Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000014:9365459-9365552 minus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/strucVis/Cluster_4524.ps
Locus Name: Cluster_4524
GUUGGAUUUCCAGAAGUCAUAGCAUUGUUACUUAUUUGGAAGAUUUGUGUUCCAGAUUUGUAUCAUUGUUAUGACUUAUGGAGCAAAUCCUGAC
...(((((((((.(((((((((((.((.(((..((((((((........))))))))..))).)).))))))))))).))))...))))).... (-38.50)
....................AGCAUUGUUACUUAUUUGGAAG.................................................... len:22 al:4
....................AGCAUUGUUACUUAUUUGGg...................................................... len:20 al:1
....................AGCAUUGUUACUUAUUUGGA...................................................... len:20 al:38
....................AGCAUUGUUACUUAUUUGu....................................................... len:19 al:1
....................AGCAUUGUUACUUAUUUGGAAGg................................................... len:23 al:2
....................AGCAUUGUUACUUAUUUGGc...................................................... len:20 al:3
....................AGCAUUGUUACUUAUUUGGAAGAUUa................................................ len:26 al:1
....................AGCAUUGUUACUUAUUcGGAAGA................................................... len:23 al:1
....................AGCAUUGUUACUUAUUUGGu...................................................... len:20 al:2
....................AGCAUUGUUACUUAUUUGGAAGA................................................... len:23 al:52
....................AaCAUUGUUACUUAUUUGGAAGA................................................... len:23 al:1
....................AGCAUUGUUACUUAUUUGGAAGAUUUGU.............................................. len:28 al:1
.....................GCAUUGUUACUUAUUUGGAAG.................................................... len:21 al:1
.....................GCAUcGUUACUUAUUUGGA...................................................... len:19 al:1
.....................GCAUUGUUACUUAUUUGGAAGu................................................... len:22 al:1
.....................GCAUUGUUACUUAUUUGGAAGA................................................... len:22 al:16
.....................GCAUUGUUACUUAUUUGGg...................................................... len:19 al:2
.....................GCAUUGUUACUUAUUUGGA...................................................... len:19 al:9
.....................GCAUUGUUACUUAUUUGGAgGA................................................... len:22 al:1
................................UAUUUGGAAGAUUUGUGUUCa......................................... len:21 al:2
.................................AUUgGGAAGAUUUGU.............................................. len:15 al:1
...........................................UUUGUGUUCCAGAUUUGUAUCAUUGUUA....................... len:28 al:1
...........................................UUUGUGUUaCAGAUUUGU................................. len:18 al:1
...........................................UUUGUGUUCCAGAUUUGUAUCAUUGUUAc...................... len:29 al:1
...........................................UUUGUGUUCCAGAUUUGUAUCAUUGUUAU...................... len:29 al:7
................................................aUUCCAGAUUUGUAUCAUUGUUAU...................... len:24 al:1
.................................................UUCCAGAgUUGUAUCAUUGUUAU...................... len:23 al:2
.................................................UUuCAGAUUUGUAUCAUUGUUAU...................... len:23 al:4
.................................................UUCCAGAUUaGUAUCAUUGUUAU...................... len:23 al:1
.................................................UcCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:31
.................................................UUCCAGAUUUGUAUC.............................. len:15 al:4
.................................................UUCCAGAUaUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCcUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUuAUUGUUAU...................... len:23 al:27
.................................................UUCCAaAUUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCA............................. len:16 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUu....................... len:22 al:4
.................................................UUCCAGAUUUGUAUCAUUGaU........................ len:21 al:1
.................................................UUCCAGAcUUGUAUCAUUGUUAU...................... len:23 al:20
.................................................UUCCAGAUUUGUAUCAUcGUUAU...................... len:23 al:14
.................................................UUCCAGAUUUGcAUCAUUGUUAU...................... len:23 al:16
.................................................UUCCAGAUUgGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCgUUGUUAU...................... len:23 al:18
.................................................aUCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:22
.................................................UUCCAGAUUUGaAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCuGAUUUGUAUCAUUGUUAU...................... len:23 al:5
.................................................UUCCAGAUUUGUAUCAgUGUUAU...................... len:23 al:4
.................................................UUCCAuAUUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUcUCAUUGUUAU...................... len:23 al:2
.................................................UUCCAGAUUUGUAUCAUUGUcA....................... len:22 al:2
.................................................UUCCAGAUgUGUAUCAUUGUUAU...................... len:23 al:4
.................................................UUCCAGAaUUGUAUCAUUGUUAU...................... len:23 al:2
.................................................gUCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUAUa..................... len:24 al:94
.................................................cUCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:93
.................................................UUCCAGAUUUGUgUCAUUGUUAU...................... len:23 al:15
.................................................UUCCAGAUUcGUAUCAUUGUUAU...................... len:23 al:21
.................................................UUCCAGAUUUGUAUCAUUGcU........................ len:21 al:1
.................................................UUaCAGAUUUGUAUCAUUGUUAU...................... len:23 al:6
.................................................UUCCAGAUUUGUAUCAUUGUUc....................... len:22 al:3
.................................................UUCCAGAUUUGUAUCAUUGUUAUG..................... len:24 al:1
.................................................UUCCAGAUUUcUAUCAUUGUUAU...................... len:23 al:2
.................................................UUCCAGAUUUGUAUCAUUGUg........................ len:21 al:3
.................................................UUCCAGAUUUGUAUCAUgGUUAU...................... len:23 al:7
.................................................UUCCAGgUUUGUAUCAUUGUUAU...................... len:23 al:17
.................................................UUCCAGAUUUGUAUCAUUGUUAUc..................... len:24 al:52
.................................................UUCCAGAUUUGUAUCAUUGcUAU...................... len:23 al:95
.................................................UUCCAGAUUUGUAUCAUUGUU........................ len:21 al:94
.................................................UUCCAGAUUUGUAUCAUUGUUAUuA.................... len:25 al:2
.................................................UUCCAGAUUUGUuUCAUUGUUAU...................... len:23 al:1
.................................................UUCCgGAUUUGUAUCAUUGUUAU...................... len:23 al:29
.................................................UUCCAGAUUUGUAUCAUU........................... len:18 al:1
.................................................UUCCAGAUUUGUAUCAUUGc......................... len:20 al:5
.................................................UUCCAGAUUUGUAUCAUUGUUuU...................... len:23 al:11
.................................................UUCCAGAUUUGUAUaAUUGUUAU...................... len:23 al:3
.................................................UUCCAGAUUUGUAUCAUUuUUAU...................... len:23 al:2
.................................................UUCCAGAUUUaUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUAg...................... len:23 al:146
.................................................UUCCAGAUUUGUAUCAUUGUUAUu..................... len:24 al:245
.................................................UUCCAGAUUUGUAUCAUUGg......................... len:20 al:1
.................................................UUCaAGAUUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUA....................... len:22 al:27
.................................................UUCCAGAUUUGUAUCAUUGUUAUGu.................... len:25 al:1
.................................................UUCCAGAUUUGUAaCAUUGUUAU...................... len:23 al:5
.................................................UaCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:8
.................................................UUCCAGAUUUGUAUCAcUGUUAU...................... len:23 al:14
.................................................UUCCAGAUUUGUAUCAUUGUgAU...................... len:23 al:1
.................................................UUCgAGAUUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAcCAUUGUUAU...................... len:23 al:23
.................................................UUCCAGAUUUGUAUCAUUGU......................... len:20 al:12
.................................................UUCCAGAUUUGUAUCAUUGUUAgG..................... len:24 al:2
.................................................UUCCAGAUUUGUAUCAc............................ len:17 al:1
