Locus	Name	Chrom	Start	End	Length	Reads	DistinctSequences	FracTop	Strand	MajorRNA	MajorRNAReads	Short	Long	21	22	23	24	DicerCall	MIRNA	known_miRNAs
Pocillopora_meandrina_HIv1___Sc0000000:9091-9521	Cluster_1	Pocillopora_meandrina_HIv1___Sc0000000	9091	9521	431	11370	416	1.0	+	GGGGGUAUAGCUCAGUGGUAGA	3774	1971	3797	682	4314	189	417	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:53578-53997	Cluster_2	Pocillopora_meandrina_HIv1___Sc0000000	53578	53997	420	434	30	0.9976958525345622	+	GCCUAAGUUGCUUGGAACA	139	432	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:150243-150718	Cluster_3	Pocillopora_meandrina_HIv1___Sc0000000	150243	150718	476	2661	283	0.000751597143930853	-	UGGCUAUGAUGAAAAUGACU	327	1002	356	629	369	138	167	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:173728-174150	Cluster_4	Pocillopora_meandrina_HIv1___Sc0000000	173728	174150	423	1253	72	0.9960095770151636	+	UUUGAUUGCUGUGAUCUGGUUG	369	120	2	43	623	435	30	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:187562-188072	Cluster_5	Pocillopora_meandrina_HIv1___Sc0000000	187562	188072	511	183	34	0.453551912568306	.	AUAAAUGUCACUACAAGAAACCUGAAAUCGU	25	2	175	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:485727-486254	Cluster_6	Pocillopora_meandrina_HIv1___Sc0000000	485727	486254	528	327	147	1.0	+	GAUGGGUGUUAUUACUCCUCAGACAGAC	48	111	180	7	11	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:525310-527341	Cluster_7	Pocillopora_meandrina_HIv1___Sc0000000	525310	527341	2032	14555	3093	0.184610099622123	-	UUUUCGUCACUUUCUUCAGCCUCAGAGU	947	210	13371	53	108	310	503	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:541262-541723	Cluster_8	Pocillopora_meandrina_HIv1___Sc0000000	541262	541723	462	725	137	0.07862068965517241	-	UUGGACGAAAUUUCGAGGUUCACACUCGUU	80	0	719	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:551887-552689	Cluster_9	Pocillopora_meandrina_HIv1___Sc0000000	551887	552689	803	833	274	0.20168067226890757	.	UUCAAGGAGGAUGUAUCCACUGUCAUU	90	27	748	12	8	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:555674-556458	Cluster_10	Pocillopora_meandrina_HIv1___Sc0000000	555674	556458	785	825	198	0.07757575757575758	-	UUGGACGAAAUUUCGAGGUUCACACUCGUU	98	5	808	0	5	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:580913-581470	Cluster_11	Pocillopora_meandrina_HIv1___Sc0000000	580913	581470	558	225	98	0.8533333333333334	+	UCAAAUACAACACCAAAAGAC	24	11	162	28	1	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:591365-591939	Cluster_12	Pocillopora_meandrina_HIv1___Sc0000000	591365	591939	575	794	231	0.9584382871536524	+	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUGG	91	16	754	4	1	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:616336-616751	Cluster_13	Pocillopora_meandrina_HIv1___Sc0000000	616336	616751	416	97	33	0.8865979381443299	+	CGAUUGUGAUACUCUA	32	52	18	2	16	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:639521-640061	Cluster_14	Pocillopora_meandrina_HIv1___Sc0000000	639521	640061	541	550	140	0.8018181818181818	+	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	170	2	527	4	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:721030-721459	Cluster_15	Pocillopora_meandrina_HIv1___Sc0000000	721030	721459	430	628	68	1.0	+	UGAUGAUCGUAAUGAUUUCCAUGGGGU	132	10	589	0	1	21	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:721923-722470	Cluster_16	Pocillopora_meandrina_HIv1___Sc0000000	721923	722470	548	2959	470	1.0	+	UAGCAUACAUGUAGACCCUGGUAGAGUA	479	352	1944	82	278	190	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:727164-727725	Cluster_17	Pocillopora_meandrina_HIv1___Sc0000000	727164	727725	562	879	231	0.9977246871444824	+	GACCACAUGUUACUGAUGAGCUUAGU	144	132	538	22	53	64	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:789491-789906	Cluster_18	Pocillopora_meandrina_HIv1___Sc0000000	789491	789906	416	91	17	1.0	+	UGCGGAGUGGAGCAGU	48	85	5	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:815897-816398	Cluster_19	