Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000014:2594743-2594833 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/strucVis/Cluster_4423.ps
Locus Name: Cluster_4423
GCUUUCUGUCAUUGUUGUACUGAAACAUUAACACGCCAAUGAUGUUAUCCGUGGUGCGUUAUUGUUUCGGUGUAACUAUGUCAUCAACCAA
......((.(((.((((((((((((((.((((.(((((..(((...)))..))))).)))).)))))))))))))).))).))........ (-31.40)
....................UGAAACAUUAACACGCCAAUGg................................................. len:22 al:2
....................UGAAACAUUAACACGCCAAU................................................... len:20 al:1
....................UGAAACAUUAACACGCCAAUGAUu............................................... len:24 al:24
....................UGAAACAUUAACACGCCAAUGAc................................................ len:23 al:2
....................UGAAACAUUAACACGCCAAUGAUc............................................... len:24 al:3
....................UGAAACAUUAgCACGCCAAUG.................................................. len:21 al:1
....................UGAAACAUUAACACGCCAAUGAU................................................ len:23 al:34
....................UGAAACAUUAACACGCa...................................................... len:17 al:1
....................UGAAACAUUAACACGCCAAgG.................................................. len:21 al:4
....................UGAAACAUUAACACGCuA..................................................... len:18 al:1
....................UGAAACAUUAACACGCCA..................................................... len:18 al:9
....................UGAAACAUUAACACGCCAAUGAUa............................................... len:24 al:6
....................UGAAACAUUAACACGCCAAUGAUG............................................... len:24 al:1
....................UGAAACAUUAACACGCCAAUa.................................................. len:21 al:1
....................UGAAACAUUAACACGCCAAcG.................................................. len:21 al:1
....................UGAAACAUUAACACGCCAAUG.................................................. len:21 al:7
....................UGAAACAUUAACACGCCAAUGAa................................................ len:23 al:3
....................UGAAACAUUAACACGCCAAUGA................................................. len:22 al:37
....................UGAAACAUUAACACGCCAAc................................................... len:20 al:1
....................UGAAACAUUAACgCGC....................................................... len:16 al:1
....................UGAAACAUUAACACGCuAAUGAU................................................ len:23 al:1
....................UGAAACAUUAACACGCCAAUGAcG............................................... len:24 al:1
....................UGAAACAUUAACACGCCAAUGAg................................................ len:23 al:2
....................UGAAACAUUAACACGCC...................................................... len:17 al:2
....................cGAAACAUUAACACGCCAAUGAU................................................ len:23 al:2
....................UGAgACAUUAACACGCCAAUGA................................................. len:22 al:1
....................UGAAACAUUAACACGCCAAUGgU................................................ len:23 al:2
....................UaAAACAUUAACACGCCAAUGA................................................. len:22 al:1
.................................................CGUGGcGCGUUAUUGUUUCG...................... len:20 al:2
.................................................CGUGGUGCGUUAUUGUUUCGu..................... len:21 al:1
.................................................CGUGGUGCGUUAUUGUUUCGGUa................... len:23 al:1
.................................................CGUGGUGCGUUAUUGUUUCGGU.................... len:22 al:53
.................................................CGUGGUGCGUUAUUGUUUCGGUc................... len:23 al:1
.................................................CGUGGcGCGUUAUUGUUU........................ len:18 al:2
.................................................CGUGGcGCGUUAUUGUUUC....................... len:19 al:39
.................................................CGUGGUGCGUUAUUGUUUCaG..................... len:21 al:1
.................................................CGUGGUGCGUUAUUGUUUCa...................... len:20 al:1
.................................................CGUGGUGCGUUAUUGUUUCGGa.................... len:22 al:5
.................................................CGUGGUGCGUUAUaGUUUCGGU.................... len:22 al:1
.................................................CGUGGUGCGUUAUUGUUUCGGc.................... len:22 al:14
.................................................CGUGGcGCGUUAUUGUUUCGGU.................... len:22 al:50
......................................................cGCGUUAUUGUUUCGGUGUA................. len:20 al:1
......................................................UGCGUUAUUGUUUCGGUGUu................. len:20 al:1
......................................................UGCGUUAUUGUUUCGGUGUA................. len:20 al:1
.......................................................GCGUUAUUGUUUCGGU.................... len:16 al:1
.......................................................................GUAACUAUGUCAUCAACCAA len:20 al:1