Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/merged_alignments.bam Location: Pocillopora_meandrina_HIv1___Sc0000017:5050908-5051000 minus Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/strucVis/Cluster_5010.ps Locus Name: Cluster_5010 AGGAGAAGUUAGAUGGAAUCAACUGCUGAGAUUCUAUGGAUUUAAUUUAAAUCCAUAGAACUUCUGCAUUUGAUUCCAAAUAACUCUAACCAU .(((((.((((..(((((((((.(((.(((.(((((((((((((...))))))))))))).))).))).)))))))))..)))))))..)).. (-40.60) AGGAGAAGUUAGAUGGAAUC......................................................................... len:20 al:1 .................AUCAACUGCUGAGAUUCUAUGGAUU................................................... len:25 al:2 ..................UCAACUGCUGAGAUUCUAU........................................................ len:19 al:1 ..................UCAACUGCUGAGAUUCUAUGGAUUU.................................................. len:25 al:5 ..................UCAACUaCUGAGAUUCUAUGGAUUU.................................................. len:25 al:1 ..................UCAACUGCUGAGAUUCUAUGGAUUc.................................................. len:25 al:1 ..................UCAACUGCUGAGAUUCUAUG....................................................... len:20 al:1 ..................aCAACUGCUGAGAUUCUAUGG...................................................... len:21 al:2 ...................CAACUGCUGAGAUcCUAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCgGAGAUUCUAUGGAUU................................................... len:23 al:1 ...................CAACUGCUGAGAUUCUAUGGAgU................................................... len:23 al:1 ...................CAACUGCUGAGAUUCUAUGGAUUUu................................................. len:25 al:3 ...................CAACUGCUGAGAUUCUAUG....................................................... len:19 al:1 ...................CAACUGCgGAGAUUCUAUGGAU.................................................... len:22 al:1 ...................CAACUGCUGAGAUUCUAUGGAUaU.................................................. len:24 al:7 ...................CAACUGCUGAGAUUCUAUGGAcUU.................................................. len:24 al:1 ...................CgACUGCUGAGAUUCUAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAUGGAUUc.................................................. len:24 al:15 ...................CAACUGCUGAGAUUCUAUGGgUU................................................... len:23 al:2 ...................CAACUGCgGAGAUUCUAUGGAUUU.................................................. len:24 al:3 ...................CAACUGCUGAGAUUCUAUGGAUc................................................... len:23 al:1 ...................CAACUGCUGgGAUUCUAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAUGG...................................................... len:20 al:4 ...................CAACUGCUGAGAUUCUAUGGAU.................................................... len:22 al:1 ...................CAACUGCaGAGAUUCUAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAUGGAUUUc................................................. len:25 al:1 ...................CAACUGCUGAGAUUCUAUGGAaUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUAgG....................................................... len:19 al:2 ...................CAACUGCUGAGAUUCUAUGa...................................................... len:20 al:3 ...................CAACUGCUGAGAUUCUAUGGAUgU.................................................. len:24 al:6 ...................CAACUGCUGAGAUUCUAUa....................................................... len:19 al:1 ...................CAACUGCUGAGAUUCUAUGGAUUa.................................................. len:24 al:5 ...................CAACUGCUGAGAUUCUAUGGAUU................................................... len:23 al:18 ...................CAACUGCUGAGAUUCUAUGGAUUUA................................................. len:25 al:1 ...................CAACUGCUGAGAUUCUAUGGAUUU.................................................. len:24 al:98 ...................CAACUGCUGAGAUUCcAUGGAUUU.................................................. len:24 al:1 ...................CAACUGCUGAGAUUCUgUGGAUUUA................................................. len:25 al:1 ....................AcCUGCUGAGAUUCUAUGGAUUUAA................................................ len:25 al:1 ....................AACUGCUGAGAcUCUAUGGAU.................................................... len:21 al:1 ....................AcCUGCUGAGAUUCUAU........................................................ len:17 al:1 ....................AACUGCUGAGgUUCUAU........................................................ len:17 al:3 ....................AACUGCUGAGAUUCcAUGGAUU................................................... len:22 al:11 ....................AAaUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:5 ....................AACUGCUGAGAUUCUAgGGAUUU.................................................. len:23 al:5 ....................AACUGuUGAGAUUCUAUGG...................................................... len:19 al:2 ....................gACUGCUGAGAUUCUAU........................................................ len:17 al:6 ....................AACUGCUGAGAcUCUAUGGAUUU.................................................. len:23 al:113 ....................AACUGCUGAGAUUuUAUG....................................................... len:18 al:1 ....................AACUGCUGuGAUUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAaUCUAUGGAUU................................................... len:22 al:1 ....................AACUGCUGAGAUUCUAUGaA..................................................... len:20 al:2 ....................AACUGCUGAGAUUCUgU........................................................ len:17 al:12 ....................AACUGCUGAGAUUCUAUGGAgU................................................... len:22 al:135 ....................AgCUGCUGAGAUUCUAUGG...................................................... len:19 al:14 ....................AACUGCUGAGAUUCUAUGGAUUUAAc............................................... len:26 al:4 ....................AACaGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:19 ....................cACUGCUGAGAUUCUA......................................................... len:16 al:1 ....................AACUcCUGAGAUUCUAUGGAUUU.................................................. len:23 al:1 ....................AACUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:45976 ....................AACUGCUGAGAUUCc.......................................................... len:15 al:2 ....................AACUGCUGAGAgUCUAU........................................................ len:17 al:3 ....................AACUGCUGAGAUUuUAUGGAUU................................................... len:22 al:8 ....................AACUGCUGAGcUUCUAUGGAUUU.................................................. len:23 al:10 ....................AACUGCUGAGAUUCUAUcG...................................................... len:19 al:8 ....................AACUGCUGAGAUUCgAUGGAUU................................................... len:22 al:2 ....................AAuUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:42 ....................AACUGCUGAGAUUCUAUGGAUUUAuU............................................... len:26 al:17 ....................AcCUGCUGAGAUUCUAUGGAUU................................................... len:22 al:15 ....................AACUGCUGAGAUUCUAUGa...................................................... len:19 al:922 ....................cACUGCUGAGAUUCUAUG....................................................... len:18 al:2 ....................AACUGCUcAGAUUCUAUGGAUUU.................................................. len:23 al:3 ....................AACUGCUGAGAUUCUAUGGAUc................................................... len:22 al:1421 ....................AACUuCUGAGAUUCUAUGGAUU................................................... len:22 al:7 ....................AgCUGCUGAGAUUCUAU........................................................ len:17 al:4 ....................AACUGCUGAGAUUCgAUGGAUUU.................................................. len:23 al:5 ....................AACUGaUGAGAUUCUAUGGAUUU.................................................. len:23 al:6 ....................AACUaCUGAGAUUCUAU........................................................ len:17 al:2 ....................AACUGCUGAGAUUCUAUGGAg.................................................... len:21 al:41 ....................AACaGCUGAGAUUCUAU........................................................ len:17 al:3 ....................AACUGCUGAGAUUCUgUGGAU.................................................... len:21 al:2 ....................AACUGCUGAGAUUCUAUGGAUgU.................................................. len:23 al:795 ....................AACUGCUGAGAUUCUAUGGAgUU.................................................. len:23 al:32 ....................AACUGCUGAGAUUCUcU........................................................ len:17 al:1 ....................AgCUGCUGAGAUUCUAUGGA..................................................... len:20 al:1 ....................AACUGCgGAGAUUCUAUGGAUU................................................... len:22 al:783 ....................AACUGCUGAaAUUCUAU........................................................ len:17 al:1 ....................AACUGCUGAGAUUCUAUGGAaUU.................................................. len:23 al:13 ....................AACUGCUGAGAUUCUAUGGg..................................................... len:20 al:22 ....................AACUGCUuAGAUUCUAUGGAUUU.................................................. len:23 al:9 ....................AACUGCUGAGAUUCUAUGGAUUUuAU............................................... len:26 al:3 ....................AACaGCUGAGAUUCUAUGG...................................................... len:19 al:2 ....................AcCUGCUGAGAUUCUAUGG...................................................... len:19 al:3 ....................AACUGCUGAGcUUCUAUGGAUU................................................... len:22 al:2 ....................AACUGCUGAaAUUCUAUGGAUUU.................................................. len:23 al:11 ....................AACUGCcGAGAUUCUAUGGAU.................................................... len:21 al:3 ....................AACUGCUGAGAUUCa.......................................................... len:15 al:6 ....................AACUGCUGAGAUUCUAa........................................................ len:17 al:12 ....................cACUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:487 ....................AACUGCUGAGgUUCUAUGGAUU................................................... len:22 al:30 ....................AACUGCUGAGAUUCUAUa....................................................... len:18 al:29 ....................AuCUGCUGAGAUUCUAUGGAUU................................................... len:22 al:4 ....................AACUGCcGAGAUUCUAUGGAUU................................................... len:22 al:22 ....................uACUGCUGAGAUUCUAUG....................................................... len:18 al:1 ....................AACUGCcGAGAUUCUAUGGAUUU.................................................. len:23 al:121 ....................AACUGCUGAGAUUaUAUGGAUU................................................... len:22 al:3 ....................uACUGCUGAGAUUCUAUGGAU.................................................... len:21 al:2 ....................gACUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:283 ....................AACUGCUGAGAUUCUAgGGA..................................................... len:20 al:3 ....................AACcGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:4 ....................AACUGCUGAGAUUCUAg........................................................ len:17 al:20 ....................AACUGCUGAaAUUCUAUGGAUU................................................... len:22 al:4 ....................AACUGCUGAGAUUCUAUuG...................................................... len:19 al:2 ....................AACUGCUGAGAcUCUAUGGAUUUA................................................. len:24 al:1 ....................AACUGCUuAGAUUCUAUGGAUUUA................................................. len:24 al:1 ....................AcCUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:164 ....................AACUGCUGAGgUUCUAUGGAUUUA................................................. len:24 al:5 ....................AACUGCUGAGAUUCUAUaG...................................................... len:19 al:25 ....................uACUGCUGAGAUUCUAUGG...................................................... len:19 al:7 ....................AACUGCUGAGAUUCcAUGG...................................................... len:19 al:3 ....................AACUGCUGAGAUUCUAUGGAUUUu................................................. len:24 al:725 ....................cACUGCUGAGAUUCUAUGGAU.................................................... len:21 al:2 ....................AACcGCUGAGAUUCUAUG....................................................... len:18 al:1 ....................AACUGCUGAGAUUCUAUGGAaU................................................... len:22 al:57 ....................AACUGCUGuGAUUCUAUG....................................................... len:18 al:1 ....................gACUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:5 ....................AACUGCUGAGAUUCg.......................................................... len:15 al:1 ....................AACUGCUGgGAUUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUcCUAUGGAUU................................................... len:22 al:17 ....................AACUGCUGAGAUUCUAU........................................................ len:17 al:855 ....................AACUGCUGAGAUUCUAUGGAUg................................................... len:22 al:132 ....................AACUGCcGAGAUUCUAUG....................................................... len:18 al:1 ....................AACUGCUGAGAUgCUAU........................................................ len:17 al:1 ....................AACUGCUGAGAUUCUAUGcA..................................................... len:20 al:1 ....................AACUGCUGgGAUUCUA......................................................... len:16 al:1 ....................AACUGCUGAGAUUuUAUGGAUUUAA................................................ len:25 al:1 ....................AACUGCUGAGAUUCUAUGGAUUg.................................................. len:23 al:627 ....................gACUGCUGAGAUUCUAUGG...................................................... len:19 al:8 ....................AACUGCUGAGAUUCUAUGGgUUUA................................................. len:24 al:6 ....................AACUGCUGAGAUUCUAUGuAUU................................................... len:22 al:1 ....................AACUGCUGAGAUUuUAUGGAUUU.................................................. len:23 al:85 ....................AACUGCUGuGAUUCUAUGG...................................................... len:19 al:1 ....................AACUGCUGAGAUUCUAUGGAgUUA................................................. len:24 al:1 ....................AACUGCUGAGAUUCUAUGGAUUUAAU............................................... len:26 al:24 ....................AACUGCUGAGAgUCUAUGGAUUU.................................................. len:23 al:4 ....................AACUGCgGAGAUUCUAUGG...................................................... len:19 al:92 ....................AACUGCUGAGAUUCUAUGGAU.................................................... len:21 al:480 ....................AuCUGCUGAGAUUCUAUGG...................................................... len:19 al:2 ....................AACUGCUaAGAUUCUAUGGAUUU.................................................. len:23 al:24 ....................AACUGCgGAGAUUCUAU........................................................ len:17 al:2 ....................AACcGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:116 ....................AACUGaUGAGAUUCUAU........................................................ len:17 al:1 ....................AACUGCUGAGAUUuUAUGG...................................................... len:19 al:6 ....................AACUGCUGAGAUUCaAUGGAUUU.................................................. len:23 al:14 ....................AAuUGCUGAGAUUCUAU........................................................ len:17 al:1 ....................AACUGCUGAGAUUCUAUGcAUU................................................... len:22 al:1 ....................AACUGCUGgGAUUCUAUGG...................................................... len:19 al:8 ....................AACUGCUGAGAUUuUAUGGAUUUA................................................. len:24 al:36 ....................AACUGCUGAGAUUCUAUaGAUUU.................................................. len:23 al:59 ....................AACUGCUaAGAUUCUAUGGAUU................................................... len:22 al:1 ....................AACUGCUGAGAUUCcAUGGAUUUA................................................. len:24 al:2 ....................AACUGCUGAGuUUCUAUGGAUUU.................................................. len:23 al:2 ....................AACUGCUGAuAUUCUAUGGAUUU.................................................. len:23 al:2 ....................AACUGCgGAGAUUCUAUGGAU.................................................... len:21 al:66 ....................AACUGuUGAGAUUCUAU........................................................ len:17 al:2 ....................AgCUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:6 ....................AACcGCUGAGAUUCU.......................................................... len:15 al:1 ....................AACUGCUGAGAUUCUAcGGAUU................................................... len:22 al:14 ....................AACUGCUGAGAUUCUAUGGAUcU.................................................. len:23 al:167 ....................AACUGCUGAGAUUCUAUGc...................................................... len:19 al:34 ....................AACUGCUGAGAUUCUAUGaAUUU.................................................. len:23 al:24 ....................AACUGuUGAGAUUCUAUGGAUUU.................................................. len:23 al:42 ....................AACUGCUGAGAUUCUAUGGAUUUAAUU.............................................. len:27 al:6 ....................AAuUGCUGAGAUUCUAUGGAUU................................................... len:22 al:2 ....................AACUGCUGAGAUUCUAcG....................................................... len:18 al:9 ....................AACUGCUGAGAUUCUAUuGAUUU.................................................. len:23 al:11 ....................AACUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:924 ....................AACUGCUGAGAUUCUAUGGAUaUA................................................. len:24 al:1 ....................AACaGCUGAGAUUCUAUGGAU.................................................... len:21 al:1 ....................AuCUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:38 ....................AACUGCUGAGAUUCUAUGuAUUU.................................................. len:23 al:10 ....................AACUGCUGAGAUUCUgUGGAUUUA................................................. len:24 al:5 ....................AACUGCUGAGAaUCUAUGGAUUU.................................................. len:23 al:10 ....................AACUGCUGAGcUUCUAUGG...................................................... len:19 al:1 ....................AACUGCgGAGAUUCUAUGGAUUUAAU............................................... len:26 al:1 ....................AACUGCUGAGAUcCUAUG....................................................... len:18 al:1 ....................AACUGCUGAGAcUCUAUGGAUU................................................... len:22 al:18 ....................AACUGCUGAGAUUCUAUGGAUUcA................................................. len:24 al:8 ....................AACUGCUGAGAUUCUcUGG...................................................... len:19 al:4 ....................AgCUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:235 ....................AAgUGCUGAGAUUCUAUGGAUU................................................... len:22 al:1 ....................AACUaCUGAGAUUCUAUGG...................................................... len:19 al:2 ....................AACUGCUGAGAUUCUAUaGAU.................................................... len:21 al:2 ....................AACUGCUGAGAUUCUgUGG...................................................... len:19 al:7 ....................AACUGCUGAGAUUCUAUGGAUUa.................................................. len:23 al:2004 ....................AACUGCUGAaAUUCUAUGG...................................................... len:19 al:6 ....................uACUGCUGAGAUUCUAUGGA..................................................... len:20 al:1 ....................AACUGCUGgGAUUCUAU........................................................ len:17 al:7 ....................AACUuCUGAGAUUCUAU........................................................ len:17 al:2 ....................gACUGCUGAGAUUCUAUGGAU.................................................... len:21 al:2 ....................AACUGCUGAGAUaCUAUGG...................................................... len:19 al:1 ....................AACUGCUGAGgUUCUAUGGAU.................................................... len:21 al:2 ....................AACUGCUGAGAUUCUA......................................................... len:16 al:23 ....................AACUGCUGAGAgUCUAUGGAUU................................................... len:22 al:5 ....................AACUGCUGAGAUUaUAUGGAUUU.................................................. len:23 al:5 ....................AACUGCUGAGAUUCUAaGGAUUU.................................................. len:23 al:13 ....................AACUGCgGAGAUUCUAUG....................................................... len:18 al:16 ....................AACUaCUGAGAUUCUAUGGAUUU.................................................. len:23 al:39 ....................AcCUGCUGAGAUUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUUCUAUG....................................................... len:18 al:142 ....................AACUGCUGAGAUUCaAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUUCUAUGGcUUU.................................................. len:23 al:4 ....................AuCUGCUGAGAUUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCcGAGAUUCUAU........................................................ len:17 al:3 ....................cACUGCUGAGAUUCUAUGGAUU................................................... len:22 al:77 ....................AACcGCUGAGAUUCUAU........................................................ len:17 al:2 ....................AACUGCUGAGAUUCUAUGGA..................................................... len:20 al:206 ....................uACUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:3 ....................AACUGCUGAGAUUCUAUGGAUUUuA................................................ len:25 al:15 ....................AACUGCUGAGAcUCUAU........................................................ len:17 al:1 ....................AACUGCUGAGAUUCUAUGGAc.................................................... len:21 al:96 ....................AACUGCUGAGAUUaUAUGG...................................................... len:19 al:1 ....................AACUGCUGAGAUUCUcUGGAUUU.................................................. len:23 al:5 ....................AACUGCUGAGAUUCUAUGGAUa................................................... len:22 al:387 ....................AACUGCUGAGAUUuUAUGGA..................................................... len:20 al:1 ....................AACUGCUGAGAUUCUAUaGAUU................................................... len:22 al:3 ....................cACUGCUGAGAUUCUAUGGA..................................................... len:20 al:2 ....................AACaGCUGAGAUUCUAUGGAUU................................................... len:22 al:4 ....................AACUGCUGAGAUcCUAU........................................................ len:17 al:3 ....................AACUGCUGAGAUUCUAcGGAUUUA................................................. len:24 al:4 ....................AACgGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:11 ....................AACUGCUGAGAUUCUgUGGAUU................................................... len:22 al:19 ....................AgCUGCUGAGAUUCUAUGGAUU................................................... len:22 al:32 ....................AACcGCUGAGAUUCUAUGG...................................................... len:19 al:5 ....................AACUGCUGAGAUUCaAUGGAUU................................................... len:22 al:2 ....................AAgUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:3 ....................AACUGCUGAGAUUCUAUGu...................................................... len:19 al:111 ....................AACUGCUGAGAUUCUAUGGAUU................................................... len:22 al:6713 ....................AACUGCUGAGAUUCUAUGGAUUUAAaU.............................................. len:27 al:2 ....................AACUGCUGAGAUUCUAgGGAUU................................................... len:22 al:1 ....................AACUGCUGcGAUUCUAUGGAUU................................................... len:22 al:2 ....................AACUGCUGAGuUUCUAUGG...................................................... len:19 al:1 ....................AACaGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:1 ....................AACUGCUGAGAUUCUAUGaAUU................................................... len:22 al:5 ....................AACUGCUGAGAUUCUAUGGAUUUgAU............................................... len:26 al:1 ....................AACUGCcGAGAUUCUAUGG...................................................... len:19 al:5 ....................AACUGgUGAGAUUCUAUGGAUU................................................... len:22 al:1 ....................AACUGCUGAGAUUCUAUGcAUUU.................................................. len:23 al:5 ....................AACcGCUGAGAUUCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGAGAUUCUAUGGgUUU.................................................. len:23 al:141 ....................AACUGCUGAGAUUCUAc........................................................ len:17 al:148 ....................AACUGCUGAGAUUCU.......................................................... len:15 al:15 ....................AACUGCUGAGAUUCUAgGG...................................................... len:19 al:141 ....................AACUGCUGAGAUUCUAUGGAUUUAu................................................ len:25 al:82 ....................AACUGCUGcGAUUCUAUGGAUUU.................................................. len:23 al:11 ....................AACUGCaGAGAUUCUAUGG...................................................... len:19 al:1 ....................AACUuCUGAGAUUCUAUGGAUUUAAU............................................... len:26 al:1 ....................AACgGCUGAGAUUCUAUGGAUU................................................... len:22 al:3 ....................AACUGCUGAGAUUCUAcGGAU.................................................... len:21 al:4 ....................AACUGCUGAGAUUCUAUGGAUUUAg................................................ len:25 al:5 ....................uACUGCUGAGAUUCUAUGGAUU................................................... len:22 al:14 ....................AACUGCUGAGAUUCUAUGGAUUaA................................................. len:24 al:4 ....................AACUGCaGAGAUUCUAUGGAUU................................................... len:22 al:4 ....................AACUGCUGAGAUUCUAcGGAUUU.................................................. len:23 al:90 ....................cACUGCUGAGAUUCUAUGGAUUUA................................................. len:24 al:9 ....................AACUGCUGAGAUUCUAaGGAUU................................................... len:22 al:1 ....................cACUGCUGAGAUUCUAU........................................................ len:17 al:10 ....................AACUGCUGAGAUUCUAUGGAUUUg................................................. len:24 al:22 ....................AACUGCUGAGAUUCUgUGGA..................................................... len:20 al:1 ....................cACUGCUGAGAUUCUAUGG...................................................... len:19 al:22 ....................AACUaCUGAGAUUCUAUGGAUU................................................... len:22 al:8 ....................AACUGCgGAGAUUCUAUGGAUUU.................................................. len:23 al:507 ....................uACUGCUGAGAUUCUAUGGAUUU.................................................. len:23 al:139 ....................AACUGCUGAGAcUCUAUGG...................................................... len:19 al:8 ....................AACUGCUGgGAUUCUAUGGAUU................................................... len:22 al:18 ....................AACUGCUGAGAUUCUAUGGu..................................................... len:20 al:8 ....................AACcGCUGAGAUUCUAUGGA..................................................... len:20 al:1 ....................AACUGCUGAGAUcCUAUGGAU.................................................... len:21 al:1 ....................AACUGCUGuGAUUCUAUGGAUU................................................... len:22 al:2 ....................AACUGCUGAGAUUCUAUaGAUUUA................................................. len:24 al:1 ....................AACUGCUGAGAUUCUAUGGAUUUAA................................................ len:25 al:16 ....................AgCUGCUGAGAUUCUAUG....................................................... len:18 al:2 ....................AACUGCUGgGAUUCUAUGGAUUUA................................................. len:24 al:6 ....................AACUGCUGAGAUUCUAUGGAUUUAc................................................ len:25 al:20 ....................AACUGCUGAGAUUCUAUGGAUUUc................................................. len:24 al:80 ....................AgCUGCUGAGAUUCUAUGGAU.................................................... len:21 al:4 ....................AACUGCUGAGAUUCUAUGG...................................................... len:19 al:2232 ....................AACUGCUGAGAUUCUAUGGAcU................................................... len:22 al:56 ....................AACUGCUGAGAUUCUAUGGAa.................................................... len:21 al:30 ....................AACUGCUGAGgUUCUAUG....................................................... len:18 al:2 ....................AACUGCUGAGAUUCUAUGGuU.................................................... len:21 al:1 ....................AACUGCUGAGAUUuUAU........................................................ len:17 al:1 ....................AACUGCUGAuAUUCUAUGG...................................................... len:19 al:1 ....................AACUGCUGAGAUUCUAUGGAUUc.................................................. len:23 al:6805 ....................AACUGCUGAGAUgCUAUGGAUUU.................................................. len:23 al:2 ....................AACUGCUGAGAUUCUAUGGAUaU.................................................. len:23 al:370 ....................AACUGCUGuGAUUCUAUGGAUUU.................................................. len:23 al:17 ....................AACUGCUGAGgUUCUAUGG...................................................... len:19 al:6 ....................AACUGCUGAGAUUCcAUGGAUUU.................................................. len:23 al:90 ....................AACUGCUGAGAUUCUAUGGgUU................................................... len:22 al:20 ....................AACUGCgGAGAUUCUAUGGAUUUA................................................. len:24 al:2 ....................AACUGCUGAGAUUCUAUu....................................................... len:18 al:2 ....................AACUGCUGAGAUUCUAUGGgU.................................................... len:21 al:13 ....................uACUGCUGAGAUUCUAU........................................................ len:17 al:4 ....................AACUGCUGgGAUUCUAUGGAUUU.................................................. len:23 al:183 ....................AACUGCUGAuAUUCUAUG....................................................... len:18 al:1 ....................AACUGCUGAGAUUCUAUGGAcUU.................................................. len:23 al:68 ....................AACUGCUGAGAUUCUAUGGuUU................................................... len:22 al:4 ....................AACUuCUGAGAUUCUAUGGAUUU.................................................. len:23 al:108 ....................AACUGCUGAGAUUCUAgG....................................................... len:18 al:49 ....................AACUGCUGAGAUcCUAUGGAUUU.................................................. len:23 al:112 ....................AACUuCUGAGAUUCUAUGG...................................................... len:19 al:3 ....................AACUGCUGAGAUUCUgUGGAUUU.................................................. len:23 al:108 ....................gACUGCUGAGAUUCUAUGGAUU................................................... len:22 al:43 ....................AACcGCUGAGAUUCUAUGGAUU................................................... len:22 al:21 ....................AACUGCUGAGAUUCcAU........................................................ len:17 al:1 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..................................................AUCCAUAGAACUUCUGCAUU....................... len:20 al:108 ..................................................AUCCAUAGAACUUCUGCAUUUGA.................... len:23 al:31005 ..................................................AUCCAUAGAuCUUCUGCAUUUGA.................... len:23 al:2 ..................................................AUCCAUAuAACUUCUGCAUUUGA.................... len:23 al:21 ..................................................AUCCAUAGAACUUCUGCAUgUGA.................... len:23 al:3 ..................................................AUCCAUAGAACUUCcGCAUUUGA.................... len:23 al:129 ..................................................uUCCAUAGAACUUCUGCAUUUG..................... len:22 al:2 ..................................................AUCCAUAGAACUUCUGCAg........................ len:19 al:1 ..................................................cUCCAUAGAACUUCUGCAUUUGAU................... len:24 al:1 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..................................................AUaCAUAGAACUUCUGCAUUUGA.................... len:23 al:15 ..................................................AUCCAUAGAgCUUCUGCAUUUG..................... len:22 al:1 ..................................................AUCCAUAGAACUUCUGuAUUUGA.................... len:23 al:36 ..................................................AUCCAUAGAACUUuUGCAUUUGA.................... len:23 al:21 ..................................................AUCCAUAGAACUUCUGaAUUUGA.................... len:23 al:3 ..................................................AUCCAUAGAACUaCUGCAUUUGA.................... len:23 al:11 ...................................................UCCAUAGAAuUUCUGCAUUUGA.................... len:22 al:11 ...................................................UCCAUAGAACUUCUGCAUUcGA.................... len:22 al:17 ...................................................UCCAUAGAACUUuUGCAUUUGA.................... len:22 al:3 ...................................................UCCAUAGAACUUCUGu.......................... len:16 al:1 ...................................................UCCAUAGAACUUCUGCAUUUGu.................... len:22 al:558 ...................................................UCCAUAGAACUUCUGCAUUc...................... len:20 al:3 ...................................................UgCAUAGAACUUCUGCAUUUGA.................... len:22 al:1 ...................................................UCCAUAGAACUUCUGCAUaUGA.................... len:22 al:4 ...................................................aCCAUAGAACUUCUGCAUUUG..................... len:21 al:2 ...................................................UCCAUAGAACUUCUGCAUUUGAUa.................. len:24 al:1 ...................................................UCCAUAuAACUUCUGCAUUUGA.................... len:22 al:15 ...................................................UaCAUAGAACUUCUGCAUUUG..................... len:21 al:1 ...................................................UCCAUAGAACUaCUGCAUUUGA.................... len:22 al:4 ...................................................UCCAUAGAAaUUCUGCAUUUG..................... len:21 al:1 ...................................................UCCAUAGAACUUCUGCg......................... len:17 al:1 ...................................................UCCAUgGAACUUCUGCAUUUGA.................... len:22 al:17 ...................................................UCCAUAGAACUUCUGCAcUUGAU................... len:23 al:1 ...................................................UCCAUAGAACUUCUGCAUUUG..................... len:21 al:134 ...................................................UCCAUAGAACUUCUaCAUUUGA.................... len:22 al:8 ...................................................UCCAUAGAACUUCUGCAUUUGgU................... len:23 al:1 ...................................................UCCAUAGAACUUaUGCAUUUGA.................... len:22 al:1 ...................................................UCCAUAGAACUUCUuCAUUUGA.................... len:22 al:1 ...................................................UCCAUAGAACUUCUGCAUUcG..................... len:21 al:3 ...................................................UCCAUAGAACUUCUGCAUgUG..................... len:21 al:2 ...................................................UCCAUAGAACUUCaGCAUUUGA.................... len:22 al:6 ...................................................UCCAUAGAACaUCUGCAUUUGA.................... len:22 al:4 ...................................................UCCAUAGAACUUCUGCAUUaGA.................... len:22 al:4 ...................................................UaCAUAGAACUUCUGCAUUUGA.................... len:22 al:14 ...................................................UCCAUAGAACUUCUGCAUUUGAa................... len:23 al:1 ...................................................UCCAUAGAACUUCUGCAgU....................... len:19 al:1 ...................................................UCCAUAGAACUUCUGCAUUU...................... len:20 al:9 ...................................................UCCAUAGgACUUCUGCAUU....................... len:19 al:1 ...................................................UCCAUAGAACUUCUGCAcUUGA.................... len:22 al:19 ...................................................UCCAUAGAACUUCUGCgUUUG..................... len:21 al:1 ...................................................UCCAUAGAACUUCUGC.......................... len:16 al:4 ...................................................UCCAUAGAACUUCUGaAUUUGA.................... len:22 al:5 ...................................................aCCAUAGAACUUCUGCAUUUGA.................... len:22 al:52 ...................................................UCCAUAaAACUUCUGCAUUUGA.................... len:22 al:3 ...................................................UCCAUAGAACUUCUGCAUUgG..................... len:21 al:15 ...................................................UCCAUAGAACUUCUGCAUUUGAUU.................. len:24 al:6 ...................................................UCCAaAGAACUUCUGCAUUUGA.................... len:22 al:5 ...................................................UCCAUAGAACUUCUGCAUUUGAc................... len:23 al:5 ...................................................UCaAUAGAACUUCUGCAUUUGA.................... len:22 al:3 ...................................................UCCAUgGAACUUCUGCAUUUG..................... len:21 al:1 ...................................................UCCAUAGAACUUCUGuAUUUGA.................... len:22 al:5 ...................................................UCCAUAGAACUUCUGCAUU....................... len:19 al:17 ...................................................UCCAUAGAACUUCcGCAUUUGA.................... len:22 al:37 ...................................................UCCAUAGAgCUUCUGCAUUU...................... len:20 al:1 ...................................................UCCAUAGgACUUCUGCAUUUG..................... len:21 al:1 ...................................................UCCAUcGAACUUCUGCAUUUGA.................... len:22 al:1 ...................................................UCCAUAGAAaUUCUGCAUUUGA.................... len:22 al:3 ...................................................UCCAUAGAACUUCcGCAUUUG..................... len:21 al:1 ...................................................UCCAUAGAACUUCUGCAUUUc..................... len:21 al:1 ...................................................UCCAUAGAACUUCUGCAUUUGAU................... len:23 al:40 ...................................................UCCuUAGAACUUCUGCAUUUGA.................... len:22 al:2 ...................................................UCCAUAGAACUUCUGCAc........................ len:18 al:1 ...................................................UCCAUAGAACUUCUGCAUUUuA.................... len:22 al:2 ...................................................UCCAUAGAACUUCUGCAUUUGg.................... len:22 al:190 ...................................................UCCAUAGAACUUCUGCAUUUGAaU.................. len:24 al:1 ...................................................UCCAUuGAACUUCUGCAUUUGA.................... len:22 al:1 ...................................................UCCAUAGAACUUCcGCAUUUGAU................... len:23 al:2 ...................................................UCCAUAGAACUUCUGCgUUUGA.................... len:22 al:18 ...................................................cCCAUAGAACUUCUGCAUUUGA.................... len:22 al:114 ...................................................UuCAUAGAACUUCUGCAUUUGA.................... len:22 al:10 ...................................................UCCAUAGAACUUCUGCAaUUGA.................... len:22 al:2 ...................................................UCCAUAGAACUUCUGCAUc....................... len:19 al:6 ...................................................UCCAUAGAACUUCUGgAUUUGA.................... len:22 al:1 ...................................................UCCgUAGAACUUCUGCAUUUGA.................... len:22 al:32 ...................................................UCCAUAuAACUUCUGCAUUUG..................... len:21 al:1 ...................................................gCCAUAGAACUUCUGCAUUUGA.................... len:22 al:4 ...................................................UCCcUAGAACUUCUGCAUUUGA.................... len:22 al:2 ...................................................UCCAUAGAACUUCUGCAUUUGc.................... len:22 al:47 ...................................................UCuAUAGAACUUCUGCAUUUGA.................... len:22 al:4 ...................................................UCCAUAGAACUUCUGCAUUgGA.................... len:22 al:2 ...................................................UCCAUAGAACcUCUGCAUUUGA.................... len:22 al:24 ...................................................UCCAUAGAcCUUCUGCAUUUGA.................... len:22 al:1 ...................................................UCCAUAGAACUUCUGCAUUUGA.................... len:22 al:8500 ...................................................UCCAUAGAACUUCUGCAcUUG..................... len:21 al:1 ...................................................UCCAUAGAACUUCUGCAUUUa..................... len:21 al:19 ...................................................UCCAUAGAACgUCUGCAUUUGA.................... len:22 al:2 ...................................................UCCAUAGAACUUCUGCAgUUGA.................... len:22 al:3 ...................................................UCCAUAGAgCUUCUGCAUUUGA.................... len:22 al:41 ...................................................UCCAUAGAACUUCUGCAUUUu..................... len:21 al:1 ...................................................UCCAcAGAACUUCUGCAUUUGA.................... len:22 al:15 ...................................................UCCAUAGAACUUCUGCAUUUaA.................... len:22 al:4 ...................................................UCCAUAGAACUUCUGCAUcUGA.................... len:22 al:10 ...................................................UCCAUAGgACUUCUGCAUUUGA.................... len:22 al:31 ...................................................UCCAUAGAACUcCUGCAUUUGA.................... len:22 al:19 ...................................................UCCAUAGAACUUCUGCA......................... len:17 al:2 ....................................................CCAUAGgACUUCUGCAUUUGA.................... len:21 al:1 ....................................................CCAUAGAACUUCUGCAUUUGAc................... len:22 al:3 ....................................................CCAUAGAACUUCUGCAUUUGAUa.................. len:23 al:2 ....................................................CCAUAGAACUUCUGCAUUUGA.................... len:21 al:6 .....................................................CAUAGAACUUCUGCAUUUGAU................... len:21 al:1 .....................................................CAUAGAACUUCUGCAUUUGg.................... len:20 al:3 .....................................................CAUAGAACUUCUGCAUUUGA.................... len:20 al:45 .....................................................CAUAGAACUUCUGCAUUUGu.................... len:20 al:1 .....................................................CAUAGAACUUCcGCAUUUGA.................... len:20 al:2 .....................................................CAUAGAAgUUCUGCA......................... len:15 al:1 ......................................................AUAGAACUUCUGCAUUUGA.................... len:19 al:10 ......................................................cUAGAACUUCUGCAUUUGA.................... len:19 al:2 ......................................................uUAGAACUUCUGCAUUUGA.................... len:19 al:1 ......................................................AUAGAACUUCUGCAUUUGAU................... len:20 al:5 ......................................................AUAGAACUUCUGCAUUUG..................... len:18 al:1 ......................................................AUAGAACUUCUGCAUUUGAUU.................. len:21 al:2 .......................................................UAGAACUUCUGCAUU....................... len:15 al:1 .......................................................UAGAACUUCUGCAUUUGA.................... len:18 al:2 ........................................................AGAACUUCUGCAUUUGA.................... len:17 al:1