Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/data/Pocillopora_meandrina_HIv1.assembly.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/merged_alignments.bam
Location: Pocillopora_meandrina_HIv1___Sc0000002:3841944-3842042 minus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/F-Pmea/output/13.1-Pmea-sRNAseq-ShortStack-R1-reads/ShortStack_out/strucVis/Cluster_1009.ps
Locus Name: Cluster_1009
AGUUACAUCCUUCGCAGCCCCUCUUUCGGGUGUCACACAACGUCGUCAAGGAGCGUUGUGUAACUCCCUAAGGAAGGCUUGCAAAGGAGGGCAGAAAAC
.(((...(((((.((((((..(((((.(((.((.((((((((((......)).)))))))).)).))).))))).))).))).))))).)))....... (-39.50)
....................CUCUUUCGGGUGUCACACAACGUu....................................................... len:24 al:5
....................CUCUUUCGGGUGUCACACAACGc........................................................ len:23 al:1
....................CUCUUUCGGGUGUCACACAAC.......................................................... len:21 al:32
....................CUCUUUCGGGUGUCACAu............................................................. len:18 al:2
....................CcCUUUCGGGUGUCACACAACG......................................................... len:22 al:1
....................CUCUUUCGaGUGUCACACAACG......................................................... len:22 al:1
....................CUCUUUCGGGUGUCACACAAu.......................................................... len:21 al:3
....................CUCUUUCGGGUGaCACACAAC.......................................................... len:21 al:1
....................CUCUUUCGGGUGUCACACAAg.......................................................... len:21 al:1
....................CUCUUUCGGGUGUCACACA............................................................ len:19 al:13
....................CUCUUUCGGGUGUCACACAACa......................................................... len:22 al:22
....................CUCUUUCGGGUGUCACACg............................................................ len:19 al:1
....................CUCUUUCGGGUGUCACAC............................................................. len:18 al:2
....................CUCUUUCGGGUGUCACACAACG......................................................... len:22 al:47
....................CUCUUUCGGGUGUCACACAACGU........................................................ len:23 al:6
....................uUCUUUCGGGUGUCACACAAC.......................................................... len:21 al:1
.....................UCUUUCGGGUGUCACACAgCGUC....................................................... len:23 al:1
.....................UCUUUCGGGUGUCACACAACGc........................................................ len:22 al:9
.....................UCUUUCGGGUGUCACACAAC.......................................................... len:20 al:1
.....................UCUUUCGGGUGUCACACAACGcC....................................................... len:23 al:1
.....................UCUUUCGGGUGUCACACA............................................................ len:18 al:1
.....................UCUUUCGGGUGUCACACAACGa........................................................ len:22 al:4
.....................UCUUUCGGGUGUCACACAACGUu....................................................... len:23 al:16
.....................UCUUUCGGGUGUCACACAACGUC....................................................... len:23 al:33
.....................UCUUUCGGGUGUCACACAACGU........................................................ len:22 al:28
.....................UCUUUCGGGUGUCACACAACGUa....................................................... len:23 al:6
.....................UCcUUCGGGUGUCACACAACGU........................................................ len:22 al:1
.....................UCUUUCGGGUGUCACACAACGg........................................................ len:22 al:4
.....................UCUUUCGGGUGUCACACAACG......................................................... len:21 al:5
.......................UUUCGGGUGUCACACA............................................................ len:16 al:1
.......................UUUCGGGUGUCACACAACG......................................................... len:19 al:1
.......................UUUCGGGUGUCACACAACGUa....................................................... len:21 al:1
.......................UUUCGGGUGUCACACAACGUC....................................................... len:21 al:11
.......................UUUCGGGUGUCACACAACa......................................................... len:19 al:1
.......................UUUCGGGUGUCACACAAC.......................................................... len:18 al:2
.......................UUUCGGGUGUCACACAACGU........................................................ len:20 al:1
.......................UUUCGGGUGUCACACAACGUu....................................................... len:21 al:1
...................................................AGCGUUGUGUAACUCCCUAAGGu......................... len:23 al:1
.....................................................CGUUGUGUAACUCCCUAu............................ len:18 al:1
.....................................................CGUUGUGUAACUCCCUA............................. len:17 al:2
