Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000000:20372416-20372510 minus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/strucVis/Cluster_396.ps
Locus Name: Cluster_396
AUAUGCAGUGAAUUAAGACACUAAACCAGACUAGGCUUCAGCAUAUUUAUUUUGUCAAGUCUAGGCUGGUUAGUUUUCUCACUUCACACUUCAAU
.......(((((...(((.(((((.((((.((((((((..(((.........))).)))))))).)))))))))..)))...)))))........ (-26.60)
AUAUGCAGUGAAgUAAGACA........................................................................... len:20 al:1
.UAUGCAGUGAAgUAAGACA........................................................................... len:19 al:1
....................CUAAACCAGACUAGGCg.......................................................... len:17 al:1
....................CUAAACCAGACUAGGCaU......................................................... len:18 al:1
....................CUAAACCAGACUAGGCUUCAGCu.................................................... len:23 al:88
....................CcAAACCAGACUAGGCUUCAGC..................................................... len:22 al:1
....................CUAgACCAGACUAGGCUUCAGC..................................................... len:22 al:3
....................CUAAACCcGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAGGCUUCAGaA.................................................... len:23 al:1
....................CUAAACCAGACUAGGu........................................................... len:16 al:2
....................CUAAACCAGACUAGGCUUCAcC..................................................... len:22 al:1
....................CUAAACCgGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAGGCUUCAGCg.................................................... len:23 al:22
....................CUAAACCAGACUAGGCUUCcGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAcCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCA....................................................... len:20 al:18
....................CUAAACCAGACUAGGCUUCAGCAUAUa................................................ len:27 al:1
....................CUAAACCAGACUAGGCU.......................................................... len:17 al:1
....................CUAAACCAGgCUAGGCUUCAGCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAGg..................................................... len:22 al:2
....................CUAAACCAGACUAGGCUUCAGCAa................................................... len:24 al:7
....................CUAAACCAGACUAGGCUcCAGCA.................................................... len:23 al:1
....................aUAAACCAGACUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAaC..................................................... len:22 al:21
....................CUgAACCAGACUAGGCUUC........................................................ len:19 al:1
....................CUAAACCAGACUAGGCUcC........................................................ len:19 al:1
....................CUAAACCAGACUAGGCUUCAGCAaAU................................................. len:26 al:1
....................CUgAACCAGACUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUuGGCUUCAGC..................................................... len:22 al:1
....................CcAAACCAGACUAGGCUUC........................................................ len:19 al:1
....................CUAAACCAGACUAGGuUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUC........................................................ len:19 al:93
....................CUAAACCAGACUAGGCcUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAa...................................................... len:21 al:2
....................CUAAACCAGACUAGGCUaC........................................................ len:19 al:3
....................CUAAACCAGACUAGGCUUCAGCAU................................................... len:24 al:15
....................CUAAACCAGACUAGGCUUCAG...................................................... len:21 al:18
....................CUAAACCAGACUAGGC........................................................... len:16 al:1
....................CUAAACCAGACUAGGCUa......................................................... len:18 al:1
....................CUAAACCAGACUAGGCUUCAGC..................................................... len:22 al:548
....................CUAAACCAGACUAGGCUUCAu...................................................... len:21 al:3
....................CUAAACCAGuCUAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCAuC..................................................... len:22 al:1
....................CUAAACCAGACcAGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCgGACUAGGCUUCAGCA.................................................... len:23 al:3
....................CUAAgCCAGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAGGCUUCAGCAUA.................................................. len:25 al:2
....................CUAAACCAGACUgGGCUUCAGC..................................................... len:22 al:1
....................CUAAACCAGACUAGGCUUCu....................................................... len:20 al:2
....................CUAAACCAGACUAGGCUUCAGa..................................................... len:22 al:60
....................CUAAACCAGACUAGGCUUCAGCc.................................................... len:23 al:31
....................CUAAgCCAGACUAGGCUUCAGCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUu........................................................ len:19 al:4
....................CUgAACCAGACUAGGCUUCAGCA.................................................... len:23 al:4
