831	462	1142	192	0.043782837127845885	-	UAUUCACACGUGUUAUCUCGUCGCUCG	136	4	1092	1	0	4	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:269536-270067	Cluster_5163	Pocillopora_meandrina_HIv1___Sc0000018	269536	270067	532	2126	279	0.47695202257761055	.	UUCUAGCUCGACUUCACGCU	248	999	195	344	486	97	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:290221-290739	Cluster_5164	Pocillopora_meandrina_HIv1___Sc0000018	290221	290739	519	474	129	0.002109704641350211	-	AGAUUACUCAUGCGGCCUUUUGGAUAAGA	83	9	453	5	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:303788-304217	Cluster_5165	Pocillopora_meandrina_HIv1___Sc0000018	303788	304217	430	923	73	0.0	-	GAAAUUCGGAGUGGCUGCUUAUUUCAUAGC	540	5	914	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:317638-318339	Cluster_5166	Pocillopora_meandrina_HIv1___Sc0000018	317638	318339	702	270	141	0.9444444444444444	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	27	3	251	4	4	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:319569-319997	Cluster_5167	Pocillopora_meandrina_HIv1___Sc0000018	319569	319997	429	219	119	0.8036529680365296	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	0	196	3	0	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:325038-325440	Cluster_5168	Pocillopora_meandrina_HIv1___Sc0000018	325038	325440	403	221	146	0.07692307692307693	-	GAGAUGGAUGGAGACG	6	86	91	12	12	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:342075-342489	Cluster_5169	Pocillopora_meandrina_HIv1___Sc0000018	342075	342489	415	234	69	0.017094017094017096	-	UGGGUUCUGUUGGAA	151	189	20	4	6	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:396275-396705	Cluster_5170	Pocillopora_meandrina_HIv1___Sc0000018	396275	396705	431	4221	161	0.0011845534233593934	-	UGAUGAACUAGAGAACCAGUGCU	1130	19	855	5	35	2991	316	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:454439-454856	Cluster_5171	Pocillopora_meandrina_HIv1___Sc0000018	454439	454856	418	132	66	0.8636363636363636	+	ACUACCGUGAGACUGAAGAACACAACUAUA	11	15	85	7	0	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:456710-457148	Cluster_5172	Pocillopora_meandrina_HIv1___Sc0000018	456710	457148	439	403	37	0.7990074441687345	.	AUCAGCAAGAAAAGCAGGUGCC	105	7	262	1	107	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:467842-468271	Cluster_5173	Pocillopora_meandrina_HIv1___Sc0000018	467842	468271	430	212	39	0.9952830188679245	+	GUGAGUCUGAUACAUCUUGCCGCACAUGGA	114	2	162	0	2	9	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:776830-777245	Cluster_5174	Pocillopora_meandrina_HIv1___Sc0000018	776830	777245	416	124	10	0.008064516129032258	-	AACAAGAAUAGAGGCA	84	123	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:781034-781472	Cluster_5175	Pocillopora_meandrina_HIv1___Sc0000018	781034	781472	439	244	85	0.012295081967213115	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	32	1	242	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:784362-784785	Cluster_5176	Pocillopora_meandrina_HIv1___Sc0000018	784362	784785	424	110	43	0.9636363636363636	+	UGAUUGCAGAGCACAGCAUUGCCACC	16	5	102	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:844184-844586	Cluster_5177	Pocillopora_meandrina_HIv1___Sc0000018	844184	844586	403	94	40	0.6276595744680851	.	GUAUCUGCACUUGACU	21	69	16	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:1177770-1178195	Cluster_5178	Pocillopora_meandrina_HIv1___Sc0000018	1177770	1178195	426	148	65	0.9932432432432432	+	UUUGAUUGACGUACGGUAUUUGAGACGC	15	3	143	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2098006-2098514	Cluster_5179	Pocillopora_meandrina_HIv1___Sc0000018	2098006	2098514	509	7436	1198	0.999596557288865	+	GCUAGUGAUGACAAAAAGAUGACGAGCCUGA	405	1952	3020	644	644	547	629	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2098964-2099438	Cluster_5180	Pocillopora_meandrina_HIv1___Sc0000018	2098964	2099438	475	13755	1035	0.9984005816066884	+	AUAGAAUGAUGAUGCUUUAGACUAGAGU	1958	3163	7487	534	379	1574	618	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2099479-2099957	Cluster_5181	Pocillopora_meandrina_HIv1___Sc0000018	2099479	2099957	479	4342	468	1.0	+	AUAUCUGAUGAAAACCCCUUUCUGACA	448	685	3172	184	123	126	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2100300-2101798	Cluster_5182	Pocillopora_meandrina_HIv1___Sc0000018	2100300	2101798	1499	11467	1707	0.9994767593965291	+	GAUAAGUCACGUCAGUCUGAUU	559	5831	2362	722	1365	645	542	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2102107-2102876	Cluster_5183	Pocillopora_meandrina_HIv1___Sc0000018	2102107	2102876	770	7390	908	1.0	+	GUGGAAUGAUGUAAAAACUU	699	4517	944	600	382	461	486	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2328246-2328664	Cluster_5184	Pocillopora_meandrina_HIv1___Sc0000018	2328246	2328664	419	315	10	0.9936507936507937	+	GGUGUGUGAUGACUGAAA	123	315	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2367661-2368073	Cluster_5185	Pocillopora_meandrina_HIv1___Sc0000018	2367661	2368073	413	280	178	0.007142857142857143	-	CUGACUUGAGGAAAUUGCCAUGAUA	17	106	100	16	15	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2443250-2443676	Cluster_5186	Pocillopora_meandrina_HIv1___Sc0000018	2443250	2443676	427	420	200	0.011904761904761904	-	CAGUGGAAGCGUGCU	23	254	99	24	23	13	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2462000-2462480	Cluster_5187	Pocillopora_meandrina_HIv1___Sc0000018	2462000	2462480	481	424	136	0.9976415094339622	+	AGCAGAUGAUGAUUAUGACC	25	110	143	53	48	38	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2543260-2544876	Cluster_5188	Pocillopora_meandrina_HIv1___Sc0000018	2543260	2544876	1617	5363	1384	0.062092112623531606	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	460	36	5141	10	17	71	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2564907-2565323	Cluster_5189	Pocillopora_meandrina_HIv1___Sc0000018	2564907	2565323	417	535	32	0.0	-	GCUACUUUGACCUCACA	217	535	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2582233-2582685	Cluster_5190	Pocillopora_meandrina_HIv1___Sc0000018	2582233	2582685	453	5739	178	0.0013939710751001916	-	UUUAUUCUGAUAUCAGGGUCACCACCCU	1384	54	4750	154	57	677	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2693273-2693700	Cluster_5191	Pocillopora_meandrina_HIv1___Sc0000018	2693273	2693700	428	125	54	0.992	+	UGAGAUCGUGAUGAAAAUUAUUGCUGGAUU	37	20	93	7	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2695721-2696135	Cluster_5192	Pocillopora_meandrina_HIv1___Sc0000018	2695721	2696135	415	602	30	1.0	+	GCGGAUGUGGCGGAA	347	587	5	2	5	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2797804-2798222	Cluster_5193	Pocillopora_meandrina_HIv1___Sc0000018	2797804	2798222	419	1121	56	0.9991079393398751	+	UGCCCGGGUCCUCCACCA	514	1120	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2808565-2808976	Cluster_5194	Pocillopora_meandrina_HIv1___Sc0000018	2808565	2808976	412	148	88	0.14189189189189189	-	UGAAUUGAUACGUACUCUCUGAUAUCU	9	2	134	0	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2886488-2886905	Cluster_5195	Pocillopora_meandrina_HIv1___Sc0000018	2886488	2886905	418	86	4	0.023255813953488372	-	UUGAACUCGACCCUGUCG	83	85	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3029533-3029960	Cluster_5196	Pocillopora_meandrina_HIv1___Sc0000018	3029533	3029960	428	117	25	0.8547008547008547	+	AUUGAAGAUAUUUCAGCGGCUGAGUUGA	81	2	111	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3274720-3275233	Cluster_5197	Pocillopora_meandrina_HIv1___Sc0000018	3274720	3275233	514	234	143	0.004273504273504274	-	AAUUGAAGUGGAAUAAAAGCA	18	71	60	39	25	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3276305-3276958	Cluster_5198	Pocillopora_meandrina_HIv1___Sc0000018	3276305	3276958	654	355	214	0.008450704225352112	-	UUCGCAUCUCGGGAAGA	21	183	105	17	14	9	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3348228-3348658	Cluster_5199	Pocillopora_meandrina_HIv1___Sc0000018	3348228	3348658	431	1144	80	0.9851398601398601	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	307	5	1129	0	1	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3520326-3520878	Cluster_5200	Pocillopora_meandrina_HIv1___Sc0000018	3520326	3520878	553	1994	149	0.9849548645937813	+	UCGUAUUCUUUUCCAUCCUCGCCGAACAGA	623	3	1960	4	4	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3750631-3751057	Cluster_5201	Pocillopora_meandrina_HIv1___Sc0000018	3750631	3751057	427	201	117	0.8407960199004975	+	UGAGUCGAGGUUAUUCACAAUACGAGC	41	11	171	0	2	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3869724-3870153	Cluster_5202	Pocillopora_meandrina_HIv1___Sc0000018	3869724	3870153	430	243	47	0.0	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	86	3	239	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4194708-4195136	Cluster_5203	Pocillopora_meandrina_HIv1___Sc0000018	4194708	4195136	429	183	8	0.994535519125683	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	157	0	183	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4273656-4274071	Cluster_5204	Pocillopora_meandrina_HIv1___Sc0000018	4273656	4274071	416	1613	15	0.9993800371977681	+	CCGGCUGUCGCACCA	953	1612	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4337764-4338188	Cluster_5205	Pocillopora_meandrina_HIv1___Sc0000018	4337764	4338188	425	615	99	1.0	+	UAGAUCAAGUGUGGUUACUUUAAU	104	54	53	82	113	149	164	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4414758-4415184	Cluster_5206	Pocillopora_meandrina_HIv1___Sc0000018	4414758	4415184	427	207	52	0.0	-	CGCGUUUCGAUCGUCAACGUAGGGGAGG	35	2	202	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4484034-4484452	Cluster_5207	Pocillopora_meandrina_HIv1___Sc0000018	4484034	4484452	419	827	30	0.9939540507859734	+	CGGCCUGAAAAAAAAAA	262	788	1	22	14	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4508024-4508579	Cluster_5208	Pocillopora_meandrina_HIv1___Sc0000018	4508024	4508579	556	5606	584	0.0012486621476988941	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1215	46	5540	3	6	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4508612-4510664	Cluster_5209	Pocillopora_meandrina_HIv1___Sc0000018	4508612	4510664	2053	3174	1315	0.015122873345935728	-	UGACCACGAGCAUUCUGAAUAUCGAGAUUC	73	23	3010	7	25	24	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4564884-4564976	Cluster_5210	Pocillopora_meandrina_HIv1___Sc0000018	4564884	4564976	93	522	63	0.9980842911877394	+	UAACCUUAUUUGUCUUCACAUGU	136	40	0	41	117	268	56	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000018:4621884-4622308	Cluster_5211	Pocillopora_meandrina_HIv1___Sc0000018	4621884	4622308	425	119	44	0.957983193277311	+	UGUUGUAUCAAGCGAAAACCGAGAGA	16	8	103	2	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4692501-4692940	Cluster_5212	Pocillopora_meandrina_HIv1___Sc0000018	4692501	4692940	440	259	138	0.003861003861003861	-	GCAGUCAUUGUGGCAAGUGUGUAAUAUCU	12	47	142	25	24	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4839414-4839830	Cluster_5213	Pocillopora_meandrina_HIv1___Sc0000018	4839414	4839830	417	227	147	1.0	+	AAUUACUCGAGAUCUUGGAACA	12	79	62	12	27	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4870098-4870516	Cluster_5214	Pocillopora_meandrina_HIv1___Sc0000018	4870098	4870516	419	181	97	0.0055248618784530384	-	GGUCAAGGAUGAUAAUCUCU	12	58	51	30	15	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4873669-4874121	Cluster_5215	Pocillopora_meandrina_HIv1___Sc0000018	4873669	4874121	453	901	57	0.9988901220865705	+	UGGUAGAACCAACUUCGUGUCGA	477	19	8	1	97	756	20	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4969282-4969712	Cluster_5216	Pocillopora_meandrina_HIv1___Sc0000018	4969282	4969712	431	177	64	1.0	+	AAACCGAUACUUCUACCGUUCAACCUGAGA	20	28	112	1	15	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5069169-5069664	Cluster_5217	Pocillopora_meandrina_HIv1___Sc0000018	5069169	5069664	496	465	198	0.9978494623655914	+	GUAGUCGUGGCCGAGG	134	322	64	28	23	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5070502-5070916	Cluster_5218	Pocillopora_meandrina_HIv1___Sc0000018	5070502	5070916	415	128	95	0.9921875	+	CGCUUGGUCAAGGACAUGAAGAUCA	4	42	53	7	9	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5071007-5071630	Cluster_5219	Pocillopora_meandrina_HIv1___Sc0000018	5071007	5071630	624	618	372	0.9773462783171522	+	GUACGUCGUGGCUACUGGGGUAACA	41	204	259	36	35	41	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5072027-5072447	Cluster_5220	Pocillopora_meandrina_HIv1___Sc0000018	5072027	5072447	421	318	231	1.0	+	AGGGGAACUGGUAUUGUGUCU	5	129	113	24	24	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5072563-5073052	Cluster_5221	Pocillopora_meandrina_HIv1___Sc0000018	5072563	5073052	490	368	264	0.9945652173913043	+	CCUGGCAAAGAAUCACUCAGGACAGAGAGCU	8	142	133	28	19	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5104121-5105290	Cluster_5222	Pocillopora_meandrina_HIv1___Sc0000018	5104121	5105290	1170	1796	357	0.23942093541202672	.	UCAACGCUUAGCAGACUGGUUUAGUGAUC	230	16	1626	2	8	21	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5127916-5128340	Cluster_5223	Pocillopora_meandrina_HIv1___Sc0000018	5127916	5128340	425	125	25	0.984	+	AGUGAUUGAAAAAAAAAAAAAAAAA	19	3	89	5	3	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5153906-5154329	Cluster_5224	Pocillopora_meandrina_HIv1___Sc0000018	5153906	5154329	424	80	21	0.0	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	47	0	79	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5399537-5399962	Cluster_5225	Pocillopora_meandrina_HIv1___Sc0000018	5399537	5399962	426	121	32	0.01652892561983471	-	AACUACUGCUCGUACUCUAGAUGACAAU	19	1	120	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5727822-5728237	Cluster_5226	Pocillopora_meandrina_HIv1___Sc0000018	5727822	5728237	416	87	23	0.0	-	CAAAUUUGAAAUCUCCGA	37	81	3	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5914049-5914457	Cluster_5227	Pocillopora_meandrina_HIv1___Sc0000018	5914049	5914457	409	85	56	0.35294117647058826	.	UAGCACGACGUUUGGAAUAGG	6	46	6	13	8	12	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5932011-5932789	Cluster_5228	Pocillopora_meandrina_HIv1___Sc0000018	5932011	5932789	779	787	360	0.3799237611181703	.	UGUAUUCACUUGGGUUAACUCUUCCACA	88	17	688	2	9	20	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5933124-5933526	Cluster_5229	Pocillopora_meandrina_HIv1___Sc0000018	5933124	5933526	403	187	117	0.17647058823529413	-	UGGACUCUAUAAUGUCUUUAAACAUGGU	9	3	162	0	3	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5934317-5934745	Cluster_5230	Pocillopora_meandrina_HIv1___Sc0000018	5934317	5934745	429	433	123	0.03233256351039261	-	UGUAGAAUCAAUCUGUUACUAAGACACC	91	1	415	8	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5946594-5947626	Cluster_5231	Pocillopora_meandrina_HIv1___Sc0000018	5946594	5947626	1033	4423	788	0.02667872484738865	-	UGUACUGGUUCUUCAAAUGCUUAACUUUGC	755	33	4250	7	10	55	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5962583-5963374	Cluster_5232	Pocillopora_meandrina_HIv1___Sc0000018	5962583	5963374	792	1779	598	0.3872962338392355	.	UGUAUCUGGUUUUUCUGUCUUGAACAAUG	193	42	1403	30	22	183	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5979022-5979452	Cluster_5233	Pocillopora_meandrina_HIv1___Sc0000018	5979022	5979452	431	1457	89	0.0	-	UUCCAGAACAGAGAACCUCUCCCGAUGACC	608	13	1434	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5985449-5986116	Cluster_5234	Pocillopora_meandrina_HIv1___Sc0000018	5985449	5986116	668	917	170	0.0021810250817884407	-	UCUGGUACUUGGACGAUCAACAUGCC	176	12	892	0	0	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5987227-5987656	Cluster_5235	Pocillopora_meandrina_HIv1___Sc0000018	5987227	5987656	430	196	19	0.0	-	UACGAAACUCAUGAUGACAAACAACAAAUG	113	0	195	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5988897-5989560	Cluster_5236	Pocillopora_meandrina_HIv1___Sc0000018	5988897	5989560	664	259	118	0.019305019305019305	-	UCUCUGCUCCUUGAACUGAUAUUAUGAAGC	29	5	237	4	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5992644-5993138	Cluster_5237	Pocillopora_meandrina_HIv1___Sc0000018	5992644	5993138	495	1339	245	0.004480955937266617	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	253	4	1312	1	2	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6015913-6016348	Cluster_5238	Pocillopora_meandrina_HIv1___Sc0000018	6015913	6016348	436	830	144	0.0036144578313253013	-	UGAUUUAUUCCACUCUGAUAUCGUACAG	227	44	776	2	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6018266-6018690	Cluster_5239	Pocillopora_meandrina_HIv1___Sc0000018	6018266	6018690	425	239	140	0.06276150627615062	-	UGACUUCGUAUCGGUCUUCGCUCCAUGCA	12	3	221	1	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6023501-6023925	Cluster_5240	Pocillopora_meandrina_HIv1___Sc0000018	6023501	6023925	425	125	14	0.96	+	GUGAAGACGAUUAAGUUGACUGGGG	57	4	107	0	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6024504-6024931	Cluster_5241	Pocillopora_meandrina_HIv1___Sc0000018	6024504	6024931	428	221	66	0.07692307692307693	-	UGAUGUCUGCUACUUCCUCUUUUUCAGG	35	6	204	1	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6024959-6025753	Cluster_5242	Pocillopora_meandrina_HIv1___Sc0000018	6024959	6025753	795	1193	374	0.3755238893545683	.	ACAUGACUUAUCUCCAGAAGAAUUUGAGG	93	20	1054	9	39	16	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6026054-6026481	Cluster_5243	Pocillopora_meandrina_HIv1___Sc0000018	6026054	6026481	428	200	108	0.11	-	UCAUCUUUAGUAAAACUGAAAACGUUGUGGA	14	3	185	2	1	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6041457-6042847	Cluster_5244	Pocillopora_meandrina_HIv1___Sc0000018	6041457	6042847	1391	2923	698	0.12624016421484777	-	UUUCAAAUGCUUUUGUAGAUCAUCUCCAAA	483	55	2776	7	13	33	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6044345-6045176	Cluster_5245	Pocillopora_meandrina_HIv1___Sc0000018	6044345	6045176	832	446	167	0.08744394618834081	-	UUCUGAAGUACUUUCCCAAUAACAUUGAAA	54	9	409	2	2	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6045201-6045601	Cluster_5246	Pocillopora_meandrina_HIv1___Sc0000018	6045201	6045601	401	210	113	0.17142857142857143	-	UUGUAACAAUGUAAAAACGCAAAGAGU	12	3	179	2	6	15	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6049532-6049986	Cluster_5247	Pocillopora_meandrina_HIv1___Sc0000018	6049532	6049986	455	262	86	0.003816793893129771	-	UGAUCUGCUCGAACGUGACUUAGCACUAC	29	2	250	1	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6052018-6052435	Cluster_5248	Pocillopora_meandrina_HIv1___Sc0000018	6052018	6052435	418	102	41	0.0	-	UGACAGUGCGUGAUCUUCUCUUGAUGUU	21	2	95	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6052990-6053419	Cluster_5249	Pocillopora_meandrina_HIv1___Sc0000018	6052990	6053419	430	241	109	0.004149377593360996	-	UCUAGUUAACGGUUUGUCUUUGAGAACGAC	37	5	229	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6054042-6054708	Cluster_5250	Pocillopora_meandrina_HIv1___Sc0000018	6054042	6054708	667	295	108	0.0	-	UUGGACUGUGCAGCCUUAAUCAGGAACAAC	73	22	212	43	11	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6055724-6056149	Cluster_5251	Pocillopora_meandrina_HIv1___Sc0000018	6055724	6056149	426	91	45	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	13	0	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6060238-6060667	Cluster_5252	Pocillopora_meandrina_HIv1___Sc0000018	6060238	6060667	430	206	74	0.0	-	UUCACGUGCUUGACUCUUUCACCCCAGAUA	27	6	198	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6060683-6061195	Cluster_5253	Pocillopora_meandrina_HIv1___Sc0000018	6060683	6061195	513	308	106	0.006493506493506494	-	UGAGACUAUAGAGCCUGCUACAAUUAAGGU	43	49	250	2	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6061223-6061651	Cluster_5254	Pocillopora_meandrina_HIv1___Sc0000018	6061223	6061651	429	124	40	0.0	-	UUGAUUUCUGCUUCAAGGGACUGUUGUGG	49	3	121	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6066391-6066818	Cluster_5255	Pocillopora_meandrina_HIv1___Sc0000018	6066391	6066818	428	185	77	0.016216216216216217	-	UGUUUGUCGAUUAGGCUGAGAAAUUUGUGU	12	30	144	4	5	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6067322-6067752	Cluster_5256	Pocillopora_meandrina_HIv1___Sc0000018	6067322	6067752	431	1352	128	0.005917159763313609	-	UGACUCAACUUUACGUAACUUAUGGCUUU	250	14	1286	0	4	9	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6068424-6068852	Cluster_5257	Pocillopora_meandrina_HIv1___Sc0000018	6068424	6068852	429	153	57	0.0718954248366013	-	CAGGUAUAGGUUACUCAAGAUUAAUUGAU	42	5	134	3	7	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6073845-6074272	Cluster_5258	Pocillopora_meandrina_HIv1___Sc0000018	6073845	6074272	428	318	120	0.006289308176100629	-	UAGGACAGUACAUGGUGUAGCUACCAUCAUC	43	7	307	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6075188-6075808	Cluster_5259	Pocillopora_meandrina_HIv1___Sc0000018	6075188	6075808	621	395	137	0.015189873417721518	-	UGCGAACUCCAAACUUUCUGUAUCCACAGC	46	11	377	0	4	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6083879-6084581	Cluster_5260	Pocillopora_meandrina_HIv1___Sc0000018	6083879	6084581	703	527	151	0.028462998102466792	-	UAUGACGGUACUUUCAAUGGCUUCAGGC	145	11	483	4	11	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6085167-6085592	Cluster_5261	Pocillopora_meandrina_HIv1___Sc0000018	6085167	6085592	426	195	87	0.005128205128205128	-	UUUGAUUGACGUACGGUAUUUGAGACGC	25	5	179	0	5	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6086451-6088566	Cluster_5262	Pocillopora_meandrina_HIv1___Sc0000018	6086451	6088566	2116	20993	3800	0.019387414852569906	-	UGUGAUCUUGUAGAGUUUCAGAAAAUGA	1643	181	20279	55	64	191	223	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6090996-6091424	Cluster_5263	Pocillopora_meandrina_HIv1___Sc0000018	6090996	6091424	429	297	128	0.020202020202020204	-	CUGUUGCUGAAUUCGAUACCCAUUUUCGG	19	7	285	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6092880-6093306	Cluster_5264	Pocillopora_meandrina_HIv1___Sc0000018	6092880	6093306	427	225	97	0.02666666666666667	-	UUGGCUGUGCUUUGCUGAAUCUUGUCC	16	5	218	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6098947-6099535	Cluster_5265	Pocillopora_meandrina_HIv1___Sc0000018	6098947	6099535	589	241	114	0.0	-	UCCUCGAUCUCGUUUUGAAUAGUUUCAAC	23	3	236	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6100825-6101227	Cluster_5266	Pocillopora_meandrina_HIv1___Sc0000018	6100825	6101227	403	187	103	0.0	-	UGGCAGUAGAAUGGGGUUCCUCGAGUUC	8	4	181	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6103919-6104805	Cluster_5267	Pocillopora_meandrina_HIv1___Sc0000018	6103919	6104805	887	2491	360	0.042151746286631875	-	AUCCCACUCCUGACACCA	617	1410	1017	7	4	11	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6108752-6109178	Cluster_5268	Pocillopora_meandrina_HIv1___Sc0000018	6108752	6109178	427	108	21	0.018518518518518517	-	UAACCCGAGAACUGACACGUGAGUAGUC	59	0	99	2	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6110873-6111291	Cluster_5269	Pocillopora_meandrina_HIv1___Sc0000018	6110873	6111291	419	189	82	0.005291005291005291	-	UCUUUAAUCUUGUGUAGUACUCCUAUCAGU	22	4	181	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6111313-6111742	Cluster_5270	Pocillopora_meandrina_HIv1___Sc0000018	6111313	6111742	430	240	114	0.004166666666666667	-	UGACUCUUGGUAAUCUGAACUGAUCUC	21	11	224	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6112787-6113215	Cluster_5271	Pocillopora_meandrina_HIv1___Sc0000018	6112787	6113215	429	134	39	0.014925373134328358	-	AUCCUGUACAAUUCUGUAUAUCAGACCAUG	36	6	119	0	5	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6161081-6161508	Cluster_5272	Pocillopora_meandrina_HIv1___Sc0000018	6161081	6161508	428	81	26	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	24	0	77	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6211846-6212259	Cluster_5273	Pocillopora_meandrina_HIv1___Sc0000018	6211846	6212259	414	78	5	1.0	+	GUCUGGAGUCUCGGU	48	78	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6241773-6242189	Cluster_5274	Pocillopora_meandrina_HIv1___Sc0000018	6241773	6242189	417	167	22	0.0658682634730539	-	CGUGGUGGACUGCUUAC	116	163	2	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6362099-6362513	Cluster_5275	Pocillopora_meandrina_HIv1___Sc0000018	6362099	6362513	415	94	10	0.010638297872340425	-	CCACUCUGAUCACCA	36	94	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6492736-6493260	Cluster_5276	Pocillopora_meandrina_HIv1___Sc0000018	6492736	6493260	525	1276	160	0.9984326018808778	+	CGACCAAAAAUCUUCUAGUGGGGGCUGGA	695	13	1230	6	15	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6621206-6621632	Cluster_5277	Pocillopora_meandrina_HIv1___Sc0000018	6621206	6621632	427	125	32	0.0	-	UCUAAGACAAUAAUUGGUACUGCAACGAGU	30	1	124	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6654230-6655045	Cluster_5278	Pocillopora_meandrina_HIv1___Sc0000018	6654230	6655045	816	211	53	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	52	2	209	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6671296-6671836	Cluster_5279	Pocillopora_meandrina_HIv1___Sc0000018	6671296	6671836	541	580	250	0.8413793103448276	+	UGUAUGAUGUUCAGGAUUUCAGGUCUGA	28	38	506	2	5	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6672102-6672809	Cluster_5280	Pocillopora_meandrina_HIv1___Sc0000018	6672102	6672809	708	1978	421	0.9398382204246714	+	UGAUGUGAUUUCCUGUUUGACUUGGUU	165	21	1887	5	11	22	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6674040-6674467	Cluster_5281	Pocillopora_meandrina_HIv1___Sc0000018	6674040	6674467	428	257	133	0.8443579766536965	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	31	3	233	1	1	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6855499-6855592	Cluster_5282	Pocillopora_meandrina_HIv1___Sc0000018	6855499	6855592	94	6818	305	1.0	+	GGAUUAAAAUUUGUUGGGUGUGC	1218	740	316	516	435	3365	1446	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000018:6857660-6858086	Cluster_5283	Pocillopora_meandrina_HIv1___Sc0000018	6857660	6858086	427	19692	326	1.0	+	CUCCGAACAGUUUUAGUCUGA	5559	4276	138	6383	1435	4617	2843	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6967802-6968229	Cluster_5284	Pocillopora_meandrina_HIv1___Sc0000018	6967802	6968229	428	82	17	0.0	-	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	41	0	81	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6980526-6981623	Cluster_5285	Pocillopora_meandrina_HIv1___Sc0000018	6980526	6981623	1098	1669	505	0.14140203714799282	-	UCCUUGAGCAUUAUAGAAAACUGGGCUUA	129	39	1353	65	43	97	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6981728-6982155	Cluster_5286	Pocillopora_meandrina_HIv1___Sc0000018	6981728	6982155	428	384	122	0.09114583333333333	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	72	3	364	1	1	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7025700-7026116	Cluster_5287	Pocillopora_meandrina_HIv1___Sc0000018	7025700	7026116	417	188	28	0.9946808510638298	+	UCCGGCUCGAAGGACCAU	50	185	1	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7138820-7139235	Cluster_5288	Pocillopora_meandrina_HIv1___Sc0000018	7138820	7139235	416	304	217	0.9901315789473685	+	AUAAGAUGUUGUCGUGUGCU	7	123	100	19	26	15	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7256420-7256834	Cluster_5289	Pocillopora_meandrina_HIv1___Sc0000018	7256420	7256834	415	107	16	0.7757009345794392	.	GACGAAGUGGCCGAG	48	81	4	0	18	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7593444-7593872	Cluster_5290	Pocillopora_meandrina_HIv1___Sc0000018	7593444	7593872	429	160	89	0.99375	+	GAUGACUACGUUAAAAGAUUACUGAACGCU	20	27	109	2	11	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7623762-7624181	Cluster_5291	Pocillopora_meandrina_HIv1___Sc0000018	7623762	7624181	420	85	34	0.9647058823529412	+	CUGUUAGAACCUGACCAAGCAU	11	10	25	14	14	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7694980-7695392	Cluster_5292	Pocillopora_meandrina_HIv1___Sc0000018	7694980	7695392	413	87	31	0.05747126436781609	-	AACUACUGCUCGUACUCUAGAUAUGAU	20	14	69	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7843989-7844410	Cluster_5293	Pocillopora_meandrina_HIv1___Sc0000018	7843989	7844410	422	4322	99	0.9988431281813975	+	UGAAAAUCUUUGCUCUGA	1409	3827	0	414	32	6	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7849913-7850379	Cluster_5294	Pocillopora_meandrina_HIv1___Sc0000018	7849913	7850379	467	324	155	0.018518518518518517	-	GUCAGGAUGGCCGAGC	31	230	42	17	29	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7852651-7853079	Cluster_5295	Pocillopora_meandrina_HIv1___Sc0000018	7852651	7853079	429	2745	88	1.0	+	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1702	1	2740	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7863900-7864328	Cluster_5296	Pocillopora_meandrina_HIv1___Sc0000018	7863900	7864328	429	189	63	0.9735449735449735	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	60	0	177	1	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7864532-7864959	Cluster_5297	Pocillopora_meandrina_HIv1___Sc0000018	7864532	7864959	428	182	66	0.8791208791208791	+	ACAAGCGAUAUGUGGACCUUGAUCUGCGA	34	0	178	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7869456-7869886	Cluster_5298	Pocillopora_meandrina_HIv1___Sc0000018	7869456	7869886	431	243	53	0.9629629629629629	+	UGUGAUUUAAACGAGUCUUUACUCUGUCUU	42	2	236	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7939224-7939626	Cluster_5299	Pocillopora_meandrina_HIv1___Sc0000018	7939224	7939626	403	130	81	0.03076923076923077	-	UAUUUGUGGAGGUCUUUGACGAUGGUAAA	10	1	121	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7966082-7967275	Cluster_5300	Pocillopora_meandrina_HIv1___Sc0000018	7966082	7967275	1194	1171	486	0.07258753202391119	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	96	14	1086	1	3	20	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7967561-7969176	Cluster_5301	Pocillopora_meandrina_HIv1___Sc0000018	7967561	7969176	1616	2832	1062	0.0681497175141243	-	UCGGACAUGACGUGUGAAAGAACCGCGCC	110	21	2674	8	9	39	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7969310-7969754	Cluster_5302	Pocillopora_meandrina_HIv1___Sc0000018	7969310	7969754	445	348	154	0.03735632183908046	-	UGACUAUCUGUUCUGGAAUUCCAAAUC	20	1	341	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7999960-8000374	Cluster_5303	Pocillopora_meandrina_HIv1___Sc0000018	7999960	8000374	415	115	5	0.991304347826087	+	AAAUCGGCCGUGGAC	98	114	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8063916-8065982	Cluster_5304	Pocillopora_meandrina_HIv1___Sc0000018	8063916	8065982	2067	5952	1433	0.08702956989247312	-	UGUGAAUACUUCAGCUGGCCAACGAUC	844	142	5373	65	58	115	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8066079-8066502	Cluster_5305	Pocillopora_meandrina_HIv1___Sc0000018	8066079	8066502	424	670	97	0.028358208955223882	-	AAGGAAACUCUCACGUAUGAAGA	315	133	92	5	39	371	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8128517-8129091	Cluster_5306	Pocillopora_meandrina_HIv1___Sc0000018	8128517	8129091	575	912	297	0.17105263157894737	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	118	10	854	3	4	21	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8129368-8129860	Cluster_5307	Pocillopora_meandrina_HIv1___Sc0000018	8129368	8129860	493	962	270	0.12785862785862787	-	UAUAUAUCCUCUGUGAUUGUCUGAUCAC	191	6	889	3	8	25	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8130166-8131142	Cluster_5308	Pocillopora_meandrina_HIv1___Sc0000018	8130166	8131142	977	1105	260	0.08416289592760182	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	144	11	1058	0	3	7	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8131536-8132215	Cluster_5309	Pocillopora_meandrina_HIv1___Sc0000018	8131536	8132215	680	307	164	0.09771986970684039	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	25	2	278	5	5	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8253602-8254028	Cluster_5310	Pocillopora_meandrina_HIv1___Sc0000018	8253602	8254028	427	168	82	0.8869047619047619	+	UUGUUGAUUUUCUCUUGAAGAGUUUGGA	14	3	161	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8255315-8255732	Cluster_5311	Pocillopora_meandrina_HIv1___Sc0000018	8255315	8255732	418	152	25	0.9868421052631579	+	GGCCGUGGUCGAGGUGAA	42	148	2	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8312293-8312720	Cluster_5312	Pocillopora_meandrina_HIv1___Sc0000018	8312293	8312720	428	159	33	0.9622641509433962	+	UCUUGCUUUGGGCUAACGAUAAGACGUG	37	1	153	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8324947-8325369	Cluster_5313	Pocillopora_meandrina_HIv1___Sc0000018	8324947	8325369	423	121	50	0.7768595041322314	.	UCGUGCAAUUUUGAGAACUUUCA	61	16	17	2	6	73	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8380667-8381089	Cluster_5314	Pocillopora_meandrina_HIv1___Sc0000018	8380667	8381089	423	378	60	0.9788359788359788	+	UUCGCGUCUGAAGCUGUUAGAGU	151	41	13	10	86	222	6	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8453579-8454328	Cluster_5315	Pocillopora_meandrina_HIv1___Sc0000018	8453579	8454328	750	808	258	0.9764851485148515	+	UGUGCAAUGAACGAUCUUUCCGACAGGU	75	0	790	0	2	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8454611-8455933	Cluster_5316	Pocillopora_meandrina_HIv1___Sc0000018	8454611	8455933	1323	1597	712	0.9298685034439574	+	UCUGUACAGGAAUUAUACGAAUAAUGGC	44	19	1496	12	5	16	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8546193-8547405	Cluster_5317	Pocillopora_meandrina_HIv1___Sc0000018	8546193	8547405	1213	1826	575	0.11993428258488499	-	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	457	27	1712	6	12	18	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8547654-8548774	Cluster_5318	Pocillopora_meandrina_HIv1___Sc0000018	8547654	8548774	1121	640	304	0.1203125	-	UGUGUCAGAACCCGGCUUGCAUAAGUGA	99	12	577	4	8	26	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8548969-8549396	Cluster_5319	Pocillopora_meandrina_HIv1___Sc0000018	8548969	8549396	428	155	72	0.01935483870967742	-	UAGGUAUACCGUGAUUGGAGAAAUGGCGU	21	0	153	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8549583-8550019	Cluster_5320	Pocillopora_meandrina_HIv1___Sc0000018	8549583	8550019	437	2194	325	0.009115770282588878	-	UGAUGUAACCGUGAUCUUUGAAGGCCCGA	414	5	2131	9	4	9	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8573136-8573551	Cluster_5321	Pocillopora_meandrina_HIv1___Sc0000018	8573136	8573551	416	172	4	0.9941860465116279	+	CGCGGGAUAGAGCAGU	155	172	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8575007-8575423	Cluster_5322	Pocillopora_meandrina_HIv1___Sc0000018	8575007	8575423	417	173	20	0.0	-	AGCGUGGCUAGUUGACU	55	173	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:18658-19086	Cluster_5323	Pocillopora_meandrina_HIv1___Sc0000019	18658	19086	429	173	41	0.011560693641618497	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	76	2	163	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:37218-37646	Cluster_5324	Pocillopora_meandrina_HIv1___Sc0000019	37218	37646	429	189	45	0.005291005291005291	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	80	1	171	1	1	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:55061-55491	Cluster_5325	Pocillopora_meandrina_HIv1___Sc0000019	55061	55491	431	383	67	0.005221932114882507	-	UGAUGAGCGAUAUCGCAGAACAGCUGCUGA	63	1	379	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:55801-56229	Cluster_5326	Pocillopora_meandrina_HIv1___Sc0000019	55801	56229	429	180	41	0.016666666666666666	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	74	0	171	0	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:75218-76278	Cluster_5327	Pocillopora_meandrina_HIv1___Sc0000019	75218	76278	1061	3134	688	0.6177409061901723	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	386	39	2892	10	48	48	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:154260-154856	Cluster_5328	Pocillopora_meandrina_HIv1___Sc0000019	154260	154856	597	5558	516	0.9965815041381793	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	854	17	5492	1	2	14	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:173786-174200	Cluster_5329	Pocillopora_meandrina_HIv1___Sc0000019	173786	174200	415	101	8	0.9900990099009901	+	UUCCGAGGUCGCGGG	71	101	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:182875-183304	Cluster_5330	Pocillopora_meandrina_HIv1___Sc0000019	182875	183304	430	332	40	0.0	-	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	144	0	332	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:187362-187790	Cluster_5331	Pocillopora_meandrina_HIv1___Sc0000019	187362	187790	429	118	46	0.0	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	32	0	109	1	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:213664-214087	Cluster_5332	Pocillopora_meandrina_HIv1___Sc0000019	213664	214087	424	1534	94	1.0	+	UACAAAAUGUGCUUCAGGUCCAAU	647	120	38	103	60	308	905	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:410966-411377	Cluster_5333	Pocillopora_meandrina_HIv1___Sc0000019	410966	411377	412	256	175	0.0	-	CUUCUGUUCUGGAAAUUCUUGACA	8	64	128	18	10	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:412392-413053	Cluster_5334	Pocillopora_meandrina_HIv1___Sc0000019	412392	413053	662	523	374	0.0038240917782026767	-	CUCGGCUUUUGUGGAGAGGGU	19	165	164	62	42	44	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:414464-414890	Cluster_5335	Pocillopora_meandrina_HIv1___Sc0000019	414464	414890	427	326	218	0.003067484662576687	-	AUCGAGUUUGGAGAGCUGUAAGGAGUUGA	13	99	132	33	18	18	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:422641-423056	Cluster_5336	Pocillopora_meandrina_HIv1___Sc0000019	422641	423056	416	166	14	0.012048192771084338	-	GAUGAGGCUCAUAAAA	56	165	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:454049-454847	Cluster_5337	Pocillopora_meandrina_HIv1___Sc0000019	454049	454847	799	1485	497	0.05589225589225589	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	188	21	1370	9	17	26	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:646583-647106	Cluster_5338	Pocillopora_meandrina_HIv1___Sc0000019	646583	647106	524	1345	225	0.020074349442379184	-	UUUGAUAUAAAGGUUGUGGAAAAACAGU	155	12	1254	7	8	35	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:697656-698070	Cluster_5339	Pocillopora_meandrina_HIv1___Sc0000019	697656	698070	415	83	22	0.060240963855421686	-	UGGCACUUGAAUUCUAC	25	47	24	8	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:813193-813621	Cluster_5340	Pocillopora_meandrina_HIv1___Sc0000019	813193	813621	429	433	129	0.03926096997690531	-	UGUAGAAUCAAUCUGUUACUAAGACACC	107	2	415	7	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:904555-904984	Cluster_5341	Pocillopora_meandrina_HIv1___Sc0000019	904555	904984	430	177	42	0.005649717514124294	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	70	2	175	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:905738-906334	Cluster_5342	Pocillopora_meandrina_HIv1___Sc0000019	905738	906334	597	5549	493	0.0030636150657776177	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	825	22	5471	7	4	9	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1035043-1035449	Cluster_5343	Pocillopora_meandrina_HIv1___Sc0000019	1035043	1035449	407	167	113	0.011976047904191617	-	AACAGAAACUGACGCGUCA	9	61	63	11	14	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1236348-1236769	Cluster_5344	Pocillopora_meandrina_HIv1___Sc0000019	1236348	1236769	422	302	138	0.9966887417218543	+	GGUGUCUGAAUCUGACUGAGA	58	83	64	78	29	37	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1262957-1263485	Cluster_5345	Pocillopora_meandrina_HIv1___Sc0000019	1262957	1263485	529	3355	824	0.0038748137108792846	-	GUUUGAUGAUGACUUCUGCCAUGCU	159	1097	1162	204	189	186	517	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1280313-1280734	Cluster_5346	Pocillopora_meandrina_HIv1___Sc0000019	1280313	1280734	422	498	62	0.9698795180722891	+	UGGAAUAAUAAUAGUGGUACU	192	33	0	286	158	19	2	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1446512-1447028	Cluster_5347	Pocillopora_meandrina_HIv1___Sc0000019	1446512	1447028	517	16147	565	0.9554096736235833	+	CGAUCCAACAAGAACAAUAUGUGCUGACC	3744	62	15690	19	97	55	224	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1824339-1824956	Cluster_5348	Pocillopora_meandrina_HIv1___Sc0000019	1824339	1824956	618	555	244	0.372972972972973	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	62	5	491	0	4	15	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1884122-1884540	Cluster_5349	Pocillopora_meandrina_HIv1___Sc0000019	1884122	1884540	419	2683	111	0.9988818486768543	+	CGCUACUUUGACCUCAUU	746	2677	1	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1960329-1960763	Cluster_5350	Pocillopora_meandrina_HIv1___Sc0000019	1960329	1960763	435	1251	275	0.0007993605115907274	-	GAAUAAUUUUGUUGAGGUGCAUUAUCUGACU	134	149	958	44	30	28	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1960846-1961285	Cluster_5351	Pocillopora_meandrina_HIv1___Sc0000019	1960846	1961285	440	1184	259	0.002533783783783784	-	UUUUGAUGUUGAGAUGCAGUUAUCUGACU	128	67	1024	29	22	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1990219-1990640	Cluster_5352	Pocillopora_meandrina_HIv1___Sc0000019	1990219	1990640	422	1390	58	1.0	+	UCUGACGAAGGGCUGACACUCA	821	30	0	422	896	28	14	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1996128-1996560	Cluster_5353	Pocillopora_meandrina_HIv1___Sc0000019	1996128	1996560	433	235	104	0.225531914893617	.	UGCCAGAAGUGUGAAACUACUUGAACCG	20	7	221	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2008390-2008806	Cluster_5354	Pocillopora_meandrina_HIv1___Sc0000019	2008390	2008806	417	246	35	0.9959349593495935	+	AAAGAAGUACAAGUGAU	140	205	14	0	22	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2023002-2023431	Cluster_5355	Pocillopora_meandrina_HIv1___Sc0000019	2023002	2023431	430	327	67	0.9663608562691132	+	GGCAGUGGUUUUUUGGAUUCUGAUCAGUGU	93	8	309	3	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2026998-2027430	Cluster_5356	Pocillopora_meandrina_HIv1___Sc0000019	2026998	2027430	433	337	122	0.3115727002967359	.	AAGUGUGAAACUACUUGAACCGGUUCG	26	8	316	0	1	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2048332-2048767	Cluster_5357	Pocillopora_meandrina_HIv1___Sc0000019	2048332	2048767	436	736	148	0.9144021739130435	+	GGCAGUGGUUUUUUGGAUUCUGAUCAGUGU	132	18	697	10	5	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2052530-2052967	Cluster_5358	Pocillopora_meandrina_HIv1___Sc0000019	2052530	2052967	438	370	161	0.35405405405405405	.	AUCUACUACAGAUCGCUUGAUGGAUUGCA	31	24	328	4	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2099238-2099678	Cluster_5359	Pocillopora_meandrina_HIv1___Sc0000019	2099238	2099678	441	516	118	0.25387596899224807	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	190	2	495	2	2	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2167305-2167718	Cluster_5360	Pocillopora_meandrina_HIv1___Sc0000019	2167305	2167718	414	80	32	0.0125	-	ACUUUGACCUCAUUU	21	79	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2393898-2394310	Cluster_5361	Pocillopora_meandrina_HIv1___Sc0000019	2393898	2394310	413	75	7	0.0	-	GUGUGUCUCUCUGUCC	31	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2423518-2424063	Cluster_5362	Pocillopora_meandrina_HIv1___Sc0000019	2423518	2424063	546	3543	404	0.036974315551792265	-	UCGAUUCGUAAACUGUGCCAAUGGUUGUC	551	41	3440	6	12	13	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2426209-2426803	Cluster_5363	Pocillopora_meandrina_HIv1___Sc0000019	2426209	2426803	595	579	207	0.1692573402417962	-	UGUAAUAAAGUAUCUGUAACACCUGAUGGGC	71	5	555	0	1	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2463849-2464507	Cluster_5364	Pocillopora_meandrina_HIv1___Sc0000019	2463849	2464507	659	25037	730	0.0	-	UUUCCAUAUUUGAACGCUGACGACAGUACGU	4968	11	24745	6	10	123	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2480011-2480551	Cluster_5365	Pocillopora_meandrina_HIv1___Sc0000019	2480011	2480551	541	604	154	0.2152317880794702	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	199	1	573	9	2	1	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2566821-2567246	Cluster_5366	Pocillopora_meandrina_HIv1___Sc0000019	2566821	2567246	426	221	118	0.0	-	GAUGGAUGACCUUGAAUGAUGGGAGCA	19	46	110	11	9	30	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2716498-2716927	Cluster_5367	Pocillopora_meandrina_HIv1___Sc0000019	2716498	2716927	430	110	31	0.9454545454545454	+	GUGAGUCUGAUACAUCUUGCCGCACAUGGA	62	0	104	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2737294-2737718	Cluster_5368	Pocillopora_meandrina_HIv1___Sc0000019	2737294	2737718	425	246	33	0.0	-	AGGGACUGAAACAUCGACUGAAGACA	59	6	79	36	1	31	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2823636-2824052	Cluster_5369	Pocillopora_meandrina_HIv1___Sc0000019	2823636	2824052	417	133	9	1.0	+	UAGAAUGUUUACUCGUG	121	133	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2861479-2861905	Cluster_5370	Pocillopora_meandrina_HIv1___Sc0000019	2861479	2861905	427	189	74	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	19	6	173	0	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2977964-2978402	Cluster_5371	Pocillopora_meandrina_HIv1___Sc0000019	2977964	2978402	439	439	175	0.0	-	UCCUAAAUCGAUCUUAUCUGUCUGUAAUU	37	3	403	4	2	21	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3051036-3051453	Cluster_5372	Pocillopora_meandrina_HIv1___Sc0000019	3051036	3051453	418	109	20	0.03669724770642202	-	CACUCCCUAGACCUCAUU	64	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3338502-3338909	Cluster_5373	Pocillopora_meandrina_HIv1___Sc0000019	3338502	3338909	408	189	103	0.015873015873015872	-	UCUUCGUACGGUGUGCUCGCAUGACUUCAAU	10	2	181	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3406670-3407099	Cluster_5374	Pocillopora_meandrina_HIv1___Sc0000019	3406670	3407099	430	863	145	0.9953650057937428	+	AAAAGAACGAAGAAGCUGCCAAGA	235	20	325	105	8	70	335	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3506639-3507081	Cluster_5375	Pocillopora_meandrina_HIv1___Sc0000019	3506639	3507081	443	260	106	0.6038461538461538	.	UGUGACACUUUGAGACACUCGUGAGACA	33	2	236	5	2	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3563986-3564415	Cluster_5376	Pocillopora_meandrina_HIv1___Sc0000019	3563986	3564415	430	135	37	0.0	-	UGUACUGUGAACAUAGUGUUACCAACCAUU	70	0	135	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3566354-3567050	Cluster_5377	Pocillopora_meandrina_HIv1___Sc0000019	3566354	3567050	697	1779	303	0.03541315345699832	-	UUGGACGCGUUGCUUGUCUGAACAAGGC	196	8	1613	101	4	25	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3567084-3567520	Cluster_5378	Pocillopora_meandrina_HIv1___Sc0000019	3567084	3567520	437	325	123	0.036923076923076927	-	UGAUCAUGCCGUCUGAUGCUAUGCCUUU	69	0	318	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3593610-3594039	Cluster_5379	Pocillopora_meandrina_HIv1___Sc0000019	3593610	3594039	430	434	92	0.002304147465437788	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	66	33	300	91	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3721232-3721657	Cluster_5380	Pocillopora_meandrina_HIv1___Sc0000019	3721232	3721657	426	118	25	0.0	-	UCUUUCUGUGUUCAGUAGUGAUCUGCAUC	34	1	117	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3735302-3735776	Cluster_5381	Pocillopora_meandrina_HIv1___Sc0000019	3735302	3735776	475	259	105	0.015444015444015444	-	UGAAUCUUGAUGUGAGUGCUGUCAACACA	37	4	246	2	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3736324-3736752	Cluster_5382	Pocillopora_meandrina_HIv1___Sc0000019	3736324	3736752	429	1042	137	0.016314779270633396	-	UGUUGAACUCUUGCUGCUUGUCAGUGAC	524	7	996	0	28	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3740698-3741217	Cluster_5383	Pocillopora_meandrina_HIv1___Sc0000019	3740698	3741217	520	953	270	0.19517313746065057	-	UGAUAUGACCUUCGGCAAAAAACUGGA	90	8	836	4	5	27	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3741222-3741663	Cluster_5384	Pocillopora_meandrina_HIv1___Sc0000019	3741222	3741663	442	644	204	0.11335403726708075	-	UGUAACUGGUUCACUGCGAUUUUGUAGU	105	13	601	2	3	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3741680-3742486	Cluster_5385	Pocillopora_meandrina_HIv1___Sc0000019	3741680	3742486	807	494	262	0.39271255060728744	.	AGAGAGAAUAACUGACAAUGAUGU	43	9	359	5	9	24	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3744261-3745833	Cluster_5386	Pocillopora_meandrina_HIv1___Sc0000019	3744261	3745833	1573	3573	950	0.7637839350685698	.	UUGGUUCGGUUGUUGUCACUUUUGAAGU	261	86	3224	22	24	59	158	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3746116-3746545	Cluster_5387	Pocillopora_meandrina_HIv1___Sc0000019	3746116	3746545	430	230	121	0.1782608695652174	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	2	205	3	2	2	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3747775-3748476	Cluster_5388	Pocillopora_meandrina_HIv1___Sc0000019	3747775	3748476	702	262	139	0.04580152671755725	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	28	1	253	0	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3750256-3750997	Cluster_5389	Pocillopora_meandrina_HIv1___Sc0000019	3750256	3750997	742	600	235	0.885	+	UCGCUGUAUUAAUGAACGCUUUUUCGGGA	69	9	547	3	6	9	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3756008-3758566	Cluster_5390	Pocillopora_meandrina_HIv1___Sc0000019	3756008	3758566	2559	4453	1336	0.04918032786885246	-	CUCCAUCUUGUCUGUUGAGUUCAACACC	171	56	4194	16	12	76	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3764466-3764886	Cluster_5391	Pocillopora_meandrina_HIv1___Sc0000019	3764466	3764886	421	130	63	0.023076923076923078	-	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	23	3	120	0	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3765660-3766696	Cluster_5392	Pocillopora_meandrina_HIv1___Sc0000019	3765660	3766696	1037	2350	689	0.07361702127659575	-	UCCAAGUUCUUCAUUUAAAAUUUCUGCA	123	45	2142	35	11	43	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3766787-3767719	Cluster_5393	Pocillopora_meandrina_HIv1___Sc0000019	3766787	3767719	933	1330	436	0.15413533834586465	-	UGUGUGUUGAUGACAUCUUUGGGUAAAA	104	25	1139	8	15	55	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3769158-3769591	Cluster_5394	Pocillopora_meandrina_HIv1___Sc0000019	3769158	3769591	434	273	111	0.16117216117216118	-	UGUGAUUUCAACUGUGAGUGUCAGAA	21	10	235	2	3	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3769609-3770163	Cluster_5395	Pocillopora_meandrina_HIv1___Sc0000019	3769609	3770163	555	1161	264	0.02153316106804479	-	UGCUUGACUUAUAGUCACUGUACAACUGACU	141	9	1140	1	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3773356-3773782	Cluster_5396	Pocillopora_meandrina_HIv1___Sc0000019	3773356	3773782	427	212	99	0.0	-	UCGGAAACUCUGUCGCUCUCUUAUAUUCU	17	9	196	0	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3774114-3774760	Cluster_5397	Pocillopora_meandrina_HIv1___Sc0000019	3774114	3774760	647	2434	410	0.010682004930156122	-	UCCAACUGUCAUGAACUUGUUACAAUUUAC	242	27	2341	5	13	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3775176-3775611	Cluster_5398	Pocillopora_meandrina_HIv1___Sc0000019	3775176	3775611	436	996	117	0.001004016064257028	-	UAAUAUCAUCUUACAAAUGUUUAGGACAGG	278	7	983	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3776588-3777012	Cluster_5399	Pocillopora_meandrina_HIv1___Sc0000019	3776588	3777012	425	157	69	0.006369426751592357	-	UGUUCUCUGCGAUGUGAUAGAAUCCACGUGC	27	9	142	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3777318-3777835	Cluster_5400	Pocillopora_meandrina_HIv1___Sc0000019	3777318	3777835	518	412	160	0.024271844660194174	-	UCUUAUCUGCAAGAUGCUUCUGGAAACGC	30	9	391	0	1	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3779714-3781221	Cluster_5401	Pocillopora_meandrina_HIv1___Sc0000019	3779714	3781221	1508	30531	3185	0.04899937768170057	-	UGUGAAACCCCGGUCUGCCAUAACCAUGUC	3785	381	28994	94	204	275	583	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3782569-3783025	Cluster_5402	Pocillopora_meandrina_HIv1___Sc0000019	3782569	3783025	457	279	141	0.0	-	UAAGAACGAGACGUCCAGAAGAAGACUUUU	33	7	264	1	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3783437-3784268	Cluster_5403	Pocillopora_meandrina_HIv1___Sc0000019	3783437	3784268	832	670	217	0.013432835820895522	-	UUCGCGCGAAGAUCUAAAAAAAACAUUUGU	152	11	647	5	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3787982-3788407	Cluster_5404	Pocillopora_meandrina_HIv1___Sc0000019	3787982	3788407	426	198	80	0.025252525252525252	-	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	31	1	189	1	1	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3792172-3792891	Cluster_5405	Pocillopora_meandrina_HIv1___Sc0000019	3792172	3792891	720	103322	1481	0.00014517721298464993	-	UAGGAAUUGCCCUGGACUGCAGUAGAGGC	23572	238	102322	85	36	440	201	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3793197-3793857	Cluster_5406	Pocillopora_meandrina_HIv1___Sc0000019	3793197	3793857	661	7285	521	0.16060398078242966	-	UUGAUUUUGAUGGGAUGCUGCUGCCCUGUA	788	217	6332	40	110	311	275	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3796495-3797437	Cluster_5407	Pocillopora_meandrina_HIv1___Sc0000019	3796495	3797437	943	6497	794	0.035093119901493	-	UGCUUCAGAUUACUCGACAUGCUAGACA	433	222	5961	62	42	55	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3797742-3799350	Cluster_5408	Pocillopora_meandrina_HIv1___Sc0000019	3797742	3799350	1609	8032	1197	0.021040836653386453	-	UAUGAUCUUACAAGAACUGAACUGUGUA	771	24	7866	12	21	37	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3802608-3803032	Cluster_5409	Pocillopora_meandrina_HIv1___Sc0000019	3802608	3803032	425	141	51	0.0	-	UGAUGUUAUACUGUGAAAUCUCGUACCCA	16	1	137	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3804226-3805530	Cluster_5410	Pocillopora_meandrina_HIv1___Sc0000019	3804226	3805530	1305	12204	1388	0.06907571288102261	-	UAUAAUCUGACCACGUCUCUGACUGGGC	1569	310	11085	77	69	275	388	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3809982-3810411	Cluster_5411	Pocillopora_meandrina_HIv1___Sc0000019	3809982	3810411	430	377	73	0.021220159151193633	-	UGAGGAACUUGAAUGGAUAACUCCGGAU	94	1	335	1	1	2	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3814287-3815766	Cluster_5412	Pocillopora_meandrina_HIv1___Sc0000019	3814287	3815766	1480	14557	2013	0.06553548121178815	-	UCCAUCUAUUGAAACAGCAACUUUGCACACU	1383	124	13318	58	190	232	635	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3816735-3817153	Cluster_5413	Pocillopora_meandrina_HIv1___Sc0000019	3816735	3817153	419	209	88	0.019138755980861243	-	AAAGAAGUACAAGUGGUAGAU	32	55	97	53	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3822005-3823273	Cluster_5414	Pocillopora_meandrina_HIv1___Sc0000019	3822005	3823273	1269	7665	1214	0.027788649706457925	-	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1482	71	7310	16	65	102	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3823324-3824688	Cluster_5415	Pocillopora_meandrina_HIv1___Sc0000019	3823324	3824688	1365	2683	974	0.003354453969437197	-	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	125	29	2602	6	8	20	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3825490-3825910	Cluster_5416	Pocillopora_meandrina_HIv1___Sc0000019	3825490	3825910	421	458	197	0.25327510917030566	.	UGAUAACUAUGGACACUGGCC	59	41	281	120	11	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3825919-3826345	Cluster_5417	Pocillopora_meandrina_HIv1___Sc0000019	3825919	3826345	427	165	64	0.6787878787878788	.	CACCAAGCUCUUGAUCUCCGUACAACA	31	3	148	2	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3828011-3828678	Cluster_5418	Pocillopora_meandrina_HIv1___Sc0000019	3828011	3828678	668	1828	352	0.002188183807439825	-	UACGGUGAAUUCGUCGACUACAACAUGGA	373	36	1762	10	6	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3829320-3830050	Cluster_5419	Pocillopora_meandrina_HIv1___Sc0000019	3829320	3830050	731	646	285	0.0046439628482972135	-	UGGUAGAAAUCCGUCUGAUACAAUCUUC	56	24	602	2	2	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3830252-3832893	Cluster_5420	Pocillopora_meandrina_HIv1___Sc0000019	3830252	3832893	2642	11083	2253	0.010195795362266535	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1193	78	10779	18	37	57	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3833269-3835567	Cluster_5421	Pocillopora_meandrina_HIv1___Sc0000019	3833269	3835567	2299	3732	1201	0.003215434083601286	-	UCGCUUGCCUUACUUUUAAGCCAUACUGU	180	144	3495	12	26	18	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3835593-3836222	Cluster_5422	Pocillopora_meandrina_HIv1___Sc0000019	3835593	3836222	630	1034	358	0.0	-	UCGGUCAGAAAUGUUGAAAUACACUUUGA	55	9	996	3	3	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3836384-3836793	Cluster_5423	Pocillopora_meandrina_HIv1___Sc0000019	3836384	3836793	410	154	87	0.0	-	UGGUAGACAAACUCAUUGACUGCGCUCUGC	22	7	136	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3836844-3838486	Cluster_5424	Pocillopora_meandrina_HIv1___Sc0000019	3836844	3838486	1643	6711	1250	0.0031291908806437194	-	UUGCAUCACUUUUAAACAAUGCUGUGGGU	521	147	6473	16	20	36	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3839036-3839953	Cluster_5425	Pocillopora_meandrina_HIv1___Sc0000019	3839036	3839953	918	2903	728	0.0010334137099552187	-	UGGAAAUGAUCCCGAUUGAACCUUACGUC	196	25	2815	13	7	25	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3840104-3841485	Cluster_5426	Pocillopora_meandrina_HIv1___Sc0000019	3840104	3841485	1382	46384	2662	0.0025655398413245946	-	UAGGAUCGAAAGUAACCAAUCAUUGAAUA	4399	625	44988	214	97	150	310	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3841533-3842366	Cluster_5427	Pocillopora_meandrina_HIv1___Sc0000019	3841533	3842366	834	33237	2154	0.003068869031501038	-	UUCGAUAUUUUGCUAGAAGUGUGAAAA	4887	463	31819	173	118	136	528	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3842842-3844850	Cluster_5428	Pocillopora_meandrina_HIv1___Sc0000019	3842842	3844850	2009	19347	1794	0.0011888148033286814	-	UUUAGGAUCGAAAGUAACCAAUCAUCGAGU	5594	804	17556	228	127	434	198	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3845355-3845877	Cluster_5429	Pocillopora_meandrina_HIv1___Sc0000019	3845355	3845877	523	1588	279	0.0069269521410579345	-	UGAUUUAUGAUUGGCUGUUAGGCUGGCUC	198	51	1447	17	39	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3846212-3847404	Cluster_5430	Pocillopora_meandrina_HIv1___Sc0000019	3846212	3847404	1193	19294	1787	0.0017622058671089458	-	UAGGAUCGAAAGUAACCAAUCAUUGAAUA	2824	341	18385	116	66	88	298	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3848216-3848702	Cluster_5431	Pocillopora_meandrina_HIv1___Sc0000019	3848216	3848702	487	489	160	0.006134969325153374	-	UACAAAGCUCUCACGAAUUCACAAACAGA	55	2	481	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3849132-3850240	Cluster_5432	Pocillopora_meandrina_HIv1___Sc0000019	3849132	3850240	1109	1342	541	0.012667660208643815	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	83	16	1289	4	9	13	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3850360-3851232	Cluster_5433	Pocillopora_meandrina_HIv1___Sc0000019	3850360	3851232	873	885	395	0.0192090395480226	-	UGCUGAAACGAUUUUGACAGGUUGUCA	49	9	839	3	10	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3851660-3852097	Cluster_5434	Pocillopora_meandrina_HIv1___Sc0000019	3851660	3852097	438	921	283	0.0010857763300760044	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	124	4	907	1	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3852504-3853375	Cluster_5435	Pocillopora_meandrina_HIv1___Sc0000019	3852504	3853375	872	6666	737	0.0006000600060006001	-	UUUAGGAUCGAAAGUAACCAAUCAUUGAAUA	955	50	6506	10	14	28	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3920176-3920890	Cluster_5436	Pocillopora_meandrina_HIv1___Sc0000019	3920176	3920890	715	364	189	0.07142857142857142	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	24	2	333	3	6	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3923035-3923564	Cluster_5437	Pocillopora_meandrina_HIv1___Sc0000019	3923035	3923564	530	607	256	0.004942339373970346	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	34	2	594	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3923685-3924114	Cluster_5438	Pocillopora_meandrina_HIv1___Sc0000019	3923685	3924114	430	668	155	0.01347305389221557	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	139	1	656	4	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3930861-3932086	Cluster_5439	Pocillopora_meandrina_HIv1___Sc0000019	3930861	3932086	1226	3930	903	0.9516539440203562	+	UGUGACGGUUGACAUCAUGAUGGCGUA	235	58	3712	8	23	46	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3932170-3932597	Cluster_5440	Pocillopora_meandrina_HIv1___Sc0000019	3932170	3932597	428	136	53	0.9117647058823529	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	58	1	124	0	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3933462-3934738	Cluster_5441	Pocillopora_meandrina_HIv1___Sc0000019	3933462	3934738	1277	1247	561	0.9165998396150762	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	80	13	1174	4	5	16	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3969906-3970333	Cluster_5442	Pocillopora_meandrina_HIv1___Sc0000019	3969906	3970333	428	207	81	0.9227053140096618	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	27	2	185	2	3	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3970686-3971284	Cluster_5443	Pocillopora_meandrina_HIv1___Sc0000019	3970686	3971284	599	1455	279	0.7951890034364261	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	448	8	1375	2	9	20	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4255204-4255620	Cluster_5444	Pocillopora_meandrina_HIv1___Sc0000019	4255204	4255620	417	873	27	0.995418098510882	+	CCCCGUGUUGUAGGCA	389	873	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4411192-4411606	Cluster_5445	Pocillopora_meandrina_HIv1___Sc0000019	4411192	4411606	415	247	16	0.008097165991902834	-	CUUUCCGAGGUCGGG	123	246	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4422719-4423146	Cluster_5446	Pocillopora_meandrina_HIv1___Sc0000019	4422719	4423146	428	113	8	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	71	0	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4618105-4618521	Cluster_5447	Pocillopora_meandrina_HIv1___Sc0000019	4618105	4618521	417	118	8	0.0	-	CAGCUGUGACCCUCGCA	90	118	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4626626-4627050	Cluster_5448	Pocillopora_meandrina_HIv1___Sc0000019	4626626	4627050	425	138	19	0.9927536231884058	+	UGGUCUGAAGAAAAAAAAAAAAAA	34	4	81	2	7	9	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4697499-4697931	Cluster_5449	Pocillopora_meandrina_HIv1___Sc0000019	4697499	4697931	433	407	80	0.02457002457002457	-	UCGAUUCCGCGAUGACUACAAUACGUUCUGU	109	2	404	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4747093-4747592	Cluster_5450	Pocillopora_meandrina_HIv1___Sc0000019	4747093	4747592	500	1180	287	0.42966101694915254	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	242	85	743	19	38	133	162	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4988931-4989354	Cluster_5451	Pocillopora_meandrina_HIv1___Sc0000019	4988931	4989354	424	155	75	0.7419354838709677	.	AACACUACUACCGUGAGACUGAAG	26	5	84	3	8	9	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5181281-5181698	Cluster_5452	Pocillopora_meandrina_HIv1___Sc0000019	5181281	5181698	418	86	5	0.9767441860465116	+	UUGAACUCGACCCUGUCG	79	84	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5259204-5259623	Cluster_5453	Pocillopora_meandrina_HIv1___Sc0000019	5259204	5259623	420	248	170	0.9838709677419355	+	GACGGAAUUGCUAGUGUUAAACACGAAAU	13	59	121	14	25	20	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5416500-5416927	Cluster_5454	Pocillopora_meandrina_HIv1___Sc0000019	5416500	5416927	428	189	73	0.005291005291005291	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	26	2	182	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5426462-5426883	Cluster_5455	Pocillopora_meandrina_HIv1___Sc0000019	5426462	5426883	422	77	12	0.012987012987012988	-	UGAACUACUGCUCGUACUCUAGAUAUA	61	2	73	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5428082-5428745	Cluster_5456	Pocillopora_meandrina_HIv1___Sc0000019	5428082	5428745	664	470	214	0.21063829787234042	.	UGCACUUGAAUCUUCCAAAAUAAUUGUUGA	30	14	424	5	8	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5430017-5430794	Cluster_5457	Pocillopora_meandrina_HIv1___Sc0000019	5430017	5430794	778	943	202	0.35737009544008486	.	UUCUACCCAUCAACUGUGCGAUUUCAAGA	108	30	880	9	10	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5434354-5434782	Cluster_5458	Pocillopora_meandrina_HIv1___Sc0000019	5434354	5434782	429	118	33	0.03389830508474576	-	UCCGUGAUUCAGAUUAAAAAUUCAGAUGAAU	21	0	112	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5435342-5435770	Cluster_5459	Pocillopora_meandrina_HIv1___Sc0000019	5435342	5435770	429	143	56	0.006993006993006993	-	UGUUCAAUACGUGGGCUGUCUUAUUCAAGC	39	2	138	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5443101-5443583	Cluster_5460	Pocillopora_meandrina_HIv1___Sc0000019	5443101	5443583	483	286	92	0.0034965034965034965	-	UAGGGAUAAUCGGUCUUCUAAUGUACUGGA	37	71	211	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5444458-5444886	Cluster_5461	Pocillopora_meandrina_HIv1___Sc0000019	5444458	5444886	429	306	51	0.0	-	UAUAGAACUCUUUAGGUUGUGAGAUGGAG	105	7	215	80	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5446708-5447270	Cluster_5462	Pocillopora_meandrina_HIv1___Sc0000019	5446708	5447270	563	793	234	0.0012610340479192938	-	UCUUGCUUUGGCUGAGACGAGAGACUGUGU	58	5	773	3	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5447713-5448138	Cluster_5463	Pocillopora_meandrina_HIv1___Sc0000019	5447713	5448138	426	144	77	0.0	-	UGAGUAGAUCACUCUGGGACGUCCUCGCC	15	5	130	4	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5448830-5449258	Cluster_5464	Pocillopora_meandrina_HIv1___Sc0000019	5448830	5449258	429	317	86	0.0	-	UGUAAAGAGCUACUCUGGAAACUUGAAGC	76	4	312	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5458238-5458661	Cluster_5465	Pocillopora_meandrina_HIv1___Sc0000019	5458238	5458661	424	122	60	0.01639344262295082	-	UGAUCUGAUCUUGGCGACAUUAUCCUC	21	5	114	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5460529-5460955	Cluster_5466	Pocillopora_meandrina_HIv1___Sc0000019	5460529	5460955	427	108	34	0.009259259259259259	-	UCCGACUGGGUCUCUCUGUAUUUGAGAAGC	19	2	103	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5467821-5468262	Cluster_5467	Pocillopora_meandrina_HIv1___Sc0000019	5467821	5468262	442	267	66	0.3595505617977528	.	AUCCCUUUUAGUAACCUUAUUGAA	78	20	130	6	5	16	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5468366-5469115	Cluster_5468	Pocillopora_meandrina_HIv1___Sc0000019	5468366	5469115	750	2627	475	0.0197944423296536	-	UCGUUUCUCAUCUACCUUGUGUUCUUG	184	38	2498	2	33	24	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5474494-5474915	Cluster_5469	Pocillopora_meandrina_HIv1___Sc0000019	5474494	5474915	422	119	46	0.0	-	UGAGUGUAUUCUUGAACUGUUUUCCAAC	43	0	117	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5477906-5478336	Cluster_5470	Pocillopora_meandrina_HIv1___Sc0000019	5477906	5478336	431	192	67	0.0	-	UUCAAUGUGAAAUAGUUUAUUGAGGAAUGGU	51	0	190	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5478779-5479182	Cluster_5471	Pocillopora_meandrina_HIv1___Sc0000019	5478779	5479182	404	215	98	0.004651162790697674	-	UGUUUACAGAGGUUUGGGUUGAUGAUCUU	17	2	206	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5482081-5482491	Cluster_5472	Pocillopora_meandrina_HIv1___Sc0000019	5482081	5482491	411	200	113	0.04	-	UGACAUGACUGUACCGUACAGAACACCA	9	7	186	0	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5482975-5483420	Cluster_5473	Pocillopora_meandrina_HIv1___Sc0000019	5482975	5483420	446	851	171	0.01410105757931845	-	UAACUCUGAUUGCUUAAUCCCUCACUGAGG	155	12	819	2	7	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5483634-5485029	Cluster_5474	Pocillopora_meandrina_HIv1___Sc0000019	5483634	5485029	1396	4467	1287	0.15312290127602418	-	AUCCCACUUCUGACACCA	152	429	3691	24	60	130	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5485607-5486184	Cluster_5475	Pocillopora_meandrina_HIv1___Sc0000019	5485607	5486184	578	446	185	0.02466367713004484	-	UAUCACACUUGUGCUGCCAUGCUGGACA	52	3	424	0	1	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5486851-5489306	Cluster_5476	Pocillopora_meandrina_HIv1___Sc0000019	5486851	5489306	2456	12039	2974	0.04161475205581859	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	460	151	11066	64	93	176	489	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5489974-5490821	Cluster_5477	Pocillopora_meandrina_HIv1___Sc0000019	5489974	5490821	848	894	412	0.20134228187919462	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	110	15	783	12	21	16	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5490882-5491827	Cluster_5478	Pocillopora_meandrina_HIv1___Sc0000019	5490882	5491827	946	794	309	0.08564231738035265	-	UAUUCCAAUCUCCUCUGAAACUCUUCCGGA	77	8	729	4	3	22	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5493357-5493791	Cluster_5479	Pocillopora_meandrina_HIv1___Sc0000019	5493357	5493791	435	453	172	0.026490066225165563	-	UCUGUUCUGACUUGAUAGGACCUUAUGUC	47	10	430	3	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5494121-5494552	Cluster_5480	Pocillopora_meandrina_HIv1___Sc0000019	5494121	5494552	432	870	271	0.4114942528735632	.	ACCCAGUUGAAGAACGAGAGACGU	104	11	544	5	17	71	222	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5495048-5495690	Cluster_5481	Pocillopora_meandrina_HIv1___Sc0000019	5495048	5495690	643	2294	454	0.02746294681778553	-	UGUUCCUUGAAUUCUGCGUGCACAAAGC	344	32	2168	13	15	17	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5495835-5498398	Cluster_5482	Pocillopora_meandrina_HIv1___Sc0000019	5495835	5498398	2564	6263	1895	0.07568258023311512	-	UGUUUGCAGUUAUGAAUGAAUCUCUUUAGC	489	144	5778	47	41	88	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5498925-5499650	Cluster_5483	Pocillopora_meandrina_HIv1___Sc0000019	5498925	5499650	726	2361	374	0.016518424396442185	-	UGACAAAUUUUCAUGGCUCCUUUCACAGA	467	77	2179	13	20	19	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5500882-5501311	Cluster_5484	Pocillopora_meandrina_HIv1___Sc0000019	5500882	5501311	430	278	82	0.04316546762589928	-	UGGUCUUGAAAUAUGGUGACACCCAAUCUG	66	14	253	3	3	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5511087-5512628	Cluster_5485	Pocillopora_meandrina_HIv1___Sc0000019	5511087	5512628	1542	1514	331	0.11955085865257596	-	UGGGUAAACAGACUUUGCACUUUGUAUGC	303	31	1410	16	12	13	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5515544-5516386	Cluster_5486	Pocillopora_meandrina_HIv1___Sc0000019	5515544	5516386	843	4585	556	0.007633587786259542	-	UGAACUGUUGAACCACAAGUGAAGAUAC	411	171	4226	26	115	30	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5518101-5518533	Cluster_5487	Pocillopora_meandrina_HIv1___Sc0000019	5518101	5518533	433	295	120	0.01694915254237288	-	UCACAUGUAAACACCUUGCCAUUAUCGAUC	61	8	275	1	6	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5519625-5520293	Cluster_5488	Pocillopora_meandrina_HIv1___Sc0000019	5519625	5520293	669	759	175	0.026350461133069828	-	UCGACGUCGAUAUCAACAUUCUUAAUGU	234	8	742	3	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5528722-5529214	Cluster_5489	Pocillopora_meandrina_HIv1___Sc0000019	5528722	5529214	493	217	78	0.004608294930875576	-	UGGGCGAUUUGCAAUUCAUGGAAAAAUGU	43	8	206	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5530161-5530594	Cluster_5490	Pocillopora_meandrina_HIv1___Sc0000019	5530161	5530594	434	224	74	0.33035714285714285	.	