Pocillopora_meandrina_HIv1___Sc0000000	815897	816398	502	1678	608	0.006555423122765197	-	UACUUAUAAGCAGUAGAGGCGUU	67	727	415	179	90	171	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:818027-818120	Cluster_20	Pocillopora_meandrina_HIv1___Sc0000000	818027	818120	94	12327	317	0.9990265271355561	+	UGUUCUCUCUGCAGUAAGCAUGU	3181	912	78	205	3237	5360	2535	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:923725-924139	Cluster_21	Pocillopora_meandrina_HIv1___Sc0000000	923725	924139	415	325	19	0.012307692307692308	-	GGUUGGAUCCGGCCG	269	323	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:987729-988269	Cluster_22	Pocillopora_meandrina_HIv1___Sc0000000	987729	988269	541	584	160	0.7671232876712328	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	175	4	552	7	2	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1215302-1215757	Cluster_23	Pocillopora_meandrina_HIv1___Sc0000000	1215302	1215757	456	2606	237	0.01343054489639294	-	GUCUUUGUAGUGUAG	884	2132	429	14	13	15	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1253655-1254057	Cluster_24	Pocillopora_meandrina_HIv1___Sc0000000	1253655	1254057	403	74	51	0.972972972972973	+	UUUGAUUUGGAGUGGGGCU	5	46	13	7	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1276611-1277082	Cluster_25	Pocillopora_meandrina_HIv1___Sc0000000	1276611	1277082	472	1890	597	0.9989417989417989	+	CCAAUGGAUAAGGCAUCUGACUGCG	58	639	799	66	126	119	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1336780-1337291	Cluster_26	Pocillopora_meandrina_HIv1___Sc0000000	1336780	1337291	512	2894	561	0.0034554250172771253	-	GCCGCGAUAGCUCAG	283	1175	301	373	537	358	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1378697-1379231	Cluster_27	Pocillopora_meandrina_HIv1___Sc0000000	1378697	1379231	535	1409	462	0.0042583392476933995	-	UAAGACUUUCAUUUAGACCUGGAACAAUU	115	239	854	40	50	143	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1637504-1637919	Cluster_28	Pocillopora_meandrina_HIv1___Sc0000000	1637504	1637919	416	152	33	0.09210526315789473	-	GAAUCGGUCGUGGAUU	35	145	4	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1688897-1689394	Cluster_29	Pocillopora_meandrina_HIv1___Sc0000000	1688897	1689394	498	442	202	0.5271493212669683	.	ACAUUUAGUAAUUACAAGAACCAUGACACU	44	14	403	5	4	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1750814-1751512	Cluster_30	Pocillopora_meandrina_HIv1___Sc0000000	1750814	1751512	699	252	135	0.9246031746031746	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	26	5	234	0	4	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1752745-1753173	Cluster_31	Pocillopora_meandrina_HIv1___Sc0000000	1752745	1753173	429	247	129	0.8663967611336032	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	28	2	229	1	1	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:1868815-1869232	Cluster_32	Pocillopora_meandrina_HIv1___Sc0000000	1868815	1869232	418	363	40	0.02203856749311295	-	UCUUGUGGCUAGGGU	149	356	2	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2007021-2007452	Cluster_33	Pocillopora_meandrina_HIv1___Sc0000000	2007021	2007452	432	293	101	0.030716723549488054	-	UGUGUAAACAUUGCAACACGAUCUGACAGA	20	7	278	1	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2063456-2063972	Cluster_34	Pocillopora_meandrina_HIv1___Sc0000000	2063456	2063972	517	5937	784	0.0033687047330301497	-	AAGGAUGCCGAGAUAGCUC	731	3306	451	551	946	498	185	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2159721-2160378	Cluster_35	Pocillopora_meandrina_HIv1___Sc0000000	2159721	2160378	658	1123	309	0.07479964381121995	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	116	13	1056	2	6	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2160616-2161042	Cluster_36	Pocillopora_meandrina_HIv1___Sc0000000	2160616	2161042	427	237	133	0.12236286919831224	-	UGAGUCGAGGUUAUUCACAAUACGAGC	27	8	214	2	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2221328-2221740	Cluster_37	Pocillopora_meandrina_HIv1___Sc0000000	2221328	