....................CUAAACCAGACUAGGCUUCAGgAU................................................... len:24 al:1
....................CUAAACCAGACUAGGCUUCcG...................................................... len:21 al:1
....................CUAAACCAGACUAGGCUUCAGCA.................................................... len:23 al:234
....................CUAAACCAGACUAGGCUcCA....................................................... len:20 al:1
....................CUAAACCAGACUAGGCcU......................................................... len:18 al:1
....................CUAAACCAGACUAGGCUUCAGCuU................................................... len:24 al:3
....................CUAAACCAGACUAGGCUUCAGuA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCUUCAGCAUuU................................................. len:26 al:1
....................CUAAACCAGACUAGGCUUa........................................................ len:19 al:5
....................CUAAACCAGACUAGGCUUCgGCA.................................................... len:23 al:2
....................uUAAACCAGACUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAGGCUcCAGC..................................................... len:22 al:4
....................CUAAACCAGAuUAGGCUUCAGCA.................................................... len:23 al:1
....................CUAAACCAGACUAGGCa.......................................................... len:17 al:1
....................CUAAACCAGACUAGGCUUCAGCAc................................................... len:24 al:1
....................CUAAACCAGACUAGGCUUCgG...................................................... len:21 al:1
....................CUAAACCAGACUAGGCUUCAGCAUu.................................................. len:25 al:3
....................uUAAACCAGACUAGGCUUCAGCA.................................................... len:23 al:2
....................CUAAACCAGgCUAGGCUUCAGC..................................................... len:22 al:2
....................CUAAACCAGACUAGGCUU......................................................... len:18 al:6
....................CUAAACCAGACUAGGCUUCAGu..................................................... len:22 al:92
....................CUAAACCAGACUAGGCUUCAGCAg................................................... len:24 al:2
.....................UAAACCuGACUAGGCUUC........................................................ len:18 al:1
.....................aAAACCAGACUAGGCUUCAGCAU................................................... len:23 al:1
.....................UAAACaAGACUAGGCUUCAGC..................................................... len:21 al:1
.....................UAAACCAGACUAGGCUaC........................................................ len:18 al:2
.....................UAAACCAGACUAGGCUUCAGCc.................................................... len:22 al:4
.....................UAAACCAGACUAGGCUUCAGCAc................................................... len:23 al:12
.....................UAAACCAGACUAGGCUUCAGCAa................................................... len:23 al:6
.....................UAAACCAGACUAGGCUUCAGu..................................................... len:21 al:12
.....................UAAACCAGACUAGGCUUCAaC..................................................... len:21 al:3
.....................UAAACCAGACUAGGCUUaAGCAU................................................... len:23 al:1
.....................UAAACCAGACUAGGCUUCAGCu.................................................... len:22 al:16
.....................UAAACCAGACUAGGCUUCAGCAg................................................... len:23 al:4
.....................UAAACCAGACUAGGCUcC........................................................ len:18 al:1
.....................UAAACCAGACUAGGCUUCAGCAUc.................................................. len:24 al:1
.....................UAAACCAGACUAGGCUUCAGa..................................................... len:21 al:13
.....................UAAACCAGACUAGGCUUCAGCAUA.................................................. len:24 al:4
.....................UAAACCAGACUAGGCUUCAGCAUu.................................................. len:24 al:4
.....................UAAACCAGACUAGGCUUCAGCg.................................................... len:22 al:6
.....................UAAACCAGACUAGGCUUCAGCcU................................................... len:23 al:1
.....................UAAACCAGACUAGGCUUCAGCA.................................................... len:22 al:19
.....................UAgACCAGACUAGGCUUCAGCAU................................................... len:23 al:2
.....................UAAACCAGACUAGGCUUCAGaA.................................................... len:22 al:2
.....................UAAACCAGACUAGGCUUCAGCAU................................................... len:23 al:47
.....................UAAACCAGACUAGGCUUC........................................................ len:18 al:18
.....................UAAACCAGACUgGGCUUCAGC..................................................... len:21 al:2
.....................UAAACCAGACUAGGCUUCAGC..................................................... len:21 al:90
.....................UAAACCAGACUAGGCUUCAG...................................................... len:20 al:7
.....................UAAACCAGACUAGGCUUCAGCgU................................................... len:23 al:3
......................AAACCAGACUAGGCUUCAGa..................................................... len:20 al:1
......................cAACCAGACUAGGCUUCAGC..................................................... len:20 al:2