AAGCUCUUUAAGAUCAUUGAACA	39	4	159	0	6	44	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5531747-5532717	Cluster_5491	Pocillopora_meandrina_HIv1___Sc0000019	5531747	5532717	971	852	188	0.002347417840375587	-	UGAGCAAUGAAUUCUUCAAACACAAAACAGA	194	23	813	2	5	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5537339-5538414	Cluster_5492	Pocillopora_meandrina_HIv1___Sc0000019	5537339	5538414	1076	699	312	0.11874105865522175	-	UCGGCUUUGAUUCCUGGCAGCUUAUCAA	73	29	615	4	3	8	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5538438-5538865	Cluster_5493	Pocillopora_meandrina_HIv1___Sc0000019	5538438	5538865	428	324	125	0.08641975308641975	-	UACUUUGACAAGAACUAUAGGAUGGCAA	54	14	291	2	5	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5538984-5539389	Cluster_5494	Pocillopora_meandrina_HIv1___Sc0000019	5538984	5539389	406	163	82	0.15950920245398773	-	UCCAUUCUAUACAGCUCUUCACAAUCGUU	16	8	131	0	1	2	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5540324-5540983	Cluster_5495	Pocillopora_meandrina_HIv1___Sc0000019	5540324	5540983	660	510	132	0.08627450980392157	-	UCUUGUACGUUGCUUAGAAGAUUCAC	142	40	418	2	2	28	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5541815-5542236	Cluster_5496	Pocillopora_meandrina_HIv1___Sc0000019	5541815	5542236	422	136	55	0.0	-	UAAAACGAUAUUGCUGACAGAAAAAUAACA	33	1	135	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5543717-5544953	Cluster_5497	Pocillopora_meandrina_HIv1___Sc0000019	5543717	5544953	1237	983	316	0.024415055951169887	-	UGAACGACUCAAAAUCUCCACUGUUGAAAGG	150	8	946	4	8	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5546262-5547320	Cluster_5498	Pocillopora_meandrina_HIv1___Sc0000019	5546262	5547320	1059	2021	716	0.10836219693221177	-	UACGCUGAAAUUUCUGCUUGGGU	117	96	1580	35	28	198	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5548045-5548473	Cluster_5499	Pocillopora_meandrina_HIv1___Sc0000019	5548045	5548473	429	123	51	0.0	-	UUGGUCUUCCUGUAAUGUGCUGAUUGUGGC	19	1	121	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5549965-5550394	Cluster_5500	Pocillopora_meandrina_HIv1___Sc0000019	5549965	5550394	430	179	46	0.0	-	UGGUUUCUGAAAUUUUGAAUGUGGAAGUUC	62	4	165	2	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5554945-5555364	Cluster_5501	Pocillopora_meandrina_HIv1___Sc0000019	5554945	5555364	420	543	92	0.0	-	AAAUCUUACACUCUUUGCCA	142	377	163	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5555767-5556170	Cluster_5502	Pocillopora_meandrina_HIv1___Sc0000019	5555767	5556170	404	187	84	0.0	-	UGAGUCCUCGUUUUAGCAGCAUGUACUGUU	24	4	176	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5556470-5556917	Cluster_5503	Pocillopora_meandrina_HIv1___Sc0000019	5556470	5556917	448	650	237	0.003076923076923077	-	UGUCCAGGUCUAGUUGUUCUCCUUCGAUU	67	12	621	3	4	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5558976-5559395	Cluster_5504	Pocillopora_meandrina_HIv1___Sc0000019	5558976	5559395	420	192	103	0.11458333333333333	-	UUCUAAAGCUAGAGAACUGACUCAACUUC	14	13	153	3	1	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5562928-5564415	Cluster_5505	Pocillopora_meandrina_HIv1___Sc0000019	5562928	5564415	1488	4020	1347	0.10820895522388059	-	UAGCGGUAUUUUCUUCAAUAGUAAGGU	147	77	3519	21	35	171	197	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5564431-5565476	Cluster_5506	Pocillopora_meandrina_HIv1___Sc0000019	5564431	5565476	1046	2560	776	0.059765625	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	269	61	2387	12	30	25	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5565543-5565953	Cluster_5507	Pocillopora_meandrina_HIv1___Sc0000019	5565543	5565953	411	124	69	0.03225806451612903	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	13	5	107	3	5	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5608758-5609173	Cluster_5508	Pocillopora_meandrina_HIv1___Sc0000019	5608758	5609173	416	123	13	0.9512195121951219	+	UCCGGACUGUUACAGU	56	122	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5960842-5961269	Cluster_5509	Pocillopora_meandrina_HIv1___Sc0000019	5960842	5961269	428	170	92	0.058823529411764705	-	UCUGACUUGUAGACUUUGGUGAACUGCA	29	1	164	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6018847-6019274	Cluster_5510	Pocillopora_meandrina_HIv1___Sc0000019	6018847	6019274	428	172	96	0.0872093023255814	-	UCUGACUUGUAGACUUUGGUGAACUGCA	25	0	163	0	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6044310-6045174	Cluster_5511	Pocillopora_meandrina_HIv1___Sc0000019	6044310	6045174	865	536	254	0.9160447761194029	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	25	9	513	0	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6067663-6068286	Cluster_5512	Pocillopora_meandrina_HIv1___Sc0000019	6067663	6068286	624	459	164	0.030501089324618737	-	UCUGACUUGUAGACUUUGGUGAACUGCA	70	1	451	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6195085-6195499	Cluster_5513	Pocillopora_meandrina_HIv1___Sc0000019	6195085	6195499	415	96	9	0.0	-	AAGAAGAUUCGGGCU	44	95	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6301471-6302094	Cluster_5514	Pocillopora_meandrina_HIv1___Sc0000019	6301471	6302094	624	1712	245	0.008761682242990653	-	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	495	3	1694	1	0	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6393114-6393566	Cluster_5515	Pocillopora_meandrina_HIv1___Sc0000019	6393114	6393566	453	235	94	0.9787234042553191	+	UGAACACGCGUACUUGUAAUUAUGAAAUGGA	20	4	225	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6393721-6396888	Cluster_5516	Pocillopora_meandrina_HIv1___Sc0000019	6393721	6396888	3168	5146	1762	0.9249902837155072	+	UGUACAACCAUCCGAUACUCUUGU	674	52	3783	27	31	132	1121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6397087-6398342	Cluster_5517	Pocillopora_meandrina_HIv1___Sc0000019	6397087	6398342	1256	1671	688	0.8138839018551766	+	CUUUCCGAGGUCGCGA	94	182	1394	13	18	21	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6398638-6399065	Cluster_5518	Pocillopora_meandrina_HIv1___Sc0000019	6398638	6399065	428	333	181	0.8258258258258259	+	UGUUGUUCCAGGUAGUAUAAGCAAUCUG	11	9	300	2	2	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6399204-6400375	Cluster_5519	Pocillopora_meandrina_HIv1___Sc0000019	6399204	6400375	1172	8149	1181	0.8820714198061111	+	UACAAUAACCUCUGAUUUCACUAAAUG	1118	66	7403	40	78	203	359	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6411186-6411623	Cluster_5520	Pocillopora_meandrina_HIv1___Sc0000019	6411186	6411623	438	526	137	0.019011406844106463	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	132	5	515	2	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6423928-6424355	Cluster_5521	Pocillopora_meandrina_HIv1___Sc0000019	6423928	6424355	428	76	18	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	26	0	75	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6434236-6434650	Cluster_5522	Pocillopora_meandrina_HIv1___Sc0000019	6434236	6434650	415	159	96	0.9685534591194969	+	UGUAUUACUGGGCUGCCUAUCUUCAUUGGA	14	4	151	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6437833-6439058	Cluster_5523	Pocillopora_meandrina_HIv1___Sc0000019	6437833	6439058	1226	7459	1403	0.06917817401796487	-	UGUUUUGUUUCUGAUUAACCUUGUGU	592	143	6943	36	40	101	196	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6439915-6441043	Cluster_5524	Pocillopora_meandrina_HIv1___Sc0000019	6439915	6441043	1129	5169	810	0.9686593151479976	+	UGCUUGUAAUGUAAUAUCUCCUGGAGG	520	23	4877	23	28	103	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6441090-6441643	Cluster_5525	Pocillopora_meandrina_HIv1___Sc0000019	6441090	6441643	554	2865	388	0.987434554973822	+	UAUAUCCUUUUAUUAAGGGUUUGGCGGUAG	771	20	2803	1	4	12	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6446818-6447245	Cluster_5526	Pocillopora_meandrina_HIv1___Sc0000019	6446818	6447245	428	173	50	0.046242774566473986	-	UCAAAUCGAUUCUGAAUGUUCUCUUUUA	48	0	170	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6457181-6458234	Cluster_5527	Pocillopora_meandrina_HIv1___Sc0000019	6457181	6458234	1054	1231	350	0.9082047116165719	+	UCAUCUCUAUUAUUGGGUCGCUUGUAGU	212	7	1184	7	7	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6462929-6463921	Cluster_5528	Pocillopora_meandrina_HIv1___Sc0000019	6462929	6463921	993	7139	966	0.9599383667180277	+	UGUUCAACUCUUUCAAUGGCAGCUGUG	647	134	6723	31	50	84	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6469159-6469574	Cluster_5529	Pocillopora_meandrina_HIv1___Sc0000019	6469159	6469574	416	217	6	0.9907834101382489	+	GACACUGGCUUCGGUU	207	217	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6490502-6491050	Cluster_5530	Pocillopora_meandrina_HIv1___Sc0000019	6490502	6491050	549	1793	237	0.013385387618516454	-	UGUUCAAAAUUAUCGUCUACGUAUGUGU	134	7	1700	4	13	3	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6653731-6654781	Cluster_5531	Pocillopora_meandrina_HIv1___Sc0000019	6653731	6654781	1051	707	357	0.768033946251768	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	24	14	652	4	2	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6655040-6655470	Cluster_5532	Pocillopora_meandrina_HIv1___Sc0000019	6655040	6655470	431	630	209	0.919047619047619	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	90	9	535	4	2	11	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6679737-6680609	Cluster_5533	Pocillopora_meandrina_HIv1___Sc0000019	6679737	6680609	873	540	263	0.9037037037037037	+	UACUGAUAGUGAAACUGCUCCUUGAACC	19	2	515	2	3	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:130515-130932	Cluster_5534	Pocillopora_meandrina_HIv1___Sc0000020	130515	130932	418	205	41	0.0	-	GCUGGCUGACUUUGGUGG	31	204	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:312674-314365	Cluster_5535	Pocillopora_meandrina_HIv1___Sc0000020	312674	314365	1692	4169	1336	0.10362197169585033	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	333	55	3880	25	25	58	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:314372-315343	Cluster_5536	Pocillopora_meandrina_HIv1___Sc0000020	314372	315343	972	608	299	0.1299342105263158	-	UUGUCGUGAUCUUUCACUGCUUCUUGC	54	12	554	7	5	10	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:315359-315790	Cluster_5537	Pocillopora_meandrina_HIv1___Sc0000020	315359	315790	432	513	210	0.04483430799220273	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	59	6	489	1	0	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:316076-317295	Cluster_5538	Pocillopora_meandrina_HIv1___Sc0000020	316076	317295	1220	1274	480	0.0565149136577708	-	UAAGUGCGCUCUCAUGUAGAUAUAUGGG	91	18	1164	2	20	21	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:324384-324812	Cluster_5539	Pocillopora_meandrina_HIv1___Sc0000020	324384	324812	429	172	65	0.03488372093023256	-	UGUAUUCUUUUAUAACUCUUAGGUUGUGAC	30	4	164	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:336430-336854	Cluster_5540	Pocillopora_meandrina_HIv1___Sc0000020	336430	336854	425	145	77	0.013793103448275862	-	UGACGUGAAAGUUUCUGGACUUGUUUCGA	13	2	138	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:338038-338466	Cluster_5541	Pocillopora_meandrina_HIv1___Sc0000020	338038	338466	429	292	147	0.11986301369863013	-	UCGGAACAACGGUCGGUCUUCAGGCU	16	14	247	0	1	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:341599-342016	Cluster_5542	Pocillopora_meandrina_HIv1___Sc0000020	341599	342016	418	99	55	0.0	-	UGACGAUUUUCGCGGCUCGAUUUUGU	12	3	96	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:347036-347464	Cluster_5543	Pocillopora_meandrina_HIv1___Sc0000020	347036	347464	429	319	172	0.2601880877742947	.	UGUGAUUUCUUUGUCUGGCGAAUUUCUCC	32	11	290	3	3	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:351542-351968	Cluster_5544	Pocillopora_meandrina_HIv1___Sc0000020	351542	351968	427	218	113	0.0045871559633027525	-	UUAGAUCGUUCAUGGUUGCAUUCGUGA	27	3	212	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:361845-362341	Cluster_5545	Pocillopora_meandrina_HIv1___Sc0000020	361845	362341	497	1130	202	0.01592920353982301	-	UGAAACUGUUGCAUUUGAUUCUGUUGCUGC	297	3	1117	0	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:380637-381078	Cluster_5546	Pocillopora_meandrina_HIv1___Sc0000020	380637	381078	442	899	145	0.1935483870967742	-	UGAACUUGAACUAUUUGCUGGAGACGA	230	8	722	51	14	11	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:382358-382785	Cluster_5547	Pocillopora_meandrina_HIv1___Sc0000020	382358	382785	428	191	77	0.010471204188481676	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	22	5	179	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:395351-395774	Cluster_5548	Pocillopora_meandrina_HIv1___Sc0000020	395351	395774	424	153	57	0.6339869281045751	.	UUGUCUUGUCAAACAGACCCUGGAGAUA	14	2	123	0	2	1	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:775334-775783	Cluster_5549	Pocillopora_meandrina_HIv1___Sc0000020	775334	775783	450	604	258	0.0695364238410596	-	UUACCGGAGUGUUCUCUCGACGCAGUUUC	36	3	563	0	4	22	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:775949-776378	Cluster_5550	Pocillopora_meandrina_HIv1___Sc0000020	775949	776378	430	343	108	0.011661807580174927	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	41	1	338	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:857382-857811	Cluster_5551	Pocillopora_meandrina_HIv1___Sc0000020	857382	857811	430	311	50	0.003215434083601286	-	ACAAAGAACGAAUUGAGCCGACUUCAUGAU	74	4	298	3	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:859609-860032	Cluster_5552	Pocillopora_meandrina_HIv1___Sc0000020	859609	860032	424	91	31	0.0	-	UGGUAGAGCCAGUGAGGAAGCAGCUAAAG	18	11	71	3	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:869363-870043	Cluster_5553	Pocillopora_meandrina_HIv1___Sc0000020	869363	870043	681	1423	174	0.04848910751932537	-	UUCUGCUAUAUUGUGAAAUAACCUCAACAU	284	35	1340	5	13	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:929870-930286	Cluster_5554	Pocillopora_meandrina_HIv1___Sc0000020	929870	930286	417	824	35	0.0	-	UGACAACUUUUGACG	379	822	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1057769-1058237	Cluster_5555	Pocillopora_meandrina_HIv1___Sc0000020	1057769	1058237	469	467	191	0.18201284796573874	-	UUCCUCAUCUGAAGACUCUUCUAGAAUC	33	17	429	5	12	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1058725-1059940	Cluster_5556	Pocillopora_meandrina_HIv1___Sc0000020	1058725	1059940	1216	10559	1529	0.04100767118098305	-	UGAAUCACUGUCAUCAAAACCAUGAAC	1198	139	9979	48	90	109	194	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1061581-1062328	Cluster_5557	Pocillopora_meandrina_HIv1___Sc0000020	1061581	1062328	748	6451	701	0.28026662532940627	.	UAAGAAGAGGAAAAUUUACAUGUUUGA	704	62	5816	20	15	440	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1142046-1142570	Cluster_5558	Pocillopora_meandrina_HIv1___Sc0000020	1142046	1142570	525	378	82	0.8677248677248677	+	UGACUUGAUUUUUUACGGCAUUUUGUAUC	177	3	352	3	6	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1162644-1163072	Cluster_5559	Pocillopora_meandrina_HIv1___Sc0000020	1162644	1163072	429	169	49	1.0	+	UGUGCCAAAGAUUUAGAACGAAAGAACGA	36	0	167	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1409826-1410256	Cluster_5560	Pocillopora_meandrina_HIv1___Sc0000020	1409826	1410256	431	248	64	0.012096774193548387	-	UGUGUGACUUUGUAUGUAUAUUGAGCGU	43	0	245	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1424547-1424962	Cluster_5561	Pocillopora_meandrina_HIv1___Sc0000020	1424547	1424962	416	79	26	0.9746835443037974	+	AGUUGGAAGAAAAUCAAGAGCCCGUG	17	8	63	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1425149-1425562	Cluster_5562	Pocillopora_meandrina_HIv1___Sc0000020	1425149	1425562	414	78	31	0.9871794871794872	+	UGCCAAGCGAUGGAAAGGGAGGAAGAGA	26	5	61	1	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1482548-1482962	Cluster_5563	Pocillopora_meandrina_HIv1___Sc0000020	1482548	1482962	415	122	11	0.00819672131147541	-	ACGGAGAACUCUUUU	84	119	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1665286-1665721	Cluster_5564	Pocillopora_meandrina_HIv1___Sc0000020	1665286	1665721	436	627	134	0.9617224880382775	+	UGCGAUUUCGUUCCUCGUCCUUGAUGAGG	149	2	600	0	3	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1806706-1807113	Cluster_5565	Pocillopora_meandrina_HIv1___Sc0000020	1806706	1807113	408	103	48	0.02912621359223301	-	UUUGACAACUUUUGACGA	37	74	11	5	6	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2018665-2019081	Cluster_5566	Pocillopora_meandrina_HIv1___Sc0000020	2018665	2019081	417	127	81	0.007874015748031496	-	GGAAGAACGAAAGCGUUAGACCUGACU	12	34	71	3	5	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2071022-2071437	Cluster_5567	Pocillopora_meandrina_HIv1___Sc0000020	2071022	2071437	416	340	9	0.0029411764705882353	-	GUUCUAUUUUGUUUGU	306	340	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2137330-2138632	Cluster_5568	Pocillopora_meandrina_HIv1___Sc0000020	2137330	2138632	1303	15208	2466	0.09836927932667017	-	UCGAAUGCAUAAGUUUACUGGGGCUUGACC	1958	145	14426	43	66	224	304	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2139970-2140397	Cluster_5569	Pocillopora_meandrina_HIv1___Sc0000020	2139970	2140397	428	653	110	0.9280245022970903	+	UGUAUCUAGCUCUCUCUGAACCACAGG	178	7	595	1	2	1	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2140982-2141636	Cluster_5570	Pocillopora_meandrina_HIv1___Sc0000020	2140982	2141636	655	3124	472	0.05825864276568502	-	UACGAUGUGAUGUCUGAUCUUGACCCCGAU	572	18	2929	4	19	61	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2154149-2157219	Cluster_5571	Pocillopora_meandrina_HIv1___Sc0000020	2154149	2157219	3071	6515	2242	0.016423637759017652	-	UGAGACUUAAUUUCACACUACAGGAAUUGU	211	129	6158	32	35	78	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2157971-2158803	Cluster_5572	Pocillopora_meandrina_HIv1___Sc0000020	2157971	2158803	833	949	411	0.007376185458377239	-	UGAUUAAGAUAAGUUCUCUCAUUGGGCAUU	30	43	863	11	12	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2159004-2159497	Cluster_5573	Pocillopora_meandrina_HIv1___Sc0000020	2159004	2159497	494	346	134	0.005780346820809248	-	UAAAGCUGUGUCCACUAUAUCUGAGUAUU	27	5	331	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2162622-2163356	Cluster_5574	Pocillopora_meandrina_HIv1___Sc0000020	2162622	2163356	735	4268	271	0.011012183692596064	-	UGUUCCGUUAAUGACAUAAACCUUAGUCCUU	801	43	4130	6	3	10	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2165991-2166419	Cluster_5575	Pocillopora_meandrina_HIv1___Sc0000020	2165991	2166419	429	284	105	0.0035211267605633804	-	UAAUCUUGUCUUCACUGAACUCUAGGCA	56	7	271	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2167227-2167640	Cluster_5576	Pocillopora_meandrina_HIv1___Sc0000020	2167227	2167640	414	206	100	0.009708737864077669	-	UGUAAACUUCCGCAUCAGCUGUAUUUCAAC	25	9	192	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2167723-2168861	Cluster_5577	Pocillopora_meandrina_HIv1___Sc0000020	2167723	2168861	1139	729	222	0.015089163237311385	-	UGAGAUCUUUAACAUUGCUGAGAUGAUAU	123	22	693	1	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2171482-2173323	Cluster_5578	Pocillopora_meandrina_HIv1___Sc0000020	2171482	2173323	1842	9919	1745	0.14688980744026617	-	UACUUGUCGAAGUCCUGGCCCUCUAGCC	686	113	9058	39	138	190	381	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2180252-2180666	Cluster_5579	Pocillopora_meandrina_HIv1___Sc0000020	2180252	2180666	415	233	131	0.02145922746781116	-	UGAAACGCAUCGUCACAUUGUAUAACUGA	14	19	212	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2183526-2183955	Cluster_5580	Pocillopora_meandrina_HIv1___Sc0000020	2183526	2183955	430	182	77	0.005494505494505495	-	UCCGAUCAAAGAAACAUCAAAGUGCUCGC	19	2	175	4	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2184160-2185184	Cluster_5581	Pocillopora_meandrina_HIv1___Sc0000020	2184160	2185184	1025	1630	851	0.011042944785276074	-	GGGAGCCUGAGAAACGU	55	912	367	118	87	87	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2187009-2187437	Cluster_5582	Pocillopora_meandrina_HIv1___Sc0000020	2187009	2187437	429	270	107	0.014814814814814815	-	UGUUGCUCUAAAUGUAUCUUUGAUGUAUA	41	4	262	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2187594-2188625	Cluster_5583	Pocillopora_meandrina_HIv1___Sc0000020	2187594	2188625	1032	1200	285	0.0075	-	UGUUAGAAAUUCCAGAAACUGCUUGUGUGC	271	11	1169	2	2	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2193899-2194735	Cluster_5584	Pocillopora_meandrina_HIv1___Sc0000020	2193899	2194735	837	8629	1705	0.004287866496697184	-	CUUAGAUGUUCUGGGCCGCACGCGCGCUA	281	3576	3417	431	362	391	452	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2196742-2197517	Cluster_5585	Pocillopora_meandrina_HIv1___Sc0000020	2196742	2197517	776	591	348	0.01015228426395939	-	UAGGAUCUGAUUUCAAUCCAUUUGCUGUC	28	13	552	5	5	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2197561-2199013	Cluster_5586	Pocillopora_meandrina_HIv1___Sc0000020	2197561	2199013	1453	4279	1061	0.010516475812105632	-	UACAAAGUCAUGUGCCACCUCUGCAACA	446	66	4124	8	7	29	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2199973-2200508	Cluster_5587	Pocillopora_meandrina_HIv1___Sc0000020	2199973	2200508	536	513	225	0.001949317738791423	-	UCUUUUAGUAUCGCCAACUGUGGCUUCGGA	38	6	493	6	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2200810-2201288	Cluster_5588	Pocillopora_meandrina_HIv1___Sc0000020	2200810	2201288	479	1028	275	0.0019455252918287938	-	UGUUGUCAUAUUGUUUCUCCAUUCAUC	129	6	977	2	3	25	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2202506-2202922	Cluster_5589	Pocillopora_meandrina_HIv1___Sc0000020	2202506	2202922	417	136	74	0.029411764705882353	-	UGCACUGUAUCGAUACCACUUAUAGGGAAA	23	5	127	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2203171-2204060	Cluster_5590	Pocillopora_meandrina_HIv1___Sc0000020	2203171	2204060	890	809	331	0.004944375772558714	-	UGAUAUUAUACAGAUCUUCUGCCUGCAUAGC	95	29	756	11	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2204387-2206467	Cluster_5591	Pocillopora_meandrina_HIv1___Sc0000020	2204387	2206467	2081	16104	1980	0.05141579731743666	-	UCGGUAUAGCUUUCAAAACUGUUGUCACU	2293	497	13953	74	155	775	650	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2206824-2207412	Cluster_5592	Pocillopora_meandrina_HIv1___Sc0000020	2206824	2207412	589	1417	371	0.06986591390261115	-	UAAACAACGCUCUGAUCGCCAUUAGGUU	101	9	1322	7	10	44	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2207421-2208625	Cluster_5593	Pocillopora_meandrina_HIv1___Sc0000020	2207421	2208625	1205	1461	645	0.11704312114989733	-	UCGUCCGUCAGUUUGUUCCACUUUAAAC	85	33	1324	8	22	35	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2208662-2209312	Cluster_5594	Pocillopora_meandrina_HIv1___Sc0000020	2208662	2209312	651	1275	505	0.10823529411764705	-	UGCUUCUCAAUUUCGUCUGUUGUCAGGG	94	24	1160	10	7	28	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2210292-2210722	Cluster_5595	Pocillopora_meandrina_HIv1___Sc0000020	2210292	2210722	431	449	96	0.05790645879732739	-	UCUAUGCUAUUAUUCUGUUUCCGACACACU	100	1	444	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2213520-2214628	Cluster_5596	Pocillopora_meandrina_HIv1___Sc0000020	2213520	2214628	1109	1364	409	0.01466275659824047	-	UGACAAUCAUGCUGCUAAGUUCCUACGC	132	45	1291	2	7	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2215351-2215781	Cluster_5597	Pocillopora_meandrina_HIv1___Sc0000020	2215351	2215781	431	522	168	0.0019157088122605363	-	UAAUUUUGGAUGUGAGCUUCCCGAUAGCC	51	8	503	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2215844-2216273	Cluster_5598	Pocillopora_meandrina_HIv1___Sc0000020	2215844	2216273	430	325	139	0.0	-	UUGUGUCACUAACAAGGGACCUAGAAGAGU	47	6	316	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2218100-2218724	Cluster_5599	Pocillopora_meandrina_HIv1___Sc0000020	2218100	2218724	625	258	85	0.3953488372093023	.	UGUAUCCCAACCAAGC	52	102	155	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2219677-2220083	Cluster_5600	Pocillopora_meandrina_HIv1___Sc0000020	2219677	2220083	407	86	32	0.011627906976744186	-	UGACUUAACUGAACUUUCACCUGCAGUGGA	41	0	81	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2222506-2223394	Cluster_5601	Pocillopora_meandrina_HIv1___Sc0000020	2222506	2223394	889	3760	588	0.26835106382978724	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	750	93	3148	45	26	108	340	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2223405-2224021	Cluster_5602	Pocillopora_meandrina_HIv1___Sc0000020	2223405	2224021	617	2448	376	0.12826797385620914	-	UUACAUGAUUUUUAUAGGAGCUGAAUAA	791	25	2295	4	5	24	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2247886-2248412	Cluster_5603	Pocillopora_meandrina_HIv1___Sc0000020	2247886	2248412	527	893	208	0.4568868980963046	.	UGGGUUCUCGAUCACGUCUAAAUACACG	82	15	835	2	8	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2257511-2258054	Cluster_5604	Pocillopora_meandrina_HIv1___Sc0000020	2257511	2258054	544	641	166	0.062402496099843996	-	UGAAUAACCACUGAGACGUUCGGUAGA	61	28	578	10	6	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2259957-2262435	Cluster_5605	Pocillopora_meandrina_HIv1___Sc0000020	2259957	2262435	2479	9314	1054	0.049280652780760145	-	UGAGACGAAACCCGACUACAGAAUAGCU	1562	43	8864	23	29	68	287	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2339084-2339501	Cluster_5606	Pocillopora_meandrina_HIv1___Sc0000020	2339084	2339501	418	325	16	0.021538461538461538	-	CGGCCUGAAAAAAAAAA	196	319	3	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2446206-2446622	Cluster_5607	Pocillopora_meandrina_HIv1___Sc0000020	2446206	2446622	417	334	30	0.005988023952095809	-	GAUGGAUGGAGACCGCU	238	327	3	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2449892-2450318	Cluster_5608	Pocillopora_meandrina_HIv1___Sc0000020	2449892	2450318	427	196	92	0.00510204081632653	-	GACGGUGUAUGCCUCUGAUGGUUGUA	18	70	87	7	12	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2454190-2454610	Cluster_5609	Pocillopora_meandrina_HIv1___Sc0000020	2454190	2454610	421	129	28	0.0	-	UCCAGCACCAAUGUUAUUGUUA	40	17	1	49	51	11	0	22	N	spi-mir-temp-26_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000020:2455027-2455510	Cluster_5610	Pocillopora_meandrina_HIv1___Sc0000020	2455027	2455510	484	711	204	0.0	-	CUAGCCCCGUGCUCCUGUAACAUUU	167	185	360	35	65	23	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2557825-2558240	Cluster_5611	Pocillopora_meandrina_HIv1___Sc0000020	2557825	2558240	416	5135	54	1.0	+	GUUCUAUUUUGUUGGC	4607	5132	1	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2571080-2571525	Cluster_5612	Pocillopora_meandrina_HIv1___Sc0000020	2571080	2571525	446	2517	200	0.001986491855383393	-	GGCCGUGAUCGUAUAGUGGUUAGUACAUU	779	412	2044	14	7	8	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2582171-2582598	Cluster_5613	Pocillopora_meandrina_HIv1___Sc0000020	2582171	2582598	428	253	172	0.07509881422924901	-	GCACAUAUACUAAAAUUGGAACGAUACAGA	11	55	111	25	32	18	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2598846-2599327	Cluster_5614	Pocillopora_meandrina_HIv1___Sc0000020	2598846	2599327	482	2375	784	0.9785263157894737	+	UUGGAACGAUACAGAGAAGAUUAGCA	75	658	1004	237	129	172	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2609484-2609985	Cluster_5615	Pocillopora_meandrina_HIv1___Sc0000020	2609484	2609985	502	9129	1711	0.009749151057070873	-	GCACAUAUACUAAAAUUGGAACGAUA	231	2126	3985	756	650	950	662	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2623402-2623828	Cluster_5616	Pocillopora_meandrina_HIv1___Sc0000020	2623402	2623828	427	148	57	0.04054054054054054	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	33	0	135	0	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2642180-2642605	Cluster_5617	Pocillopora_meandrina_HIv1___Sc0000020	2642180	2642605	426	647	65	0.9984544049459042	+	GGCCGUGAUCGUAUAGUGG	190	509	97	4	6	5	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2644695-2645122	Cluster_5618	Pocillopora_meandrina_HIv1___Sc0000020	2644695	2645122	428	207	85	0.9758454106280193	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	49	1	205	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2645517-2645926	Cluster_5619	Pocillopora_meandrina_HIv1___Sc0000020	2645517	2645926	410	153	83	0.49673202614379086	.	ACUGGAUACAAAACUGCUCGAUGC	38	1	93	1	0	5	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2844026-2844600	Cluster_5620	Pocillopora_meandrina_HIv1___Sc0000020	2844026	2844600	575	969	347	0.7905056759545923	.	UUCGAAGAGAACAAACUACCUGCAAGC	116	21	847	15	4	18	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2844636-2845066	Cluster_5621	Pocillopora_meandrina_HIv1___Sc0000020	2844636	2845066	431	1466	150	0.03956343792633015	-	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	305	1	1429	3	5	7	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2848877-2849478	Cluster_5622	Pocillopora_meandrina_HIv1___Sc0000020	2848877	2849478	602	311	89	0.05144694533762058	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	82	2	292	0	0	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2873316-2873820	Cluster_5623	Pocillopora_meandrina_HIv1___Sc0000020	2873316	2873820	505	28227	577	0.9996457292663053	+	GGCCGUGAUCGUAUAGUGGUUAGUACAUU	8944	4212	23671	41	20	64	219	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2989771-2990214	Cluster_5624	Pocillopora_meandrina_HIv1___Sc0000020	2989771	2990214	444	272	34	0.4264705882352941	.	UGUUUGAUUUUUACAGACUAGCGCUCUUAA	60	20	195	4	10	35	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3034007-3034545	Cluster_5625	Pocillopora_meandrina_HIv1___Sc0000020	3034007	3034545	539	602	227	0.10132890365448505	-	UCCGGUCAGAUUCUUUCCCACUAGCUC	46	19	530	0	9	12	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3036056-3036482	Cluster_5626	Pocillopora_meandrina_HIv1___Sc0000020	3036056	3036482	427	293	131	0.9010238907849829	+	UUGGAACGUGUUGCUGAACGCUUGCUA	49	15	251	8	6	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3038315-3038790	Cluster_5627	Pocillopora_meandrina_HIv1___Sc0000020	3038315	3038790	476	402	124	0.024875621890547265	-	UCAAUUGUUUACUUUCCUGGCAGGUUGCC	68	8	371	8	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3257820-3258260	Cluster_5628	Pocillopora_meandrina_HIv1___Sc0000020	3257820	3258260	441	1163	158	0.9862424763542562	+	UCUUCCACUGAUCGUUGAGUUGAAGACUA	208	17	1008	21	19	26	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3808510-3808933	Cluster_5629	Pocillopora_meandrina_HIv1___Sc0000020	3808510	3808933	424	148	44	0.0	-	AAGGAAAAGAUCUGAAUCACCGAAUGGUUU	40	3	139	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3891312-3891737	Cluster_5630	Pocillopora_meandrina_HIv1___Sc0000020	3891312	3891737	426	116	32	0.896551724137931	+	AUAGAUCCAAAAGGUAAAAUUCCAGAA	29	9	104	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4042336-4042752	Cluster_5631	Pocillopora_meandrina_HIv1___Sc0000020	4042336	4042752	417	156	54	0.057692307692307696	-	CUCUGUAGCAGUCAAUU	45	69	80	1	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4052858-4053283	Cluster_5632	Pocillopora_meandrina_HIv1___Sc0000020	4052858	4053283	426	180	66	0.9611111111111111	+	UUUGUUAGGAGAGUCUGCAACUAAGC	31	6	167	0	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4152989-4153419	Cluster_5633	Pocillopora_meandrina_HIv1___Sc0000020	4152989	4153419	431	621	190	0.9855072463768116	+	UGACUGACUGUGCUUGUGUACGAUACA	79	3	604	3	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4269388-4269816	Cluster_5634	Pocillopora_meandrina_HIv1___Sc0000020	4269388	4269816	429	276	117	0.7934782608695652	.	UGACUAUUCAACAGCUGUUCUUCUACCG	38	5	252	4	1	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4295667-4296095	Cluster_5635	Pocillopora_meandrina_HIv1___Sc0000020	4295667	4296095	429	166	47	0.0	-	UGUGCCAAAGAUUUAGAACGAAAGAACGA	51	1	161	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4304724-4305153	Cluster_5636	Pocillopora_meandrina_HIv1___Sc0000020	4304724	4305153	430	219	71	0.9908675799086758	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	72	2	216	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4385019-4385501	Cluster_5637	Pocillopora_meandrina_HIv1___Sc0000020	4385019	4385501	483	692	162	0.9219653179190751	+	UGUUUCAAAGAAAGUCACCAAGGCCAAGA	174	19	657	3	3	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4408579-4409006	Cluster_5638	Pocillopora_meandrina_HIv1___Sc0000020	4408579	4409006	428	171	47	0.0	-	UGUGCCAAAGAUUUAGAACGAAAGAACGA	43	0	165	3	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4615931-4616347	Cluster_5639	Pocillopora_meandrina_HIv1___Sc0000020	4615931	4616347	417	204	31	0.9068627450980392	+	UCCCCGCAUCUCCACCU	112	188	12	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4625045-4625486	Cluster_5640	Pocillopora_meandrina_HIv1___Sc0000020	4625045	4625486	442	276	145	0.0	-	CCAGUCGCUGAAUUCGGGUACUGUAGACU	14	94	109	23	14	21	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4921931-4922354	Cluster_5641	Pocillopora_meandrina_HIv1___Sc0000020	4921931	4922354	424	108	24	1.0	+	UACCGUAGAACUUUCCAGAACAUU	54	10	24	1	1	1	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4935851-4936265	Cluster_5642	Pocillopora_meandrina_HIv1___Sc0000020	4935851	4936265	415	202	16	0.0	-	CGCUUGAUUUUGAUU	158	202	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5066931-5067527	Cluster_5643	Pocillopora_meandrina_HIv1___Sc0000020	5066931	5067527	597	5505	500	0.9961852861035423	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	831	15	5434	2	5	14	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5120302-5120732	Cluster_5644	Pocillopora_meandrina_HIv1___Sc0000020	5120302	5120732	431	2358	197	0.010178117048346057	-	UUCGAAGAAACUCUUGCCAUCGCCUGGA	791	3	2298	0	3	4	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5121680-5122107	Cluster_5645	Pocillopora_meandrina_HIv1___Sc0000020	5121680	5122107	428	94	7	0.010638297872340425	-	UACCAAGGUCUUGUAGUCUAGUACAACU	68	1	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5197520-5197934	Cluster_5646	Pocillopora_meandrina_HIv1___Sc0000020	5197520	5197934	415	86	5	0.9767441860465116	+	AUCCAGCGAUCGCGG	74	86	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5222988-5223470	Cluster_5647	Pocillopora_meandrina_HIv1___Sc0000020	5222988	5223470	483	1059	186	0.9867799811142587	+	AAUGGGAAAACGAGAACAGCGUGA	104	29	632	15	16	145	222	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5315836-5316254	Cluster_5648	Pocillopora_meandrina_HIv1___Sc0000020	5315836	5316254	419	160	37	0.79375	.	AUAUGAGAUUAUGAAAGUA	91	137	13	3	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5327766-5328181	Cluster_5649	Pocillopora_meandrina_HIv1___Sc0000020	5327766	5328181	416	152	26	0.0	-	CAGCUGUGACCUCAUU	100	133	13	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5453827-5454256	Cluster_5650	Pocillopora_meandrina_HIv1___Sc0000020	5453827	5454256	430	1254	55	0.9992025518341308	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUG	1012	0	1254	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5490480-5490903	Cluster_5651	Pocillopora_meandrina_HIv1___Sc0000020	5490480	5490903	424	238	120	0.7899159663865546	.	GUGGAGUUAAAAGUAGGGACAAC	13	18	162	6	7	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5542041-5542469	Cluster_5652	Pocillopora_meandrina_HIv1___Sc0000020	5542041	5542469	429	391	56	0.015345268542199489	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	272	1	384	0	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5542610-5543012	Cluster_5653	Pocillopora_meandrina_HIv1___Sc0000020	5542610	5543012	403	191	103	0.41361256544502617	.	UUUGCUCUUUAUCGGGUGUCUGGACCAU	11	2	179	0	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5600503-5601310	Cluster_5654	Pocillopora_meandrina_HIv1___Sc0000020	5600503	5601310	808	153313	1100	0.9936339384135723	+	UUCUGCUGAACUACUUUGAGAACGAGU	75782	982	149462	94	87	241	2447	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5780162-5780592	Cluster_5655	Pocillopora_meandrina_HIv1___Sc0000020	5780162	5780592	431	778	86	0.9922879177377892	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	269	1	772	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5821891-5822314	Cluster_5656	Pocillopora_meandrina_HIv1___Sc0000020	5821891	5822314	424	548	68	0.8759124087591241	+	AGUGACAAGAUUUUUCCUGAUGUA	206	10	60	5	46	191	236	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5872644-5873058	Cluster_5657	Pocillopora_meandrina_HIv1___Sc0000020	5872644	5873058	415	399	10	0.017543859649122806	-	GGUUGGAUCCGGCCA	384	394	3	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5914229-5914657	Cluster_5658	Pocillopora_meandrina_HIv1___Sc0000020	5914229	5914657	429	106	15	0.9811320754716981	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	46	2	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5915278-5915698	Cluster_5659	Pocillopora_meandrina_HIv1___Sc0000020	5915278	5915698	421	127	80	0.9763779527559056	+	UGGGAAAACGAGAACAGCGUGAGUGUUU	11	1	106	4	0	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5931893-5932319	Cluster_5660	Pocillopora_meandrina_HIv1___Sc0000020	5931893	5932319	427	150	50	0.03333333333333333	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	43	1	148	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5977080-5978351	Cluster_5661	Pocillopora_meandrina_HIv1___Sc0000020	5977080	5978351	1272	1236	507	0.10275080906148867	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	82	15	1160	9	9	11	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5979221-5979648	Cluster_5662	Pocillopora_meandrina_HIv1___Sc0000020	5979221	5979648	428	125	51	0.056	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	50	0	119	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5979732-5980158	Cluster_5663	Pocillopora_meandrina_HIv1___Sc0000020	5979732	5980158	427	302	125	0.09933774834437085	-	UCCAAUCACACACAGUUCUCCUGCGGC	59	4	284	1	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5980533-5980960	Cluster_5664	Pocillopora_meandrina_HIv1___Sc0000020	5980533	5980960	428	227	109	0.07488986784140969	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	37	2	212	0	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6091599-6092028	Cluster_5665	Pocillopora_meandrina_HIv1___Sc0000020	6091599	6092028	430	366	45	0.9754098360655737	+	CGAAGAUGGAAUCAAUAAAUGCAGAACAGG	144	6	313	3	44	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6480082-6480500	Cluster_5666	Pocillopora_meandrina_HIv1___Sc0000020	6480082	6480500	419	163	21	0.006134969325153374	-	UUUGACAACUUUUGACGGA	57	163	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6695856-6696272	Cluster_5667	Pocillopora_meandrina_HIv1___Sc0000020	6695856	6696272	417	251	9	0.01195219123505976	-	AUGGAAGAAGAUCUUUU	209	248	1	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6703789-6704212	Cluster_5668	Pocillopora_meandrina_HIv1___Sc0000020	6703789	6704212	424	754	77	0.9986737400530504	+	GACGGAUUGAGGAAGCA	523	633	75	6	7	3	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:191190-191604	Cluster_5669	Pocillopora_meandrina_HIv1___Sc0000021	191190	191604	415	1997	18	0.9969954932398598	+	GGUUGGAUCCGGCCA	1953	1990	2	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:193763-194190	Cluster_5670	Pocillopora_meandrina_HIv1___Sc0000021	193763	194190	428	84	16	0.011904761904761904	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:324463-324937	Cluster_5671	Pocillopora_meandrina_HIv1___Sc0000021	324463	324937	475	45753	2466	0.9982951937577864	+	GAGGUCCGGACGGUGGAGGGUUAUCCACU	5122	10706	29738	2176	1503	879	751	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:326001-326467	Cluster_5672	Pocillopora_meandrina_HIv1___Sc0000021	326001	326467	467	2780	445	0.9964028776978417	+	AUACCCUUCUCAUAACUUGACUUCCU	270	371	1886	99	180	101	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:326663-327132	Cluster_5673	Pocillopora_meandrina_HIv1___Sc0000021	326663	327132	470	240434	4130	0.9995009025345833	+	GAGGUCCGGACGGCUGAGGGUUAUCUCACA	47919	30395	176288	10146	12579	6898	4128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:592891-593301	Cluster_5674	Pocillopora_meandrina_HIv1___Sc0000021	592891	593301	411	121	93	1.0	+	CCUGGAUUUGACGAGCU	5	34	51	13	11	11	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:593502-593930	Cluster_5675	Pocillopora_meandrina_HIv1___Sc0000021	593502	593930	429	275	215	1.0	+	CCGCUCGGAGUGCCUGAUGAAAAGACA	5	83	100	25	26	13	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:608946-609366	Cluster_5676	Pocillopora_meandrina_HIv1___Sc0000021	608946	609366	421	235	170	0.9957446808510638	+	UUGCGGUAGAAAUACGGAAGAGACU	5	67	87	19	15	17	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:758132-758551	Cluster_5677	Pocillopora_meandrina_HIv1___Sc0000021	758132	758551	420	1918	90	0.9994786235662148	+	CCCGGGUCUCGGCACCA	630	1918	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:784913-785341	Cluster_5678	Pocillopora_meandrina_HIv1___Sc0000021	784913	785341	429	135	37	0.007407407407407408	-	UAAGCAACAUGGGAGCUAUGGUAUUCUUG	33	6	114	3	9	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:896386-896814	Cluster_5679	Pocillopora_meandrina_HIv1___Sc0000021	896386	896814	429	496	63	0.012096774193548387	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	316	6	484	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:916951-917365	Cluster_5680	Pocillopora_meandrina_HIv1___Sc0000021	916951	917365	415	97	14	0.0	-	CGGGCUGAGAUUUGU	77	90	5	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:975531-975948	Cluster_5681	Pocillopora_meandrina_HIv1___Sc0000021	975531	975948	418	252	161	0.003968253968253968	-	AGCCGGUUUUAGGAAUGUUA	9	87	64	34	26	27	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:985212-985614	Cluster_5682	Pocillopora_meandrina_HIv1___Sc0000021	985212	985614	403	129	51	0.0	-	GUGUGGUCCGGACGGG	60	99	18	4	3	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1004813-1005216	Cluster_5683	Pocillopora_meandrina_HIv1___Sc0000021	1004813	1005216	404	232	146	0.06465517241379311	-	AAGGAGUGUGUAACA	60	135	44	12	16	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1005509-1005931	Cluster_5684	Pocillopora_meandrina_HIv1___Sc0000021	1005509	1005931	423	295	158	0.0	-	AAAAAGAAUGGGACUGUCUGUAAUA	26	100	98	14	18	43	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1065156-1065872	Cluster_5685	Pocillopora_meandrina_HIv1___Sc0000021	1065156	1065872	717	404	202	0.08415841584158416	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	33	5	371	6	2	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1068005-1068536	Cluster_5686	Pocillopora_meandrina_HIv1___Sc0000021	1068005	1068536	532	744	256	0.06182795698924731	-	UGUACUAAUCUUUCCGCCUGACCAUUGGUU	116	6	704	4	5	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1068665-1069095	Cluster_5687	Pocillopora_meandrina_HIv1___Sc0000021	1068665	1069095	431	611	142	0.02127659574468085	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	109	4	593	4	0	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1316204-1316618	Cluster_5688	Pocillopora_meandrina_HIv1___Sc0000021	1316204	1316618	415	150	20	0.0	-	UCGACCGUGGUGGAU	53	150	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1499718-1500140	Cluster_5689	Pocillopora_meandrina_HIv1___Sc0000021	1499718	1500140	423	1230	66	0.9983739837398374	+	UGUGAUUGGAGACUUUUAUCGU	674	56	1	10	1084	66	13	22	N	spi-mir-temp-20_Stylophora_pistillata_Liew_et_al._2014_NA;apa-mir-2037_Exaiptasia_pallida_Baumgarten_et_al._2017_miR-2037;_Nve;_Spis;eca-nve-F-miR-2037_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;mse-nve-F-miR-2037-3p_Metridium_senile_Praher_et_al._2021_Transcriptome-level;sca-nve-F-miR-2037-3p_Scolanthus_callimorphus_Praher_et_al._2021_Transcriptome-level;ami-nve-F-miR-2037-3p_Acropora_millepora_Praher_et_al._2021_NA;spi-nve-F-miR-2037_Stylophora_pistillata_Praher_et_al._2021_NA;avi-miR-temp-2037_Anemonia_viridis_Urbarova_et_al._2018_NA
Pocillopora_meandrina_HIv1___Sc0000021:1662373-1662789	Cluster_5690	Pocillopora_meandrina_HIv1___Sc0000021	1662373	1662789	417	106	43	0.9056603773584906	+	UGCUUUGGACGAAAUUUCGAGGUUCACACC	17	8	88	2	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1663270-1663727	Cluster_5691	Pocillopora_meandrina_HIv1___Sc0000021	1663270	1663727	458	5055	164	0.013847675568743818	-	UGCAUUGUGUUUGCUUCCAGACUUGACUU	1155	73	4921	3	14	25	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1663833-1664359	Cluster_5692	Pocillopora_meandrina_HIv1___Sc0000021	1663833	1664359	527	1292	182	0.923374613003096	+	AUUUUAAUCAUGUUGGGACUUAAAGGUG	238	17	1177	2	15	49	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1708235-1708668	Cluster_5693	Pocillopora_meandrina_HIv1___Sc0000021	1708235	1708668	434	198	56	0.5606060606060606	.	UACCAUAGAUCUCUCCAAAGCAUUUGACU	36	4	187	3	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1805532-1805954	Cluster_5694	Pocillopora_meandrina_HIv1___Sc0000021	1805532	1805954	423	168	12	0.0	-	UUUAGAUUGUGUAAGUAGUGUGA	89	10	1	14	40	92	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1807854-1808415	Cluster_5695	Pocillopora_meandrina_HIv1___Sc0000021	1807854	1808415	562	1087	271	0.577736890524379	.	AAAAGAACGAAGACGCUGCCAAGA	63	80	832	39	15	26	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1810323-1810759	Cluster_5696	Pocillopora_meandrina_HIv1___Sc0000021	1810323	1810759	437	1006	136	0.9592445328031809	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	408	21	955	17	3	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1814973-1815409	Cluster_5697	Pocillopora_meandrina_HIv1___Sc0000021	1814973	1815409	437	835	139	0.792814371257485	.	UCAAGCUCUUCCUGACACCUGUUGUGU	232	13	748	9	8	12	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1823807-1824425	Cluster_5698	Pocillopora_meandrina_HIv1___Sc0000021	1823807	1824425	619	570	131	0.6263157894736842	.	AAGGAUACCACAUUCGGAAGUGUAAGAGA	120	31	476	8	8	30	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2036658-2037086	Cluster_5699	Pocillopora_meandrina_HIv1___Sc0000021	2036658	2037086	429	149	7	0.0	-	UAACGAGAUUAAAAUGGCAAUGAACAAUA	84	2	147	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2067953-2068641	Cluster_5700	Pocillopora_meandrina_HIv1___Sc0000021	2067953	2068641	689	1359	358	0.4576894775570272	.	GUACUCGAUAUUGUCUGGAAUUCUGCCA	303	13	1284	4	13	14	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2068762-2069177	Cluster_5701	Pocillopora_meandrina_HIv1___Sc0000021	2068762	2069177	416	161	109	0.7391304347826086	.	UCCGGUCAAUGUUUAGAGAGCUGAAUAAAU	9	1	146	1	0	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2290519-2290934	Cluster_5702	Pocillopora_meandrina_HIv1___Sc0000021	2290519	2290934	416	763	28	0.9921363040629095	+	UCUGGAGUUAAGGCG	394	758	3	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2342535-2343348	Cluster_5703	Pocillopora_meandrina_HIv1___Sc0000021	2342535	2343348	814	433	245	0.07852193995381063	-	UGAUUUUGGAAUGUUGUUUACGUUGUG	18	2	405	5	2	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2362599-2363026	Cluster_5704	Pocillopora_meandrina_HIv1___Sc0000021	2362599	2363026	428	139	65	0.15827338129496402	-	UGUGUUAACGUUUCACGGACAAGCUACCGA	46	21	108	1	4	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2484436-2485055	Cluster_5705	Pocillopora_meandrina_HIv1___Sc0000021	2484436	2485055	620	705	145	0.577304964539007	.	UGAAGAAUUCACAGUUACUUACUUUAGAUA	92	11	682	4	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2487317-2487747	Cluster_5706	Pocillopora_meandrina_HIv1___Sc0000021	2487317	2487747	431	784	123	0.003826530612244898	-	CAACAAAUCAAACUUGGAGGCUCUUCA	110	3	741	7	0	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2598247-2598676	Cluster_5707	Pocillopora_meandrina_HIv1___Sc0000021	2598247	2598676	430	607	143	0.9917627677100495	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	133	2	598	0	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2598797-2599326	Cluster_5708	Pocillopora_meandrina_HIv1___Sc0000021	2598797	2599326	530	642	249	0.9922118380062306	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	44	4	625	3	0	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2601469-2601896	Cluster_5709	Pocillopora_meandrina_HIv1___Sc0000021	2601469	2601896	428	143	72	0.9790209790209791	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	33	1	138	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2658471-2658888	Cluster_5710	Pocillopora_meandrina_HIv1___Sc0000021	2658471	2658888	418	125	29	0.768	.	CAAACCACUAAUUGUUGA	71	93	29	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2907106-2907527	Cluster_5711	Pocillopora_meandrina_HIv1___Sc0000021	2907106	2907527	422	139	28	0.0	-	CGGGCUGUGAAAUAUCUUUA	39	45	36	8	17	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2924427-2924957	Cluster_5712	Pocillopora_meandrina_HIv1___Sc0000021	2924427	2924957	531	1263	372	1.0	+	AGUUGAUGAUGAUAAACACUGCGC	286	168	342	57	48	167	481	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3151853-3152285	Cluster_5713	Pocillopora_meandrina_HIv1___Sc0000021	3151853	3152285	433	312	91	0.9903846153846154	+	UGUACAUUCUCCCGAUCGCAGGACAGCU	40	0	307	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3254633-3255038	Cluster_5714	Pocillopora_meandrina_HIv1___Sc0000021	3254633	3255038	406	201	96	0.9800995024875622	+	UACGUAGACAUGAUACCC	26	46	146	1	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3261369-3262002	Cluster_5715	Pocillopora_meandrina_HIv1___Sc0000021	3261369	3262002	634	2006	272	0.010468594217347957	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	445	6	1964	0	7	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3399015-3399445	Cluster_5716	Pocillopora_meandrina_HIv1___Sc0000021	3399015	3399445	431	767	119	0.007822685788787484	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	298	26	715	12	3	4	7	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3402070-3402499	Cluster_5717	Pocillopora_meandrina_HIv1___Sc0000021	3402070	3402499	430	149	43	0.0	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	50	18	122	1	5	2	1	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3403523-3403994	Cluster_5718	Pocillopora_meandrina_HIv1___Sc0000021	3403523	3403994	472	123411	1770	0.0001701631134987967	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	27213	13321	103317	2971	1749	818	1235	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3404645-3405074	Cluster_5719	Pocillopora_meandrina_HIv1___Sc0000021	3404645	3405074	430	104	26	0.009615384615384616	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	40	7	95	0	1	0	1	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3412619-3413045	Cluster_5720	Pocillopora_meandrina_HIv1___Sc0000021	3412619	3413045	427	248	135	0.25	.	UCCUGACAUGAUUCUUUGAGUUCUUUC	18	3	222	0	4	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3413092-3413512	Cluster_5721	Pocillopora_meandrina_HIv1___Sc0000021	3413092	3413512	421	139	65	0.7697841726618705	.	UAUGCAUUCAAUGAUCGUGGUCGG	22	1	66	2	5	15	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3414502-3414911	Cluster_5722	Pocillopora_meandrina_HIv1___Sc0000021	3414502	3414911	410	103	33	0.23300970873786409	.	UGUUACAAAACCAUUAGAACUAUCAGUU	24	2	80	1	5	0	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3418513-3419451	Cluster_5723	Pocillopora_meandrina_HIv1___Sc0000021	3418513	3419451	939	11228	1009	0.0023156394727467046	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	1134	1226	9107	304	216	170	205	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA;spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3422717-3423187	Cluster_5724	Pocillopora_meandrina_HIv1___Sc0000021	3422717	3423187	471	18250	862	0.0007123287671232877	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	2880	2019	14627	685	420	259	240	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3424993-3425414	Cluster_5725	Pocillopora_meandrina_HIv1___Sc0000021	3424993	3425414	422	123	41	0.0	-	GAGGUCCGGAUGGGU	23	49	72	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3426420-3426906	Cluster_5726	Pocillopora_meandrina_HIv1___Sc0000021	3426420	3426906	487	1546	422	0.9902975420439845	+	CUCCCCUCUUCCACUCACUUGACCUCCU	105	423	881	79	79	50	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3428560-3429035	Cluster_5727	Pocillopora_meandrina_HIv1___Sc0000021	3428560	3429035	476	33309	945	0.003302410759854694	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	6543	3245	27500	969	765	429	401	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3442714-3443124	Cluster_5728	Pocillopora_meandrina_HIv1___Sc0000021	3442714	3443124	411	115	70	0.06086956521739131	-	CAUCCGCUACUUUGACUU	7	80	16	12	5	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3460874-3461359	Cluster_5729	Pocillopora_meandrina_HIv1___Sc0000021	3460874	3461359	486	319	85	0.9686520376175548	+	GAGGUCCGGAUGGUUGAGGGUUAUCAAAUC	46	54	238	13	1	5	8	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3462997-3463468	Cluster_5730	Pocillopora_meandrina_HIv1___Sc0000021	3462997	3463468	472	7956	694	0.003393665158371041	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	944	830	6396	297	240	111	82	N	N	spi-mir-temp-5_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:3535980-3536395	Cluster_5731	Pocillopora_meandrina_HIv1___Sc0000021	3535980	3536395	416	406	27	0.0024630541871921183	-	AGUGUGCUCCUAACU	216	404	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4157525-4157936	Cluster_5732	Pocillopora_meandrina_HIv1___Sc0000021	4157525	4157936	412	146	79	0.4315068493150685	.	UGAGGACAUAACUACAACAGAAGACACAACA	7	16	119	7	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4236543-4236968	Cluster_5733	Pocillopora_meandrina_HIv1___Sc0000021	4236543	4236968	426	104	40	0.9711538461538461	+	UGUGUAGAUAUGUCUUUUGGACAGGA	28	0	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4328885-4329594	Cluster_5734	Pocillopora_meandrina_HIv1___Sc0000021	4328885	4329594	710	1157	317	0.8375108038029386	+	UUCGGCAAAAACUAAAAGCGGGCGAAGA	286	9	1054	5	4	12	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4351817-4351909	Cluster_5735	Pocillopora_meandrina_HIv1___Sc0000021	4351817	4351909	93	160	42	1.0	+	ACUGAUAUUCACCAAGUG	32	74	4	42	24	13	3	N	Y	spi-mir-temp-34_Stylophora_pistillata_Liew_et_al._2014_NA
Pocillopora_meandrina_HIv1___Sc0000021:4582089-4582510	Cluster_5736	Pocillopora_meandrina_HIv1___Sc0000021	4582089	4582510	422	121	23	0.049586776859504134	-	UGGGCUGAAAUCAUACACGUGAU	31	11	6	28	33	34	9	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4665570-4666091	Cluster_5737	Pocillopora_meandrina_HIv1___Sc0000021	4665570	4666091	522	418	124	0.014354066985645933	-	UCGAAUCCCACUUCUGACACCA	99	268	10	28	106	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4684925-4685354	Cluster_5738	Pocillopora_meandrina_HIv1___Sc0000021	4684925	4685354	430	93	22	0.989247311827957	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	1	92	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4711498-4711915	Cluster_5739	Pocillopora_meandrina_HIv1___Sc0000021	4711498	4711915	418	173	62	0.2832369942196532	.	GUGGUGGACUGCUUGCAAU	21	145	21	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4905508-4906190	Cluster_5740	Pocillopora_meandrina_HIv1___Sc0000021	4905508	4906190	683	4281	510	0.32212099976640973	.	GUAUCUUCGAAGCUGGAUUACUGUAAUGCC	307	14	4125	6	13	24	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5105603-5106129	Cluster_5741	Pocillopora_meandrina_HIv1___Sc0000021	5105603	5106129	527	762	137	0.41601049868766404	.	UAUUCUUAUCAUCUGCGUUUGGUCUACUGC	121	5	748	0	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5110514-5110942	Cluster_5742	Pocillopora_meandrina_HIv1___Sc0000021	5110514	5110942	429	184	5	1.0	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	165	0	184	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5129429-5129855	Cluster_5743	Pocillopora_meandrina_HIv1___Sc0000021	5129429	5129855	427	103	41	0.9223300970873787	+	UGAAACUCUGGUCUGAAAAUAUUUUUAAAAC	24	4	93	2	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5199336-5199754	Cluster_5744	Pocillopora_meandrina_HIv1___Sc0000021	5199336	5199754	419	227	51	0.01762114537444934	-	CACCCCUUGUAGUAGUCAG	40	214	1	7	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5276848-5277938	Cluster_5745	Pocillopora_meandrina_HIv1___Sc0000021	5276848	5277938	1091	105482	2457	0.9999620788380956	+	UUCAUUCUAACAGACGCUUUGUAAAAUCCU	9773	303	102764	184	567	1495	169	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5278062-5278487	Cluster_5746	Pocillopora_meandrina_HIv1___Sc0000021	5278062	5278487	426	246	101	0.9959349593495935	+	UUCUUUGACGUGUUACACCAUACAGAUGGUC	53	3	237	1	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5306354-5306783	Cluster_5747	Pocillopora_meandrina_HIv1___Sc0000021	5306354	5306783	430	1182	80	0.9966159052453468	+	UUCGAAUGAAGCAAGGUGUUCCUGAACUU	600	8	1169	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5319271-5319708	Cluster_5748	Pocillopora_meandrina_HIv1___Sc0000021	5319271	5319708	438	470	144	0.997872340425532	+	GUUAGAAUGAAGAAGGGCGUUCCUUCACU	44	99	322	12	2	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5329308-5329728	Cluster_5749	Pocillopora_meandrina_HIv1___Sc0000021	5329308	5329728	421	104	57	1.0	+	UCGUUUCUUCUGGAAUCUCAAUUCUGUGGA	9	0	100	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5602206-5603069	Cluster_5750	Pocillopora_meandrina_HIv1___Sc0000021	5602206	5603069	864	1977	381	0.03136064744562468	-	UGGACGUACGCAUUCACGAUCUCGCUCGUU	125	6	1942	6	4	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5603857-5604284	Cluster_5751	Pocillopora_meandrina_HIv1___Sc0000021	5603857	5604284	428	238	87	0.08403361344537816	-	UGAAUUCUUCGUAAACGGUUUCCUGGUC	74	4	223	2	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5605710-5606138	Cluster_5752	Pocillopora_meandrina_HIv1___Sc0000021	5605710	5606138	429	176	68	0.14204545454545456	-	UUUGCUUGCCAGAUCCUUUAUCCAAUGAA	24	2	153	0	0	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5607117-5607544	Cluster_5753	Pocillopora_meandrina_HIv1___Sc0000021	5607117	5607544	428	141	42	0.02127659574468085	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	39	0	139	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5659077-5659491	Cluster_5754	Pocillopora_meandrina_HIv1___Sc0000021	5659077	5659491	415	154	40	0.23376623376623376	.	GGAGGUUGGCUUAGA	72	133	13	2	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5659494-5659922	Cluster_5755	Pocillopora_meandrina_HIv1___Sc0000021	5659494	5659922	429	240	68	0.9916666666666667	+	AGAAGAUGGUUCAUACACUGUUGUUAUGA	73	21	196	7	9	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5770832-5771370	Cluster_5756	Pocillopora_meandrina_HIv1___Sc0000021	5770832	5771370	539	3492	630	0.9982817869415808	+	CUAUGACUGGUCAUUUCAACUGUAACAUUG	333	386	2041	61	169	225	610	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5811526-5811954	Cluster_5757	Pocillopora_meandrina_HIv1___Sc0000021	5811526	5811954	429	285	151	1.0	+	UGGCAAAAUCUACGAGGUCCGACUCAUGAU	28	67	178	7	11	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5820043-5820457	Cluster_5758	Pocillopora_meandrina_HIv1___Sc0000021	5820043	5820457	415	222	49	0.25675675675675674	.	ACGACUGCUGCCGGU	159	197	15	3	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5886427-5886842	Cluster_5759	Pocillopora_meandrina_HIv1___Sc0000021	5886427	5886842	416	432	24	0.0023148148148148147	-	CGUGGAAGGUAGGUCC	279	427	4	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5973937-5974361	Cluster_5760	Pocillopora_meandrina_HIv1___Sc0000021	5973937	5974361	425	88	35	0.03409090909090909	-	UGUGUAGAUAUGUCUUUUGGACAGGA	19	1	86	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6003028-6003443	Cluster_5761	Pocillopora_meandrina_HIv1___Sc0000021	6003028	6003443	416	597	26	0.0	-	UUGACAACUUUUGACA	309	596	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6041010-6041435	Cluster_5762	Pocillopora_meandrina_HIv1___Sc0000021	6041010	6041435	426	152	60	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	20	3	143	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6107460-6107961	Cluster_5763	Pocillopora_meandrina_HIv1___Sc0000021	6107460	6107961	502	493	128	0.07707910750507099	-	UGAAUGACUUCGUUUGUGCAUUGGUAGGC	85	0	478	2	0	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6116528-6116932	Cluster_5764	Pocillopora_meandrina_HIv1___Sc0000021	6116528	6116932	405	127	83	0.8976377952755905	+	UCGUCAAUUGUGAAGGUCAUGUCAUGAA	7	1	111	0	4	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6157720-6158165	Cluster_5765	Pocillopora_meandrina_HIv1___Sc0000021	6157720	6158165	446	585	199	0.6427350427350428	.	UCACGGUAGUAGUGUUGUUCAAUAGAUU	63	18	449	3	9	72	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6160724-6161150	Cluster_5766	Pocillopora_meandrina_HIv1___Sc0000021	6160724	6161150	427	175	37	0.0	-	UGAUAUCAUCUUUAGCUCUUGAAAAUG	87	5	170	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6165598-6166346	Cluster_5767	Pocillopora_meandrina_HIv1___Sc0000021	6165598	6166346	749	702	274	0.05128205128205128	-	UAUUCAUGAUCGUUAUGCGAUAGCAGCAAC	54	5	635	1	0	6	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6166615-6167399	Cluster_5768	Pocillopora_meandrina_HIv1___Sc0000021	6166615	6167399	785	530	255	0.13584905660377358	-	UGGUUGAAUGAUGUUGUCGAGUAGAUU	45	7	452	0	26	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6171647-6172089	Cluster_5769	Pocillopora_meandrina_HIv1___Sc0000021	6171647	6172089	443	407	188	0.036855036855036855	-	UACUCUUUGUGGACUUUAAACGAUCGUAA	40	19	379	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6172139-6172583	Cluster_5770	Pocillopora_meandrina_HIv1___Sc0000021	6172139	6172583	445	490	190	0.0020408163265306124	-	UGCUUUCUCGAUGACUGCUUGUUGUGC	40	11	461	8	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6173344-6174077	Cluster_5771	Pocillopora_meandrina_HIv1___Sc0000021	6173344	6174077	734	485	198	0.006185567010309278	-	UGAGUUUGUAGAAGCAAUUUGCCGUCUGC	92	10	466	1	4	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6181744-6182314	Cluster_5772	Pocillopora_meandrina_HIv1___Sc0000021	6181744	6182314	571	603	235	0.07960199004975124	-	UGUUUGUGGUAGACUUGUUUUUGACGUG	50	19	468	12	30	34	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6183967-6184395	Cluster_5773	Pocillopora_meandrina_HIv1___Sc0000021	6183967	6184395	429	451	113	0.026607538802660754	-	UGUAGAAUCAAUCUGUUACUAAGACACC	98	2	438	8	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6186531-6186960	Cluster_5774	Pocillopora_meandrina_HIv1___Sc0000021	6186531	6186960	430	278	148	0.1366906474820144	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	32	2	259	0	0	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6188190-6189044	Cluster_5775	Pocillopora_meandrina_HIv1___Sc0000021	6188190	6189044	855	528	262	0.09659090909090909	-	UGUACUUUGUCUUUGUUGAAUUUGAUUC	26	8	495	1	4	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6191858-6192273	Cluster_5776	Pocillopora_meandrina_HIv1___Sc0000021	6191858	6192273	416	209	62	0.0430622009569378	-	UGUAUCCCAACCAAGU	127	132	68	1	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6192308-6193276	Cluster_5777	Pocillopora_meandrina_HIv1___Sc0000021	6192308	6193276	969	7141	749	0.040750595154740235	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	1797	33	6967	9	24	37	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6200869-6201439	Cluster_5778	Pocillopora_meandrina_HIv1___Sc0000021	6200869	6201439	571	439	191	0.03644646924829157	-	UUGGAACUAUUGGUGUACUAGCGCUCGAU	20	20	408	0	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6201989-6202417	Cluster_5779	Pocillopora_meandrina_HIv1___Sc0000021	6201989	6202417	429	501	83	0.001996007984031936	-	UUGUAAACUUCUCGAACAUUGGCCUAUU	117	6	488	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6211840-6212255	Cluster_5780	Pocillopora_meandrina_HIv1___Sc0000021	6211840	6212255	416	160	76	0.0	-	UUAACGACUUCAAUGAUUGCUCUUUUGGC	15	1	158	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6214988-6215440	Cluster_5781	Pocillopora_meandrina_HIv1___Sc0000021	6214988	6215440	453	386	194	0.015544041450777202	-	UGUAUGUGAGCGGCCUUGACUUGGUUGUA	23	8	360	4	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6215616-6216857	Cluster_5782	Pocillopora_meandrina_HIv1___Sc0000021	6215616	6216857	1242	11183	1470	0.02897254761691854	-	UCUGACUGACUAACAGGAUAUCUGCUUC	714	54	10829	21	42	82	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6219624-6220590	Cluster_5783	Pocillopora_meandrina_HIv1___Sc0000021	6219624	6220590	967	27645	1435	0.001519262072707542	-	UAUGUUGAAUGAGAACUGGAGACCUCGAUU	4311	631	26231	88	153	222	320	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6220880-6221308	Cluster_5784	Pocillopora_meandrina_HIv1___Sc0000021	6220880	6221308	429	422	60	0.011848341232227487	-	UAACGAGAUUAAAAUGGCAAUGAACAAUA	235	1	418	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6221535-6221964	Cluster_5785	Pocillopora_meandrina_HIv1___Sc0000021	6221535	6221964	430	414	131	0.0	-	UGCAUUGGCAUGUUUAACUUAAGUU	53	1	379	12	1	0	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6222052-6222481	Cluster_5786	Pocillopora_meandrina_HIv1___Sc0000021	6222052	6222481	430	759	137	0.0013175230566534915	-	UGUAUUCGGACAUUUGCAAUUCCACAGG	146	4	738	4	6	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6223464-6223892	Cluster_5787	Pocillopora_meandrina_HIv1___Sc0000021	6223464	6223892	429	224	93	0.03571428571428571	-	UGCAACAAGUUUGGUUUAUGGACAAAAUC	19	8	205	1	1	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6226713-6227743	Cluster_5788	Pocillopora_meandrina_HIv1___Sc0000021	6226713	6227743	1031	18274	1995	0.0016963992557732298	-	UCACAGAACCUGAACCCUCUAAUGGAUGGUC	2944	211	17696	45	110	94	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6228305-6229009	Cluster_5789	Pocillopora_meandrina_HIv1___Sc0000021	6228305	6229009	705	5332	936	0.041635408852213056	-	UCAGUGUACUUGAGAUUGUGCAGCUCA	547	81	5007	41	19	88	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6229283-6231268	Cluster_5790	Pocillopora_meandrina_HIv1___Sc0000021	6229283	6231268	1986	4226	879	0.01585423568386181	-	UGAUACUUGCAUCAACUUGCACUACUGGC	595	69	4090	11	9	25	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6232091-6233002	Cluster_5791	Pocillopora_meandrina_HIv1___Sc0000021	6232091	6233002	912	734	313	0.010899182561307902	-	UAAAUUCACUGGUUCUCUGGAGUCAACC	28	20	696	4	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6485121-6485533	Cluster_5792	Pocillopora_meandrina_HIv1___Sc0000021	6485121	6485533	413	182	99	0.9560439560439561	+	UGCGAAUCUGAAAAUUGGACGGAGAGC	22	5	169	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6485758-6486209	Cluster_5793	Pocillopora_meandrina_HIv1___Sc0000021	6485758	6486209	452	631	257	0.9049128367670365	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	74	7	567	1	6	9	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6486565-6486991	Cluster_5794	Pocillopora_meandrina_HIv1___Sc0000021	6486565	6486991	427	319	134	0.9216300940438872	+	UCCAAUCACACACAGUUCUCCUGCGGC	53	3	294	1	1	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6487009-6487615	Cluster_5795	Pocillopora_meandrina_HIv1___Sc0000021	6487009	6487615	607	1532	425	0.762402088772846	.	ACCGCUUUUAAGAUUCUGAAAC	106	21	1245	30	117	32	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6488366-6489644	Cluster_5796	Pocillopora_meandrina_HIv1___Sc0000021	6488366	6489644	1279	2837	795	0.9083538949594642	+	UUUUACAUGUUUGACCUCUGGCAGGGCA	344	26	2678	7	14	39	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:149414-149837	Cluster_5797	Pocillopora_meandrina_HIv1___Sc0000022	149414	149837	424	124	40	0.967741935483871	+	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	31	6	88	8	3	16	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:155778-156215	Cluster_5798	Pocillopora_meandrina_HIv1___Sc0000022	155778	156215	438	212	98	0.4386792452830189	.	UGAUAAAAAAACAGCAACAUCUCUGCCAGC	28	11	189	1	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:158085-158499	Cluster_5799	Pocillopora_meandrina_HIv1___Sc0000022	158085	158499	415	166	83	0.8433734939759037	+	UUCAAUCUCAGACCAUCCAGAUACU	16	2	150	0	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:159825-160246	Cluster_5800	Pocillopora_meandrina_HIv1___Sc0000022	159825	160246	422	265	122	0.7358490566037735	.	AGUGUUCUUAGUCAGCUGAAAGAAAUUUU	18	5	243	3	0	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:160663-161072	Cluster_5801	Pocillopora_meandrina_HIv1___Sc0000022	160663	161072	410	190	88	0.5631578947368421	.	UCGGAAUAUCAUUUUGAAGUCAUUUAUG	24	3	150	3	2	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:282851-283277	Cluster_5802	Pocillopora_meandrina_HIv1___Sc0000022	282851	283277	427	138	46	0.8043478260869565	+	CUGUAAUAAAACUAUCUACUGGCAAGU	35	0	135	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:318503-318947	Cluster_5803	Pocillopora_meandrina_HIv1___Sc0000022	318503	318947	445	529	91	0.998109640831758	+	UGAUAUAUGUUCAUGUUUGGGUGUAAGUGC	67	2	521	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:554095-554523	Cluster_5804	Pocillopora_meandrina_HIv1___Sc0000022	554095	554523	429	658	160	0.9969604863221885	+	UGUUGAUGUAACCGUGAUCUUUGAAGG	105	2	607	9	4	6	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:554720-555132	Cluster_5805	Pocillopora_meandrina_HIv1___Sc0000022	554720	555132	413	199	112	0.9246231155778895	+	UCCAGUCGAGUAGUGCUAAAUAAAAAUU	10	3	181	1	1	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:555710-556154	Cluster_5806	Pocillopora_meandrina_HIv1___Sc0000022	555710	556154	445	485	209	0.9175257731958762	+	UCGAAUCAAAGUACUUGAGGACUGGGG	27	6	465	0	0	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:556205-556633	Cluster_5807	Pocillopora_meandrina_HIv1___Sc0000022	556205	556633	429	242	99	0.9834710743801653	+	UGAAAAAUUUCCGGGGCUGGAGUAAUUCC	29	2	240	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:556704-557595	Cluster_5808	Pocillopora_meandrina_HIv1___Sc0000022	556704	557595	892	1796	435	0.8106904231625836	+	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	776	16	1685	5	7	19	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:557670-558302	Cluster_5809	Pocillopora_meandrina_HIv1___Sc0000022	557670	558302	633	1647	426	0.8506375227686703	+	UGUGAUAAAUGCAGCCACUCGAUACUCG	83	16	1562	9	15	10	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:558307-558727	Cluster_5810	Pocillopora_meandrina_HIv1___Sc0000022	558307	558727	421	206	104	0.13592233009708737	-	UUCAUCUUGUGAUCUAUUCGAAUUGUUU	19	11	147	9	8	16	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:559206-559633	Cluster_5811	Pocillopora_meandrina_HIv1___Sc0000022	559206	559633	428	149	43	0.9865771812080537	+	UGUAAAAUCUGGCAUCCUAUUGGAUAAC	77	4	143	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:561059-562460	Cluster_5812	Pocillopora_meandrina_HIv1___Sc0000022	561059	562460	1402	9298	1163	0.9569799956979995	+	UUGGAUUGUAAUAAGGUACAAGAGGCUG	1595	98	8868	39	47	155	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:568214-568666	Cluster_5813	Pocillopora_meandrina_HIv1___Sc0000022	568214	568666	453	892	312	0.9876681614349776	+	UGUUCUUCUUGACUCUGACGAUCUUCAAC	96	3	876	2	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:569073-569951	Cluster_5814	Pocillopora_meandrina_HIv1___Sc0000022	569073	569951	879	846	362	0.9869976359338062	+	UGCUGAAACGAUUUUGACAGGUUGUCA	52	14	797	4	7	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:570074-571207	Cluster_5815	Pocillopora_meandrina_HIv1___Sc0000022	570074	571207	1134	1385	560	0.9870036101083033	+	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	92	10	1342	2	4	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:571607-572036	Cluster_5816	Pocillopora_meandrina_HIv1___Sc0000022	571607	572036	430	208	111	0.9903846153846154	+	UGUGAUUUCUGCCUUUUCAUCCGGUGACU	16	2	201	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:572515-574176	Cluster_5817	Pocillopora_meandrina_HIv1___Sc0000022	572515	574176	1662	9198	2412	0.9287888671450315	+	UGAUAGACUGCACGACGAUUUACGUCA	491	130	8337	71	71	276	313	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:574230-575302	Cluster_5818	Pocillopora_meandrina_HIv1___Sc0000022	574230	575302	1073	8258	685	0.9969726325986922	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2135	7	8136	2	44	32	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:579552-579977	Cluster_5819	Pocillopora_meandrina_HIv1___Sc0000022	579552	579977	426	105	37	0.9904761904761905	+	UGUGUAGAUAUGUCUUUUGGACAGGA	32	1	102	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:583226-583653	Cluster_5820	Pocillopora_meandrina_HIv1___Sc0000022	583226	583653	428	222	114	0.972972972972973	+	UCGGACUUGACUGCGUAAAUGGCGUGAAA	22	10	201	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:591923-593905	Cluster_5821	Pocillopora_meandrina_HIv1___Sc0000022	591923	593905	1983	4579	1486	0.21445730508844726	.	