.....................................................CGUUGUGUAACUCCCUAAGGAAG....................... len:23 al:2
.....................................................CGUUaUGUAACUCCCUAAGGAA........................ len:22 al:1
.....................................................CGUUGUGUAACUCCCUAAGGA......................... len:21 al:1
.....................................................CGUUGUGUAACUCCCUgA............................ len:18 al:1
.....................................................CGUUGUGUAACUCCCUAAGGAg........................ len:22 al:2
.....................................................CGUUGUGUAACUCCCUAA............................ len:18 al:1
......................................................GUUGUGUAACUCCCUAA............................ len:17 al:4
......................................................GUUGUGUAACUCCCUAc............................ len:17 al:1
......................................................GUaGUGUAACUCCCUAAGGAAGG...................... len:23 al:1
......................................................cUUGUGUAACUCCCUAAGGAAGG...................... len:23 al:13
......................................................GUUGUGUAACUCCCUAAGGAAa....................... len:22 al:2
......................................................GUUGUGUAACUCCCUAAGGAAGG...................... len:23 al:1
......................................................GUUGUGUAACUCCCUAAGGAgG....................... len:22 al:1
......................................................aUUGUGUAACUCCCUAAGGAAGG...................... len:23 al:1
......................................................cUUGUGUAACUCCCUA............................. len:16 al:3
......................................................GUUGUGUAACUCCCUAAGGA......................... len:20 al:1
......................................................GUUGUGUAACUCCCUAAGGg......................... len:20 al:2
......................................................GUUGUGUAACUCCCUAAG........................... len:18 al:1
.......................................................UUGUGUAACUuCCUAAGG.......................... len:18 al:1
.......................................................UUGUGUAcCUCCCUAAGGAA........................ len:20 al:2
.......................................................UUGcGUAACUCCCUAA............................ len:16 al:10
.......................................................UUGcGUAACUCCCUAAGGA......................... len:19 al:9
.......................................................UUGUGUAACUCCCUAAGGAAGGC..................... len:23 al:59
.......................................................UUGUGUAACaCCCUAA............................ len:16 al:3
.......................................................UUGUGUAACUCCuUAAGGAAGG...................... len:22 al:28
.......................................................UUGUGUAACUCCCUAAGaA......................... len:19 al:21
.......................................................aUGUGUAACUCCCUAA............................ len:16 al:5
.......................................................UUGUGcAACUCCCUAAGGAAGG...................... len:22 al:126
.......................................................UUGUGUAACUCCCUAAGGAAcGC..................... len:23 al:1
.......................................................UUGUGUAACUCCCUAuGGA......................... len:19 al:4
.......................................................UUGUGUAACUCCCUAcGG.......................... len:18 al:2
.......................................................cUGUGUAACUCCCUAAGGAAGGC..................... len:23 al:1
.......................................................UUGUGUAACaCCCUA............................. len:15 al:1
.......................................................UUGUGUAAaUCCCUAAGGAAGGC..................... len:23 al:1
.......................................................UUGUGUAACUCaCUAAGGAAGG...................... len:22 al:3
.......................................................UaGUGUAACUCCCUAAGGAAGG...................... len:22 al:83
.......................................................UUGcGUAACUCCCUA............................. len:15 al:5
.......................................................UUGUGUAACUCuCUAAGGAAG....................... len:21 al:2
.......................................................UUGUGUAACUCCCUAAGGAAGu...................... len:22 al:3097
.......................................................UUGUGUAACUCCuUAAGGAA........................ len:20 al:1
.......................................................cUGUGUAACUCCCUAAGG.......................... len:18 al:2
.......................................................UUGUGUAACUCCCUAAGGgA........................ len:20 al:16
.......................................................UUGUGUgACUCCCUAAGGAA........................ len:20 al:18
.......................................................UUGUGUAACUCCCUAAGa.......................... len:18 al:44
.......................................................aUGUGUAACUCCCUA............................. len:15 al:7
