Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000008:3576420-3576514 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/strucVis/Cluster_3093.ps
Locus Name: Cluster_3093
AUUCCGUCAGGGUUUUUGUCAUCGAUGGAACACACAAGUAGAGAUUAUAUACUUUACUUGUUGUAUUCUAUUAUAACAGAGACCUAAUUCGUUGA
....((...((((((((((.((.(((((((.((((((((((((........))))))))).))).))))))))).))))))))))....)).... (-30.50)
..UCCGUCAGGGUUUUUGUCAg......................................................................... len:20 al:1
.....................UCGAUGGAACACACAAGUAGAGA................................................... len:23 al:1
......................CGAUGGAACACACAAGUAGAGu................................................... len:22 al:1
......................aGAUGGAACACACAAGUAGAGA................................................... len:22 al:2
......................CGAUGGAACACACAAGc........................................................ len:17 al:1
......................CGAUGGAACACACAAGUAGAuA................................................... len:22 al:1
......................CGAgGGAACACACAAGUAGAGA................................................... len:22 al:1
......................CGAUGGAACACACAAGUAGAGc................................................... len:22 al:2
......................CGAUGGAACACACAAGUAG...................................................... len:19 al:11
......................CGAUGGAACACACAAGUAGAGg................................................... len:22 al:2
......................CGAUGGAACACACAAGU........................................................ len:17 al:4
......................CaAUGGAACACACAAGUAGAGA................................................... len:22 al:2
......................CGAUGGAgCACACAAGUAGAGA................................................... len:22 al:1
......................CGAUGGAACACACAAGUAGAG.................................................... len:21 al:5
......................CGAUGGAACACACAAGUAGAa.................................................... len:21 al:2
......................CGAUGGAACACACAAGUAGAGA................................................... len:22 al:89
......................CGAUGGAACACACAAGUAGAGAU.................................................. len:23 al:1
......................CGAUGGgACACACAAGUAGAGA................................................... len:22 al:1
......................CGAUGGAACACACAAGUAGAGAa.................................................. len:23 al:1
......................CGAUGGAACACACAAGUAGA..................................................... len:20 al:2
......................CGAUGGAACACACAAGUAGAGAUU................................................. len:24 al:1
......................CGAUGGAACACACAAGUcG...................................................... len:19 al:1
......................CGAUGGAACACACAAGUAGgGA................................................... len:22 al:3
......................CGAUGGAACACACAAGUAa...................................................... len:19 al:3
.......................GAUGGAACACACAAGUAGAGA................................................... len:21 al:2
.......................GAUGGAACACACAAGUAGAGAUUAU............................................... len:25 al:1
....................................................UUUACUUGUUGUAUUCUAUUAUc.................... len:23 al:4
....................................................UUUACUUGUUGUAUUCUAUUAUg.................... len:23 al:1
....................................................UUUACUUGUUGUAUUCUA......................... len:18 al:1
....................................................UUUACUUGUUGUAUUCUAUUAUu.................... len:23 al:43
....................................................UUUACUUGUUGUAUUCUAUUAU..................... len:22 al:3
....................................................UUUACUUGUUGUAUUCUAUUAUuA................... len:24 al:1
....................................................UUUACUUGUUGUAUUCUAUUAUA.................... len:23 al:4
.....................................................UUACUUGUUGUAUUCUAUUAUc.................... len:22 al:7
.....................................................UUACUUGUUGUAUUCUAUc....................... len:19 al:2
.....................................................UUACUUGUUGUAUUCUAUU....................... len:19 al:5
.....................................................UUAuUUGUUGUAUUCUAUUAU..................... len:21 al:1
.....................................................UUACUUGUUGUAUUCUAUUAU..................... len:21 al:3
.....................................................UUACUUGUUGUAUUCU.......................... len:16 al:1
.....................................................UUACUUGUUGUAUUCUAUUAUu.................... len:22 al:57
.....................................................UUACUUGUUGUAUUCUAUUAUuA................... len:23 al:4
.....................................................UUACUUGUUGUAUUCUAUUAUA.................... len:22 al:8
......................................................UACUUGUUGUAUUCUAUUAUu.................... len:21 al:1
.......................................................ACUUGUUGUAUUCUAUUAUu.................... len:20 al:1
.......................................................gCUUGUUGUAUUCUA......................... len:15 al:1
.........................................................UUGUUGUAUUCUAUUAUu.................... len:18 al:1
.........................................................UUGUUGUAUUCUAUUAUA.................... len:18 al:2