UUACGAAAUAUCUGAUGGCUGAUC	205	74	3873	35	28	136	433	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:595321-596514	Cluster_5822	Pocillopora_meandrina_HIv1___Sc0000022	595321	596514	1194	3158	922	0.7485750474984167	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	494	43	2872	5	120	53	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:601615-602445	Cluster_5823	Pocillopora_meandrina_HIv1___Sc0000022	601615	602445	831	1336	615	0.8585329341317365	+	UGCGUCUCUUCUAGGGCGGAAAUCCUGA	52	58	1150	22	16	34	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:602632-605304	Cluster_5824	Pocillopora_meandrina_HIv1___Sc0000022	602632	605304	2673	5024	1742	0.9090366242038217	+	UGUUUGUUGGUAGUUCUGGAUGAUUUCC	323	92	4629	29	41	89	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:612083-612897	Cluster_5825	Pocillopora_meandrina_HIv1___Sc0000022	612083	612897	815	551	257	0.852994555353902	+	UUAUUCACAAAUAUCUCCAAAUGUUCAA	53	12	495	8	5	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:613100-614026	Cluster_5826	Pocillopora_meandrina_HIv1___Sc0000022	613100	614026	927	2679	848	0.8555431131019037	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	237	65	2429	18	24	71	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:620315-621672	Cluster_5827	Pocillopora_meandrina_HIv1___Sc0000022	620315	621672	1358	1546	644	0.6021992238033635	.	UGUACUUCUCAAUAUUAAAAACUUCACU	87	24	1292	14	19	61	136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:628313-628714	Cluster_5828	Pocillopora_meandrina_HIv1___Sc0000022	628313	628714	402	136	56	0.7794117647058824	.	UAAUUCUUAACGACUGUUCAUGUCCAUA	33	2	127	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:629958-630386	Cluster_5829	Pocillopora_meandrina_HIv1___Sc0000022	629958	630386	429	387	129	0.9638242894056848	+	UGCGACAAAGUACACCAUUUCUGA	42	1	334	0	1	3	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:635883-636302	Cluster_5830	Pocillopora_meandrina_HIv1___Sc0000022	635883	636302	420	118	57	0.03389830508474576	-	UCUUCUCGUGAUUUCCGUUUCCUUCUC	21	2	107	2	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:642188-642683	Cluster_5831	Pocillopora_meandrina_HIv1___Sc0000022	642188	642683	496	299	144	0.5016722408026756	.	AGCUUCAUGAUGAAAACACCAACAUUCUGA	16	4	267	2	2	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:670832-671258	Cluster_5832	Pocillopora_meandrina_HIv1___Sc0000022	670832	671258	427	161	87	0.968944099378882	+	UGUAGUUAUCUCUUUCUCCAAUUUUAGG	28	3	151	1	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:672154-672579	Cluster_5833	Pocillopora_meandrina_HIv1___Sc0000022	672154	672579	426	123	49	0.991869918699187	+	UAGCGAUAGAAAAUCUUAACAAUUAU	26	1	120	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:675440-675925	Cluster_5834	Pocillopora_meandrina_HIv1___Sc0000022	675440	675925	486	967	218	0.9793174767321613	+	UGUUCCAAUAUUUUUCGGUCGAGAUCCACU	208	17	889	49	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:676202-676786	Cluster_5835	Pocillopora_meandrina_HIv1___Sc0000022	676202	676786	585	2515	595	0.9550695825049702	+	UGAUAGCAACAAUGA	308	539	1864	11	12	34	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:680302-680730	Cluster_5836	Pocillopora_meandrina_HIv1___Sc0000022	680302	680730	429	259	70	0.9305019305019305	+	UUCUUUAGGUCUUGGCAUUCAUCAGCA	41	3	244	1	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:720458-721172	Cluster_5837	Pocillopora_meandrina_HIv1___Sc0000022	720458	721172	715	3745	747	0.9802403204272363	+	UGUGAUAUUCCGAACACUUGAAUGAGUCA	190	42	3512	19	24	47	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:736660-737892	Cluster_5838	Pocillopora_meandrina_HIv1___Sc0000022	736660	737892	1233	2663	648	0.9140067592940293	+	UGGGAUUACAUGUGGAAUUAUUUGACCGCU	132	54	2443	7	10	48	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:768014-768798	Cluster_5839	Pocillopora_meandrina_HIv1___Sc0000022	768014	768798	785	1425	404	0.8863157894736842	+	UGCUGUCUAGUUCCGACUAUCAUAAACUC	68	28	1318	1	6	15	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:775919-776448	Cluster_5840	Pocillopora_meandrina_HIv1___Sc0000022	775919	776448	530	3118	260	0.03624118024374599	-	UGUGACAGCUCUUUUCCUCCUGCAAAGA	654	44	2430	459	39	50	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:776499-776938	Cluster_5841	Pocillopora_meandrina_HIv1___Sc0000022	776499	776938	440	1259	241	0.014297061159650517	-	UACUGAACUUCUUCCAACCAGUGGAGAGA	254	17	1202	4	10	3	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:788297-788726	Cluster_5842	Pocillopora_meandrina_HIv1___Sc0000022	788297	788726	430	273	41	1.0	+	UGCAUUUCUAAUUCUGGUUUCGGUUACUCC	134	1	272	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:813610-814041	Cluster_5843	Pocillopora_meandrina_HIv1___Sc0000022	813610	814041	432	20663	255	0.0025165755214634853	-	UAACUUCAACUAGAUCGAAAUGCUCGUGA	14777	10	20570	1	3	4	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:836778-837202	Cluster_5844	Pocillopora_meandrina_HIv1___Sc0000022	836778	837202	425	209	137	0.8421052631578947	+	UGGUCUGUUUGUUCAUCGGUGAACUUAC	12	2	190	2	4	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:837285-837710	Cluster_5845	Pocillopora_meandrina_HIv1___Sc0000022	837285	837710	426	328	203	0.9573170731707317	+	UCAGACACGUGGAUACUUGCGAUGAAGU	16	4	307	1	1	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:838065-838480	Cluster_5846	Pocillopora_meandrina_HIv1___Sc0000022	838065	838480	416	222	120	0.9324324324324325	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	13	2	207	2	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:839221-839648	Cluster_5847	Pocillopora_meandrina_HIv1___Sc0000022	839221	839648	428	189	58	0.6772486772486772	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	31	2	142	0	2	2	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:844611-845312	Cluster_5848	Pocillopora_meandrina_HIv1___Sc0000022	844611	845312	702	270	132	0.937037037037037	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	30	3	256	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:846542-846970	Cluster_5849	Pocillopora_meandrina_HIv1___Sc0000022	846542	846970	429	265	151	0.8603773584905661	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	29	4	243	1	2	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:879816-880281	Cluster_5850	Pocillopora_meandrina_HIv1___Sc0000022	879816	880281	466	339	163	0.17994100294985252	-	CGCGAUCUUCGGUUGCCUGA	17	239	32	43	13	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:978644-979058	Cluster_5851	Pocillopora_meandrina_HIv1___Sc0000022	978644	979058	415	319	18	1.0	+	GCCGCGAUAGCUCAA	166	319	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1101425-1101852	Cluster_5852	Pocillopora_meandrina_HIv1___Sc0000022	1101425	1101852	428	167	56	0.11377245508982035	-	UGUAAUAAUCGUUUUGGGUAAUCUCAACA	56	3	151	1	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1103330-1103759	Cluster_5853	Pocillopora_meandrina_HIv1___Sc0000022	1103330	1103759	430	850	153	0.9564705882352941	+	UAGUAUAACUUUGAUCUGAUGAAAAUCAUC	291	3	827	2	1	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1339659-1340085	Cluster_5854	Pocillopora_meandrina_HIv1___Sc0000022	1339659	1340085	427	156	26	0.9807692307692307	+	UGUUGAACAAUCGUGUACGGUGUGGGA	82	0	153	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1443644-1444314	Cluster_5855	Pocillopora_meandrina_HIv1___Sc0000022	1443644	1444314	671	418	136	0.9521531100478469	+	AAAGAUCUGAAUUGACAAAUAGUGUACAGU	98	11	350	2	1	16	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1490221-1490638	Cluster_5856	Pocillopora_meandrina_HIv1___Sc0000022	1490221	1490638	418	281	192	0.99644128113879	+	GAGCUAUUGAAAUUUUGACGAAAU	11	66	130	17	26	16	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1491419-1491833	Cluster_5857	Pocillopora_meandrina_HIv1___Sc0000022	1491419	1491833	415	94	16	0.0425531914893617	-	GUUGGAUCCGGCCCACA	54	85	9	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1654973-1655388	Cluster_5858	Pocillopora_meandrina_HIv1___Sc0000022	1654973	1655388	416	353	6	0.0	-	UUCCGAGGUCGCGGUG	340	353	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1757056-1757483	Cluster_5859	Pocillopora_meandrina_HIv1___Sc0000022	1757056	1757483	428	150	59	0.9733333333333334	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	54	1	143	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1877336-1878073	Cluster_5860	Pocillopora_meandrina_HIv1___Sc0000022	1877336	1878073	738	814	311	0.03562653562653563	-	UCCGUGACACAACGACUUUGCCUUGCUU	101	5	792	1	3	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1878243-1878691	Cluster_5861	Pocillopora_meandrina_HIv1___Sc0000022	1878243	1878691	449	448	203	0.17857142857142858	-	UAUGACGUUCCAGAAUCUUUGACAAAA	45	3	427	5	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1879214-1879642	Cluster_5862	Pocillopora_meandrina_HIv1___Sc0000022	1879214	1879642	429	138	50	0.0	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	21	1	135	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1973582-1973996	Cluster_5863	Pocillopora_meandrina_HIv1___Sc0000022	1973582	1973996	415	103	23	0.06796116504854369	-	GAAGGAAUCGGCCGA	72	100	0	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2039814-2040242	Cluster_5864	Pocillopora_meandrina_HIv1___Sc0000022	2039814	2040242	429	304	58	0.7927631578947368	.	UGAUAUCAUAUUCUCUGUUUCCUCAUC	114	19	236	9	7	27	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2304232-2304647	Cluster_5865	Pocillopora_meandrina_HIv1___Sc0000022	2304232	2304647	416	102	12	0.0	-	GGGUAACUUUGGUGGA	70	102	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2722541-2722950	Cluster_5866	Pocillopora_meandrina_HIv1___Sc0000022	2722541	2722950	410	83	33	0.04819277108433735	-	UGAACUUGAACUAUUUGCUGGAGACGAAAGU	14	1	78	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2724250-2724677	Cluster_5867	Pocillopora_meandrina_HIv1___Sc0000022	2724250	2724677	428	202	82	0.01485148514851485	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	32	8	189	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2864952-2865381	Cluster_5868	Pocillopora_meandrina_HIv1___Sc0000022	2864952	2865381	430	367	116	0.01907356948228883	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	47	0	362	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2866527-2867222	Cluster_5869	Pocillopora_meandrina_HIv1___Sc0000022	2866527	2867222	696	253	119	0.45454545454545453	.	UCCGAAAAAUGUCAACAGAGAACUGCUUG	27	2	244	5	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2931954-2932373	Cluster_5870	Pocillopora_meandrina_HIv1___Sc0000022	2931954	2932373	420	216	56	0.027777777777777776	-	CUCUGUCUCUGUCCGUGUCU	37	183	12	5	7	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2937470-2937899	Cluster_5871	Pocillopora_meandrina_HIv1___Sc0000022	2937470	2937899	430	153	47	0.9934640522875817	+	ACAUAUACCGGGUAUUUCUAAACACUGCUU	30	7	135	1	6	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3074527-3074941	Cluster_5872	Pocillopora_meandrina_HIv1___Sc0000022	3074527	3074941	415	88	14	0.0	-	GAUGGAUGGAGACGG	29	87	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3392153-3392705	Cluster_5873	Pocillopora_meandrina_HIv1___Sc0000022	3392153	3392705	553	593	407	0.0	-	GAAGGAGUUCGGUGGAGCUGUAGACA	9	195	223	40	61	39	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3440864-3441278	Cluster_5874	Pocillopora_meandrina_HIv1___Sc0000022	3440864	3441278	415	158	14	0.9493670886075949	+	CCGUGUUGUAGGCUC	118	153	3	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3645061-3645476	Cluster_5875	Pocillopora_meandrina_HIv1___Sc0000022	3645061	3645476	416	208	17	0.014423076923076924	-	AGUGUGUUCUUAACU	95	206	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3774038-3774452	Cluster_5876	Pocillopora_meandrina_HIv1___Sc0000022	3774038	3774452	415	98	12	1.0	+	GCUUGGGCUGCCGGGGC	59	97	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4088218-4088633	Cluster_5877	Pocillopora_meandrina_HIv1___Sc0000022	4088218	4088633	416	518	41	1.0	+	ACUGCUGCCGGUCGUC	385	499	15	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4120057-4120460	Cluster_5878	Pocillopora_meandrina_HIv1___Sc0000022	4120057	4120460	404	93	44	0.24731182795698925	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	19	6	66	3	8	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4272758-4273191	Cluster_5879	Pocillopora_meandrina_HIv1___Sc0000022	4272758	4273191	434	417	64	0.002398081534772182	-	UGAUUUGUGACUGCUGUUGUUGCAUGGC	170	5	409	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4274315-4274899	Cluster_5880	Pocillopora_meandrina_HIv1___Sc0000022	4274315	4274899	585	600	243	0.7233333333333334	.	UCAAAAUCUUCGUAAUUCUGGUAAGGA	42	9	534	8	5	21	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4311659-4312085	Cluster_5881	Pocillopora_meandrina_HIv1___Sc0000022	4311659	4312085	427	90	28	0.9222222222222223	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	54	0	85	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4315335-4315931	Cluster_5882	Pocillopora_meandrina_HIv1___Sc0000022	4315335	4315931	597	5699	504	0.0024565713283032113	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	873	13	5636	4	14	7	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4334556-4334977	Cluster_5883	Pocillopora_meandrina_HIv1___Sc0000022	4334556	4334977	422	211	19	0.990521327014218	+	UCUGACGAAGGGCUGACGCUCA	170	5	1	8	183	10	4	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4355422-4355839	Cluster_5884	Pocillopora_meandrina_HIv1___Sc0000022	4355422	4355839	418	109	11	0.0	-	CGGCUUGAAAAAAAAAAAA	34	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4404045-4404461	Cluster_5885	Pocillopora_meandrina_HIv1___Sc0000022	4404045	4404461	417	1083	11	0.0	-	AAGUGUGCUCUUAACUA	1051	1083	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4451644-4452060	Cluster_5886	Pocillopora_meandrina_HIv1___Sc0000022	4451644	4452060	417	423	12	0.002364066193853428	-	GAGUGCGCUCUUAACUA	292	423	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4496866-4497284	Cluster_5887	Pocillopora_meandrina_HIv1___Sc0000022	4496866	4497284	419	836	12	0.9988038277511961	+	AUGGACUAUGAUUUUUU	270	836	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4641549-4641974	Cluster_5888	Pocillopora_meandrina_HIv1___Sc0000022	4641549	4641974	426	111	38	0.990990990990991	+	UGUGUAGAUAUGUCUUUUGGACAGGA	32	1	110	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4679819-4680359	Cluster_5889	Pocillopora_meandrina_HIv1___Sc0000022	4679819	4680359	541	479	162	0.4697286012526096	.	AUGAGAUUCAUGAAUGGAGACAACC	45	5	424	3	13	2	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4681239-4681674	Cluster_5890	Pocillopora_meandrina_HIv1___Sc0000022	4681239	4681674	436	486	103	1.0	+	UGUAAGACUGACAAAGGCUAAGGUGAACAGC	110	4	458	3	3	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4694361-4694777	Cluster_5891	Pocillopora_meandrina_HIv1___Sc0000022	4694361	4694777	417	90	23	1.0	+	UCCCACUCCUGACACCA	23	90	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4773435-4774094	Cluster_5892	Pocillopora_meandrina_HIv1___Sc0000022	4773435	4774094	660	629	122	0.9491255961844197	+	AUGGGUCUUAUUGAGCAUUACAGA	99	6	467	0	6	13	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4809610-4810026	Cluster_5893	Pocillopora_meandrina_HIv1___Sc0000022	4809610	4810026	417	123	16	0.959349593495935	+	GACGGAUUGAGGAAGCA	92	114	7	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4949269-4950131	Cluster_5894	Pocillopora_meandrina_HIv1___Sc0000022	4949269	4950131	863	723	336	0.3582295988934993	.	UGCUGUAUCAUCUGAAAACAAAGAAUGC	34	8	628	15	11	18	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4995172-4995791	Cluster_5895	Pocillopora_meandrina_HIv1___Sc0000022	4995172	4995791	620	20854	2822	0.0009590486237652249	-	CCUCUGAGCGCGAAGCACGUUGCC	1244	6327	6424	1618	2367	1670	2448	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5033872-5034408	Cluster_5896	Pocillopora_meandrina_HIv1___Sc0000022	5033872	5034408	537	1088	332	1.0	+	CAGUUCUGUGACAGUC	70	414	404	114	61	69	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5073836-5074251	Cluster_5897	Pocillopora_meandrina_HIv1___Sc0000022	5073836	5074251	416	144	9	0.9861111111111112	+	GAGUGUGCUCUUAGCC	95	143	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5113155-5113580	Cluster_5898	Pocillopora_meandrina_HIv1___Sc0000022	5113155	5113580	426	108	47	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	30	1	104	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5232770-5233198	Cluster_5899	Pocillopora_meandrina_HIv1___Sc0000022	5232770	5233198	429	103	30	0.9611650485436893	+	AACUGAAGAACCGAUCUCUAAAAUUGAUU	44	1	98	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5310368-5310789	Cluster_5900	Pocillopora_meandrina_HIv1___Sc0000022	5310368	5310789	422	170	16	1.0	+	UCUGACGAAGGGCUGACGCUCA	136	10	0	6	147	7	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5319075-5319519	Cluster_5901	Pocillopora_meandrina_HIv1___Sc0000022	5319075	5319519	445	168	67	0.9642857142857143	+	UCGAUGUUACUGUCCGUUCUCCGUUGA	39	3	158	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5625640-5626072	Cluster_5902	Pocillopora_meandrina_HIv1___Sc0000022	5625640	5626072	433	333	106	0.978978978978979	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	40	12	303	1	5	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5637573-5637993	Cluster_5903	Pocillopora_meandrina_HIv1___Sc0000022	5637573	5637993	421	231	29	0.0	-	GUGAUAGAUCUUUUGGAGACGA	49	165	0	16	49	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5787456-5787885	Cluster_5904	Pocillopora_meandrina_HIv1___Sc0000022	5787456	5787885	430	623	131	0.9951845906902087	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	131	2	612	0	2	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5788006-5788535	Cluster_5905	Pocillopora_meandrina_HIv1___Sc0000022	5788006	5788535	530	572	235	0.9912587412587412	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	29	2	558	3	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5790680-5791105	Cluster_5906	Pocillopora_meandrina_HIv1___Sc0000022	5790680	5791105	426	135	72	0.9851851851851852	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	21	0	131	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5984962-5985377	Cluster_5907	Pocillopora_meandrina_HIv1___Sc0000022	5984962	5985377	416	682	12	0.011730205278592375	-	CGGCUUGAAAAAAAAA	481	676	4	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:6057719-6058222	Cluster_5908	Pocillopora_meandrina_HIv1___Sc0000022	6057719	6058222	504	2026	417	0.0004935834155972359	-	GAAGGAUGAUGACCUAAAAGGCC	182	394	486	134	352	483	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:6110320-6110734	Cluster_5909	Pocillopora_meandrina_HIv1___Sc0000022	6110320	6110734	415	76	6	0.9736842105263158	+	CUUUCCGGGGUCGCG	65	75	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3659-5396	Cluster_5910	Pocillopora_meandrina_HIv1___Sc0000023	3659	5396	1738	2690	1096	0.04312267657992565	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	87	35	2537	11	19	47	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:132586-133142	Cluster_5911	Pocillopora_meandrina_HIv1___Sc0000023	132586	133142	557	537	202	0.0	-	GAAUUUUGCAGGCUCAUACAACU	45	129	235	30	45	69	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:134704-135255	Cluster_5912	Pocillopora_meandrina_HIv1___Sc0000023	134704	135255	552	1907	434	0.001048767697954903	-	GCUUACUGCCAGACUACAGAC	201	618	673	343	94	117	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:288293-288718	Cluster_5913	Pocillopora_meandrina_HIv1___Sc0000023	288293	288718	426	144	42	0.9861111111111112	+	UUUGACUGUAUUUUUUAUUCCUA	36	3	98	2	1	40	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:542562-542976	Cluster_5914	Pocillopora_meandrina_HIv1___Sc0000023	542562	542976	415	116	5	0.0	-	UCAGGGAUUGUGGUA	110	116	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:613556-613981	Cluster_5915	Pocillopora_meandrina_HIv1___Sc0000023	613556	613981	426	119	52	0.01680672268907563	-	ACGAUCACGUCGAACUGUAUGGCAGCUAGC	18	3	111	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:622107-622907	Cluster_5916	Pocillopora_meandrina_HIv1___Sc0000023	622107	622907	801	718	265	0.26740947075208915	.	AAAAGUAACAAGUAUUGGGGAUUCAAUC	52	9	631	11	2	19	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:662021-662449	Cluster_5917	Pocillopora_meandrina_HIv1___Sc0000023	662021	662449	429	269	96	0.27137546468401486	.	UAGGACAAUUAGCAUUACAGCAGCUUA	28	0	246	4	5	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:663916-664317	Cluster_5918	Pocillopora_meandrina_HIv1___Sc0000023	663916	664317	402	179	96	0.8715083798882681	+	UAUCGAGUACUUACGGCGAAGGAGGCCA	12	3	166	1	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:723792-724221	Cluster_5919	Pocillopora_meandrina_HIv1___Sc0000023	723792	724221	430	148	36	0.9864864864864865	+	UGUUAAUCGAGAGAAGCAUAGACGCAAAUC	61	0	148	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:754024-754453	Cluster_5920	Pocillopora_meandrina_HIv1___Sc0000023	754024	754453	430	308	47	1.0	+	UUCCAUGACUCUGUUUAAACGAAAACGAAC	178	1	306	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:757105-757624	Cluster_5921	Pocillopora_meandrina_HIv1___Sc0000023	757105	757624	520	4704	306	0.9965986394557823	+	UGUUAUUUGUGUCUAAUGUUGUCGAACAC	927	17	4645	7	9	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:757806-758231	Cluster_5922	Pocillopora_meandrina_HIv1___Sc0000023	757806	758231	426	186	101	0.16666666666666666	-	UGAGGAAUCGAGAUGGCUAGCUGUGUU	24	29	130	1	7	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:758300-758730	Cluster_5923	Pocillopora_meandrina_HIv1___Sc0000023	758300	758730	431	628	55	0.009554140127388535	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	230	0	627	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:765065-766077	Cluster_5924	Pocillopora_meandrina_HIv1___Sc0000023	765065	766077	1013	2882	420	0.9628730048577376	+	UCGGAUCUUUCACCUCAUGAGCAGCGAGA	855	14	2819	3	1	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:938847-939262	Cluster_5925	Pocillopora_meandrina_HIv1___Sc0000023	938847	939262	416	105	10	1.0	+	CAAGUGUGCUCUUAACUA	25	104	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1061848-1062274	Cluster_5926	Pocillopora_meandrina_HIv1___Sc0000023	1061848	1062274	427	200	20	0.975	+	UGGUAAAAUUCUGUUCAAAGUAGGUGC	170	4	194	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1084399-1084813	Cluster_5927	Pocillopora_meandrina_HIv1___Sc0000023	1084399	1084813	415	78	11	1.0	+	CAAGUGUGCUCUUAACUA	24	78	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1539199-1539697	Cluster_5928	Pocillopora_meandrina_HIv1___Sc0000023	1539199	1539697	499	384	201	0.020833333333333332	-	AAGACAACGACACAUUUGUGCAUUC	36	92	167	37	16	26	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1594033-1594461	Cluster_5929	Pocillopora_meandrina_HIv1___Sc0000023	1594033	1594461	429	91	19	0.0	-	CUCAUGUACAGCAGAACUUGUUGAAUCUG	53	3	86	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1635912-1636355	Cluster_5930	Pocillopora_meandrina_HIv1___Sc0000023	1635912	1636355	444	1009	182	1.0	+	UUCCUCUCUGAGCUUACCACAGUCAUGUGAU	218	188	600	75	16	67	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1636538-1636961	Cluster_5931	Pocillopora_meandrina_HIv1___Sc0000023	1636538	1636961	424	129	66	0.9457364341085271	+	AUGUGGAUUAUUUGGUUUAUGAUA	23	14	59	8	5	15	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1648832-1649372	Cluster_5932	Pocillopora_meandrina_HIv1___Sc0000023	1648832	1649372	541	3769	896	0.9997346776333245	+	ACCCAAAGUGUCAAAUUCCUGGAUA	393	729	1879	516	174	215	256	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1653651-1654082	Cluster_5933	Pocillopora_meandrina_HIv1___Sc0000023	1653651	1654082	432	505	155	1.0	+	ACUAUGUUGAUAUUAGGACGGCAUGAGGUUG	64	196	253	9	12	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1661773-1662196	Cluster_5934	Pocillopora_meandrina_HIv1___Sc0000023	1661773	1662196	424	131	63	1.0	+	AUGUGGAUUAUUUGGUUUAUGAUA	17	10	69	3	11	14	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1887616-1888048	Cluster_5935	Pocillopora_meandrina_HIv1___Sc0000023	1887616	1888048	433	195	74	0.0	-	AACGUGUCACUUGCGAAGAAAUCUGAAGU	23	2	190	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1889295-1889722	Cluster_5936	Pocillopora_meandrina_HIv1___Sc0000023	1889295	1889722	428	187	68	0.9946524064171123	+	UGAACCGUGCCGAUCUGCUGCCCUUUGAC	37	0	184	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2039299-2039724	Cluster_5937	Pocillopora_meandrina_HIv1___Sc0000023	2039299	2039724	426	92	40	0.03260869565217391	-	UGUGUAGAUAUGUCUUUUGGACAGGA	26	0	91	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2092559-2092986	Cluster_5938	Pocillopora_meandrina_HIv1___Sc0000023	2092559	2092986	428	118	29	0.05084745762711865	-	UCUACAUAAUCUCUUUCUGCAUCACUGAAG	51	7	110	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2332953-2333368	Cluster_5939	Pocillopora_meandrina_HIv1___Sc0000023	2332953	2333368	416	96	7	0.010416666666666666	-	GUAGGCUGCUGUGAGC	72	96	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2508727-2509156	Cluster_5940	Pocillopora_meandrina_HIv1___Sc0000023	2508727	2509156	430	132	31	0.007575757575757576	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	53	1	131	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2562485-2562913	Cluster_5941	Pocillopora_meandrina_HIv1___Sc0000023	2562485	2562913	429	139	57	1.0	+	UGCUUCUAACUCGGGCUGUCUGCCACAGUGG	29	3	134	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2586871-2587290	Cluster_5942	Pocillopora_meandrina_HIv1___Sc0000023	2586871	2587290	420	1285	34	1.0	+	CUUUCUGGAGUUAAGGAU	490	1280	0	5	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2620429-2620844	Cluster_5943	Pocillopora_meandrina_HIv1___Sc0000023	2620429	2620844	416	91	12	0.0	-	GAUUUGGAUGGAGCUU	32	91	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2665435-2666773	Cluster_5944	Pocillopora_meandrina_HIv1___Sc0000023	2665435	2666773	1339	3107	259	0.993241068554876	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	1691	16	3052	5	6	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2666913-2667321	Cluster_5945	Pocillopora_meandrina_HIv1___Sc0000023	2666913	2667321	409	103	53	0.5145631067961165	.	CAGUUGUCAACUGGAGUAGGGCA	8	0	67	0	0	24	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2667925-2668655	Cluster_5946	Pocillopora_meandrina_HIv1___Sc0000023	2667925	2668655	731	353	121	0.43909348441926344	.	CUUGUCUUCGAUCGACAGAGUCAUGUAGU	25	28	251	15	8	13	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2752938-2754130	Cluster_5947	Pocillopora_meandrina_HIv1___Sc0000023	2752938	2754130	1193	3150	878	0.23809523809523808	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	472	38	2858	17	113	57	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2755547-2757529	Cluster_5948	Pocillopora_meandrina_HIv1___Sc0000023	2755547	2757529	1983	4839	1528	0.7726803058483158	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	243	78	4079	29	34	145	474	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2850001-2850429	Cluster_5949	Pocillopora_meandrina_HIv1___Sc0000023	2850001	2850429	429	165	40	0.9696969696969697	+	UGCUUUAGUCACAGACUUUGCACCUGAAA	62	7	156	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2851851-2852313	Cluster_5950	Pocillopora_meandrina_HIv1___Sc0000023	2851851	2852313	463	391	126	0.7723785166240409	.	UUUAUGCGGUCUUUGAUGCCGAGAAGUCUGC	69	19	350	1	5	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3040453-3040893	Cluster_5951	Pocillopora_meandrina_HIv1___Sc0000023	3040453	3040893	441	1617	104	0.8806431663574521	+	UGAAUCCGCUUUGCAGCAUAAAUGAGC	953	10	1410	11	3	17	166	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3042931-3043511	Cluster_5952	Pocillopora_meandrina_HIv1___Sc0000023	3042931	3043511	581	254	114	0.8858267716535433	+	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCA	29	6	235	2	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3062446-3062972	Cluster_5953	Pocillopora_meandrina_HIv1___Sc0000023	3062446	3062972	527	4848	484	0.929042904290429	+	UAUGUUGAACGAGAACUGAGGACCUCGAUC	758	35	4623	8	21	90	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3120578-3121006	Cluster_5954	Pocillopora_meandrina_HIv1___Sc0000023	3120578	3121006	429	1330	89	0.9992481203007518	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	884	2	1322	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3121387-3121812	Cluster_5955	Pocillopora_meandrina_HIv1___Sc0000023	3121387	3121812	426	173	65	0.37572254335260113	.	UCUGCAUGAAGAACAGACCACCUGAUGA	17	2	163	1	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3123006-3123575	Cluster_5956	Pocillopora_meandrina_HIv1___Sc0000023	3123006	3123575	570	1172	207	0.8626279863481229	+	UGAUAAGCUCAGAUCGCUCGAUGUCAGU	273	15	1115	9	7	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3142922-3143504	Cluster_5957	Pocillopora_meandrina_HIv1___Sc0000023	3142922	3143504	583	1774	350	0.7034949267192785	.	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCA	197	20	1626	13	11	23	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3160642-3161066	Cluster_5958	Pocillopora_meandrina_HIv1___Sc0000023	3160642	3161066	425	182	82	0.8791208791208791	+	UGAUGCCGAGAAGUCUGCUCUCCUGAGU	23	0	177	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3235979-3236405	Cluster_5959	Pocillopora_meandrina_HIv1___Sc0000023	3235979	3236405	427	119	44	0.865546218487395	+	UGCUUUAGUCACAGACUUUGCACCUGAAA	29	4	110	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3237033-3237463	Cluster_5960	Pocillopora_meandrina_HIv1___Sc0000023	3237033	3237463	431	700	201	0.9785714285714285	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	165	2	683	3	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3237511-3237937	Cluster_5961	Pocillopora_meandrina_HIv1___Sc0000023	3237511	3237937	427	362	180	0.9585635359116023	+	UGUUGGAACUUUGCGGAAGAAAAGGGCU	19	20	314	2	2	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3239517-3239945	Cluster_5962	Pocillopora_meandrina_HIv1___Sc0000023	3239517	3239945	429	213	85	0.9295774647887324	+	UACAGACUUAUCAAUCUCGAGGUGAAGC	30	3	190	0	0	15	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3240038-3240459	Cluster_5963	Pocillopora_meandrina_HIv1___Sc0000023	3240038	3240459	422	261	157	0.9195402298850575	+	UAAACUCCUGAACAUCUUGUUCUACAUU	20	1	250	2	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3240562-3240979	Cluster_5964	Pocillopora_meandrina_HIv1___Sc0000023	3240562	3240979	418	275	166	0.8436363636363636	+	UGACUCACCGACCUCCUGUACUCUCUGA	11	14	229	6	2	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3309346-3309773	Cluster_5965	Pocillopora_meandrina_HIv1___Sc0000023	3309346	3309773	428	272	135	0.5514705882352942	.	UGCAUUCUUUGUGGCGUACGUUCUGCUU	32	8	254	1	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3394591-3395020	Cluster_5966	Pocillopora_meandrina_HIv1___Sc0000023	3394591	3395020	430	228	49	0.013157894736842105	-	GCUUGGUUGAUAUUUGUACAAAAUUGAAAUA	60	3	220	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3409026-3409442	Cluster_5967	Pocillopora_meandrina_HIv1___Sc0000023	3409026	3409442	417	148	77	0.033783783783783786	-	UUGGACGUAGAUGUUUGUUUACAUCGGG	17	0	143	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3409792-3410217	Cluster_5968	Pocillopora_meandrina_HIv1___Sc0000023	3409792	3410217	426	140	61	0.05714285714285714	-	UGUUUACUUUCUUUACAACUUCGGAUACGGG	22	0	137	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3436895-3437312	Cluster_5969	Pocillopora_meandrina_HIv1___Sc0000023	3436895	3437312	418	210	3	1.0	+	UGGCCUGAAAAAAAAAAA	163	210	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3471903-3472332	Cluster_5970	Pocillopora_meandrina_HIv1___Sc0000023	3471903	3472332	430	300	88	0.6533333333333333	.	UGAAGUAAGCACCCUGGUCUCUGCCAAG	71	3	284	0	3	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3700809-3701236	Cluster_5971	Pocillopora_meandrina_HIv1___Sc0000023	3700809	3701236	428	197	81	0.1218274111675127	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	46	3	178	2	4	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3723474-3723972	Cluster_5972	Pocillopora_meandrina_HIv1___Sc0000023	3723474	3723972	499	4592	343	0.9932491289198606	+	UGCUUCUCGAUUCACAUUUUCAUUCUGC	1086	21	4536	7	7	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3791717-3792146	Cluster_5973	Pocillopora_meandrina_HIv1___Sc0000023	3791717	3792146	430	281	110	0.15302491103202848	-	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	29	15	246	3	3	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3830315-3830719	Cluster_5974	Pocillopora_meandrina_HIv1___Sc0000023	3830315	3830719	405	140	57	0.8571428571428571	+	UGAAAAACUGUGACCA	51	106	7	16	7	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3933279-3934530	Cluster_5975	Pocillopora_meandrina_HIv1___Sc0000023	3933279	3934530	1252	1004	465	0.6344621513944223	.	UUGGAUUGUAAUAAGGUACAAGAGGCUG	40	18	794	10	17	100	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3936607-3937027	Cluster_5976	Pocillopora_meandrina_HIv1___Sc0000023	3936607	3937027	421	175	70	0.07428571428571429	-	UCAGUGAUCAUGGAAAUUUCG	20	7	95	28	2	41	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3938983-3939424	Cluster_5977	Pocillopora_meandrina_HIv1___Sc0000023	3938983	3939424	442	221	59	0.19457013574660634	-	CAAUUGUUGAUAAAGAGAGGCUAA	36	0	166	1	8	8	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3939486-3939910	Cluster_5978	Pocillopora_meandrina_HIv1___Sc0000023	3939486	3939910	425	183	53	0.01639344262295082	-	UGCCGUGGAAAGGUUAAUCUCGAGG	41	5	123	0	15	10	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4040027-4040445	Cluster_5979	Pocillopora_meandrina_HIv1___Sc0000023	4040027	4040445	419	212	95	0.8113207547169812	+	UGUAAGACGCACUCUACUCUGUUGU	35	25	165	2	9	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4040697-4041185	Cluster_5980	Pocillopora_meandrina_HIv1___Sc0000023	4040697	4041185	489	1868	155	0.14025695931477516	-	UUAACUCCACGGUGCCAAUGACUUUCUU	451	27	1763	6	7	31	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4042477-4042969	Cluster_5981	Pocillopora_meandrina_HIv1___Sc0000023	4042477	4042969	493	297	131	0.898989898989899	+	UUGGAACGUGUUGCUGAACGCUUGCUA	33	21	248	3	6	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4071653-4072074	Cluster_5982	Pocillopora_meandrina_HIv1___Sc0000023	4071653	4072074	422	99	46	0.9595959595959596	+	UGAUUACACUGUCAAAAAUUCCUGCGA	20	4	89	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4152717-4153133	Cluster_5983	Pocillopora_meandrina_HIv1___Sc0000023	4152717	4153133	417	289	16	1.0	+	UCCCUGCUGCUGUAUGU	81	286	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4326953-4327367	Cluster_5984	Pocillopora_meandrina_HIv1___Sc0000023	4326953	4327367	415	318	15	0.0031446540880503146	-	GGUUGGAUCCGGCCG	293	318	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4466900-4467330	Cluster_5985	Pocillopora_meandrina_HIv1___Sc0000023	4466900	4467330	431	673	74	0.0014858841010401188	-	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	227	0	669	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4579510-4579936	Cluster_5986	Pocillopora_meandrina_HIv1___Sc0000023	4579510	4579936	427	93	39	0.03225806451612903	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	33	0	91	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4681114-4681542	Cluster_5987	Pocillopora_meandrina_HIv1___Sc0000023	4681114	4681542	429	216	45	1.0	+	CGCGGAAAGAGGGGAAAUUGCACUCUCCC	34	18	168	3	3	1	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4714493-4714932	Cluster_5988	Pocillopora_meandrina_HIv1___Sc0000023	4714493	4714932	440	307	152	0.990228013029316	+	AGAUUGAACCACCCAUAGGCUGAUA	23	75	176	16	8	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4716503-4716988	Cluster_5989	Pocillopora_meandrina_HIv1___Sc0000023	4716503	4716988	486	825	274	0.9975757575757576	+	AGAAAUGAUGACAGAAU	75	390	338	32	22	13	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4794386-4794809	Cluster_5990	Pocillopora_meandrina_HIv1___Sc0000023	4794386	4794809	424	25910	211	3.8595137012736394e-05	-	UGUCUGUGAGAAUUUAGCUCGU	13246	2201	24	288	21114	2018	265	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4966723-4967139	Cluster_5991	Pocillopora_meandrina_HIv1___Sc0000023	4966723	4967139	417	149	13	0.013422818791946308	-	AUGCAAGUCGAACGGUA	66	147	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5048164-5048594	Cluster_5992	Pocillopora_meandrina_HIv1___Sc0000023	5048164	5048594	431	422	127	0.9170616113744076	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	110	12	384	2	3	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5049201-5049601	Cluster_5993	Pocillopora_meandrina_HIv1___Sc0000023	5049201	5049601	401	192	117	0.90625	+	UGGAAAUACUUAAAGGAGAUAAGACGUU	16	3	171	3	3	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5063417-5063846	Cluster_5994	Pocillopora_meandrina_HIv1___Sc0000023	5063417	5063846	430	185	57	0.005405405405405406	-	UGUUAAUCGAGAGAAGCAUAGACGCAAAUC	57	1	178	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5256083-5256502	Cluster_5995	Pocillopora_meandrina_HIv1___Sc0000023	5256083	5256502	420	217	19	1.0	+	AUUGUGGUUUUGAUCUUUUU	72	192	0	24	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5493397-5493824	Cluster_5996	Pocillopora_meandrina_HIv1___Sc0000023	5493397	5493824	428	188	57	1.0	+	UCUUGAAGCCUUGUCAGCCGGUCUGCCU	24	13	173	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5719271-5720758	Cluster_5997	Pocillopora_meandrina_HIv1___Sc0000023	5719271	5720758	1488	7969	1912	0.2192244949178065	.	UGCAGUGAAUGGAGAGAUCUGACAUCAGUC	701	145	6845	54	49	282	594	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5720774-5721819	Cluster_5998	Pocillopora_meandrina_HIv1___Sc0000023	5720774	5721819	1046	2557	754	0.057489245209229566	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	279	61	2388	16	23	31	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5721886-5722294	Cluster_5999	Pocillopora_meandrina_HIv1___Sc0000023	5721886	5722294	409	116	70	0.034482758620689655	-	UUGUUAGAAACUGUUUCAAUGAAAUA	10	2	103	2	4	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:147469-147898	Cluster_6000	Pocillopora_meandrina_HIv1___Sc0000024	147469	147898	430	1194	19	0.9958123953098827	+	UGUGAUGUAGAUUGCAACAUUUCGACUGC	517	1	1182	3	6	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:210383-212120	Cluster_6001	Pocillopora_meandrina_HIv1___Sc0000024	210383	212120	1738	2508	1057	0.05382775119617225	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	97	22	2368	6	22	53	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:467348-467772	Cluster_6002	Pocillopora_meandrina_HIv1___Sc0000024	467348	467772	425	91	34	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	24	0	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:704431-704953	Cluster_6003	Pocillopora_meandrina_HIv1___Sc0000024	704431	704953	523	1493	344	0.07769591426657736	-	UCCUCGCUAAGAAUUCUUAUUUCGUCG	180	16	1376	19	27	24	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:705080-706057	Cluster_6004	Pocillopora_meandrina_HIv1___Sc0000024	705080	706057	978	1068	401	0.7050561797752809	.	UAACUUCUUGGCUGAUUUAAAAUUUAUGUC	59	6	1007	4	5	19	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:776195-776622	Cluster_6005	Pocillopora_meandrina_HIv1___Sc0000024	776195	776622	428	166	60	1.0	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	25	4	158	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:778552-778962	Cluster_6006	Pocillopora_meandrina_HIv1___Sc0000024	778552	778962	411	138	73	0.8188405797101449	+	UGGUUAUGUAAAUGAGGUUUCCUGUGAAGG	22	0	130	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:956651-957078	Cluster_6007	Pocillopora_meandrina_HIv1___Sc0000024	956651	957078	428	139	37	0.014388489208633094	-	UGCUCAAUGUCCAGGACUCUCUCUGAGU	31	0	135	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1007371-1007818	Cluster_6008	Pocillopora_meandrina_HIv1___Sc0000024	1007371	1007818	448	444	107	0.5720720720720721	.	AUAGCUCGAACGAGGACUCGUCCUUAACA	83	3	380	6	3	9	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1008128-1008555	Cluster_6009	Pocillopora_meandrina_HIv1___Sc0000024	1008128	1008555	428	186	34	0.0	-	UGGUAAACUUCCCUAACAUUGGCCUGUG	39	0	184	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1010264-1010698	Cluster_6010	Pocillopora_meandrina_HIv1___Sc0000024	1010264	1010698	435	4465	290	0.006494960806270996	-	UUGUUUACCUCUUGUCGUCUCUUAGUUUG	937	41	4364	3	19	30	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1010709-1011221	Cluster_6011	Pocillopora_meandrina_HIv1___Sc0000024	1010709	1011221	513	955	292	0.08691099476439791	-	UUCUUCUUUGGCCUCUCUGAGUCUGAGC	99	12	906	2	5	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1094342-1094767	Cluster_6012	Pocillopora_meandrina_HIv1___Sc0000024	1094342	1094767	426	93	21	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	40	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1592893-1595069	Cluster_6013	Pocillopora_meandrina_HIv1___Sc0000024	1592893	1595069	2177	1839	783	0.9630233822729745	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	107	27	1735	11	8	33	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1596077-1597121	Cluster_6014	Pocillopora_meandrina_HIv1___Sc0000024	1596077	1597121	1045	869	378	0.956271576524741	+	UAACAUCUCUCUUUCCGACUUUAACAGC	43	9	818	5	6	15	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1597181-1597684	Cluster_6015	Pocillopora_meandrina_HIv1___Sc0000024	1597181	1597684	504	550	205	0.9509090909090909	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	103	2	526	3	1	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1597714-1598248	Cluster_6016	Pocillopora_meandrina_HIv1___Sc0000024	1597714	1598248	535	722	307	0.9210526315789473	+	UGUGAACCGAAUUUCUGUGAUCGCUCCAGUU	29	9	679	4	1	7	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1598368-1598852	Cluster_6017	Pocillopora_meandrina_HIv1___Sc0000024	1598368	1598852	485	468	277	0.8354700854700855	+	UGUUCCGGUACAAAUUUUCCCUGCAUA	17	4	418	0	3	7	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1737905-1738332	Cluster_6018	Pocillopora_meandrina_HIv1___Sc0000024	1737905	1738332	428	119	11	0.01680672268907563	-	UAACCCGAGAACUGACACGUGAGUAGUC	67	24	83	0	0	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1742428-1742854	Cluster_6019	Pocillopora_meandrina_HIv1___Sc0000024	1742428	1742854	427	95	13	0.010526315789473684	-	UAACCCGAGAACUGACACGUGAGUAGUC	62	1	84	0	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1971890-1972315	Cluster_6020	Pocillopora_meandrina_HIv1___Sc0000024	1971890	1972315	426	194	66	0.9742268041237113	+	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	30	3	180	3	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1972818-1973250	Cluster_6021	Pocillopora_meandrina_HIv1___Sc0000024	1972818	1973250	433	673	173	0.8841010401188707	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	103	1	649	0	11	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1975327-1975861	Cluster_6022	Pocillopora_meandrina_HIv1___Sc0000024	1975327	1975861	535	641	135	0.9765990639625585	+	UCAGACUGUGCAUAACCAUUUGCAAACG	86	4	594	0	11	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1988581-1989093	Cluster_6023	Pocillopora_meandrina_HIv1___Sc0000024	1988581	1989093	513	3028	185	0.9243725231175693	+	UUGUCUAGUAUUGACCUUGUGACUUGUGC	1417	14	2996	5	4	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2043031-2044270	Cluster_6024	Pocillopora_meandrina_HIv1___Sc0000024	2043031	2044270	1240	5564	1193	0.19410496046010065	-	UUACAUGAUUUUUAUAGGAGCUGAAUAA	368	65	5072	12	27	75	313	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2122924-2124411	Cluster_6025	Pocillopora_meandrina_HIv1___Sc0000024	2122924	2124411	1488	10473	2100	0.05327986250358063	-	UCGACGAUCUUAAAAUCCUUUCCUUCUU	750	181	9793	57	48	164	230	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2126407-2126823	Cluster_6026	Pocillopora_meandrina_HIv1___Sc0000024	2126407	2126823	417	141	15	0.9929078014184397	+	UAGUGUGCUCUUAACGG	70	141	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2257156-2257583	Cluster_6027	Pocillopora_meandrina_HIv1___Sc0000024	2257156	2257583	428	194	71	0.010309278350515464	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	33	2	185	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2388554-2388980	Cluster_6028	Pocillopora_meandrina_HIv1___Sc0000024	2388554	2388980	427	109	23	0.9724770642201835	+	UGAACUACUGCUCGUACUCUAGAUAUG	36	4	105	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2467312-2467738	Cluster_6029	Pocillopora_meandrina_HIv1___Sc0000024	2467312	2467738	427	165	86	0.07272727272727272	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	19	1	157	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2584993-2585605	Cluster_6030	Pocillopora_meandrina_HIv1___Sc0000024	2584993	2585605	613	864	146	0.04398148148148148	-	UGGUAAAAUUCUGUUCAAAGUAGGUGU	154	2	780	60	3	1	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2627559-2627975	Cluster_6031	Pocillopora_meandrina_HIv1___Sc0000024	2627559	2627975	417	104	22	0.9903846153846154	+	AUCCCACUUCUGACACCA	35	97	6	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2629691-2630637	Cluster_6032	Pocillopora_meandrina_HIv1___Sc0000024	2629691	2630637	947	745	202	0.08053691275167785	-	UGUGACAGCUCUUUUCCUCCUGCAAAGAAG	81	26	683	15	2	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2645965-2646399	Cluster_6033	Pocillopora_meandrina_HIv1___Sc0000024	2645965	2646399	435	267	98	0.7153558052434457	.	UCUGACCAAUUAAUUAUUUUCUGUACCACA	51	4	195	1	2	19	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2695971-2697393	Cluster_6034	Pocillopora_meandrina_HIv1___Sc0000024	2695971	2697393	1423	14914	2744	0.7372938178892315	.	UCUUGGUACUGAAUUUGUUUAUCGGCGU	556	160	13574	93	118	411	558	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2852508-2853971	Cluster_6035	Pocillopora_meandrina_HIv1___Sc0000024	2852508	2853971	1464	10733	1224	0.09475449548122612	-	UGCAGAUUGCCCUGACACGAAAUAUCGUC	1932	122	9691	251	166	237	266	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2854893-2855297	Cluster_6036	Pocillopora_meandrina_HIv1___Sc0000024	2854893	2855297	405	194	116	0.14432989690721648	-	UACUUCUAACAGCGUUUCUUUUAGCUCU	11	5	174	1	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2856088-2856516	Cluster_6037	Pocillopora_meandrina_HIv1___Sc0000024	2856088	2856516	429	458	115	0.008733624454148471	-	UGUAGAAUCAAUCUGUUACUAAGACACC	123	5	428	13	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2868577-2869002	Cluster_6038	Pocillopora_meandrina_HIv1___Sc0000024	2868577	2869002	426	241	100	0.27800829875518673	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	29	10	217	0	4	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2869813-2870498	Cluster_6039	Pocillopora_meandrina_HIv1___Sc0000024	2869813	2870498	686	414	237	0.21980676328502416	.	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	29	0	352	4	7	15	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2872254-2872681	Cluster_6040	Pocillopora_meandrina_HIv1___Sc0000024	2872254	2872681	428	199	81	0.07035175879396985	-	UAUACACGUUUAGGAUCUUCAUUUUUGA	81	0	192	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2879631-2880057	Cluster_6041	Pocillopora_meandrina_HIv1___Sc0000024	2879631	2880057	427	164	51	0.17073170731707318	-	UGUCAAAUUCUCGUCUUCCUAACCUUU	63	1	161	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2882444-2882853	Cluster_6042	Pocillopora_meandrina_HIv1___Sc0000024	2882444	2882853	410	93	40	0.3548387096774194	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	18	3	90	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2886028-2886445	Cluster_6043	Pocillopora_meandrina_HIv1___Sc0000024	2886028	2886445	418	169	71	0.01775147928994083	-	UGUUCUCUAGAUGUUGCUGACACUUGUC	18	0	162	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2888072-2888500	Cluster_6044	Pocillopora_meandrina_HIv1___Sc0000024	2888072	2888500	429	168	33	0.011904761904761904	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	81	1	166	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2888791-2889209	Cluster_6045	Pocillopora_meandrina_HIv1___Sc0000024	2888791	2889209	419	139	60	0.0	-	UCUAUCCCACCUGUAAUGAAAAAAUCUUUGU	19	0	136	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2889642-2890085	Cluster_6046	Pocillopora_meandrina_HIv1___Sc0000024	2889642	2890085	444	800	155	0.02	-	UGUGAAACUCUGGAACUCAACAAUUCC	182	16	749	16	3	12	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2893475-2894396	Cluster_6047	Pocillopora_meandrina_HIv1___Sc0000024	2893475	2894396	922	2073	449	0.1278340569223348	-	UGUGAAUUUUUGGAUCAUUGGUUGUGUU	157	24	1975	7	12	13	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2894481-2894908	Cluster_6048	Pocillopora_meandrina_HIv1___Sc0000024	2894481	2894908	428	380	121	0.12894736842105264	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	82	4	352	6	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2904527-2905081	Cluster_6049	Pocillopora_meandrina_HIv1___Sc0000024	2904527	2905081	555	495	151	0.6525252525252525	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	58	0	458	6	6	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2909494-2911794	Cluster_6050	Pocillopora_meandrina_HIv1___Sc0000024	2909494	2911794	2301	13868	2624	0.10946062878569368	-	UUAUAUGUUUCUCUAAUUCUGCACGAGU	857	206	12901	88	76	174	423	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2912380-2914326	Cluster_6051	Pocillopora_meandrina_HIv1___Sc0000024	2912380	2914326	1947	4078	1274	0.9345267287886219	+	UGAUCUUGUAACAAUUUCCCUGUCAGA	418	56	3883	20	16	36	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2919104-2919605	Cluster_6052	Pocillopora_meandrina_HIv1___Sc0000024	2919104	2919605	502	491	245	0.35234215885947046	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	32	13	444	1	3	5	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2921056-2921472	Cluster_6053	Pocillopora_meandrina_HIv1___Sc0000024	2921056	2921472	417	120	51	0.008333333333333333	-	UGACUAACCAUGACCAAGACUGAUCAUAUU	47	3	116	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2923270-2924756	Cluster_6054	Pocillopora_meandrina_HIv1___Sc0000024	2923270	2924756	1487	129607	3309	0.0003780659995216308	-	UGCGUUUCUGGUAGACUUAUGUUUUGAAA	24880	2380	122475	712	911	1327	1802	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2925030-2926622	Cluster_6055	Pocillopora_meandrina_HIv1___Sc0000024	2925030	2926622	1593	1657	658	0.0	-	UCGGUAUUUUCUGCAAGAAACAGCAAGAGA	78	33	1579	11	10	8	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2927287-2927864	Cluster_6056	Pocillopora_meandrina_HIv1___Sc0000024	2927287	2927864	578	585	232	0.017094017094017096	-	UCCCGGUAAUCACUCAAAGAAUAAUGAGA	68	8	557	4	5	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2928128-2928571	Cluster_6057	Pocillopora_meandrina_HIv1___Sc0000024	2928128	2928571	444	2787	256	0.002152852529601722	-	UUAAGAUUAAUUGAUAGGAGAAGUAAAUU	1236	31	2704	16	3	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2928771-2929204	Cluster_6058	Pocillopora_meandrina_HIv1___Sc0000024	2928771	2929204	434	286	152	0.05244755244755245	-	UGACUAAUGAAUAUGAAAGACGGAUGCGGGU	15	12	264	4	1	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2929950-2930654	Cluster_6059	Pocillopora_meandrina_HIv1___Sc0000024	2929950	2930654	705	577	272	0.03466204506065858	-	UGAUUUUAGCAGACUGGGUGGCUCCUA	58	34	525	0	6	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2930984-2931761	Cluster_6060	Pocillopora_meandrina_HIv1___Sc0000024	2930984	2931761	778	463	201	0.004319654427645789	-	UACAACCUUGACCGUUUUACCUCUGAAUAGU	32	21	427	2	5	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2932916-2934246	Cluster_6061	Pocillopora_meandrina_HIv1___Sc0000024	2932916	2934246	1331	33275	1889	0.00027047332832456797	-	UGUGGAUAAUUUAAUAACUGCAGUAAGGAUG	2425	438	29178	348	250	2551	510	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2935134-2936135	Cluster_6062	Pocillopora_meandrina_HIv1___Sc0000024	2935134	2936135	1002	79398	1562	0.00025189551374090027	-	UCAGACUCACUGAAGGUACCGCUUGAAGUA	22565	214	78903	49	63	76	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2938496-2938922	Cluster_6063	Pocillopora_meandrina_HIv1___Sc0000024	2938496	2938922	427	114	21	0.0	-	CUCUGCUGACUGCAGGACCUUCCUUGC	74	0	112	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2939249-2939713	Cluster_6064	Pocillopora_meandrina_HIv1___Sc0000024	2939249	2939713	465	5518	288	0.0003624501631025734	-	UAGACUGUUUCCGCCCGUUGUAUGUGUAC	1219	22	5473	4	6	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2939960-2940388	Cluster_6065	Pocillopora_meandrina_HIv1___Sc0000024	2939960	2940388	429	135	45	0.007407407407407408	-	UUGGACUUUGAACCGCAGACCAUGCUGUU	21	7	128	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2940581-2941092	Cluster_6066	Pocillopora_meandrina_HIv1___Sc0000024	2940581	2941092	512	474	203	0.0	-	UCAGGUCUGUCUUCCUCUGCUACAAGC	25	6	453	2	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2943422-2943998	Cluster_6067	Pocillopora_meandrina_HIv1___Sc0000024	2943422	2943998	577	313	125	0.003194888178913738	-	UGUUUGACUGCACAAUUCCUUACUGCACA	39	5	296	2	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2944853-2946315	Cluster_6068	Pocillopora_meandrina_HIv1___Sc0000024	2944853	2946315	1463	5957	1067	0.004532482793352359	-	UCUUUGUUUACCCCAGUUCUGUUUAACU	506	73	5703	13	26	54	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2946412-2947090	Cluster_6069	Pocillopora_meandrina_HIv1___Sc0000024	2946412	2947090	679	2917	607	0.002056907781967775	-	UGUGUCUUUGCCAGUGUGCAACUCUGUGCUC	182	32	2822	7	8	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2947621-2948036	Cluster_6070	Pocillopora_meandrina_HIv1___Sc0000024	2947621	2948036	416	95	53	0.010526315789473684	-	UGAUAUUUUAACUUUCAUUUUAGUAGUGC	9	2	85	0	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2948127-2948556	Cluster_6071	Pocillopora_meandrina_HIv1___Sc0000024	2948127	2948556	430	256	99	0.0	-	AAAGAGCUGAUUUGUUAUUGAAGGUUAAC	26	4	249	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2949354-2950434	Cluster_6072	Pocillopora_meandrina_HIv1___Sc0000024	2949354	2950434	1081	2269	391	0.01851035698545615	-	AGGUAUAGGUUACUCAAGAUUAAUUGAU	232	39	2130	24	5	13	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2951229-2951636	Cluster_6073	Pocillopora_meandrina_HIv1___Sc0000024	2951229	2951636	408	166	102	0.018072289156626505	-	UUGGCGUGGAGUCUCUUCCCUGUUCUCUGC	11	9	151	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2951811-2952697	Cluster_6074	Pocillopora_meandrina_HIv1___Sc0000024	2951811	2952697	887	919	321	0.004352557127312296	-	UGGUUCACUUCUUUAGCACACACAUCAAGA	89	28	865	4	3	13	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2953525-2955247	Cluster_6075	Pocillopora_meandrina_HIv1___Sc0000024	2953525	2955247	1723	15339	1442	0.0005215463850316188	-	UGAUUAAGCUCCUCUAGUUCUCGGCAGC	2355	355	14221	55	165	385	158	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2955586-2956354	Cluster_6076	Pocillopora_meandrina_HIv1___Sc0000024	2955586	2956354	769	1023	399	0.005865102639296188	-	UAAGACAAAUGGGGCUUAUGGCAAUGACC	120	24	976	4	8	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2956923-2957505	Cluster_6077	Pocillopora_meandrina_HIv1___Sc0000024	2956923	2957505	583	462	212	0.0021645021645021645	-	UGUGAUUUGUUAUUACCUAUGGUGGGAUU	28	12	437	0	4	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2957673-2959749	Cluster_6078	Pocillopora_meandrina_HIv1___Sc0000024	2957673	2959749	2077	4335	1279	0.002306805074971165	-	AGCAGCAAAUCACACUACGUGCACUCAAC	686	77	4146	11	29	34	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2961623-2962054	Cluster_6079	Pocillopora_meandrina_HIv1___Sc0000024	2961623	2962054	432	580	107	0.0034482758620689655	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	207	5	570	3	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2962808-2963480	Cluster_6080	Pocillopora_meandrina_HIv1___Sc0000024	2962808	2963480	673	2128	636	0.12922932330827067	-	UGUGCGUGUUUUCACUGCGGCGACUGUCGC	228	63	1769	22	23	65	186	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2964138-2964604	Cluster_6081	Pocillopora_meandrina_HIv1___Sc0000024	2964138	2964604	467	419	241	0.00477326968973747	-	UGUGCGUUUCCCCUGCAGAGGACUUUGU	18	14	392	1	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3011473-3011900	Cluster_6082	Pocillopora_meandrina_HIv1___Sc0000024	3011473	3011900	428	161	30	0.9627329192546584	+	UAGGAAAUAAAAAACGGAGAAGCAAUUA	43	1	149	5	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3012456-3012891	Cluster_6083	Pocillopora_meandrina_HIv1___Sc0000024	3012456	3012891	436	349	163	0.034383954154727794	-	UGAAUUCUGCCAGAAUCUCUUCGUCUGUC	24	2	330	9	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3026184-3026614	Cluster_6084	Pocillopora_meandrina_HIv1___Sc0000024	3026184	3026614	431	272	11	0.003676470588235294	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	259	1	270	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3128967-3129382	Cluster_6085	Pocillopora_meandrina_HIv1___Sc0000024	3128967	3129382	416	108	10	0.9907407407407407	+	GCUGGGAUUUUGCACC	71	108	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3322378-3322792	Cluster_6086	Pocillopora_meandrina_HIv1___Sc0000024	3322378	3322792	415	139	6	1.0	+	UGGCUGGCUAGGCGG	75	139	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3340389-3340814	Cluster_6087	Pocillopora_meandrina_HIv1___Sc0000024	3340389	3340814	426	2626	131	0.0015232292460015233	-	UCUCUCAUUGCUUUGCACGAAUUAG	1212	50	2218	13	17	316	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3341706-3342134	Cluster_6088	Pocillopora_meandrina_HIv1___Sc0000024	3341706	3342134	429	529	33	0.005671077504725898	-	UGAACUCUUGAACAGUCAUGUGUG	236	13	106	6	150	18	236	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3344845-3345260	Cluster_6089	Pocillopora_meandrina_HIv1___Sc0000024	3344845	3345260	416	204	8	0.004901960784313725	-	GCUGGAUGAUGAGACC	186	204	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3418565-3419986	Cluster_6090	Pocillopora_meandrina_HIv1___Sc0000024	3418565	3419986	1422	2106	769	0.9976258309591642	+	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	145	31	2032	2	13	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3420037-3421305	Cluster_6091	Pocillopora_meandrina_HIv1___Sc0000024	3420037	3421305	1269	7607	1215	0.9681871960036809	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1526	80	7228	19	70	93	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3513701-3514145	Cluster_6092	Pocillopora_meandrina_HIv1___Sc0000024	3513701	3514145	445	370	289	0.08648648648648649	-	GAAGAGACAAGGUCGCACUCUGUACGGCUU	7	148	148	29	18	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3537929-3538343	Cluster_6093	Pocillopora_meandrina_HIv1___Sc0000024	3537929	3538343	415	81	24	1.0	+	CAGCUGGUGCUCAGUUAGGUUAGU	39	5	5	9	1	5	56	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3627744-3628216	Cluster_6094	Pocillopora_meandrina_HIv1___Sc0000024	3627744	3628216	473	2677	199	0.9555472543892417	+	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	1408	5	2653	1	5	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3838751-3839209	Cluster_6095	Pocillopora_meandrina_HIv1___Sc0000024	3838751	3839209	459	458	145	0.8100436681222707	+	UAGUCGACUGAAUUGCUCCGUGUAAGAGG	44	17	403	3	2	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3842999-3843422	Cluster_6096	Pocillopora_meandrina_HIv1___Sc0000024	3842999	3843422	424	147	80	0.891156462585034	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	22	2	137	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3896813-3898219	Cluster_6097	Pocillopora_meandrina_HIv1___Sc0000024	3896813	3898219	1407	5098	631	0.016673205178501373	-	UAUGAUCUUACAAGAACUGAACUGUGUA	845	3	5032	2	5	21	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3979358-3979772	Cluster_6098	Pocillopora_meandrina_HIv1___Sc0000024	3979358	3979772	415	99	7	1.0	+	UGCAACUCUGGAACA	38	99	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4039267-4039915	Cluster_6099	Pocillopora_meandrina_HIv1___Sc0000024	4039267	4039915	649	546	236	0.7252747252747253	.	UUUGCAGGAAAUGUGAUUUAAAAGGAAAUGU	38	7	503	0	1	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4056716-4057308	Cluster_6100	Pocillopora_meandrina_HIv1___Sc0000024	4056716	4057308	593	5322	562	0.6811349116873356	.	UCGACAUCGUCAAUGCACUCUUUGCGCG	391	106	4016	69	21	95	1015	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4058901-4059349	Cluster_6101	Pocillopora_meandrina_HIv1___Sc0000024	4058901	4059349	449	1615	228	0.9795665634674923	+	UGAAUGCUGGUAUCUUGAUAGUAGAACA	281	5	1569	3	3	31	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4083653-4086648	Cluster_6102	Pocillopora_meandrina_HIv1___Sc0000024	4083653	4086648	2996	20766	3517	0.10391986901666185	-	UGAUUUCCACUGAUCGGCUGUGAAGCCCC	1093	229	18689	87	203	431	1127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4093656-4094411	Cluster_6103	Pocillopora_meandrina_HIv1___Sc0000024	4093656	4094411	756	6631	683	0.5617553913436887	.	CCUCUUCUUAUUGGGAUGUGUACUCUUUC	1297	45	6313	23	35	91	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4106585-4107398	Cluster_6104	Pocillopora_meandrina_HIv1___Sc0000024	4106585	4107398	814	401	217	0.9027431421446384	+	UGAUUUUGGAAUGUUGUUUACGUUGUG	20	1	374	2	2	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4127709-4128274	Cluster_6105	Pocillopora_meandrina_HIv1___Sc0000024	4127709	4128274	566	701	199	0.9415121255349501	+	UGAUUAGAAUCGGGAACAACCA	164	13	494	5	167	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4161863-4162401	Cluster_6106	Pocillopora_meandrina_HIv1___Sc0000024	4161863	4162401	539	1403	337	0.08054169636493229	-	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	253	17	1281	8	13	15	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4163089-4163523	Cluster_6107	Pocillopora_meandrina_HIv1___Sc0000024	4163089	4163523	435	214	86	0.0794392523364486	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	37	0	197	0	1	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4164811-4165229	Cluster_6108	Pocillopora_meandrina_HIv1___Sc0000024	4164811	4165229	419	163	99	0.12883435582822086	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	19	1	149	1	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4165578-4166007	Cluster_6109	Pocillopora_meandrina_HIv1___Sc0000024	4165578	4166007	430	627	186	0.006379585326953748	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	145	3	611	1	6	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4201910-4202459	Cluster_6110	Pocillopora_meandrina_HIv1___Sc0000024	4201910	4202459	550	636	174	0.007861635220125786	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	84	0	621	0	0	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4207685-4208168	Cluster_6111	Pocillopora_meandrina_HIv1___Sc0000024	4207685	4208168	484	508	175	0.84251968503937	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	127	3	497	4	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4208466-4208893	Cluster_6112	Pocillopora_meandrina_HIv1___Sc0000024	4208466	4208893	428	150	42	0.9466666666666667	+	UGGAAUUCGAAGCAAGUAACAAUGGACA	37	4	136	4	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4211041-4211469	Cluster_6113	Pocillopora_meandrina_HIv1___Sc0000024	4211041	4211469	429	303	56	0.013201320132013201	-	UAGGACAACUGAGAAUCCACGUAGACUC	113	0	293	0	8	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4386996-4387398	Cluster_6114	Pocillopora_meandrina_HIv1___Sc0000024	4386996	4387398	403	101	57	0.15841584158415842	-	AAAGAAUGCAUCGGUCAUGUGCAGAAGAG	8	1	95	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4413137-4413552	Cluster_6115	Pocillopora_meandrina_HIv1___Sc0000024	4413137	4413552	416	245	17	0.9959183673469387	+	GACGGAGCUUGGAGCC	88	245	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4472787-4473204	Cluster_6116	Pocillopora_meandrina_HIv1___Sc0000024	4472787	4473204	418	137	14	0.0072992700729927005	-	GAAGUUCUGGUUUAAAAA	96	133	2	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4490178-4490607	Cluster_6117	Pocillopora_meandrina_HIv1___Sc0000024	4490178	4490607	430	228	100	0.9956140350877193	+	UACAAUGAAUACUGUUCCAGAAUUAAGGGC	52	3	217	2	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4543520-4543968	Cluster_6118	Pocillopora_meandrina_HIv1___Sc0000024	4543520	4543968	449	2045	230	0.03227383863080684	-	CGAUCCAACAAGAACAAUAUGUGCAGACU	414	24	1873	6	33	25	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4629024-4629867	Cluster_6119	Pocillopora_meandrina_HIv1___Sc0000024	4629024	4629867	844	1856	1068	0.9983836206896551	+	AAUGGCUCUGGUAUGUG	17	852	595	128	101	90	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4630626-4631871	Cluster_6120	Pocillopora_meandrina_HIv1___Sc0000024	4630626	4631871	1246	4565	2575	0.9984665936473165	+	ACCGACUACUUGAUGAAGAUCUUGAC	37	1536	1691	321	386	302	329	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4692842-4693265	Cluster_6121	Pocillopora_meandrina_HIv1___Sc0000024	4692842	4693265	424	96	32	0.0	-	AAAGGAAUUAGGACUCUGGGAUCG	14	5	51	0	4	8	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4699114-4699771	Cluster_6122	Pocillopora_meandrina_HIv1___Sc0000024	4699114	4699771	658	2954	275	0.9333107650643195	+	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	549	3	2897	10	6	5	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4706038-4706444	Cluster_6123	Pocillopora_meandrina_HIv1___Sc0000024	4706038	4706444	407	95	59	0.0	-	CUUGAGACGAGGAGCUUUUGUGCA	10	31	32	4	3	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4808666-4808760	Cluster_6124	Pocillopora_meandrina_HIv1___Sc0000024	4808666	4808760	95	3172	172	0.9996847414880202	+	AGAACCCAAGAAUCUCGA	871	2846	1	297	24	3	1	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000024:4882058-4882462	Cluster_6125	Pocillopora_meandrina_HIv1___Sc0000024	4882058	4882462	405	174	131	0.8908045977011494	+	CUACGAUCUUCUGAA	17	59	63	12	14	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4920463-4920900	Cluster_6126	Pocillopora_meandrina_HIv1___Sc0000024	4920463	4920900	438	324	150	0.6728395061728395	.	UACUGCAUUUUGGAAAGCUUCGGCUCA	29	17	272	6	0	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4986862-4987297	Cluster_6127	Pocillopora_meandrina_HIv1___Sc0000024	4986862	4987297	436	399	100	0.9373433583959899	+	UAAGAAAUCUUCCACUGAUCGUUGAGUUGA	48	6	369	4	3	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5009879-5010307	Cluster_6128	Pocillopora_meandrina_HIv1___Sc0000024	5009879	5010307	429	175	92	0.09142857142857143	-	UAAUGAACGUAUAGCCAUCCAGUUGAACU	15	3	169	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5010321-5010736	Cluster_6129	Pocillopora_meandrina_HIv1___Sc0000024	5010321	5010736	416	133	85	0.21804511278195488	.	UAACACUAUAAACAUUCUGAGGGCGAUU	7	3	113	3	5	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5029510-5029936	Cluster_6130	Pocillopora_meandrina_HIv1___Sc0000024	5029510	5029936	427	122	47	0.9590163934426229	+	UGAUCCAACAAGAACAAUAUGUGCUGA	34	1	113	0	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5042981-5043407	Cluster_6131	Pocillopora_meandrina_HIv1___Sc0000024	5042981	5043407	427	173	71	0.7572254335260116	.	UAGGAUAUAUCACUUGCGUAAUUUACA	34	15	141	7	4	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5153233-5153738	Cluster_6132	Pocillopora_meandrina_HIv1___Sc0000024	5153233	5153738	506	555	248	0.2954954954954955	.	UGUUCUCGGUUAUCAGCUCAGAAAUGCA	24	24	458	7	7	12	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5154717-5155141	Cluster_6133	Pocillopora_meandrina_HIv1___Sc0000024	5154717	5155141	425	94	31	0.02127659574468085	-	UGUGUAGAUAUGUCUUUUGGACAGGA	30	0	92	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5201310-5201725	Cluster_6134	Pocillopora_meandrina_HIv1___Sc0000024	5201310	5201725	416	100	8	0.99	+	GGCCGUGAUCGUAUAA	87	100	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5206554-5207098	Cluster_6135	Pocillopora_meandrina_HIv1___Sc0000024	5206554	5207098	545	2510	374	0.99800796812749	+	UAGCAUUGUCGGUAUCUGCAGCU	629	266	583	55	121	1398	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5274612-5275041	Cluster_6136	Pocillopora_meandrina_HIv1___Sc0000024	5274612	5275041	430	306	65	0.8986928104575164	+	UUCUGGUUAUCUUGCGAGAAUUUUGUCACC	85	12	278	7	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:52013-52437	Cluster_6137	Pocillopora_meandrina_HIv1___Sc0000025	52013	52437	425	165	53	0.12121212121212122	-	UACUGAACUGGCUAGGAUUUGUGCA	21	27	120	0	0	0	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:52666-53245	Cluster_6138	Pocillopora_meandrina_HIv1___Sc0000025	52666	53245	580	358	163	0.25139664804469275	.	UGAACGAUCCAUUUCAGCCACGGCUAAAGUA	17	7	331	1	4	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:57453-62607	Cluster_6139	Pocillopora_meandrina_HIv1___Sc0000025	57453	62607	5155	26112	5619	0.09286917892156862	-	UGUAUUGUUGAAUCUUCUGGUUUGUCGA	1253	571	23951	182	260	411	737	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:65003-65609	Cluster_6140	Pocillopora_meandrina_HIv1___Sc0000025	65003	65609	607	217	67	0.11059907834101383	-	UCGUCUCACGGGCUGCCAAGCGAUGCGG	43	6	182	3	5	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:65671-66099	Cluster_6141	Pocillopora_meandrina_HIv1___Sc0000025	65671	66099	429	220	45	0.004545454545454545	-	UUGGUCAUAAAGCACAUGAAGAACCGC	55	3	216	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:81390-81833	Cluster_6142	Pocillopora_meandrina_HIv1___Sc0000025	81390	81833	444	888	187	0.21171171171171171	.	UCCAGAUCGUUAAGAAAUAUAUUGAACA	227	8	770	7	8	26	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:85045-85466	Cluster_6143	Pocillopora_meandrina_HIv1___Sc0000025	85045	85466	422	123	46	0.024390243902439025	-	UCAAAACCUUGUUGGCUGUAUUCUCUCAUC	33	2	117	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:120662-121091	Cluster_6144	Pocillopora_meandrina_HIv1___Sc0000025	120662	121091	430	1112	177	0.006294964028776978	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	252	1	1092	4	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:132328-132754	Cluster_6145	Pocillopora_meandrina_HIv1___Sc0000025	132328	132754	427	179	68	0.0335195530726257	-	UGCCUCUUAUAAAACAUAUCGUUAUGCUGUA	58	10	165	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:133277-133808	Cluster_6146	Pocillopora_meandrina_HIv1___Sc0000025	133277	133808	532	1297	364	0.01233616037008481	-	UGAAGGAACGUGUGGCCCCUCACGAGGUA	76	9	1255	4	6	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:134251-134678	Cluster_6147	Pocillopora_meandrina_HIv1___Sc0000025	134251	134678	428	202	59	0.04455445544554455	-	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	42	0	191	0	4	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:138089-138620	Cluster_6148	Pocillopora_meandrina_HIv1___Sc0000025	138089	138620	532	497	212	0.3641851106639839	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	51	5	472	3	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:139246-140097	Cluster_6149	Pocillopora_meandrina_HIv1___Sc0000025	139246	140097	852	1274	238	0.9034536891679749	+	CGUGUACGACGCCUCUGCCCGAGCUUCAG	351	9	1226	13	3	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:141460-141886	Cluster_6150	Pocillopora_meandrina_HIv1___Sc0000025	141460	141886	427	197	99	0.2131979695431472	.	UCACGAAUCUUUGCCAUUGUGAGGCUCACU	18	10	173	1	2	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:142044-142918	Cluster_6151	Pocillopora_meandrina_HIv1___Sc0000025	142044	142918	875	665	350	0.3037593984962406	.	