.......................................................UUGUGUcACUCCCUAAGGAAGG...................... len:22 al:2
.......................................................gUGUGUAACUCCCUAAGGAAGG...................... len:22 al:33
.......................................................UUGUGUAACUCCCUAAGaAAGG...................... len:22 al:19
.......................................................UUGUGUAACUCCCaAAGGAA........................ len:20 al:1
.......................................................cUGUGUAACUCCCUAAGGAAGG...................... len:22 al:529
.......................................................UcGUGUAACUCCCUAAGGAAGG...................... len:22 al:160
.......................................................aUGUGUAACUCCCUAAGGAA........................ len:20 al:9
.......................................................UUGUGcAACUCCCUAAGGA......................... len:19 al:2
.......................................................UUGUGaAACUCCCUAAGGAAGG...................... len:22 al:42
.......................................................UUGUGUAACUCuCUAAGGAA........................ len:20 al:2
.......................................................UUGUGUAACUCCCUAAGGg......................... len:19 al:42
.......................................................UUGUGUAACUCCCUAAGu.......................... len:18 al:9
.......................................................UUGUGUAACUCCCUAAGGAAGGg..................... len:23 al:21
.......................................................UUGUGUuACUCCCUAAGGAAGG...................... len:22 al:12
.......................................................UUGUGUAACUCCCcA............................. len:15 al:46
.......................................................cUGUGUAACUCCCUAAG........................... len:17 al:1
.......................................................UUGUGUAACUCCCUAAaGA......................... len:19 al:1
.......................................................UUGUGUAACUCCCUAAGGuAGG...................... len:22 al:22
.......................................................UUGUGUAACUCCaUA............................. len:15 al:3
.......................................................UUGUGUAgCUCCCUAAGGAAGG...................... len:22 al:194
.......................................................UUGUGUAACUCCCUAAGuA......................... len:19 al:1
.......................................................UUGUGUAACUgCCUAAGGAAGG...................... len:22 al:1
.......................................................UUGUGUAACUCCCUAcG........................... len:17 al:5
.......................................................UaGUGUAACUCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCCUAgGGAAG....................... len:21 al:3
.......................................................UUGUGUAACUCCCUAuGGAAGG...................... len:22 al:17
.......................................................UUGUGUAACUCCCcAAGGAA........................ len:20 al:4
.......................................................UUGUGUAAaUCCCUAAGGAAGG...................... len:22 al:18
.......................................................cUGUGUAACUCCCUAAGGAA........................ len:20 al:23
.......................................................UUGUGUAACUCCCcAA............................ len:16 al:4
.......................................................UUGcGUAACUCCCUAAGGAAGGC..................... len:23 al:4
.......................................................UUGUGUAACUCCCUAAGGAgGGC..................... len:23 al:1
.......................................................UUGUGUAACUCCCUAAGGgAGG...................... len:22 al:225
.......................................................UUGUGUAACUCCaUAA............................ len:16 al:1
.......................................................UUGUGUgACUCCCUAAGG.......................... len:18 al:4
.......................................................UUGUGUAACUCCCUAAGGAu........................ len:20 al:35
.......................................................UUGUGUAACUCCCUAAGGAAu....................... len:21 al:73
.......................................................UUGUGUAACcCCCUA............................. len:15 al:4
.......................................................UUGUGUAACcCCCUAAGGAAGG...................... len:22 al:182
.......................................................UUGUGUAACUCCCUAAGGAgG....................... len:21 al:60
.......................................................UaGUGUAACUCCCUAAGGAA........................ len:20 al:1
.......................................................UUGUGUgACUCCCUAA............................ len:16 al:24
.......................................................UUcUGUAACUCCCUAAGGAAGG...................... len:22 al:8
.......................................................UUGUGUAACUCCCUg............................. len:15 al:27
.......................................................UUGUGUAACUCCCUAAu........................... len:17 al:1