.................................................UUCCAGAUUUGUAUCAUUGUa........................ len:21 al:4
.................................................UUCCAGAUUUGUAgCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUa.......................... len:19 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUgU...................... len:23 al:183
.................................................UUCCAGAUUUGUAUCAUUGgU........................ len:21 al:2
.................................................UUCuAGAUUUGUAUCAUUGUUAU...................... len:23 al:4
.................................................UUCCAGAUUUGUAUCAUUGUUAU...................... len:23 al:7330
.................................................UUCCAGAUUUGUAUCAUUGUc........................ len:21 al:26
.................................................UUCCAGAUUUGUAUCAUUcUUAU...................... len:23 al:2
.................................................UUCCAGAUUUGUAUCAUUGUUAaG..................... len:24 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUcU...................... len:23 al:14
.................................................UUCCAGAUUUGUAUCAUUGUUAa...................... len:23 al:216
.................................................UUCCAGAUUUGUAUCAUUGaUAU...................... len:23 al:1
.................................................UUCCAGAUUUGUAUCAUUGUUAUaA.................... len:25 al:1
.................................................UUCCAGAUUUGUAUCAUUGgUAU...................... len:23 al:2
.................................................UUCCAGAUUUGUAUCAUUGUcAU...................... len:23 al:15
.................................................UUCCAGAUUUGUAUgAUUGUUAU...................... len:23 al:2
.................................................UUCCAGAUUUGUAUCAUUGUaAU...................... len:23 al:1
.................................................UUCCAGAUUUGgAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCAGAUUUaUAUCAUUGU......................... len:20 al:1
.................................................UUCCAGuUUUGUAUCAUUGUUAU...................... len:23 al:1
.................................................UUCCcGAUUUGUAUCAUUGUUAU...................... len:23 al:2
.................................................UUCCAGAUUUGUAUCAUUGUUAc...................... len:23 al:1418
.................................................cUCCAGAUUUGUAUCAUUGUU........................ len:21 al:3
.................................................UUCCAGAUUUGUAUCAUUaUUAU...................... len:23 al:2
.................................................UUCCAGAUUUGUAUCAUaGUUAU...................... len:23 al:2
.................................................UUCCAGAUcUGUAUCAUUGUUAU...................... len:23 al:16
..................................................cCCAGAUUUGUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCAGAUUUGUAUCAUUGUUA....................... len:21 al:2
..................................................UCCAGAUUUGUAUCAUUGUUAUa..................... len:23 al:2
..................................................UCCAGAUUUGUAUCAUUGUUAc...................... len:22 al:30
..................................................UCCAGAUUUGUAUCAUUGUUAU...................... len:22 al:138
..................................................UCCAGAUUUGUAUCAUUGUUAg...................... len:22 al:2
..................................................UCCAGAUUUGUAUCAUUGUUAUc..................... len:23 al:1
..................................................UCCAGAUUUGUAUCAUUGUUAUu..................... len:23 al:11
..................................................UCCAGAUUUGUAUCgUUGUU........................ len:20 al:1
..................................................UuCAGAUUUGUAUCAUUGUUAU...................... len:22 al:2
..................................................UCCAGAUaUGUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCgGAUUUGUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCAGAUUcGUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCAGAUUUGUAcCAUUGUUAU...................... len:22 al:1
..................................................UCCAGAUUUuUAUCAUUGUUAU...................... len:22 al:1
..................................................UCCAGAUUUGUAUCAUUGUUAa...................... len:22 al:6
..................................................UCCAGAUUUGUAUCAUUGUUgU...................... len:22 al:3
..................................................UCCAuAUUUGUAUCAUUGUUAU...................... len:22 al:1
....................................................CAGAUUUGUAUCAUUGUUAU...................... len:20 al:1
.............................................................AUCAUUGUUAUGACUUAUGGA............ len:21 al:1
................................................................AUUGUUAUGACUUAUGGAGaA......... len:21 al:1