UACGUCUAGUAUAACCUCCUCUAACUCGG	20	20	559	8	9	35	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:151851-152280	Cluster_6152	Pocillopora_meandrina_HIv1___Sc0000025	151851	152280	430	250	35	0.008	-	UCAGAAUCAAAUUUUUAGCAGUGGGUAGAUC	62	59	190	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:152606-153036	Cluster_6153	Pocillopora_meandrina_HIv1___Sc0000025	152606	153036	431	263	16	0.011406844106463879	-	UCAGCUCCAUAUCUUGUUUAACAUCUUAAAC	179	1	261	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:153609-154122	Cluster_6154	Pocillopora_meandrina_HIv1___Sc0000025	153609	154122	514	489	65	0.0	-	UCAAAUGACUGUAGUCUCCAGUGCCAAGACU	106	5	484	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:159877-160308	Cluster_6155	Pocillopora_meandrina_HIv1___Sc0000025	159877	160308	432	2066	45	0.0	-	UCCAGAACUUUUUCACGACCCAAAUGUGGUA	1199	6	2054	2	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:174244-174676	Cluster_6156	Pocillopora_meandrina_HIv1___Sc0000025	174244	174676	433	482	75	0.01037344398340249	-	AACUACUGCUCGUGCUCUAGAUAUGACA	120	14	463	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:177572-177986	Cluster_6157	Pocillopora_meandrina_HIv1___Sc0000025	177572	177986	415	100	38	0.0	-	AAACUGUCUCAUUUCUGUGCGGAUCAUG	21	21	76	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:189065-189920	Cluster_6158	Pocillopora_meandrina_HIv1___Sc0000025	189065	189920	856	2508	648	0.05143540669856459	-	UCUUCAACAUGGACAGGCGAGUUAUCUAUC	253	45	2291	17	29	58	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:189972-190401	Cluster_6159	Pocillopora_meandrina_HIv1___Sc0000025	189972	190401	430	1070	39	0.005607476635514018	-	UCGGGCUUCUUAGCUUUCAAGUCUUUGGGA	526	2	1062	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:197269-197991	Cluster_6160	Pocillopora_meandrina_HIv1___Sc0000025	197269	197991	723	1553	241	0.017385705086928525	-	UGGAAAGUUCUCUGGUAUGCGAGUCAGC	432	20	1496	9	3	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:198924-199356	Cluster_6161	Pocillopora_meandrina_HIv1___Sc0000025	198924	199356	433	1346	158	0.0007429420505200594	-	UGUUGUGGUUUAGGCGUUCUGUAUCUCUAC	262	12	1314	3	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:200022-200444	Cluster_6162	Pocillopora_meandrina_HIv1___Sc0000025	200022	200444	423	282	89	0.0673758865248227	-	UCGGUAUAGCUUUCAAAACAGUC	94	11	155	1	1	110	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:215224-215973	Cluster_6163	Pocillopora_meandrina_HIv1___Sc0000025	215224	215973	750	2593	278	0.020439645198611647	-	UCAAUGCUUCUUGUCUGUACCAUCUGUGC	867	10	2571	1	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:309386-309814	Cluster_6164	Pocillopora_meandrina_HIv1___Sc0000025	309386	309814	429	189	51	0.0582010582010582	-	GCCCGACUAGCUCAGUCGGUAGAGCAUGA	71	9	175	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:595825-596251	Cluster_6165	Pocillopora_meandrina_HIv1___Sc0000025	595825	596251	427	261	83	0.9348659003831418	+	UGAAACUCUGAUCUGAAAAUAUUUUC	58	22	209	4	2	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:664697-665127	Cluster_6166	Pocillopora_meandrina_HIv1___Sc0000025	664697	665127	431	1847	144	0.0	-	UCACUCGUAAGUGGUCGCUCGUAAAUACGU	560	6	1784	13	10	29	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:721626-722045	Cluster_6167	Pocillopora_meandrina_HIv1___Sc0000025	721626	722045	420	185	107	0.9459459459459459	+	UCGGGCUAUGUAAACACGGA	15	131	15	21	10	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:733541-733950	Cluster_6168	Pocillopora_meandrina_HIv1___Sc0000025	733541	733950	410	176	95	0.09659090909090909	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	19	3	167	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:787805-788230	Cluster_6169	Pocillopora_meandrina_HIv1___Sc0000025	787805	788230	426	94	24	0.9893617021276596	+	ACUGGUACAAACAAGGGUCGCGUAGCCUUU	36	1	91	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:816222-816776	Cluster_6170	Pocillopora_meandrina_HIv1___Sc0000025	816222	816776	555	2726	558	0.9552457813646368	+	UAUUGUAUCUGAUGUUUUCAAUGGUGUA	388	26	2547	9	18	46	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:816830-817507	Cluster_6171	Pocillopora_meandrina_HIv1___Sc0000025	816830	817507	678	7907	546	0.9978500063235108	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2113	11	7786	5	40	32	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:884368-885553	Cluster_6172	Pocillopora_meandrina_HIv1___Sc0000025	884368	885553	1186	14142	1338	0.027294583510111724	-	UUUGUAGGCUCUAACAGUACAUUGUU	4235	292	13527	46	54	84	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:896573-897169	Cluster_6173	Pocillopora_meandrina_HIv1___Sc0000025	896573	897169	597	5523	501	0.997646206771682	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	782	14	5473	1	4	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1160970-1161596	Cluster_6174	Pocillopora_meandrina_HIv1___Sc0000025	1160970	1161596	627	775	142	0.02967741935483871	-	UCCUUUGACUGAUACUCAACUUUCGAUAUC	342	2	763	2	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1169802-1170231	Cluster_6175	Pocillopora_meandrina_HIv1___Sc0000025	1169802	1170231	430	113	20	0.0	-	ACUGGUACAAACAAGGGUCGCGUAGCCUUU	54	1	111	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1275199-1275824	Cluster_6176	Pocillopora_meandrina_HIv1___Sc0000025	1275199	1275824	626	460	103	0.034782608695652174	-	UCCUUUGACUGAUACUCAACUUUCGAUAUC	198	1	454	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1324924-1325353	Cluster_6177	Pocillopora_meandrina_HIv1___Sc0000025	1324924	1325353	430	264	67	0.030303030303030304	-	UAAGGAUCUCAAGGCGAAUAAAGCAAAG	57	8	251	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1480405-1480834	Cluster_6178	Pocillopora_meandrina_HIv1___Sc0000025	1480405	1480834	430	432	66	0.0023148148148148147	-	UAUCUGUUACGUCAUCAAAUUAUAAUGCAC	148	4	422	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1480854-1481707	Cluster_6179	Pocillopora_meandrina_HIv1___Sc0000025	1480854	1481707	854	1161	533	0.02239448751076658	-	UGAAAUUUCACUGUAGCGUUGUUGAACGUC	73	9	1109	6	4	13	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1483454-1483951	Cluster_6180	Pocillopora_meandrina_HIv1___Sc0000025	1483454	1483951	498	249	116	0.012048192771084338	-	UAUGAUACAUCUUCUUUACGUCUCCGAU	18	3	242	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1486022-1486435	Cluster_6181	Pocillopora_meandrina_HIv1___Sc0000025	1486022	1486435	414	213	126	0.018779342723004695	-	UAAUAAGCUUGGAAAGUAGUCUCGAGUCCA	10	6	203	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1486636-1487065	Cluster_6182	Pocillopora_meandrina_HIv1___Sc0000025	1486636	1487065	430	1426	140	0.005610098176718092	-	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	706	27	1234	0	1	7	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1777996-1778413	Cluster_6183	Pocillopora_meandrina_HIv1___Sc0000025	1777996	1778413	418	178	96	0.5561797752808989	.	UCUUAAAAAUGCUGCCCUCGGC	31	65	9	35	60	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2071414-2071843	Cluster_6184	Pocillopora_meandrina_HIv1___Sc0000025	2071414	2071843	430	260	88	0.9923076923076923	+	UGCCUCAAUUAUUUGUUUCCACUGUUGAUC	110	4	247	1	4	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2075374-2075803	Cluster_6185	Pocillopora_meandrina_HIv1___Sc0000025	2075374	2075803	430	307	78	1.0	+	UACGAGUACGUGGCUCAGAAUUUCCCUUGG	47	33	270	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2231869-2232297	Cluster_6186	Pocillopora_meandrina_HIv1___Sc0000025	2231869	2232297	429	88	20	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	27	1	86	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2234954-2235827	Cluster_6187	Pocillopora_meandrina_HIv1___Sc0000025	2234954	2235827	874	570	269	0.9438596491228071	+	UGAUAACUGUACUCUUGAAAUUCAUCGA	18	11	543	1	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2369398-2369822	Cluster_6188	Pocillopora_meandrina_HIv1___Sc0000025	2369398	2369822	425	309	64	1.0	+	CGCGGAAAGAGGAGAAAUUGCACU	52	27	144	4	6	2	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2646833-2647260	Cluster_6189	Pocillopora_meandrina_HIv1___Sc0000025	2646833	2647260	428	204	69	0.946078431372549	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	62	23	164	9	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2853101-2853516	Cluster_6190	Pocillopora_meandrina_HIv1___Sc0000025	2853101	2853516	416	111	7	0.9819819819819819	+	GUGUUUUUCGGUCUGC	48	111	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2908337-2908753	Cluster_6191	Pocillopora_meandrina_HIv1___Sc0000025	2908337	2908753	417	275	17	0.0036363636363636364	-	UAACGGUCCUAAGGUAG	110	275	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2974458-2974886	Cluster_6192	Pocillopora_meandrina_HIv1___Sc0000025	2974458	2974886	429	176	17	0.14772727272727273	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	131	0	174	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3200807-3201225	Cluster_6193	Pocillopora_meandrina_HIv1___Sc0000025	3200807	3201225	419	143	85	0.3006993006993007	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	11	2	115	3	5	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3255410-3255825	Cluster_6194	Pocillopora_meandrina_HIv1___Sc0000025	3255410	3255825	416	120	15	0.0	-	CGUGGAAGGUAGGUAU	37	120	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3258105-3258783	Cluster_6195	Pocillopora_meandrina_HIv1___Sc0000025	3258105	3258783	679	589	211	0.0730050933786078	-	UCAUCUCCGAGGCUGUUGUAUCAUCAAC	59	7	556	3	3	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3395192-3395616	Cluster_6196	Pocillopora_meandrina_HIv1___Sc0000025	3395192	3395616	425	103	20	0.8252427184466019	+	UGGAUUUUCCUCUACAUCGUUUGCU	78	1	100	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3421163-3421658	Cluster_6197	Pocillopora_meandrina_HIv1___Sc0000025	3421163	3421658	496	672	105	0.7916666666666666	.	UGAGAUAUGAAUUAAAAACUGAAUGUGGA	99	1	656	1	4	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3587727-3588154	Cluster_6198	Pocillopora_meandrina_HIv1___Sc0000025	3587727	3588154	428	351	86	0.9772079772079773	+	UUGUGAUGGAGGCGAUGAGCAGUG	42	15	193	3	8	18	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3682065-3682492	Cluster_6199	Pocillopora_meandrina_HIv1___Sc0000025	3682065	3682492	428	158	56	0.9746835443037974	+	UAUCAAGUAGAGAUGUCUGAGCCCGAGG	23	2	152	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3683346-3683929	Cluster_6200	Pocillopora_meandrina_HIv1___Sc0000025	3683346	3683929	584	1332	352	0.9677177177177178	+	UUUUCGGCUACUUCUGUCCAUUUUUUGGC	130	15	1293	0	2	13	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3694670-3695082	Cluster_6201	Pocillopora_meandrina_HIv1___Sc0000025	3694670	3695082	413	222	111	0.8963963963963963	+	UUAAGGAGCAGAUUUCAAGCUGAGGACGG	15	11	208	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3699216-3700043	Cluster_6202	Pocillopora_meandrina_HIv1___Sc0000025	3699216	3700043	828	633	454	0.014218009478672985	-	CACAUGACGAUCUGUACGUGAGCU	12	174	249	56	39	41	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4002468-4002889	Cluster_6203	Pocillopora_meandrina_HIv1___Sc0000025	4002468	4002889	422	91	19	0.0	-	AAGACUACAAAUUGCACAUGCC	41	6	4	8	58	15	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4039565-4039984	Cluster_6204	Pocillopora_meandrina_HIv1___Sc0000025	4039565	4039984	420	98	4	0.9897959183673469	+	GGUGGGCUGUUGGAUCUUGA	95	98	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4070277-4070818	Cluster_6205	Pocillopora_meandrina_HIv1___Sc0000025	4070277	4070818	542	490	227	0.9387755102040817	+	UGAAUUCUUCGUAAACGGUUUCCUGGUC	86	5	465	2	1	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4072251-4072662	Cluster_6206	Pocillopora_meandrina_HIv1___Sc0000025	4072251	4072662	412	222	129	0.24774774774774774	.	AAAGUCAGUAUCGUCGUGCCAAAAAUGAUG	11	7	205	3	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4077669-4078087	Cluster_6207	Pocillopora_meandrina_HIv1___Sc0000025	4077669	4078087	419	139	74	0.7050359712230215	.	UCGGUUCUUCAAUGCUACUGCUCCAACU	11	4	121	2	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4114969-4115398	Cluster_6208	Pocillopora_meandrina_HIv1___Sc0000025	4114969	4115398	430	491	113	0.23625254582484725	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	185	1	476	2	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4342566-4342989	Cluster_6209	Pocillopora_meandrina_HIv1___Sc0000025	4342566	4342989	424	99	38	0.9393939393939394	+	CGAUGGAUAAAAAGGAGAUCACGG	29	5	34	0	2	7	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4472859-4473281	Cluster_6210	Pocillopora_meandrina_HIv1___Sc0000025	4472859	4473281	423	274	33	0.021897810218978103	-	UUCGCGUCUGAAGCUGUUAGAGU	98	0	8	2	66	194	4	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4554604-4555029	Cluster_6211	Pocillopora_meandrina_HIv1___Sc0000025	4554604	4555029	426	78	13	0.01282051282051282	-	UUCAAUGUGAAAAGUUUAUUUAGGAUGA	46	0	78	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4762572-4763126	Cluster_6212	Pocillopora_meandrina_HIv1___Sc0000025	4762572	4763126	555	385	212	0.522077922077922	.	AAUACAAGCAAAGGAGUUAGAAAAUCACGA	22	3	353	3	6	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4763904-4764308	Cluster_6213	Pocillopora_meandrina_HIv1___Sc0000025	4763904	4764308	405	167	105	0.46107784431137727	.	AAUUAACGCAGCAUCCGAGAUCUUUCAGA	12	4	154	0	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4764459-4765438	Cluster_6214	Pocillopora_meandrina_HIv1___Sc0000025	4764459	4765438	980	1153	446	0.20121422376409367	.	UCCAACGUGUGCUAGGUCUACAGCUCUGC	38	10	1030	3	4	26	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4765529-4765953	Cluster_6215	Pocillopora_meandrina_HIv1___Sc0000025	4765529	4765953	425	247	115	0.17813765182186234	-	UGUGCUCAACGGUAGCGGCUCUCACGCA	17	1	226	1	3	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4766196-4766830	Cluster_6216	Pocillopora_meandrina_HIv1___Sc0000025	4766196	4766830	635	965	234	0.027979274611398965	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	117	9	941	1	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4902893-4903307	Cluster_6217	Pocillopora_meandrina_HIv1___Sc0000025	4902893	4903307	415	135	27	1.0	+	AGCGUGCUCUUAACGG	29	121	7	2	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5014489-5014908	Cluster_6218	Pocillopora_meandrina_HIv1___Sc0000025	5014489	5014908	420	1702	81	0.0	-	AUCCCACUCCUGACACCA	415	1698	0	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5091291-5091963	Cluster_6219	Pocillopora_meandrina_HIv1___Sc0000025	5091291	5091963	673	1210	345	0.5247933884297521	.	UUUCUUCGAAAACGUGGCAAUCCGUGAUA	133	40	991	13	21	19	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5092919-5093743	Cluster_6220	Pocillopora_meandrina_HIv1___Sc0000025	5092919	5093743	825	950	265	0.4631578947368421	.	UAUUUUCUUCUGGUGGUUGAUGUCCUC	127	9	899	1	6	11	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5093750-5094194	Cluster_6221	Pocillopora_meandrina_HIv1___Sc0000025	5093750	5094194	445	419	139	0.7637231503579952	.	AUUCAUGUUAGGUGGUAGAGGUGU	81	12	202	8	10	56	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5095175-5095865	Cluster_6222	Pocillopora_meandrina_HIv1___Sc0000025	5095175	5095865	691	6558	475	0.07578530039646234	-	UUCAUACGGCUUCUAGAAUUUAUCCAGU	3080	66	6158	26	26	45	237	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5098043-5098471	Cluster_6223	Pocillopora_meandrina_HIv1___Sc0000025	5098043	5098471	429	149	52	0.8859060402684564	+	AGCAAGGGCACUUUUGUAAGAGAUUUUGG	28	6	133	2	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5110648-5111424	Cluster_6224	Pocillopora_meandrina_HIv1___Sc0000025	5110648	5111424	777	271	50	0.959409594095941	+	UUGGACUGUGCAUAACCAUUUGC	116	0	125	0	7	136	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5219139-5219557	Cluster_6225	Pocillopora_meandrina_HIv1___Sc0000025	5219139	5219557	419	184	92	0.5978260869565217	.	UUCACCAUACGGACCGACCCUUU	17	73	3	38	38	27	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5246768-5247196	Cluster_6226	Pocillopora_meandrina_HIv1___Sc0000025	5246768	5247196	429	456	113	0.03289473684210526	-	UGUAGAAUCAAUCUGUUACUAAGACACC	108	2	438	8	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5293601-5294028	Cluster_6227	Pocillopora_meandrina_HIv1___Sc0000025	5293601	5294028	428	179	72	0.7486033519553073	.	UUCAUGCUCUCGUUGUUCGACUGAACGAAG	22	0	173	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5305154-5306148	Cluster_6228	Pocillopora_meandrina_HIv1___Sc0000025	5305154	5306148	995	1796	473	0.07850779510022271	-	UGAUAUUGUUGUCACAGAUACUUGAAAACA	242	27	1707	7	4	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5402913-5403340	Cluster_6229	Pocillopora_meandrina_HIv1___Sc0000025	5402913	5403340	428	205	77	0.9560975609756097	+	UGCGUGUUCUCAUUUCGGGUUGGUGAUC	24	4	196	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5405407-5405838	Cluster_6230	Pocillopora_meandrina_HIv1___Sc0000025	5405407	5405838	432	310	107	0.9225806451612903	+	UACGUGUAGAAAGCCUUCUCUGACAUC	31	3	284	3	0	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5406058-5406477	Cluster_6231	Pocillopora_meandrina_HIv1___Sc0000025	5406058	5406477	420	185	80	0.9621621621621622	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	32	2	178	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5406912-5407702	Cluster_6232	Pocillopora_meandrina_HIv1___Sc0000025	5406912	5407702	791	11966	1421	0.8808290155440415	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	1704	120	11333	13	250	103	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5608384-5608800	Cluster_6233	Pocillopora_meandrina_HIv1___Sc0000025	5608384	5608800	417	472	2	0.0	-	GAUGGAUGGAGACUGCA	470	472	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:166158-166685	Cluster_6234	Pocillopora_meandrina_HIv1___Sc0000026	166158	166685	528	282	125	0.07801418439716312	-	UCGGCAACAACUGGAGUAAAAAAUUCGGGA	33	9	252	3	1	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:282954-283847	Cluster_6235	Pocillopora_meandrina_HIv1___Sc0000026	282954	283847	894	1271	323	0.5995279307631786	.	UGAUAAGAAAGACAUAAGAAGUUUUGG	143	16	1161	14	16	16	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:288092-289261	Cluster_6236	Pocillopora_meandrina_HIv1___Sc0000026	288092	289261	1170	2492	690	0.27247191011235955	.	AUGAGCGAUAUCGCAGAACAGCUGCUGAG	216	21	2382	5	10	22	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:335002-335416	Cluster_6237	Pocillopora_meandrina_HIv1___Sc0000026	335002	335416	415	92	15	0.010869565217391304	-	UCCGGUGCGCUCUCA	60	91	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:525538-526180	Cluster_6238	Pocillopora_meandrina_HIv1___Sc0000026	525538	526180	643	1830	174	0.004918032786885246	-	UGUCAAGUAACCAAGCUUUUUCAAGACUGUU	456	6	1811	3	2	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:526212-527014	Cluster_6239	Pocillopora_meandrina_HIv1___Sc0000026	526212	527014	803	1571	298	0.2437937619350732	.	UUAGUUAACAGUCUUUUGCCCAUCACAUA	232	10	1282	22	4	43	210	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:527039-527466	Cluster_6240	Pocillopora_meandrina_HIv1___Sc0000026	527039	527466	428	383	72	0.018276762402088774	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	210	6	370	1	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:569583-569995	Cluster_6241	Pocillopora_meandrina_HIv1___Sc0000026	569583	569995	413	342	242	1.0	+	GCGCUGUGCUGAAGU	12	159	82	38	19	21	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:571893-572312	Cluster_6242	Pocillopora_meandrina_HIv1___Sc0000026	571893	572312	420	237	161	0.9957805907172996	+	UGACUGCUCAACUAGCUAUGGAAAU	11	110	68	10	24	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:573346-574087	Cluster_6243	Pocillopora_meandrina_HIv1___Sc0000026	573346	574087	742	626	434	0.9936102236421726	+	CGCUUUGCGAUUGUAGAAACUGAACGCA	10	210	265	42	46	44	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:621538-621958	Cluster_6244	Pocillopora_meandrina_HIv1___Sc0000026	621538	621958	421	341	93	0.9970674486803519	+	AAGGAGGUUUUUUGAAAAA	50	200	38	61	15	5	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:630397-630858	Cluster_6245	Pocillopora_meandrina_HIv1___Sc0000026	630397	630858	462	1435	255	0.9979094076655052	+	UUGAAAUGAUGCAGAAACAUGUUAGACU	185	110	960	21	56	234	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:632280-632716	Cluster_6246	Pocillopora_meandrina_HIv1___Sc0000026	632280	632716	437	1027	190	0.9892891918208374	+	ACCUACAAUGAGACUG	155	849	86	52	14	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:688783-689195	Cluster_6247	Pocillopora_meandrina_HIv1___Sc0000026	688783	689195	413	75	11	1.0	+	CUGUGUUGUAGGCUU	51	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:698283-699067	Cluster_6248	Pocillopora_meandrina_HIv1___Sc0000026	698283	699067	785	805	351	0.18881987577639753	-	UUUAGACUUGCAAACUUUGCUAAAAUGA	95	15	731	6	15	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:699942-700643	Cluster_6249	Pocillopora_meandrina_HIv1___Sc0000026	699942	700643	702	281	129	0.06405693950177936	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	28	2	270	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:741428-741843	Cluster_6250	Pocillopora_meandrina_HIv1___Sc0000026	741428	741843	416	355	30	0.0676056338028169	-	CCUUUCCGAGGUCGAG	124	338	9	4	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:791196-791826	Cluster_6251	Pocillopora_meandrina_HIv1___Sc0000026	791196	791826	631	1529	420	0.9692609548724657	+	UGUCGAAGAUAAGUAGCGAAGUUCUAUU	174	20	1449	23	6	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:792189-792607	Cluster_6252	Pocillopora_meandrina_HIv1___Sc0000026	792189	792607	419	169	104	0.9289940828402367	+	UAUAAUCAAACGUAAAACUGUGACGUGGGC	22	15	138	5	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:949839-950323	Cluster_6253	Pocillopora_meandrina_HIv1___Sc0000026	949839	950323	485	388	206	0.9819587628865979	+	CCUUCGAUAGCUCAGUUGGUAGAGCGGA	19	197	102	34	10	20	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:977072-977501	Cluster_6254	Pocillopora_meandrina_HIv1___Sc0000026	977072	977501	430	247	19	0.0	-	UGAAUGCUCUGCGACUGAGUGUAGGACGAG	103	5	239	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:989151-989567	Cluster_6255	Pocillopora_meandrina_HIv1___Sc0000026	989151	989567	417	207	28	1.0	+	CUUUUCGAGGUCGCG	50	200	2	3	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1128307-1128734	Cluster_6256	Pocillopora_meandrina_HIv1___Sc0000026	1128307	1128734	428	204	101	0.04411764705882353	-	UACGAUCGCUUUGACUUGACUCGCGUCACA	17	8	191	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1131534-1132189	Cluster_6257	Pocillopora_meandrina_HIv1___Sc0000026	1131534	1132189	656	693	243	0.05772005772005772	-	UAAUGACUUCAGAGUAGACAGAGACGGU	70	9	660	8	3	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1132889-1133482	Cluster_6258	Pocillopora_meandrina_HIv1___Sc0000026	1132889	1133482	594	340	181	0.22941176470588234	.	UCAGACUAGCAACAUGAUCUUCGGUGACA	17	2	307	4	2	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1133495-1133918	Cluster_6259	Pocillopora_meandrina_HIv1___Sc0000026	1133495	1133918	424	213	95	0.04225352112676056	-	UCAAAAGCUGCCGAUAAAUCUAAA	47	3	155	0	1	3	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1138806-1139366	Cluster_6260	Pocillopora_meandrina_HIv1___Sc0000026	1138806	1139366	561	382	141	0.031413612565445025	-	UCUAUUUUCUUCUCGGUGCCGAUGACGUGU	32	14	361	2	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1142826-1143245	Cluster_6261	Pocillopora_meandrina_HIv1___Sc0000026	1142826	1143245	420	175	68	0.005714285714285714	-	UGUAUCUUCGUCCGUGUUCCAUUUGACUC	27	1	165	2	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1143715-1144144	Cluster_6262	Pocillopora_meandrina_HIv1___Sc0000026	1143715	1144144	430	312	78	0.003205128205128205	-	UGAAUUCGUAGUGCUCGUCGUAGAUCAUGA	133	5	288	17	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1154719-1154813	Cluster_6263	Pocillopora_meandrina_HIv1___Sc0000026	1154719	1154813	95	23691	166	0.0	-	UAAGAUCAAGUUCAUGGUAUUCU	13847	97	52	26	598	22466	452	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000026:1240548-1240965	Cluster_6264	Pocillopora_meandrina_HIv1___Sc0000026	1240548	1240965	418	409	61	0.15158924205378974	-	CGGCCUGAAAAAAAAAA	154	351	27	12	6	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1299033-1299450	Cluster_6265	Pocillopora_meandrina_HIv1___Sc0000026	1299033	1299450	418	23323	41	0.999957123869142	+	CGGCCUGAAAAAAAAA	18232	23323	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1327345-1327760	Cluster_6266	Pocillopora_meandrina_HIv1___Sc0000026	1327345	1327760	416	227	8	0.004405286343612335	-	GCUGGAUGAUGAGACC	209	227	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1413056-1413485	Cluster_6267	Pocillopora_meandrina_HIv1___Sc0000026	1413056	1413485	430	1526	131	0.00327653997378768	-	UCUUUCGGUCACGUGGGCUUCAAACGCGU	576	5	1513	0	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1577564-1577980	Cluster_6268	Pocillopora_meandrina_HIv1___Sc0000026	1577564	1577980	417	556	29	0.9982014388489209	+	CCGUGGAAGGUAGGC	314	551	4	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1606997-1608102	Cluster_6269	Pocillopora_meandrina_HIv1___Sc0000026	1606997	1608102	1106	1285	822	0.0023346303501945525	-	CUUGACGAUUGUUUUGGGUUUCACU	28	427	505	75	85	94	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1610525-1610928	Cluster_6270	Pocillopora_meandrina_HIv1___Sc0000026	1610525	1610928	404	192	138	0.0	-	GAGGAGCAGAAUCAGACA	10	89	40	26	16	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1613405-1613814	Cluster_6271	Pocillopora_meandrina_HIv1___Sc0000026	1613405	1613814	410	139	97	0.02158273381294964	-	AGAGAGAAAAUGUCACGUUGUGGAAUGAGCU	11	54	61	5	4	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1614939-1615346	Cluster_6272	Pocillopora_meandrina_HIv1___Sc0000026	1614939	1615346	408	146	103	0.00684931506849315	-	GGGGUCUGCGAUCUGAGAAA	6	56	46	7	10	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1616657-1617081	Cluster_6273	Pocillopora_meandrina_HIv1___Sc0000026	1616657	1617081	425	283	203	0.0	-	AAUGCCGAUGAAGACUGGAGACGGAGAUU	7	95	101	25	25	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1842927-1843347	Cluster_6274	Pocillopora_meandrina_HIv1___Sc0000026	1842927	1843347	421	139	72	1.0	+	CAAAGAACUGAGCACAGA	15	57	40	16	13	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1905946-1906382	Cluster_6275	Pocillopora_meandrina_HIv1___Sc0000026	1905946	1906382	437	444	184	0.15765765765765766	-	UGACGUUCCAGAAUCUUUGACAAAACAG	30	3	422	4	5	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1906917-1907345	Cluster_6276	Pocillopora_meandrina_HIv1___Sc0000026	1906917	1907345	429	144	49	0.006944444444444444	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	19	1	142	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1937549-1937964	Cluster_6277	Pocillopora_meandrina_HIv1___Sc0000026	1937549	1937964	416	226	58	0.9867256637168141	+	UGUAUCCCAACCAAGU	146	148	74	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1997710-1998125	Cluster_6278	Pocillopora_meandrina_HIv1___Sc0000026	1997710	1998125	416	175	10	0.02857142857142857	-	GGGUGUGCUCUUAACC	108	172	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2020697-2021125	Cluster_6279	Pocillopora_meandrina_HIv1___Sc0000026	2020697	2021125	429	176	46	0.9886363636363636	+	GUUUCCGUAGUGUAGUGGUUAUCACGUGC	50	51	112	3	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2099923-2100395	Cluster_6280	Pocillopora_meandrina_HIv1___Sc0000026	2099923	2100395	473	5281	479	0.010225336110585117	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	1059	1483	3643	18	76	35	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2270068-2270496	Cluster_6281	Pocillopora_meandrina_HIv1___Sc0000026	2270068	2270496	429	97	27	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	34	1	94	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2272742-2273165	Cluster_6282	Pocillopora_meandrina_HIv1___Sc0000026	2272742	2273165	424	101	45	0.1782178217821782	-	UCUUUCCAUUUACAGACUCAAGUGGCUGU	18	1	93	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2274567-2274996	Cluster_6283	Pocillopora_meandrina_HIv1___Sc0000026	2274567	2274996	430	197	43	0.9746192893401016	+	UGGAGAUGGAAUCAAGAAAUGCAAAACAGG	68	5	180	0	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2275173-2275598	Cluster_6284	Pocillopora_meandrina_HIv1___Sc0000026	2275173	2275598	426	222	42	0.14414414414414414	-	UAGUUUGAAAAGAUAUCGCUCAGUG	96	5	208	4	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2496420-2496840	Cluster_6285	Pocillopora_meandrina_HIv1___Sc0000026	2496420	2496840	421	144	17	0.006944444444444444	-	AAAGUUCUGGUUUAAAAAAAAA	39	58	1	31	43	11	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2593185-2593614	Cluster_6286	Pocillopora_meandrina_HIv1___Sc0000026	2593185	2593614	430	311	32	0.9967845659163987	+	AACUACUGCUCGUACUCUAGAUAUGACA	84	14	294	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2699237-2699665	Cluster_6287	Pocillopora_meandrina_HIv1___Sc0000026	2699237	2699665	429	423	60	0.01182033096926714	-	UGACCGGUUUGCCCGACUGAAUAUCUCUC	219	6	412	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2700106-2700534	Cluster_6288	Pocillopora_meandrina_HIv1___Sc0000026	2700106	2700534	429	170	47	0.01764705882352941	-	UUGGAUAAAUUGGGUGUUAGUGAGAAGCC	43	5	165	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2809839-2810254	Cluster_6289	Pocillopora_meandrina_HIv1___Sc0000026	2809839	2810254	416	130	12	0.9615384615384616	+	UCCCAAGGAUGAAGAA	88	124	5	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2854077-2854491	Cluster_6290	Pocillopora_meandrina_HIv1___Sc0000026	2854077	2854491	415	142	31	0.20422535211267606	.	AAGUGUGCUCUUAACC	46	117	24	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2854799-2855381	Cluster_6291	Pocillopora_meandrina_HIv1___Sc0000026	2854799	2855381	583	1659	274	0.9758890898131405	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	483	6	1631	4	4	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2855709-2856305	Cluster_6292	Pocillopora_meandrina_HIv1___Sc0000026	2855709	2856305	597	5455	518	0.9970669110907424	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	813	19	5399	5	6	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2858479-2858891	Cluster_6293	Pocillopora_meandrina_HIv1___Sc0000026	2858479	2858891	413	97	45	0.9896907216494846	+	AGUUUCUUACUUCGGACAUCAAAUUUUGU	15	4	92	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2861063-2861801	Cluster_6294	Pocillopora_meandrina_HIv1___Sc0000026	2861063	2861801	739	1678	274	0.9970202622169249	+	UAACGAGAUUAAAACGACAAUGAACAAUAUA	384	13	1654	0	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2861901-2863409	Cluster_6295	Pocillopora_meandrina_HIv1___Sc0000026	2861901	2863409	1509	7937	627	0.9998740078115157	+	UCUGGAAAAUUUUCAGCGUGUGGGCAUCUC	2667	17	7866	7	12	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2864434-2864857	Cluster_6296	Pocillopora_meandrina_HIv1___Sc0000026	2864434	2864857	424	231	115	1.0	+	UUAGAGACACGAGCUGAACUCCAUUGUAGC	19	5	224	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2864896-2865622	Cluster_6297	Pocillopora_meandrina_HIv1___Sc0000026	2864896	2865622	727	400	160	0.995	+	UUUUGUUACAAGAAUCGAUCUGUGGUUCCAC	33	5	391	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2865714-2866301	Cluster_6298	Pocillopora_meandrina_HIv1___Sc0000026	2865714	2866301	588	467	146	0.9978586723768736	+	UUUUCCCAUAUCUAGGAUUAAAUAUCUAU	123	11	448	2	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2866335-2866990	Cluster_6299	Pocillopora_meandrina_HIv1___Sc0000026	2866335	2866990	656	5340	557	0.9992509363295881	+	UGAAAUGACUCUCGGUACAGGACCAUGUG	1000	38	5243	13	6	5	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2867361-2867821	Cluster_6300	Pocillopora_meandrina_HIv1___Sc0000026	2867361	2867821	461	1091	148	0.999083409715857	+	UUAUAAGCUUGUGAUCGUUUAUCCAACUGGC	371	21	1061	4	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2867919-2868544	Cluster_6301	Pocillopora_meandrina_HIv1___Sc0000026	2867919	2868544	626	2080	187	1.0	+	UGCAACUUGCCGUCCAUUGUAAAGAACGAU	1129	5	2061	0	7	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2874318-2875769	Cluster_6302	Pocillopora_meandrina_HIv1___Sc0000026	2874318	2875769	1452	12405	1427	0.9854091092301491	+	UCCGAUCCCUGAUCUAAUCCCUGACCCGA	1659	188	11956	28	53	116	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2877087-2877596	Cluster_6303	Pocillopora_meandrina_HIv1___Sc0000026	2877087	2877596	510	432	95	0.9351851851851852	+	UUGGUUCCCUCUUCCACUAGAUGGUAAGU	69	48	369	3	6	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3143490-3144415	Cluster_6304	Pocillopora_meandrina_HIv1___Sc0000026	3143490	3144415	926	896	405	0.8649553571428571	+	UUCGAUCUUUUCUGUGUAAUGUGUAGCC	33	13	797	6	5	27	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3240248-3240674	Cluster_6305	Pocillopora_meandrina_HIv1___Sc0000026	3240248	3240674	427	142	17	0.0	-	UGAAACUCUGAUCUGAAAACAUUUGUC	65	1	141	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3383355-3383785	Cluster_6306	Pocillopora_meandrina_HIv1___Sc0000026	3383355	3383785	431	545	83	0.9926605504587156	+	AAUUAAAUGUAUAAACGAAAAUAGUAGAAU	100	9	526	3	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3714299-3714726	Cluster_6307	Pocillopora_meandrina_HIv1___Sc0000026	3714299	3714726	428	99	25	0.0	-	AGUCAUUUCGAAACAUGGACAACUGGGU	31	1	96	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3864683-3865111	Cluster_6308	Pocillopora_meandrina_HIv1___Sc0000026	3864683	3865111	429	196	38	0.0	-	AGGAUGGACUGUGUUCCAGAAGAGACUG	44	10	181	0	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3907219-3907656	Cluster_6309	Pocillopora_meandrina_HIv1___Sc0000026	3907219	3907656	438	579	206	0.9810017271157168	+	CCCGCCGGGGAGCCA	68	158	355	5	39	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3912046-3912474	Cluster_6310	Pocillopora_meandrina_HIv1___Sc0000026	3912046	3912474	429	295	91	0.27796610169491526	.	GACGCGUAUAAUGUAGCUCUGGUUGAGG	52	16	260	8	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4115811-4116237	Cluster_6311	Pocillopora_meandrina_HIv1___Sc0000026	4115811	4116237	427	110	47	0.9727272727272728	+	AGGAUGGACAGUGUUUCAGAAGAGACUGG	13	10	84	2	6	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4178493-4178914	Cluster_6312	Pocillopora_meandrina_HIv1___Sc0000026	4178493	4178914	422	88	8	0.8977272727272727	+	UCUGACGAAGGGCUGACACUCG	78	1	5	1	79	0	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4340247-4340654	Cluster_6313	Pocillopora_meandrina_HIv1___Sc0000026	4340247	4340654	408	186	119	0.010752688172043012	-	AAAUCGGCCGUGGAU	16	118	42	12	6	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4542219-4542774	Cluster_6314	Pocillopora_meandrina_HIv1___Sc0000026	4542219	4542774	556	5368	401	0.2567064083457526	.	UCCGGUGUAAAAUAAAACAGAAGCAUU	1278	75	4552	352	28	111	250	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4570036-4570464	Cluster_6315	Pocillopora_meandrina_HIv1___Sc0000026	4570036	4570464	429	379	44	0.002638522427440633	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	281	1	376	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4606865-4607294	Cluster_6316	Pocillopora_meandrina_HIv1___Sc0000026	4606865	4607294	430	283	87	0.9858657243816255	+	UGUAAAGACGUUUUGAGGCUUUGGAGACA	55	2	278	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4661408-4661833	Cluster_6317	Pocillopora_meandrina_HIv1___Sc0000026	4661408	4661833	426	136	67	0.03676470588235294	-	UGCUCGAUUAAUUUGGACAAAGUGUCAUCUC	11	2	131	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4824249-4824664	Cluster_6318	Pocillopora_meandrina_HIv1___Sc0000026	4824249	4824664	416	151	16	1.0	+	UGCAAAUCGAUCGUCA	100	151	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4829174-4829590	Cluster_6319	Pocillopora_meandrina_HIv1___Sc0000026	4829174	4829590	417	220	10	0.0	-	AGCGUGCUCUUAACU	82	220	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4831712-4832128	Cluster_6320	Pocillopora_meandrina_HIv1___Sc0000026	4831712	4832128	417	231	11	0.0	-	AGCGUGCUCUUAACU	93	231	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4836278-4836694	Cluster_6321	Pocillopora_meandrina_HIv1___Sc0000026	4836278	4836694	417	254	14	0.007874015748031496	-	AGCGUGCUCUUAACU	91	254	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4840641-4841057	Cluster_6322	Pocillopora_meandrina_HIv1___Sc0000026	4840641	4841057	417	200	9	0.0	-	AGCGUGCUCUUAACU	73	200	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4894731-4895145	Cluster_6323	Pocillopora_meandrina_HIv1___Sc0000026	4894731	4895145	415	97	28	0.9896907216494846	+	GGCCGGGAGGUGGGGGG	39	94	1	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4918463-4918885	Cluster_6324	Pocillopora_meandrina_HIv1___Sc0000026	4918463	4918885	423	165	29	0.9818181818181818	+	UUCGCGUCUGAAGCUGUUAGAGU	86	15	2	5	15	126	2	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5244402-5244920	Cluster_6325	Pocillopora_meandrina_HIv1___Sc0000026	5244402	5244920	519	3223	321	0.9996897300651567	+	GUUGUCAGUCAACUCUCAAACAUCU	1078	154	2575	36	322	64	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5310165-5311667	Cluster_6326	Pocillopora_meandrina_HIv1___Sc0000026	5310165	5311667	1503	1784	785	0.032511210762331835	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	48	13	1675	9	24	31	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5321896-5322314	Cluster_6327	Pocillopora_meandrina_HIv1___Sc0000026	5321896	5322314	419	751	73	0.017310252996005325	-	GAUGGAUGGAGACUGCUC	159	740	5	2	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5391496-5391926	Cluster_6328	Pocillopora_meandrina_HIv1___Sc0000026	5391496	5391926	431	41297	426	0.9999757851659927	+	GCACUGGUGGUUCAGUGGUAGAAUUCUC	12903	29	41183	0	5	10	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5482131-5482553	Cluster_6329	Pocillopora_meandrina_HIv1___Sc0000026	5482131	5482553	423	155	40	1.0	+	UAACGUCAACUUCUUGUCUCUAGA	45	11	18	11	2	57	56	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5486208-5486634	Cluster_6330	Pocillopora_meandrina_HIv1___Sc0000026	5486208	5486634	427	729	150	1.0	+	GCAAAAUGAUGAAGAACCAUGGGC	144	63	124	36	41	102	363	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:222628-223057	Cluster_6331	Pocillopora_meandrina_HIv1___Sc0000027	222628	223057	430	231	19	0.9956709956709957	+	UUAUAACCGAGUGUGCCUUAUAACCGAAU	106	0	231	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:242475-242889	Cluster_6332	Pocillopora_meandrina_HIv1___Sc0000027	242475	242889	415	90	21	0.03333333333333333	-	UUUGUUCUAAGAUUUGC	24	87	1	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:433322-433863	Cluster_6333	Pocillopora_meandrina_HIv1___Sc0000027	433322	433863	542	6002	805	0.0004998333888703765	-	GGUGACCCGCUUACUUCUGCG	705	2983	1194	1338	205	176	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:440347-440761	Cluster_6334	Pocillopora_meandrina_HIv1___Sc0000027	440347	440761	415	161	57	0.9751552795031055	+	GAGGUCCGGACGGGG	83	132	13	2	5	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:489845-490265	Cluster_6335	Pocillopora_meandrina_HIv1___Sc0000027	489845	490265	421	265	190	0.9849056603773585	+	CAUGACCCUGGACGCGGUGCACCGUU	6	113	61	27	16	21	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:490699-491360	Cluster_6336	Pocillopora_meandrina_HIv1___Sc0000027	490699	491360	662	429	286	0.9976689976689976	+	GAGGGAACUAUUGUCUGCAAU	27	165	95	65	34	46	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:633030-635072	Cluster_6337	Pocillopora_meandrina_HIv1___Sc0000027	633030	635072	2043	9269	1633	0.021900960189880248	-	UACGAGCGAUAGAUCUUAAGCAUGUGCUGC	898	38	8490	99	37	82	523	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:639475-639959	Cluster_6338	Pocillopora_meandrina_HIv1___Sc0000027	639475	639959	485	2597	330	0.06199460916442048	-	UAGGCGUUAAACUUUCAUUGAUAA	816	22	1632	4	4	15	920	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:661511-662214	Cluster_6339	Pocillopora_meandrina_HIv1___Sc0000027	661511	662214	704	3928	751	0.9513747454175153	+	UUCAUCGGGAUCUCCUAAAAUAAGUGG	766	18	3798	7	13	34	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:662408-662994	Cluster_6340	Pocillopora_meandrina_HIv1___Sc0000027	662408	662994	587	587	225	0.5417376490630323	.	CAGGAAUGUAGUGCUGAACAACCA	31	10	428	21	12	51	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:663455-663885	Cluster_6341	Pocillopora_meandrina_HIv1___Sc0000027	663455	663885	431	249	98	0.8433734939759037	+	UGAAGUAUAGAACAACAACAUCCCAACCAGG	20	5	206	0	3	34	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:665653-666080	Cluster_6342	Pocillopora_meandrina_HIv1___Sc0000027	665653	666080	428	94	25	0.9680851063829787	+	UGAACAGAGGUAAAUCUUCGUACAUGAAUGA	49	1	92	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:698437-698866	Cluster_6343	Pocillopora_meandrina_HIv1___Sc0000027	698437	698866	430	147	46	0.027210884353741496	-	UGUACUGUGAACAUAGUGUUACCAACCAUU	59	0	146	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:704407-704834	Cluster_6344	Pocillopora_meandrina_HIv1___Sc0000027	704407	704834	428	176	62	0.6818181818181818	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	44	4	163	2	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:764669-765087	Cluster_6345	Pocillopora_meandrina_HIv1___Sc0000027	764669	765087	419	277	180	0.9891696750902527	+	AAGAACCCCUGAGCGCGG	21	152	63	19	11	18	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:765966-766467	Cluster_6346	Pocillopora_meandrina_HIv1___Sc0000027	765966	766467	502	816	462	0.9901960784313726	+	CAUAGCGUGAACUCAAGAGAGCU	54	227	291	34	46	148	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:783467-783891	Cluster_6347	Pocillopora_meandrina_HIv1___Sc0000027	783467	783891	425	105	48	0.02857142857142857	-	UGUGUAGAUAUGUCUUUUGGACAGGA	19	3	100	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:802361-802789	Cluster_6348	Pocillopora_meandrina_HIv1___Sc0000027	802361	802789	429	2217	82	0.9981957600360848	+	UCUUGGACUGCCAGAGAACUUUGAGCAUU	1351	23	2185	3	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:837534-837952	Cluster_6349	Pocillopora_meandrina_HIv1___Sc0000027	837534	837952	419	135	46	0.022222222222222223	-	UAGGGAUUGGAGGGU	20	82	4	8	28	13	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:890314-890729	Cluster_6350	Pocillopora_meandrina_HIv1___Sc0000027	890314	890729	416	203	14	0.0049261083743842365	-	AUUCUAUUUUGUUGGU	182	203	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:953118-953545	Cluster_6351	Pocillopora_meandrina_HIv1___Sc0000027	953118	953545	428	124	43	0.008064516129032258	-	UGAAACGUGUUGCUGAACGCUUGUUGUA	22	2	122	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:953648-954075	Cluster_6352	Pocillopora_meandrina_HIv1___Sc0000027	953648	954075	428	83	13	0.0	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	35	0	83	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1050277-1050697	Cluster_6353	Pocillopora_meandrina_HIv1___Sc0000027	1050277	1050697	421	157	58	0.012738853503184714	-	AACUGGUGCACUUGUAGUGGGUGAUC	54	7	134	3	4	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1055663-1056079	Cluster_6354	Pocillopora_meandrina_HIv1___Sc0000027	1055663	1056079	417	306	52	0.07516339869281045	-	UAGUGUGCUCUUAACUA	116	260	43	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1068731-1069156	Cluster_6355	Pocillopora_meandrina_HIv1___Sc0000027	1068731	1069156	426	106	36	0.03773584905660377	-	UGCCGAAAGAGGAGAGAUUGCCCUGUC	16	1	103	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1198676-1199103	Cluster_6356	Pocillopora_meandrina_HIv1___Sc0000027	1198676	1199103	428	225	90	0.9422222222222222	+	UAAAGACUCAUCAUGACAAUCGGUCAGA	37	14	199	2	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1397486-1398306	Cluster_6357	Pocillopora_meandrina_HIv1___Sc0000027	1397486	1398306	821	3485	1593	0.0020086083213773313	-	CUUGUCAAUGAUAAAAGUUCUACCCA	59	1298	1261	267	214	260	185	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1400735-1401245	Cluster_6358	Pocillopora_meandrina_HIv1___Sc0000027	1400735	1401245	511	738	413	0.0	-	GAUCUGGAGAAACAUGUUAAUGAAU	18	327	206	53	53	54	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1401646-1402540	Cluster_6359	Pocillopora_meandrina_HIv1___Sc0000027	1401646	1402540	895	3905	1381	0.0058898847631242	-	ACAGUGAUUGAACGAGGCA	179	1741	830	413	393	303	225	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1405676-1406712	Cluster_6360	Pocillopora_meandrina_HIv1___Sc0000027	1405676	1406712	1037	1085	789	0.0	-	AUUUAGGUCUGGGAACAGUGUAUCC	11	363	414	67	94	85	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1406775-1407194	Cluster_6361	Pocillopora_meandrina_HIv1___Sc0000027	1406775	1407194	420	204	105	0.0	-	UUAGAAAAAGACGUGUACCA	26	124	32	28	8	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1408831-1409253	Cluster_6362	Pocillopora_meandrina_HIv1___Sc0000027	1408831	1409253	423	166	127	0.012048192771084338	-	UGUGGACAAAGUGUGAAAUGCA	3	51	62	7	18	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1541116-1541543	Cluster_6363	Pocillopora_meandrina_HIv1___Sc0000027	1541116	1541543	428	345	74	0.0	-	CUCGUGGCUGUCAGGUUCGCUGUGCUGU	54	50	169	54	15	48	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1658367-1658797	Cluster_6364	Pocillopora_meandrina_HIv1___Sc0000027	1658367	1658797	431	369	77	0.04878048780487805	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	138	7	346	5	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1662174-1662991	Cluster_6365	Pocillopora_meandrina_HIv1___Sc0000027	1662174	1662991	818	690	157	0.03188405797101449	-	UACUAGAAUCUAACGAACAGCUCGAACACU	75	41	624	3	3	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1668827-1669254	Cluster_6366	Pocillopora_meandrina_HIv1___Sc0000027	1668827	1669254	428	238	38	0.037815126050420166	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	117	1	232	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1769526-1769940	Cluster_6367	Pocillopora_meandrina_HIv1___Sc0000027	1769526	1769940	415	90	33	0.9666666666666667	+	CCUGUGCAAUUUUGUUGUC	18	53	20	1	3	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1772385-1772801	Cluster_6368	Pocillopora_meandrina_HIv1___Sc0000027	1772385	1772801	417	223	47	0.017937219730941704	-	GACUUUGGUGGAGAUG	38	215	1	0	4	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1871789-1872212	Cluster_6369	Pocillopora_meandrina_HIv1___Sc0000027	1871789	1872212	424	2207	100	0.9977344811961939	+	UAGUUUUGAUUGUUGACAGCGUU	999	84	11	26	407	1534	145	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1874812-1875227	Cluster_6370	Pocillopora_meandrina_HIv1___Sc0000027	1874812	1875227	416	86	11	0.0	-	UAUAUCAGAACGGAAU	26	86	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1884809-1885224	Cluster_6371	Pocillopora_meandrina_HIv1___Sc0000027	1884809	1885224	416	179	23	0.027932960893854747	-	CGCCUUCCGGACCUC	66	177	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1963239-1963651	Cluster_6372	Pocillopora_meandrina_HIv1___Sc0000027	1963239	1963651	413	160	111	0.03125	-	GUAGUCGAGCUGUAGUUUGCA	5	62	49	13	9	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1965565-1966263	Cluster_6373	Pocillopora_meandrina_HIv1___Sc0000027	1965565	1966263	699	729	493	0.00411522633744856	-	AGGACUGAUGCGUUUCUCGUGUU	12	229	289	51	54	58	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1970770-1971419	Cluster_6374	Pocillopora_meandrina_HIv1___Sc0000027	1970770	1971419	650	1538	730	0.006501950585175552	-	CAUCGAUGUAGAAAUAAAUGUAACACUUUU	18	527	618	107	107	97	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1974245-1974685	Cluster_6375	Pocillopora_meandrina_HIv1___Sc0000027	1974245	1974685	441	362	231	0.011049723756906077	-	GCAAAAGGGACGAAGA	16	182	75	30	28	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1977430-1977832	Cluster_6376	Pocillopora_meandrina_HIv1___Sc0000027	1977430	1977832	403	162	118	0.012345679012345678	-	CUUCACAAGGACUGAUGUGUUCC	6	40	57	15	13	22	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1981425-1981841	Cluster_6377	Pocillopora_meandrina_HIv1___Sc0000027	1981425	1981841	417	344	254	0.005813953488372093	-	CAGUUAGGACACGUUGCGCAU	8	105	129	29	34	25	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1981889-1982310	Cluster_6378	Pocillopora_meandrina_HIv1___Sc0000027	1981889	1982310	422	184	113	0.005434782608695652	-	GACGACUGUGUACUGCUGU	10	83	58	12	12	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2333763-2334178	Cluster_6379	Pocillopora_meandrina_HIv1___Sc0000027	2333763	2334178	416	351	10	0.002849002849002849	-	CGGACCUCAGAUCCGG	230	349	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2334838-2335266	Cluster_6380	Pocillopora_meandrina_HIv1___Sc0000027	2334838	2335266	429	194	59	1.0	+	UCUGACGAGAAACGAGCUUUCCCAAAAUC	59	4	186	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2341386-2341800	Cluster_6381	Pocillopora_meandrina_HIv1___Sc0000027	2341386	2341800	415	94	25	1.0	+	UGAGUACUUAUAGAA	65	67	27	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2343596-2344208	Cluster_6382	Pocillopora_meandrina_HIv1___Sc0000027	2343596	2344208	613	503	155	0.9662027833001988	+	UAAUGCUGCUUAAUUCUUCCUCCAAUAGGA	93	7	481	2	6	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2345299-2345708	Cluster_6383	Pocillopora_meandrina_HIv1___Sc0000027	2345299	2345708	410	122	61	0.8442622950819673	+	UUGAAUGUUUUCUGCACUGUAGAGAAGAC	17	5	102	0	4	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2346269-2346694	Cluster_6384	Pocillopora_meandrina_HIv1___Sc0000027	2346269	2346694	426	233	130	0.7939914163090128	.	UGAACUACACGAGGAACUAGACGAACUUUAC	12	14	192	0	4	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2449992-2450525	Cluster_6385	Pocillopora_meandrina_HIv1___Sc0000027	2449992	2450525	534	1191	270	0.8664987405541562	+	UUAUUUCUACAUAGAGCGAGCUCACAUC	512	67	1056	15	8	39	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2497199-2497614	Cluster_6386	Pocillopora_meandrina_HIv1___Sc0000027	2497199	2497614	416	221	62	0.03619909502262444	-	UGUAUCCCAACCAAGU	133	142	72	3	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2572781-2573209	Cluster_6387	Pocillopora_meandrina_HIv1___Sc0000027	2572781	2573209	429	160	76	0.75625	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	26	33	100	16	6	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2691298-2691725	Cluster_6388	Pocillopora_meandrina_HIv1___Sc0000027	2691298	2691725	428	94	17	1.0	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	29	0	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2889739-2890161	Cluster_6389	Pocillopora_meandrina_HIv1___Sc0000027	2889739	2890161	423	339	80	0.08849557522123894	-	UUCGCGUCUGAAGCUGUUAGAGU	143	28	16	10	52	221	12	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2974520-2974943	Cluster_6390	Pocillopora_meandrina_HIv1___Sc0000027	2974520	2974943	424	173	17	0.976878612716763	+	UUUGAACUCCUAAGAUCUGAUUGU	109	2	3	1	1	1	165	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2994567-2994993	Cluster_6391	Pocillopora_meandrina_HIv1___Sc0000027	2994567	2994993	427	199	54	0.23618090452261306	.	UGAUUCGAUUUUUCUCUUUUUAGGACC	34	0	167	1	2	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2995734-2996163	Cluster_6392	Pocillopora_meandrina_HIv1___Sc0000027	2995734	2996163	430	235	112	0.06808510638297872	-	UGAAAGAACUUUCAUGAUGCGUUUUACCU	16	1	220	0	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2996505-2996923	Cluster_6393	Pocillopora_meandrina_HIv1___Sc0000027	2996505	2996923	419	288	180	0.06944444444444445	-	UCAGACACGUGGAUACUUGCGAUGAAGU	19	2	267	1	0	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2997013-2997436	Cluster_6394	Pocillopora_meandrina_HIv1___Sc0000027	2997013	2997436	424	204	124	0.11764705882352941	-	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	16	0	191	1	5	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3271772-3272346	Cluster_6395	Pocillopora_meandrina_HIv1___Sc0000027	3271772	3272346	575	925	274	0.17405405405405405	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	128	4	873	5	6	12	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3272704-3273120	Cluster_6396	Pocillopora_meandrina_HIv1___Sc0000027	3272704	3273120	417	261	144	0.13026819923371646	-	UGAACUUAACGACACCUAGAUCUGCACAAGC	21	5	225	3	9	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3273423-3274148	Cluster_6397	Pocillopora_meandrina_HIv1___Sc0000027	3273423	3274148	726	1046	248	0.1462715105162524	-	UAACUCCGAUCCGAUGACCUAGAAAGUC	171	7	997	0	0	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3274793-3275472	Cluster_6398	Pocillopora_meandrina_HIv1___Sc0000027	3274793	3275472	680	253	149	0.11462450592885376	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	22	6	232	5	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3402621-3403050	Cluster_6399	Pocillopora_meandrina_HIv1___Sc0000027	3402621	3403050	430	324	101	0.9290123456790124	+	UAGUAUAACUUUGAUCUGAUGAAAAUCAUC	68	0	313	1	3	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3407295-3407721	Cluster_6400	Pocillopora_meandrina_HIv1___Sc0000027	3407295	3407721	427	131	51	0.8244274809160306	+	UGCUUCAUUUCCUUGACUGUAGUCUGC	30	5	114	3	1	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3414587-3415537	Cluster_6401	Pocillopora_meandrina_HIv1___Sc0000027	3414587	3415537	951	2922	595	0.9298425735797399	+	UGACUCCUUUCAAUCUGGCACAACCC	396	70	2672	30	29	66	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3747916-3748344	Cluster_6402	Pocillopora_meandrina_HIv1___Sc0000027	3747916	3748344	429	270	68	0.0	-	AAGGAAACCGAUCAGUUUAGACUCACAUU	109	3	257	2	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3928063-3928476	Cluster_6403	Pocillopora_meandrina_HIv1___Sc0000027	3928063	3928476	414	182	117	0.07692307692307693	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	35	6	169	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3929345-3929772	Cluster_6404	Pocillopora_meandrina_HIv1___Sc0000027	3929345	3929772	428	186	77	0.978494623655914	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	20	1	178	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3931252-3932300	Cluster_6405	Pocillopora_meandrina_HIv1___Sc0000027	3931252	3932300	1049	748	369	0.7820855614973262	.	UCUUCCUGUUCUGUACUGAAACCAGUC	27	8	691	3	10	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3932560-3932990	Cluster_6406	Pocillopora_meandrina_HIv1___Sc0000027	3932560	3932990	431	625	222	0.8928	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	80	6	538	0	2	6	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3973506-3973954	Cluster_6407	Pocillopora_meandrina_HIv1___Sc0000027	3973506	3973954	449	2623	175	0.8402592451391536	+	UCCAUCUUCACCUAUUCUUGCACUGCU	487	11	2551	4	9	17	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4051379-4051821	Cluster_6408	Pocillopora_meandrina_HIv1___Sc0000027	4051379	4051821	443	452	127	0.11504424778761062	-	UAGGAACCAAAUACUUUCACAGUAAAGC	83	6	408	7	1	21	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4138015-4138983	Cluster_6409	Pocillopora_meandrina_HIv1___Sc0000027	4138015	4138983	969	1340	419	0.15074626865671642	-	UCACAGGUAUAUAUUCUAUCGCUCUUCAAC	80	22	1206	8	8	38	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4142855-4143281	Cluster_6410	Pocillopora_meandrina_HIv1___Sc0000027	4142855	4143281	427	127	29	0.9921259842519685	+	UAAAAGCUCCUGUGCAACCUGCACUGA	58	2	124	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4191636-4192761	Cluster_6411	Pocillopora_meandrina_HIv1___Sc0000027	4191636	4192761	1126	2200	599	0.06636363636363636	-	UCGUAUGAAAUGAGCUUCUGAACUAGGA	228	22	2080	4	8	23	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4311001-4311455	Cluster_6412	Pocillopora_meandrina_HIv1___Sc0000027	4311001	4311455	455	188	66	0.0	-	AAGGAAACGGAUCGGUUUAGACUCACAUU	37	7	149	6	2	17	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4356950-4357770	Cluster_6413	Pocillopora_meandrina_HIv1___Sc0000027	4356950	4357770	821	1445	198	0.17093425605536333	-	UAAUCGUUGGCUUUUUCUCGAGGCGGG	277	114	1291	9	9	15	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4585570-4587589	Cluster_6414	Pocillopora_meandrina_HIv1___Sc0000027	4585570	4587589	2020	6569	1750	0.2192114477089359	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	468	261	5810	30	45	172	251	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4588481-4588908	Cluster_6415	Pocillopora_meandrina_HIv1___Sc0000027	4588481	4588908	428	194	114	0.20618556701030927	.	UCCGCUACGUUUUGCUCUCCUGGGACGUGU	14	4	175	2	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4589618-4590375	Cluster_6416	Pocillopora_meandrina_HIv1___Sc0000027	4589618	4590375	758	977	346	0.06345957011258956	-	UGUGUGUCUGAAUGGUCCUUGUGGAACA	68	4	949	6	4	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4691830-4692243	Cluster_6417	Pocillopora_meandrina_HIv1___Sc0000027	4691830	4692243	414	200	139	1.0	+	CGCGGUGCUUCGGAAGA	6	102	51	13	14	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4692661-4693174	Cluster_6418	Pocillopora_meandrina_HIv1___Sc0000027	4692661	4693174	514	333	251	0.996996996996997	+	AUCGUGCUGUCAUGUGGAC	8	98	130	27	21	29	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4723163-4723578	Cluster_6419	Pocillopora_meandrina_HIv1___Sc0000027	4723163	4723578	416	93	5	1.0	+	CGUGGAUUGGCCCAGCC	53	93	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4746754-4747703	Cluster_6420	Pocillopora_meandrina_HIv1___Sc0000027	4746754	4747703	950	2451	468	0.9971440228478172	+	UCGUUUGUUCCGAGGAUAAGAUGUACGGG	442	52	2370	6	4	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4756637-4757053	Cluster_6421	Pocillopora_meandrina_HIv1___Sc0000027	4756637	4757053	417	115	23	0.034782608695652174	-	GUCCUGGCAGGGUCGCCA	46	108	4	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4766494-4766910	Cluster_6422	Pocillopora_meandrina_HIv1___Sc0000027	4766494	4766910	417	1158	32	0.0008635578583765112	-	CUUUCCGAGGUCGAG	1013	1157	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4943975-4944393	Cluster_6423	Pocillopora_meandrina_HIv1___Sc0000027	4943975	4944393	419	1171	62	1.0	+	UGCCCGGGUCCUCCACCA	561	1149	22	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:5348420-5348854	Cluster_6424	Pocillopora_meandrina_HIv1___Sc0000027	5348420	5348854	435	364	64	0.005494505494505495	-	UGUGUCUAAUGUUGUCGAACGCCCCGCA	112	2	353	2	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:5491142-5492079	Cluster_6425	Pocillopora_meandrina_HIv1___Sc0000027	5491142	5492079	938	653	352	0.1362940275650842	-	UUCGAUCUUUUCUGUGUAAUGUGUAGC	25	21	583	3	7	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:96302-96724	Cluster_6426	Pocillopora_meandrina_HIv1___Sc0000028	96302	96724	423	150	50	0.18666666666666668	-	AAUCUCUUUAAGCAUGGACCUGG	42	0	42	2	0	68	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:213781-214226	Cluster_6427	Pocillopora_meandrina_HIv1___Sc0000028	213781	214226	446	380	293	0.9973684210526316	+	GACAUCAAAGAGAAGCUCUGUUA	5	142	125	27	28	29	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:215953-216389	Cluster_6428	Pocillopora_meandrina_HIv1___Sc0000028	215953	216389	437	497	337	0.9959758551307847	+	GAACUGUGAGUAUACUGAAGGU	8	167	163	46	51	37	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:217988-218637	Cluster_6429	Pocillopora_meandrina_HIv1___Sc0000028	217988	218637	650	834	548	0.9988009592326139	+	AGAAGGAAAUCACUGCUCUGGCU	17	274	284	66	91	76	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:407248-407667	Cluster_6430	Pocillopora_meandrina_HIv1___Sc0000028	407248	407667	420	98	34	0.01020408163265306	-	UUUUUCACGCAUGUUGUUAUGG	16	12	1	6	50	26	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:512013-512673	Cluster_6431	Pocillopora_meandrina_HIv1___Sc0000028	512013	512673	661	765	486	0.9986928104575163	+	GAAGAACGUGUGUAGUAAAACCUA	23	282	240	54	65	57	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:526854-527269	Cluster_6432	Pocillopora_meandrina_HIv1___Sc0000028	526854	527269	416	129	9	0.9922480620155039	+	GCGGGAAUAGCUCAGC	98	128	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:535351-535780	Cluster_6433	Pocillopora_meandrina_HIv1___Sc0000028	535351	535780	430	110	22	0.9545454545454546	+	UUCAGUCCCUCAAGCAAGUUGUCAAGCGGU	43	3	106	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:546898-548916	Cluster_6434	Pocillopora_meandrina_HIv1___Sc0000028	546898	548916	2019	2401	907	0.6780508121615993	.	UGAGGAAUAUGAUCUACACCAUUGCUGC	62	122	1936	37	84	75	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:598975-599397	Cluster_6435	Pocillopora_meandrina_HIv1___Sc0000028	598975	599397	423	130	47	0.14615384615384616	-	UAUGAUAUCACUGUGGAGCGAGG	45	19	31	6	1	58	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:716352-716779	Cluster_6436	Pocillopora_meandrina_HIv1___Sc0000028	716352	716779	428	80	22	1.0	+	UAAGACAUUUCGCAGAUUUUGACACUCGUU	37	0	80	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:795185-795603	Cluster_6437	Pocillopora_meandrina_HIv1___Sc0000028	795185	795603	419	322	218	1.0	+	UUUGCAGAUGUGGAAAAUGACC	7	141	82	35	31	13	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:797935-798365	Cluster_6438	Pocillopora_meandrina_HIv1___Sc0000028	797935	798365	431	330	235	0.996969696969697	+	GCAGUGAACCUGAUCACGAAAUUUGUUUUCA	8	96	139	27	17	34	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:820275-820700	Cluster_6439	Pocillopora_meandrina_HIv1___Sc0000028	820275	820700	426	176	18	0.0	-	UGGAUUCUUGAAAAAAAAAAAAAAAAA	36	4	123	3	5	15	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:866909-867338	Cluster_6440	Pocillopora_meandrina_HIv1___Sc0000028	866909	867338	430	516	107	0.9728682170542635	+	UGUUUAUCUUCUGUAUGAUUUGGCUCGGU	130	6	486	11	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:867670-868097	Cluster_6441	Pocillopora_meandrina_HIv1___Sc0000028	867670	868097	428	135	52	0.9333333333333333	+	UGAACGCAGAACAGUAGGCCCGUUGGUGA	21	1	125	2	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:893322-893750	Cluster_6442	Pocillopora_meandrina_HIv1___Sc0000028	893322	893750	429	230	125	0.004347826086956522	-	CAACAAUGGACAUAGAAGAGUACAAUGCAU	16	10	197	0	9	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:925585-926028	Cluster_6443	Pocillopora_meandrina_HIv1___Sc0000028	925585	926028	444	230	80	0.2782608695652174	.	GAAGAGCUGAAAAAACAGAAACAGAAGACA	32	23	203	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:928630-929114	Cluster_6444	Pocillopora_meandrina_HIv1___Sc0000028	928630	929114	485	424	98	0.2783018867924528	.	GCUGAAAACAACAAUGGACAUAGAAGAGC	92	10	378	4	4	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:929523-930086	Cluster_6445	Pocillopora_meandrina_HIv1___Sc0000028	929523	930086	564	694	262	0.008645533141210375	-	AACAGUGAAGUGUGAAUCUCUAAUGAUCUU	80	39	577	33	19	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:935841-936270	Cluster_6446	Pocillopora_meandrina_HIv1___Sc0000028	935841	936270	430	271	87	0.0036900369003690036	-	UCUCAAAGCCAUAUCUGCUGGUCUUCCAGU	54	10	244	2	6	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:975759-976189	Cluster_6447	Pocillopora_meandrina_HIv1___Sc0000028	975759	976189	431	117	28	0.008547008547008548	-	UGUGACUGAAAAGAUCCUGAAGGAACUGAAC	63	1	110	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:980374-980928	Cluster_6448	Pocillopora_meandrina_HIv1___Sc0000028	980374	980928	555	565	258	0.06902654867256637	-	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	48	8	526	1	14	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:981506-982018	Cluster_6449	Pocillopora_meandrina_HIv1___Sc0000028	981506	982018	513	196	100	0.025510204081632654	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	26	2	185	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:982238-982669	Cluster_6450	Pocillopora_meandrina_HIv1___Sc0000028	982238	982669	432	283	111	0.0812720848056537	-	UACGUGUAGAAAGCCUUCUCUGACAUC	24	3	263	2	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1030156-1030585	Cluster_6451	Pocillopora_meandrina_HIv1___Sc0000028	1030156	1030585	430	390	123	0.7410256410256411	.	UUUUGUGUUAUCUUGUCUUGGAGA	66	13	244	18	6	35	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1031663-1032256	Cluster_6452	Pocillopora_meandrina_HIv1___Sc0000028	1031663	1032256	594	1773	418	0.9306260575296108	+	UAUGAAAGAUCUUGAUGUGGUGCGUCA	147	32	1695	4	11	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1032408-1032895	Cluster_6453	Pocillopora_meandrina_HIv1___Sc0000028	1032408	1032895	488	3268	288	0.9599143206854345	+	UAAGAUCUCUUCGGUCAGAUCGUCACGG	1113	17	3219	4	6	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1044987-1045476	Cluster_6454	Pocillopora_meandrina_HIv1___Sc0000028	1044987	1045476	490	1349	374	0.2453669384729429	.	GAAGAGCUGAAAAAAUGGAAACAGAAGAC	87	64	1214	14	17	16	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1045550-1046462	Cluster_6455	Pocillopora_meandrina_HIv1___Sc0000028	1045550	1046462	913	1505	418	0.10365448504983389	-	GCUGAAAACAACGAUGGACACAGAAGAGU	259	48	1336	8	72	12	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1049910-1050670	Cluster_6456	Pocillopora_meandrina_HIv1___Sc0000028	1049910	1050670	761	1872	713	0.016025641025641024	-	CAACUAACCAUCCGUCGAUAUUGCAGUGA	80	115	1542	19	25	41	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1083748-1084176	Cluster_6457	Pocillopora_meandrina_HIv1___Sc0000028	1083748	1084176	429	146	22	0.03424657534246575	-	UUGACUGACAGAAGAUCUGGAAACUGAAGA	41	2	134	3	5	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1084464-1084887	Cluster_6458	Pocillopora_meandrina_HIv1___Sc0000028	1084464	1084887	424	235	110	0.23404255319148937	.	ACAAAUCCCAAAAGACUGAGCCCUCAACUC	40	7	203	1	3	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1085052-1085838	Cluster_6459	Pocillopora_meandrina_HIv1___Sc0000028	1085052	1085838	787	583	263	0.2109777015437393	.	UGCAUCUUUCUUUGUCGGACUCCACAGUU	32	9	499	2	4	10	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1092282-1093012	Cluster_6460	Pocillopora_meandrina_HIv1___Sc0000028	1092282	1093012	731	471	220	0.01910828025477707	-	UUUCCCUGAAAGGCUAUGAUGUAGUUGCA	32	11	416	0	2	24	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1114711-1115140	Cluster_6461	Pocillopora_meandrina_HIv1___Sc0000028	1114711	1115140	430	407	106	0.5257985257985258	.	UCUGUCUCAACAAUCUUUGUCUUCUGUU	50	2	395	2	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1115370-1115798	Cluster_6462	Pocillopora_meandrina_HIv1___Sc0000028	1115370	1115798	429	218	105	0.10091743119266056	-	GAAAAGAUCUUGAAGGAACUGAACCUGGCA	16	6	202	1	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1116461-1117551	Cluster_6463	Pocillopora_meandrina_HIv1___Sc0000028	1116461	1117551	1091	2744	930	0.08965014577259475	-	AUGGAUCCAAUUUGUUCACGUCUACUGCG	95	85	2361	44	50	53	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1141498-1141925	Cluster_6464	Pocillopora_meandrina_HIv1___Sc0000028	1141498	1141925	428	1387	89	0.996395097332372	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	701	3	1378	3	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1151158-1151877	Cluster_6465	Pocillopora_meandrina_HIv1___Sc0000028	1151158	1151877	720	2433	571	0.1812577065351418	-	UUAAACCGACUCACAGUCCGAUUCGAAU	242	72	2014	13	32	201	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1158472-1158900	Cluster_6466	Pocillopora_meandrina_HIv1___Sc0000028	1158472	1158900	429	354	115	0.002824858757062147	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	82	4	348	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1165516-1165926	Cluster_6467	Pocillopora_meandrina_HIv1___Sc0000028	1165516	1165926	411	100	51	0.54	.	AUGUCGGCCAUCUUUGUUAA	13	59	12	20	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1204201-1204631	Cluster_6468	Pocillopora_meandrina_HIv1___Sc0000028	1204201	1204631	431	120	36	0.03333333333333333	-	UGGAUUAUCGACGUUUAACAGAGAACUUGCC	47	7	107	3	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1221414-1222060	Cluster_6469	Pocillopora_meandrina_HIv1___Sc0000028	1221414	1222060	647	440	213	0.004545454545454545	-	AAUGAAUCAAAGUUGGCUGUAGACAGAUC	20	7	383	2	3	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1261645-1262093	Cluster_6470	Pocillopora_meandrina_HIv1___Sc0000028	1261645	1262093	449	633	166	0.13744075829383887	-	GAAGAGCUGAAAAAAUGGAAACAGAAGACA	92	5	622	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1264644-1265499	Cluster_6471	Pocillopora_meandrina_HIv1___Sc0000028	1264644	1265499	856	1633	424	0.02878138395590937	-	ACAAAGAGAAAAGGACAUUCUGAUGCAGA	72	47	1468	5	53	29	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1269510-1270947	Cluster_6472	Pocillopora_meandrina_HIv1___Sc0000028	1269510	1270947	1438	10839	2179	0.10286926838269213	-	AUCAGUCAGAUUUGGUUGCUCUGCCAUCCC	676	367	9874	67	90	182	259	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1373147-1373575	Cluster_6473	Pocillopora_meandrina_HIv1___Sc0000028	1373147	1373575	429	102	37	1.0	+	UCUCAAAGCCAUAUCUGCUGGUCUUCCAGU	23	3	98	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1395524-1396507	Cluster_6474	Pocillopora_meandrina_HIv1___Sc0000028	1395524	1396507	984	1337	486	0.9409124906507106	+	AUGGAUCCAAUUUGUACACGUCUACUGUG	82	59	1207	9	21	23	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1397764-1398188	Cluster_6475	Pocillopora_meandrina_HIv1___Sc0000028	1397764	1398188	425	168	78	1.0	+	UGAAGCUGAAAACAACAAUGGAUGAGGGA	14	5	147	2	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1558478-1558895	Cluster_6476	Pocillopora_meandrina_HIv1___Sc0000028	1558478	1558895	418	943	29	0.9766702014846236	+	GAAGUUCUGGUUUAAAAA	681	931	5	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1830461-1830875	Cluster_6477	Pocillopora_meandrina_HIv1___Sc0000028	1830461	1830875	415	372	44	0.8682795698924731	+	UGGCCUGAAAAAAAA	268	337	27	4	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1838433-1838839	Cluster_6478	Pocillopora_meandrina_HIv1___Sc0000028	1838433	1838839	407	159	107	0.0	-	AAGUUGGCAGAGAAUU	5	72	51	8	11	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1844679-1845079	Cluster_6479	Pocillopora_meandrina_HIv1___Sc0000028	1844679	1845079	401	223	167	0.004484304932735426	-	UUUGACAGCAAGAAAUGGGU	4	106	55	19	18	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1959386-1959901	Cluster_6480	Pocillopora_meandrina_HIv1___Sc0000028	1959386	1959901	516	418	166	0.861244019138756	+	UGAGAUUGUGUAGGUAUGUCUUUUGGACAGG	28	4	361	0	1	44	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2035084-2035513	Cluster_6481	Pocillopora_meandrina_HIv1___Sc0000028	2035084	2035513	430	863	61	1.0	+	CUUGCAAGGAUCAACCGAUGGAAAUUAUGU	371	3	846	2	7	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2235435-2235851	Cluster_6482	Pocillopora_meandrina_HIv1___Sc0000028	2235435	2235851	417	951	52	0.0	-	CUCGUUGUGUGUGUGU	406	951	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2254255-2254724	Cluster_6483	Pocillopora_meandrina_HIv1___Sc0000028	2254255	2254724	470	557	210	0.03590664272890485	-	GCUGAAAACAACAAUAGACGUAGAAGAGU	66	28	497	4	2	14	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2269759-2270188	Cluster_6484	Pocillopora_meandrina_HIv1___Sc0000028	2269759	2270188	430	305	46	0.980327868852459	+	UGAUCAAGUUUCCUAUCGCCUGUAAACACU	89	2	298	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2272485-2273583	Cluster_6485	Pocillopora_meandrina_HIv1___Sc0000028	2272485	2273583	1099	1182	450	0.23011844331641285	.	UCCGUGACACAACGACUUUGCCUUGCUU	107	18	1023	11	3	22	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2273753-2274189	Cluster_6486	Pocillopora_meandrina_HIv1___Sc0000028	2273753	2274189	437	474	218	0.18565400843881857	-	UAUGACGUUCCAGAAUCUUUGACAAAA	42	7	443	4	7	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2274766-2275194	Cluster_6487	Pocillopora_meandrina_HIv1___Sc0000028	2274766	2275194	429	139	50	0.007194244604316547	-	AAACGAUUGAAUAGCAUAACUGAUGAACUA	18	0	135	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2281627-2282045	Cluster_6488	Pocillopora_meandrina_HIv1___Sc0000028	2281627	2282045	419	152	77	0.02631578947368421	-	UGAAGAUCUGAACGUCUUGGCAUUGUC	30	5	146	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2285050-2285476	Cluster_6489	Pocillopora_meandrina_HIv1___Sc0000028	2285050	2285476	427	91	14	0.978021978021978	+	AACUACUGCUCGUGCUCUAGAUAUGACA	53	0	89	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2318943-2319363	Cluster_6490	Pocillopora_meandrina_HIv1___Sc0000028	2318943	2319363	421	467	28	0.0	-	UGGCAUGAAAAAAAA	160	390	0	40	37	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2340694-2341108	Cluster_6491	Pocillopora_meandrina_HIv1___Sc0000028	2340694	2341108	415	79	7	0.02531645569620253	-	AUAGGUAGCUGGAUCA	46	77	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2502458-2502858	Cluster_6492	Pocillopora_meandrina_HIv1___Sc0000028	2502458	2502858	401	384	229	0.765625	.	UUAGCCCAUUUCUCCCAGAAGAAUUCUC	9	10	307	5	8	20	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2503021-2503697	Cluster_6493	Pocillopora_meandrina_HIv1___Sc0000028	2503021	2503697	677	7916	554	0.9964628600303184	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2213	13	7785	7	55	25	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2506422-2506837	Cluster_6494	Pocillopora_meandrina_HIv1___Sc0000028	2506422	2506837	416	121	49	0.5950413223140496	.	UGAUUGAUUAGGACUAUUUUAUAUGAAU	21	7	104	2	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2516269-2516951	Cluster_6495	Pocillopora_meandrina_HIv1___Sc0000028	2516269	2516951	683	1511	340	0.7538054268696228	.	