......................AAACCAGACUAGGCUUCAGC..................................................... len:20 al:3
......................AAACCAGACUAGGCUUCAGCA.................................................... len:21 al:1
......................AAACCAGACgAGGCUUC........................................................ len:17 al:1
......................AAACCAGACUAGGCUUCAGCAc................................................... len:22 al:1
........................ACCAGACUAGGCUUC........................................................ len:15 al:1
........................ACCAGACUAGGCUUCAGCA.................................................... len:19 al:1
.........................CCAGACUAGGCUUCAGC..................................................... len:17 al:1
...........................AGACUAGGCUUCAGC..................................................... len:15 al:1
.............................................UUUAUUUUGUCAAGUCUAGGCUGGUUAGUc.................... len:30 al:1
.............................................UUUAUUUUGUCAAGUCUAGGCUGGUUAGUUU................... len:31 al:5
.............................................UUUAUUUUGUCAAGUCUAGGCUGGUUAGUU.................... len:30 al:1
...............................................UAUUUUGUCAAGUCUAGGCUGGUUAGUUc................... len:29 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUUc................... len:24 al:2
....................................................UGUCAAGUCUAGGCUGGUUAGUc.................... len:23 al:3
....................................................UGUCAAGUCUAGGCUGGUUAGUUU................... len:24 al:27
....................................................UGcCAAGUCUAGGCUGGUUAGUUU................... len:24 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUUa................... len:24 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUgU................... len:24 al:2
....................................................UGUCAAGUCUAGGCUGGUUAGU..................... len:22 al:1
....................................................UGUCAAGUCUAGGCUGGUUAGUU.................... len:23 al:3
.....................................................GUCAAGUCUAGGCUGGUUAGUUU................... len:23 al:1
.....................................................GUCAAGUCUAGGCUGGUU........................ len:18 al:1
.....................................................cUCAAGUCUAGGCUGGUUAGUUU................... len:23 al:18
......................................................UCAAGUCUAGGCaGGUUAGUUU................... len:22 al:164
......................................................UCAAGUCUAGGCUGGa......................... len:16 al:1
......................................................UCAuGUCUAGGCUGGUUAGUU.................... len:21 al:3
......................................................cCAAGUCUAGGCUGGUUAGUU.................... len:21 al:184
......................................................UaAAGUCUAGGCUGGUUAGUU.................... len:21 al:3
......................................................UCAgGUCUAGGCUGGU......................... len:16 al:1
......................................................UCAAGUCUAGGCaGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUcGGCUGGUUAGUUU................... len:22 al:44
......................................................UCAAGUCUAGGCUGGUUcGUUU................... len:22 al:33
......................................................UCAAGUCUAGGCUGGUaAGUUU................... len:22 al:63
......................................................UCAAGUCUAGGCUGGUcAGUUU................... len:22 al:518
......................................................UCAAGUCUAGGCaGGUUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGGUUAGUUa................... len:22 al:23255
......................................................aCAAGUCUAGGCUGGU......................... len:16 al:1
......................................................UCAAGUCUAGGCUGGUUA....................... len:18 al:15
......................................................UuAAGUCUAGGCUGGUUAGUUU................... len:22 al:453
......................................................UCAAaUCUAGGCUGGUU........................ len:17 al:2
......................................................UCAAGUCUuGGCUGGUUAGUU.................... len:21 al:6
......................................................UCAgGUCUAGGCUGGUUAGUUU................... len:22 al:1270
......................................................UCAAGUCUAGGCUGGUUuGUU.................... len:21 al:3
......................................................UCAAGcCUAGGCUGGU......................... len:16 al:1
......................................................UCAAGUCUAGGCUGGUUAGU..................... len:20 al:457
......................................................UCAAGUCUAGGCUGGUUAaUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGUg........................ len:17 al:41
......................................................UCAAGUCUgGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAGUCUAGGCUGGg......................... len:16 al:1
......................................................UCAAGUCUAGcCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGGUgAGUU.................... len:21 al:3
......................................................UCAAGUCUAGGCgGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGUU........................ len:17 al:1052
......................................................UCAAGUCUAGGCUaGUUAG...................... len:19 al:1
......................................................UCAAGUCaAGGCUGGUUAGUU.................... len:21 al:2