.......................................................UUGUGUAACUCCCUAAGGAAGc...................... len:22 al:717
.......................................................UcGUGUAACUCCCUAAGGAAG....................... len:21 al:6
.......................................................UUGUGUAACUCCCUAAGGAAGGuUU................... len:25 al:1
.......................................................UUGUGUAACUCCCUAAGGAAa....................... len:21 al:339
.......................................................UUGUGUAACUCCCcAAGGA......................... len:19 al:4
.......................................................UUGUGUAACUCCCUAAGGu......................... len:19 al:67
.......................................................UUGUGUAACUCCCUgAGGAA........................ len:20 al:3
.......................................................UUGUGUAACUCCaUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACcCCCUAA............................ len:16 al:4
.......................................................UUGUGUAACUCCCUAAc........................... len:17 al:1
.......................................................UUGUGUAACUCCCUAAGGA......................... len:19 al:1833
.......................................................UUGUGUAACUCCCUAcGGAAGG...................... len:22 al:10
.......................................................UUGUGUAACUCCCUAAaGAA........................ len:20 al:1
.......................................................UUGUGUAACUCCCUgA............................ len:16 al:10
.......................................................UUGUGUgACUCCCUA............................. len:15 al:40
.......................................................UUGUGgAACUCCCUAAGGAAGG...................... len:22 al:4
.......................................................UUGUGUAACUCCCUAgGGA......................... len:19 al:6
.......................................................UUGUGUAACUCCaUAAGGAA........................ len:20 al:1
.......................................................UUGaGUAACUCCCUAAGGAAGG...................... len:22 al:98
.......................................................UUGUuUAACUCCCUAAGGAAGG...................... len:22 al:10
.......................................................UUGUGUAACUCCCUAAGGAAGGuU.................... len:24 al:5
.......................................................cUGUGUAACUCCCUAA............................ len:16 al:23
.......................................................UUGUGUAAuUCCCUAAGGAAGG...................... len:22 al:29
.......................................................UUGUGUAACUCCCUAAGGAc........................ len:20 al:10
.......................................................UUGUGUAACUCCCUAAGGAcG....................... len:21 al:160
.......................................................UUGUGUAACaCCCUAAGGAAG....................... len:21 al:2
.......................................................UUGUGUAACaCCCUAAGGAAGG...................... len:22 al:37
.......................................................UUaUGUAACUCCCUAAGGAAGG...................... len:22 al:26
.......................................................UUGUGUgACUCCCUAAGGAAG....................... len:21 al:30
.......................................................UUGUaUAACUCCCUAAGGAAGG...................... len:22 al:39
.......................................................UUGcGUAACUCCCUAAGGAAG....................... len:21 al:5
.......................................................UaGUGUAACUCCCUAA............................ len:16 al:3
.......................................................aUGUGUAACUCCCUAAGGA......................... len:19 al:7
.......................................................UUGUGUAACUCCCUAAcG.......................... len:18 al:2
.......................................................UUGUGUAACUCCCUAAGGAA........................ len:20 al:1396
.......................................................UUGUGUAACUCCCUAAGGgAG....................... len:21 al:9
.......................................................UUGUGUAACUCCCaAAGGAAGG...................... len:22 al:19
.......................................................UUGUGUAACUCCCUAAGcAAGG...................... len:22 al:5
.......................................................cUGUGUAACUCCCUA............................. len:15 al:26
.......................................................UUGUcUAACUCCCUAAGGAAGG...................... len:22 al:5
.......................................................UUGUGUAACUCCCUAAGGAAGGgU.................... len:24 al:1
.......................................................aUGUGUAACUCCCUAAGG.......................... len:18 al:1
.......................................................UUGUGUAACUCCCaAA............................ len:16 al:1
.......................................................UUGUGUcACUCCCUAA............................ len:16 al:1
.......................................................UUGUGUAACUCCCUAAGGAAG....................... len:21 al:1971
.......................................................UUGUGUAACUCCCUgAGGAAG....................... len:21 al:3