UGAAAACUUUGAACAGACUUUACCUGAAAA	147	13	1452	18	10	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2655966-2656393	Cluster_6496	Pocillopora_meandrina_HIv1___Sc0000028	2655966	2656393	428	250	42	0.008	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	113	1	243	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3016606-3017082	Cluster_6497	Pocillopora_meandrina_HIv1___Sc0000028	3016606	3017082	477	3460593	1640	2.022774709421189e-06	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	1110225	6211	3449767	137	339	331	3808	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3652276-3652691	Cluster_6498	Pocillopora_meandrina_HIv1___Sc0000028	3652276	3652691	416	441	26	1.0	+	GAGUGUGCUCUUAAU	219	441	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3737516-3738213	Cluster_6499	Pocillopora_meandrina_HIv1___Sc0000028	3737516	3738213	698	2041	489	0.39490445859872614	.	ACACAGUGCAACUCUCGAAUCUUAAAAAU	184	21	1879	11	17	45	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3889829-3890245	Cluster_6500	Pocillopora_meandrina_HIv1___Sc0000028	3889829	3890245	417	176	3	0.0	-	GAUGGAUGGAGACUGCC	173	176	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3991237-3991652	Cluster_6501	Pocillopora_meandrina_HIv1___Sc0000028	3991237	3991652	416	150	14	0.013333333333333334	-	GUUGGAUCCGGCCCAA	58	150	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4089363-4089779	Cluster_6502	Pocillopora_meandrina_HIv1___Sc0000028	4089363	4089779	417	901	19	0.0022197558268590455	-	GAGUGUGCUCUUAACCA	716	899	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4165139-4165567	Cluster_6503	Pocillopora_meandrina_HIv1___Sc0000028	4165139	4165567	429	183	58	0.01092896174863388	-	UAACGAACAGCUCGAACACUCGAUACCAGC	28	2	180	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4188650-4189069	Cluster_6504	Pocillopora_meandrina_HIv1___Sc0000028	4188650	4189069	420	129	85	0.7596899224806202	.	UAACACUAUAAACAUUCUGAGGGCGAUU	6	1	108	4	7	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4189085-4189513	Cluster_6505	Pocillopora_meandrina_HIv1___Sc0000028	4189085	4189513	429	180	94	0.8833333333333333	+	UGAACGUAUAGCCAUCCAGUUGAACUGG	16	3	170	2	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4264041-4264455	Cluster_6506	Pocillopora_meandrina_HIv1___Sc0000028	4264041	4264455	415	105	10	0.9714285714285714	+	UCCGGCCCGGACCUC	90	105	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4337321-4337736	Cluster_6507	Pocillopora_meandrina_HIv1___Sc0000028	4337321	4337736	416	237	68	0.9409282700421941	+	UGUAUCCCAACCAAGU	149	150	74	2	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4395480-4395908	Cluster_6508	Pocillopora_meandrina_HIv1___Sc0000028	4395480	4395908	429	306	85	0.19281045751633988	-	AUUGAUUCUAUUUUGUACGGCCUAGU	92	10	278	1	9	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4630292-4630705	Cluster_6509	Pocillopora_meandrina_HIv1___Sc0000028	4630292	4630705	414	96	15	1.0	+	GAAUCGGCUGUGGAUU	30	96	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4997301-4997774	Cluster_6510	Pocillopora_meandrina_HIv1___Sc0000028	4997301	4997774	474	1299	201	1.0	+	GCAGCUGAUGAAUUAAAAUU	148	901	97	167	82	31	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:241050-241477	Cluster_6511	Pocillopora_meandrina_HIv1___Sc0000029	241050	241477	428	330	137	0.9515151515151515	+	UCUGUCUCCUCUGUAAUAAUGACACUGA	56	7	314	1	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:271603-272654	Cluster_6512	Pocillopora_meandrina_HIv1___Sc0000029	271603	272654	1052	726	350	0.7465564738292011	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	24	8	668	7	4	20	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:272915-273344	Cluster_6513	Pocillopora_meandrina_HIv1___Sc0000029	272915	273344	430	604	212	0.9006622516556292	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	66	7	502	4	5	10	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:354102-354884	Cluster_6514	Pocillopora_meandrina_HIv1___Sc0000029	354102	354884	783	1922	356	0.8428720083246618	+	UUCAUGCUCUCGUUGUUCAACUGAACGAAG	288	280	1548	7	3	60	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:478823-479307	Cluster_6515	Pocillopora_meandrina_HIv1___Sc0000029	478823	479307	485	1666	234	1.0	+	UGGACAAAUUCAUAGGUCUGAUGCAAAC	264	43	1595	7	9	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:479354-479761	Cluster_6516	Pocillopora_meandrina_HIv1___Sc0000029	479354	479761	408	150	49	0.96	+	UAAGACCCAUCCAUCACUAUCAACUCG	29	1	149	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:480405-480833	Cluster_6517	Pocillopora_meandrina_HIv1___Sc0000029	480405	480833	429	181	42	0.9613259668508287	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	77	1	179	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:486033-486480	Cluster_6518	Pocillopora_meandrina_HIv1___Sc0000029	486033	486480	448	766	126	0.7506527415143603	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	142	4	748	1	0	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:488897-489351	Cluster_6519	Pocillopora_meandrina_HIv1___Sc0000029	488897	489351	455	1472	266	0.828125	+	UUUCCAACGUAUCGAAGAAAAUUUCACUGA	169	13	1383	2	11	28	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:574535-574949	Cluster_6520	Pocillopora_meandrina_HIv1___Sc0000029	574535	574949	415	78	3	1.0	+	CUUUCCGGGGUCGCG	56	78	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:958370-958779	Cluster_6521	Pocillopora_meandrina_HIv1___Sc0000029	958370	958779	410	90	29	0.044444444444444446	-	UGAAAAACUGUGACCGAGGC	25	59	3	20	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1029893-1030594	Cluster_6522	Pocillopora_meandrina_HIv1___Sc0000029	1029893	1030594	702	281	129	0.9145907473309609	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	38	5	267	1	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1031824-1032252	Cluster_6523	Pocillopora_meandrina_HIv1___Sc0000029	1031824	1032252	429	341	186	0.8211143695014663	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	21	6	304	3	2	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1036433-1036848	Cluster_6524	Pocillopora_meandrina_HIv1___Sc0000029	1036433	1036848	416	140	79	0.9285714285714286	+	UUUGAUCGGUUUUGGCGUGU	21	91	4	34	9	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1356522-1356951	Cluster_6525	Pocillopora_meandrina_HIv1___Sc0000029	1356522	1356951	430	5966	30	0.0015085484411666108	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAA	2943	139	5794	14	8	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1493958-1494373	Cluster_6526	Pocillopora_meandrina_HIv1___Sc0000029	1493958	1494373	416	1067	12	0.0028116213683223993	-	CGUGGAAGGUAGGUCC	916	1067	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1617394-1617993	Cluster_6527	Pocillopora_meandrina_HIv1___Sc0000029	1617394	1617993	600	1482	274	0.18218623481781376	-	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	471	14	1399	5	8	17	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1618347-1618896	Cluster_6528	Pocillopora_meandrina_HIv1___Sc0000029	1618347	1618896	550	212	74	0.08018867924528301	-	UAUACUCCAAAGGUUCUGAAAACGAAUG	37	2	190	2	3	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1638242-1638651	Cluster_6529	Pocillopora_meandrina_HIv1___Sc0000029	1638242	1638651	410	176	69	0.7272727272727273	.	UUGUUAACUUUGUCUACA	18	53	88	1	0	6	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1726811-1727238	Cluster_6530	Pocillopora_meandrina_HIv1___Sc0000029	1726811	1727238	428	205	87	0.9170731707317074	+	UUAAAUGGCUUGUAAUGACUAAUAAACA	37	1	202	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1727380-1728146	Cluster_6531	Pocillopora_meandrina_HIv1___Sc0000029	1727380	1728146	767	1808	537	0.8744469026548672	+	UGGAUCAAUCUGUUUUUUAUGACAAUA	109	9	1705	3	21	32	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1729528-1730826	Cluster_6532	Pocillopora_meandrina_HIv1___Sc0000029	1729528	1730826	1299	9719	1900	0.574853379977364	.	ACAUGACAAAACUACGAGCUUAGAAGA	707	98	7854	67	730	318	652	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1735799-1736225	Cluster_6533	Pocillopora_meandrina_HIv1___Sc0000029	1735799	1736225	427	97	11	0.0	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAA	57	14	82	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1983857-1984287	Cluster_6534	Pocillopora_meandrina_HIv1___Sc0000029	1983857	1984287	431	123	26	0.06504065040650407	-	UAAUUCAAACUAUUUGGACACUGGCUUCAAU	67	2	115	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1991849-1992264	Cluster_6535	Pocillopora_meandrina_HIv1___Sc0000029	1991849	1992264	416	257	8	0.01556420233463035	-	GCUGGAUGAUGAGACA	243	253	1	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2110212-2110620	Cluster_6536	Pocillopora_meandrina_HIv1___Sc0000029	2110212	2110620	409	153	91	0.0	-	UCCCACAUGGUCUAGCGGUUAGGAUUCCU	15	46	79	10	10	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2127060-2127473	Cluster_6537	Pocillopora_meandrina_HIv1___Sc0000029	2127060	2127473	414	186	136	0.0	-	UAAAUGUACUGUGGGUUGAUACACUUGCCGC	5	42	100	17	6	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2144180-2144602	Cluster_6538	Pocillopora_meandrina_HIv1___Sc0000029	2144180	2144602	423	2306	40	0.9995663486556808	+	CGGCCUGAAGAAAAAAAA	343	1473	1	318	284	227	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2159103-2159904	Cluster_6539	Pocillopora_meandrina_HIv1___Sc0000029	2159103	2159904	802	348	123	0.35344827586206895	.	UUCGCGUCUGAAGCUGUUAGAGU	84	47	18	34	29	195	25	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2406014-2406432	Cluster_6540	Pocillopora_meandrina_HIv1___Sc0000029	2406014	2406432	419	103	46	0.038834951456310676	-	UAUUGCUGAACAGACGCACA	33	81	4	7	8	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2576425-2576847	Cluster_6541	Pocillopora_meandrina_HIv1___Sc0000029	2576425	2576847	423	245	52	0.0326530612244898	-	UGGUUUUGUUAGACGAAUGAUG	46	35	2	10	125	68	5	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2755286-2755714	Cluster_6542	Pocillopora_meandrina_HIv1___Sc0000029	2755286	2755714	429	1000	98	0.999	+	AAGUUGAACAGUACAUACUUGGAGGGCA	326	7	944	1	24	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2828034-2828449	Cluster_6543	Pocillopora_meandrina_HIv1___Sc0000029	2828034	2828449	416	988	14	1.0	+	ACGGAGAACUCUUUU	753	985	1	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2865054-2865470	Cluster_6544	Pocillopora_meandrina_HIv1___Sc0000029	2865054	2865470	417	1114	33	0.004488330341113106	-	AAGUGUGCUCUUAACGG	592	1103	6	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2960057-2960471	Cluster_6545	Pocillopora_meandrina_HIv1___Sc0000029	2960057	2960471	415	169	19	0.9289940828402367	+	ACAACUUUUGACGGA	148	162	3	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3026372-3026789	Cluster_6546	Pocillopora_meandrina_HIv1___Sc0000029	3026372	3026789	418	2199	17	0.9986357435197817	+	CUUUCCGAGGUCGCA	2031	2196	1	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3051144-3051553	Cluster_6547	Pocillopora_meandrina_HIv1___Sc0000029	3051144	3051553	410	195	85	0.6410256410256411	.	UCGGUUAUAAGACGCACCCUGAAUUUUU	55	4	170	1	5	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3159055-3159478	Cluster_6548	Pocillopora_meandrina_HIv1___Sc0000029	3159055	3159478	424	151	47	0.033112582781456956	-	UUAACUGGUAGUCAUGACGUCUCC	48	6	94	0	0	2	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3198881-3199283	Cluster_6549	Pocillopora_meandrina_HIv1___Sc0000029	3198881	3199283	403	100	76	0.67	.	UGUCUCGAUGAACGCACAGCUGACG	4	26	21	16	21	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3218961-3219391	Cluster_6550	Pocillopora_meandrina_HIv1___Sc0000029	3218961	3219391	431	4617	142	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	1403	6	4608	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3310559-3310967	Cluster_6551	Pocillopora_meandrina_HIv1___Sc0000029	3310559	3310967	409	169	141	0.9940828402366864	+	AUAAAGGAUCACGAGAUAGAGAGCU	4	49	66	15	13	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3399940-3400368	Cluster_6552	Pocillopora_meandrina_HIv1___Sc0000029	3399940	3400368	429	446	20	0.002242152466367713	-	ACAUUACCGAAUGACUGUUCUAAAGAAUU	306	3	434	1	2	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3440458-3440885	Cluster_6553	Pocillopora_meandrina_HIv1___Sc0000029	3440458	3440885	428	124	42	1.0	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	20	0	123	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3518051-3518964	Cluster_6554	Pocillopora_meandrina_HIv1___Sc0000029	3518051	3518964	914	2104	599	0.24096958174904942	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	142	21	1738	14	22	200	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3632843-3633257	Cluster_6555	Pocillopora_meandrina_HIv1___Sc0000029	3632843	3633257	415	763	18	0.005242463958060288	-	CCUUCCGAGGUCGCG	487	763	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4083264-4083680	Cluster_6556	Pocillopora_meandrina_HIv1___Sc0000029	4083264	4083680	417	172	120	0.005813953488372093	-	CAAAGAUUGGUGUGUA	8	68	68	9	9	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4149965-4150380	Cluster_6557	Pocillopora_meandrina_HIv1___Sc0000029	4149965	4150380	416	155	20	0.0064516129032258064	-	GACACUCUGUCUCGUA	34	155	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4301144-4301558	Cluster_6558	Pocillopora_meandrina_HIv1___Sc0000029	4301144	4301558	415	135	5	0.0	-	UUGUUUAUGCCGUGA	112	135	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4531906-4532322	Cluster_6559	Pocillopora_meandrina_HIv1___Sc0000029	4531906	4532322	417	982	26	0.0010183299389002036	-	UGAAAAUCUUUGCUCGG	809	981	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4582445-4583042	Cluster_6560	Pocillopora_meandrina_HIv1___Sc0000029	4582445	4583042	598	641	400	0.0062402496099844	-	GAGAGAGGACGAAUUGCU	15	299	170	55	51	31	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4784120-4784526	Cluster_6561	Pocillopora_meandrina_HIv1___Sc0000029	4784120	4784526	407	132	71	0.9545454545454546	+	GCUUCUAUUACCGUCAGAUCUUUGAAGAGU	33	28	89	3	8	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:81358-81775	Cluster_6562	Pocillopora_meandrina_HIv1___Sc0000030	81358	81775	418	96	5	0.9895833333333334	+	CUUCCAAGACUCCAGACA	77	96	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:124231-124707	Cluster_6563	Pocillopora_meandrina_HIv1___Sc0000030	124231	124707	477	236	98	0.5042372881355932	.	AACGUGUCGAUUGUGAGUUUUCAC	20	10	152	2	11	18	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:125789-126216	Cluster_6564	Pocillopora_meandrina_HIv1___Sc0000030	125789	126216	428	102	30	0.0	-	UUAAAUGAGCUUUCGCGAUAACAUGAGGA	43	2	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:126305-126731	Cluster_6565	Pocillopora_meandrina_HIv1___Sc0000030	126305	126731	427	224	79	0.0	-	UCUUUCUGGAUACGGCAGCUUCUUGAA	66	16	201	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:128747-129161	Cluster_6566	Pocillopora_meandrina_HIv1___Sc0000030	128747	129161	415	339	28	0.9174041297935103	+	GCCCGGCUAGCUCCG	169	314	23	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:161973-162400	Cluster_6567	Pocillopora_meandrina_HIv1___Sc0000030	161973	162400	428	119	39	0.9495798319327731	+	UAUUUGCACUAUUGUGGAAAAUUCCUGGC	17	1	118	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:334192-334597	Cluster_6568	Pocillopora_meandrina_HIv1___Sc0000030	334192	334597	406	299	228	0.9933110367892977	+	CCAUUUGUGGAACGUCUGCUCAAGAAGGGU	5	115	100	19	26	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:334765-335299	Cluster_6569	Pocillopora_meandrina_HIv1___Sc0000030	334765	335299	535	901	331	0.9922308546059934	+	GAAGACCAACUGUUAUGUUAAUGAAGC	50	184	495	27	44	56	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:369631-370103	Cluster_6570	Pocillopora_meandrina_HIv1___Sc0000030	369631	370103	473	396	116	0.5	.	CAAGAACUCAGCUACCCUCGAUAUUUCCUU	49	7	366	2	14	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:430885-431895	Cluster_6571	Pocillopora_meandrina_HIv1___Sc0000030	430885	431895	1011	1288	297	0.5077639751552795	.	UCUUCCUUUUAUCUCCUGUCCUUUUUAGA	208	31	1151	8	10	30	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:487052-487460	Cluster_6572	Pocillopora_meandrina_HIv1___Sc0000030	487052	487460	409	142	78	0.2112676056338028	.	UGUAGACGUUUGAUCAGUAUAUCAUGAUU	12	5	127	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:512018-512447	Cluster_6573	Pocillopora_meandrina_HIv1___Sc0000030	512018	512447	430	340	94	0.15	-	AUUGAUUCUAUUUUGUACGGCCUAGU	99	7	311	3	11	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:528530-529053	Cluster_6574	Pocillopora_meandrina_HIv1___Sc0000030	528530	529053	524	1048	181	0.9895038167938931	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	356	32	912	7	2	12	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:634495-634911	Cluster_6575	Pocillopora_meandrina_HIv1___Sc0000030	634495	634911	417	136	15	0.0	-	UAAAAUUCUGAGCAGGA	83	136	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:794156-794584	Cluster_6576	Pocillopora_meandrina_HIv1___Sc0000030	794156	794584	429	195	104	0.9948717948717949	+	UGGCAAGACAGUAGAGUUAGCAUUAUGGGA	30	48	118	12	10	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:802573-802989	Cluster_6577	Pocillopora_meandrina_HIv1___Sc0000030	802573	802989	417	154	103	1.0	+	CGGCAAGACAGUAGAGUUAGCAUUAUGGG	16	28	88	13	9	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:976254-976669	Cluster_6578	Pocillopora_meandrina_HIv1___Sc0000030	976254	976669	416	1101	41	0.9990917347865577	+	AAUGUGCUCUUAACUG	363	1100	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1038302-1038717	Cluster_6579	Pocillopora_meandrina_HIv1___Sc0000030	1038302	1038717	416	160	120	0.0125	-	UACUGGCUGAGUUACGACUGUGAAA	4	59	62	12	13	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1096429-1096854	Cluster_6580	Pocillopora_meandrina_HIv1___Sc0000030	1096429	1096854	426	226	158	0.0	-	UCUGAGGAUCAAGAAUUUUGGUGUUU	8	74	92	14	18	17	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1302849-1303275	Cluster_6581	Pocillopora_meandrina_HIv1___Sc0000030	1302849	1303275	427	218	43	0.0963302752293578	-	UGAAACUCUGAUCUGAAAACAUUUGUC	75	21	190	6	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1409546-1410032	Cluster_6582	Pocillopora_meandrina_HIv1___Sc0000030	1409546	1410032	487	1517	349	0.999340804218853	+	ACACUCAUUGCUGUGUUUAUUCUUGACAUG	177	115	1259	20	24	34	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1504933-1505351	Cluster_6583	Pocillopora_meandrina_HIv1___Sc0000030	1504933	1505351	419	149	55	0.0	-	UUAGUUGUUAAAACGGCUGCUCU	17	22	15	13	43	44	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1620501-1621066	Cluster_6584	Pocillopora_meandrina_HIv1___Sc0000030	1620501	1621066	566	785	258	0.022929936305732482	-	UGACUCGUGUUAGUGCUCGGUGCUUCG	102	18	747	2	3	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1621328-1621755	Cluster_6585	Pocillopora_meandrina_HIv1___Sc0000030	1621328	1621755	428	142	74	0.06338028169014084	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	22	1	135	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1623897-1624427	Cluster_6586	Pocillopora_meandrina_HIv1___Sc0000030	1623897	1624427	531	592	228	0.010135135135135136	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	36	4	574	4	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1624548-1624978	Cluster_6587	Pocillopora_meandrina_HIv1___Sc0000030	1624548	1624978	431	611	147	0.014729950900163666	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	134	3	603	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2184565-2184991	Cluster_6588	Pocillopora_meandrina_HIv1___Sc0000030	2184565	2184991	427	214	46	0.985981308411215	+	UAAUCGUUGGCUUUUUCUCGAGACGGG	47	4	203	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2250966-2251677	Cluster_6589	Pocillopora_meandrina_HIv1___Sc0000030	2250966	2251677	712	372	135	0.7150537634408602	.	UUUUGCAGUUGAACUUAAGGAACAUAGC	45	7	325	15	2	1	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2351815-2352244	Cluster_6590	Pocillopora_meandrina_HIv1___Sc0000030	2351815	2352244	430	2038	189	0.0009813542688910696	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	735	9	2017	0	4	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2352347-2352778	Cluster_6591	Pocillopora_meandrina_HIv1___Sc0000030	2352347	2352778	432	2746	157	0.003641660597232338	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	978	1	2744	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2441886-2442311	Cluster_6592	Pocillopora_meandrina_HIv1___Sc0000030	2441886	2442311	426	99	39	0.98989898989899	+	UGUGUAGAUAUGUCUUUUGGACAGGA	30	0	98	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2443377-2443803	Cluster_6593	Pocillopora_meandrina_HIv1___Sc0000030	2443377	2443803	427	196	95	0.9489795918367347	+	UGUUCUCGGUUAUCAGCUCAGAAAUGCG	16	1	185	1	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2455657-2457394	Cluster_6594	Pocillopora_meandrina_HIv1___Sc0000030	2455657	2457394	1738	2687	1091	0.9560848529959062	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	94	21	2549	8	17	49	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2530378-2530788	Cluster_6595	Pocillopora_meandrina_HIv1___Sc0000030	2530378	2530788	411	133	69	0.47368421052631576	.	AUUCGUUUCAAUCGGGGUUUAGACGUU	17	6	116	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2535115-2535893	Cluster_6596	Pocillopora_meandrina_HIv1___Sc0000030	2535115	2535893	779	2211	551	0.23790140208050656	.	UUUUCCAUUUCGUCUUUCAGAAAGCUGAU	179	60	2007	6	15	46	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2541437-2541859	Cluster_6597	Pocillopora_meandrina_HIv1___Sc0000030	2541437	2541859	423	517	65	0.9787234042553191	+	UUCGCGUCUGAAGCUGUUAGAGU	236	47	17	6	92	343	12	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2552047-2553299	Cluster_6598	Pocillopora_meandrina_HIv1___Sc0000030	2552047	2553299	1253	13546	1101	0.03122693045917614	-	UUUGUAGGCUCUAACAGUACAUUGUU	4386	206	13066	33	37	50	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2561843-2563369	Cluster_6599	Pocillopora_meandrina_HIv1___Sc0000030	2561843	2563369	1527	18001	1876	0.04705294150324982	-	UUUGUAGGCUCUAACAGUACAUUGUU	4250	368	17050	35	69	101	378	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2574974-2575596	Cluster_6600	Pocillopora_meandrina_HIv1___Sc0000030	2574974	2575596	623	595	223	0.9983193277310924	+	UGUAUUGUAGCCGUAAGAUUCCUUUUGGAUC	115	5	572	2	2	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2575919-2576424	Cluster_6601	Pocillopora_meandrina_HIv1___Sc0000030	2575919	2576424	506	1701	223	0.9988242210464433	+	UGAAACUCUUUGUAUAAUGUACGUAUCCGG	710	9	1684	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2583026-2583561	Cluster_6602	Pocillopora_meandrina_HIv1___Sc0000030	2583026	2583561	536	297	148	0.23232323232323232	.	UACCAGAUCUAGCAAUUAUAGAAGUAUGCC	21	9	257	1	2	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2588002-2588429	Cluster_6603	Pocillopora_meandrina_HIv1___Sc0000030	2588002	2588429	428	149	46	0.9731543624161074	+	AUGUUUACCAGAGUCGAAAUGAAUCGCC	29	2	145	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2592360-2592789	Cluster_6604	Pocillopora_meandrina_HIv1___Sc0000030	2592360	2592789	430	396	148	0.9141414141414141	+	UGAUGAUAUUUCAGUGAUCACUUUUCUGUU	139	6	371	1	3	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2599239-2599668	Cluster_6605	Pocillopora_meandrina_HIv1___Sc0000030	2599239	2599668	430	121	36	0.9752066115702479	+	AACCACUGCAGAGCCAUAGAAACUUUUUGU	58	5	113	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2616697-2617207	Cluster_6606	Pocillopora_meandrina_HIv1___Sc0000030	2616697	2617207	511	476	118	0.9537815126050421	+	UGUAUCCCAACCAAGU	239	246	216	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2627661-2628089	Cluster_6607	Pocillopora_meandrina_HIv1___Sc0000030	2627661	2628089	429	231	42	0.13852813852813853	-	UAAUCGACGAAUACAAUCCAGGUAUAACC	84	5	192	1	0	19	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2666798-2667351	Cluster_6608	Pocillopora_meandrina_HIv1___Sc0000030	2666798	2667351	554	319	188	0.9843260188087775	+	CCUUAUGCCAAGACUGUGUUAAAACA	33	62	215	13	9	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2738659-2739071	Cluster_6609	Pocillopora_meandrina_HIv1___Sc0000030	2738659	2739071	413	88	10	0.9772727272727273	+	UCCGGCCCGGACCUC	58	88	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2997180-2997594	Cluster_6610	Pocillopora_meandrina_HIv1___Sc0000030	2997180	2997594	415	349	4	1.0	+	CCGCGACUGCUGCCA	344	349	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3024774-3025324	Cluster_6611	Pocillopora_meandrina_HIv1___Sc0000030	3024774	3025324	551	217	73	0.9400921658986175	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	37	6	193	1	2	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3025677-3026275	Cluster_6612	Pocillopora_meandrina_HIv1___Sc0000030	3025677	3026275	599	1459	275	0.8046607265250172	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	491	5	1381	4	9	16	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3073309-3073870	Cluster_6613	Pocillopora_meandrina_HIv1___Sc0000030	3073309	3073870	562	903	344	0.0022148394241417496	-	AGGGAUGGUGAAAUUCAUAGUUCUGAGGCA	179	166	611	28	32	36	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3271465-3271884	Cluster_6614	Pocillopora_meandrina_HIv1___Sc0000030	3271465	3271884	420	243	9	0.00823045267489712	-	GAAGUUCUGGUUUUAAAAAA	84	241	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3297488-3297913	Cluster_6615	Pocillopora_meandrina_HIv1___Sc0000030	3297488	3297913	426	191	87	0.7905759162303665	.	UCGAUUCAAAUUUGACAGUGGCGUGGUUCUU	26	21	147	10	5	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3306544-3306971	Cluster_6616	Pocillopora_meandrina_HIv1___Sc0000030	3306544	3306971	428	130	65	0.1	-	UUAUCGUAUUGCUGGUCGUCUCGUCAUCCCU	12	1	118	0	1	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3427575-3427996	Cluster_6617	Pocillopora_meandrina_HIv1___Sc0000030	3427575	3427996	422	203	43	0.009852216748768473	-	UCGAAUCCCACUCCUGACACCA	70	109	0	17	70	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3477521-3477947	Cluster_6618	Pocillopora_meandrina_HIv1___Sc0000030	3477521	3477947	427	237	48	0.02109704641350211	-	UGGUAAAAUUCUGUUCAAAGUAGGUGU	67	3	225	4	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3555015-3555433	Cluster_6619	Pocillopora_meandrina_HIv1___Sc0000030	3555015	3555433	419	932	73	0.10193133047210301	-	CAACUUUUGACGGUG	274	932	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3568440-3569612	Cluster_6620	Pocillopora_meandrina_HIv1___Sc0000030	3568440	3569612	1173	3025	670	0.3728925619834711	.	UGAUUCUGCAGACACUAAAAUAACUCCAUU	284	78	2704	16	19	86	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3772717-3773145	Cluster_6621	Pocillopora_meandrina_HIv1___Sc0000030	3772717	3773145	429	175	41	1.0	+	UCUUGCUGAGUGACUAAUGUUAGUUCGUA	82	4	162	9	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3906159-3906573	Cluster_6622	Pocillopora_meandrina_HIv1___Sc0000030	3906159	3906573	415	383	28	0.0026109660574412533	-	CUUUCCGAGGUCGAG	269	368	12	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4034894-4035309	Cluster_6623	Pocillopora_meandrina_HIv1___Sc0000030	4034894	4035309	416	104	29	0.038461538461538464	-	GUAGUCGUGGCCGAGUAA	23	91	7	1	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4047045-4047691	Cluster_6624	Pocillopora_meandrina_HIv1___Sc0000030	4047045	4047691	647	2454	366	0.09820700896495517	-	UACACUGUGCCAAAUAGCUUGCCUUAUU	278	23	2285	4	5	91	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4091846-4093102	Cluster_6625	Pocillopora_meandrina_HIv1___Sc0000030	4091846	4093102	1257	5026	1329	0.7234381217668125	.	UGUUGUCGAUUAGCUUUGGUACACAGUU	203	65	4287	33	290	121	230	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4101884-4102307	Cluster_6626	Pocillopora_meandrina_HIv1___Sc0000030	4101884	4102307	424	267	63	0.5692883895131086	.	UCUUCUAGCUCGACUUCACGCA	31	119	0	74	55	18	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4165619-4166034	Cluster_6627	Pocillopora_meandrina_HIv1___Sc0000030	4165619	4166034	416	175	19	1.0	+	UAUUAAUGCUGUAGG	76	175	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4407822-4408603	Cluster_6628	Pocillopora_meandrina_HIv1___Sc0000030	4407822	4408603	782	1536	747	0.001953125	-	UGGAAAUGAUGAAAAUUGGUUU	30	491	509	165	177	103	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4490497-4491403	Cluster_6629	Pocillopora_meandrina_HIv1___Sc0000030	4490497	4491403	907	1142	472	0.9133099824868651	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	60	19	1075	9	5	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4491505-4491924	Cluster_6630	Pocillopora_meandrina_HIv1___Sc0000030	4491505	4491924	420	173	94	0.8786127167630058	+	UGAGCUCGAACGAUCCAGUACUUUGUU	13	2	164	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4493118-4494019	Cluster_6631	Pocillopora_meandrina_HIv1___Sc0000030	4493118	4494019	902	914	322	0.9026258205689278	+	UGAGACUUGUUGUUGGGUAACUGACGUG	120	8	854	3	2	21	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4494056-4496075	Cluster_6632	Pocillopora_meandrina_HIv1___Sc0000030	4494056	4496075	2020	6272	1653	0.7871492346938775	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	469	247	5559	22	50	158	236	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4528996-4529423	Cluster_6633	Pocillopora_meandrina_HIv1___Sc0000030	4528996	4529423	428	112	20	0.9821428571428571	+	UUGUCUACGAGAAGCCUGUCCAUUUUGU	89	7	103	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4530096-4530525	Cluster_6634	Pocillopora_meandrina_HIv1___Sc0000030	4530096	4530525	430	2373	88	0.9742941424357353	+	UUAACUCCACGGUGCCAAUGACUUUCUU	797	8	2326	6	1	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:189661-190091	Cluster_6635	Pocillopora_meandrina_HIv1___Sc0000031	189661	190091	431	244	57	0.9959016393442623	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	72	4	236	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:228829-229281	Cluster_6636	Pocillopora_meandrina_HIv1___Sc0000031	228829	229281	453	981	201	0.9989806320081549	+	GACGAGGUGGCCGAGUGG	166	837	66	15	19	30	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:308440-308868	Cluster_6637	Pocillopora_meandrina_HIv1___Sc0000031	308440	308868	429	112	53	0.09821428571428571	-	AAAGUUAUGAAUAAAAGGAUCUCUGAAGUG	13	0	97	0	1	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:687296-687714	Cluster_6638	Pocillopora_meandrina_HIv1___Sc0000031	687296	687714	419	97	24	1.0	+	AAAGAAGUACAAGUGGUGA	22	84	0	13	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:840559-840994	Cluster_6639	Pocillopora_meandrina_HIv1___Sc0000031	840559	840994	436	343	245	0.008746355685131196	-	GAGGUGCUAGAACAAGACA	11	127	113	26	44	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:851738-852138	Cluster_6640	Pocillopora_meandrina_HIv1___Sc0000031	851738	852138	401	142	103	0.02112676056338028	-	AAGGUCUCCGUUGGU	7	76	29	17	6	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:852697-853125	Cluster_6641	Pocillopora_meandrina_HIv1___Sc0000031	852697	853125	429	115	35	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	48	0	105	1	1	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:855388-855797	Cluster_6642	Pocillopora_meandrina_HIv1___Sc0000031	855388	855797	410	78	43	0.21794871794871795	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	11	2	76	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:857199-857628	Cluster_6643	Pocillopora_meandrina_HIv1___Sc0000031	857199	857628	430	297	39	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	125	0	297	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:950692-951110	Cluster_6644	Pocillopora_meandrina_HIv1___Sc0000031	950692	951110	419	1683	23	0.0	-	UAUUAGUGCUGUAGGUGAA	1406	1683	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:978864-979284	Cluster_6645	Pocillopora_meandrina_HIv1___Sc0000031	978864	979284	421	81	13	0.012345679012345678	-	AGACGAAGGACUAACGCUCGAAA	22	9	0	8	16	37	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1104429-1104843	Cluster_6646	Pocillopora_meandrina_HIv1___Sc0000031	1104429	1104843	415	482	6	1.0	+	AGGAGAACGUAGGGC	466	482	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1353862-1354290	Cluster_6647	Pocillopora_meandrina_HIv1___Sc0000031	1353862	1354290	429	267	63	0.9363295880149812	+	GUGUAGAUCAGCCGACUUCAAUAUGUUU	75	24	222	3	7	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1455545-1457074	Cluster_6648	Pocillopora_meandrina_HIv1___Sc0000031	1455545	1457074	1530	2096	780	0.8730916030534351	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	99	33	1896	10	11	55	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1584679-1585097	Cluster_6649	Pocillopora_meandrina_HIv1___Sc0000031	1584679	1585097	419	16730	57	0.0	-	UCCCCGCAUCUCCACCA	11958	16730	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1782267-1782719	Cluster_6650	Pocillopora_meandrina_HIv1___Sc0000031	1782267	1782719	453	2181	232	0.9977074736359468	+	GACGAGGUGGCCGAG	356	2075	44	20	17	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1884998-1885415	Cluster_6651	Pocillopora_meandrina_HIv1___Sc0000031	1884998	1885415	418	228	37	1.0	+	CUUGAAGCGGUUGGCU	63	221	3	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1938093-1938628	Cluster_6652	Pocillopora_meandrina_HIv1___Sc0000031	1938093	1938628	536	492	155	0.24390243902439024	.	UGCAUUCUUUCUUUUCCACUGAAAUUCC	29	7	440	1	4	8	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2002024-2002452	Cluster_6653	Pocillopora_meandrina_HIv1___Sc0000031	2002024	2002452	429	503	87	0.9681908548707754	+	UACAAACAACAGAAUGUUCGAACGGCU	95	11	471	7	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2010015-2010431	Cluster_6654	Pocillopora_meandrina_HIv1___Sc0000031	2010015	2010431	417	106	49	0.10377358490566038	-	UGGAAAGUUCUGUGGUAUGCAAGUCAGC	28	3	90	2	2	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2021776-2022192	Cluster_6655	Pocillopora_meandrina_HIv1___Sc0000031	2021776	2022192	417	1136	10	1.0	+	AAGUGUGCUCUUAACU	678	1136	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2027398-2027814	Cluster_6656	Pocillopora_meandrina_HIv1___Sc0000031	2027398	2027814	417	1151	9	1.0	+	AAGUGUGCUCUUAACU	679	1151	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2041983-2042399	Cluster_6657	Pocillopora_meandrina_HIv1___Sc0000031	2041983	2042399	417	1130	14	1.0	+	AAGUGUGCUCUUAACU	666	1130	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2085244-2085653	Cluster_6658	Pocillopora_meandrina_HIv1___Sc0000031	2085244	2085653	410	174	105	0.9022988505747126	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	15	0	160	2	1	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2339148-2339563	Cluster_6659	Pocillopora_meandrina_HIv1___Sc0000031	2339148	2339563	416	217	12	1.0	+	GGGCCUGUAGCUUAGU	160	214	2	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2457665-2458080	Cluster_6660	Pocillopora_meandrina_HIv1___Sc0000031	2457665	2458080	416	140	17	0.007142857142857143	-	GGUGUGCUCUUAACGG	51	140	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2469935-2470363	Cluster_6661	Pocillopora_meandrina_HIv1___Sc0000031	2469935	2470363	429	2654	90	1.0	+	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1575	0	2644	2	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2609712-2610141	Cluster_6662	Pocillopora_meandrina_HIv1___Sc0000031	2609712	2610141	430	160	29	0.0	-	AAAAUACUGAAGUGUGCUAGUAAUGAUGAC	96	3	156	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2621728-2622157	Cluster_6663	Pocillopora_meandrina_HIv1___Sc0000031	2621728	2622157	430	2801	137	0.9996429846483399	+	GUGAUAAGAAACAUGCUCUGAGCUU	902	681	1658	117	54	221	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2642435-2642850	Cluster_6664	Pocillopora_meandrina_HIv1___Sc0000031	2642435	2642850	416	212	146	1.0	+	AUUACCGUUGCUACGCGGAUGAAGAGGCU	8	94	57	16	17	20	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2645497-2645918	Cluster_6665	Pocillopora_meandrina_HIv1___Sc0000031	2645497	2645918	422	290	205	0.993103448275862	+	GGCUAAAAGGACGUGUCACACUCAACA	6	90	107	32	16	20	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2651920-2652331	Cluster_6666	Pocillopora_meandrina_HIv1___Sc0000031	2651920	2652331	412	256	189	0.9921875	+	GUGUGGAGUCCUGUAAAACCAUUUUGGCUU	8	77	121	20	12	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2661085-2661507	Cluster_6667	Pocillopora_meandrina_HIv1___Sc0000031	2661085	2661507	423	292	209	0.9931506849315068	+	GGAUGGAGUCUGAAGAAUU	7	102	98	13	32	28	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2663002-2663419	Cluster_6668	Pocillopora_meandrina_HIv1___Sc0000031	2663002	2663419	418	290	194	0.9862068965517241	+	UUCAUGGUGACAACUUUGACUGGACA	8	125	91	26	21	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2665484-2666077	Cluster_6669	Pocillopora_meandrina_HIv1___Sc0000031	2665484	2666077	594	320	217	0.996875	+	AGGGACUGCGUGGAAAGCU	15	140	92	21	28	9	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2666313-2666858	Cluster_6670	Pocillopora_meandrina_HIv1___Sc0000031	2666313	2666858	546	328	230	0.9939024390243902	+	GACAUAGCGAUCGAUGACAUAACAU	7	83	146	35	30	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2671298-2671706	Cluster_6671	Pocillopora_meandrina_HIv1___Sc0000031	2671298	2671706	409	173	127	0.9942196531791907	+	AACGACACGGCUGGAUUGGUUAGU	5	59	59	9	12	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2671864-2672313	Cluster_6672	Pocillopora_meandrina_HIv1___Sc0000031	2671864	2672313	450	218	145	1.0	+	CGUGGCAAAAAGUUGGCUCUCA	7	49	86	14	25	24	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2679984-2680396	Cluster_6673	Pocillopora_meandrina_HIv1___Sc0000031	2679984	2680396	413	224	167	1.0	+	GCAGCGAGUAGACUGUGGCUAU	9	94	64	18	24	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2688633-2689044	Cluster_6674	Pocillopora_meandrina_HIv1___Sc0000031	2688633	2689044	412	247	193	0.9757085020242915	+	GACGACUGUGGUGAUAACUCAGAUGAAGU	6	76	96	9	23	26	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2689280-2689699	Cluster_6675	Pocillopora_meandrina_HIv1___Sc0000031	2689280	2689699	420	218	165	1.0	+	GGGACCUAUGUUCGACCACACUCUC	5	70	99	10	13	14	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2691784-2692205	Cluster_6676	Pocillopora_meandrina_HIv1___Sc0000031	2691784	2692205	422	225	129	1.0	+	CAAGAGCGGCAGUGCCUGGACU	17	82	52	13	42	22	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2693226-2693643	Cluster_6677	Pocillopora_meandrina_HIv1___Sc0000031	2693226	2693643	418	268	212	0.9925373134328358	+	GAUUUCUCUGAUGAUUGUGGUGAUGAGAG	4	89	87	24	26	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2693729-2694134	Cluster_6678	Pocillopora_meandrina_HIv1___Sc0000031	2693729	2694134	406	182	133	0.9945054945054945	+	GACAGGACCGUUGAAGGGA	6	83	44	16	9	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2694855-2695658	Cluster_6679	Pocillopora_meandrina_HIv1___Sc0000031	2694855	2695658	804	605	433	0.9950413223140496	+	AACAUCGGAUAUCUGCAGGU	11	192	219	51	61	53	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2695761-2696222	Cluster_6680	Pocillopora_meandrina_HIv1___Sc0000031	2695761	2696222	462	304	222	1.0	+	UCCGGUGCGAUAGUGGACACU	6	107	96	31	23	29	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2698211-2698629	Cluster_6681	Pocillopora_meandrina_HIv1___Sc0000031	2698211	2698629	419	266	159	0.9887218045112782	+	CAAAGGAUAUGUGCAACUGGAGUAACUCCA	12	99	92	26	9	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2700120-2700524	Cluster_6682	Pocillopora_meandrina_HIv1___Sc0000031	2700120	2700524	405	320	214	0.909375	+	CUUUCCGAAGUCGCA	15	125	120	15	19	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2701372-2701783	Cluster_6683	Pocillopora_meandrina_HIv1___Sc0000031	2701372	2701783	412	230	161	0.9869565217391304	+	GUUCGGCUGCGUCAGUGAUGGCA	5	84	81	17	12	22	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2702731-2703137	Cluster_6684	Pocillopora_meandrina_HIv1___Sc0000031	2702731	2703137	407	154	112	1.0	+	AUGGCUGCAGGGAACU	7	73	37	17	4	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2703836-2704285	Cluster_6685	Pocillopora_meandrina_HIv1___Sc0000031	2703836	2704285	450	289	172	0.9965397923875432	+	CAGUCAGGGACCUUGCGACU	13	130	50	34	25	27	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2704509-2704956	Cluster_6686	Pocillopora_meandrina_HIv1___Sc0000031	2704509	2704956	448	373	282	1.0	+	AUAUGCAGAACGUGUGGAGCAAAGUU	6	131	148	19	32	21	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2705918-2706347	Cluster_6687	Pocillopora_meandrina_HIv1___Sc0000031	2705918	2706347	430	327	202	0.9938837920489296	+	ACCCGGCUAGCUCAG	19	129	93	26	36	21	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2706831-2707232	Cluster_6688	Pocillopora_meandrina_HIv1___Sc0000031	2706831	2707232	402	321	251	0.9906542056074766	+	GAUCGGAUCAAGACAACUAUUGAAGGU	9	115	135	13	25	14	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2708475-2708898	Cluster_6689	Pocillopora_meandrina_HIv1___Sc0000031	2708475	2708898	424	301	221	0.9966777408637874	+	GAACAUGGUCUAUGUCUGUACU	6	82	143	25	19	19	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2710378-2710796	Cluster_6690	Pocillopora_meandrina_HIv1___Sc0000031	2710378	2710796	419	325	237	0.9907692307692307	+	AAAAUGACUGUGGAGACAACU	11	105	102	38	17	33	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2713483-2713891	Cluster_6691	Pocillopora_meandrina_HIv1___Sc0000031	2713483	2713891	409	186	124	1.0	+	UCUGGAAAUCGAGAG	15	88	36	21	11	23	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2714892-2715406	Cluster_6692	Pocillopora_meandrina_HIv1___Sc0000031	2714892	2715406	515	436	234	0.9977064220183486	+	CAGGACUGUACUGAUGGCGAAGAUGAACUC	70	113	233	21	23	22	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2718804-2719218	Cluster_6693	Pocillopora_meandrina_HIv1___Sc0000031	2718804	2719218	415	316	245	0.990506329113924	+	GCAUCCGACUGUGGCCGGC	8	151	74	28	22	21	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2719463-2720010	Cluster_6694	Pocillopora_meandrina_HIv1___Sc0000031	2719463	2720010	548	372	234	0.9946236559139785	+	AACGGUGUGGAUUGCCAGAGAGCU	9	144	124	32	20	18	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2723553-2723968	Cluster_6695	Pocillopora_meandrina_HIv1___Sc0000031	2723553	2723968	416	149	104	0.9731543624161074	+	AAUUACAACGGUGCAAGAUGUCAGAACUGUA	5	38	63	14	12	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2724658-2725074	Cluster_6696	Pocillopora_meandrina_HIv1___Sc0000031	2724658	2725074	417	179	114	0.9888268156424581	+	CUUCUGACUAUGUCGGCCAACGAUGUGACA	21	47	97	9	9	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2728505-2728923	Cluster_6697	Pocillopora_meandrina_HIv1___Sc0000031	2728505	2728923	419	227	161	0.9955947136563876	+	GAAAACGAGACUAGAAGAACAUUGCUGUCU	5	56	94	26	22	15	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3008660-3009316	Cluster_6698	Pocillopora_meandrina_HIv1___Sc0000031	3008660	3009316	657	2213	764	0.0031631269769543608	-	GUUGUGAUCACUGGAGUAGUUAGGACAGU	72	906	753	138	104	156	156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3010334-3010901	Cluster_6699	Pocillopora_meandrina_HIv1___Sc0000031	3010334	3010901	568	1157	432	0.000864304235090752	-	ACCUUCCCUUUAAAAGCACCACACU	100	227	640	42	80	83	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3146487-3146910	Cluster_6700	Pocillopora_meandrina_HIv1___Sc0000031	3146487	3146910	424	128	57	0.1015625	-	UGUUGCAUACAAGAUCUCCUGGUUGUAAGA	25	0	120	0	5	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3147356-3148464	Cluster_6701	Pocillopora_meandrina_HIv1___Sc0000031	3147356	3148464	1109	961	475	0.29552549427679503	.	GAUGAGGCUCAUAAA	61	84	835	4	6	10	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3160689-3161116	Cluster_6702	Pocillopora_meandrina_HIv1___Sc0000031	3160689	3161116	428	108	9	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	64	0	108	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3163105-3164114	Cluster_6703	Pocillopora_meandrina_HIv1___Sc0000031	3163105	3164114	1010	1030	278	0.9349514563106797	+	UCAAAUACAACACCAAAAGAC	226	47	678	267	4	9	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3181659-3182061	Cluster_6704	Pocillopora_meandrina_HIv1___Sc0000031	3181659	3182061	403	113	70	0.6902654867256637	.	UUGUCGGGAUAUGUAGUUGCA	12	42	7	44	17	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3190505-3190919	Cluster_6705	Pocillopora_meandrina_HIv1___Sc0000031	3190505	3190919	415	238	174	0.004201680672268907	-	CCUCUGUAGAUUAGUAAAUGGGCU	8	85	69	18	11	32	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3198438-3198858	Cluster_6706	Pocillopora_meandrina_HIv1___Sc0000031	3198438	3198858	421	95	28	0.0	-	AAGGGCAAGGAUGACAAUUACAUU	26	8	10	5	16	25	31	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3273943-3274358	Cluster_6707	Pocillopora_meandrina_HIv1___Sc0000031	3273943	3274358	416	630	16	0.0	-	CGAGUUAGAUAGAAUA	599	618	10	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3318396-3318825	Cluster_6708	Pocillopora_meandrina_HIv1___Sc0000031	3318396	3318825	430	216	54	0.7175925925925926	.	UAGUGUUUGUAUUGUUGGAAUAAAUGGUCA	41	16	185	10	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3335148-3335573	Cluster_6709	Pocillopora_meandrina_HIv1___Sc0000031	3335148	3335573	426	171	76	0.9883040935672515	+	UGAUUGACGUACGGUAUUUGAGACGC	18	3	157	2	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3369381-3369798	Cluster_6710	Pocillopora_meandrina_HIv1___Sc0000031	3369381	3369798	418	151	50	0.0	-	UAAUAUGUGAUGAACUUA	48	89	60	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3548527-3549546	Cluster_6711	Pocillopora_meandrina_HIv1___Sc0000031	3548527	3549546	1020	4900	730	0.19510204081632654	-	UGUAAGUGCAUCUGUUGACUUUUGAAGA	1744	38	4464	19	208	68	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3551577-3552004	Cluster_6712	Pocillopora_meandrina_HIv1___Sc0000031	3551577	3552004	428	188	67	0.0851063829787234	-	UUAAAUGGCUUGUAAUGACUAAUAAACA	46	0	183	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3648357-3648774	Cluster_6713	Pocillopora_meandrina_HIv1___Sc0000031	3648357	3648774	418	304	16	0.9901315789473685	+	GCUACUUUGACCUCACU	174	302	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3651114-3651647	Cluster_6714	Pocillopora_meandrina_HIv1___Sc0000031	3651114	3651647	534	822	253	0.0012165450121654502	-	UUUGCCCUUAGAGGUGUUGCUCUUCA	84	77	371	45	85	173	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3673549-3673974	Cluster_6715	Pocillopora_meandrina_HIv1___Sc0000031	3673549	3673974	426	172	81	0.03488372093023256	-	UGACACCAUAGUGCUCUAACUUCUGUAA	16	3	155	1	6	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3832189-3832605	Cluster_6716	Pocillopora_meandrina_HIv1___Sc0000031	3832189	3832605	417	112	14	0.11607142857142858	-	CGGCCUGAAAAAAAAAA	56	112	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3863646-3864063	Cluster_6717	Pocillopora_meandrina_HIv1___Sc0000031	3863646	3864063	418	84	33	0.9523809523809523	+	CCAGGACAUAUUUUCGUUAACCGGUACACC	21	13	52	1	2	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3872540-3872947	Cluster_6718	Pocillopora_meandrina_HIv1___Sc0000031	3872540	3872947	408	157	107	0.4012738853503185	.	UCUUCUCUUUUGUGCGGACA	9	90	15	31	16	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3882014-3882836	Cluster_6719	Pocillopora_meandrina_HIv1___Sc0000031	3882014	3882836	823	629	96	0.9952305246422893	+	CCAGGAUAUAGAAUGUUGGUUUGCACUGC	140	8	535	3	4	6	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3894259-3894687	Cluster_6720	Pocillopora_meandrina_HIv1___Sc0000031	3894259	3894687	429	245	67	0.9673469387755103	+	UGCAUGUGCUUUGUCUUGGAUUUCAUAGU	44	11	225	1	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3894807-3895216	Cluster_6721	Pocillopora_meandrina_HIv1___Sc0000031	3894807	3895216	410	150	68	0.7733333333333333	.	UGUUACAAAACCAUUAGAACUAUCAGUU	24	3	126	3	0	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3896115-3897020	Cluster_6722	Pocillopora_meandrina_HIv1___Sc0000031	3896115	3897020	906	2102	494	0.7901998097050428	.	UCCUGACAUGAUUCUUUGAGUUCUUUC	232	49	1882	20	18	40	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3902209-3902722	Cluster_6723	Pocillopora_meandrina_HIv1___Sc0000031	3902209	3902722	514	4419	356	0.9239646978954514	+	UUAUAUCUUCGGUCAAAAAGUGCACUUU	1228	9	4274	10	6	10	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4007449-4007866	Cluster_6724	Pocillopora_meandrina_HIv1___Sc0000031	4007449	4007866	418	391	11	0.017902813299232736	-	CGGCCUGAAAAAAAAAA	273	389	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4019453-4019988	Cluster_6725	Pocillopora_meandrina_HIv1___Sc0000031	4019453	4019988	536	3005	443	0.00033277870216306157	-	AUCCUCCUUUGUUCCAGUGGCUGUGUU	480	240	2357	50	64	67	227	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4163166-4163585	Cluster_6726	Pocillopora_meandrina_HIv1___Sc0000031	4163166	4163585	420	87	27	1.0	+	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	27	1	85	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4501137-4501681	Cluster_6727	Pocillopora_meandrina_HIv1___Sc0000031	4501137	4501681	545	2874	398	0.9986082115518441	+	UUUGCCUUGAUAAGUGUUGCUCUGUCA	439	149	2143	26	132	361	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:4495-5713	Cluster_6728	Pocillopora_meandrina_HIv1___Sc0000032	4495	5713	1219	7882	733	0.919817305252474	+	UGACGGAAAAGCGAUUCUCCCCUGACAAGGC	1899	57	7422	24	22	209	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:35625-36051	Cluster_6729	Pocillopora_meandrina_HIv1___Sc0000032	35625	36051	427	329	102	0.9513677811550152	+	UGACUAUUCAACAGCUGUUCUUCUACCA	55	4	297	1	5	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:554647-555065	Cluster_6730	Pocillopora_meandrina_HIv1___Sc0000032	554647	555065	419	136	56	0.9485294117647058	+	UGAAAAACUGUGACCG	13	84	4	21	22	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:591284-591713	Cluster_6731	Pocillopora_meandrina_HIv1___Sc0000032	591284	591713	430	293	72	0.051194539249146756	-	UGAACAAGUGAGCAAGAUGAUCUUCAUGAA	107	2	284	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:592847-593274	Cluster_6732	Pocillopora_meandrina_HIv1___Sc0000032	592847	593274	428	112	38	0.03571428571428571	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	18	0	106	3	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:680956-681371	Cluster_6733	Pocillopora_meandrina_HIv1___Sc0000032	680956	681371	416	209	13	0.004784688995215311	-	AUAGAAUGAUGAUGCA	178	203	0	5	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:705796-706224	Cluster_6734	Pocillopora_meandrina_HIv1___Sc0000032	705796	706224	429	192	53	0.09375	-	AUCUAAACGAACUUGUUUUUCUUAUGAACA	55	3	176	0	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:732298-734035	Cluster_6735	Pocillopora_meandrina_HIv1___Sc0000032	732298	734035	1738	2726	1102	0.046221570066030816	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	109	24	2591	11	26	36	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:906845-907303	Cluster_6736	Pocillopora_meandrina_HIv1___Sc0000032	906845	907303	459	4378	294	0.9990863407948835	+	GGGGAUGUAGCUCAGUGGU	1159	2743	1115	113	73	73	261	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:976624-977084	Cluster_6737	Pocillopora_meandrina_HIv1___Sc0000032	976624	977084	461	271	186	0.01107011070110701	-	GUACUGUGGAAAAUGCU	7	110	76	31	21	19	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:977545-977958	Cluster_6738	Pocillopora_meandrina_HIv1___Sc0000032	977545	977958	414	252	175	0.0	-	GGCAAGCAGUUGGAAGAUGGACGUACC	12	90	96	17	22	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:978627-979053	Cluster_6739	Pocillopora_meandrina_HIv1___Sc0000032	978627	979053	427	200	130	0.0	-	CUCUGACUGGGAAGACCAU	10	89	59	14	8	15	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1022749-1023800	Cluster_6740	Pocillopora_meandrina_HIv1___Sc0000032	1022749	1023800	1052	698	346	0.7793696275071633	.	UGAUCAUAUAUUAUUCUAUCUGGAGA	30	6	651	5	4	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1024061-1024490	Cluster_6741	Pocillopora_meandrina_HIv1___Sc0000032	1024061	1024490	430	577	195	0.9133448873483535	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	90	4	480	2	2	11	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1036766-1037180	Cluster_6742	Pocillopora_meandrina_HIv1___Sc0000032	1036766	1037180	415	102	8	0.0	-	CUUUCCGAGGUCGCA	89	101	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1084086-1085480	Cluster_6743	Pocillopora_meandrina_HIv1___Sc0000032	1084086	1085480	1395	16712	6116	0.999162278602202	+	GAUCUGGAUGAGAAUUGCU	120	6109	5902	1112	1411	1094	1084	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1118221-1118745	Cluster_6744	Pocillopora_meandrina_HIv1___Sc0000032	1118221	1118745	525	427	168	0.09601873536299765	-	UUGGACCAAGAUAGGCUGCUUUAGCAAGU	27	12	400	3	3	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1287751-1288194	Cluster_6745	Pocillopora_meandrina_HIv1___Sc0000032	1287751	1288194	444	343	179	0.9912536443148688	+	GGAGAGAAGUCCUUUGAAUCCUUUGAAAGA	22	50	242	15	8	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1289450-1289886	Cluster_6746	Pocillopora_meandrina_HIv1___Sc0000032	1289450	1289886	437	205	140	1.0	+	GUUUAGCUGCGAUGUAUUUUCUGUG	7	63	78	22	15	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1290726-1291993	Cluster_6747	Pocillopora_meandrina_HIv1___Sc0000032	1290726	1291993	1268	1221	693	0.9983619983619983	+	CUCGGAAAUUUUGCAAAGAAACUGACAA	20	475	421	62	95	101	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1292775-1293294	Cluster_6748	Pocillopora_meandrina_HIv1___Sc0000032	1292775	1293294	520	739	515	0.9972936400541272	+	GGAAACUGAAGGCUCAGCACGGUG	7	244	268	56	64	55	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1293439-1293865	Cluster_6749	Pocillopora_meandrina_HIv1___Sc0000032	1293439	1293865	427	408	302	1.0	+	UAAGAACCUCUUCCCCCA	7	130	179	19	29	19	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1332113-1332533	Cluster_6750	Pocillopora_meandrina_HIv1___Sc0000032	1332113	1332533	421	103	26	1.0	+	UCGGUAGAAUCCUUAACAAA	21	22	77	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1333095-1333525	Cluster_6751	Pocillopora_meandrina_HIv1___Sc0000032	1333095	1333525	431	334	63	0.9970059880239521	+	CAUAAUCUGACACUUUACCUCGCCUUUAGUU	71	3	325	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1334774-1335201	Cluster_6752	Pocillopora_meandrina_HIv1___Sc0000032	1334774	1335201	428	101	32	0.9900990099009901	+	UGUGCCAAAGGUUUAGAACGAAAGAACG	32	0	98	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1335767-1336197	Cluster_6753	Pocillopora_meandrina_HIv1___Sc0000032	1335767	1336197	431	551	99	1.0	+	CACCAAAACUGUACACAUCAACCUUAAAA	151	6	526	2	2	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1336657-1337342	Cluster_6754	Pocillopora_meandrina_HIv1___Sc0000032	1336657	1337342	686	703	260	0.9630156472261735	+	UUCUAUGGUAUGCAAGUCAGCAUGACUCAGC	54	36	646	3	4	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1338475-1339347	Cluster_6755	Pocillopora_meandrina_HIv1___Sc0000032	1338475	1339347	873	1170	266	0.9871794871794872	+	UCGGAUAUAAGGCGGUUAUCAAGCGCUCA	127	16	1119	6	6	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1553445-1553862	Cluster_6756	Pocillopora_meandrina_HIv1___Sc0000032	1553445	1553862	418	3159	55	0.0006331117442228553	-	GAGAUUGCUGUAGGCU	927	3158	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1645915-1646410	Cluster_6757	Pocillopora_meandrina_HIv1___Sc0000032	1645915	1646410	496	1561	297	0.9737347853939782	+	AAUGGGAAAACGAGAACAGCGUGA	184	39	922	27	21	240	312	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1728758-1729173	Cluster_6758	Pocillopora_meandrina_HIv1___Sc0000032	1728758	1729173	416	132	71	0.030303030303030304	-	AGAGUUUUGAAGUAAAUCGGCGAAUCGUUU	11	1	115	0	2	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1742365-1742793	Cluster_6759	Pocillopora_meandrina_HIv1___Sc0000032	1742365	1742793	429	286	110	0.25524475524475526	.	UUAUUUCCUUCUCAACUGUCCGUCACC	28	15	210	7	14	27	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1830044-1830459	Cluster_6760	Pocillopora_meandrina_HIv1___Sc0000032	1830044	1830459	416	109	12	0.08256880733944955	-	CCCCGCAUCUCCACCG	79	105	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1873092-1873504	Cluster_6761	Pocillopora_meandrina_HIv1___Sc0000032	1873092	1873504	413	116	80	0.0	-	CGCGGGUUAGACUGUGCU	12	71	30	6	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1891335-1891764	Cluster_6762	Pocillopora_meandrina_HIv1___Sc0000032	1891335	1891764	430	94	12	0.9893617021276596	+	GGUAAAUCCAUUGGAGAGAUUUGAGCUCGUG	71	7	86	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1959359-1959775	Cluster_6763	Pocillopora_meandrina_HIv1___Sc0000032	1959359	1959775	417	548	27	0.0	-	GUUGGGGCGGUGUUCC	313	542	6	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1972904-1973319	Cluster_6764	Pocillopora_meandrina_HIv1___Sc0000032	1972904	1973319	416	694	36	0.0	-	AACUUUUGACGGGGG	503	690	1	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1997294-1997768	Cluster_6765	Pocillopora_meandrina_HIv1___Sc0000032	1997294	1997768	475	7526	556	0.9994685091682168	+	GCGACAGUGGUGUAACGGUUAUCAUGGC	1205	3169	3686	58	151	271	191	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2061737-2062151	Cluster_6766	Pocillopora_meandrina_HIv1___Sc0000032	2061737	2062151	415	80	3	1.0	+	CGGGAUGUAGCGCAGU	43	80	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2121789-2122217	Cluster_6767	Pocillopora_meandrina_HIv1___Sc0000032	2121789	2122217	429	103	17	0.9902912621359223	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	47	0	103	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2230250-2230655	Cluster_6768	Pocillopora_meandrina_HIv1___Sc0000032	2230250	2230655	406	193	92	0.26424870466321243	.	UCUUCAUAAUGUCUCUAGGCCUCGCUU	17	8	146	3	21	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2274256-2274682	Cluster_6769	Pocillopora_meandrina_HIv1___Sc0000032	2274256	2274682	427	183	109	0.08196721311475409	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	19	2	171	2	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2345793-2346198	Cluster_6770	Pocillopora_meandrina_HIv1___Sc0000032	2345793	2346198	406	194	127	0.8195876288659794	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	12	3	174	2	0	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2346303-2346719	Cluster_6771	Pocillopora_meandrina_HIv1___Sc0000032	2346303	2346719	417	293	193	0.9419795221843004	+	UCAGACACGUGGAUACUUGCGAUGAAGU	17	1	272	0	6	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2347077-2347498	Cluster_6772	Pocillopora_meandrina_HIv1___Sc0000032	2347077	2347498	422	230	110	0.9478260869565217	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	16	1	217	2	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2348233-2348659	Cluster_6773	Pocillopora_meandrina_HIv1___Sc0000032	2348233	2348659	427	163	57	0.7055214723926381	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	29	1	133	1	2	2	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2375641-2376069	Cluster_6774	Pocillopora_meandrina_HIv1___Sc0000032	2375641	2376069	429	247	95	0.6882591093117408	.	GUUGACGUGAACGGUGUUAGAUGCCGAGC	45	2	234	1	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2376095-2376521	Cluster_6775	Pocillopora_meandrina_HIv1___Sc0000032	2376095	2376521	427	331	176	0.23867069486404835	.	UCCAACUCUGUUCCAGGUGACA	13	8	269	5	21	17	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2378160-2378587	Cluster_6776	Pocillopora_meandrina_HIv1___Sc0000032	2378160	2378587	428	171	68	0.07017543859649122	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	35	0	162	0	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2412513-2412940	Cluster_6777	Pocillopora_meandrina_HIv1___Sc0000032	2412513	2412940	428	198	76	0.9747474747474747	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	92	3	188	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2414696-2415381	Cluster_6778	Pocillopora_meandrina_HIv1___Sc0000032	2414696	2415381	686	420	231	0.8	+	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	32	5	355	3	7	14	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2415529-2415942	Cluster_6779	Pocillopora_meandrina_HIv1___Sc0000032	2415529	2415942	414	211	153	0.7914691943127962	.	UUUUACCUCCAUCCGGCGAUUGUAACCAAU	12	5	184	0	5	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2416192-2416613	Cluster_6780	Pocillopora_meandrina_HIv1___Sc0000032	2416192	2416613	422	242	107	0.731404958677686	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	33	8	215	5	5	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2453613-2454032	Cluster_6781	Pocillopora_meandrina_HIv1___Sc0000032	2453613	2454032	420	159	88	0.07547169811320754	-	UGACGUCACGAUCUUUGCGCGCUACCAUU	19	7	143	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2461526-2463349	Cluster_6782	Pocillopora_meandrina_HIv1___Sc0000032	2461526	2463349	1824	26505	3075	0.06496887379739671	-	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2238	278	25106	75	129	354	563	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2596196-2596611	Cluster_6783	Pocillopora_meandrina_HIv1___Sc0000032	2596196	2596611	416	436	34	0.0	-	CUGUGAAUAGGCGGUA	278	436	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2788210-2789661	Cluster_6784	Pocillopora_meandrina_HIv1___Sc0000032	2788210	2789661	1452	1812	827	0.43653421633554085	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	104	37	1458	19	15	102	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2789881-2790538	Cluster_6785	Pocillopora_meandrina_HIv1___Sc0000032	2789881	2790538	658	1172	355	0.08703071672354949	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	107	7	1108	4	3	27	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2790590-2791202	Cluster_6786	Pocillopora_meandrina_HIv1___Sc0000032	2790590	2791202	613	548	237	0.13138686131386862	-	UCUGCGUAAAAGAUUUCUUCACUGAGU	82	17	481	4	7	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2880680-2881094	Cluster_6787	Pocillopora_meandrina_HIv1___Sc0000032	2880680	2881094	415	151	11	0.0	-	GAGACUUGAAGCGGC	85	149	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3114106-3114517	Cluster_6788	Pocillopora_meandrina_HIv1___Sc0000032	3114106	3114517	412	140	84	0.12142857142857143	-	UCUGGAGUCUCGGUC	10	65	60	1	5	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3128253-3128667	Cluster_6789	Pocillopora_meandrina_HIv1___Sc0000032	3128253	3128667	415	77	7	0.987012987012987	+	GUUGACCUCGGAUCA	45	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3147841-3148258	Cluster_6790	Pocillopora_meandrina_HIv1___Sc0000032	3147841	3148258	418	321	16	0.9906542056074766	+	UAUUAAUGCUGUAGGCUU	256	315	5	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3170645-3171054	Cluster_6791	Pocillopora_meandrina_HIv1___Sc0000032	3170645	3171054	410	185	104	0.11891891891891893	-	UAUUCCAAGAUUGGCCGUACCAGAGACA	20	2	174	4	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3217472-3217899	Cluster_6792	Pocillopora_meandrina_HIv1___Sc0000032	3217472	3217899	428	96	29	0.03125	-	AAAGAACCCGGUCACCUGUGCUGCAAAGG	38	1	85	4	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3385327-3385741	Cluster_6793	Pocillopora_meandrina_HIv1___Sc0000032	3385327	3385741	415	84	8	0.9642857142857143	+	CGGGGGCGUGUUGUC	64	84	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3521771-3522185	Cluster_6794	Pocillopora_meandrina_HIv1___Sc0000032	3521771	3522185	415	171	14	1.0	+	AUUGGAUCCGGCCCA	141	166	3	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:64932-65347	Cluster_6795	Pocillopora_meandrina_HIv1___Sc0000033	64932	65347	416	135	11	0.0	-	UUGACAACUUUUGACA	65	134	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:189713-190129	Cluster_6796	Pocillopora_meandrina_HIv1___Sc0000033	189713	190129	417	1460	55	0.9986301369863013	+	AACUUUUGACGGUGG	744	1454	4	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:205780-206208	Cluster_6797	Pocillopora_meandrina_HIv1___Sc0000033	205780	206208	429	116	38	0.0	-	AUGCAGUUGAAGAAACUAGUUAGACAAGG	25	5	107	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:352602-353035	Cluster_6798	Pocillopora_meandrina_HIv1___Sc0000033	352602	353035	434	18992	502	0.9981571187868576	+	UACAACGGGGACUAGCUCCGAUCUCUCAAG	2999	92	18865	13	4	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:510947-511358	Cluster_6799	Pocillopora_meandrina_HIv1___Sc0000033	510947	511358	412	82	16	0.9878048780487805	+	ACUGCUGCCGGUCGUG	43	82	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:512579-513003	Cluster_6800	Pocillopora_meandrina_HIv1___Sc0000033	512579	513003	425	140	74	0.9928571428571429	+	AUAGUGGCACCGACUUUGAAGUAUGGAUU	8	5	130	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:534254-534684	Cluster_6801	Pocillopora_meandrina_HIv1___Sc0000033	534254	534684	431	354	77	0.011299435028248588	-	UGGCUGGGAACCAACCUCGGAGAAAAUGAC	73	14	305	11	1	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:534887-535315	Cluster_6802	Pocillopora_meandrina_HIv1___Sc0000033	534887	535315	429	134	34	0.0	-	AGCAUUUCCCGAGGGUCUGACUUACGACA	35	2	131	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:542928-544164	Cluster_6803	Pocillopora_meandrina_HIv1___Sc0000033	542928	544164	1237	5184	1085	0.11496913580246913	-	UAUUUGAUCUGUCUACCUCUUUAAAGGA	261	306	4463	180	53	45	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:586365-586785	Cluster_6804	Pocillopora_meandrina_HIv1___Sc0000033	586365	586785	421	127	31	0.9763779527559056	+	UUGGAUAUCCUAACACGUGUGA	32	28	1	24	63	10	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:588868-589295	Cluster_6805	Pocillopora_meandrina_HIv1___Sc0000033	588868	589295	428	154	54	0.006493506493506494	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	47	1	151	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:601778-602205	Cluster_6806	Pocillopora_meandrina_HIv1___Sc0000033	601778	602205	428	144	43	0.013888888888888888	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	39	2	138	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:614818-615245	Cluster_6807	Pocillopora_meandrina_HIv1___Sc0000033	614818	615245	428	136	35	0.007352941176470588	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	40	1	134	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:640337-640764	Cluster_6808	Pocillopora_meandrina_HIv1___Sc0000033	640337	640764	428	151	53	0.013245033112582781	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	42	3	144	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:659174-659761	Cluster_6809	Pocillopora_meandrina_HIv1___Sc0000033	659174	659761	588	3699	407	0.9840497431738308	+	UGUAGAAUCAAUCUGUUACUAAGACACC	636	22	3561	65	8	24	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:660541-660951	Cluster_6810	Pocillopora_meandrina_HIv1___Sc0000033	660541	660951	411	184	121	0.782608695652174	.	UAUACCUUUGAUUCAUAGCCUUUCUGAUU	8	3	154	2	3	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:661527-662065	Cluster_6811	Pocillopora_meandrina_HIv1___Sc0000033	661527	662065	539	548	201	0.8029197080291971	+	UGUAUUCACUUGGGUUAACUCUUCCACA	112	2	532	1	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:670512-670940	Cluster_6812	Pocillopora_meandrina_HIv1___Sc0000033	670512	670940	429	398	59	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	119	0	395	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:677264-677694	Cluster_6813	Pocillopora_meandrina_HIv1___Sc0000033	677264	677694	431	327	56	0.01834862385321101	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	109	3	317	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:683227-683663	Cluster_6814	Pocillopora_meandrina_HIv1___Sc0000033	683227	683663	437	51566	719	7.757049218477291e-05	-	AGCAUUUCCCGAAGGUCUGACAUACGAC	11308	225	50932	132	127	68	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:703744-704547	Cluster_6815	Pocillopora_meandrina_HIv1___Sc0000033	703744	704547	804	231	53	0.0	-	UGCAAAAGAAGACGCUUGGCUGGGAACCA	56	1	226	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:719371-719799	Cluster_6816	Pocillopora_meandrina_HIv1___Sc0000033	719371	719799	429	97	20	0.0	-	UGCAAAAGAAGACGCUUGGCUGGGAACCA	61	2	94	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:719973-720403	Cluster_6817	Pocillopora_meandrina_HIv1___Sc0000033	719973	720403	431	966	109	0.0	-	AGCAUUUCCCGAAGGUCUGACAUACGAC	169	3	958	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:743365-743782	Cluster_6818	Pocillopora_meandrina_HIv1___Sc0000033	743365	743782	418	134	70	0.8731343283582089	+	GAGUAGAUCAGCCGACUUCAACAUGUUU	19	4	117	2	4	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:747341-747769	Cluster_6819	Pocillopora_meandrina_HIv1___Sc0000033	747341	747769	429	240	53	0.004166666666666667	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	73	2	235	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:778352-778780	Cluster_6820	Pocillopora_meandrina_HIv1___Sc0000033	778352	778780	429	731	86	0.9699042407660738	+	GUGUAGAUCAGCCGACUUCAACAUGUUC	152	20	571	4	28	42	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:789485-789913	Cluster_6821	Pocillopora_meandrina_HIv1___Sc0000033	789485	789913	429	232	56	0.004310344827586207	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	57	0	231	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:794098-794535	Cluster_6822	Pocillopora_meandrina_HIv1___Sc0000033	794098	794535	438	291	105	0.013745704467353952	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	42	3	282	0	0	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:809830-810258	Cluster_6823	Pocillopora_meandrina_HIv1___Sc0000033	809830	810258	429	225	52	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	63	2	222	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:819636-820064	Cluster_6824	Pocillopora_meandrina_HIv1___Sc0000033	819636	820064	429	214	51	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	51	0	212	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:831472-831899	Cluster_6825	Pocillopora_meandrina_HIv1___Sc0000033	831472	831899	428	140	37	1.0	+	AGCAUUUCCCGAGGGUCUAACAUACGAC	34	0	137	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:848924-849351	Cluster_6826	Pocillopora_meandrina_HIv1___Sc0000033	848924	849351	428	165	28	0.9818181818181818	+	UGAAUCGUCGAUGAGAGUGAAUAAUACU	85	2	160	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:864987-865401	Cluster_6827	Pocillopora_meandrina_HIv1___Sc0000033	864987	865401	415	110	7	0.03636363636363636	-	UCUGGAGUCUCGGCA	103	107	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1073974-1074484	Cluster_6828	Pocillopora_meandrina_HIv1___Sc0000033	1073974	1074484	511	2921	450	0.018829168093118794	-	GGUCCGUUAGCUCAG	431	2583	130	75	65	43	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1123428-1123881	Cluster_6829	Pocillopora_meandrina_HIv1___Sc0000033	1123428	1123881	454	1361	100	0.0014695077149155032	-	UUUGCUAGUUGCUUUUGUCCCGUU	355	39	45	35	49	568	625	24	N	spi-mir-temp-25_Stylophora_pistillata_Liew_et_al._2014_Considered_bona_fideas_close_match_to_nve-_and_hma-miR-2022.;Adi-Mir-2022_3p_Acropora_digitifera_Gajigan_&_Conaco_2017_nve-miR-2022-3p;_nve-miR-2022-3p;_spi-miR-temp-25;eca-nve-F-miR-2022_Edwardsiella_carnea_Praher_et_al._2021_Transcriptome-level;ami-nve-F-miR-2022-3p_Acropora_millepora_Praher_et_al._2021_NA