......................................................UCAAaUCUAGGCUGGUUAGUU.................... len:21 al:10
......................................................aCAAGUCUAGGCUGGUUAGUUU................... len:22 al:2197
......................................................UCAAGUCUAGGCUGGUUAGUUUUaU................ len:25 al:2
......................................................UCAAGUCUAGGCUGGUUAGgU.................... len:21 al:415
......................................................UCAAGUCUgGGCUGGUU........................ len:17 al:2
......................................................UCAAGUCUAGGCUGGUgAGUUU................... len:22 al:43
......................................................cCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:8
......................................................UCAAaUCUAGGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGGUgAGUUUUC................. len:24 al:1
......................................................UCAAGUCUAGGCUGGUUuGU..................... len:20 al:11
......................................................UCAAGUCUAGGCUGGUUAGUgUU.................. len:23 al:2
......................................................UCAAGUCgAGGCUGGUUAGUUU................... len:22 al:49
......................................................UCAAGUCUAGGCUGGUUAGUUUg.................. len:23 al:13
......................................................UCAAGUCUAGGCUGGUUAuUUU................... len:22 al:126
......................................................UCAAGUCcAGGCUGGUU........................ len:17 al:6
......................................................UCAAGUCcAGGCUGGUUAGUU.................... len:21 al:27
......................................................UuAAGUCUAGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAGUCUAGGCUGGUUAGUUg................... len:22 al:6702
......................................................cCAAGUCUAGGCUGGUU........................ len:17 al:22
......................................................UCAAGUCUAGaCUGGUUAGUUU................... len:22 al:292
......................................................UCuAGUCUAGGCUGGUUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAuGCUGGUU........................ len:17 al:1
......................................................aCAAGUCUAGGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAcGCUGGUUAGUUU................... len:22 al:1
......................................................UCAAGUCUAGGCUGaUUAGUUU................... len:22 al:161
......................................................UCAAGUCUAGGCcGG.......................... len:15 al:1
......................................................aCAAGUCUAGGCUGGUUA....................... len:18 al:1
......................................................UCAAGUCUAGGCUGGU......................... len:16 al:36
......................................................UCgAGUCUAGGCUGGUUAGUUU................... len:22 al:1324
......................................................UCAAGUCUAGGCUGaUUAG...................... len:19 al:1
......................................................UaAAGUCUAGGCUGGUU........................ len:17 al:2
......................................................UCAAGUCUAGGCUGuUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGGUUAGaU.................... len:21 al:39
......................................................UCAAGUCUAGGCUGuUUAGUUUU.................. len:23 al:1
......................................................gCAAGUCUAGGCUGGUUAGUUU................... len:22 al:129
......................................................UCAAGUaUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UCAAGUCUAGGCgGGUUAGUUU................... len:22 al:221
......................................................UCAAGUCUAGGCUGGUUgGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUaGUUAGUUU................... len:22 al:337
......................................................UCAAGUaUAGGCUGGUUAGUUU................... len:22 al:60
......................................................UCuAGUCUAGGCUGGUUAGUUU................... len:22 al:220
......................................................cCAAGUCUAGGCUGGU......................... len:16 al:2
......................................................UCAAGUCUAGGCUGGUUAGc..................... len:20 al:89
......................................................UCAAGcCUAGGCUGGUUAGUU.................... len:21 al:43
......................................................gCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGaUGGUU........................ len:17 al:3
......................................................aCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:3
......................................................UCAAGUCUAGGCcGGUUAGUU.................... len:21 al:31
......................................................UCAAGaCUAGGCUGGUUAGUU.................... len:21 al:2
......................................................aCAAGUCUAGGCUGGUU........................ len:17 al:4
......................................................UCAAGUuUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UCAAGUCUAGaCUGGUUAGUU.................... len:21 al:10
......................................................UCAAGUCUAGGCUGGcUAGUUU................... len:22 al:902
......................................................UCAAGUCUAGGCUGGaU........................ len:17 al:22
......................................................UCAgGUCUAGGCUGGUUAGU..................... len:20 al:3