.......................................................UUGUGUAACUCCCUAc............................ len:16 al:20
.......................................................UaGUGUAACUCCCUA............................. len:15 al:3
.......................................................UUGUGUAAgUCCCUAAGGAAGG...................... len:22 al:2
.......................................................UUGcGUAACUCCCUAAGGAAGG...................... len:22 al:218
.......................................................UUGUGUAACUCCCUAAGGAgGG...................... len:22 al:1343
.......................................................UUGUGUAACUCCuUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCuCUAAGGAAGG...................... len:22 al:52
.......................................................UUGUcUAACUCCCUA............................. len:15 al:1
.......................................................UUGUGUAACUCCaUAAGGAAGG...................... len:22 al:12
.......................................................UUGUGUAACUCCCUAAGGAAGaC..................... len:23 al:2
.......................................................UUGUGUAACUCCCUAu............................ len:16 al:85
.......................................................UcGUGUAACUCCCUAAGGA......................... len:19 al:8
.......................................................UUGUGUAACUCCCUAAGGAAGGCg.................... len:24 al:1
.......................................................UUGUGUgACUCCCUAAGGA......................... len:19 al:31
.......................................................UUGUGUAgCUCCCUAA............................ len:16 al:5
.......................................................UUGUGUAACUuCCUAAGGAAGG...................... len:22 al:23
.......................................................UUGUGUAAaUCCCUAAGG.......................... len:18 al:1
.......................................................UUGUGUAACUCCCUcAGGAAGG...................... len:22 al:11
.......................................................UUGUGUAACUCCCUAAGGAAGa...................... len:22 al:20440
.......................................................UUGUGcAACUCCCUA............................. len:15 al:1
.......................................................UUGUGUAAuUCCCUAAGGA......................... len:19 al:1
.......................................................aUGUGUAACUCCCUAAGGAAGGC..................... len:23 al:1
.......................................................UUGUaUAACUCCCUAA............................ len:16 al:4
.......................................................UUGUGUAACUCCCUAAGGuAG....................... len:21 al:2
.......................................................UUGUGUAACUCCCUA............................. len:15 al:1959
.......................................................UUGUGUAgCUCCCUA............................. len:15 al:12
.......................................................UUGUGUAACUCCCUAAGGAAGGa..................... len:23 al:154
.......................................................UUGUGUAgCUCCCUAAGGA......................... len:19 al:5
.......................................................UUGUGUAACUCCCUgAGGAAGG...................... len:22 al:105
.......................................................UUGUGUAcCUCCCUAAGGAAGG...................... len:22 al:7
.......................................................UUGUGUAACcCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCCUAAa........................... len:17 al:5
.......................................................UUGUGcAACUCCCUAA............................ len:16 al:3
.......................................................UUGUGUAACUCCCUAAGGc......................... len:19 al:3
.......................................................UUGUGUAACUCCCUAA............................ len:16 al:1681
.......................................................UUGUGUAACUCCCUc............................. len:15 al:6
.......................................................UUaUGUAACUCCCUAAGGA......................... len:19 al:1
.......................................................UUuUGUAACUCCCUAAGGAAGG...................... len:22 al:14
.......................................................UUGUaUAACUCCCUAAGGA......................... len:19 al:2
.......................................................UUGUGUAACUCCCUAAcGAAGG...................... len:22 al:2
.......................................................UUGUGUAACUCCCUAAGGAAGGaUU................... len:25 al:1
.......................................................UUGUGUAACUCCCcAAGGAAGG...................... len:22 al:85
.......................................................UUGUGUAuCUCCCUAAGGAAGG...................... len:22 al:18
.......................................................UUGUGUAACUCCCUAAGc.......................... len:18 al:4
.......................................................UUGUGUAgCUCCCUAAGGAAG....................... len:21 al:9
.......................................................UUGUGUAACUCCCgAAGGAAGG...................... len:22 al:9