Pocillopora_meandrina_HIv1___Sc0000033:1435427-1435837	Cluster_6830	Pocillopora_meandrina_HIv1___Sc0000033	1435427	1435837	411	132	70	0.4318181818181818	.	CACCCGGUCAAUUUUGCGUCAAAAAUAAUUU	12	8	104	6	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1528802-1529229	Cluster_6831	Pocillopora_meandrina_HIv1___Sc0000033	1528802	1529229	428	180	103	0.8944444444444445	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	26	3	167	1	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1641803-1642213	Cluster_6832	Pocillopora_meandrina_HIv1___Sc0000033	1641803	1642213	411	110	65	0.990909090909091	+	UGCUCAUAUCUAAUAGAACUACUGCCGUU	17	0	105	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1652824-1653254	Cluster_6833	Pocillopora_meandrina_HIv1___Sc0000033	1652824	1653254	431	647	179	0.9799072642967542	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	152	2	623	1	5	12	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1653605-1654020	Cluster_6834	Pocillopora_meandrina_HIv1___Sc0000033	1653605	1654020	416	147	80	0.9183673469387755	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	23	0	138	1	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1655295-1655800	Cluster_6835	Pocillopora_meandrina_HIv1___Sc0000033	1655295	1655800	506	601	229	0.5074875207986689	.	UAAGUCUGUAACCCCUGUGGCAC	163	3	333	10	6	222	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1687808-1688227	Cluster_6836	Pocillopora_meandrina_HIv1___Sc0000033	1687808	1688227	420	465	71	0.9956989247311828	+	CACUCUCAUGACCACUUU	65	459	0	6	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1689820-1690239	Cluster_6837	Pocillopora_meandrina_HIv1___Sc0000033	1689820	1690239	420	131	47	0.09923664122137404	-	CCGGGCUACUUCUUCGCAGU	35	82	5	21	1	18	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1752364-1752775	Cluster_6838	Pocillopora_meandrina_HIv1___Sc0000033	1752364	1752775	412	86	32	0.9418604651162791	+	UGAUAUAUGUUCAUGUUUGGGUGUAAGC	24	5	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1935370-1935788	Cluster_6839	Pocillopora_meandrina_HIv1___Sc0000033	1935370	1935788	419	10560	24	0.999905303030303	+	ACCCCGCAUCUCCACCA	5787	10560	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2087740-2088163	Cluster_6840	Pocillopora_meandrina_HIv1___Sc0000033	2087740	2088163	424	189	92	0.9682539682539683	+	UCAAAAGCUGCCGAUAAAUCUAAA	33	2	138	2	1	3	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2088176-2088602	Cluster_6841	Pocillopora_meandrina_HIv1___Sc0000033	2088176	2088602	427	169	94	0.8520710059171598	+	UCAGACUAGCAACAUGAUCUUCGGUGA	26	2	157	0	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2089469-2090403	Cluster_6842	Pocillopora_meandrina_HIv1___Sc0000033	2089469	2090403	935	992	336	0.9465725806451613	+	UAAUGACUUCAGAGUAGACAGAGACGGU	82	7	957	8	1	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2227624-2228244	Cluster_6843	Pocillopora_meandrina_HIv1___Sc0000033	2227624	2228244	621	798	176	0.681704260651629	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	131	3	652	1	5	114	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2528641-2529053	Cluster_6844	Pocillopora_meandrina_HIv1___Sc0000033	2528641	2529053	413	117	66	0.1452991452991453	-	UUCUAGACGAGAUCUUUAGUAAAAAGCA	12	27	61	14	8	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2557559-2557973	Cluster_6845	Pocillopora_meandrina_HIv1___Sc0000033	2557559	2557973	415	133	11	0.007518796992481203	-	UUUGUCUGAGGCUGA	112	131	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2647969-2648391	Cluster_6846	Pocillopora_meandrina_HIv1___Sc0000033	2647969	2648391	423	261	156	0.9808429118773946	+	GAUCAAAGUUGGCCG	12	101	84	21	23	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2718101-2718522	Cluster_6847	Pocillopora_meandrina_HIv1___Sc0000033	2718101	2718522	422	326	247	0.0	-	UGAGUAUGUAGACAUUAAGAGACU	5	78	124	29	31	23	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2718874-2719527	Cluster_6848	Pocillopora_meandrina_HIv1___Sc0000033	2718874	2719527	654	657	472	0.0091324200913242	-	AAUGACGAGAAUCGAUGAAUACGUGGACGU	12	191	309	32	40	35	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2866423-2867925	Cluster_6849	Pocillopora_meandrina_HIv1___Sc0000033	2866423	2867925	1503	1769	780	0.047484454494064444	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	55	16	1647	11	26	27	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2891328-2891743	Cluster_6850	Pocillopora_meandrina_HIv1___Sc0000033	2891328	2891743	416	142	7	0.9859154929577465	+	GAGUGUGCUCUUAGCA	136	142	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2894610-2895027	Cluster_6851	Pocillopora_meandrina_HIv1___Sc0000033	2894610	2895027	418	134	14	0.9776119402985075	+	GACUUUUGACGGUGGAU	35	134	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2910222-2910663	Cluster_6852	Pocillopora_meandrina_HIv1___Sc0000033	2910222	2910663	442	553	131	0.22784810126582278	.	UGUCAAAUUCUCGUCUUCCUAACCUUU	176	10	521	1	3	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2921411-2921823	Cluster_6853	Pocillopora_meandrina_HIv1___Sc0000033	2921411	2921823	413	79	34	0.9240506329113924	+	UGUUGAACCCCUGGCAC	17	42	28	1	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3000626-3001042	Cluster_6854	Pocillopora_meandrina_HIv1___Sc0000033	3000626	3001042	417	239	29	0.0	-	AACUUUUGACGGCGGA	51	239	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3079769-3080198	Cluster_6855	Pocillopora_meandrina_HIv1___Sc0000033	3079769	3080198	430	206	81	0.0	-	UGUCUGAACUCUAAAACUUCAUUUGGGAUC	39	6	198	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3082788-3083402	Cluster_6856	Pocillopora_meandrina_HIv1___Sc0000033	3082788	3083402	615	660	253	0.3803030303030303	.	UGCAAGAACAAGUUCGCGACGUGGUAUU	105	23	592	14	7	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3084271-3084715	Cluster_6857	Pocillopora_meandrina_HIv1___Sc0000033	3084271	3084715	445	583	220	0.0017152658662092624	-	UGAAAUAAGAAAUCUUGUAAAGCGACUGAUA	43	10	559	0	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3084987-3085943	Cluster_6858	Pocillopora_meandrina_HIv1___Sc0000033	3084987	3085943	957	2046	456	0.013685239491691105	-	UUGGACUUCUUUGCUUCACCUGAGGCAGC	217	11	1979	5	14	15	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3086920-3087460	Cluster_6859	Pocillopora_meandrina_HIv1___Sc0000033	3086920	3087460	541	1589	289	0.006922592825676526	-	UCACUCACGAUAGAAUUUUAAACAGAU	194	3	1565	0	3	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3093993-3096069	Cluster_6860	Pocillopora_meandrina_HIv1___Sc0000033	3093993	3096069	2077	14502	2157	0.04916563232657564	-	UGUUAGCUCGUCGACCUGAACGCCACUUUC	1514	485	13346	43	156	207	265	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3096364-3096844	Cluster_6861	Pocillopora_meandrina_HIv1___Sc0000033	3096364	3096844	481	418	231	0.03349282296650718	-	UGAUUUUUGUUCUUUUUGUUGAGGCUGCA	18	2	397	0	5	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3096865-3097773	Cluster_6862	Pocillopora_meandrina_HIv1___Sc0000033	3096865	3097773	909	1458	438	0.003429355281207133	-	UAAGACAAGUACUUCAAACACUCUCUAGUAG	122	11	1401	6	6	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3098436-3101538	Cluster_6863	Pocillopora_meandrina_HIv1___Sc0000033	3098436	3101538	3103	9125	2478	0.16931506849315067	-	UGUUAAAUCUCCUCUAAACUUUGUAAUGA	373	243	7806	124	104	435	413	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3101625-3102135	Cluster_6864	Pocillopora_meandrina_HIv1___Sc0000033	3101625	3102135	511	7784	686	0.21891058581706063	.	UGAUUUCUCUGAUAUUACCAUCAGCGC	927	90	7098	34	286	119	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3102350-3102782	Cluster_6865	Pocillopora_meandrina_HIv1___Sc0000033	3102350	3102782	433	3148	260	0.01747141041931385	-	UGCACUAAGCAAUGAUUUGUCACCUGAAUU	1020	28	3092	1	3	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3102834-3103842	Cluster_6866	Pocillopora_meandrina_HIv1___Sc0000033	3102834	3103842	1009	1228	397	0.013029315960912053	-	UAAAACGAUAUUGCUGACAGAAAAAUAACA	116	18	1174	5	8	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3103948-3104677	Cluster_6867	Pocillopora_meandrina_HIv1___Sc0000033	3103948	3104677	730	3363	624	0.004162949747249479	-	UGAUCAAUCAAGGAAAAUGUCUCGUACUGUU	294	19	3284	2	9	16	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3104763-3110347	Cluster_6868	Pocillopora_meandrina_HIv1___Sc0000033	3104763	3110347	5585	31070	5699	0.007016414547795301	-	UGCAAAGUCCCAUAUAUCCAUUGUAACAUU	1648	435	29647	187	206	309	286	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3110696-3111545	Cluster_6869	Pocillopora_meandrina_HIv1___Sc0000033	3110696	3111545	850	1538	381	0.38296488946684004	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	176	17	1480	8	3	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3111595-3112752	Cluster_6870	Pocillopora_meandrina_HIv1___Sc0000033	3111595	3112752	1158	2442	921	0.0012285012285012285	-	UUACCGGUUUGAUGCCAAGACAUUUGA	109	41	2234	26	36	57	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3112803-3117488	Cluster_6871	Pocillopora_meandrina_HIv1___Sc0000033	3112803	3117488	4686	62471	6357	0.0015527204622945046	-	UAGGUGCUGCCCUGCAAAUUCCCAUAUAUC	5157	3808	54270	707	1067	1433	1186	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3117976-3118918	Cluster_6872	Pocillopora_meandrina_HIv1___Sc0000033	3117976	3118918	943	27170	750	0.007029812292970188	-	UGCUAUCAACUUAAAUUUAUGAACCUCACU	10576	184	26197	116	116	323	234	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3119235-3125163	Cluster_6873	Pocillopora_meandrina_HIv1___Sc0000033	3119235	3125163	5929	89352	6996	0.0009736771420897125	-	UAGGUGCUGCCCUGCAAAUUCCCAUAUAUC	17696	6961	78397	908	911	1270	905	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3125753-3126547	Cluster_6874	Pocillopora_meandrina_HIv1___Sc0000033	3125753	3126547	795	1822	491	0.0	-	UGAUCUAACUGAUGUUGACUCAUUCUGAC	109	18	1735	6	17	28	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3126776-3127230	Cluster_6875	Pocillopora_meandrina_HIv1___Sc0000033	3126776	3127230	455	324	154	0.0030864197530864196	-	UGAGGACUUUGCAUCAGAAAAGACAGUUGUU	33	10	296	7	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3127267-3129880	Cluster_6876	Pocillopora_meandrina_HIv1___Sc0000033	3127267	3129880	2614	8062	1846	0.0018605805011163482	-	UAUCAGCAAAGUGAAGAUAAUGUAGAACCUA	843	382	7399	38	47	107	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3130174-3130636	Cluster_6877	Pocillopora_meandrina_HIv1___Sc0000033	3130174	3130636	463	378	156	0.007936507936507936	-	UCAUCCGACCUUUCGAAAUCUAGCUUGUU	41	16	359	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:33075-33504	Cluster_6878	Pocillopora_meandrina_HIv1___Sc0000034	33075	33504	430	805	109	0.006211180124223602	-	ACUGUGUACGAACUCUGUCAAAUGGAUGA	168	14	706	2	5	36	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:106992-107419	Cluster_6879	Pocillopora_meandrina_HIv1___Sc0000034	106992	107419	428	155	46	0.9483870967741935	+	UUCAUGCUCUCGUUGUUCGACUGAACG	32	0	155	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:167436-167927	Cluster_6880	Pocillopora_meandrina_HIv1___Sc0000034	167436	167927	492	35462	1315	0.00025379279228469914	-	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	9497	3820	31011	73	111	319	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:215119-215548	Cluster_6881	Pocillopora_meandrina_HIv1___Sc0000034	215119	215548	430	522	128	0.07279693486590039	-	UGCAGUAGCUUUGAAAUCGUUGGCGGGU	66	7	493	1	3	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:217331-217746	Cluster_6882	Pocillopora_meandrina_HIv1___Sc0000034	217331	217746	416	198	37	0.010101010101010102	-	UUGUUCUAAGAUUUGU	73	158	39	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:218602-219029	Cluster_6883	Pocillopora_meandrina_HIv1___Sc0000034	218602	219029	428	186	53	0.026881720430107527	-	UUUGAGACAUAAACUGUUCAGUUUGAGC	79	2	181	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:233015-234459	Cluster_6884	Pocillopora_meandrina_HIv1___Sc0000034	233015	234459	1445	4326	1346	0.7133610725843735	.	UGCGACUUUCCUUUUCUUUGGCACAA	203	71	3839	27	37	111	241	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:234969-235374	Cluster_6885	Pocillopora_meandrina_HIv1___Sc0000034	234969	235374	406	215	130	0.004651162790697674	-	UCGGCUAACGUUAAACUUCACAGCGUUCUUU	14	4	206	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:236155-236577	Cluster_6886	Pocillopora_meandrina_HIv1___Sc0000034	236155	236577	423	276	141	0.06159420289855073	-	UUGGACAACCUCAUGAGAGUAACCCUCGUC	20	15	244	2	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:251674-252102	Cluster_6887	Pocillopora_meandrina_HIv1___Sc0000034	251674	252102	429	158	79	0.08860759493670886	-	UUAGAUCAAUGACUUCUGAGAUGAUGCCUU	13	4	145	3	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:252438-252864	Cluster_6888	Pocillopora_meandrina_HIv1___Sc0000034	252438	252864	427	190	60	0.05263157894736842	-	UUGAAUGUUUUCUGCACUGUAGAGAAGAC	24	6	168	1	5	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:254737-255177	Cluster_6889	Pocillopora_meandrina_HIv1___Sc0000034	254737	255177	441	211	90	0.4881516587677725	.	UGAAGACAUAGUAGAAAGAUCACU	20	21	134	0	2	5	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:264353-264780	Cluster_6890	Pocillopora_meandrina_HIv1___Sc0000034	264353	264780	428	180	86	0.0	-	UAACGAUCUUGCUGUCGCUGUUGGGAGC	19	5	168	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:268956-269690	Cluster_6891	Pocillopora_meandrina_HIv1___Sc0000034	268956	269690	735	380	149	0.02631578947368421	-	UAAAUGGCCAUUAUUGAUCUCAGUACAUC	33	8	354	0	7	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:273601-274030	Cluster_6892	Pocillopora_meandrina_HIv1___Sc0000034	273601	274030	430	266	59	0.8834586466165414	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	119	6	226	2	0	2	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:281232-281664	Cluster_6893	Pocillopora_meandrina_HIv1___Sc0000034	281232	281664	433	3508	201	0.00028506271379703536	-	UGAACAGACUUGAUGACUACUGCAUAUGCUU	981	3	3494	1	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:284152-284563	Cluster_6894	Pocillopora_meandrina_HIv1___Sc0000034	284152	284563	412	121	62	0.01652892561983471	-	UGUGUCGACGAUAGUAACACCAGCUUGAGG	8	6	115	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:300245-301292	Cluster_6895	Pocillopora_meandrina_HIv1___Sc0000034	300245	301292	1048	4571	660	0.001968934587617589	-	UGACAGCUGGCUCUUCUGAGCAUUUAGGAG	512	134	4301	52	15	22	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:304345-304926	Cluster_6896	Pocillopora_meandrina_HIv1___Sc0000034	304345	304926	582	445	185	0.03146067415730337	-	UGUAAAGACGUUUUGAGGCUUUGGAGACA	40	9	416	4	3	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:306994-307423	Cluster_6897	Pocillopora_meandrina_HIv1___Sc0000034	306994	307423	430	331	114	0.00906344410876133	-	UGAUCAACCAGUAUCGAACAGGAUUUAAGU	87	7	315	0	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:309422-309848	Cluster_6898	Pocillopora_meandrina_HIv1___Sc0000034	309422	309848	427	331	154	0.00906344410876133	-	UGUUCUGUGUUCGUUCUCUGUGAAGGC	34	10	310	2	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:309881-310309	Cluster_6899	Pocillopora_meandrina_HIv1___Sc0000034	309881	310309	429	416	147	0.009615384615384616	-	UUCUUGUCGCCACUUCUCCCACUGUGGGC	119	18	391	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:310314-311240	Cluster_6900	Pocillopora_meandrina_HIv1___Sc0000034	310314	311240	927	2164	526	0.0013863216266173752	-	UGUGAGACAUUGUGAAUCUUCUGACAGCUGC	170	23	2108	6	7	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:311485-311999	Cluster_6901	Pocillopora_meandrina_HIv1___Sc0000034	311485	311999	515	603	149	0.13432835820895522	-	UUCAUUGUGAGGAGAUGAUUCGGUGUUA	84	83	503	4	6	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:377601-378031	Cluster_6902	Pocillopora_meandrina_HIv1___Sc0000034	377601	378031	431	930	136	0.9473118279569892	+	UGAGACAGUACACACGAUUUGAUAUA	213	4	904	1	3	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:408804-409230	Cluster_6903	Pocillopora_meandrina_HIv1___Sc0000034	408804	409230	427	155	61	0.3032258064516129	.	UGUGUGCAGUUUUCUCUAAUCUUGUUU	20	0	137	0	1	2	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:443822-444250	Cluster_6904	Pocillopora_meandrina_HIv1___Sc0000034	443822	444250	429	190	39	0.9947368421052631	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	80	0	172	0	0	2	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:564007-564436	Cluster_6905	Pocillopora_meandrina_HIv1___Sc0000034	564007	564436	430	3307	178	0.0003023888720895071	-	UGGAACAUGGUAGGAGAGUGCAUGCAGG	769	62	3164	7	20	17	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:674187-674617	Cluster_6906	Pocillopora_meandrina_HIv1___Sc0000034	674187	674617	431	263	119	0.9961977186311787	+	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	46	4	253	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:832826-833649	Cluster_6907	Pocillopora_meandrina_HIv1___Sc0000034	832826	833649	824	1947	110	0.007190549563430919	-	UUGGACUGUGCAUAACCAUUUGU	1101	11	712	0	38	1137	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:864097-864526	Cluster_6908	Pocillopora_meandrina_HIv1___Sc0000034	864097	864526	430	100	25	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	41	0	98	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:909162-909585	Cluster_6909	Pocillopora_meandrina_HIv1___Sc0000034	909162	909585	424	96	27	0.84375	+	AGCAUGACGAAGGUUAGAGAUCGAC	35	0	64	0	2	5	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1151290-1151705	Cluster_6910	Pocillopora_meandrina_HIv1___Sc0000034	1151290	1151705	416	615	10	0.0016260162601626016	-	CGCGGGGUAGAGCAGU	507	613	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1411821-1412247	Cluster_6911	Pocillopora_meandrina_HIv1___Sc0000034	1411821	1412247	427	78	16	0.0	-	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	47	0	78	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1690392-1690810	Cluster_6912	Pocillopora_meandrina_HIv1___Sc0000034	1690392	1690810	419	471	19	0.010615711252653927	-	UAUUAAUGCUGUAGGUGAU	193	469	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1758628-1759046	Cluster_6913	Pocillopora_meandrina_HIv1___Sc0000034	1758628	1759046	419	79	33	1.0	+	GCUAGUUGGACACAUAUGUAG	12	17	31	14	10	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2059786-2060212	Cluster_6914	Pocillopora_meandrina_HIv1___Sc0000034	2059786	2060212	427	257	138	0.8365758754863813	+	UGAGUCGAGGUUAUUCACAAUACGAGC	53	2	225	3	2	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2060450-2061107	Cluster_6915	Pocillopora_meandrina_HIv1___Sc0000034	2060450	2061107	658	1188	361	0.8838383838383839	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	122	18	1084	5	5	41	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2061327-2061780	Cluster_6916	Pocillopora_meandrina_HIv1___Sc0000034	2061327	2061780	454	416	193	0.5673076923076923	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	30	5	400	1	2	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2061906-2062548	Cluster_6917	Pocillopora_meandrina_HIv1___Sc0000034	2061906	2062548	643	567	279	0.8148148148148148	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	90	12	508	5	5	9	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2161718-2162203	Cluster_6918	Pocillopora_meandrina_HIv1___Sc0000034	2161718	2162203	486	387	172	0.7209302325581395	.	UAAGACGCACUCUACUCUGUUGUCAAUAC	43	25	314	6	3	26	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2221418-2221853	Cluster_6919	Pocillopora_meandrina_HIv1___Sc0000034	2221418	2221853	436	1718	361	1.0	+	GUCUCCCCUUGUCAGAGUGUAUGAAGU	211	169	1294	45	33	93	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2262728-2263202	Cluster_6920	Pocillopora_meandrina_HIv1___Sc0000034	2262728	2263202	475	383	141	0.005221932114882507	-	UCUCGGUGGGACCUCC	37	197	145	7	11	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2306697-2307111	Cluster_6921	Pocillopora_meandrina_HIv1___Sc0000034	2306697	2307111	415	2722	8	0.0007347538574577516	-	CUUUCCGAGGUCACG	2709	2721	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2382669-2383084	Cluster_6922	Pocillopora_meandrina_HIv1___Sc0000034	2382669	2383084	416	182	61	0.005494505494505495	-	GGCUGACUUUGGUGGA	103	148	18	4	9	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2440729-2441146	Cluster_6923	Pocillopora_meandrina_HIv1___Sc0000034	2440729	2441146	418	122	58	0.5983606557377049	.	CCAAUACCGAAACAACAUAGAUGAACUAACA	15	1	113	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2515370-2515784	Cluster_6924	Pocillopora_meandrina_HIv1___Sc0000034	2515370	2515784	415	85	12	0.8823529411764706	+	CCUUUCCGAGGUCGA	69	78	3	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2581784-2582380	Cluster_6925	Pocillopora_meandrina_HIv1___Sc0000034	2581784	2582380	597	5599	527	0.9964279335595642	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	835	27	5518	6	6	11	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2626176-2626698	Cluster_6926	Pocillopora_meandrina_HIv1___Sc0000034	2626176	2626698	523	888	183	0.9662162162162162	+	UUGUGUGUUUGGCUGGAGCAUCUGCGGC	138	25	818	9	3	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2727977-2728401	Cluster_6927	Pocillopora_meandrina_HIv1___Sc0000034	2727977	2728401	425	87	37	0.9770114942528736	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	28	1	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2746578-2747174	Cluster_6928	Pocillopora_meandrina_HIv1___Sc0000034	2746578	2747174	597	5633	480	0.9953843422687733	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	864	9	5575	5	6	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2812994-2813594	Cluster_6929	Pocillopora_meandrina_HIv1___Sc0000034	2812994	2813594	601	2766	291	0.9808387563268257	+	UAUCAUGGUCUAAAAUUGGUGCUUCAGUU	845	4	2724	0	5	13	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2821751-2822178	Cluster_6930	Pocillopora_meandrina_HIv1___Sc0000034	2821751	2822178	428	239	96	0.0041841004184100415	-	UGAGUGUCUUGAAAGUUCUGUCUGGUC	38	5	231	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2830459-2830887	Cluster_6931	Pocillopora_meandrina_HIv1___Sc0000034	2830459	2830887	429	155	21	0.0	-	UGUUAACCAGUGUUUAGUUGGCAGUGUGG	61	1	153	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2836051-2836477	Cluster_6932	Pocillopora_meandrina_HIv1___Sc0000034	2836051	2836477	427	173	88	0.1907514450867052	-	UCUAUCGGGAAAUCUCAAUGCAUGGAGC	21	1	155	1	1	11	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2850194-2850828	Cluster_6933	Pocillopora_meandrina_HIv1___Sc0000034	2850194	2850828	635	643	303	0.9409020217729394	+	UAAUCAUUACAAAACUCUCUGACUCUGG	20	16	603	2	3	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2851262-2853851	Cluster_6934	Pocillopora_meandrina_HIv1___Sc0000034	2851262	2853851	2590	8346	2028	0.8662832494608196	+	UGAAUAAACGAGCCAAGGGAAAUCCUGA	391	124	7701	40	60	105	316	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2867937-2868716	Cluster_6935	Pocillopora_meandrina_HIv1___Sc0000034	2867937	2868716	780	277	121	0.6642599277978339	.	UACGUAAUCUAACCCUUGCAAUGACUUGC	30	6	209	0	3	27	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2904544-2905250	Cluster_6936	Pocillopora_meandrina_HIv1___Sc0000034	2904544	2905250	707	437	107	0.9862700228832952	+	UAGGACAACUGAGAAUCCACGUAGACUC	116	3	425	0	6	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2907196-2907622	Cluster_6937	Pocillopora_meandrina_HIv1___Sc0000034	2907196	2907622	427	169	61	0.9112426035502958	+	UGCUUGAAUUCUGCCGAACUGUACUGC	45	3	155	0	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2908286-2909080	Cluster_6938	Pocillopora_meandrina_HIv1___Sc0000034	2908286	2909080	795	2386	589	0.8667225481978206	+	UCCGUAUAUGAAUGUAUCGUCUGCAAU	251	166	2122	16	6	37	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2910217-2910645	Cluster_6939	Pocillopora_meandrina_HIv1___Sc0000034	2910217	2910645	429	222	124	0.8153153153153153	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	23	1	197	0	1	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2937155-2937903	Cluster_6940	Pocillopora_meandrina_HIv1___Sc0000034	2937155	2937903	749	854	371	0.02224824355971897	-	UAAGUAAGUAGACAUGGAUAGGCCUUGA	46	13	820	5	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2946021-2946444	Cluster_6941	Pocillopora_meandrina_HIv1___Sc0000034	2946021	2946444	424	83	11	0.9759036144578314	+	UAACCCGAGAACUGACACGUGAGUAGUC	57	0	73	0	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2950488-2950915	Cluster_6942	Pocillopora_meandrina_HIv1___Sc0000034	2950488	2950915	428	106	19	0.9811320754716981	+	UAACCCGAGAACUGACACGUGAGUAGUC	60	2	93	1	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2954955-2955382	Cluster_6943	Pocillopora_meandrina_HIv1___Sc0000034	2954955	2955382	428	100	13	0.99	+	UAACCCGAGAACUGACACGUGAGUAGUC	72	0	90	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2959422-2959849	Cluster_6944	Pocillopora_meandrina_HIv1___Sc0000034	2959422	2959849	428	111	20	0.9819819819819819	+	UAACCCGAGAACUGACACGUGAGUAGUC	70	0	103	0	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2963889-2964316	Cluster_6945	Pocillopora_meandrina_HIv1___Sc0000034	2963889	2964316	428	104	16	0.9711538461538461	+	UAACCCGAGAACUGACACGUGAGUAGUC	64	0	91	1	0	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2976051-2976606	Cluster_6946	Pocillopora_meandrina_HIv1___Sc0000034	2976051	2976606	556	3386	496	0.9855286473715298	+	UGUACGUGCUCGUGAUCUCGUAAUGCUGAC	410	30	3302	6	6	12	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2982324-2982752	Cluster_6947	Pocillopora_meandrina_HIv1___Sc0000034	2982324	2982752	429	247	124	0.728744939271255	.	UACGCUUAAACUUUUCCUUGAUCAAUUUGA	17	9	204	2	8	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3000361-3000809	Cluster_6948	Pocillopora_meandrina_HIv1___Sc0000034	3000361	3000809	449	371	67	0.5121293800539084	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	108	3	367	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3068438-3068854	Cluster_6949	Pocillopora_meandrina_HIv1___Sc0000034	3068438	3068854	417	111	55	0.8198198198198198	+	UAACAUCGAACUGGACCUAAAUUUAAGC	11	19	77	9	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3069260-3069686	Cluster_6950	Pocillopora_meandrina_HIv1___Sc0000034	3069260	3069686	427	147	58	0.9795918367346939	+	UUGACCGGGUGGAAAUAAGAGAGACAGC	18	10	123	1	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:64573-65002	Cluster_6951	Pocillopora_meandrina_HIv1___Sc0000035	64573	65002	430	441	103	0.19501133786848074	-	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	182	2	428	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:67998-68407	Cluster_6952	Pocillopora_meandrina_HIv1___Sc0000035	67998	68407	410	118	49	0.2288135593220339	.	UCGAAGAUACAAACAUAUGAACCAGCA	18	0	115	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:144281-144705	Cluster_6953	Pocillopora_meandrina_HIv1___Sc0000035	144281	144705	425	153	65	0.9019607843137255	+	UAACACAAUGAACCAAGGCACGUCCAGA	19	5	135	0	0	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:148904-149783	Cluster_6954	Pocillopora_meandrina_HIv1___Sc0000035	148904	149783	880	1007	354	0.8123138033763655	+	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	92	14	941	6	4	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:214892-215320	Cluster_6955	Pocillopora_meandrina_HIv1___Sc0000035	214892	215320	429	149	34	1.0	+	AUUGCAAGCAAACGGCUCGGAGUCUUCUU	35	8	138	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:218978-219411	Cluster_6956	Pocillopora_meandrina_HIv1___Sc0000035	218978	219411	434	1024	161	0.9970703125	+	AUUGCAAACAAACGGCUACGAGUCUUCUUC	220	45	808	12	8	4	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:220024-220453	Cluster_6957	Pocillopora_meandrina_HIv1___Sc0000035	220024	220453	430	211	65	0.990521327014218	+	AUUGUAAGCCUUCUUCGUGCAAACCUGA	52	22	177	1	3	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:271304-271753	Cluster_6958	Pocillopora_meandrina_HIv1___Sc0000035	271304	271753	450	242	94	0.9752066115702479	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	24	6	230	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:271912-272396	Cluster_6959	Pocillopora_meandrina_HIv1___Sc0000035	271912	272396	485	335	201	0.8656716417910447	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	20	4	293	3	2	13	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:272673-275080	Cluster_6960	Pocillopora_meandrina_HIv1___Sc0000035	272673	275080	2408	4256	1404	0.9271616541353384	+	UGUACAACCAUCCGAUACUCUUGU	674	32	2996	15	24	82	1107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:275353-276534	Cluster_6961	Pocillopora_meandrina_HIv1___Sc0000035	275353	276534	1182	1626	708	0.7890528905289053	.	CUUUCCGAGGUCGCGA	98	186	1343	6	16	20	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:277387-278553	Cluster_6962	Pocillopora_meandrina_HIv1___Sc0000035	277387	278553	1167	1345	581	0.8646840148698884	+	UACAAUAACCUCUGAUUUCACUAAAUG	61	13	1243	7	15	21	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:282145-282573	Cluster_6963	Pocillopora_meandrina_HIv1___Sc0000035	282145	282573	429	313	54	0.9968051118210862	+	AUUGCAAGCGAACGGCUAGGAGUCUUCUU	112	18	285	2	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:307392-307929	Cluster_6964	Pocillopora_meandrina_HIv1___Sc0000035	307392	307929	538	339	131	0.8053097345132744	+	UGCAUGUGCUUUGUCUUGGAUUUCAUAGU	20	22	299	1	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:307939-308348	Cluster_6965	Pocillopora_meandrina_HIv1___Sc0000035	307939	308348	410	108	46	0.7685185185185185	.	UGUUACAAAACCAUUAGAACUAUCAGU	18	3	87	0	3	0	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:309346-309764	Cluster_6966	Pocillopora_meandrina_HIv1___Sc0000035	309346	309764	419	120	59	0.275	.	UAUGCAUUCAAUGAUCGUGGUCGG	24	0	55	3	4	10	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:309813-310471	Cluster_6967	Pocillopora_meandrina_HIv1___Sc0000035	309813	310471	659	255	134	0.5137254901960784	.	UAUGCAUUCAAUGAUCGUGGUCGG	25	3	183	0	3	11	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:412062-412557	Cluster_6968	Pocillopora_meandrina_HIv1___Sc0000035	412062	412557	496	944	275	0.1440677966101695	-	AAUGGGAAAACGAGAACAGCGUGA	67	24	612	16	17	93	182	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:578022-578474	Cluster_6969	Pocillopora_meandrina_HIv1___Sc0000035	578022	578474	453	230	78	0.9826086956521739	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	28	2	226	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:578632-579116	Cluster_6970	Pocillopora_meandrina_HIv1___Sc0000035	578632	579116	485	358	218	0.8324022346368715	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	29	5	313	2	4	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:579393-581800	Cluster_6971	Pocillopora_meandrina_HIv1___Sc0000035	579393	581800	2408	4112	1402	0.9214494163424124	+	UGUACAACCAUCCGAUACUCUUGU	639	48	2905	15	22	70	1052	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:582073-583254	Cluster_6972	Pocillopora_meandrina_HIv1___Sc0000035	582073	583254	1182	1664	713	0.8233173076923077	+	CUUUCCGAGGUCGCGA	88	177	1397	7	19	24	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:583270-583699	Cluster_6973	Pocillopora_meandrina_HIv1___Sc0000035	583270	583699	430	373	198	0.4879356568364611	.	UGCAAUGGUCUGCAGGUUCGUAGGAUG	15	23	307	7	6	3	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:584116-585285	Cluster_6974	Pocillopora_meandrina_HIv1___Sc0000035	584116	585285	1170	3843	884	0.8852459016393442	+	UGCUAACACGGGACGAUUUGGAUGAAGCC	408	57	3561	22	38	44	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:593477-593906	Cluster_6975	Pocillopora_meandrina_HIv1___Sc0000035	593477	593906	430	1775	63	1.0	+	AUUGCAAGCAAACGGCUAGGAGUCUUCUU	1173	0	1773	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:667123-667543	Cluster_6976	Pocillopora_meandrina_HIv1___Sc0000035	667123	667543	421	103	41	1.0	+	UAAGUUGAUCUCGGUUGUCGAAAGGCAGUA	20	0	103	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:672253-672704	Cluster_6977	Pocillopora_meandrina_HIv1___Sc0000035	672253	672704	452	209	82	0.03349282296650718	-	UGAACACGCGUACUUGUAAUUAUGAAAUG	28	3	203	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:676390-676792	Cluster_6978	Pocillopora_meandrina_HIv1___Sc0000035	676390	676792	403	102	63	0.8529411764705882	+	UAAGACGCACUCUACUCUGUUGUCAAUAC	13	4	89	4	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:677759-678185	Cluster_6979	Pocillopora_meandrina_HIv1___Sc0000035	677759	678185	427	165	71	0.20606060606060606	.	UGUACUGUUUGUAUUUUUUUUCCUGGG	36	0	151	3	5	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:757961-758385	Cluster_6980	Pocillopora_meandrina_HIv1___Sc0000035	757961	758385	425	113	35	0.008849557522123894	-	UACUGGUGCGAUGCAACUCUCGAUA	36	2	97	9	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:763025-763445	Cluster_6981	Pocillopora_meandrina_HIv1___Sc0000035	763025	763445	421	135	54	0.9925925925925926	+	UUCGAGCGUAAGCCCUUCUCCA	19	6	10	18	42	40	19	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:954470-955072	Cluster_6982	Pocillopora_meandrina_HIv1___Sc0000035	954470	955072	603	698	185	0.050143266475644696	-	UCUGUAAACUCCGUAUUUAAUAACAAUUAA	86	10	663	4	1	1	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:964606-965035	Cluster_6983	Pocillopora_meandrina_HIv1___Sc0000035	964606	965035	430	175	42	0.9942857142857143	+	UACUCUUCAAAAAAAUCUCUGGAACCAAGA	78	1	174	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:981170-981716	Cluster_6984	Pocillopora_meandrina_HIv1___Sc0000035	981170	981716	547	2502	133	0.9632294164668266	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	667	7	2487	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1000950-1001371	Cluster_6985	Pocillopora_meandrina_HIv1___Sc0000035	1000950	1001371	422	13562	46	0.9997050582509954	+	CGGCCUGAAAAAAAA	7847	13335	0	125	64	38	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1080556-1080981	Cluster_6986	Pocillopora_meandrina_HIv1___Sc0000035	1080556	1080981	426	103	30	0.009708737864077669	-	UAAUCGUUGGCUCUUUCUCGAGACGGG	25	0	102	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1143856-1144329	Cluster_6987	Pocillopora_meandrina_HIv1___Sc0000035	1143856	1144329	474	1645	261	1.0	+	AUGAAUGAUGAAUGUGAAU	230	911	599	46	18	35	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1144745-1145576	Cluster_6988	Pocillopora_meandrina_HIv1___Sc0000035	1144745	1145576	832	5023	635	0.9994027473621342	+	GAUUACAAAAUAUACCGGAAGUCUGAUA	876	983	2538	343	326	408	425	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1146812-1147303	Cluster_6989	Pocillopora_meandrina_HIv1___Sc0000035	1146812	1147303	492	744	220	0.9973118279569892	+	UGUGUCUUGGCUUUGAUUGGUGCCGUCA	190	229	363	68	32	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1472155-1473310	Cluster_6990	Pocillopora_meandrina_HIv1___Sc0000035	1472155	1473310	1156	992	457	0.3225806451612903	.	UCUUCUCCAAAGACGUCUGAAUAUUCACUC	49	10	888	10	6	28	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1473587-1474099	Cluster_6991	Pocillopora_meandrina_HIv1___Sc0000035	1473587	1474099	513	727	283	0.0687757909215956	-	UGUGAUCCGUAUAAAGAAUAACUCUUCUGC	41	10	684	6	7	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1474136-1474899	Cluster_6992	Pocillopora_meandrina_HIv1___Sc0000035	1474136	1474899	764	349	186	0.13753581661891118	-	UAGGUAUACCGUGAUUGGAGAAAUGGCGU	18	12	308	2	5	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1475094-1475522	Cluster_6993	Pocillopora_meandrina_HIv1___Sc0000035	1475094	1475522	429	708	227	0.02824858757062147	-	UGUUGAUGUAACCGUGAUCUUUGAAGG	89	3	647	15	3	12	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1581037-1581465	Cluster_6994	Pocillopora_meandrina_HIv1___Sc0000035	1581037	1581465	429	196	60	0.2602040816326531	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	38	1	165	0	1	1	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1582197-1582621	Cluster_6995	Pocillopora_meandrina_HIv1___Sc0000035	1582197	1582621	425	218	109	0.10550458715596331	-	UGAAAGAACUUUCAUGAUGCGUUUUACCU	14	2	200	1	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1582979-1583395	Cluster_6996	Pocillopora_meandrina_HIv1___Sc0000035	1582979	1583395	417	254	169	0.09055118110236221	-	UGUACGAGUCAGACACGUGGAUACUUGC	10	3	236	1	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1583480-1583908	Cluster_6997	Pocillopora_meandrina_HIv1___Sc0000035	1583480	1583908	429	211	125	0.15639810426540285	-	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	20	2	189	4	1	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1989820-1989912	Cluster_6998	Pocillopora_meandrina_HIv1___Sc0000035	1989820	1989912	93	4577	218	1.0	+	UAUUUACAACUCUCAAAACAAC	1696	641	48	391	1975	1485	37	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000035:2054959-2055375	Cluster_6999	Pocillopora_meandrina_HIv1___Sc0000035	2054959	2055375	417	165	3	0.9878787878787879	+	AGUGUGCUCUUAACGGG	163	165	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2146801-2147217	Cluster_7000	Pocillopora_meandrina_HIv1___Sc0000035	2146801	2147217	417	186	3	0.9946236559139785	+	AGUGUGCUCUUAACGGG	184	186	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2501614-2502039	Cluster_7001	Pocillopora_meandrina_HIv1___Sc0000035	2501614	2502039	426	141	50	0.09219858156028368	-	CUUCGUAGAAAUUACCGGACUGUAACAGG	20	47	77	3	11	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2621578-2621996	Cluster_7002	Pocillopora_meandrina_HIv1___Sc0000035	2621578	2621996	419	3398	38	1.0	+	CUUUCCGAGGUCGCA	2620	3398	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2674927-2675334	Cluster_7003	Pocillopora_meandrina_HIv1___Sc0000035	2674927	2675334	408	181	102	0.3812154696132597	.	ACUGGAUACAAAACUGCUCGAUGC	23	2	129	1	2	10	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2675729-2676156	Cluster_7004	Pocillopora_meandrina_HIv1___Sc0000035	2675729	2676156	428	230	98	0.030434782608695653	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	55	1	227	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2743900-2744864	Cluster_7005	Pocillopora_meandrina_HIv1___Sc0000035	2743900	2744864	965	2308	666	0.4003466204506066	.	UGUACCUUUGUCGAUUCUGAUCAUCGCA	128	24	2159	10	26	37	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2746978-2747526	Cluster_7006	Pocillopora_meandrina_HIv1___Sc0000035	2746978	2747526	549	616	179	0.935064935064935	+	UCCUUGUAUACUUUUGGGCCUUUCCAGA	66	8	594	2	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:84755-86650	Cluster_7007	Pocillopora_meandrina_HIv1___Sc0000036	84755	86650	1896	10704	2307	0.9636584454409567	+	CAGGUCUACUGCUUUACUUCUGAGAGUAA	745	154	9943	39	157	167	244	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:86686-89407	Cluster_7008	Pocillopora_meandrina_HIv1___Sc0000036	86686	89407	2722	11489	2903	0.8905910000870397	+	UCUACGUCUUUCGCUUGUUUUUCACUGAGU	256	94	10767	49	73	200	306	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:220603-221016	Cluster_7009	Pocillopora_meandrina_HIv1___Sc0000036	220603	221016	414	80	12	0.0	-	AGGGUGCUGUCGGCU	49	75	3	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:651439-651920	Cluster_7010	Pocillopora_meandrina_HIv1___Sc0000036	651439	651920	482	695	289	0.09496402877697842	-	UAAUCUGAAGGUCGUGAGU	56	485	60	90	21	32	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:714467-714876	Cluster_7011	Pocillopora_meandrina_HIv1___Sc0000036	714467	714876	410	215	139	0.9116279069767442	+	UAAAUGACUCAGUCUACUAAAAUAGAACUA	10	54	119	8	11	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:801362-801777	Cluster_7012	Pocillopora_meandrina_HIv1___Sc0000036	801362	801777	416	1763	11	0.9994327850255247	+	GCGGAUGUGGCGGAA	1402	1762	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1027026-1027429	Cluster_7013	Pocillopora_meandrina_HIv1___Sc0000036	1027026	1027429	404	191	135	0.005235602094240838	-	GACGGGUUUUUAUGACGAACU	12	46	81	30	12	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1124854-1125270	Cluster_7014	Pocillopora_meandrina_HIv1___Sc0000036	1124854	1125270	417	3622	21	0.0	-	GCCGAUGUAGCUCAGUU	1888	3621	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1284759-1285299	Cluster_7015	Pocillopora_meandrina_HIv1___Sc0000036	1284759	1285299	541	1279	469	0.9960906958561376	+	CUGCACACUUUUUAAGACCUGUC	98	342	396	103	193	178	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1286770-1287191	Cluster_7016	Pocillopora_meandrina_HIv1___Sc0000036	1286770	1287191	422	158	81	0.9936708860759493	+	UAGCACGCUGUUUCAACCAUGAAAGAACA	30	28	95	4	7	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1292308-1292851	Cluster_7017	Pocillopora_meandrina_HIv1___Sc0000036	1292308	1292851	544	1858	481	0.9989235737351991	+	GUUUGACGACAAUAGACCUUGGUACACAA	277	311	1120	66	116	129	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1346400-1346823	Cluster_7018	Pocillopora_meandrina_HIv1___Sc0000036	1346400	1346823	424	159	72	1.0	+	AAGGCCAGAAAAUCUGAAGAGACU	18	37	47	11	12	14	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1389111-1389539	Cluster_7019	Pocillopora_meandrina_HIv1___Sc0000036	1389111	1389539	429	469	66	0.0	-	UCUGGAAGCGUUAUCUGCUGGUCUGCC	134	1	444	1	3	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1437981-1438412	Cluster_7020	Pocillopora_meandrina_HIv1___Sc0000036	1437981	1438412	432	782	182	0.0012787723785166241	-	UCUGGAAGCGUUAUCUGCCGGUCUGCCUG	154	69	680	9	7	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1504251-1504679	Cluster_7021	Pocillopora_meandrina_HIv1___Sc0000036	1504251	1504679	429	153	42	0.0	-	UCUGGAAGCAUUAUCUGCCGGUCUGCCUG	44	2	147	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1527809-1528277	Cluster_7022	Pocillopora_meandrina_HIv1___Sc0000036	1527809	1528277	469	1256	312	0.0031847133757961785	-	UGUGACUGAAAAGAUCUUGAAGGAACAUA	159	36	987	17	10	40	166	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1532703-1533139	Cluster_7023	Pocillopora_meandrina_HIv1___Sc0000036	1532703	1533139	437	293	116	0.006825938566552901	-	GCAUUAUCUGCCGGUCUGCCUGUACUUGUC	27	29	243	7	4	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1557087-1557516	Cluster_7024	Pocillopora_meandrina_HIv1___Sc0000036	1557087	1557516	430	327	138	0.0	-	CGUUAUCUGCUGGUCUGCCUGUACUUGUC	78	53	247	8	8	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1572102-1572553	Cluster_7025	Pocillopora_meandrina_HIv1___Sc0000036	1572102	1572553	452	445	81	0.0	-	UCUCGAAGCAUUGUCUGCUGGUCUGCC	62	6	432	1	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1597170-1597606	Cluster_7026	Pocillopora_meandrina_HIv1___Sc0000036	1597170	1597606	437	1256	266	0.0	-	UCUUGAAGCAUUAUCUGCUGGUCUGCCUG	292	252	943	21	11	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1601498-1601928	Cluster_7027	Pocillopora_meandrina_HIv1___Sc0000036	1601498	1601928	431	1060	119	0.9981132075471698	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	633	3	1050	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1615578-1616029	Cluster_7028	Pocillopora_meandrina_HIv1___Sc0000036	1615578	1616029	452	455	85	0.0	-	UCUCGAAGCAUUGUCUGCUGGUCUGCCUG	82	13	437	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1686687-1687189	Cluster_7029	Pocillopora_meandrina_HIv1___Sc0000036	1686687	1687189	503	425	156	0.7411764705882353	.	UCUGGCCACAAAUCGUGCAUUCUUGUUC	68	16	353	6	12	23	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1793180-1793594	Cluster_7030	Pocillopora_meandrina_HIv1___Sc0000036	1793180	1793594	415	131	20	0.12213740458015267	-	CCGUGCUGUAGGCUU	65	129	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2160572-2160987	Cluster_7031	Pocillopora_meandrina_HIv1___Sc0000036	2160572	2160987	416	133	3	0.9774436090225563	+	UGAGGGGGGGUUCUCA	130	131	0	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2254785-2255201	Cluster_7032	Pocillopora_meandrina_HIv1___Sc0000036	2254785	2255201	417	550	15	0.9981818181818182	+	ACGGAGAAUUCUUUU	190	550	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2265598-2266026	Cluster_7033	Pocillopora_meandrina_HIv1___Sc0000036	2265598	2266026	429	143	46	0.9790209790209791	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	22	2	139	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2266561-2267225	Cluster_7034	Pocillopora_meandrina_HIv1___Sc0000036	2266561	2267225	665	977	397	0.7318321392016377	.	UGACUUUCGCUAUCUUCCAACAAUCAGGGA	41	20	852	20	6	21	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2281183-2281602	Cluster_7035	Pocillopora_meandrina_HIv1___Sc0000036	2281183	2281602	420	147	87	0.16326530612244897	-	CGUGUUUACAUGGCCUGAUG	20	73	12	19	35	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2400213-2400686	Cluster_7036	Pocillopora_meandrina_HIv1___Sc0000036	2400213	2400686	474	265455	766	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUCGCC	69829	566	264204	14	39	71	561	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2514437-2514851	Cluster_7037	Pocillopora_meandrina_HIv1___Sc0000036	2514437	2514851	415	170	46	0.011764705882352941	-	GAGUCGGCCGUGGAU	70	142	21	3	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2716860-2717282	Cluster_7038	Pocillopora_meandrina_HIv1___Sc0000036	2716860	2717282	423	163	34	0.9325153374233128	+	UUCGCGUCUGAAGCUGUUAGAGU	82	14	10	4	16	117	2	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2755154-2755583	Cluster_7039	Pocillopora_meandrina_HIv1___Sc0000036	2755154	2755583	430	192	34	1.0	+	UAAGACUGCAAAUGAAAAACGUCAAAUGGC	107	7	183	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2927793-2928327	Cluster_7040	Pocillopora_meandrina_HIv1___Sc0000036	2927793	2928327	535	3340	482	0.9952095808383233	+	AUAAUUAACAGUUGGCAGAUAUUG	602	429	791	75	221	786	1038	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2960173-2960602	Cluster_7041	Pocillopora_meandrina_HIv1___Sc0000036	2960173	2960602	430	265	104	0.9320754716981132	+	UACGUGUAGAAAGCCUUCUCUGACAUC	23	2	249	1	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2960824-2961239	Cluster_7042	Pocillopora_meandrina_HIv1___Sc0000036	2960824	2961239	416	173	89	0.9595375722543352	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	14	0	166	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2961682-2962468	Cluster_7043	Pocillopora_meandrina_HIv1___Sc0000036	2961682	2962468	787	3993	975	0.9328825444527924	+	UAACUUCCCAUUCCUGAACAGAUUCGUG	216	99	3697	30	21	51	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:4441-4869	Cluster_7044	Pocillopora_meandrina_HIv1___Sc0000037	4441	4869	429	383	42	0.013054830287206266	-	UUUUUCCUGUGAACUGAUAUCAACUUAG	226	8	373	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:6786-7213	Cluster_7045	Pocillopora_meandrina_HIv1___Sc0000037	6786	7213	428	164	42	0.8719512195121951	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	58	7	154	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:99318-99732	Cluster_7046	Pocillopora_meandrina_HIv1___Sc0000037	99318	99732	415	80	14	0.95	+	UGUGUGCUCUUAACUA	43	80	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:177212-177641	Cluster_7047	Pocillopora_meandrina_HIv1___Sc0000037	177212	177641	430	267	51	0.0	-	UGUGCUAGUCAAUGGGAACGUAAAUUUGAU	150	8	251	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:373185-373611	Cluster_7048	Pocillopora_meandrina_HIv1___Sc0000037	373185	373611	427	178	36	0.12359550561797752	-	UUGGUGCAUUUCGAUCCUUGCUGUUC	40	0	174	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:374251-374666	Cluster_7049	Pocillopora_meandrina_HIv1___Sc0000037	374251	374666	416	970	16	0.0	-	GAAUCGGCCGUGGCUU	810	970	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:657490-657913	Cluster_7050	Pocillopora_meandrina_HIv1___Sc0000037	657490	657913	424	159	70	0.15723270440251572	-	UGCUUUAACGAACUGAUGUGUUUCUUGA	36	1	153	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:695148-695558	Cluster_7051	Pocillopora_meandrina_HIv1___Sc0000037	695148	695558	411	185	156	0.010810810810810811	-	CUCGAUGGAAAUUCUUAAUGGC	3	49	74	15	20	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:705635-706035	Cluster_7052	Pocillopora_meandrina_HIv1___Sc0000037	705635	706035	401	156	130	0.019230769230769232	-	CUAGUAACUGAUGCUCGACUUCUUUGAAUUU	4	57	71	7	7	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1082538-1083485	Cluster_7053	Pocillopora_meandrina_HIv1___Sc0000037	1082538	1083485	948	2165	724	0.10161662817551963	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	184	25	2015	14	10	25	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1083489-1084357	Cluster_7054	Pocillopora_meandrina_HIv1___Sc0000037	1083489	1084357	869	550	274	0.08	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	41	10	512	3	3	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1084558-1086553	Cluster_7055	Pocillopora_meandrina_HIv1___Sc0000037	1084558	1086553	1996	3413	1152	0.06358042777615001	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	210	31	3155	19	24	61	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1090517-1090944	Cluster_7056	Pocillopora_meandrina_HIv1___Sc0000037	1090517	1090944	428	382	47	1.0	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	198	1	379	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1092825-1093253	Cluster_7057	Pocillopora_meandrina_HIv1___Sc0000037	1092825	1093253	429	130	52	0.9846153846153847	+	AGUUGACAUAUGGACCGGUACAAACAAGGG	27	1	119	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1230353-1231032	Cluster_7058	Pocillopora_meandrina_HIv1___Sc0000037	1230353	1231032	680	650	189	0.9953846153846154	+	UGAGAACUUCUGGUCGUGUUAAACUAAUA	109	7	632	1	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1231089-1231516	Cluster_7059	Pocillopora_meandrina_HIv1___Sc0000037	1231089	1231516	428	242	97	0.9958677685950413	+	UUGGUCUUUAUCUUUUCAGGGUCUGGAA	38	9	229	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1306237-1306655	Cluster_7060	Pocillopora_meandrina_HIv1___Sc0000037	1306237	1306655	419	130	68	0.9384615384615385	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	20	0	126	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1307749-1308153	Cluster_7061	Pocillopora_meandrina_HIv1___Sc0000037	1307749	1308153	405	107	73	0.794392523364486	.	UGUAUUGAUUGAACUUGUCGGUUGACC	9	3	89	2	1	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1309506-1309918	Cluster_7062	Pocillopora_meandrina_HIv1___Sc0000037	1309506	1309918	413	143	72	0.9020979020979021	+	UGCUUGUGACUUAAGUUGUCGUUCUUCU	15	3	130	0	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1368155-1368570	Cluster_7063	Pocillopora_meandrina_HIv1___Sc0000037	1368155	1368570	416	135	10	0.007407407407407408	-	GCCGGGAUAGCUCAGC	97	135	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1803344-1803763	Cluster_7064	Pocillopora_meandrina_HIv1___Sc0000037	1803344	1803763	420	3954	144	0.9979767324228629	+	AUGUCUGUCUGAGUGUCUAC	617	3944	1	8	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1935822-1936248	Cluster_7065	Pocillopora_meandrina_HIv1___Sc0000037	1935822	1936248	427	400	130	0.945	+	UAAGAUUUACACACUGAUCGACCAUGU	142	4	377	0	3	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1936420-1937055	Cluster_7066	Pocillopora_meandrina_HIv1___Sc0000037	1936420	1937055	636	524	239	0.7061068702290076	.	AAGUUUGUGAGCCCUGACAAUCCGGAAGA	31	10	440	2	10	11	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1937379-1938367	Cluster_7067	Pocillopora_meandrina_HIv1___Sc0000037	1937379	1938367	989	3498	616	0.9631217838765008	+	UCGGAUGUACUCUUCUGCCCCAUGUGGAUG	344	33	3318	18	17	42	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1938903-1940794	Cluster_7068	Pocillopora_meandrina_HIv1___Sc0000037	1938903	1940794	1892	2272	930	0.9449823943661971	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	86	35	2129	8	8	32	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1973739-1974153	Cluster_7069	Pocillopora_meandrina_HIv1___Sc0000037	1973739	1974153	415	111	9	0.0	-	UGGGUUCUGUUGGAA	82	111	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2093152-2093575	Cluster_7070	Pocillopora_meandrina_HIv1___Sc0000037	2093152	2093575	424	123	19	0.983739837398374	+	UGACGUUCAAACUUUUCUAGAAGGGAAA	27	28	71	12	4	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2142047-2142474	Cluster_7071	Pocillopora_meandrina_HIv1___Sc0000037	2142047	2142474	428	93	37	0.08602150537634409	-	UAUUUGCACUAUUGUGGAAAAUUCCUGU	16	2	89	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2190695-2191106	Cluster_7072	Pocillopora_meandrina_HIv1___Sc0000037	2190695	2191106	412	84	21	0.9880952380952381	+	AAAAGACAUGAGAGA	20	82	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2252197-2254837	Cluster_7073	Pocillopora_meandrina_HIv1___Sc0000037	2252197	2254837	2641	9578	1975	0.9943620797661307	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1317	58	9322	17	29	39	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2270053-2270481	Cluster_7074	Pocillopora_meandrina_HIv1___Sc0000037	2270053	2270481	429	176	30	1.0	+	UGUAAAUCUUGUCUGGAUCUGGGUCAACA	79	3	171	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2277242-2277671	Cluster_7075	Pocillopora_meandrina_HIv1___Sc0000037	2277242	2277671	430	225	105	0.8666666666666667	+	UCAGUGACUUUUGAGACUAUUGGUAAUAAU	20	2	217	1	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2277916-2278418	Cluster_7076	Pocillopora_meandrina_HIv1___Sc0000037	2277916	2278418	503	391	126	0.9846547314578005	+	UAGUUGACGAAUUUCUGGUGUUAUAAACGG	40	4	380	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2280208-2281532	Cluster_7077	Pocillopora_meandrina_HIv1___Sc0000037	2280208	2281532	1325	2121	612	0.9014615747289014	+	UGUGUGACUAUGAUGAGCUUCAAAGGC	67	24	1938	10	43	44	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2281809-2282636	Cluster_7078	Pocillopora_meandrina_HIv1___Sc0000037	2281809	2282636	828	715	241	0.8391608391608392	+	UGUGUGACUUAAGCUUCUAGCUGCAAACAGC	84	6	660	4	8	4	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2282728-2283298	Cluster_7079	Pocillopora_meandrina_HIv1___Sc0000037	2282728	2283298	571	1198	367	0.8280467445742905	+	UCAAACCUCUCUUGGAUGAAUUUCAUGG	84	15	1096	18	24	13	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2342605-2343031	Cluster_7080	Pocillopora_meandrina_HIv1___Sc0000037	2342605	2343031	427	172	80	0.03488372093023256	-	UGUUUCGCUUAGAAUUGUUGCAGUUGGC	16	7	162	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2417449-2417876	Cluster_7081	Pocillopora_meandrina_HIv1___Sc0000037	2417449	2417876	428	118	32	0.9915254237288136	+	AAUCUAACCAACAGAAAAAUUCUGCAAUCCU	26	7	111	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2424920-2425366	Cluster_7082	Pocillopora_meandrina_HIv1___Sc0000037	2424920	2425366	447	417	175	0.9568345323741008	+	UGCUCAGUAUUGAUGCUGUUGGACGUCG	19	6	395	3	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2425383-2425999	Cluster_7083	Pocillopora_meandrina_HIv1___Sc0000037	2425383	2425999	617	479	196	0.9665970772442589	+	UGAACACGUGGAUGAUGGAACAGUUCAUGG	27	6	457	2	2	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2431072-2431714	Cluster_7084	Pocillopora_meandrina_HIv1___Sc0000037	2431072	2431714	643	556	203	0.9982014388489209	+	UCGGUCUUUAUCUGCACGUAUUCGUAUGUU	55	13	540	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2432048-2432468	Cluster_7085	Pocillopora_meandrina_HIv1___Sc0000037	2432048	2432468	421	413	59	0.9975786924939467	+	AAAGAAGUACAAGUGGUAGAA	103	174	29	208	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2451524-2451938	Cluster_7086	Pocillopora_meandrina_HIv1___Sc0000037	2451524	2451938	415	156	81	1.0	+	UCCGAGGACAGCCUGCA	40	65	84	0	5	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2464093-2464523	Cluster_7087	Pocillopora_meandrina_HIv1___Sc0000037	2464093	2464523	431	182	41	0.989010989010989	+	UAAUGCUGCUGAAUUCUUCCUCCAACAGGA	52	2	180	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2473274-2473815	Cluster_7088	Pocillopora_meandrina_HIv1___Sc0000037	2473274	2473815	542	575	163	0.7965217391304348	.	UGUGAAAGCGGAAUCGUUUUGCUAUGAGC	100	14	539	2	1	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2592424-2592899	Cluster_7089	Pocillopora_meandrina_HIv1___Sc0000037	2592424	2592899	476	3982	291	0.9997488699146158	+	CUGCAGUGAUGAGAACACUUUACCAUAGAUU	1764	450	3372	23	27	41	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2680229-2680657	Cluster_7090	Pocillopora_meandrina_HIv1___Sc0000037	2680229	2680657	429	118	21	0.9915254237288136	+	AACUGAAGAAUCAAUCUCUGAAACCGAUA	65	3	114	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2733621-2734027	Cluster_7091	Pocillopora_meandrina_HIv1___Sc0000037	2733621	2734027	407	83	45	0.37349397590361444	.	UCGUAUUCGUGUGGUAGGCUGUUGUGU	6	8	66	1	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2763358-2763772	Cluster_7092	Pocillopora_meandrina_HIv1___Sc0000037	2763358	2763772	415	137	5	1.0	+	CGGCUUGAAAAAAAA	131	137	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2790804-2791229	Cluster_7093	Pocillopora_meandrina_HIv1___Sc0000037	2790804	2791229	426	156	44	1.0	+	AGUGUGUCGGUUCUGAGCUAGCUUCU	24	3	144	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:60657-61177	Cluster_7094	Pocillopora_meandrina_HIv1___Sc0000038	60657	61177	521	1893	506	0.9968304278922345	+	GUCAGGAUGGCCGAGC	213	1540	166	101	25	31	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:211854-212281	Cluster_7095	Pocillopora_meandrina_HIv1___Sc0000038	211854	212281	428	280	118	0.6821428571428572	.	UAGGGCUAACGAACACUGGUUGGACAGU	48	12	242	9	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:212683-213109	Cluster_7096	Pocillopora_meandrina_HIv1___Sc0000038	212683	213109	427	212	87	0.11320754716981132	-	UAGAAUGAACGGCUUAAACAAACACCUU	17	14	195	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:246164-246579	Cluster_7097	Pocillopora_meandrina_HIv1___Sc0000038	246164	246579	416	193	139	0.9844559585492227	+	AAAGCUAGGACCUGAUGUAAGUCA	6	60	81	13	10	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:287118-287545	Cluster_7098	Pocillopora_meandrina_HIv1___Sc0000038	287118	287545	428	168	49	0.30952380952380953	.	UCCGAGUGCUGCACCUUCUUUCAUGGGAA	48	9	154	3	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:404907-405323	Cluster_7099	Pocillopora_meandrina_HIv1___Sc0000038	404907	405323	417	211	31	0.023696682464454975	-	UGCUCUGAAUGUCAAAG	91	205	2	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:431876-432290	Cluster_7100	Pocillopora_meandrina_HIv1___Sc0000038	431876	432290	415	81	6	1.0	+	UCUGUAUUACAAUGAUC	67	81	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:502976-503393	Cluster_7101	Pocillopora_meandrina_HIv1___Sc0000038	502976	503393	418	210	32	0.9476190476190476	+	CUUUCCGAGGUCGCGUUU	67	202	2	2	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:570317-570732	Cluster_7102	Pocillopora_meandrina_HIv1___Sc0000038	570317	570732	416	104	8	0.019230769230769232	-	ACCGUGGUGGACUGCC	47	104	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:628652-629098	Cluster_7103	Pocillopora_meandrina_HIv1___Sc0000038	628652	629098	447	496	177	0.4959677419354839	.	CGAUAGCACAAAAAAACUCCAGGA	95	36	277	7	12	38	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:629192-629743	Cluster_7104	Pocillopora_meandrina_HIv1___Sc0000038	629192	629743	552	655	228	0.8442748091603054	+	UACAUCCUGUAUAGAAUUCUUUAAUGAC	43	17	581	6	6	16	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:630886-631496	Cluster_7105	Pocillopora_meandrina_HIv1___Sc0000038	630886	631496	611	844	240	0.9123222748815166	+	UGGACCUUCAGAAUUUUCAGCAUUCUUA	180	21	776	8	8	10	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:631535-631961	Cluster_7106	Pocillopora_meandrina_HIv1___Sc0000038	631535	631961	427	422	72	0.9549763033175356	+	UGGGUACAGACGGUAGGUUGAUGAUCU	133	13	401	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:632219-632646	Cluster_7107	Pocillopora_meandrina_HIv1___Sc0000038	632219	632646	428	174	68	0.9137931034482759	+	AAACAACAGAAUGUUCGGACGGCUCGACG	36	6	157	5	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1115161-1115577	Cluster_7108	Pocillopora_meandrina_HIv1___Sc0000038	1115161	1115577	417	352	13	0.002840909090909091	-	GAGAUUGCUGUAGGCUU	183	351	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1216888-1217362	Cluster_7109	Pocillopora_meandrina_HIv1___Sc0000038	1216888	1217362	475	978	159	0.012269938650306749	-	GCCUCUUUAGCUCAGU	341	886	41	29	10	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1251510-1252228	Cluster_7110	Pocillopora_meandrina_HIv1___Sc0000038	1251510	1252228	719	290	137	0.06896551724137931	-	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	38	67	217	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1252309-1253285	Cluster_7111	Pocillopora_meandrina_HIv1___Sc0000038	1252309	1253285	977	1056	392	0.08238636363636363	-	UUUACCUAGAGUCUCUAAUGAUUGAACAUU	94	23	991	2	10	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1257056-1257484	Cluster_7112	Pocillopora_meandrina_HIv1___Sc0000038	1257056	1257484	429	330	132	0.03333333333333333	-	UGCGACACAAAUGGCUCUUGCACAACACA	57	3	320	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1257985-1258448	Cluster_7113	Pocillopora_meandrina_HIv1___Sc0000038	1257985	1258448	464	210	80	0.004761904761904762	-	UACAUGUCUUCACUGUUGAGCUGGGUGA	36	4	201	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1259177-1259624	Cluster_7114	Pocillopora_meandrina_HIv1___Sc0000038	1259177	1259624	448	253	118	0.043478260869565216	-	UGAUGGGCCGUCUGGUACGCAAACGUUC	38	16	220	4	3	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1263837-1264863	Cluster_7115	Pocillopora_meandrina_HIv1___Sc0000038	1263837	1264863	1027	1519	381	0.24423963133640553	.	CUUUCCGAGGACGCGGUC	144	413	1073	3	4	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1269354-1269797	Cluster_7116	Pocillopora_meandrina_HIv1___Sc0000038	1269354	1269797	444	359	161	0.005571030640668524	-	UUGGAGAACGACGCCCGUAGAUGUGGGU	33	5	323	1	0	5	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1270504-1270931	Cluster_7117	Pocillopora_meandrina_HIv1___Sc0000038	1270504	1270931	428	101	28	0.009900990099009901	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	34	0	97	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1271207-1272056	Cluster_7118	Pocillopora_meandrina_HIv1___Sc0000038	1271207	1272056	850	1614	402	0.614002478314746	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	197	17	1548	8	7	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1272757-1273178	Cluster_7119	Pocillopora_meandrina_HIv1___Sc0000038	1272757	1273178	422	227	104	0.7929515418502202	.	UUCCAAUGCAACUGUGGAUCUGCUGAAGC	32	9	166	3	21	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1274815-1275420	Cluster_7120	Pocillopora_meandrina_HIv1___Sc0000038	1274815	1275420	606	385	153	0.005194805194805195	-	UGAAACUCUUACCUCGCUAACGCAUUUGUA	86	3	372	1	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1277615-1278355	Cluster_7121	Pocillopora_meandrina_HIv1___Sc0000038	1277615	1278355	741	612	294	0.0032679738562091504	-	UGUUGUGGCUCAAGAUCUCAAGUGAACAC	29	18	553	5	14	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1278891-1281934	Cluster_7122	Pocillopora_meandrina_HIv1___Sc0000038	1278891	1281934	3044	40022	3536	0.0038478836639848084	-	UGGUUUCAAGACUUCAAGAAAGAUUUCAGG	6813	345	39033	108	136	178	222	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1282338-1285454	Cluster_7123	Pocillopora_meandrina_HIv1___Sc0000038	1282338	1285454	3117	45252	3826	0.0017899761336515514	-	UUUCUACCUUAAACUUCUGACUCUUAUGGU	7345	2149	41939	136	184	435	409	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1285568-1286852	Cluster_7124	Pocillopora_meandrina_HIv1___Sc0000038	1285568	1286852	1285	4715	1254	0.0012725344644750796	-	UGCCAAAAGACUGUUGUGGCUCAAGGUCAC	272	174	4383	28	45	49	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1287164-1289504	Cluster_7125	Pocillopora_meandrina_HIv1___Sc0000038	1287164	1289504	2341	35400	2726	0.00019774011299435027	-	UGUUUACGGGUGAUUGAAUGAGAACUGGU	5391	247	34411	55	39	87	561	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1289842-1292288	Cluster_7126	Pocillopora_meandrina_HIv1___Sc0000038	1289842	1292288	2447	365170	2638	0.00013966097981761919	-	UUCCUGCACGGCUUCAGGCAAUUCUGGC	154209	581	362642	94	172	251	1430	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1296788-1297217	Cluster_7127	Pocillopora_meandrina_HIv1___Sc0000038	1296788	1297217	430	383	147	0.0391644908616188	-	UGACGCUAUCGGUUUUAAGUUUUUGAACA	21	16	353	3	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1353302-1353736	Cluster_7128	Pocillopora_meandrina_HIv1___Sc0000038	1353302	1353736	435	1380	114	0.013768115942028985	-	UCCGCCAUGUGCCUCCA	710	1294	22	36	13	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1355889-1356305	Cluster_7129	Pocillopora_meandrina_HIv1___Sc0000038	1355889	1356305	417	576	39	0.019097222222222224	-	CGGCAUGCAAAAAAA	289	568	8	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1390108-1390737	Cluster_7130	Pocillopora_meandrina_HIv1___Sc0000038	1390108	1390737	630	12712	594	0.9172435494021397	+	UGUGCUGGAAUUAACUGAGUUGGAGGAAC	2250	1231	8172	326	1008	1601	374	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1553779-1554205	Cluster_7131	Pocillopora_meandrina_HIv1___Sc0000038	1553779	1554205	427	176	76	0.2784090909090909	.	UCCUUCGUCUAAUAUCAUGUGUAAAAUGUU	25	11	148	1	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1718392-1718867	Cluster_7132	Pocillopora_meandrina_HIv1___Sc0000038	1718392	1718867	476	667	440	0.9985007496251874	+	AACGGAGAAGACGGAAA	11	256	222	65	47	30	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1719656-1720082	Cluster_7133	Pocillopora_meandrina_HIv1___Sc0000038	1719656	1720082	427	298	240	0.9932885906040269	+	GAAGACAUGACUGAUGA	5	122	107	13	20	21	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1720833-1721299	Cluster_7134	Pocillopora_meandrina_HIv1___Sc0000038	1720833	1721299	467	422	286	1.0	+	GAUGGAUUUGAAGUCUCAGUUUG	9	124	178	38	20	36	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1721510-1721926	Cluster_7135	Pocillopora_meandrina_HIv1___Sc0000038	1721510	1721926	417	224	169	0.9910714285714286	+	GUAACUGAGAUGAAUGGAAGGAUU	6	67	74	22	16	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1722271-1722757	Cluster_7136	Pocillopora_meandrina_HIv1___Sc0000038	1722271	1722757	487	713	374	1.0	+	ACUGCCCAGCGGUUUAUUGUUACA	18	146	333	56	46	62	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1723449-1723852	Cluster_7137	Pocillopora_meandrina_HIv1___Sc0000038	1723449	1723852	404	257	177	0.9571984435797666	+	GCAGACUGCAGGGGCU	7	149	51	14	14	15	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1724166-1724826	Cluster_7138	Pocillopora_meandrina_HIv1___Sc0000038	1724166	1724826	661	695	465	0.9928057553956835	+	UUGUGUCUGUCCCUCAAGGUU	10	206	215	90	62	61	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1849730-1850461	Cluster_7139	Pocillopora_meandrina_HIv1___Sc0000038	1849730	1850461	732	381	163	0.02099737532808399	-	UGAAUGCGUAACAUAACUCCGAUCGAGU	24	6	370	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1851234-1851661	Cluster_7140	Pocillopora_meandrina_HIv1___Sc0000038	1851234	1851661	428	206	110	0.0825242718446602	-	UGAUAGGAGCGACUCUCGAUUUUGA	13	6	192	3	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1851687-1852659	Cluster_7141	Pocillopora_meandrina_HIv1___Sc0000038	1851687	1852659	973	720	356	0.05416666666666667	-	UCGAAUCGUCGGCAGACAACGCAGUGUCGA	43	7	675	11	7	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1913941-1914916	Cluster_7142	Pocillopora_meandrina_HIv1___Sc0000038	1913941	1914916	976	9313	899	0.9347149146354559	+	UGAAUGCUGGUAUCUUGAUAGUAGAAC	2795	136	8147	73	739	134	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2000336-2000758	Cluster_7143	Pocillopora_meandrina_HIv1___Sc0000038	2000336	2000758	423	97	39	0.6288659793814433	.	UUGUACCGGUCCAUAUGUCAACUGUUG	12	1	91	1	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2024640-2025948	Cluster_7144	Pocillopora_meandrina_HIv1___Sc0000038	2024640	2025948	1309	1491	381	0.1267605633802817	-	UAGGAGCUGAAUAACUCAGAAUUGAGC	183	15	1376	1	6	13	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2048099-2048527	Cluster_7145	Pocillopora_meandrina_HIv1___Sc0000038	2048099	2048527	429	106	17	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	74	0	104	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2053370-2053797	Cluster_7146	Pocillopora_meandrina_HIv1___Sc0000038	2053370	2053797	428	325	128	0.3630769230769231	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	62	0	267	2	3	17	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2054249-2054677	Cluster_7147	Pocillopora_meandrina_HIv1___Sc0000038	2054249	2054677	429	151	18	0.019867549668874173	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	67	1	148	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2128900-2129794	Cluster_7148	Pocillopora_meandrina_HIv1___Sc0000038	2128900	2129794	895	477	210	0.37735849056603776	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	47	12	374	7	7	22	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2129978-2130405	Cluster_7149	Pocillopora_meandrina_HIv1___Sc0000038	2129978	2130405	428	128	11	0.015625	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGU	52	0	127	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2153366-2153794	Cluster_7150	Pocillopora_meandrina_HIv1___Sc0000038	2153366	2153794	429	122	27	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	81	0	120	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2158406-2158833	Cluster_7151	Pocillopora_meandrina_HIv1___Sc0000038	2158406	2158833	428	368	142	0.358695652173913	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	65	12	289	4	6	15	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2159286-2159713	Cluster_7152	Pocillopora_meandrina_HIv1___Sc0000038	2159286	2159713	428	141	17	0.02127659574468085	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	60	0	140	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2184108-2184535	Cluster_7153	Pocillopora_meandrina_HIv1___Sc0000038	2184108	2184535	428	226	87	0.9513274336283186	+	UGAUUAAGAACGAUAAACUGGAACGUGU	33	2	220	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2184778-2186379	Cluster_7154	Pocillopora_meandrina_HIv1___Sc0000038	2184778	2186379	1602	2160	743	0.7592592592592593	.	UGGGAAACGGCUGUACUCGUCUAUGACGACC	71	18	1934	6	7	53	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2277716-2278386	Cluster_7155	Pocillopora_meandrina_HIv1___Sc0000038	2277716	2278386	671	1567	581	0.6062539885130823	.	AUUUAUAUCAAGGAAGGCGGUGUU	93	102	1014	24	42	117	268	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2303627-2304055	Cluster_7156	Pocillopora_meandrina_HIv1___Sc0000038	2303627	2304055	429	95	20	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	62	0	94	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2308701-2309325	Cluster_7157	Pocillopora_meandrina_HIv1___Sc0000038	2308701	2309325	625	366	135	0.3825136612021858	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	70	10	282	3	2	16	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2309778-2310205	Cluster_7158	Pocillopora_meandrina_HIv1___Sc0000038	2309778	2310205	428	144	17	0.041666666666666664	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGU	56	1	140	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2329852-2330260	Cluster_7159	Pocillopora_meandrina_HIv1___Sc0000038	2329852	2330260	409	119	73	0.9663865546218487	+	UGAGUAAAGAUUGUUAGAAACUGUUUC	8	3	106	0	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2330327-2332875	Cluster_7160	Pocillopora_meandrina_HIv1___Sc0000038	2330327	2332875	2549	6814	2375	0.8504549457000293	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	153	199	5815	140	87	344	229	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2335417-2337240	Cluster_7161	Pocillopora_meandrina_HIv1___Sc0000038	2335417	2337240	1824	32829	3504	0.927289896128423	+	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2249	459	30590	109	196	487	988	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2344734-2345158	Cluster_7162	Pocillopora_meandrina_HIv1___Sc0000038	2344734	2345158	425	182	98	0.9340659340659341	+	UGACGUCACGAUCUUUGCGCGCUACCAU	15	4	171	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2352207-2352634	Cluster_7163	Pocillopora_meandrina_HIv1___Sc0000038	2352207	2352634	428	126	42	0.8412698412698413	+	ACGACUAUUACGGUCAGCUGAUUACUGGA	26	0	118	0	0	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2549411-2549853	Cluster_7164	Pocillopora_meandrina_HIv1___Sc0000038	2549411	2549853	443	740	90	0.10540540540540541	-	UUUCAAACUAAGGAAGGAGAAAGGGAUA	295	4	626	9	12	7	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2662667-2663081	Cluster_7165	Pocillopora_meandrina_HIv1___Sc0000038	2662667	2663081	415	104	15	0.8653846153846154	+	CGACCGUGGUGGACA	89	94	5	2	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2694494-2695197	Cluster_7166	Pocillopora_meandrina_HIv1___Sc0000038	2694494	2695197	704	297	144	0.9393939393939394	+	UGAUGUGAUUUCCUGUUUGACUUGGUU	28	1	277	5	4	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2696427-2696856	Cluster_7167	Pocillopora_meandrina_HIv1___Sc0000038	2696427	2696856	430	271	145	0.8339483394833949	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	3	242	2	0	3	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:44069-44495	Cluster_7168	Pocillopora_meandrina_HIv1___Sc0000039	44069	44495	427	89	24	0.0	-	GACUGAAGCACGAGCAUCAUUCACUGUGGC	32	8	80	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:58776-59316	Cluster_7169	Pocillopora_meandrina_HIv1___Sc0000039	58776	59316	541	3792	660	0.0	-	CAGUCCAUAUCUAGUACCUAUA	602	482	2129	284	705	66	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:70259-70675	Cluster_7170	Pocillopora_meandrina_HIv1___Sc0000039	70259	70675	417	391	21	0.9974424552429667	+	GAGUGUGCUCUUAACAA	143	390	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:85340-85766	Cluster_7171	Pocillopora_meandrina_HIv1___Sc0000039	85340	85766	427	98	30	1.0	+	GCGACACUUUGAUCCUUGAUGAUCUGG	35	1	95	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:103472-103886	Cluster_7172	Pocillopora_meandrina_HIv1___Sc0000039	103472	103886	415	109	37	0.3577981651376147	.	