......................................................UCAAGUCUAGuCUGGUUAGUUU................... len:22 al:48
......................................................UCAAGUCUAGGCaGGUU........................ len:17 al:1
......................................................UCAgGUCUAGGCUGGUU........................ len:17 al:2
......................................................aCAAGUCUAGGCUGGUUAGUU.................... len:21 al:78
......................................................UCcAGUCUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UCAAGUCUAGGuUGGUUAGUU.................... len:21 al:4
......................................................UCAAGUCUAGGCUGGUc........................ len:17 al:220
......................................................UCAAGUCUAGGCUGGgU........................ len:17 al:42
......................................................UCAAGUCUAGGCUGGUUAc...................... len:19 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUUa.................. len:23 al:1374
......................................................UCAAGUCUAGGCgGGUUAGU..................... len:20 al:1
......................................................UCAAGcCUAGGCUGGUU........................ len:17 al:2
......................................................UCAAGUCUuGGCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUUUu................. len:24 al:13
......................................................UCAAGUCUAGGCUGGUUAGgUUU.................. len:23 al:1
......................................................UCAAGUCUuGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCUAGGCUGGUcAGUU.................... len:21 al:27
......................................................UCAAGUCUAGGCUGGUUAGg..................... len:20 al:16
......................................................UCAAGUCUAGGCUGcUUAGUUU................... len:22 al:13
......................................................UCAAGUCUAGGgUGGUUAGUUU................... len:22 al:31
......................................................UCAAGcCUAGGCUGGUUAGUUU................... len:22 al:1179
......................................................UCgAGUCUAGGCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGuUUAGUUU................... len:22 al:107
......................................................UCAAGUCUAGGCUGGUUgGUU.................... len:21 al:35
......................................................UCAAGUCUAGGCUGGUUgGUUU................... len:22 al:809
......................................................UCAAGUCUAGGuUGGUU........................ len:17 al:2
......................................................UCAAGUCUAGGCUGaU......................... len:16 al:3
......................................................UCAAGgCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUUaC................. len:24 al:21
......................................................UCAAGUCUAGGCaGGUUAGUU.................... len:21 al:8
......................................................UCAAGUCUAcGCUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGGUUuGUUU................... len:22 al:47
......................................................UCAAGUuUAGGCUGGUU........................ len:17 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUcU.................. len:23 al:2
......................................................UaAAGUCUAGGCUGGUUAGUUU................... len:22 al:228
......................................................UCAAGUCUAGGCUGaUUAGUU.................... len:21 al:5
......................................................UCAAGUCUAGGCUGGc......................... len:16 al:1
......................................................UCAAGUCUAGGCUGGgUAGUU.................... len:21 al:5
......................................................UCAAGUCaAGGCUGGUUAGUUU................... len:22 al:90
......................................................UCAAGUCUAGGCUGGUUAGUUUc.................. len:23 al:63
......................................................UCAAGUgUAGGCUGGUUAGUUU................... len:22 al:6
......................................................UCgAGUCUAGGCUGGUUAGUU.................... len:21 al:52
......................................................UCAAGUCUgGGCUGGUUAGUUU................... len:22 al:1098
......................................................UCAAGUCUAGGCUGcUU........................ len:17 al:4
......................................................UCAAGUCUAGGCUGGUUAGUc.................... len:21 al:2979
......................................................UCAAGUCUAGGCUGGUUAaU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGGUUcG...................... len:19 al:1
......................................................UuAAGUCUAGGCUGGUUAGUU.................... len:21 al:15
......................................................UCAAGUCUAGGCUGGUUAcUUU................... len:22 al:28
......................................................UCAAGUCUAGGCUcGUUAGUUU................... len:22 al:21
......................................................UCAAGUCUAuGCUGGUUAGUUU................... len:22 al:102
......................................................UCAAGUCUAGGCUGGUUAGUg.................... len:21 al:286
......................................................UCAAGgCUAGGCUGGUUAGUUU................... len:22 al:42
......................................................UCAAGUCUAGGCUGGUUAGUa.................... len:21 al:1042
......................................................UCAAGUCUAGGCUGGcUAGUU.................... len:21 al:30
