Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/merged_alignments.bam Location: Pocillopora_meandrina_HIv1___Sc0000016:7555639-7555733 plus Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/strucVis/Cluster_4875.ps Locus Name: Cluster_4875 GAGAAAUUUUGUCUGGCAUAUGGUGGGCUGUUGGAACUUGUAUUUUUAUGAUAUCAGUCCCACCAGCUCACCAAUAUGCUAGAUGAUAUUAUGCA ....(((.((((((((((((((((((((((.(((.(((.(((((.....))))).))).))).))))))))).))))))))))))).)))..... (-42.80) .AcAAAUUUUGUCUGGCAUAU.......................................................................... len:20 al:3 ..cAAAUUUUGUCUGGCAU............................................................................ len:17 al:2 ..cAAAUUUUGUCUGGCAUAU.......................................................................... len:19 al:1 ....................UGGUGGGCUGUUuGAACUUGUA..................................................... len:22 al:80 ....................UGGUGGGCUGUUuGAACUUGUAUU................................................... len:24 al:1 ....................UGGUGGGCUGUUuGAACUUGUAU.................................................... len:23 al:5 ....................UGGUGGGCUGUUuGAACUUG....................................................... len:20 al:2 ....................UGGUGGGCUGUUuGAA........................................................... len:16 al:2 ....................UGGUGGGCUGUUuGAACUU........................................................ len:19 al:4 ....................UGGUGGGCUGUUuGAACUUGU...................................................... len:21 al:32 .....................GGUGGGCUGUUGGAgCUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUcGGAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAACUUa....................................................... len:19 al:4 .....................GGUGGGCUGUUuGAACUUGUAUUUU................................................. len:25 al:1 .....................GGUGGGCUGUUuGAACUUGUAU.................................................... len:22 al:86 .....................GGUGGGCUGUUGGAcCUUGU...................................................... len:20 al:2 .....................GGUGGGCUGUUGGAACUUGcA..................................................... len:21 al:10 .....................GGUGaGCUGUUGGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAuCUUGUAUUU.................................................. len:24 al:3 .....................GGUGGaCUGUUGGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAACUgGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAAaUUGU...................................................... len:20 al:1 .....................cGUGGGCUGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACU......................................................... len:17 al:6 .....................GGUGGGCUGUUGGAuCUUGUAUU................................................... len:23 al:6 .....................GGUGGGCUGUUGGAuCUU........................................................ len:18 al:25 .....................GGUGGGCUGUUuGAACU......................................................... len:17 al:14 .....................GGUGGGCUGUUGGAuCUUGU...................................................... len:20 al:1185 .....................GGUGGGCUGUUGGAAuUUGUA..................................................... len:21 al:3 .....................GGUGGGCUGUUGGAACg......................................................... len:17 al:1 .....................GGUGGGCUGgUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAuC.......................................................... len:16 al:8 .....................GGUGGGCUGUUuGAACUUGU...................................................... len:20 al:473 .....................GGUGGGCUGUUGGAACUUGUAUU................................................... len:23 al:3 .....................GGUGGGCUGUUGcAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAACUUGUAgU................................................... len:23 al:1 .....................GGUGGGCUGUUGGAACUUGU...................................................... len:20 al:303 .....................GGUGGGCUGUUGuAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAuCUUGUAU.................................................... len:22 al:81 .....................GGUGGGCUGUUGGAcCUUGUA..................................................... len:21 al:3 .....................GGUGGGCUGUUGGAACUUGUAc.................................................... len:22 al:3 .....................GGUGGGCUGUUGGAACUa........................................................ len:18 al:4 .....................GGUGGGCUGUUGGAgCUUGU...................................................... len:20 al:2 .....................GGUGGGCUGcUGGAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUaUUGGAACUUGUA..................................................... len:21 al:1 .....................uGUGGGCUGUUGGAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAACUUGUAU.................................................... len:22 al:26 .....................GGUaGGCUGUUGGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAu........................................................... len:15 al:5 .....................GGUGGGCUGUUGGAACUUcU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACcUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGaAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUuGAACUUGUAUUUUUAUG............................................. len:29 al:1 .....................GGUGGGCUGUaGGAACUUGUAU.................................................... len:22 al:1 .....................GGUGGGCUGUUGGAACUc........................................................ len:18 al:5 .....................GGUGGGCUGUUGGAACUUGUAaUU.................................................. len:24 al:1 .....................GGUGGGCUGUUcGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCcGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUcGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUuGAACUUGUAUU................................................... len:23 al:10 .....................GGUGGGCUGUUGGAACUUGc...................................................... len:20 al:49 .....................GGUGGGCUGUUGGAACUUaU...................................................... len:20 al:3 .....................GGUGGGCUGUUGGAACUUGUg..................................................... len:21 al:29 .....................GGUGGGCUGUUGGgACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAuCUUGUAUUUUUAUGAU........................................... len:31 al:1 .....................GGUGGGCUGUUuGAACUUGUA..................................................... len:21 al:1636 .....................GGUGGGCUGUUuGAACUUGUAUUU.................................................. len:24 al:4 .....................GGUGGGCUGUUGGAACaUGUA..................................................... len:21 al:1 .....................GGUGGGCUGUUGGAACc......................................................... len:17 al:2 .....................GGUGGGCUGUUGGAACUgG....................................................... len:19 al:1 .....................GGUGGGCUGUUGGAACUUuU...................................................... len:20 al:2 .....................uGUGGGCUGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGuCUGUUGGAACUUGUAU.................................................... len:22 al:1 .....................GGUGGGCUGUUGGAACUUGUAUa................................................... len:23 al:3 .....................GGUGGGCUGUUGGAAC.......................................................... len:16 al:1 .....................GGUGGGCUGUUaGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUaGAACUUGU...................................................... len:20 al:2 .....................GGUGGGCUGUUGGAACUUGUu..................................................... len:21 al:8 .....................GGUGGGCUGUUGGAACUUGUAUaU.................................................. len:24 al:7 .....................GGUGGGCUGUUGGAACgU........................................................ len:18 al:1 .....................GGUGGGCUGUUGGAACUUGUAaU................................................... len:23 al:5 .....................GGUGGGCUGUUuGAAC.......................................................... len:16 al:4 .....................GGUGGGCUGUUGGAuCUUG....................................................... len:19 al:24 .....................GGUGGGCUGUUGGAc........................................................... len:15 al:3 .....................GGUGGGCUGUUuGAACUU........................................................ len:18 al:34 .....................GGUGGGCUGUUGGAAuUUGU...................................................... len:20 al:5 .....................GGUGGGCUGUUGGAACUUG....................................................... len:19 al:7 .....................GGUGGGCUGUUGGAuCU......................................................... len:17 al:7 .....................GGUGGGCUGUUGGAACUcGU...................................................... len:20 al:4 .....................GGUGGGCUGUUGGAACUUGUA..................................................... len:21 al:934 .....................GGUGGGCUGUUGGAACUU........................................................ len:18 al:10 .....................GGUGGGCUGUUGGAACUUc....................................................... len:19 al:1 .....................GGUGGGCUGUUcGAACUUGUA..................................................... len:21 al:5 .....................aGUGGGCUGUUGGAACUUGU...................................................... len:20 al:5 .....................aGUGGGCUGUUGGAACUUGUA..................................................... len:21 al:19 .....................GGcGGGCUGUUGGAACUUGUA..................................................... len:21 al:2 .....................GGUGGGCUGUUGGAACUUGg...................................................... len:20 al:23 .....................GGUGGGCUGUUGGAA........................................................... len:15 al:2 .....................GGUGGGCUGUUGGgACUUGUA..................................................... len:21 al:3 .....................GGUGGGCUGUUGGAACUcGUA..................................................... len:21 al:1 .....................GaUGGGCUGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACUUGUAa.................................................... len:22 al:20 .....................GGUGGGCUGUUGGAACUUGa...................................................... len:20 al:15 .....................GGUGGGCUGUUGGAACUUGgA..................................................... len:21 al:2 .....................GGUGGGCUGUUuGAACUUG....................................................... len:19 al:15 .....................aGUGGGCUGUUGGAACU......................................................... len:17 al:1 .....................GGUGGuCUGUUGGAACUUGUA..................................................... len:21 al:1 .....................GGUGGGCgGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAuCUUGUA..................................................... len:21 al:461 .....................GGUGGGuUGUUGGAACUUGU...................................................... len:20 al:1 .....................GGUGGGCUGUUGGAACUUGUAg.................................................... len:22 al:3 ......................GUGGGCUGUUGGAuCUU........................................................ len:17 al:1 ......................GUGGGCUGUUGGAuCUUGUAU.................................................... len:21 al:1 ......................GUGGGCUGUUGGAuCUUGU...................................................... len:19 al:5 ......................GUGGGCUGUUuGAACUUGU...................................................... len:19 al:2 ......................GUGGGCUGUUuGAACUUGUA..................................................... len:20 al:1 ......................GUGGGCUGUUGGAACUUGU...................................................... len:19 al:5 .......................UGGGCUGUUuGAACUUGU...................................................... len:18 al:1 .......................UGGGCUGUUGGAACUUGUAU.................................................... len:20 al:2 .......................UGGGCUGUUGGAACUUGUAUc................................................... len:21 al:1 .......................UGGGCUGUUGGAACUUGU...................................................... len:18 al:1 .......................UGGGCUGUUuGAACUUGUAUU................................................... len:21 al:1 .......................UGGGCUGUUGGAACUUGUA..................................................... len:19 al:1 .......................UGGGCUGUUuGAACUUGUAUUUUUAUGAUA.......................................... len:30 al:1 .......................UGGGCUGUUGGAuCUUGUA..................................................... len:19 al:1 .......................UGGGCUGUUuGAACUUGUA..................................................... len:19 al:1 .......................UGGGCUGUUuGAACUUGUAU.................................................... len:20 al:1 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACCg...................... len:31 al:10 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACCc...................... len:31 al:1 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACa....................... len:30 al:2 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACCA...................... len:31 al:21 ..........................................UUUUUAUGAUAUCAGUCCCACCAGCUCACC....................... len:30 al:1 ...........................................UUUUAUGAUAUCAGUCCCACCAGCUCACCg...................... len:30 al:1 ..............................................UAUGAUAUCAGUCCCACCAGCUCACCA...................... len:27 al:1 ...................................................UAUCAGUCCCACCAGCUCACCA...................... len:22 al:3 ...................................................aAUCAGUCCCACCAGCUCACCA...................... len:22 al:1 ...................................................UAUCAGUCCCACCAGCUC.......................... len:18 al:1 ...................................................UAUCAGUCCCACCAGCUCACC....................... len:21 al:3 ....................................................AUCAGUCCCACCAGCg........................... len:16 al:1 ....................................................cUCAGUCCCACCAGCUCACCA...................... len:21 al:1 ....................................................AUCAGUCCCACCAGCUCACCAgU.................... len:23 al:1 ....................................................AUCAGUCCCACCAGCUCACCAAUc................... len:24 al:2 ....................................................cUCAGUCCCACCAGCUCACCAAU.................... len:23 al:2 ....................................................AUCAGUCCCACCAGCUCACCAAU.................... len:23 al:6 ....................................................AUCAGUCCCACCAGCUCACCA...................... len:21 al:1 ....................................................AUCAGUCCCACCAGCUCACCAAc.................... len:23 al:2 ....................................................AUCAGUCCCACCAGCUCACCAAUu................... len:24 al:10 .....................................................UCAGUCCCACCAGCUCACuA...................... len:20 al:4 .....................................................UCAGcCCCACCAGCUCACCAAU.................... len:22 al:9 .....................................................UCAGUCCCACCAGCUCAu........................ len:18 al:2 .....................................................UCAGUCCCACCAGCUCACu....................... len:19 al:26 .....................................................UCgGUCCCACCAGCUCACCAAU.................... len:22 al:15 .....................................................UCAGUCCCACCAGCg........................... len:15 al:2 .....................................................UCAGUCCCACCAGCUCACCAAg.................... len:22 al:87 .....................................................UCAGUCCCACgAGCUCACCAAUA................... len:23 al:1 .....................................................UCAGUCCCACCAGCUCAa........................ len:18 al:1 .....................................................UCAGUCCCACCgGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCAGCUCgCCA...................... len:20 al:1 .....................................................UCAGUCCCACCAGCUCACCu...................... len:20 al:5 .....................................................UgAGUCCCACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUCACCAg..................... len:21 al:13 .....................................................UCAGUCCCACCAGCcCACCA...................... len:20 al:3 .....................................................UCAGUCCCACCAcCUCACCA...................... len:20 al:8 .....................................................cCAGUCCCACCAGCUC.......................... len:16 al:1 .....................................................UCAGUCCCACCAGCUCACCAAgA................... len:23 al:1 .....................................................UaAGUCCCACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCgGUCCCACCAGCUCACCA...................... len:20 al:2 .....................................................UCAGUgCCACCAGCUCACCAAUA................... len:23 al:1 .....................................................UCAGcCCCACCAGCUCACCA...................... len:20 al:3 .....................................................UCAGcCCCACCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCuCACCAGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCACuAGCUCACCAAU.................... len:22 al:3 .....................................................aCAGUCCCACCAGCUCACCAA..................... len:21 al:2 .....................................................UCAGUCCCACCAGCUCACgAA..................... len:21 al:1 .....................................................UCAGUCCCuCCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGcCCCACCAGCUC.......................... len:16 al:1 .....................................................UCAGUCCCACCAGCUCAg........................ len:18 al:1 .....................................................UCAaUCCCACCAGCUCACCAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCUCACCAAU.................... len:22 al:3732 .....................................................UCAGUCCCgCCAGCUCACCAAU.................... len:22 al:10 .....................................................UCAGUCCCACCgGCUCACC....................... len:19 al:1 .....................................................UCAGUCCCACCAGCUCACCAAc.................... len:22 al:659 .....................................................UCAGUCCCcCCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUCACCAAaA................... len:23 al:2 .....................................................UCAGUCCCACCAGuUCACCAAU.................... len:22 al:9 .....................................................UuAGUCCCACCAGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCgCCAGCUC.......................... len:16 al:2 .....................................................UCAGUCCCACCAGCUCACCcAU.................... len:22 al:5 .....................................................UCAGUCCCACCAGCU........................... len:15 al:19 .....................................................UCAGUCCCACCAcCUCACCAAU.................... len:22 al:87 .....................................................gCAGUCCCACCAGCUCACC....................... len:19 al:1 .....................................................UCAGUCCCACCAGCUCACCAuUA................... len:23 al:3 .....................................................UCAGUCCCACCAGCUCACCgAU.................... len:22 al:6 .....................................................UCAGUCCCACCAGCUCACgA...................... len:20 al:1 .....................................................UCAGUCCCACCAGCUCACCAAUuU.................. len:24 al:33 .....................................................UCAGUCCCACCuGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCACCgGCUCACCAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCUCACCAAa.................... len:22 al:163 .....................................................UCAGUCCCACCAGCUCACCAu..................... len:21 al:16 .....................................................UCAGUCCuACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCcCACCAAU.................... len:22 al:18 .....................................................UCAGUCCCACCAcCUCACC....................... len:19 al:5 .....................................................UCAGUCCCACCuGCUCACCAAU.................... len:22 al:4 .....................................................UCAGUgCCACCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGaCCCACCAGCUCACCAAUA................... len:23 al:1 .....................................................UCcGUCCCACCAGCUCACCAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAaCUCACCAAU.................... len:22 al:20 .....................................................UCAGUCCCACCAGCUCgCCAAU.................... len:22 al:14 .....................................................aCAGUCCCACCAGCUCACC....................... len:19 al:2 .....................................................UCAGUgCCACCAGCUCACCAAU.................... len:22 al:3 .....................................................UCcGUCCCACCAGCUCACC....................... len:19 al:4 .....................................................UCAuUCCCACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUCACCAA..................... len:21 