GAGACUUGAAGCGGA	64	84	18	0	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:324852-325278	Cluster_7173	Pocillopora_meandrina_HIv1___Sc0000039	324852	325278	427	157	48	0.044585987261146494	-	UGGGUACAGACGGUAGGUUGAUGAUCU	26	3	146	2	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:326234-326787	Cluster_7174	Pocillopora_meandrina_HIv1___Sc0000039	326234	326787	554	316	117	0.12658227848101267	-	UGAGAUAGUUCUUCUGAUGUUUAUG	31	14	278	2	5	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:478396-478855	Cluster_7175	Pocillopora_meandrina_HIv1___Sc0000039	478396	478855	460	1293	207	0.22505800464037123	.	UUGUAACAACUUCCACUUGUGUGUCUGUG	204	25	1061	8	10	127	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:478925-479395	Cluster_7176	Pocillopora_meandrina_HIv1___Sc0000039	478925	479395	471	706	161	0.060906515580736544	-	UGAGAUAGUUCUUCUGAUGUUUAUGAUA	114	6	676	3	2	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:557505-557921	Cluster_7177	Pocillopora_meandrina_HIv1___Sc0000039	557505	557921	417	700	15	0.0014285714285714286	-	UGAGACUUGAAGCGGUA	347	699	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:561570-562242	Cluster_7178	Pocillopora_meandrina_HIv1___Sc0000039	561570	562242	673	381	221	0.889763779527559	+	UCUCGAGCGUUUCUAUUGUAGUAAAA	23	6	335	0	9	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:562254-563012	Cluster_7179	Pocillopora_meandrina_HIv1___Sc0000039	562254	563012	759	78219	2586	0.006916478093557831	-	UGAUGAACUAUCUGGUGAAUCUUCUGGU	19400	767	76109	156	270	276	641	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:563045-563756	Cluster_7180	Pocillopora_meandrina_HIv1___Sc0000039	563045	563756	712	7761	767	0.019971653137482285	-	UAAAACGAAGAUUGUCUGCACAAAUUUGC	2019	51	7068	27	103	333	179	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:564553-564984	Cluster_7181	Pocillopora_meandrina_HIv1___Sc0000039	564553	564984	432	481	185	0.9563409563409564	+	UAAUUCCAUCUUGCGCUGAUAGCUCGU	56	5	460	1	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565017-565526	Cluster_7182	Pocillopora_meandrina_HIv1___Sc0000039	565017	565526	510	374	186	0.8903743315508021	+	UGAACUUCUCGGCUCCAAACACUAUGG	37	4	354	2	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565544-565971	Cluster_7183	Pocillopora_meandrina_HIv1___Sc0000039	565544	565971	428	384	185	0.8385416666666666	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	55	3	359	3	3	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565978-567972	Cluster_7184	Pocillopora_meandrina_HIv1___Sc0000039	565978	567972	1995	7695	1818	0.9347628330084471	+	UAAACACACGAUUUCUAGGUAACGAACAG	1009	341	7001	57	45	106	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1069752-1071863	Cluster_7185	Pocillopora_meandrina_HIv1___Sc0000039	1069752	1071863	2112	9618	1648	0.022665834892909128	-	UACGAGCGAUAGAUCUUAAGCAUGUGCUGC	867	40	8756	115	50	80	577	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1079123-1079539	Cluster_7186	Pocillopora_meandrina_HIv1___Sc0000039	1079123	1079539	417	140	75	0.2785714285714286	.	UGACUUGGAUUUGAAUUCU	13	49	67	13	9	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1084366-1084788	Cluster_7187	Pocillopora_meandrina_HIv1___Sc0000039	1084366	1084788	423	154	83	0.5194805194805194	.	UUGGAACGUAUUCAAGAAAGGGC	26	2	87	0	2	44	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1115090-1115499	Cluster_7188	Pocillopora_meandrina_HIv1___Sc0000039	1115090	1115499	410	155	85	0.5548387096774193	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	22	6	132	6	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1115626-1116068	Cluster_7189	Pocillopora_meandrina_HIv1___Sc0000039	1115626	1116068	443	232	107	0.9439655172413793	+	GUGGAGUUAAAAGAAGGGACAACA	19	15	136	12	6	24	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1431207-1431924	Cluster_7190	Pocillopora_meandrina_HIv1___Sc0000039	1431207	1431924	718	3555	411	0.99971870604782	+	UGGCUGUGAUGAACUUAC	293	2583	421	384	95	36	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1462810-1463225	Cluster_7191	Pocillopora_meandrina_HIv1___Sc0000039	1462810	1463225	416	183	12	0.9617486338797814	+	UCCGCUACUUUGACCC	126	177	3	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1582816-1583244	Cluster_7192	Pocillopora_meandrina_HIv1___Sc0000039	1582816	1583244	429	96	7	0.9583333333333334	+	UGGAUUAUCAUUUUUUGUUAGUGUUGGUG	66	0	95	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1662139-1662566	Cluster_7193	Pocillopora_meandrina_HIv1___Sc0000039	1662139	1662566	428	103	43	0.0	-	UGGUGAAGGAACUAAGUUACGCUUGUAGG	22	4	92	2	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1812903-1813329	Cluster_7194	Pocillopora_meandrina_HIv1___Sc0000039	1812903	1813329	427	208	46	0.7307692307692307	.	UGGGUCUACUUCGAAUUCAUCGUUGUU	80	0	198	2	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1906527-1906941	Cluster_7195	Pocillopora_meandrina_HIv1___Sc0000039	1906527	1906941	415	153	10	1.0	+	GACGAAGUGGCCGAG	84	153	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2015662-2016203	Cluster_7196	Pocillopora_meandrina_HIv1___Sc0000039	2015662	2016203	542	709	286	0.0	-	UGACUAACCAGGAGAUGAUAUUU	90	128	329	15	23	156	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2019639-2020189	Cluster_7197	Pocillopora_meandrina_HIv1___Sc0000039	2019639	2020189	551	3845	805	0.0013003901170351106	-	CUUGACUAACCAGGAGAUGACAUUU	539	453	2471	76	263	360	222	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2075617-2076041	Cluster_7198	Pocillopora_meandrina_HIv1___Sc0000039	2075617	2076041	425	289	209	0.9965397923875432	+	AUCUGGAUGAGACGUAUGCGAGUGCUCA	7	103	109	18	24	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2076937-2077481	Cluster_7199	Pocillopora_meandrina_HIv1___Sc0000039	2076937	2077481	545	4348	766	0.999540018399264	+	CCUGGGCUCCUAUGACAUUU	523	1617	1523	186	214	146	662	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2187027-2187479	Cluster_7200	Pocillopora_meandrina_HIv1___Sc0000039	2187027	2187479	453	441	94	0.9931972789115646	+	UCUGUUAAGAAAUACCACAAGGA	117	34	19	14	52	198	124	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2282094-2282550	Cluster_7201	Pocillopora_meandrina_HIv1___Sc0000039	2282094	2282550	457	2654	316	0.008666164280331574	-	UUCGAUCCUAAAUUCUCUUCAUGCUUCUG	411	62	2228	27	40	220	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2285406-2285833	Cluster_7202	Pocillopora_meandrina_HIv1___Sc0000039	2285406	2285833	428	102	41	0.0196078431372549	-	AGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	21	2	96	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2337808-2338236	Cluster_7203	Pocillopora_meandrina_HIv1___Sc0000039	2337808	2338236	429	612	146	0.12091503267973856	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	180	20	468	8	35	73	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2383393-2383821	Cluster_7204	Pocillopora_meandrina_HIv1___Sc0000039	2383393	2383821	429	1573	133	0.02288620470438652	-	UAUGUUUUGAUCGCUUGAGAGUUUUGUGU	596	11	1535	1	10	13	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2398032-2398673	Cluster_7205	Pocillopora_meandrina_HIv1___Sc0000039	2398032	2398673	642	1189	303	0.4575273338940286	.	UAUGUUUUGAUCGCUAGAGAGUUUUGUGU	120	82	965	51	37	17	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2419810-2420247	Cluster_7206	Pocillopora_meandrina_HIv1___Sc0000039	2419810	2420247	438	1829	250	0.008747949699289229	-	UGGUAGUGGUUUUUUGGAUCCUGAUUGGU	194	37	1736	13	11	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2434444-2434872	Cluster_7207	Pocillopora_meandrina_HIv1___Sc0000039	2434444	2434872	429	270	79	0.037037037037037035	-	UUCGAUCCUAAAUUCUCUUCAUGCUUCUG	72	16	203	8	3	30	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2437887-2438315	Cluster_7208	Pocillopora_meandrina_HIv1___Sc0000039	2437887	2438315	429	119	40	0.0	-	AGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	19	2	116	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2460547-2460958	Cluster_7209	Pocillopora_meandrina_HIv1___Sc0000039	2460547	2460958	412	103	63	0.019417475728155338	-	AAAUAGUAGAAUGAAGUCAGAAGCACAGA	9	4	95	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2462946-2463371	Cluster_7210	Pocillopora_meandrina_HIv1___Sc0000039	2462946	2463371	426	158	74	0.3037974683544304	.	GGCAGUGGUUAUUUGGAUCCUGAUUGGUGU	17	19	125	2	1	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2491390-2491817	Cluster_7211	Pocillopora_meandrina_HIv1___Sc0000039	2491390	2491817	428	484	116	0.06818181818181818	-	UUCGAUCCUAAAUUCUCUUCAUG	65	17	210	19	25	162	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2494721-2495151	Cluster_7212	Pocillopora_meandrina_HIv1___Sc0000039	2494721	2495151	431	714	157	0.008403361344537815	-	AGCAGUGGUUUUCUGGAUCCUGAUUGGUG	140	42	650	11	5	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:139375-139790	Cluster_7213	Pocillopora_meandrina_HIv1___Sc0000040	139375	139790	416	104	4	1.0	+	CGUGGAAGGUAGGUCG	88	104	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:152062-152477	Cluster_7214	Pocillopora_meandrina_HIv1___Sc0000040	152062	152477	416	108	30	0.3055555555555556	.	GUGUGUGUCUCUCUGUCA	37	91	4	5	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:241239-241664	Cluster_7215	Pocillopora_meandrina_HIv1___Sc0000040	241239	241664	426	164	72	0.9939024390243902	+	UGAUUGACGUACGGUAUUUGAGACGC	18	3	154	1	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:294499-295072	Cluster_7216	Pocillopora_meandrina_HIv1___Sc0000040	294499	295072	574	3322	239	0.008729680915111379	-	AAGAUGUCGAGCGAUUUCGGAACGGGUU	1109	35	3111	3	4	31	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:302280-302701	Cluster_7217	Pocillopora_meandrina_HIv1___Sc0000040	302280	302701	422	93	25	1.0	+	CUUGAAUCGUUUGGACUGCGCCA	23	8	1	10	30	32	12	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:320126-320705	Cluster_7218	Pocillopora_meandrina_HIv1___Sc0000040	320126	320705	580	1525	289	0.9757377049180328	+	UGAACCGUGCCGAUCUGCUGCCCUUUGAC	278	5	1493	4	2	15	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:321042-321470	Cluster_7219	Pocillopora_meandrina_HIv1___Sc0000040	321042	321470	429	295	61	0.9830508474576272	+	UCCGAUUUAAAAGAUUCUUUGUUUGU	67	2	285	0	2	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:520422-520849	Cluster_7220	Pocillopora_meandrina_HIv1___Sc0000040	520422	520849	428	80	16	0.025	-	GUGUAGAUCAGCCGACUUCAACAUGUUU	57	0	76	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:563526-564122	Cluster_7221	Pocillopora_meandrina_HIv1___Sc0000040	563526	564122	597	5579	480	0.0023301666965405985	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	796	18	5519	2	4	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:732461-732880	Cluster_7222	Pocillopora_meandrina_HIv1___Sc0000040	732461	732880	420	76	20	0.0	-	GACUAACAGAAGGAACUUUUAAACAACGUC	34	5	70	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:786458-786886	Cluster_7223	Pocillopora_meandrina_HIv1___Sc0000040	786458	786886	429	415	110	0.17349397590361446	-	UUGUAUUUGCUGAUCUAUUUGACAUCCUU	110	24	369	3	7	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:909113-909543	Cluster_7224	Pocillopora_meandrina_HIv1___Sc0000040	909113	909543	431	713	109	0.9144460028050491	+	UGCGAUUUCGUUCCUCGUCCUUGAUGAU	118	3	699	0	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:916705-917120	Cluster_7225	Pocillopora_meandrina_HIv1___Sc0000040	916705	917120	416	263	15	0.0038022813688212928	-	GCUGCCGGUCGUUGA	96	263	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:936689-937118	Cluster_7226	Pocillopora_meandrina_HIv1___Sc0000040	936689	937118	430	208	87	0.004807692307692308	-	UCAGUCUCUGCAAUUCUCUGCUUUAGCAGC	22	3	198	0	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:956366-956777	Cluster_7227	Pocillopora_meandrina_HIv1___Sc0000040	956366	956777	412	241	174	0.27385892116182575	.	AGUCCAGCGCUCUGACCACU	8	130	57	27	12	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:957810-958239	Cluster_7228	Pocillopora_meandrina_HIv1___Sc0000040	957810	958239	430	188	79	0.010638297872340425	-	UGCGAACUCGACUGCCGCCACGUGUGUA	23	0	185	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1037092-1037596	Cluster_7229	Pocillopora_meandrina_HIv1___Sc0000040	1037092	1037596	505	658	135	0.028875379939209727	-	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	137	4	637	2	5	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1102507-1102935	Cluster_7230	Pocillopora_meandrina_HIv1___Sc0000040	1102507	1102935	429	242	100	0.012396694214876033	-	UCAGUCUCUGCAAUUCUCUGCUUUAGC	22	3	232	2	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1137367-1138124	Cluster_7231	Pocillopora_meandrina_HIv1___Sc0000040	1137367	1138124	758	270	105	0.8	+	ACAGAGAACAGAAGAGGAUUUAGCAUUU	13	2	217	7	2	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1139158-1139587	Cluster_7232	Pocillopora_meandrina_HIv1___Sc0000040	1139158	1139587	430	292	87	0.8972602739726028	+	AUGGAGAGCAAAAGACUGGACGAUUAGGA	27	4	251	0	4	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1156822-1157770	Cluster_7233	Pocillopora_meandrina_HIv1___Sc0000040	1156822	1157770	949	420	173	0.2571428571428571	.	GUUGACGUGAACGGUGUUAGAUGCCGAGC	32	3	400	2	6	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1158929-1159356	Cluster_7234	Pocillopora_meandrina_HIv1___Sc0000040	1158929	1159356	428	161	49	0.012422360248447204	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	38	1	159	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1159394-1159954	Cluster_7235	Pocillopora_meandrina_HIv1___Sc0000040	1159394	1159954	561	1244	309	0.03456591639871383	-	UAUAUCUUCUUCGGACGCCCACGGCGCG	304	2	1196	1	1	18	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1189844-1190377	Cluster_7236	Pocillopora_meandrina_HIv1___Sc0000040	1189844	1190377	534	520	189	0.6903846153846154	.	GUGUAUACGAUCAGAACGGAAAUGAAUGU	123	8	455	3	10	4	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1191425-1191854	Cluster_7237	Pocillopora_meandrina_HIv1___Sc0000040	1191425	1191854	430	261	87	0.9157088122605364	+	GGAGAGCAAAAGACUGGACGAUUAGGAAA	28	2	222	2	5	8	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1210222-1211396	Cluster_7238	Pocillopora_meandrina_HIv1___Sc0000040	1210222	1211396	1175	888	363	0.9448198198198198	+	UAAGUGCGCUCUCAUGUAGAUAUAUGGG	98	17	817	1	6	20	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1211682-1212113	Cluster_7239	Pocillopora_meandrina_HIv1___Sc0000040	1211682	1212113	432	487	188	0.9425051334702259	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	53	2	467	1	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1212129-1212555	Cluster_7240	Pocillopora_meandrina_HIv1___Sc0000040	1212129	1212555	427	183	98	0.9180327868852459	+	UGAACUUCUCGGCUCCAAACACUAUGG	44	3	169	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1212673-1213100	Cluster_7241	Pocillopora_meandrina_HIv1___Sc0000040	1212673	1213100	428	362	175	0.850828729281768	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	56	6	336	0	3	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1213107-1215104	Cluster_7242	Pocillopora_meandrina_HIv1___Sc0000040	1213107	1215104	1998	3974	1421	0.9026170105686965	+	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	331	39	3734	21	19	51	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1221387-1221814	Cluster_7243	Pocillopora_meandrina_HIv1___Sc0000040	1221387	1221814	428	273	64	0.8717948717948718	+	CAGUUCAGUAUUUUAGGAGUCGAUCCCA	61	5	203	0	5	3	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1222588-1223017	Cluster_7244	Pocillopora_meandrina_HIv1___Sc0000040	1222588	1223017	430	797	95	0.973651191969887	+	UGUGCUCAUACCUUAGCUGUGGCUGAAAUG	201	6	783	3	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1223568-1223997	Cluster_7245	Pocillopora_meandrina_HIv1___Sc0000040	1223568	1223997	430	240	73	0.9416666666666667	+	AUGGAGAGCAAAAGACUGGACGAUUAGGA	27	4	210	0	2	15	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1315909-1316345	Cluster_7246	Pocillopora_meandrina_HIv1___Sc0000040	1315909	1316345	437	250	98	0.044	-	UAGAAAACAUUUUCAGUCUGCAAUUCUCUGC	38	11	225	0	3	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1339765-1341067	Cluster_7247	Pocillopora_meandrina_HIv1___Sc0000040	1339765	1341067	1303	10249	808	0.009854619962923212	-	UGAAGACAAGUGAUUCGCAAUCGAGGGG	863	469	9165	9	25	245	336	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1459450-1460475	Cluster_7248	Pocillopora_meandrina_HIv1___Sc0000040	1459450	1460475	1026	4601	734	0.24233862203868725	.	GUGUGAAACAUGUGGCCUCAGGCAGAAAGU	745	95	3529	20	26	492	439	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1491678-1492232	Cluster_7249	Pocillopora_meandrina_HIv1___Sc0000040	1491678	1492232	555	489	143	0.3333333333333333	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	65	2	454	7	2	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1738924-1739371	Cluster_7250	Pocillopora_meandrina_HIv1___Sc0000040	1738924	1739371	448	3357	61	0.0655347036044087	-	AUACUGAUAAUUGUGGUGACCAGACG	705	6	3164	38	4	30	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1782068-1782470	Cluster_7251	Pocillopora_meandrina_HIv1___Sc0000040	1782068	1782470	403	148	65	0.8918918918918919	+	UGAAGGUAACGUUUCAUCCCGACUGAGA	25	8	132	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1809152-1809566	Cluster_7252	Pocillopora_meandrina_HIv1___Sc0000040	1809152	1809566	415	161	17	0.006211180124223602	-	CUCGGGCUGAGACGU	61	161	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1866697-1867124	Cluster_7253	Pocillopora_meandrina_HIv1___Sc0000040	1866697	1867124	428	149	34	0.9328859060402684	+	UGCGAUUACAGAGGUGCGUUGGAACUCA	91	1	145	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1873852-1874282	Cluster_7254	Pocillopora_meandrina_HIv1___Sc0000040	1873852	1874282	431	233	90	0.927038626609442	+	UUCUGCUAGGUUUGAAGUAGCUUUCUAAAGC	98	4	223	0	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1895511-1896019	Cluster_7255	Pocillopora_meandrina_HIv1___Sc0000040	1895511	1896019	509	219	91	0.0867579908675799	-	UGUACCAUCUGACCUUGCCAAAAUUCGA	18	8	199	4	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1925253-1925669	Cluster_7256	Pocillopora_meandrina_HIv1___Sc0000040	1925253	1925669	417	317	8	0.0	-	UCCGCUACUUUGACCG	157	316	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1928526-1928955	Cluster_7257	Pocillopora_meandrina_HIv1___Sc0000040	1928526	1928955	430	242	53	0.008264462809917356	-	UGAAUGCCGGUAUAGCAAGCUCAGCUCU	45	1	235	4	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1934665-1935065	Cluster_7258	Pocillopora_meandrina_HIv1___Sc0000040	1934665	1935065	401	162	73	0.17901234567901234	-	UACUGAACUUCUUCCAACCAAUGGAGAGA	16	5	147	0	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1966898-1968377	Cluster_7259	Pocillopora_meandrina_HIv1___Sc0000040	1966898	1968377	1480	2941	1037	0.19823189391363483	-	UAGAAGGAUUUGAAAAUGUCAGGCAUGU	175	53	2681	18	17	36	136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1968942-1969362	Cluster_7260	Pocillopora_meandrina_HIv1___Sc0000040	1968942	1969362	421	160	87	0.8375	+	UACUUGACUCUAGGAUACACAAGUUCUGG	22	2	142	2	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1969486-1970721	Cluster_7261	Pocillopora_meandrina_HIv1___Sc0000040	1969486	1970721	1236	3119	1063	0.6755370310997114	.	AGGUGUAGAAUGUAAAAAGCAGCU	169	28	2654	24	21	74	318	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2002375-2002789	Cluster_7262	Pocillopora_meandrina_HIv1___Sc0000040	2002375	2002789	415	131	6	0.007633587786259542	-	CGACCGUGGUGGACG	76	128	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2227580-2228008	Cluster_7263	Pocillopora_meandrina_HIv1___Sc0000040	2227580	2228008	429	485	50	0.9938144329896907	+	UUUUCGAAGAUCUUUCUCUACUGUUGA	177	12	402	17	21	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2234514-2234936	Cluster_7264	Pocillopora_meandrina_HIv1___Sc0000040	2234514	2234936	423	262	99	0.9274809160305344	+	UGAAAGGCUGUGACCGAGGUCA	28	119	8	76	53	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2282624-2283051	Cluster_7265	Pocillopora_meandrina_HIv1___Sc0000040	2282624	2283051	428	252	34	0.9880952380952381	+	UUCUUUACGUGCUCAACUUCUUGAACUU	84	1	237	0	0	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2323975-2324437	Cluster_7266	Pocillopora_meandrina_HIv1___Sc0000040	2323975	2324437	463	845	99	0.9633136094674556	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	549	2	816	12	7	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2425460-2426225	Cluster_7267	Pocillopora_meandrina_HIv1___Sc0000040	2425460	2426225	766	3725	425	0.45503355704697984	.	UUGUCUGUAAACAGUGCAAUACUAGCUUUGC	602	31	3498	16	14	123	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:63964-64380	Cluster_7268	Pocillopora_meandrina_HIv1___Sc0000041	63964	64380	417	102	27	1.0	+	GACGGAUUGAGGAAGCA	65	81	18	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:179301-180091	Cluster_7269	Pocillopora_meandrina_HIv1___Sc0000041	179301	180091	791	534	188	0.05805243445692884	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	64	24	460	1	12	28	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:251235-251699	Cluster_7270	Pocillopora_meandrina_HIv1___Sc0000041	251235	251699	465	1141	108	0.9412795793163892	+	GACGGAUUGAGGAAGCA	697	866	169	12	55	2	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:363575-363990	Cluster_7271	Pocillopora_meandrina_HIv1___Sc0000041	363575	363990	416	84	4	1.0	+	GCCGGUAUAGCUCAGU	76	84	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:396145-396575	Cluster_7272	Pocillopora_meandrina_HIv1___Sc0000041	396145	396575	431	1224	31	0.0016339869281045752	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	548	0	1222	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:433194-433614	Cluster_7273	Pocillopora_meandrina_HIv1___Sc0000041	433194	433614	421	108	44	0.7037037037037037	.	UAUGAUAUCACUGUGGAGCGAGG	24	2	55	2	0	37	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:435916-436330	Cluster_7274	Pocillopora_meandrina_HIv1___Sc0000041	435916	436330	415	109	5	0.0	-	AUGGACUACAAUUUC	104	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:725433-725860	Cluster_7275	Pocillopora_meandrina_HIv1___Sc0000041	725433	725860	428	91	24	0.01098901098901099	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	26	0	88	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1104897-1105322	Cluster_7276	Pocillopora_meandrina_HIv1___Sc0000041	1104897	1105322	426	263	123	0.596958174904943	.	GUUGACGUGAACGGUGUUAGAUGCCGAGC	30	1	227	1	1	5	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1107410-1107837	Cluster_7277	Pocillopora_meandrina_HIv1___Sc0000041	1107410	1107837	428	153	35	0.0	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	50	0	153	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1145307-1145724	Cluster_7278	Pocillopora_meandrina_HIv1___Sc0000041	1145307	1145724	418	142	13	0.9577464788732394	+	AACCUGGUUGAUCCUGCA	96	142	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1287240-1287657	Cluster_7279	Pocillopora_meandrina_HIv1___Sc0000041	1287240	1287657	418	1729	21	0.0	-	GAUGAGGCUCAUAAAA	586	1729	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1434797-1435210	Cluster_7280	Pocillopora_meandrina_HIv1___Sc0000041	1434797	1435210	414	209	167	0.9952153110047847	+	AUCUUGUGCUGCGUCUGC	5	82	62	15	24	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1438370-1439140	Cluster_7281	Pocillopora_meandrina_HIv1___Sc0000041	1438370	1439140	771	6826	1262	0.10313507178435394	-	UGGGUCUUUUUUUUACUUCGGAAGAAUU	739	240	6208	82	66	66	164	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1439161-1442536	Cluster_7282	Pocillopora_meandrina_HIv1___Sc0000041	1439161	1442536	3376	9455	2451	0.14119513484928609	-	AGCAGGAAAAAAAGAUGAUGAACUUGUU	421	301	8394	127	120	206	307	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1507467-1507896	Cluster_7283	Pocillopora_meandrina_HIv1___Sc0000041	1507467	1507896	430	171	29	0.005847953216374269	-	UGUGCAUUGACUGUCAUUUCUAAAUAAACU	79	1	170	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1508695-1509914	Cluster_7284	Pocillopora_meandrina_HIv1___Sc0000041	1508695	1509914	1220	16274	2345	0.04006390561632051	-	UGGAAGAAUGUUACAGUGAACUGGUUGU	1577	122	15623	43	117	174	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1551017-1551434	Cluster_7285	Pocillopora_meandrina_HIv1___Sc0000041	1551017	1551434	418	130	9	0.007692307692307693	-	CUUUGGUGGAGAUGGAUG	64	130	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1579105-1579671	Cluster_7286	Pocillopora_meandrina_HIv1___Sc0000041	1579105	1579671	567	2320	501	0.915948275862069	+	UUAAACCGACUCACAGUCCGAUUCGAAU	287	24	2178	9	20	27	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1775679-1776094	Cluster_7287	Pocillopora_meandrina_HIv1___Sc0000041	1775679	1776094	416	682	10	0.9956011730205279	+	GGUUGGAUCCGGCCCA	657	679	1	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2102529-2103800	Cluster_7288	Pocillopora_meandrina_HIv1___Sc0000041	2102529	2103800	1272	1211	500	0.07927332782824112	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	100	10	1149	7	1	15	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2104670-2105097	Cluster_7289	Pocillopora_meandrina_HIv1___Sc0000041	2104670	2105097	428	135	48	0.0962962962962963	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	63	0	126	1	5	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2105181-2105660	Cluster_7290	Pocillopora_meandrina_HIv1___Sc0000041	2105181	2105660	480	298	120	0.050335570469798654	-	UCCAAUCACACACAGUUCUCCUGCGGC	67	1	291	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2105762-2106388	Cluster_7291	Pocillopora_meandrina_HIv1___Sc0000041	2105762	2106388	627	1648	684	0.16808252427184467	-	UCUUUCUGUUAAACAAUAAUUCCGC	65	25	1472	7	9	50	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2106455-2106994	Cluster_7292	Pocillopora_meandrina_HIv1___Sc0000041	2106455	2106994	540	735	233	0.3238095238095238	.	UAUAUCUCCCAGGGAGUCUCCUCUGUC	63	22	661	1	8	28	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:113049-113801	Cluster_7293	Pocillopora_meandrina_HIv1___Sc0000042	113049	113801	753	920	348	0.0967391304347826	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	95	8	866	4	4	14	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:113895-114320	Cluster_7294	Pocillopora_meandrina_HIv1___Sc0000042	113895	114320	426	213	122	0.018779342723004695	-	UUCAGAUCUUCCCAUGUACAUUCAUCGA	13	2	201	0	4	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:114556-114991	Cluster_7295	Pocillopora_meandrina_HIv1___Sc0000042	114556	114991	436	1313	286	0.05712109672505712	-	UGAUCUGUCGUGACUCUGAAUUAAGUUC	150	32	1222	1	8	25	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:115077-116127	Cluster_7296	Pocillopora_meandrina_HIv1___Sc0000042	115077	116127	1051	2823	742	0.1781792419411973	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	240	27	2444	19	41	66	226	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:116502-117109	Cluster_7297	Pocillopora_meandrina_HIv1___Sc0000042	116502	117109	608	614	285	0.07980456026058631	-	UCUUGACAUGGGAUGUAUUCCUUGAAUA	32	3	570	4	6	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:117156-117571	Cluster_7298	Pocillopora_meandrina_HIv1___Sc0000042	117156	117571	416	195	113	0.07692307692307693	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	27	10	171	1	4	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:231948-232363	Cluster_7299	Pocillopora_meandrina_HIv1___Sc0000042	231948	232363	416	282	9	0.9893617021276596	+	UUCCGAGGUCGCAGUC	258	279	1	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:249250-249840	Cluster_7300	Pocillopora_meandrina_HIv1___Sc0000042	249250	249840	591	1945	374	0.9989717223650385	+	GGAUAGCUGACUUGUGCGAAUAUUA	286	220	1229	52	32	64	348	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:380044-380458	Cluster_7301	Pocillopora_meandrina_HIv1___Sc0000042	380044	380458	415	133	13	0.03759398496240601	-	CGAGACGAGACGAGG	113	131	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:593455-593869	Cluster_7302	Pocillopora_meandrina_HIv1___Sc0000042	593455	593869	415	370	9	0.9972972972972973	+	GCGACUGCUGCCGGC	352	370	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:624742-625606	Cluster_7303	Pocillopora_meandrina_HIv1___Sc0000042	624742	625606	865	1406	379	0.8385490753911806	+	UGAUCUGGAAUUCCGAAUCUGGAAAAUGCA	176	12	1355	7	4	5	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:625815-626879	Cluster_7304	Pocillopora_meandrina_HIv1___Sc0000042	625815	626879	1065	1537	402	0.9277813923227066	+	UGUUAAUGUCUGUACGAGUCUCUCGUC	177	17	1454	2	17	12	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:627094-627505	Cluster_7305	Pocillopora_meandrina_HIv1___Sc0000042	627094	627505	412	239	136	0.8870292887029289	+	UGUGCACCGUUCUAUAACAUCUAGCUCGAU	15	13	204	1	6	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:627868-628442	Cluster_7306	Pocillopora_meandrina_HIv1___Sc0000042	627868	628442	575	840	254	0.8392857142857143	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	111	1	792	4	2	22	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:709172-709586	Cluster_7307	Pocillopora_meandrina_HIv1___Sc0000042	709172	709586	415	79	6	1.0	+	AUGGACUAUGAUUUUU	34	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1021394-1022283	Cluster_7308	Pocillopora_meandrina_HIv1___Sc0000042	1021394	1022283	890	981	249	0.9571865443425076	+	AGGAUCUGCAUCACCUGGAUAAAUUUGC	149	13	880	11	8	29	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1141894-1142308	Cluster_7309	Pocillopora_meandrina_HIv1___Sc0000042	1141894	1142308	415	93	7	0.0	-	CCCUGCCGGAACCACC	36	93	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1270193-1270608	Cluster_7310	Pocillopora_meandrina_HIv1___Sc0000042	1270193	1270608	416	218	126	0.009174311926605505	-	AUCGCUUGUGGUGCCCUCG	11	122	25	21	22	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1278999-1279424	Cluster_7311	Pocillopora_meandrina_HIv1___Sc0000042	1278999	1279424	426	121	27	0.9256198347107438	+	UCGUGAUAUUCUUUAGCCUUCUGAUAUU	49	2	118	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1347342-1347770	Cluster_7312	Pocillopora_meandrina_HIv1___Sc0000042	1347342	1347770	429	133	55	1.0	+	CAAUGUGCGACGGUUUAAACUUACAAGUUA	39	17	105	3	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1524291-1524706	Cluster_7313	Pocillopora_meandrina_HIv1___Sc0000042	1524291	1524706	416	95	13	0.0	-	AACUUUUGACGGUGGAC	55	95	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1622587-1623139	Cluster_7314	Pocillopora_meandrina_HIv1___Sc0000042	1622587	1623139	553	220	62	0.9363636363636364	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	43	2	188	2	6	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1623492-1624091	Cluster_7315	Pocillopora_meandrina_HIv1___Sc0000042	1623492	1624091	600	1459	275	0.8060315284441398	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	485	18	1385	1	3	17	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1719575-1720002	Cluster_7316	Pocillopora_meandrina_HIv1___Sc0000042	1719575	1720002	428	137	31	0.9927007299270073	+	AACUACUGCUCGUACUCUAGAUGACAAUCA	25	2	135	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1728030-1728459	Cluster_7317	Pocillopora_meandrina_HIv1___Sc0000042	1728030	1728459	430	427	111	0.8243559718969555	+	UGCGAUUACAGAGGUGCGUUGGAACUCU	123	34	379	3	4	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1781534-1781951	Cluster_7318	Pocillopora_meandrina_HIv1___Sc0000042	1781534	1781951	418	117	9	0.9572649572649573	+	CUUCCAAGACUCCAGACA	92	117	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1908956-1910728	Cluster_7319	Pocillopora_meandrina_HIv1___Sc0000042	1908956	1910728	1773	9227	2459	0.9245691990896283	+	UGAUAGACUGCACGACGAUUUACGUCA	530	133	8325	63	79	235	392	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1910782-1911458	Cluster_7320	Pocillopora_meandrina_HIv1___Sc0000042	1910782	1911458	677	8097	556	0.9967889341731505	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2133	14	7971	3	44	27	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:45034-45460	Cluster_7321	Pocillopora_meandrina_HIv1___Sc0000043	45034	45460	427	206	113	0.883495145631068	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	18	3	190	2	4	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:118478-119696	Cluster_7322	Pocillopora_meandrina_HIv1___Sc0000043	118478	119696	1219	6141	1316	0.24914509037616023	.	UGAUCAACUGAGAGCAUUAAGUAUAACUGG	457	101	5496	48	55	203	238	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:142705-143357	Cluster_7323	Pocillopora_meandrina_HIv1___Sc0000043	142705	143357	653	1736	522	0.001152073732718894	-	UUGACUGAUGCAGUCUUUAGUAAUCUGAUGG	220	295	1069	93	79	141	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:208491-208980	Cluster_7324	Pocillopora_meandrina_HIv1___Sc0000043	208491	208980	490	1176	235	0.005952380952380952	-	AGUGAAUGAUGAAAUGUGUAUU	139	517	238	136	223	33	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:219904-220394	Cluster_7325	Pocillopora_meandrina_HIv1___Sc0000043	219904	220394	491	692	198	0.001445086705202312	-	AGUGAGUGAUGAAAUGUGU	42	296	211	71	70	17	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:383154-383582	Cluster_7326	Pocillopora_meandrina_HIv1___Sc0000043	383154	383582	429	347	127	0.0	-	GAUCUCUCGUCCUUAUUCUGAUGA	32	14	242	5	16	10	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:439739-440714	Cluster_7327	Pocillopora_meandrina_HIv1___Sc0000043	439739	440714	976	3570	713	0.22745098039215686	.	UGUGAUCGCAUAUAGCUACUUCUGU	399	121	3239	27	33	72	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:555393-555820	Cluster_7328	Pocillopora_meandrina_HIv1___Sc0000043	555393	555820	428	84	17	0.011904761904761904	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	0	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:617190-617606	Cluster_7329	Pocillopora_meandrina_HIv1___Sc0000043	617190	617606	417	50309	53	0.9999403685225308	+	CUUUCCGAGGUCGCA	46522	50309	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:657100-657521	Cluster_7330	Pocillopora_meandrina_HIv1___Sc0000043	657100	657521	422	20661	148	1.0	+	CGUGGUCGAGGUGAG	5740	20661	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:664135-664558	Cluster_7331	Pocillopora_meandrina_HIv1___Sc0000043	664135	664558	424	262	30	0.9809160305343512	+	UGGCCUGAAAAAAAAAAAAAA	37	62	49	42	26	42	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:682728-683211	Cluster_7332	Pocillopora_meandrina_HIv1___Sc0000043	682728	683211	484	279	165	0.0035842293906810036	-	GAAAGGAGAGUGAGAAGCCUGUUA	32	91	92	14	14	24	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:870039-870714	Cluster_7333	Pocillopora_meandrina_HIv1___Sc0000043	870039	870714	676	8087	553	0.003833312724125139	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2135	16	7963	2	49	28	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:870768-871208	Cluster_7334	Pocillopora_meandrina_HIv1___Sc0000043	870768	871208	441	2563	507	0.03238392508778775	-	UAUUGUAUCUGAUGUUUUCAAUGGUGUA	387	27	2423	4	12	38	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:933766-934194	Cluster_7335	Pocillopora_meandrina_HIv1___Sc0000043	933766	934194	429	197	53	0.9390862944162437	+	CUCACUAGCAAUGUAUCAGAUCGUUGACU	53	11	151	5	22	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1057389-1057816	Cluster_7336	Pocillopora_meandrina_HIv1___Sc0000043	1057389	1057816	428	167	75	0.17365269461077845	-	UGUUUGAUCCAAUUCAGGAUACUUUGGCA	20	1	144	2	0	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1058179-1058608	Cluster_7337	Pocillopora_meandrina_HIv1___Sc0000043	1058179	1058608	430	673	178	0.07578008915304606	-	UGAACGAUCUUCUCACCAUCUCUUCUGGAA	146	10	641	3	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1070665-1071201	Cluster_7338	Pocillopora_meandrina_HIv1___Sc0000043	1070665	1071201	537	5515	806	0.00036264732547597464	-	AUCGGUGUUCAAUGAACUGACAGUU	758	739	3435	134	333	329	545	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1099869-1100284	Cluster_7339	Pocillopora_meandrina_HIv1___Sc0000043	1099869	1100284	416	1926	58	0.9963655244029076	+	AGGGUGCUGUCGGCU	924	1915	9	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1193302-1193734	Cluster_7340	Pocillopora_meandrina_HIv1___Sc0000043	1193302	1193734	433	278	177	0.9928057553956835	+	AAGGUGUUCGCUCUUCC	7	162	48	29	17	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1196587-1197090	Cluster_7341	Pocillopora_meandrina_HIv1___Sc0000043	1196587	1197090	504	752	394	1.0	+	UCGAGACAGACACUUUGGCU	25	263	243	53	79	44	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1197261-1197923	Cluster_7342	Pocillopora_meandrina_HIv1___Sc0000043	1197261	1197923	663	602	418	1.0	+	AUGAACUGAAGCCGUUGCUGGAACGACCACU	9	213	231	33	33	38	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1198021-1198576	Cluster_7343	Pocillopora_meandrina_HIv1___Sc0000043	1198021	1198576	556	347	238	1.0	+	GUCUUAGCGAGGACUGCAGCGU	6	157	86	34	31	19	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1198790-1199302	Cluster_7344	Pocillopora_meandrina_HIv1___Sc0000043	1198790	1199302	513	609	342	1.0	+	UGUGAUCUUUUCGGAACCGAGGAACA	28	154	268	26	39	44	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1199683-1200151	Cluster_7345	Pocillopora_meandrina_HIv1___Sc0000043	1199683	1200151	469	436	275	1.0	+	GAGACUGAGGAACAACGUACCCA	11	118	140	47	45	46	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1200358-1200876	Cluster_7346	Pocillopora_meandrina_HIv1___Sc0000043	1200358	1200876	519	1145	357	1.0	+	GUUCAGUCGUUUGGUGGAAACCUUA	234	158	468	73	69	312	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1201225-1201745	Cluster_7347	Pocillopora_meandrina_HIv1___Sc0000043	1201225	1201745	521	556	349	0.9586330935251799	+	GGCAAUGGCUGCUGGAAGCUCU	14	202	177	38	66	25	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1201775-1202262	Cluster_7348	Pocillopora_meandrina_HIv1___Sc0000043	1201775	1202262	488	565	341	0.9964601769911504	+	GUUGUCCAAGCAGACGAGACUCU	12	192	186	35	55	59	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1202373-1202797	Cluster_7349	Pocillopora_meandrina_HIv1___Sc0000043	1202373	1202797	425	294	205	0.9897959183673469	+	CAGCUGUGUAUGCUCUACGAAGA	6	93	130	16	21	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1202918-1203472	Cluster_7350	Pocillopora_meandrina_HIv1___Sc0000043	1202918	1203472	555	763	505	0.9960681520314548	+	AGCGGUGUUCAACUUGGUAGUCA	15	236	270	48	63	73	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1204934-1205448	Cluster_7351	Pocillopora_meandrina_HIv1___Sc0000043	1204934	1205448	515	440	324	0.9863636363636363	+	GACCGAAACGAAGCUUAGACAAGA	6	170	143	31	36	29	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1205695-1206724	Cluster_7352	Pocillopora_meandrina_HIv1___Sc0000043	1205695	1206724	1030	977	649	0.9948822927328557	+	ACUGGAUUAGGUGGCAGAUU	9	419	323	64	60	48	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1207097-1207530	Cluster_7353	Pocillopora_meandrina_HIv1___Sc0000043	1207097	1207530	434	278	187	0.9964028776978417	+	AUCUACAGGAACACAGAGCUGGACGGAUUUG	9	130	101	14	9	13	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1207805-1208251	Cluster_7354	Pocillopora_meandrina_HIv1___Sc0000043	1207805	1208251	447	344	248	0.9941860465116279	+	AACUGGACUCUGAAGGCA	6	123	112	28	32	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1208427-1209619	Cluster_7355	Pocillopora_meandrina_HIv1___Sc0000043	1208427	1209619	1193	1316	911	0.9984802431610942	+	CGCCUCGCGACAGUUGUGUAUAUU	7	456	482	113	95	81	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1210089-1210639	Cluster_7356	Pocillopora_meandrina_HIv1___Sc0000043	1210089	1210639	551	840	473	0.9976190476190476	+	CAUGGCUGAGGAAAGUU	16	330	277	68	48	59	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1210927-1211411	Cluster_7357	Pocillopora_meandrina_HIv1___Sc0000043	1210927	1211411	485	417	255	1.0	+	AAUGAUGUGCUACAAACUUCUGAAAAAGU	23	85	209	24	39	32	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1211639-1212558	Cluster_7358	Pocillopora_meandrina_HIv1___Sc0000043	1211639	1212558	920	909	594	0.9955995599559956	+	AUUUGUGGAGCAGGAAA	24	331	277	90	82	64	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1212786-1213213	Cluster_7359	Pocillopora_meandrina_HIv1___Sc0000043	1212786	1213213	428	386	217	0.9948186528497409	+	UCAAGUAGAGAUCGUGCGUGGAAGCA	15	164	109	48	18	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1213345-1213862	Cluster_7360	Pocillopora_meandrina_HIv1___Sc0000043	1213345	1213862	518	515	348	1.0	+	GGCAUGUGUGGUGACUGUAAUGCAGAACA	10	160	177	41	54	38	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1213866-1214748	Cluster_7361	Pocillopora_meandrina_HIv1___Sc0000043	1213866	1214748	883	1851	991	0.9989195029713668	+	UGCGCUCUUCGUAACUUACAUUUCUGUUCA	56	526	817	92	154	123	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1520956-1521381	Cluster_7362	Pocillopora_meandrina_HIv1___Sc0000043	1520956	1521381	426	162	96	0.1419753086419753	-	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	13	2	141	4	0	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1688244-1689774	Cluster_7363	Pocillopora_meandrina_HIv1___Sc0000043	1688244	1689774	1531	2411	709	0.9742845292409789	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	491	17	2310	10	7	22	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1689996-1690419	Cluster_7364	Pocillopora_meandrina_HIv1___Sc0000043	1689996	1690419	424	241	147	0.941908713692946	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	20	7	215	2	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1691428-1692467	Cluster_7365	Pocillopora_meandrina_HIv1___Sc0000043	1691428	1692467	1040	3383	810	0.9784215193615134	+	UUGGAAUUGGUAGAACUGACUUUACCA	361	39	3263	12	12	27	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1692607-1693599	Cluster_7366	Pocillopora_meandrina_HIv1___Sc0000043	1692607	1693599	993	1105	472	0.9212669683257918	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	92	14	1020	8	7	13	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1693719-1694210	Cluster_7367	Pocillopora_meandrina_HIv1___Sc0000043	1693719	1694210	492	484	283	0.7479338842975206	.	GGAAGAAUUAGAUAAUGAGAAGCU	14	5	409	2	9	12	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1834980-1835405	Cluster_7368	Pocillopora_meandrina_HIv1___Sc0000043	1834980	1835405	426	473	225	0.2854122621564482	.	UAAGAGCGUCUCAUUUUCUCAAUUGCUG	22	18	409	1	5	23	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:124779-125205	Cluster_7369	Pocillopora_meandrina_HIv1___Sc0000044	124779	125205	427	316	85	0.8386075949367089	+	GCGACAACUUUCGGCUACAAAUCGUGC	128	39	244	10	10	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:191263-191677	Cluster_7370	Pocillopora_meandrina_HIv1___Sc0000044	191263	191677	415	157	5	0.9936305732484076	+	CCGCGACUGCUGCCA	153	155	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:364704-365113	Cluster_7371	Pocillopora_meandrina_HIv1___Sc0000044	364704	365113	410	105	59	0.7619047619047619	.	AAAGGAUAGAACUGACCGGUCAGG	16	2	65	5	8	2	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:409810-410234	Cluster_7372	Pocillopora_meandrina_HIv1___Sc0000044	409810	410234	425	39438	176	5.071251077640854e-05	-	UUCCAAAUCUGUGAUGUUAUUGA	32340	164	78	68	1061	36879	1188	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:420597-421918	Cluster_7373	Pocillopora_meandrina_HIv1___Sc0000044	420597	421918	1322	1471	513	0.9225016995241332	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	107	22	1375	4	8	30	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:422138-422793	Cluster_7374	Pocillopora_meandrina_HIv1___Sc0000044	422138	422793	656	634	332	0.5993690851735016	.	AUAAGAGAUAUAAACUUCUGAAAGCCUGUG	22	11	571	0	6	21	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:422940-423589	Cluster_7375	Pocillopora_meandrina_HIv1___Sc0000044	422940	423589	650	586	275	0.8225255972696246	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	94	8	521	10	6	12	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:557949-558378	Cluster_7376	Pocillopora_meandrina_HIv1___Sc0000044	557949	558378	430	112	25	0.9910714285714286	+	UAAGAGCAGAAUCUCAUUGAUCUAUUUUAGA	59	8	97	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:569299-570194	Cluster_7377	Pocillopora_meandrina_HIv1___Sc0000044	569299	570194	896	1266	318	0.3696682464454976	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	216	9	1192	9	4	9	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:587677-588131	Cluster_7378	Pocillopora_meandrina_HIv1___Sc0000044	587677	588131	455	6153	182	0.9998374776531773	+	UUACUCUUGACGCUUAUAUCACU	1712	215	59	249	1715	3462	453	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:883695-884124	Cluster_7379	Pocillopora_meandrina_HIv1___Sc0000044	883695	884124	430	294	61	0.9897959183673469	+	CGAUCCAACAAGAACAGUAUGUGCUGACU	83	3	283	1	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1020356-1020761	Cluster_7380	Pocillopora_meandrina_HIv1___Sc0000044	1020356	1020761	406	263	202	0.0038022813688212928	-	CUAGGCAUUUUUAUUGACUGAAA	5	78	109	18	15	22	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1049958-1050372	Cluster_7381	Pocillopora_meandrina_HIv1___Sc0000044	1049958	1050372	415	1843	10	0.9994574064026045	+	CCUGCUAGAACCUCC	1132	1842	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1087018-1087438	Cluster_7382	Pocillopora_meandrina_HIv1___Sc0000044	1087018	1087438	421	322	34	0.9906832298136646	+	UAAUCUGAAGGUCGUGAGU	70	293	0	29	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1108933-1109347	Cluster_7383	Pocillopora_meandrina_HIv1___Sc0000044	1108933	1109347	415	187	67	0.0106951871657754	-	UAAUCCCAUCGAUUCUGCAGCCGCCAUU	33	3	171	4	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1109943-1110423	Cluster_7384	Pocillopora_meandrina_HIv1___Sc0000044	1109943	1110423	481	10942	526	0.0037470297934564063	-	UAAUCAACUGUGGCUGUGCGAUGUUCUGC	3210	124	10641	20	22	74	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1155525-1155944	Cluster_7385	Pocillopora_meandrina_HIv1___Sc0000044	1155525	1155944	420	1180	34	0.9983050847457627	+	CGGCCUGAAAAAAAAAA	540	1118	14	34	12	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1162769-1163186	Cluster_7386	Pocillopora_meandrina_HIv1___Sc0000044	1162769	1163186	418	339	87	0.011799410029498525	-	GUCAGGAUGGCCGAGU	46	321	4	10	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1192085-1192513	Cluster_7387	Pocillopora_meandrina_HIv1___Sc0000044	1192085	1192513	429	88	23	0.0	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	42	1	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1219156-1219556	Cluster_7388	Pocillopora_meandrina_HIv1___Sc0000044	1219156	1219556	401	81	42	0.0	-	UAUUGAAAAUGAUUUUGGAAUGGAUCCA	11	0	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1474411-1474830	Cluster_7389	Pocillopora_meandrina_HIv1___Sc0000044	1474411	1474830	420	5867	87	0.0018748934719618204	-	AACUUUUGACGGUGG	2610	5864	1	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1500329-1500759	Cluster_7390	Pocillopora_meandrina_HIv1___Sc0000044	1500329	1500759	431	271	72	0.01845018450184502	-	UGUUACGUCGUGGUAGUCUUCCGAUGAGGC	43	5	261	0	4	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1521004-1521419	Cluster_7391	Pocillopora_meandrina_HIv1___Sc0000044	1521004	1521419	416	2250	22	0.0	-	UCUGGAGUCUCGGCA	1085	2249	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1602650-1603065	Cluster_7392	Pocillopora_meandrina_HIv1___Sc0000044	1602650	1603065	416	192	20	0.0	-	CCUUUCCGAGGUCGA	77	187	5	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1605931-1606361	Cluster_7393	Pocillopora_meandrina_HIv1___Sc0000044	1605931	1606361	431	307	147	0.0749185667752443	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	19	3	294	3	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1606382-1606804	Cluster_7394	Pocillopora_meandrina_HIv1___Sc0000044	1606382	1606804	423	236	125	0.18220338983050846	-	UACUGAUAGUGAAACUGCUCCUUGAACC	12	2	226	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1609462-1609889	Cluster_7395	Pocillopora_meandrina_HIv1___Sc0000044	1609462	1609889	428	84	28	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	21	1	82	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1619074-1620250	Cluster_7396	Pocillopora_meandrina_HIv1___Sc0000044	1619074	1620250	1177	1711	671	0.06370543541788427	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	96	30	1575	8	9	34	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1620554-1621144	Cluster_7397	Pocillopora_meandrina_HIv1___Sc0000044	1620554	1621144	591	533	301	0.06941838649155722	-	UGCAAGAAGUACUGGGUUCACUGAGACC	17	7	503	3	1	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1621262-1621662	Cluster_7398	Pocillopora_meandrina_HIv1___Sc0000044	1621262	1621662	401	111	61	0.12612612612612611	-	UGUAAUCAUACGCUUAGCCUCAGUGAACGCU	11	1	97	0	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1621743-1622169	Cluster_7399	Pocillopora_meandrina_HIv1___Sc0000044	1621743	1622169	427	287	129	0.027874564459930314	-	UAGGUAAUGGCACAAACUGAGAGGCGU	28	1	278	1	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1640463-1640962	Cluster_7400	Pocillopora_meandrina_HIv1___Sc0000044	1640463	1640962	500	193	90	0.02072538860103627	-	UGUACGUUGACUCUACUGACUUGAGACCUC	17	2	190	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:182706-183119	Cluster_7401	Pocillopora_meandrina_HIv1___Sc0000045	182706	183119	414	171	73	0.05263157894736842	-	UGAUCUUAGGAACUUUGGGUGACCAUUCA	13	3	157	0	3	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:184675-185342	Cluster_7402	Pocillopora_meandrina_HIv1___Sc0000045	184675	185342	668	634	248	0.09305993690851735	-	UUGGUAUCAUCUCCGAGGCUGUUGUAUC	102	10	586	2	6	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:234132-234611	Cluster_7403	Pocillopora_meandrina_HIv1___Sc0000045	234132	234611	480	2089	222	0.9942556247008137	+	CAACAAAUCAAACUUAGAGGCUCUUCAGC	309	11	2027	10	5	7	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:284932-285360	Cluster_7404	Pocillopora_meandrina_HIv1___Sc0000045	284932	285360	429	7629	129	0.0	-	AUUGCAAGCAAACGGCUAGGAGUCUUCU	3324	13	7549	3	6	5	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:294530-294958	Cluster_7405	Pocillopora_meandrina_HIv1___Sc0000045	294530	294958	429	506	139	0.958498023715415	+	UGUAGAAUCAAUCUGUUACUAAGACACC	109	2	472	11	1	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:295038-295522	Cluster_7406	Pocillopora_meandrina_HIv1___Sc0000045	295038	295522	485	268	159	0.8731343283582089	+	UUGGAUAACAUGUGAUCAUCAAGUGAGU	10	6	231	3	3	2	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:296726-297264	Cluster_7407	Pocillopora_meandrina_HIv1___Sc0000045	296726	297264	539	518	217	0.747104247104247	.	UGUAUUCACUUGGGUUAACUCUUCCACA	96	3	496	3	4	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:351507-351935	Cluster_7408	Pocillopora_meandrina_HIv1___Sc0000045	351507	351935	429	108	32	0.12037037037037036	-	UGUAUCUUCAGAGGAUUUCGGAUCGCUCA	62	3	103	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:631941-632357	Cluster_7409	Pocillopora_meandrina_HIv1___Sc0000045	631941	632357	417	154	13	0.025974025974025976	-	AGAUUUGGGAGUGCUCA	49	151	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:656589-657002	Cluster_7410	Pocillopora_meandrina_HIv1___Sc0000045	656589	657002	414	99	34	0.8686868686868687	+	CUUUCCGAGGUCUCG	20	87	5	0	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:791112-791534	Cluster_7411	Pocillopora_meandrina_HIv1___Sc0000045	791112	791534	423	119	31	0.0	-	UAACAUGAAGAUAUGAAAUUCCUA	42	5	9	1	0	52	52	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:792311-792733	Cluster_7412	Pocillopora_meandrina_HIv1___Sc0000045	792311	792733	423	252	26	0.0	-	UAACAUGAAGACGUUGAAUUUCU	106	39	7	11	59	106	30	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:217937-218345	Cluster_7413	Pocillopora_meandrina_HIv1___Sc0000046	217937	218345	409	155	61	0.6129032258064516	.	CUUUCCGGCUACCGA	47	62	88	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:219132-220447	Cluster_7414	Pocillopora_meandrina_HIv1___Sc0000046	219132	220447	1316	12208	1174	0.994675622542595	+	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUGG	3711	117	11877	61	27	50	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:222590-223018	Cluster_7415	Pocillopora_meandrina_HIv1___Sc0000046	222590	223018	429	244	88	0.9959016393442623	+	UGAACUGUCUGCUGCUGAUGAUGAUGAGC	87	19	211	1	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:223387-223816	Cluster_7416	Pocillopora_meandrina_HIv1___Sc0000046	223387	223816	430	229	107	0.9912663755458515	+	UUGGAUAAUGCUGACAACUUGGGCAAUACC	38	9	210	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:231177-231604	Cluster_7417	Pocillopora_meandrina_HIv1___Sc0000046	231177	231604	428	250	95	0.984	+	UAAGUUCACUGAAAAGGUCUAGACGUUCAAG	28	11	235	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:235153-235718	Cluster_7418	Pocillopora_meandrina_HIv1___Sc0000046	235153	235718	566	589	202	0.9813242784380306	+	UGUAUGCUGUUUGUUGGACGUUGCUGAUA	83	22	530	5	12	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:241311-241886	Cluster_7419	Pocillopora_meandrina_HIv1___Sc0000046	241311	241886	576	333	151	0.996996996996997	+	UGAAGACGGUGAUAAACGAAUUUAUUCUGU	65	18	309	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:242202-242741	Cluster_7420	Pocillopora_meandrina_HIv1___Sc0000046	242202	242741	540	770	260	0.9987012987012988	+	UGAAACUAGCCUCUGGAUGUAAAGGAC	34	12	702	3	22	10	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:244759-245625	Cluster_7421	Pocillopora_meandrina_HIv1___Sc0000046	244759	245625	867	2287	388	0.8867512024486226	+	UCCACAUGGAUUCUUAACCCAGCAAUAGACC	317	60	2131	13	14	25	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:246193-247173	Cluster_7422	Pocillopora_meandrina_HIv1___Sc0000046	246193	247173	981	10017	1316	0.979235299990017	+	UAGGAGCUGAAUAACUCAGAAUUGAGC	1379	72	9574	24	45	95	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:248155-248584	Cluster_7423	Pocillopora_meandrina_HIv1___Sc0000046	248155	248584	430	263	98	1.0	+	UGCCUCAAUUAUUUGUUUCCACUGUUGAUC	107	0	259	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:254125-254646	Cluster_7424	Pocillopora_meandrina_HIv1___Sc0000046	254125	254646	522	3290	325	0.9927051671732523	+	UGCACUCUGCCAAUUUCUCGUUCAAUUCG	1140	44	3140	10	17	49	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:254949-255374	Cluster_7425	Pocillopora_meandrina_HIv1___Sc0000046	254949	255374	426	132	61	1.0	+	UUUUAAAAUAAGACUCUCGGAAAUGCGUU	13	2	127	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:255660-256064	Cluster_7426	Pocillopora_meandrina_HIv1___Sc0000046	255660	256064	405	196	106	0.9948979591836735	+	UACUUCCCACUUUUGGACCAUUAAUGAGA	18	4	182	2	4	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:256240-256670	Cluster_7427	Pocillopora_meandrina_HIv1___Sc0000046	256240	256670	431	393	159	1.0	+	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	44	5	371	6	9	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:257445-257872	Cluster_7428	Pocillopora_meandrina_HIv1___Sc0000046	257445	257872	428	323	118	0.9969040247678018	+	UGGGUGUAGUGCUGAAUACUGCAGCAUU	88	6	311	0	3	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:261258-262127	Cluster_7429	Pocillopora_meandrina_HIv1___Sc0000046	261258	262127	870	6559	671	0.959445037353255	+	UGACCUAAAAUGUAGUGAACAGACUUUU	958	189	5769	50	90	150	311	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:263491-263913	Cluster_7430	Pocillopora_meandrina_HIv1___Sc0000046	263491	263913	423	195	79	0.9948717948717949	+	UAUUGACUUUGGUCCUUGUAUGAGGGAGA	30	2	191	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:265288-265716	Cluster_7431	Pocillopora_meandrina_HIv1___Sc0000046	265288	265716	429	397	128	0.9949622166246851	+	UUCAUUCUCUAAACAUCUUUCUCUGUUU	83	7	387	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:266491-266920	Cluster_7432	Pocillopora_meandrina_HIv1___Sc0000046	266491	266920	430	222	81	0.9864864864864865	+	UGUGUAGAAGUUGUCCACAUAGAGAAGAUG	67	7	213	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:269962-270503	Cluster_7433	Pocillopora_meandrina_HIv1___Sc0000046	269962	270503	542	388	147	0.9948453608247423	+	UGAUGUUGCUGUUCUGGCUUUUCCAAGU	28	9	372	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:277576-278003	Cluster_7434	Pocillopora_meandrina_HIv1___Sc0000046	277576	278003	428	303	125	0.9900990099009901	+	UGGUUAUCUGCAAUUUGUGUCAAAAUAUGU	34	7	290	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:278266-279149	Cluster_7435	Pocillopora_meandrina_HIv1___Sc0000046	278266	279149	884	1016	340	0.9911417322834646	+	UUGGCAUUAAUUUUUGAACGGUUGGAACACC	72	18	964	2	11	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:280871-281697	Cluster_7436	Pocillopora_meandrina_HIv1___Sc0000046	280871	281697	827	411	160	0.8418491484184915	+	UUGGUUGAUUAUUAUAUCUCUAUGGGGC	30	11	357	7	5	13	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:290983-291409	Cluster_7437	Pocillopora_meandrina_HIv1___Sc0000046	290983	291409	427	115	48	0.9826086956521739	+	UCUGCCUCAUUUAAGAACUCUAGCCCAAGG	19	0	111	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:293251-293666	Cluster_7438	Pocillopora_meandrina_HIv1___Sc0000046	293251	293666	416	177	96	0.9943502824858758	+	UCUAACCAUCUGAAUGAGAGCCAUCGCAUC	15	2	171	3	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:307283-309048	Cluster_7439	Pocillopora_meandrina_HIv1___Sc0000046	307283	309048	1766	14527	1581	0.8016107936945	+	UAUAGAUGUAGCUCUUGGUAUGUGCCA	1777	117	12647	61	180	617	905	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:309717-310138	Cluster_7440	Pocillopora_meandrina_HIv1___Sc0000046	309717	310138	422	171	94	0.9298245614035088	+	UGAAAAACUUGUAACUCUUCUCGCCGGC	14	4	156	1	3	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:311089-311636	Cluster_7441	Pocillopora_meandrina_HIv1___Sc0000046	311089	311636	548	1359	260	0.9889624724061811	+	UGUGAAUUUACUGACCAUCUCGACAUUGGUA	171	16	1312	0	10	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:319679-320118	Cluster_7442	Pocillopora_meandrina_HIv1___Sc0000046	319679	320118	440	313	122	0.9456869009584664	+	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	22	2	292	1	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:320338-320755	Cluster_7443	Pocillopora_meandrina_HIv1___Sc0000046	320338	320755	418	184	90	0.9836956521739131	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	28	1	174	3	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:321065-322211	Cluster_7444	Pocillopora_meandrina_HIv1___Sc0000046	321065	322211	1147	4555	1117	0.9534577387486279	+	UUAGUAACUCAGCUCUCAUUGUGCCAUC	199	76	4351	9	17	39	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:330775-331193	Cluster_7445	Pocillopora_meandrina_HIv1___Sc0000046	330775	331193	419	135	49	0.9925925925925926	+	UCUUGUAACCGUGAUAGCUCAGGCUGACU	21	2	133	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:331848-332267	Cluster_7446	Pocillopora_meandrina_HIv1___Sc0000046	331848	332267	420	98	48	0.9897959183673469	+	UUCUGAAGGAGCUUAGAAACCAGACUAAA	7	4	92	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:332705-333133	Cluster_7447	Pocillopora_meandrina_HIv1___Sc0000046	332705	333133	429	335	137	0.9880597014925373	+	UGUGAAAUAGUGUCUGAUACAAGAAGGUC	29	9	300	8	8	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:336248-337540	Cluster_7448	Pocillopora_meandrina_HIv1___Sc0000046	336248	337540	1293	13632	1362	0.9736649061032864	+	UAGAGUGGAUGCAUUCUGAUCUUUACCA	1628	90	13222	30	28	78	184	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:344905-345396	Cluster_7449	Pocillopora_meandrina_HIv1___Sc0000046	344905	345396	492	353	171	0.0708215297450425	-	UAAUUUGCACUCUUCAUAGAUCCCUAAA	20	13	318	2	9	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:345519-345940	Cluster_7450	Pocillopora_meandrina_HIv1___Sc0000046	345519	345940	422	151	88	0.15894039735099338	-	UGAGUGUGAAUUUGUGCCGAGUACCA	16	1	139	0	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:353960-354387	Cluster_7451	Pocillopora_meandrina_HIv1___Sc0000046	353960	354387	428	217	31	1.0	+	UAAAGCUUGGGGUAAUAGAUUUCUGUCU	54	0	216	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:363046-363474	Cluster_7452	Pocillopora_meandrina_HIv1___Sc0000046	363046	363474	429	202	46	0.9158415841584159	+	UGGAAAACCAUCUUGAACCGCUUAAAGCA	72	1	193	0	2	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:402471-402899	Cluster_7453	Pocillopora_meandrina_HIv1___Sc0000046	402471	402899	429	560	78	0.9946428571428572	+	UGCAUACUGUUUGCUCUUGAAUUUCAUCA	269	1	556	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:403060-403650	Cluster_7454	Pocillopora_meandrina_HIv1___Sc0000046	403060	403650	591	287	143	0.8780487804878049	+	UAGGAACGCUUUGAAUUUCUCUGAGACA	15	12	254	1	0	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:404017-405217	Cluster_7455	Pocillopora_meandrina_HIv1___Sc0000046	404017	405217	1201	7539	1045	0.939116593712694	+	UGAAGAACUUGAUCGAUUACAUGUUGAUA	3337	40	7279	18	30	51	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:405422-406024	Cluster_7456	Pocillopora_meandrina_HIv1___Sc0000046	405422	406024	603	446	224	0.8318385650224215	+	UAAGACCGUAUGGACCUGUUUUCUGACUGGC	32	13	398	4	4	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:410127-410555	Cluster_7457	Pocillopora_meandrina_HIv1___Sc0000046	410127	410555	429	140	52	1.0	+	UGAAUUCUUGAAUACUGCUUUGGGUCAGCA	29	0	139	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:411343-411770	Cluster_7458	Pocillopora_meandrina_HIv1___Sc0000046	411343	411770	428	312	66	0.9967948717948718	+	UUAUUUCCAUUUCUGCAUGAGUUUGAGC	198	1	310	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:419043-419455	Cluster_7459	Pocillopora_meandrina_HIv1___Sc0000046	419043	419455	413	117	34	0.9572649572649573	+	UCUGUCUAGUGUUCCACCUUCUGUACAUU	29	29	82	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:426261-426690	Cluster_7460	Pocillopora_meandrina_HIv1___Sc0000046	426261	426690	430	200	73	0.99	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	67	7	177	3	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:439425-439855	Cluster_7461	Pocillopora_meandrina_HIv1___Sc0000046	439425	439855	431	411	81	0.9294403892944039	+	CAACAAUCGUGAAAUUGCUCGUGAAUAUGGC	159	32	372	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:440926-441351	Cluster_7462	Pocillopora_meandrina_HIv1___Sc0000046	440926	441351	426	116	36	0.9827586206896551	+	UGUUACUCUCAGAUCUUGGCAGACGCCU	22	6	109	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:453174-453577	Cluster_7463	Pocillopora_meandrina_HIv1___Sc0000046	453174	453577	404	195	113	0.9794871794871794	+	UGUGACUGAGGCUUGUUUUGAUAACUC	9	12	171	1	0	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:459439-459856	Cluster_7464	Pocillopora_meandrina_HIv1___Sc0000046	459439	459856	418	113	43	0.9823008849557522	+	UUGGCACGUGUCCAUCUUUGAUUUCUGA	19	3	109	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:464183-464610	Cluster_7465	Pocillopora_meandrina_HIv1___Sc0000046	464183	464610	428	196	60	0.2857142857142857	.	UAUCUGAGCAUUUCAUAACAAUGUAACUUC	56	0	182	0	1	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:527203-527729	Cluster_7466	Pocillopora_meandrina_HIv1___Sc0000046	527203	527729	527	1070	121	0.1383177570093458	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	225	6	1056	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:559489-559905	Cluster_7467	Pocillopora_meandrina_HIv1___Sc0000046	559489	559905	417	87	9	0.9885057471264368	+	UUUGACAACUUUUGACA	74	86	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:600960-601376	Cluster_7468	Pocillopora_meandrina_HIv1___Sc0000046	600960	601376	417	133	26	0.9924812030075187	+	GACGACGUCAGAGAGU	37	131	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:657920-658503	Cluster_7469	Pocillopora_meandrina_HIv1___Sc0000046	657920	658503	584	823	265	0.03402187120291616	-	UGACUGACUGUGCUUGUGUACGAUACA	76	8	786	0	4	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:658899-659487	Cluster_7470	Pocillopora_meandrina_HIv1___Sc0000046	658899	659487	589	221	114	0.04072398190045249	-	UGUGUAGAUAUGUCUUUUGGACAGGA	19	5	211	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000049:27861-28457	Cluster_7471	Pocillopora_meandrina_HIv1___Sc0000049	27861	28457	597	5531	526	0.9960224190923883	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	814	18	5454	5	4	15	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000049:29959-30388	Cluster_7472	Pocillopora_meandrina_HIv1___Sc0000049	29959	30388	430	374	59	0.9919786096256684	+	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	169	2	370	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:92873-93301	Cluster_7473	Pocillopora_meandrina_HIv1___Sc0000051	92873	93301	429	104	14	0.9903846153846154	+	UGUUUACGGGUGACUGAAGAAGAACUGGU	74	1	102	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:130033-130458	Cluster_7474	Pocillopora_meandrina_HIv1___Sc0000051	130033	130458	426	139	68	0.7985611510791367	.	