......................................................UCAAGUCgAGGCUGGUUAGUU.................... len:21 al:1
......................................................UCcAGUCUAGGCUGGUUAGUUU................... len:22 al:89
......................................................UCAAGUCUAGGCUGGUUAu...................... len:19 al:1
......................................................UCAAGUCUAGGCUGGcUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGgUGGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGuUGGUUAGUUU................... len:22 al:273
......................................................UCAAGUCUAGGCUGGUUAa...................... len:19 al:8
......................................................UCAAGUCUAGaCUGGUU........................ len:17 al:1
......................................................UCAAGaCUAGGCUGGUUAGUUU................... len:22 al:136
......................................................UCAgGUCUAGGCUGGUUAGUU.................... len:21 al:58
......................................................UCAAuUCUAGGCUGGUUAGUUU................... len:22 al:54
......................................................UCAAGUCUAaGCUGGUUAGUUU................... len:22 al:198
......................................................UCAAGcCUAGGCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUUUa................. len:24 al:23
......................................................UCAAGUCUAGGCUGGUUAGUUc................... len:22 al:64883
......................................................UCAAGUCUAGGCUGGUUAGUUU................... len:22 al:353179
......................................................UCAAGUCUAuGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUGGUUAG...................... len:19 al:14
......................................................UCAAaUCUAGGCUGGUUAGUUU................... len:22 al:131
......................................................UCAAGUCUAGGCUGGgUAGUUU................... len:22 al:133
......................................................UCAAGUCUAGGCUGGUUAGUUgU.................. len:23 al:10
......................................................UCAAGUCUAGGCcGGUU........................ len:17 al:2
......................................................UCAAGUCUAGGCUGGaUAGUU.................... len:21 al:2
......................................................cCAAGUCUAGGCUGGUUAGUUU................... len:22 al:5093
......................................................UCAAGUCUAGGCUGGUUg....................... len:18 al:2
......................................................UCAAGUCUAGGCUGGUUcGU..................... len:20 al:1
......................................................UCAgGUCUAGGCUGGUUAG...................... len:19 al:1
......................................................UgAAGUCUAGGCUGGUUAGUU.................... len:21 al:3
......................................................UCAAGUCUAGGCUGGUUAuUU.................... len:21 al:4
......................................................UCAAGUCUuGGCUGGUUAGUUU................... len:22 al:88
......................................................UCAAGUCUAGGCUGGUUAGa..................... len:20 al:10
......................................................UCAAGUCUAGGCUGGUUAGcUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUGGUUAGUcU................... len:22 al:1785
......................................................UCAuGUCUAGGCUGGUUAGUUU................... len:22 al:83
......................................................UCAAGUCUAGGCUGGUUAGUgU................... len:22 al:8250
......................................................UCAAGUCUAGGCUGGUUAGgUU................... len:22 al:392
......................................................UCAAGUuUAGGCUGGUUAGUUU................... len:22 al:96
......................................................UCAAGcCUAGGCUGGUUAGU..................... len:20 al:1
......................................................UCAAGUCUAGGCUaGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGG.......................... len:15 al:6
......................................................UCAAGUCUAGGCcGGU......................... len:16 al:1
......................................................UCAAuUCUAGGCUGGUUAGUU.................... len:21 al:1
......................................................cCAAGUCUAGGCUGGUUAGU..................... len:20 al:4
......................................................UCuAGUCUAGGCUGGUUAGUU.................... len:21 al:8
......................................................UCAAGUCUAGGCUGGUUgGU..................... len:20 al:2
......................................................UCAAGUCUAGuCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUuGUUAGUU.................... len:21 al:3
......................................................UCAAGUCUAGGCUGGUa........................ len:17 al:143
......................................................UCAAGUCUAaGCUGGUUAGUU.................... len:21 al:7
......................................................UCAAGUCUAGGCcGGUUAGUUU................... len:22 al:845
......................................................UCAAGUCUAGGCUGaUU........................ len:17 al:1
......................................................UCAAGUCUAGGCUGGUUAGUaU................... len:22 al:4455
......................................................UCAAGUCUAGGCUGGUUAGUU.................... len:21 al:13769
......................................................UCAAGUCUAGGCUGGUUAGaUU................... len:22 al:127