.......................................................UcGUGUAACUCCCUAAGGAA........................ len:20 al:5
.......................................................UUGUGUAACUCCCUAAGGAAcG...................... len:22 al:755
.......................................................UUGUGUAACUCCCUgAGGA......................... len:19 al:1
.......................................................UUGUGUAACUCCCUAAGGAAGGu..................... len:23 al:263
.......................................................UaGUGUAACUCCCUAAGGA......................... len:19 al:3
.......................................................aUGUGUAACUCCCUAAGGAAG....................... len:21 al:4
.......................................................UUGUGUAACUCCCUAAGGAuG....................... len:21 al:4
.......................................................UgGUGUAACUCCCUAAGGA......................... len:19 al:2
.......................................................UUGUGUAACaCCCUAAGGAA........................ len:20 al:1
.......................................................UUGUGUAACUCCCaAAGGA......................... len:19 al:2
.......................................................UUGUGUAACgCCCUAAGGAAGG...................... len:22 al:9
.......................................................UUGUGUAACUCuCUAAGGA......................... len:19 al:1
.......................................................UUGUGUAACUCCCUAAGGAAGGaU.................... len:24 al:5
.......................................................UUGUGUAACUCCCUAuGGAA........................ len:20 al:1
.......................................................UUGUGUAACUCCCUAAGGcAG....................... len:21 al:1
.......................................................UUGUGUAACUaCCUAAGGAAGG...................... len:22 al:5
.......................................................UUGUGUAACUCCCUAAGGAAGGCa.................... len:24 al:1
.......................................................UUGUGUAACUCCCUAAGuAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCCUAAuGAA........................ len:20 al:1
.......................................................UUGUGUAACUCgCUAAGGAAGG...................... len:22 al:1
.......................................................UUGgGUAACUCCCUAAGGA......................... len:19 al:2
.......................................................UUGUGUAACUCCCUAAGGAg........................ len:20 al:32
.......................................................UUGUGUAACUCCCUAAaGAAGG...................... len:22 al:14
.......................................................UUGaGUAACUCCCUAAGGAAG....................... len:21 al:5
.......................................................UUaUGUAACUCCCUAAGGAA........................ len:20 al:2
.......................................................UUGUGUAgCUCCCUAAG........................... len:17 al:1
.......................................................UUGUGUAACUCCCUAgGGAA........................ len:20 al:4
.......................................................UUGUGUAACUCCCUAAGGAcGG...................... len:22 al:7069
.......................................................UUGUGUAACUCCCUAAGGcAGG...................... len:22 al:50
.......................................................UUGUGUAACUCCuUAAGGA......................... len:19 al:3
.......................................................UUGUGcAACUCCCUAAGGAAG....................... len:21 al:5
.......................................................UUGaGUAACUCCCUAAGGAA........................ len:20 al:6
.......................................................UUGUGUAACUCCCUuA............................ len:16 al:2
.......................................................cUGUGUAACUCCCUAAGGAAG....................... len:21 al:9
.......................................................UUGUGUAACUCCCUAAGuAAGG...................... len:22 al:11
.......................................................aUGUGUAACUCCCUAAGGAAGG...................... len:22 al:191
.......................................................UUGUGUAACUCCCUAAGGAuGG...................... len:22 al:28
.......................................................UUGUGUAACUCCCgA............................. len:15 al:14
.......................................................UUGUuUAACUCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCgUAAGGAAGG...................... len:22 al:2
.......................................................UUGUGUAACUCCCUAAuGAAGG...................... len:22 al:24
.......................................................UUGUGUAACcCCCUAAGGA......................... len:19 al:8
.......................................................UUGUGUAACUCCCUAAGGAAuG...................... len:22 al:23
.......................................................UUGUGUAACUCCCUAAG........................... len:17 al:24
.......................................................UUGUGUAACUCuCUAAGG.......................... len:18 al:1
.......................................................UUGUGUAACUCCCUAAGGAAc....................... len:21 al:64