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	17	3	136	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:159395-159818	Cluster_7475	Pocillopora_meandrina_HIv1___Sc0000051	159395	159818	424	128	62	0.90625	+	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	14	2	125	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000053:33888-34304	Cluster_7476	Pocillopora_meandrina_HIv1___Sc0000053	33888	34304	417	1096	23	1.0	+	CGGCAUGAAAAAAAA	449	1096	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000054:83625-84040	Cluster_7477	Pocillopora_meandrina_HIv1___Sc0000054	83625	84040	416	77	7	1.0	+	UGAAAAUCUUUGCUCA	71	75	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:3818-4246	Cluster_7478	Pocillopora_meandrina_HIv1___Sc0000055	3818	4246	429	373	41	0.0	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	277	0	367	1	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:22288-22718	Cluster_7479	Pocillopora_meandrina_HIv1___Sc0000055	22288	22718	431	403	120	0.9354838709677419	+	UGACUGUUGACCACCAAGAUUUGGAUC	61	22	323	2	22	18	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:55729-56159	Cluster_7480	Pocillopora_meandrina_HIv1___Sc0000055	55729	56159	431	1908	48	0.9727463312368972	+	UAAAAUCCGAAAAAUUCGAAAUGGAAGGCUG	1460	8	1849	3	1	13	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:111446-111876	Cluster_7481	Pocillopora_meandrina_HIv1___Sc0000055	111446	111876	431	296	126	0.13513513513513514	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	75	11	261	0	3	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000057:62935-63401	Cluster_7482	Pocillopora_meandrina_HIv1___Sc0000057	62935	63401	467	304	123	0.8223684210526315	+	AUAUAUCCUAUACGCAUCUGAUAACAUUUUC	35	26	230	5	16	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:1689-2114	Cluster_7483	Pocillopora_meandrina_HIv1___Sc0000061	1689	2114	426	533	178	0.0	-	CCCCGUGUUGUAGGCUU	51	306	123	12	22	43	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:2315-2731	Cluster_7484	Pocillopora_meandrina_HIv1___Sc0000061	2315	2731	417	242	142	0.9958677685950413	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	19	92	103	7	12	17	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:3907-4329	Cluster_7485	Pocillopora_meandrina_HIv1___Sc0000061	3907	4329	423	182	82	0.0	-	CCCCGUGUUGUAGGCUU	12	92	53	3	7	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:11377-11802	Cluster_7486	Pocillopora_meandrina_HIv1___Sc0000061	11377	11802	426	735	192	0.0013605442176870747	-	CCCCGUGUUGUAGGCUU	67	424	162	26	24	56	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:12009-12418	Cluster_7487	Pocillopora_meandrina_HIv1___Sc0000061	12009	12418	410	208	131	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	67	90	14	13	16	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:13595-14020	Cluster_7488	Pocillopora_meandrina_HIv1___Sc0000061	13595	14020	426	753	186	0.0	-	CCCCGUGUUGUAGGCUU	74	441	168	18	30	53	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:14227-14637	Cluster_7489	Pocillopora_meandrina_HIv1___Sc0000061	14227	14637	411	245	149	0.9959183673469387	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	104	86	16	6	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:15813-16239	Cluster_7490	Pocillopora_meandrina_HIv1___Sc0000061	15813	16239	427	678	177	0.0	-	CCCCGUGUUGUAGGCUU	58	380	167	9	25	61	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:16445-16883	Cluster_7491	Pocillopora_meandrina_HIv1___Sc0000061	16445	16883	439	256	154	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	105	101	12	11	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:18031-18456	Cluster_7492	Pocillopora_meandrina_HIv1___Sc0000061	18031	18456	426	734	181	0.0	-	CCCCGUGUUGUAGGCUU	69	421	153	21	39	49	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:18663-19073	Cluster_7493	Pocillopora_meandrina_HIv1___Sc0000061	18663	19073	411	240	154	0.9958333333333333	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	82	85	9	21	28	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:20249-20674	Cluster_7494	Pocillopora_meandrina_HIv1___Sc0000061	20249	20674	426	671	183	0.0014903129657228018	-	CCCCGUGUUGUAGGCUU	73	392	157	15	19	54	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:20883-21290	Cluster_7495	Pocillopora_meandrina_HIv1___Sc0000061	20883	21290	408	226	150	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	7	72	93	11	21	21	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:22467-22892	Cluster_7496	Pocillopora_meandrina_HIv1___Sc0000061	22467	22892	426	730	192	0.0	-	CCCCGUGUUGUAGGCUU	70	419	180	19	23	54	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:23099-23509	Cluster_7497	Pocillopora_meandrina_HIv1___Sc0000061	23099	23509	411	240	154	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	17	94	92	10	14	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:24685-25110	Cluster_7498	Pocillopora_meandrina_HIv1___Sc0000061	24685	25110	426	771	208	0.0012970168612191958	-	CCCCGUGUUGUAGGCUU	64	458	166	21	36	56	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:25317-25760	Cluster_7499	Pocillopora_meandrina_HIv1___Sc0000061	25317	25760	444	270	168	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	96	110	17	14	21	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:26903-27328	Cluster_7500	Pocillopora_meandrina_HIv1___Sc0000061	26903	27328	426	722	200	0.0	-	CCCCGUGUUGUAGGCUU	71	432	153	14	26	54	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:27535-27977	Cluster_7501	Pocillopora_meandrina_HIv1___Sc0000061	27535	27977	443	287	181	0.9965156794425087	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	108	116	12	21	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:29121-29546	Cluster_7502	Pocillopora_meandrina_HIv1___Sc0000061	29121	29546	426	622	174	0.001607717041800643	-	CCGUGUUGUAGGCUU	51	354	145	12	17	59	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:29746-30195	Cluster_7503	Pocillopora_meandrina_HIv1___Sc0000061	29746	30195	450	281	163	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	20	109	110	16	18	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:31339-31763	Cluster_7504	Pocillopora_meandrina_HIv1___Sc0000061	31339	31763	425	315	127	0.0031746031746031746	-	CCGUGUUGUAGGCUU	22	179	82	7	15	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:31971-32381	Cluster_7505	Pocillopora_meandrina_HIv1___Sc0000061	31971	32381	411	233	149	1.0	+	CACUACCUCCGAGUGCGGCCCACU	9	87	94	11	15	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:39387-39812	Cluster_7506	Pocillopora_meandrina_HIv1___Sc0000061	39387	39812	426	597	179	0.0	-	CCCCGUGUUGUAGGCUU	53	325	156	16	32	46	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:40020-40429	Cluster_7507	Pocillopora_meandrina_HIv1___Sc0000061	40020	40429	410	187	122	0.9893048128342246	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	64	75	4	17	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:41604-42029	Cluster_7508	Pocillopora_meandrina_HIv1___Sc0000061	41604	42029	426	724	196	0.0	-	CCCCGUGUUGUAGGCUU	69	414	165	19	31	58	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:42236-42646	Cluster_7509	Pocillopora_meandrina_HIv1___Sc0000061	42236	42646	411	205	124	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	9	87	73	10	12	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:43822-44247	Cluster_7510	Pocillopora_meandrina_HIv1___Sc0000061	43822	44247	426	503	157	0.0	-	CCCCGUGUUGUAGGCUU	46	285	124	20	14	36	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:44451-44864	Cluster_7511	Pocillopora_meandrina_HIv1___Sc0000061	44451	44864	414	249	154	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	18	91	107	6	17	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:46041-46464	Cluster_7512	Pocillopora_meandrina_HIv1___Sc0000061	46041	46464	424	278	116	0.0035971223021582736	-	CCCCGUGUUGUAGGCUU	25	156	64	6	7	25	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:46673-47083	Cluster_7513	Pocillopora_meandrina_HIv1___Sc0000061	46673	47083	411	200	126	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	65	99	3	11	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:54032-54457	Cluster_7514	Pocillopora_meandrina_HIv1___Sc0000061	54032	54457	426	712	194	0.0	-	CCCCGUGUUGUAGGCUU	74	389	185	18	22	59	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:54664-55074	Cluster_7515	Pocillopora_meandrina_HIv1___Sc0000061	54664	55074	411	230	141	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	71	104	8	11	23	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:56250-56675	Cluster_7516	Pocillopora_meandrina_HIv1___Sc0000061	56250	56675	426	755	191	0.0013245033112582781	-	CCCCGUGUUGUAGGCUU	64	458	165	15	24	51	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:56882-57324	Cluster_7517	Pocillopora_meandrina_HIv1___Sc0000061	56882	57324	443	253	152	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	86	104	18	10	22	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:58468-58893	Cluster_7518	Pocillopora_meandrina_HIv1___Sc0000061	58468	58893	426	717	194	0.001394700139470014	-	CCCCGUGUUGUAGGCUU	71	410	161	26	25	53	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:59100-59540	Cluster_7519	Pocillopora_meandrina_HIv1___Sc0000061	59100	59540	441	235	139	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	74	96	6	21	24	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:60686-61111	Cluster_7520	Pocillopora_meandrina_HIv1___Sc0000061	60686	61111	426	723	191	0.0	-	CCCCGUGUUGUAGGCUU	61	404	170	21	30	63	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:61318-61754	Cluster_7521	Pocillopora_meandrina_HIv1___Sc0000061	61318	61754	437	255	159	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	87	102	15	22	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:62904-63330	Cluster_7522	Pocillopora_meandrina_HIv1___Sc0000061	62904	63330	427	755	203	0.0026490066225165563	-	CCCCGUGUUGUAGGCUU	73	405	201	18	27	60	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:63536-63976	Cluster_7523	Pocillopora_meandrina_HIv1___Sc0000061	63536	63976	441	248	146	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	94	98	15	13	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:65122-65547	Cluster_7524	Pocillopora_meandrina_HIv1___Sc0000061	65122	65547	426	586	187	0.0	-	CCCCGUGUUGUAGGCUU	47	317	148	12	31	39	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:65754-66164	Cluster_7525	Pocillopora_meandrina_HIv1___Sc0000061	65754	66164	411	247	153	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	84	102	12	21	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:67340-67760	Cluster_7526	Pocillopora_meandrina_HIv1___Sc0000061	67340	67760	421	219	98	0.0	-	CCCCGUGUUGUAGGCUU	19	135	55	4	3	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:74804-75217	Cluster_7527	Pocillopora_meandrina_HIv1___Sc0000061	74804	75217	414	91	48	0.0	-	CCCCGUGUUGUAGGCUU	11	64	17	1	2	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000066:51411-51838	Cluster_7528	Pocillopora_meandrina_HIv1___Sc0000066	51411	51838	428	168	56	0.9702380952380952	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	46	0	160	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000067:40407-41365	Cluster_7529	Pocillopora_meandrina_HIv1___Sc0000067	40407	41365	959	1301	205	0.9823212913143735	+	UUGAAACGUGUUGCUGAACGCUUGUUGU	343	9	1254	3	2	24	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000067:64341-64947	Cluster_7530	Pocillopora_meandrina_HIv1___Sc0000067	64341	64947	607	4556	355	0.09877085162423178	-	UCCGGUGUAAAAUAAAACAGAAGCAUU	1436	94	3736	379	42	40	265	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000069:14374-16111	Cluster_7531	Pocillopora_meandrina_HIv1___Sc0000069	14374	16111	1738	2707	1090	0.9604728481714074	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	84	22	2567	8	22	43	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:5099-5514	Cluster_7532	Pocillopora_meandrina_HIv1___Sc0000070	5099	5514	416	147	4	0.9863945578231292	+	CGCGGGAUAGAGCAGU	134	147	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:15938-16353	Cluster_7533	Pocillopora_meandrina_HIv1___Sc0000070	15938	16353	416	149	3	1.0	+	CGCGGGAUAGAGCAGU	137	149	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:26777-27192	Cluster_7534	Pocillopora_meandrina_HIv1___Sc0000070	26777	27192	416	165	3	1.0	+	CGCGGGAUAGAGCAGU	151	165	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:37616-38031	Cluster_7535	Pocillopora_meandrina_HIv1___Sc0000070	37616	38031	416	182	4	1.0	+	CGCGGGAUAGAGCAGU	165	182	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:48455-48870	Cluster_7536	Pocillopora_meandrina_HIv1___Sc0000070	48455	48870	416	146	2	1.0	+	CGCGGGAUAGAGCAGU	132	146	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:8221-8630	Cluster_7537	Pocillopora_meandrina_HIv1___Sc0000077	8221	8630	410	75	7	0.84	+	UAAGCUUUCGUCCAUGUUAUCACUU	40	1	73	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:28307-29021	Cluster_7538	Pocillopora_meandrina_HIv1___Sc0000077	28307	29021	715	359	189	0.09749303621169916	-	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	25	3	322	4	7	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:30591-31003	Cluster_7539	Pocillopora_meandrina_HIv1___Sc0000077	30591	31003	413	147	72	0.0	-	UGCAUUCUCAAGUCGUGCUCUGUAACGG	34	1	143	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:31166-31695	Cluster_7540	Pocillopora_meandrina_HIv1___Sc0000077	31166	31695	530	524	208	0.011450381679389313	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	35	2	512	2	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:31816-32245	Cluster_7541	Pocillopora_meandrina_HIv1___Sc0000077	31816	32245	430	559	122	0.012522361359570662	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	127	3	547	2	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:613-1028	Cluster_7542	Pocillopora_meandrina_HIv1___Sc0000080	613	1028	416	177	104	0.01694915254237288	-	UCGUCUUGUUUCUGUUCUGACCCGAACA	11	2	173	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:14588-15009	Cluster_7543	Pocillopora_meandrina_HIv1___Sc0000080	14588	15009	422	127	37	0.015748031496062992	-	UCAAAACCUUGUUGGCUGUAUUCUCUCAUC	53	0	122	0	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:19971-20587	Cluster_7544	Pocillopora_meandrina_HIv1___xfSc0000000	19971	20587	617	332	112	0.9186746987951807	+	UGUACUCUUUCUAUUUUCCUUCGUUCCUGGG	51	8	316	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:261113-261577	Cluster_7545	Pocillopora_meandrina_HIv1___xfSc0000000	261113	261577	465	206	84	0.9951456310679612	+	GACGGACUGAGGAAGCA	31	76	92	5	7	13	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:369300-369822	Cluster_7546	Pocillopora_meandrina_HIv1___xfSc0000000	369300	369822	523	1864	172	0.9946351931330472	+	UGUGUGUUUGGCUGGAGCAUCUGCGGCUA	214	25	1794	18	11	6	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:375425-375956	Cluster_7547	Pocillopora_meandrina_HIv1___xfSc0000000	375425	375956	532	756	172	0.0701058201058201	-	UUUGAUAUAAAGGUUGUGGAAAAACAGU	78	35	673	5	3	21	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:528923-529339	Cluster_7548	Pocillopora_meandrina_HIv1___xfSc0000000	528923	529339	417	138	45	0.9927536231884058	+	GACGGACUGAGGAAGCA	51	107	13	0	8	6	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:587017-587438	Cluster_7549	Pocillopora_meandrina_HIv1___xfSc0000000	587017	587438	422	127	71	0.905511811023622	+	UCUCUCUGUUUUGGUCUCGCCAUGGAAC	14	0	122	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:588528-588954	Cluster_7550	Pocillopora_meandrina_HIv1___xfSc0000000	588528	588954	427	159	102	0.9056603773584906	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	14	4	143	2	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:598004-598432	Cluster_7551	Pocillopora_meandrina_HIv1___xfSc0000000	598004	598432	429	169	34	0.011834319526627219	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	71	0	156	0	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:651583-652001	Cluster_7552	Pocillopora_meandrina_HIv1___xfSc0000000	651583	652001	419	125	9	0.032	-	UUAUGUUUUGGCUUGUUUU	107	124	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:659750-660262	Cluster_7553	Pocillopora_meandrina_HIv1___xfSc0000000	659750	660262	513	379	124	0.920844327176781	+	UAAGAUUCCAAGAUAUUUAAAACAAGUAAC	32	4	345	0	4	3	23	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:695933-696404	Cluster_7554	Pocillopora_meandrina_HIv1___xfSc0000000	695933	696404	472	394	169	0.9035532994923858	+	UCUGUACUAGAGCAAGAACAAGGUUUU	26	4	346	3	3	2	36	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:696415-696842	Cluster_7555	Pocillopora_meandrina_HIv1___xfSc0000000	696415	696842	428	214	103	0.9112149532710281	+	UGUUCUUGUAGUCUUUUAACAGCUUGUU	21	0	206	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:814458-815107	Cluster_7556	Pocillopora_meandrina_HIv1___xfSc0000000	814458	815107	650	569	288	0.22495606326889278	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	82	3	503	4	4	16	39	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:815254-815909	Cluster_7557	Pocillopora_meandrina_HIv1___xfSc0000000	815254	815909	656	652	316	0.40644171779141103	.	UGUGACUGCUUGCAAUAAUAUUAUACA	20	2	580	2	6	17	45	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:816129-816786	Cluster_7558	Pocillopora_meandrina_HIv1___xfSc0000000	816129	816786	658	1129	328	0.08237378210806023	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	115	7	1068	5	5	26	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:817024-817450	Cluster_7559	Pocillopora_meandrina_HIv1___xfSc0000000	817024	817450	427	233	139	0.15879828326180256	-	UGAGUCGAGGUUAUUCACAAUACGAGC	33	12	198	1	2	8	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:874344-874760	Cluster_7560	Pocillopora_meandrina_HIv1___xfSc0000000	874344	874760	417	107	47	0.9813084112149533	+	GACGGACUGAGGAAGCA	23	54	15	13	12	7	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1150152-1150567	Cluster_7561	Pocillopora_meandrina_HIv1___xfSc0000000	1150152	1150567	416	204	11	0.004901960784313725	-	GCGGGUAUAGCUCAGU	138	204	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1384891-1385321	Cluster_7562	Pocillopora_meandrina_HIv1___xfSc0000000	1384891	1385321	431	323	89	0.09907120743034056	-	UUAAACCGACUCACAGUCCGAUUCGAAU	98	3	305	2	0	7	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1437925-1438366	Cluster_7563	Pocillopora_meandrina_HIv1___xfSc0000000	1437925	1438366	442	394	215	0.8477157360406091	+	UACUCUUUCGAGUUUCGUGUUACUGUUGGG	21	11	355	1	7	9	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1596809-1597230	Cluster_7564	Pocillopora_meandrina_HIv1___xfSc0000000	1596809	1597230	422	94	22	0.7978723404255319	.	CUUCAUUCUGAUCUAUUGUUACAGUUACAAC	27	0	90	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:43913-44382	Cluster_7565	Pocillopora_meandrina_HIv1___xfSc0000001	43913	44382	470	5231	328	0.1391703307207035	-	UGAUCUGCGCAUAGGAAUUGCCCUGGAC	1955	18	4945	7	26	68	167	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:44951-45375	Cluster_7566	Pocillopora_meandrina_HIv1___xfSc0000001	44951	45375	425	218	61	0.8211009174311926	+	AUGUAGAGUGUCUUUAAGGUCAAUA	37	5	171	0	1	15	26	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:45557-45985	Cluster_7567	Pocillopora_meandrina_HIv1___xfSc0000001	45557	45985	429	155	31	0.9032258064516129	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	40	0	153	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:316338-317779	Cluster_7568	Pocillopora_meandrina_HIv1___xfSc0000001	316338	317779	1442	8024	1271	0.8980558325024925	+	UGCGCAAUCGUGAUCAAAAAUAUCCUCAGA	726	38	7691	33	33	99	130	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:356794-357210	Cluster_7569	Pocillopora_meandrina_HIv1___xfSc0000001	356794	357210	417	579	10	1.0	+	UUUUAUACUCACAUCCU	291	579	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:422317-423401	Cluster_7570	Pocillopora_meandrina_HIv1___xfSc0000001	422317	423401	1085	649	190	0.7057010785824345	.	AUUGUUUGGAUGUGUCUGCAAAUGCAGUGC	44	56	516	4	3	24	46	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:433286-433793	Cluster_7571	Pocillopora_meandrina_HIv1___xfSc0000001	433286	433793	508	2435	302	0.946611909650924	+	UGUUUCACACUUUACUACAUUCCCUGGU	639	44	2273	6	5	28	79	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:441381-441785	Cluster_7572	Pocillopora_meandrina_HIv1___xfSc0000001	441381	441785	405	103	50	0.05825242718446602	-	UACUCUCCUCUUGAGCUGCUCGGAUAUCAGC	31	2	93	1	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:487276-487691	Cluster_7573	Pocillopora_meandrina_HIv1___xfSc0000001	487276	487691	416	119	6	0.9915966386554622	+	CCGGACCUCAGAUCCG	81	119	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:614071-614499	Cluster_7574	Pocillopora_meandrina_HIv1___xfSc0000001	614071	614499	429	91	30	0.978021978021978	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	30	0	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:655377-655787	Cluster_7575	Pocillopora_meandrina_HIv1___xfSc0000001	655377	655787	411	148	63	0.39864864864864863	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	19	2	135	1	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1021545-1021972	Cluster_7576	Pocillopora_meandrina_HIv1___xfSc0000001	1021545	1021972	428	91	34	0.967032967032967	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	27	0	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1062411-1062820	Cluster_7577	Pocillopora_meandrina_HIv1___xfSc0000001	1062411	1062820	410	129	61	0.5038759689922481	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	14	7	115	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1106692-1108687	Cluster_7578	Pocillopora_meandrina_HIv1___xfSc0000001	1106692	1108687	1996	7742	1572	0.9691294239214673	+	UACUCUUCUGUGCUGUAUUCCAUUUGC	1005	37	7463	16	31	81	114	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1108888-1109756	Cluster_7579	Pocillopora_meandrina_HIv1___xfSc0000001	1108888	1109756	869	654	319	0.9204892966360856	+	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	25	12	614	1	2	12	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1109760-1110707	Cluster_7580	Pocillopora_meandrina_HIv1___xfSc0000001	1109760	1110707	948	2252	710	0.9076376554174067	+	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	199	16	2113	9	18	25	71	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:168712-169762	Cluster_7581	Pocillopora_meandrina_HIv1___xfSc0000002	168712	169762	1051	2667	534	0.9673790776152981	+	UGAUGUAACCGUGAUCUUUGAAGGCCCGA	397	7	2593	6	4	20	37	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:170249-170886	Cluster_7582	Pocillopora_meandrina_HIv1___xfSc0000002	170249	170886	638	725	230	0.9489655172413793	+	UGUGUCAGAACCCGGCUUGCAUAAGUGA	119	10	682	4	3	20	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:170921-171342	Cluster_7583	Pocillopora_meandrina_HIv1___xfSc0000002	170921	171342	422	231	144	0.658008658008658	.	UAGACGAAGAAUCCAGUAAACUAACUGUGUU	17	2	201	4	4	5	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:171482-173003	Cluster_7584	Pocillopora_meandrina_HIv1___xfSc0000002	171482	173003	1522	4290	1161	0.8284382284382285	+	UGAAGACUCGAAUACA	222	703	3314	59	20	38	156	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:178161-178586	Cluster_7585	Pocillopora_meandrina_HIv1___xfSc0000002	178161	178586	426	133	63	0.12030075187969924	-	UUAUAAGGAUCUCAAGGCGAAAAAAGGG	42	13	114	2	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:303947-304378	Cluster_7586	Pocillopora_meandrina_HIv1___xfSc0000002	303947	304378	432	329	117	0.0	-	UUCUGUAGCAGCCGAUGUCCUGGGAGAUG	24	4	291	7	6	2	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:344012-344439	Cluster_7587	Pocillopora_meandrina_HIv1___xfSc0000002	344012	344439	428	198	95	0.8535353535353535	+	UAUGACGUCUUCAAUUUACUUUAUUUGA	30	20	154	6	4	11	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:344476-344901	Cluster_7588	Pocillopora_meandrina_HIv1___xfSc0000002	344476	344901	426	98	31	0.9489795918367347	+	UUGGAACGUGUUGCUGAACGCUUGCU	26	5	88	0	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:446680-447730	Cluster_7589	Pocillopora_meandrina_HIv1___xfSc0000002	446680	447730	1051	768	351	0.7838541666666666	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	30	8	721	7	2	13	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:447990-448420	Cluster_7590	Pocillopora_meandrina_HIv1___xfSc0000002	447990	448420	431	655	220	0.9221374045801527	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	90	1	571	2	6	11	64	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:480374-480796	Cluster_7591	Pocillopora_meandrina_HIv1___xfSc0000002	480374	480796	423	277	130	0.0	-	UGCGUUCUGUCGGUGAUGUGAUUUUACCAC	50	4	267	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:481067-481485	Cluster_7592	Pocillopora_meandrina_HIv1___xfSc0000002	481067	481485	419	101	40	0.0	-	AGGACUACCAACAUCUUCUUUUCCCGGU	32	0	99	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:482097-482525	Cluster_7593	Pocillopora_meandrina_HIv1___xfSc0000002	482097	482525	429	255	133	0.00392156862745098	-	UCGGUCUGGUCGCUCUGGAUGAUGACGC	17	2	240	2	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:482702-483129	Cluster_7594	Pocillopora_meandrina_HIv1___xfSc0000002	482702	483129	428	317	78	0.0	-	UGGAUUGUCUUCAGUUGGGACGUGAUGC	155	0	312	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:483514-483942	Cluster_7595	Pocillopora_meandrina_HIv1___xfSc0000002	483514	483942	429	5039	279	0.0	-	UCUGGUCAGGCUGCAAGCAUACAACACC	3144	19	4989	4	16	4	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:497091-497512	Cluster_7596	Pocillopora_meandrina_HIv1___xfSc0000002	497091	497512	422	130	74	0.9538461538461539	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	13	0	124	0	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:498601-499027	Cluster_7597	Pocillopora_meandrina_HIv1___xfSc0000002	498601	499027	427	141	74	0.8439716312056738	+	UGUAUUGAUUGAACUUGUCGGUUGACC	20	1	128	0	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:500363-500772	Cluster_7598	Pocillopora_meandrina_HIv1___xfSc0000002	500363	500772	410	141	80	0.8652482269503546	+	UGCUUGUGACUUAAGUUGUCGUUCUUCU	14	0	130	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:572733-573153	Cluster_7599	Pocillopora_meandrina_HIv1___xfSc0000002	572733	573153	421	939	29	1.0	+	GACUUGAAGCGGUUGGU	558	939	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:573627-574118	Cluster_7600	Pocillopora_meandrina_HIv1___xfSc0000002	573627	574118	492	564	127	0.010638297872340425	-	UGUUUAUUGUGCGAACUCGACUGCCGCCAC	59	5	555	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:575312-575715	Cluster_7601	Pocillopora_meandrina_HIv1___xfSc0000002	575312	575715	404	155	93	0.14193548387096774	-	UAAAUCUCUCGGGUCAAUACAGAUGCGUA	14	2	146	2	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:576204-576628	Cluster_7602	Pocillopora_meandrina_HIv1___xfSc0000002	576204	576628	425	135	74	0.1111111111111111	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	12	1	124	3	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:577720-578141	Cluster_7603	Pocillopora_meandrina_HIv1___xfSc0000002	577720	578141	422	144	80	0.04861111111111111	-	UUCUCUCUGUUUUGGUCUCGCCAUGGAAC	18	1	132	0	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:652776-653204	Cluster_7604	Pocillopora_meandrina_HIv1___xfSc0000002	652776	653204	429	375	53	0.005333333333333333	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	266	1	372	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:116595-117023	Cluster_7605	Pocillopora_meandrina_HIv1___xfSc0000003	116595	117023	429	92	31	0.9565217391304348	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	35	0	92	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:232473-232900	Cluster_7606	Pocillopora_meandrina_HIv1___xfSc0000003	232473	232900	428	405	121	1.0	+	UGGAUUGUCUUCAGUUGGGACGUGAUGC	160	3	394	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:233077-233723	Cluster_7607	Pocillopora_meandrina_HIv1___xfSc0000003	233077	233723	647	325	172	1.0	+	UCGGUCUGGUCGCUCUGGAUGAUGACGC	25	2	320	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:234001-234669	Cluster_7608	Pocillopora_meandrina_HIv1___xfSc0000003	234001	234669	669	664	311	0.9984939759036144	+	UAAGACUACGUGAAUUGGAAUUUGAGGU	31	5	634	5	1	6	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:234871-235369	Cluster_7609	Pocillopora_meandrina_HIv1___xfSc0000003	234871	235369	499	719	257	0.9972183588317107	+	UGCGUGUCCUUUUCUGCUGAGUUUGGAA	84	8	689	7	5	5	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:379804-380218	Cluster_7610	Pocillopora_meandrina_HIv1___xfSc0000003	379804	380218	415	75	11	0.0	-	UAGGGAACGUGAGCC	54	74	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:8030-8744	Cluster_7611	Pocillopora_meandrina_HIv1___xfSc0000004	8030	8744	715	364	189	0.07417582417582418	-	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	29	4	335	6	1	4	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:10889-11418	Cluster_7612	Pocillopora_meandrina_HIv1___xfSc0000004	10889	11418	530	546	220	0.007326007326007326	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	32	5	532	2	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:11539-11968	Cluster_7613	Pocillopora_meandrina_HIv1___xfSc0000004	11539	11968	430	597	124	0.018425460636515914	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	127	2	586	4	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:42435-42862	Cluster_7614	Pocillopora_meandrina_HIv1___xfSc0000004	42435	42862	428	497	73	0.8893360160965795	+	UUGGACAAAGCAUCACUAAACAAAGUUU	292	1	478	0	1	16	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:148429-148965	Cluster_7615	Pocillopora_meandrina_HIv1___xfSc0000004	148429	148965	537	517	105	0.015473887814313346	-	GAUAUUGUCAGACAAGAUGCCAAACUGAA	66	13	481	1	8	4	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:199831-200259	Cluster_7616	Pocillopora_meandrina_HIv1___xfSc0000004	199831	200259	429	114	26	0.9912280701754386	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	41	0	112	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:204461-204976	Cluster_7617	Pocillopora_meandrina_HIv1___xfSc0000004	204461	204976	516	643	78	0.6951788491446346	.	UUGGACAAAGCAUCACUAAACAAAGUUU	294	2	622	0	1	17	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:227068-227474	Cluster_7618	Pocillopora_meandrina_HIv1___xfSc0000004	227068	227474	407	81	32	0.9506172839506173	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	26	0	78	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:261818-262245	Cluster_7619	Pocillopora_meandrina_HIv1___xfSc0000004	261818	262245	428	475	47	0.96	+	UUGGACAAAGCAUCACUAAACAAAGUUU	293	0	456	1	0	18	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:332422-333223	Cluster_7620	Pocillopora_meandrina_HIv1___xfSc0000004	332422	333223	802	525	266	0.14476190476190476	-	UGUGAGUUAUGUGACCCUGAACAGC	27	33	421	14	16	27	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:334456-334777	Cluster_7621	Pocillopora_meandrina_HIv1___xfSc0000004	334456	334777	322	294	114	0.02040816326530612	-	UGCUUCUUUCUCGAUUUGUGAGAACUUCUUC	28	1	289	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:78981-79408	Cluster_7622	Pocillopora_meandrina_HIv1___xfSc0000006	78981	79408	428	218	99	0.9541284403669725	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	61	1	214	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:79802-80212	Cluster_7623	Pocillopora_meandrina_HIv1___xfSc0000006	79802	80212	411	185	107	0.5783783783783784	.	ACUGGAUACAAAACUGCUCGAUGC	21	3	127	2	3	7	43	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:105567-106030	Cluster_7624	Pocillopora_meandrina_HIv1___xfSc0000006	105567	106030	464	1413	200	0.10261854210898796	-	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUA	218	15	1250	25	5	30	88	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:37985-38399	Cluster_7625	Pocillopora_meandrina_HIv1___xfSc0000007	37985	38399	415	210	99	0.9238095238095239	+	UAAGAUUUACACACUGAUCGACCAUGU	19	10	186	0	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:38628-39054	Cluster_7626	Pocillopora_meandrina_HIv1___xfSc0000007	38628	39054	427	249	132	0.9678714859437751	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	26	1	236	1	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:39376-39855	Cluster_7627	Pocillopora_meandrina_HIv1___xfSc0000007	39376	39855	480	356	144	0.9073033707865169	+	UCCAAUCACACACAGUUCUCCUGCGGC	70	4	336	0	3	1	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:39939-40366	Cluster_7628	Pocillopora_meandrina_HIv1___xfSc0000007	39939	40366	428	139	51	0.9424460431654677	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	60	0	132	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:40389-40955	Cluster_7629	Pocillopora_meandrina_HIv1___xfSc0000007	40389	40955	567	1243	412	0.8954143201930812	+	UCUCAUGUUGGUACUGCUCACUCGCUG	110	71	1065	9	6	50	42	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:41236-42507	Cluster_7630	Pocillopora_meandrina_HIv1___xfSc0000007	41236	42507	1272	1307	529	0.8990053557765876	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	91	11	1240	5	3	16	32	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:77076-77505	Cluster_7631	Pocillopora_meandrina_HIv1___xfSc0000007	77076	77505	430	123	38	1.0	+	AUUGCAAGCAAACGGCUCGGAGUCUUUUUC	69	23	92	5	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:81664-82093	Cluster_7632	Pocillopora_meandrina_HIv1___xfSc0000007	81664	82093	430	291	49	0.9965635738831615	+	AUUGCAAGCCUUCUUCGUGCAAGCCUGACC	151	12	275	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:125627-126431	Cluster_7633	Pocillopora_meandrina_HIv1___xfSc0000007	125627	126431	805	2733	550	0.015733626051957557	-	UAUUUGAUCUGUCUACCUCUUUAAAGGA	253	27	2600	13	10	11	72	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:248543-248972	Cluster_7634	Pocillopora_meandrina_HIv1___xfSc0000007	248543	248972	430	1809	73	0.9994472084024323	+	AUUGCAAGCAAACGGCUAGGAGUCUUCUU	1191	1	1804	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000012:38929-39359	Cluster_7635	Pocillopora_meandrina_HIv1___xfSc0000012	38929	39359	431	257	85	0.9922178988326849	+	UUGAAUACUUUAAUGACAACGAUGAAAC	56	8	245	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000012:147097-147519	Cluster_7636	Pocillopora_meandrina_HIv1___xfSc0000012	147097	147519	423	200	108	0.495	.	UGGUAAAUGAAGGUUCCUGGAGGCAUGAC	14	10	146	3	6	21	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:13538-14067	Cluster_7637	Pocillopora_meandrina_HIv1___xfSc0000017	13538	14067	530	541	184	0.9833641404805915	+	UGCUCAUAUCUAAUAGGACAACUGCCGUC	62	4	525	1	1	1	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:39350-39877	Cluster_7638	Pocillopora_meandrina_HIv1___xfSc0000017	39350	39877	528	60370	2181	0.0002981613384131191	-	CCCCGUGUUGUAGGCUU	6357	30674	17575	1269	2257	4607	3988	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:39982-40401	Cluster_7639	Pocillopora_meandrina_HIv1___xfSc0000017	39982	40401	420	163	100	0.9938650306748467	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	18	44	92	12	2	6	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:41579-41995	Cluster_7640	Pocillopora_meandrina_HIv1___xfSc0000017	41579	41995	417	116	61	0.0	-	CCGUGUUGUAGGCUU	11	72	18	2	9	9	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:42610-43151	Cluster_7641	Pocillopora_meandrina_HIv1___xfSc0000017	42610	43151	542	2006	736	0.9975074775672981	+	UGUGGGUAACUCGAGCGUAUAA	91	1025	346	170	202	169	94	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:43800-44315	Cluster_7642	Pocillopora_meandrina_HIv1___xfSc0000017	43800	44315	516	8036	1905	0.006097560975609756	-	AGUUAAGCCCUGUCGGGCGGGGUUAGUACUU	217	3489	3146	458	343	286	314	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:44823-45388	Cluster_7643	Pocillopora_meandrina_HIv1___xfSc0000017	44823	45388	566	2263	565	1.0	+	CGUUCGCGCUCGUCCCCGC	206	1113	491	150	268	134	107	N	N	miR-9415_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___xfSc0000017:46013-46437	Cluster_7644	Pocillopora_meandrina_HIv1___xfSc0000017	46013	46437	425	360	129	0.0	-	CCCCGUGUUGUAGGCUU	37	206	83	7	12	27	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:47103-47608	Cluster_7645	Pocillopora_meandrina_HIv1___xfSc0000017	47103	47608	506	10644	1842	0.9989665539270951	+	CAUUGCACUUCGACUG	409	3705	3976	696	729	808	730	N	N	miR-9415_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___xfSc0000017:48235-48651	Cluster_7646	Pocillopora_meandrina_HIv1___xfSc0000017	48235	48651	417	109	58	0.0	-	CCGUGUUGUAGGCUU	11	69	25	3	3	6	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:50458-50978	Cluster_7647	Pocillopora_meandrina_HIv1___xfSc0000017	50458	50978	521	5370	1087	0.0037243947858473	-	CCCGUGUUGUAGGCUU	179	2419	1802	214	273	382	280	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:51490-52056	Cluster_7648	Pocillopora_meandrina_HIv1___xfSc0000017	51490	52056	567	15790	1575	0.9994933502216593	+	CGUUCGCGCUCGUCCCCGC	2841	10238	1795	1209	1530	671	347	N	N	miR-9415_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___xfSc0000017:52682-53105	Cluster_7649	Pocillopora_meandrina_HIv1___xfSc0000017	52682	53105	424	311	105	0.0	-	CCCCGUGUUGUAGGCUU	36	181	65	7	13	27	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:54903-55423	Cluster_7650	Pocillopora_meandrina_HIv1___xfSc0000017	54903	55423	521	13165	1106	0.0001519179642992784	-	CCCCGUGUUGUAGGCUU	1629	7969	2816	326	501	803	750	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:55536-55971	Cluster_7651	Pocillopora_meandrina_HIv1___xfSc0000017	55536	55971	436	172	112	0.9825581395348837	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	65	83	4	8	9	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:57122-57547	Cluster_7652	Pocillopora_meandrina_HIv1___xfSc0000017	57122	57547	426	452	155	0.0	-	CCCCGUGUUGUAGGCUU	33	252	115	12	19	27	27	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:57755-58164	Cluster_7653	Pocillopora_meandrina_HIv1___xfSc0000017	57755	58164	410	178	121	0.9943820224719101	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	43	90	7	13	12	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:59339-59761	Cluster_7654	Pocillopora_meandrina_HIv1___xfSc0000017	59339	59761	423	238	80	0.0	-	CCCCGUGUUGUAGGCUU	26	140	52	4	5	26	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:59972-60382	Cluster_7655	Pocillopora_meandrina_HIv1___xfSc0000017	59972	60382	411	182	113	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	69	81	4	10	9	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:61559-61983	Cluster_7656	Pocillopora_meandrina_HIv1___xfSc0000017	61559	61983	425	409	132	0.0	-	CCCCGUGUUGUAGGCUU	41	237	99	15	21	20	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:62588-63035	Cluster_7657	Pocillopora_meandrina_HIv1___xfSc0000017	62588	63035	448	447	181	0.9977628635346756	+	AUACUUACCUGACGCGG	46	264	84	25	26	32	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:63779-64204	Cluster_7658	Pocillopora_meandrina_HIv1___xfSc0000017	63779	64204	426	711	182	0.0	-	CCCCGUGUUGUAGGCUU	74	413	144	19	32	62	41	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:64411-64821	Cluster_7659	Pocillopora_meandrina_HIv1___xfSc0000017	64411	64821	411	179	116	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	19	49	87	8	12	11	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:65997-66423	Cluster_7660	Pocillopora_meandrina_HIv1___xfSc0000017	65997	66423	427	701	196	0.0	-	CCCCGUGUUGUAGGCUU	58	380	175	16	33	55	42	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:66629-67066	Cluster_7661	Pocillopora_meandrina_HIv1___xfSc0000017	66629	67066	438	247	157	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	85	106	9	19	15	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:68215-68640	Cluster_7662	Pocillopora_meandrina_HIv1___xfSc0000017	68215	68640	426	619	195	0.0	-	CCCCGUGUUGUAGGCUU	67	362	138	20	21	49	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:68847-69809	Cluster_7663	Pocillopora_meandrina_HIv1___xfSc0000017	68847	69809	963	1982	786	0.9994954591321897	+	CGUUCGCGCUCGUCCCCGC	95	952	546	117	157	111	99	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:70434-70859	Cluster_7664	Pocillopora_meandrina_HIv1___xfSc0000017	70434	70859	426	726	185	0.0	-	CCGUGUUGUAGGCUU	57	417	171	6	36	59	37	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:71066-71503	Cluster_7665	Pocillopora_meandrina_HIv1___xfSc0000017	71066	71503	438	232	146	0.9956896551724138	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	81	100	15	12	16	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:72652-73077	Cluster_7666	Pocillopora_meandrina_HIv1___xfSc0000017	72652	73077	426	708	189	0.002824858757062147	-	CCCCGUGUUGUAGGCUU	62	426	161	13	25	49	34	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:73284-73723	Cluster_7667	Pocillopora_meandrina_HIv1___xfSc0000017	73284	73723	440	246	157	0.991869918699187	+	GAUACGCUGCUCAUUGA	11	88	108	11	8	22	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:74870-75295	Cluster_7668	Pocillopora_meandrina_HIv1___xfSc0000017	74870	75295	426	612	163	0.0	-	CCGUGUUGUAGGCUU	53	331	155	15	20	45	46	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:75502-76050	Cluster_7669	Pocillopora_meandrina_HIv1___xfSc0000017	75502	76050	549	291	167	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	18	101	122	11	22	21	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:77088-77512	Cluster_7670	Pocillopora_meandrina_HIv1___xfSc0000017	77088	77512	425	437	159	0.002288329519450801	-	CCCCGUGUUGUAGGCUU	38	228	114	12	11	38	34	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:77720-78161	Cluster_7671	Pocillopora_meandrina_HIv1___xfSc0000017	77720	78161	442	260	155	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	105	97	8	17	19	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:79307-79732	Cluster_7672	Pocillopora_meandrina_HIv1___xfSc0000017	79307	79732	426	725	193	0.0	-	CCCCGUGUUGUAGGCUU	72	396	174	14	35	61	45	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:79939-80378	Cluster_7673	Pocillopora_meandrina_HIv1___xfSc0000017	79939	80378	440	236	147	0.9957627118644068	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	96	92	8	9	19	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:81525-81950	Cluster_7674	Pocillopora_meandrina_HIv1___xfSc0000017	81525	81950	426	677	178	0.0014771048744460858	-	CCCCGUGUUGUAGGCUU	62	390	158	9	27	53	40	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:82157-82567	Cluster_7675	Pocillopora_meandrina_HIv1___xfSc0000017	82157	82567	411	220	141	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	74	90	10	18	11	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:83743-84168	Cluster_7676	Pocillopora_meandrina_HIv1___xfSc0000017	83743	84168	426	739	202	0.0	-	CCGUGUUGUAGGCUU	61	398	200	10	38	58	35	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:84375-84814	Cluster_7677	Pocillopora_meandrina_HIv1___xfSc0000017	84375	84814	440	240	144	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	101	83	13	18	13	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:85961-86386	Cluster_7678	Pocillopora_meandrina_HIv1___xfSc0000017	85961	86386	426	521	160	0.0	-	CCCCGUGUUGUAGGCUU	45	285	138	13	15	35	35	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:86593-87035	Cluster_7679	Pocillopora_meandrina_HIv1___xfSc0000017	86593	87035	443	256	157	0.99609375	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	99	96	10	16	24	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:88178-88697	Cluster_7680	Pocillopora_meandrina_HIv1___xfSc0000017	88178	88697	520	5674	1016	0.00035248501938667606	-	CCCCGUGUUGUAGGCUU	326	2471	1898	143	320	456	386	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:88813-89220	Cluster_7681	Pocillopora_meandrina_HIv1___xfSc0000017	88813	89220	408	162	102	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	58	76	4	11	5	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:89226-89774	Cluster_7682	Pocillopora_meandrina_HIv1___xfSc0000017	89226	89774	549	1296	552	0.9992283950617284	+	CUCGAGCGUAUAAUUUCUGGUAGUGGGGG	42	459	439	103	104	113	78	N	N	miR-9415_Nematostella_vectensis_Moran_et_al._2014_NA
Pocillopora_meandrina_HIv1___xfSc0000017:90404-90825	Cluster_7683	Pocillopora_meandrina_HIv1___xfSc0000017	90404	90825	422	242	84	0.004132231404958678	-	CCCCGUGUUGUAGGCUU	29	163	44	2	7	13	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:92620-93037	Cluster_7684	Pocillopora_meandrina_HIv1___xfSc0000017	92620	93037	418	188	76	0.0	-	CCGUGUUGUAGGCUU	22	125	35	3	5	14	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:93254-93659	Cluster_7685	Pocillopora_meandrina_HIv1___xfSc0000017	93254	93659	406	160	112	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	66	68	4	5	7	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:94838-95251	Cluster_7686	Pocillopora_meandrina_HIv1___xfSc0000017	94838	95251	414	75	47	0.0	-	CCCCGUGUUGUAGGCUU	7	39	22	0	4	6	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:97055-97573	Cluster_7687	Pocillopora_meandrina_HIv1___xfSc0000017	97055	97573	519	13895	898	0.0004318100035984167	-	CCCCGUGUUGUAGGCUU	1986	10309	402	458	833	1735	158	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:97674-98247	Cluster_7688	Pocillopora_meandrina_HIv1___xfSc0000017	97674	98247	574	9466	1129	0.999577435030636	+	CAAGUGUAGUAUCUGUUCU	537	3821	3826	199	590	688	342	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000021:6767-7195	Cluster_7689	Pocillopora_meandrina_HIv1___xfSc0000021	6767	7195	429	178	58	0.02247191011235955	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	34	5	133	3	2	20	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000021:7791-8219	Cluster_7690	Pocillopora_meandrina_HIv1___xfSc0000021	7791	8219	429	1948	96	0.009753593429158111	-	UGAAACUCUGAUCUGAAAAUAUUUUUA	1146	7	1935	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000058:8314-8834	Cluster_7691	Pocillopora_meandrina_HIv1___xfSc0000058	8314	8834	521	511	190	0.0410958904109589	-	UUUUCGGCUACUUCUGUCCAUUUUUGGC	62	2	499	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000058:10007-10444	Cluster_7692	Pocillopora_meandrina_HIv1___xfSc0000058	10007	10444	438	311	144	0.12861736334405144	-	UACAGCCGAUAUGGAAGCAUUUAAUUC	28	8	283	0	2	7	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000059:13829-14262	Cluster_7693	Pocillopora_meandrina_HIv1___xfSc0000059	13829	14262	434	292	102	1.0	+	UGUACUCUGCCGAUAGCUUGCGAUUUUCAUC	51	1	283	0	4	0	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000146:258-1373	Cluster_7694	Pocillopora_meandrina_HIv1___xfSc0000146	258	1373	1116	4123	842	0.8612660683967984	+	UACUUUCUGAUUGACUUGGAGUGUGGGG	750	55	3604	18	18	137	291	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000146:25017-25637	Cluster_7695	Pocillopora_meandrina_HIv1___xfSc0000146	25017	25637	621	810	178	0.3148148148148148	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	151	3	658	0	5	118	26	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:3130-3572	Cluster_7696	Pocillopora_meandrina_HIv1___xfSc0000168	3130	3572	443	345	160	0.17101449275362318	-	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	55	6	295	2	7	7	28	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:3831-4338	Cluster_7697	Pocillopora_meandrina_HIv1___xfSc0000168	3831	4338	508	587	279	0.0868824531516184	-	UCUUCUUUGGACUGUUUUUUGCAUAAAGGA	34	2	548	2	2	9	24	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:6836-7264	Cluster_7698	Pocillopora_meandrina_HIv1___xfSc0000168	6836	7264	429	608	169	0.019736842105263157	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	151	1	597	0	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:15158-15584	Cluster_7699	Pocillopora_meandrina_HIv1___xfSc0000168	15158	15584	427	177	84	0.005649717514124294	-	UGUACUUCUCUGACCACUCUAGUUCAGGA	44	8	160	4	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:15952-16965	Cluster_7700	Pocillopora_meandrina_HIv1___xfSc0000168	15952	16965	1014	1049	396	0.0019065776930409914	-	UCUUGACUUAUGUGGCCUGCAGUGGACUGC	43	19	1000	5	2	15	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:17735-18328	Cluster_7701	Pocillopora_meandrina_HIv1___xfSc0000168	17735	18328	594	399	193	0.0	-	UUGGCUGAUCUUCUUUAUUAUAUGUGAGU	37	3	390	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:21430-22809	Cluster_7702	Pocillopora_meandrina_HIv1___xfSc0000168	21430	22809	1380	1378	525	0.14876632801161102	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	88	41	1252	7	6	29	43	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:22905-23332	Cluster_7703	Pocillopora_meandrina_HIv1___xfSc0000168	22905	23332	428	390	96	0.041025641025641026	-	UACGUGUAGACUGAGCCAUUGCCUAGU	110	5	329	3	1	2	50	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:31977-32817	Cluster_7704	Pocillopora_meandrina_HIv1___xfSc0000168	31977	32817	841	1273	384	0.1516103692065986	-	UAAACUACUAACGGCUUUUGACAAUGCUUU	106	22	1167	5	12	29	38	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000175:30110-30936	Cluster_7705	Pocillopora_meandrina_HIv1___xfSc0000175	30110	30936	827	401	118	0.9900249376558603	+	UAGGACAACUGAGAAUCCACGUAGACUC	107	0	391	1	6	1	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000206:12993-13422	Cluster_7706	Pocillopora_meandrina_HIv1___xfSc0000206	12993	13422	430	15740	180	0.9979034307496824	+	UACCAAGGUCUUGUAGUCUAGUACAACU	6023	13	15655	2	28	5	37	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000212:2286-2714	Cluster_7707	Pocillopora_meandrina_HIv1___xfSc0000212	2286	2714	429	211	114	0.9004739336492891	+	UGACUUAUAACAGCGACUUUGCACUUUUA	37	6	196	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:18834-19448	Cluster_7708	Pocillopora_meandrina_HIv1___xfSc0000217	18834	19448	615	515	150	0.920388349514563	+	UGACUGUCGGUCAACUGUCGGCC	52	12	392	1	3	57	50	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:24561-24987	Cluster_7709	Pocillopora_meandrina_HIv1___xfSc0000217	24561	24987	427	179	53	1.0	+	ACAGAUCGGAUCACAGAUCAUGUGAGC	44	38	137	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:27133-27697	Cluster_7710	Pocillopora_meandrina_HIv1___xfSc0000217	27133	27697	565	209	67	0.023923444976076555	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUAAG	24	3	206	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:33134-33560	Cluster_7711	Pocillopora_meandrina_HIv1___xfSc0000217	33134	33560	427	155	69	0.0967741935483871	-	UGAUCUGAUUUUACUCGUUGUAGAUAAAAC	19	2	142	0	4	4	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:33613-34458	Cluster_7712	Pocillopora_meandrina_HIv1___xfSc0000217	33613	34458	846	743	364	0.07133243606998654	-	UGAUCUGGUUUGAGUCUUGUAUUAGAAC	24	18	694	2	3	8	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:34503-34927	Cluster_7713	Pocillopora_meandrina_HIv1___xfSc0000217	34503	34927	425	93	22	0.010752688172043012	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	29	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000228:24353-24851	Cluster_7714	Pocillopora_meandrina_HIv1___xfSc0000228	24353	24851	499	592	328	0.3125	.	UGAUCUACAGCUCUUAGGAUGUCAUUUGA	58	46	493	7	11	14	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000237:9779-10472	Cluster_7715	Pocillopora_meandrina_HIv1___xfSc0000237	9779	10472	694	1793	487	0.0005577244841048522	-	GUUAGUGAUGAUGAAGUAAAAGGUCUGAUGU	371	237	1233	75	67	86	95	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000262:25212-25643	Cluster_7716	Pocillopora_meandrina_HIv1___xfSc0000262	25212	25643	432	377	89	0.9124668435013262	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	45	1	375	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000264:26323-26751	Cluster_7717	Pocillopora_meandrina_HIv1___xfSc0000264	26323	26751	429	131	33	0.16793893129770993	-	UGUAUCUUCAGAGGACUUCAGGUCGCUCA	52	2	125	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000275:3122-3552	Cluster_7718	Pocillopora_meandrina_HIv1___xfSc0000275	3122	3552	431	123	37	0.024390243902439025	-	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	56	1	120	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000284:20495-20921	Cluster_7719	Pocillopora_meandrina_HIv1___xfSc0000284	20495	20921	427	121	34	0.09090909090909091	-	UAGGACUAACAUCUCGACUUCUUA	22	1	93	0	0	1	26	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:8594-9023	Cluster_7720	Pocillopora_meandrina_HIv1___xfSc0000343	8594	9023	430	420	143	0.8166666666666667	+	UGAAUGUUGCGAAGCUCUUCGUCCAAAAGA	127	11	378	8	1	11	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:9872-10368	Cluster_7721	Pocillopora_meandrina_HIv1___xfSc0000343	9872	10368	497	864	206	0.4340277777777778	.	AUUCAUGUUAGGUGGUAGAGGUGU	123	60	397	11	95	93	208	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:11559-12139	Cluster_7722	Pocillopora_meandrina_HIv1___xfSc0000343	11559	12139	581	2312	447	0.8170415224913494	+	UUUCCGUUGCAUUAGAGGACUUCUUGUU	660	50	2100	32	12	28	90	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:78-509	Cluster_7723	Pocillopora_meandrina_HIv1___xfSc0000376	78	509	432	616	84	0.9983766233766234	+	UAUAAUAACUGUUGGUUUCCUGGACAAUC	128	2	589	8	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:1159-1588	Cluster_7724	Pocillopora_meandrina_HIv1___xfSc0000376	1159	1588	430	147	59	1.0	+	UGCUCUUAAGGAGUCGUCCGAUUUUGAAUU	21	1	144	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:1629-2225	Cluster_7725	Pocillopora_meandrina_HIv1___xfSc0000376	1629	2225	597	632	169	0.9762658227848101	+	UAUGUCGUGUGUGCACUUUGGUGACUGC	84	9	592	5	3	10	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:3024-3453	Cluster_7726	Pocillopora_meandrina_HIv1___xfSc0000376	3024	3453	430	1020	73	1.0	+	UGCGAAACCGCGUGUAAAUUCUCUACUAUU	485	0	1013	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:11926-12345	Cluster_7727	Pocillopora_meandrina_HIv1___xfSc0000376	11926	12345	420	138	82	1.0	+	UUUCCUUUCUUUUGUACUUGUCGGACGUGA	13	4	129	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:13856-14560	Cluster_7728	Pocillopora_meandrina_HIv1___xfSc0000376	13856	14560	705	196	66	1.0	+	UGAAACGGUCAAUCUCCUUGAAAUCUGGGA	50	2	191	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:14913-15441	Cluster_7729	Pocillopora_meandrina_HIv1___xfSc0000376	14913	15441	529	483	152	0.2422360248447205	.	CAGUAUCACAAGAUGGGAAUGAGG	47	17	254	28	11	59	114	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:21858-22264	Cluster_7730	Pocillopora_meandrina_HIv1___xfSc0000376	21858	22264	407	102	39	0.9509803921568627	+	UGUGCAAGCACCAAGUUGAAUGAGAGC	16	0	96	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:23488-23914	Cluster_7731	Pocillopora_meandrina_HIv1___xfSc0000376	23488	23914	427	247	121	0.8704453441295547	+	UGUGUGCAUUUAUUCCCCUUUCUGAAAU	33	2	226	1	2	5	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:24191-24614	Cluster_7732	Pocillopora_meandrina_HIv1___xfSc0000376	24191	24614	424	174	45	0.034482758620689655	-	AUCUUUCCGAGGCUCUGAGUGGG	37	2	69	14	13	64	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:27819-28554	Cluster_7733	Pocillopora_meandrina_HIv1___xfSc0000376	27819	28554	736	406	164	0.9507389162561576	+	UACGUGUAGAAAGCCUUCUCUGACAUC	26	6	382	1	3	8	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:29864-30418	Cluster_7734	Pocillopora_meandrina_HIv1___xfSc0000376	29864	30418	555	615	300	0.9089430894308943	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	57	7	580	0	9	7	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:33482-33911	Cluster_7735	Pocillopora_meandrina_HIv1___xfSc0000376	33482	33911	430	645	184	0.9813953488372092	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	146	3	630	2	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:35966-36394	Cluster_7736	Pocillopora_meandrina_HIv1___xfSc0000376	35966	36394	429	211	83	0.9146919431279621	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	34	0	193	0	1	12	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:41523-41954	Cluster_7737	Pocillopora_meandrina_HIv1___xfSc0000376	41523	41954	432	376	150	0.9361702127659575	+	UGUUUUGGUGUGUUCAAGUAUCUUUGA	36	5	358	4	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:45892-46320	Cluster_7738	Pocillopora_meandrina_HIv1___xfSc0000376	45892	46320	429	92	18	1.0	+	UCAAAUCUGUACCAGUGCCACUCAGCAUC	63	1	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000423:29248-29693	Cluster_7739	Pocillopora_meandrina_HIv1___xfSc0000423	29248	29693	446	1667	260	0.07378524295140972	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCU	145	22	1457	13	39	108	28	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000436:26683-27108	Cluster_7740	Pocillopora_meandrina_HIv1___xfSc0000436	26683	27108	426	140	57	0.0	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	15	1	133	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000436:42973-43402	Cluster_7741	Pocillopora_meandrina_HIv1___xfSc0000436	42973	43402	430	769	141	0.9908972691807543	+	UAGACAUGACAUCAGCCUCUGAGCCAACUC	268	3	760	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:3977-4487	Cluster_7742	Pocillopora_meandrina_HIv1___xfSc0000445	3977	4487	511	1301	340	0.13143735588009223	-	UGAUCCGCUCCCAUUCGAACUUUAGGC	131	6	1188	5	11	34	57	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:21289-22084	Cluster_7743	Pocillopora_meandrina_HIv1___xfSc0000445	21289	22084	796	409	193	0.13202933985330073	-	UGUUCCUGAACUUCGCGCGAAAACUCGA	37	1	373	0	1	8	26	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:22475-22901	Cluster_7744	Pocillopora_meandrina_HIv1___xfSc0000445	22475	22901	427	189	86	0.19047619047619047	-	UGAACAAGGAAACACCAAAUAAUAUCUC	18	3	167	2	1	5	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:1-800	Cluster_7745	Pocillopora_meandrina_HIv1___xfSc0000477	1	800	800	706	297	0.07365439093484419	-	UGAUCUAAAUUUAACAAUCUUGCCUUUU	77	6	656	5	4	5	30	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:846-1407	Cluster_7746	Pocillopora_meandrina_HIv1___xfSc0000477	846	1407	562	3254	531	0.013521819299323909	-	UGUGAUAUUCCGAACACUUGAAUGAGUCA	221	14	3086	9	11	50	84	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:1796-2238	Cluster_7747	Pocillopora_meandrina_HIv1___xfSc0000477	1796	2238	443	1555	242	0.02829581993569132	-	UUCGAUCUAUACCAUCUGGAGGCUAAUU	308	8	1515	3	2	4	23	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:19493-19920	Cluster_7748	Pocillopora_meandrina_HIv1___xfSc0000540	19493	19920	428	109	39	0.944954128440367	+	UCUAGCAGAUCGUACUCCUCAAGGUGCU	23	2	102	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:23087-23501	Cluster_7749	Pocillopora_meandrina_HIv1___xfSc0000540	23087	23501	415	163	31	1.0	+	UUGGAAUUCAACAGA	106	112	51	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:39655-40079	Cluster_7750	Pocillopora_meandrina_HIv1___xfSc0000540	39655	40079	425	288	65	0.09027777777777778	-	AUGGACAGAACACAGGAAGUGCU	61	7	107	6	13	121	34	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:41358-41787	Cluster_7751	Pocillopora_meandrina_HIv1___xfSc0000540	41358	41787	430	356	82	0.9803370786516854	+	UAAGAUAUCGUUAACAACUCGAAGAAGCG	65	2	340	2	4	5	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:10286-10858	Cluster_7752	Pocillopora_meandrina_HIv1___xfSc0000555	10286	10858	573	2126	257	0.9995296331138288	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	520	1	2112	1	1	6	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:20846-21272	Cluster_7753	Pocillopora_meandrina_HIv1___xfSc0000555	20846	21272	427	179	72	0.9720670391061452	+	UUUCCUAUUUUCAGUUAAAAACUCUUAUU	20	1	176	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:21513-21935	Cluster_7754	Pocillopora_meandrina_HIv1___xfSc0000555	21513	21935	423	227	86	0.973568281938326	+	UGUCAUGUCAACGUCUGGUUGGAACCAUC	40	3	222	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:22032-22721	Cluster_7755	Pocillopora_meandrina_HIv1___xfSc0000555	22032	22721	690	762	325	0.905511811023622	+	UAUGAUUGAAUUGACUCGUGGUAGCUAUU	25	20	706	1	6	11	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:22903-23331	Cluster_7756	Pocillopora_meandrina_HIv1___xfSc0000555	22903	23331	429	187	73	0.9786096256684492	+	UUGGAGAUGAUCUUUGCGAUGACAUUGUG	31	5	177	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:34374-34813	Cluster_7757	Pocillopora_meandrina_HIv1___xfSc0000555	34374	34813	440	2403	333	0.9737827715355806	+	UAAUUUAUCCAUGUAUUCUUGAAGACGU	302	9	2339	2	2	29	22	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:35795-36770	Cluster_7758	Pocillopora_meandrina_HIv1___xfSc0000555	35795	36770	976	712	339	0.9171348314606742	+	UUCGAUCUUUUCUGUGUAAUGUGUAGC	24	10	661	6	3	9	23	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:39714-40144	Cluster_7759	Pocillopora_meandrina_HIv1___xfSc0000555	39714	40144	431	578	195	0.06401384083044982	-	UAACGUAGUGGUAUCCAUUGAACAAGUUC	85	10	485	4	1	8	70	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:40403-41449	Cluster_7760	Pocillopora_meandrina_HIv1___xfSc0000555	40403	41449	1047	891	398	0.25813692480359146	.	ACGUAUUGCAAGCUUGAAAUUAACCACA	49	15	839	6	1	13	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000566:34959-35386	Cluster_7761	Pocillopora_meandrina_HIv1___xfSc0000566	34959	35386	428	134	36	0.9925373134328358	+	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	24	1	133	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:366-1215	Cluster_7762	Pocillopora_meandrina_HIv1___xfSc0000567	366	1215	850	353	162	0.11331444759206799	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	50	13	323	2	3	7	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:6059-8282	Cluster_7763	Pocillopora_meandrina_HIv1___xfSc0000567	6059	8282	2224	20987	2533	0.9711249821317959	+	UCCGAGACUGUAGAUCCGAGUUGAUCCA	3183	103	20179	91	101	177	336	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:8787-9268	Cluster_7764	Pocillopora_meandrina_HIv1___xfSc0000567	8787	9268	482	360	164	0.9472222222222222	+	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	26	5	342	2	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:9270-10516	Cluster_7765	Pocillopora_meandrina_HIv1___xfSc0000567	9270	10516	1247	1742	815	0.8289322617680827	+	UGUAACGGAACAGACUCCAAUAUACA	45	37	1521	13	20	42	109	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:25703-26133	Cluster_7766	Pocillopora_meandrina_HIv1___xfSc0000567	25703	26133	431	159	46	0.9811320754716981	+	UGCAUGAUCUGUCUAAGCUAAGGAAACGAGC	41	5	153	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:42864-43305	Cluster_7767	Pocillopora_meandrina_HIv1___xfSc0000567	42864	43305	442	460	178	0.9826086956521739	+	UGCUUUCUGUUCUCUUGUUCUCCAACAAA	58	1	447	1	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000570:34339-34764	Cluster_7768	Pocillopora_meandrina_HIv1___xfSc0000570	34339	34764	426	118	32	1.0	+	AACUACUGCUCGUACUCUAGAUGACAAUCA	18	1	116	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:18000-18417	Cluster_7769	Pocillopora_meandrina_HIv1___xfSc0000579	18000	18417	418	286	199	0.9230769230769231	+	UCAGACACGUGGAUACUUGCGAUGAAGU	12	2	262	0	4	8	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:18773-19202	Cluster_7770	Pocillopora_meandrina_HIv1___xfSc0000579	18773	19202	430	246	111	0.9186991869918699	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	23	1	228	2	1	11	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:19932-20358	Cluster_7771	Pocillopora_meandrina_HIv1___xfSc0000579	19932	20358	427	163	57	0.6748466257668712	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	29	0	126	1	1	4	31	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:27718-28147	Cluster_7772	Pocillopora_meandrina_HIv1___xfSc0000583	27718	28147	430	623	174	0.04012841091492777	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	91	4	593	0	2	19	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:28385-28811	Cluster_7773	Pocillopora_meandrina_HIv1___xfSc0000583	28385	28811	427	248	136	0.125	-	UGAGUCGAGGUUAUUCACAAUACGAGC	32	6	218	1	2	11	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:29248-30468	Cluster_7774	Pocillopora_meandrina_HIv1___xfSc0000583	29248	30468	1221	2030	497	0.19507389162561575	-	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	489	17	1905	6	14	24	64	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:31472-32249	Cluster_7775	Pocillopora_meandrina_HIv1___xfSc0000583	31472	32249	778	346	137	0.2023121387283237	.	UAUACUCCAAAGGUUCUGAAAACGAAUG	39	5	273	2	6	34	26	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:33456-33890	Cluster_7776	Pocillopora_meandrina_HIv1___xfSc0000583	33456	33890	435	1180	141	0.022033898305084745	-	UAACUUCAACUAGAUCGAAAUACUCGUGA	629	164	982	6	4	15	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000596:34758-35844	Cluster_7777	Pocillopora_meandrina_HIv1___xfSc0000596	34758	35844	1087	1696	510	0.8891509433962265	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	198	10	1602	11	14	29	30	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:1-6639	Cluster_7778	Pocillopora_meandrina_HIv1___xfSc0000616	1	6639	6639	8456028	151648	0.00021038246325579812	-	CUCGGGCUGAGACUUGAAGCG	1454486	2551410	2230177	1858462	587493	461258	767228	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:9553-10876	Cluster_7779	Pocillopora_meandrina_HIv1___xfSc0000616	9553	10876	1324	580873	28470	0.0005026916382754922	-	CACUACCGAUAGCCAACUCGAACGUUUCCG	72226	87916	402200	18876	21781	30322	19778	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:10878-15450	Cluster_7780	Pocillopora_meandrina_HIv1___xfSc0000616	10878	15450	4573	5809832	99519	5.198084901594401e-05	-	CUCGGGCUGAGACUUGAAGCG	1454980	1236796	1168173	1806005	521300	384832	692726	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:24459-24889	Cluster_7781	Pocillopora_meandrina_HIv1___xfSc0000616	24459	24889	431	11138	411	0.9999102172741965	+	GGGGGUAUAGCUCAGUGGUAGA	3792	1971	3700	555	4320	176	416	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000621:37651-38093	Cluster_7782	Pocillopora_meandrina_HIv1___xfSc0000621	37651	38093	443	246	111	0.8780487804878049	+	UCCGUCUAUCUCCGCUCGAACCUUUGGAU	29	6	204	1	3	4	28	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000655:10705-11254	Cluster_7783	Pocillopora_meandrina_HIv1___xfSc0000655	10705	11254	550	352	116	0.6931818181818182	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	65	20	309	1	8	7	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000655:14051-14479	Cluster_7784	Pocillopora_meandrina_HIv1___xfSc0000655	14051	14479	429	150	44	0.0	-	UCUGGAAGCAUUAUCUGCCGGUCUGCCUG	50	3	145	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:7791-8388	Cluster_7785	Pocillopora_meandrina_HIv1___xfSc0000704	7791	8388	598	315	92	0.8031746031746032	+	UGGAAUCAUGCCUUGCAUCUGUUAUAAC	89	3	272	0	1	24	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:8925-9754	Cluster_7786	Pocillopora_meandrina_HIv1___xfSc0000704	8925	9754	830	644	260	0.5201863354037267	.	UAUAUGGAGUCGUUCUCUGCUGAAGAUG	39	42	481	33	4	23	61	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:21980-22444	Cluster_7787	Pocillopora_meandrina_HIv1___xfSc0000704	21980	22444	465	279	157	0.11469534050179211	-	UUCGUCGAACUUCUUCAGGACUUGUGA	14	1	273	0	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:22891-23317	Cluster_7788	Pocillopora_meandrina_HIv1___xfSc0000704	22891	23317	427	140	82	0.14285714285714285	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	13	2	125	1	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:25875-26481	Cluster_7789	Pocillopora_meandrina_HIv1___xfSc0000704	25875	26481	607	562	81	0.9911032028469751	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	129	1	542	1	1	7	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:26866-27293	Cluster_7790	Pocillopora_meandrina_HIv1___xfSc0000704	26866	27293	428	200	82	0.97	+	UAGGGACCUCACGGCUUACUGCUGAAGU	27	14	183	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:28347-28833	Cluster_7791	Pocillopora_meandrina_HIv1___xfSc0000704	28347	28833	487	4973	434	0.9698371204504324	+	UAUGUUGAACGAGAACUGAGGACCUCGAUC	837	43	4767	15	32	57	59	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000705:276-695	Cluster_7792	Pocillopora_meandrina_HIv1___xfSc0000705	276	695	420	253	26	0.0	-	GUGAAAGGCUAAACAAACUU	56	236	0	11	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000705:30667-31330	Cluster_7793	Pocillopora_meandrina_HIv1___xfSc0000705	30667	31330	664	507	108	0.9112426035502958	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	268	1	490	0	0	3	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000716:16771-17199	Cluster_7794	Pocillopora_meandrina_HIv1___xfSc0000716	16771	17199	429	260	76	0.9576923076923077	+	AUCUUCUGAAUCAAGAAAAAAGAGGCUGG	69	1	255	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000765:14970-15396	Cluster_7795	Pocillopora_meandrina_HIv1___xfSc0000765	14970	15396	427	119	22	0.0	-	AAAUCAAACAUAUCGCGGCAAGGGUGGA	63	6	106	1	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000811:4425-4855	Cluster_7796	Pocillopora_meandrina_HIv1___xfSc0000811	4425	4855	431	1453	82	0.9993117687543015	+	UUGGAAUUCGAAGCAAGUAACAAUUGACAGG	385	0	1453	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000812:24713-25141	Cluster_7797	Pocillopora_meandrina_HIv1___xfSc0000812	24713	25141	429	353	47	0.0113314447592068	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	252	1	351	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000824:3699-4115	Cluster_7798	Pocillopora_meandrina_HIv1___xfSc0000824	3699	4115	417	89	34	0.0	-	ACGAAAAUAGUAGAAUGAAGUCAGAAGCA	15	0	84	0	0	5	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000824:11828-13068	Cluster_7799	Pocillopora_meandrina_HIv1___xfSc0000824	11828	13068	1241	13451	1181	0.01553787822466731	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2103	79	13106	27	82	77	80	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:18635-19900	Cluster_7800	Pocillopora_meandrina_HIv1___xfSc0000836	18635	19900	1266	25851	2776	0.8349386870914085	+	UGAUGAAUUCACAUGUUGACGAACACUUGA	3410	383	22298	213	556	852	1549	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:31963-33875	Cluster_7801	Pocillopora_meandrina_HIv1___xfSc0000836	31963	33875	1913	5537	1475	0.9378724941303955	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	435	31	5295	22	29	46	114	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:34577-35192	Cluster_7802	Pocillopora_meandrina_HIv1___xfSc0000836	34577	35192	616	295	136	0.9593220338983051	+	UCAUCUCGGUUUUUGCAAAAUGUCAA	16	1	269	2	2	4	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:1884-2309	Cluster_7803	Pocillopora_meandrina_HIv1___xfSc0000840	1884	2309	426	161	66	0.7763975155279503	.	AUUGAUUCUAUUUUGUACGGCCUAGU	44	8	138	3	3	6	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:7618-8047	Cluster_7804	Pocillopora_meandrina_HIv1___xfSc0000840	7618	8047	430	1235	55	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUG	989	0	1235	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:28786-29216	Cluster_7805	Pocillopora_meandrina_HIv1___xfSc0000840	28786	29216	431	268	94	0.6455223880597015	.	UACCGUGAGACUGAAGAACAAAAUUCAAA	37	2	240	0	6	2	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:31263-31871	Cluster_7806	Pocillopora_meandrina_HIv1___xfSc0000868	31263	31871	609	604	188	0.9519867549668874	+	UUCAGUUACGCUUUCGCUCUAAUAGUUGUU	134	14	570	1	0	6	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:32925-34952	Cluster_7807	Pocillopora_meandrina_HIv1___xfSc0000868	32925	34952	2028	3838	1249	0.8593017196456487	+	UCUUCCAUCUUCAGUGCGUACUGCGUAU	167	56	3443	21	34	147	137	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:35232-35930	Cluster_7808	Pocillopora_meandrina_HIv1___xfSc0000868	35232	35930	699	517	219	0.9381044487427466	+	UGUGUCAGAACCCGGCUUGCAUAAGUGA	100	8	480	1	7	19	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:35955-36381	Cluster_7809	Pocillopora_meandrina_HIv1___xfSc0000868	35955	36381	427	193	89	0.917098445595855	+	UGUUAAGUUUGAUGUUCCGCUCUCUGCGUC	12	3	185	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:36592-36831	Cluster_7810	Pocillopora_meandrina_HIv1___xfSc0000868	36592	36831	240	573	33	0.9790575916230366	+	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	528	2	563	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000886:1775-2194	Cluster_7811	Pocillopora_meandrina_HIv1___xfSc0000886	1775	2194	420	148	97	0.3918918918918919	.	UGUGACACUUUGAGACACUCGUGAGACA	20	3	130	1	0	7	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000890:8258-8879	Cluster_7812	Pocillopora_meandrina_HIv1___xfSc0000890	8258	8879	622	3989	434	0.05916269741789922	-	UUUGAUCUUGAAAUUAUGAUACCUGGAA	1734	17	3912	9	5	24	22	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000892:18825-19245	Cluster_7813	Pocillopora_meandrina_HIv1___xfSc0000892	18825	19245	421	94	30	0.0	-	CUUGAAUCGUUUGGACUGCGCCA	27	6	0	10	34	37	7	23	N	NA
Pocillopora_meandrina_HIv1___xfSc0000952:31665-32079	Cluster_7814	Pocillopora_meandrina_HIv1___xfSc0000952	31665	32079	415	198	5	0.010101010101010102	-	CGUGGAAGGUAGGCU	171	198	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:24300-24708	Cluster_7815	Pocillopora_meandrina_HIv1___xfSc0000953	24300	24708	409	197	127	0.36548223350253806	.	ACUGGAUACAAAACUGCUCGAUGC	17	2	150	0	3	11	31	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:24781-25527	Cluster_7816	Pocillopora_meandrina_HIv1___xfSc0000953	24781	25527	747	1262	321	0.05229793977812995	-	UGAGAUUUACGAUUGCAUAUAUUAAGUG	202	12	1219	1	3	9	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:30618-31037	Cluster_7817	Pocillopora_meandrina_HIv1___xfSc0000953	30618	31037	420	88	30	1.0	+	UCCUCGGUAGUAUAGUGGUAAGUAUCCC	18	22	66	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:2789-3635	Cluster_7818	Pocillopora_meandrina_HIv1___xfSc0000968	2789	3635	847	346	115	0.22254335260115607	.	AUCUUUCCGAGGCUCUGAGUGGG	52	5	163	11	22	95	50	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:7144-7575	Cluster_7819	Pocillopora_meandrina_HIv1___xfSc0000968	7144	7575	432	316	102	0.9082278481012658	+	UACGUGUAGAAAGCCUUCUCUGACAUC	29	3	288	0	1	14	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:7795-8212	Cluster_7820	Pocillopora_meandrina_HIv1___xfSc0000968	7795	8212	418	127	64	0.984251968503937	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	26	2	124	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:8885-9439	Cluster_7821	Pocillopora_meandrina_HIv1___xfSc0000968	8885	9439	555	578	277	0.8858131487889274	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	52	5	547	2	10	3	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:12503-12931	Cluster_7822	Pocillopora_meandrina_HIv1___xfSc0000968	12503	12931	429	663	190	0.9849170437405732	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	163	2	648	0	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:13281-13693	Cluster_7823	Pocillopora_meandrina_HIv1___xfSc0000968	13281	13693	413	163	107	0.8895705521472392	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	18	2	148	3	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:14987-15421	Cluster_7824	Pocillopora_meandrina_HIv1___xfSc0000968	14987	15421	435	204	77	0.9411764705882353	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	37	1	190	1	2	8	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:20544-20975	Cluster_7825	Pocillopora_meandrina_HIv1___xfSc0000968	20544	20975	432	387	145	0.9121447028423773	+	UGUUUUGGUGUGUUCAAGUAUCUUUGA	35	4	371	1	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:31116-31526	Cluster_7826	Pocillopora_meandrina_HIv1___xfSc0000968	31116	31526	411	112	55	0.9821428571428571	+	UAGUCGACUUUGUGCAACCCGAGUAA	19	2	103	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:14537-14996	Cluster_7827	Pocillopora_meandrina_HIv1___xfSc0000974	14537	14996	460	280	78	0.014285714285714285	-	UGGGCCAUGGUGGAUAGUUGAUAUUCUUC	61	3	266	0	2	6	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:16563-16963	Cluster_7828	Pocillopora_meandrina_HIv1___xfSc0000974	16563	16963	401	78	38	1.0	+	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	17	0	78	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:17063-17815	Cluster_7829	Pocillopora_meandrina_HIv1___xfSc0000974	17063	17815	753	629	272	0.9984101748807631	+	UGCUGUACUCGACGCCAACGUUUCUUGG	26	7	612	1	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:18214-18643	Cluster_7830	Pocillopora_meandrina_HIv1___xfSc0000974	18214	18643	430	362	103	0.9972375690607734	+	UUGGACUGUGCAGCCUUAAUCAGGAACAAC	141	6	346	4	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:18734-19444	Cluster_7831	Pocillopora_meandrina_HIv1___xfSc0000974	18734	19444	711	359	160	0.9637883008356546	+	UGUGUAACUCUACUGUCUUGACAUGACCA	48	17	338	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000975:5701-6132	Cluster_7832	Pocillopora_meandrina_HIv1___xfSc0000975	5701	6132	432	3188	117	0.0006273525721455458	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2250	9	3171	1	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001011:6233-6661	Cluster_7833	Pocillopora_meandrina_HIv1___xfSc0001011	6233	6661	429	355	36	1.0	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	271	0	350	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:14603-15030	Cluster_7834	Pocillopora_meandrina_HIv1___xfSc0001179	14603	15030	428	153	32	0.0196078431372549	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	48	0	151	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:15670-16097	Cluster_7835	Pocillopora_meandrina_HIv1___xfSc0001179	15670	16097	428	353	163	0.12464589235127478	-	UGCGAUUUCGUUCCUCGUCCUUGAUGAUG	24	6	316	1	1	7	22	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001237:1732-2147	Cluster_7836	Pocillopora_meandrina_HIv1___xfSc0001237	1732	2147	416	231	14	1.0	+	GCUGCCGGUCGUUGA	88	231	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001276:11651-12113	Cluster_7837	Pocillopora_meandrina_HIv1___xpSc0001276	11651	12113	463	2585	78	0.035589941972920695	-	UGAUUUGUUGCUGCCCUCUUGCUGC	1123	13	2536	3	1	7	25	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001280:16194-17090	Cluster_7838	Pocillopora_meandrina_HIv1___xpSc0001280	16194	17090	897	1487	221	0.9616677874915938	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	190	13	1442	8	3	7	14	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001281:28695-29155	Cluster_7839	Pocillopora_meandrina_HIv1___xpSc0001281	28695	29155	461	21690	647	0.9920239741816506	+	UGAAUGCUGGUAUCUUGAUAGUAGAACA	14041	37	21454	12	44	103	40	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001344:2542-3535	Cluster_7840	Pocillopora_meandrina_HIv1___xpSc0001344	2542	3535	994	12489	812	0.012250780687004564	-	UUUGUAGGCUCUAACAGUACAUUGUU	4321	168	12099	27	29	57	109	N	N	NA