......................................................UCAAGUCUAGGaUGGUUAGUU.................... len:21 al:1
......................................................UCAcGUCUAGGCUGGUUAGUU.................... len:21 al:4
......................................................UCAAGUCUAGcCUGGUUAGUUU................... len:22 al:14
......................................................UCAAcUCUAGGCUGGUUAGUUU................... len:22 al:9
......................................................gCAAGUCUAGGCUGGUUAGUU.................... len:21 al:2
......................................................UgAAGUCUAGGCUGGUUAGUUU................... len:22 al:86
......................................................UCAAGUCUAGGCUGGUUAaUUU................... len:22 al:98
......................................................UCAAGUCUAGGCUGGUUAGcUU................... len:22 al:2615
......................................................UCAAGUCUAGGCUGGUUAGcU.................... len:21 al:118
......................................................UCAAGUCUAGaCUGGUUAGUUUU.................. len:23 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUaU.................. len:23 al:15
......................................................UCAgGUCUAGGCUGGUUAGUUUU.................. len:23 al:2
......................................................UCAAGUCUAGGCUaGUUAGUU.................... len:21 al:11
......................................................UCAAGUCUAGGCUGcUUAGUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUuGUUAGUUU................... len:22 al:77
......................................................UCAAGUCUAGGaUGGUUAGUUU................... len:22 al:47
......................................................UCAAGUCUAGGCUGGaUAGUUU................... len:22 al:92
......................................................UCAAGUCUAGGCUcGUUAGUU.................... len:21 al:1
......................................................UCAAGUCUgGGCUGGUUAGUU.................... len:21 al:37
......................................................UCgAGUCUAGGCUGGUU........................ len:17 al:7
......................................................UCAAGUCUAGGCUGGUUAcUU.................... len:21 al:1
......................................................UCAAGUCUAGGCUGGUUAGUUUU.................. len:23 al:517
......................................................UCAAGUCUAGGCcGGUUAGUUUU.................. len:23 al:2
......................................................UCAAGUCcAGGCUGGUUAGUUU................... len:22 al:716
......................................................UCAcGUCUAGGCUGGUUAGUUU................... len:22 al:33
......................................................UCAAGUCUAGGCgGGUUAGUU.................... len:21 al:9
......................................................UCAAGUCUcGGCUGGUUAGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGUUcGUU.................... len:21 al:2
......................................................UCAAGUCUAGGCUGGcU........................ len:17 al:15
......................................................UCAAGUCcAGGCUGGUUAGU..................... len:20 al:2
......................................................UCAAGUCUAGGCUGGUaAGUU.................... len:21 al:3
.......................................................CAAGUCcAGGCUGGUUAGUUU................... len:21 al:3
.......................................................CAAGUCUAGGCUGGUUAGUc.................... len:20 al:2
.......................................................CAAGUCUAGGCUGGUUAGgU.................... len:20 al:1
.......................................................CAAGUCUAaGCUGGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUgU................... len:21 al:12
.......................................................CAAGUCUAGGCUGGUUAGUU.................... len:20 al:21
.......................................................CAAGUCUAGGCUGGUUAGUUU................... len:21 al:631
.......................................................CAAGUCUAGGCUGGUUAGgUU................... len:21 al:1
.......................................................uAAGUCUAGGCUGGUUAGUUU................... len:21 al:13
.......................................................CAAGUCUAGGCUGGUUAGUg.................... len:20 al:1
.......................................................CAAGUCUAGGCUGGUUAGcUU................... len:21 al:3
.......................................................CAAGUCUAGGCUGGcUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUgGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUUc................... len:21 al:106
.......................................................CAAGcCUAGGCUGGUUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUAGUa.................... len:20 al:1
.......................................................CAAGUCUAGGCcGGUUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUUAGUUUaC................. len:23 al:1
.......................................................CgAGUCUAGGCUGGUUAGUUU................... len:21 al:3
.......................................................CAAGUCgAGGCUGGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUUg................... len:21 al:12
.......................................................CAAGUCUAGGCUGGUUAGUUUa.................. len:22 al:3
.......................................................CAcGUCUAGGCUGGUUAGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUGGUa........................ len:16 al:1
.......................................................CAAGUCUAGGCUGGUUAGU..................... len:19 al:1
.......................................................CAAGUCUAGGCUuGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUaU................... len:21 al:14
.......................................................CAAGUCUAGGCUGGUUcGUUU................... len:21 al:2
.......................................................CAAGUCUAGGCUaGUUAGUUU................... len:21 al:1
.......................................................CAAGUCUAGGCUGGUUAGUcU................... len:21 al:4
.......................................................CAAGUCUAGGCUGGUU........................ len:16 al:3
.......................................................CAAGUCUAGGCUGGUUAGUUUUu................. len:23 al:1
.......................................................CAAGUCUAGGuUGGUUAGUUU................... len:21 al:2
.......................................................CAgGUCUAGGCUGGUUAGUUU................... len:21 al:3
.......................................................CAAGUCUAGGCUGGUUAGUUa................... len:21 al:55
........................................................AAGUCUAGGCUGGUUAGUUaU.................. len:21 al:1
........................................................AAGUCUAGGCUGGcUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUgGUUU................... len:20 al:2
........................................................AAGUCUAGGCUGGUUAGUa.................... len:19 al:2
........................................................AAGcCUAGGCUGGUUAGUUU................... len:20 al:3
........................................................AAGUCcAGGCUGGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUUUa.................. len:21 al:2
........................................................AAGUCUAGGCUaGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCgGGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGcUU................... len:20 al:2
........................................................AAGUCUAGGCUGGUUAGUcU................... len:20 al:4
........................................................AAGUCUAGGCUGGaUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUgU................... len:20 al:8
........................................................uAGUCUAGGCUGGUUAGUUU................... len:20 al:1
........................................................AAGUCUgGGCUGGUUAGUUU................... len:20 al:3
........................................................AAGUCUAGGCUGGUUAGUUU................... len:20 al:213
........................................................AAGUCUAGGCUGGUUAGUU.................... len:19 al:12
........................................................AuGUCUAGGCUGGUUAGUUU................... len:20 al:1
........................................................AAGUCUAGGCUGGUUAGUUg................... len:20 al:5
........................................................AAGUCUAGGCUGGUUAGUUa................... len:20 al:12
........................................................AAGUCUAGGCUGGUUAGUaU................... len:20 al:4
........................................................AAGUCUAGGCUGGUUAGUUc................... len:20 al:49
........................................................AAGUCUAGGCUGGUa........................ len:15 al:1
........................................................AAGUCUAGGCUGGUUAGUc.................... len:19 al:3
........................................................cAGUCUAGGCUGGUUAGUUU................... len:20 al:5
........................................................AAGUCUAGGCUGGUU........................ len:15 al:1
.........................................................AGUCUAGGCUGGUUAGUUU................... len:19 al:29
.........................................................AGUCUAGGCUGGUUAGUaU................... len:19 al:1
.........................................................AGUCUAGGCUGGUUAGUU.................... len:18 al:4
.........................................................AGUCUAGGCUGGUUAGUUg................... len:19 al:1
.........................................................AGUCUAGGCUGGUUAGUUa................... len:19 al:3
.........................................................AGUCUAGGCUGGUUAGUUc................... len:19 al:3
.........................................................AGUCUAGGCUGGUUAGUa.................... len:18 al:1
..........................................................GUCUAGGCUGGUUAGUU.................... len:17 al:2
..........................................................GUCUAGGCUGGUUAGUUa................... len:18 al:1
..........................................................GUCUAGGCUGGUUAGUUU................... len:18 al:2
...........................................................UCUAGGCUGGUUAGU..................... len:15 al:2
...........................................................UCUAGGCUGGUUAGUUU................... len:17 al:10
...........................................................UCUAGGCUGGUUAGUUc................... len:17 al:1
...........................................................UCUAGGCUGGUUAGUgU................... len:17 al:1
...........................................................UCUAGGCUGGUUAGUU.................... len:16 al:2
............................................................CUAGGCUGGUUAGUUc................... len:16 al:2
............................................................CUAGGCUGGUUAGUUU................... len:16 al:4
.............................................................UAGGCUGGUUAGUUU................... len:15 al:1