al:330 .....................................................UCAGUCCCACCAGCUCgCCAAUA................... len:23 al:1 .....................................................UCAGUCCCgCCAGCUCACCA...................... len:20 al:1 .....................................................UCAGcCCCACCAGCUCACC....................... len:19 al:1 .....................................................UCAGUCCCACCAGCUCACCAgU.................... len:22 al:126 .....................................................UCAGUCCCACCAGCUCA......................... len:17 al:17 .....................................................UCAGUCCCAuCAGCUCACCAAU.................... len:22 al:4 .....................................................UCAGUCCCACCAGCUCACCgAUA................... len:23 al:1 .....................................................UCgGUCCCACCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCAcCUCACCAA..................... len:21 al:7 .....................................................UCAGUCCCACCAGCUaACCAAU.................... len:22 al:3 .....................................................UCAGUCCCACCAGCUCAC........................ len:18 al:9 .....................................................UCAGUCCCACCAGCUCAaCAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCUCACuAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAaCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCAGCUCACgAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCcCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCAGCaCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCaCACCA...................... len:20 al:2 .....................................................UCAGUCCCACCAaCUCACCAAUA................... len:23 al:1 .....................................................UCAuUCCCACCAGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCACCAGCUCACCAcU.................... len:22 al:40 .....................................................UCAGUCCCACCgGCUCACCA...................... len:20 al:2 .....................................................UCAGUCCCACCAGCUCACCgA..................... len:21 al:2 .....................................................UCAGUCCCACCAGCUCACCAAUu................... len:23 al:2338 .....................................................UCAGUCCCACCAGCUCACCAAUc................... len:23 al:390 .....................................................UCAGUCCCgCCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCAGCUCACCAcUA................... len:23 al:1 .....................................................UCAGaCCCACCAGCUCACCAAU.................... len:22 al:5 .....................................................UCAGUCCuACCAGCUCACC....................... len:19 al:1 .....................................................UCAGUCCCACCAGCUCACCAAcA................... len:23 al:2 .....................................................cCAGUCCCACCAGCUCACCAA..................... len:21 al:5 .....................................................UCAGUCCaACCAGCUCACCA...................... len:20 al:3 .....................................................cCAGUCCCACCAGCUCACCAAU.................... len:22 al:41 .....................................................UCAGUCCCACCAGCUCACCAAUA................... len:23 al:167 .....................................................UCAGUCCCACCAGCa........................... len:15 al:8 .....................................................UCAGUCCCACCAcCUCACCAAUA................... len:23 al:8 .....................................................UCAGUCCCACCAGCUCACg....................... len:19 al:4 .....................................................UgAGUCCCACCAGCUCACC....................... len:19 al:1 .....................................................UCAGUCCCACCAGCUCACCAAUg................... len:23 al:24 .....................................................UCAGcCCCACCAGCU........................... len:15 al:1 .....................................................UCAGUCCCACCAGuUCACCA...................... len:20 al:1 .....................................................UCAGUCaCACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUCAgC....................... len:19 al:1 .....................................................UCAGUCCCACCAGCUCACC....................... len:19 al:154 .....................................................UCAGUCCCACCAGCUCg......................... len:17 al:2 .....................................................UCAGUCCCACCAGCUCACCuAU.................... len:22 al:29 .....................................................UCuGUCCCACCAGCUCACCAAU.................... len:22 al:1 .....................................................UuAGUCCCACCAGCUCACCAAU.................... len:22 al:7 .....................................................UCAGUCCaACCAGCUCACCAAU.................... len:22 al:1 .....................................................UCAGUCCCACCAGCUC.......................... len:16 al:16 .....................................................UCAGUCCCACCAGCUCAgCAAU.................... len:22 al:2 .....................................................cCAGUCCCACCAGCUCACCA...................... len:20 al:10 .....................................................UCAGUaCCACCAGCUCACCAAU.................... len:22 al:6 .....................................................UCAGUCCCACCAGCUCACaA...................... len:20 al:5 .....................................................UCAGUaCCACCAGCUCACCAAUA................... len:23 al:5 .....................................................UCAGUCuCACCAGCUCACCAAU.................... len:22 al:3 .....................................................UCAGUCCCACCAGCUCACCAuU.................... len:22 al:5 .....................................................UCAGUCCCACCgGCU........................... len:15 al:1 .....................................................cCAGUCCCACCAGCUCAC........................ len:18 al:1 .....................................................UCAGUCCCACCAGCUuACCAAU.................... len:22 al:4 .....................................................UCAGUaCCACCAGCUCACCA...................... len:20 al:1 .....................................................UCAGUCCCACCAGuUCACCAAUA................... len:23 al:1 .....................................................UCAGUCCuACCAGCUCACCAA..................... len:21 al:1 .....................................................UCAGUCCCACCAGCUCACCc...................... len:20 al:4 .....................................................UCAGUCCCACCAGCUCACa....................... len:19 al:45 .....................................................UCAGUCCCACCAGCUCu......................... len:17 al:1 .....................................................UCAGUCCCACCAGCUCAuCAAU.................... len:22 al:6 .....................................................UCAGUCCCACCAGCUCACaAAU.................... len:22 al:5 .....................................................aCAGUCCCACCAGCUCACCAAU.................... len:22 al:23 .....................................................cCAGUCCCACCAGCUCACC....................... len:19 al:4 .....................................................UCAGUCCCACCAGCUCgCCAA..................... len:21 al:2 .....................................................UCAGUCCCACCAGCUCACCA...................... len:20 al:675 .....................................................UaAGUCCCACCAGCUCACCA...................... len:20 al:1 .....................................................cCAGUCCCACCAGCUCACCAAUA................... len:23 al:2 .....................................................UCAGUCCCACCAGCUCACCAc..................... len:21 al:3 .....................................................UCAGUCCCACCAGCUCACCg...................... len:20 al:90 .....................................................aCAGUCCCACCAGCUCACCA...................... len:20 al:6 .....................................................UCAGUCCCgCCAGCUCACCAAUA................... len:23 al:1 .....................................................UCAGUCCCACCAaCUCACCA...................... len:20 al:3 .....................................................gCAGUCCCACCAGCUCACCAAU.................... len:22 al:2 .....................................................UCAGUCCCACCAGCUCAuCAA..................... len:21 al:1 ......................................................CAGUCCCACCAGCUCACCAAUu................... len:22 al:5 ......................................................CAGUCCCACCAGCUCACCAAU.................... len:21 al:20 ......................................................CAGcCCCACCAGCUCACCAAU.................... len:21 al:1 ......................................................CAGUCCCACCAGCUCACCA...................... len:19 al:1 ......................................................uAGUCCCACCAGCUCACCAAU.................... len:21 al:1 ......................................................CAGUCCCACCAGuUCACCAA..................... len:20 al:1 ......................................................CAGUCCCuCCAGCUCACCAAU.................... len:21 al:1 ......................................................CAGUCCCACCAGCUCACCAA..................... len:20 al:2 ......................................................CAGUCCCACCAGCUCACCAAc.................... len:21 al:11 ......................................................CAGUCCCACCAGCUCACC....................... len:18 al:3 ......................................................CAGUCCCACCAGCUCACCAAUA................... len:22 al:3 .......................................................AGUCCCACCAGCUCACCAAU.................... len:20 al:9 .......................................................AGUCCCACCAGCUCACCAA..................... len:19 al:3 .......................................................AGUCCCACCAGCUCACCAAc.................... len:20 al:4 .......................................................AGUCCCACCAGCUCACCAAUA................... len:21 al:1 .......................................................AGUCCCACCAGCUCACCAAUu................... len:21 al:3 ........................................................GUCCCACCAGCUCACCAAUg................... len:20 al:1 .........................................................UaCCACCAGCUCACCAAUA................... len:19 al:1 .........................................................UCCCACCAGCUCACCAAUg................... len:19 al:1 .........................................................UaCCACCAGCUCACCAAU.................... len:18 al:1 ..........................................................CCCACCAGCUCACCAAU.................... len:17 al:1 ...........................................................CCACCAGCUCACCAAUA................... len:17 al:1