.......................................................UUGaGUAACUCCCUAA............................ len:16 al:1
.......................................................UUGUGgAACUCCCUAAGG.......................... len:18 al:1
.......................................................UUGUGUAACcCCCUAAGGAA........................ len:20 al:2
.......................................................UUGUGUAACUCCCUAAGcA......................... len:19 al:8
.......................................................UUGUGUAACUCCCUAAGG.......................... len:18 al:139
.......................................................UUGUGUAACUCCCUAg............................ len:16 al:30
.......................................................UgGUGUAACUCCCUAAGGAAGG...................... len:22 al:3
.......................................................gUGUGUAACUCCCUA............................. len:15 al:2
.......................................................UUGUGUAACUCCuUAA............................ len:16 al:2
.......................................................UUGUGaAACUCCCUAA............................ len:16 al:2
.......................................................UUGcGUAACUCCCUAAGGAA........................ len:20 al:7
.......................................................UUGUGUgACUCCCUAAGGAAGG...................... len:22 al:552
.......................................................UUGUGaAACUCCCUAAGGAAG....................... len:21 al:1
.......................................................UUGUGUAACUCCCcAAGGAAG....................... len:21 al:3
.......................................................gUGUGUAACUCCCUAAGGAA........................ len:20 al:1
.......................................................UUGUGUAgCUCCCUAAGGAA........................ len:20 al:5
.......................................................UUGUGUAACUCCCUAAGGAAGcC..................... len:23 al:1
.......................................................UUGUGUAACUCCCUAAGGAAaG...................... len:22 al:363
.......................................................UUGaGUAACUCCCUAAGGA......................... len:19 al:2
.......................................................UUGUGUAACUaCCUAAGGAAG....................... len:21 al:1
.......................................................cUGUGUAACUCCCUAAGGA......................... len:19 al:19
.......................................................UUGUGUAACaCCCUAAGGA......................... len:19 al:2
.......................................................UUGUGUAACUCCCUAAGGAAGG...................... len:22 al:58934
.......................................................UUGgGUAACUCCCUAAGGAAGG...................... len:22 al:11
.......................................................UUGUGUAACUCCCUAgGGAAGG...................... len:22 al:126
.......................................................gUGUGUAACUCCCUAA............................ len:16 al:1
.......................................................UUGUGUAgCUCCCUAAGG.......................... len:18 al:6
.......................................................UUGUGUAACUCCuUA............................. len:15 al:1
.......................................................UUGUGUAACUCCCUuAGGAAGG...................... len:22 al:4
........................................................UGUGUAACUCCCUAAGGAAa....................... len:20 al:1
........................................................UGUGUAACUCCCUAAGGAAGa...................... len:21 al:11
........................................................UGUGUAACUCCCUAAGGAAGc...................... len:21 al:2
........................................................UGUGUAACUCCCUAA............................ len:15 al:2
........................................................UGUGUAACUCCCUAAGGAAGGa..................... len:22 al:1
........................................................UGUGUgACUCCCUAAGGAAGG...................... len:21 al:1
........................................................UGUGUAACUCCCUAAGGAgGG...................... len:21 al:2
........................................................UGUGUAACUCCCUAAGGAAG....................... len:20 al:2
........................................................UGUGUAACUCCCUAAGGAAGG...................... len:21 al:27
........................................................UGUGUAACUCCCUAAGGAcGG...................... len:21 al:3
.........................................................GUGUAACUCCCUAAGGAAGa...................... len:20 al:2
.........................................................GUGUAACUCCCUAAGGAAGG...................... len:20 al:4
.........................................................uUGUAACUCCCUAAGGAAGG...................... len:20 al:1
..........................................................UGUAACUCCCUAAGGAAGa...................... len:19 al:1
..........................................................UGaAACUCCCUAAGGAAGG...................... len:19 al:1
...........................................................GUAACUCCCUAAGGAAGa...................... len:18 al:1