2221740	413	101	22	0.009900990099009901	-	UGAUCCGGCCCGGACA	33	101	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2312271-2312685	Cluster_38	Pocillopora_meandrina_HIv1___Sc0000000	2312271	2312685	415	217	26	0.0	-	CUUUCUGAGGUCGCG	114	217	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2335704-2336115	Cluster_39	Pocillopora_meandrina_HIv1___Sc0000000	2335704	2336115	412	132	92	1.0	+	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	6	76	28	9	11	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2750560-2752026	Cluster_40	Pocillopora_meandrina_HIv1___Sc0000000	2750560	2752026	1467	1780	756	0.9578651685393258	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	69	22	1651	8	31	25	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:2872019-2872110	Cluster_41	Pocillopora_meandrina_HIv1___Sc0000000	2872019	2872110	92	173	30	1.0	+	AUAGUAUUGUCGACAGGUACU	58	19	0	109	42	3	0	21	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:2959663-2960409	Cluster_42	Pocillopora_meandrina_HIv1___Sc0000000	2959663	2960409	747	1323	554	0.8087679516250945	+	UUCCAGCACAAAAGAGACAAAAGGAGUUCAA	51	34	1153	8	19	42	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3005892-3006331	Cluster_43	Pocillopora_meandrina_HIv1___Sc0000000	3005892	3006331	440	1145	181	0.028820960698689956	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	296	4	1122	4	2	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3251850-3252263	Cluster_44	Pocillopora_meandrina_HIv1___Sc0000000	3251850	3252263	414	84	25	0.9761904761904762	+	AAGUGUGCUCUUAACAG	21	83	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3308776-3309192	Cluster_45	Pocillopora_meandrina_HIv1___Sc0000000	3308776	3309192	417	238	13	0.02100840336134454	-	CUUGUGGCUAGGGUCCA	212	224	2	2	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3412071-3412488	Cluster_46	Pocillopora_meandrina_HIv1___Sc0000000	3412071	3412488	418	204	55	0.004901960784313725	-	CUUCUUAGAGGGACUGUC	22	203	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3581988-3582721	Cluster_47	Pocillopora_meandrina_HIv1___Sc0000000	3581988	3582721	734	444	214	0.6666666666666666	.	UUAUUUCUACAUAGAGUGAGCUCACAUC	68	45	328	18	10	18	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3585443-3585867	Cluster_48	Pocillopora_meandrina_HIv1___Sc0000000	3585443	3585867	425	116	58	1.0	+	UUUGAAAGGAUGCAUUAACGAUAGACGU	23	0	116	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3603652-3604077	Cluster_49	Pocillopora_meandrina_HIv1___Sc0000000	3603652	3604077	426	197	29	0.025380710659898477	-	UAAGACAUUGGCAUACUUGGCAUACA	137	1	193	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3628199-3628623	Cluster_50	Pocillopora_meandrina_HIv1___Sc0000000	3628199	3628623	425	79	13	0.0	-	UGAACUACUGCUCGUACUCUAGAUACG	35	0	79	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3691324-3691932	Cluster_51	Pocillopora_meandrina_HIv1___Sc0000000	3691324	3691932	609	8092	1183	0.00012357884330202668	-	CACUCUGAGAAGUGGAGAGACAGUU	1548	716	5134	283	298	426	1235	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3821020-3821448	Cluster_52	Pocillopora_meandrina_HIv1___Sc0000000	3821020	3821448	429	202	111	0.009900990099009901	-	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	20	93	76	16	9	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3822514-3823003	Cluster_53	Pocillopora_meandrina_HIv1___Sc0000000	3822514	3823003	490	243	142	0.024691358024691357	-	AUGGCAAGUUCCCCGCAGCUCAGUGGGUAGA	24	85	105	27	10	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3848323-3848809	Cluster_54	Pocillopora_meandrina_HIv1___Sc0000000	3848323	3848809	487	9730	677	0.00020554984583761563	-	AUACUGUGAUGAAGAAAAGGACUCCCU	1412	813	5652	497	594	1522	652	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3848821-3849296	Cluster_55	Pocillopora_meandrina_HIv1___Sc0000000	3848821	3849296	476	277	181	0.0	-	GAUGACAACAAGAAACUUGGAGAA	9	81	98	29	24	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3849326-3849741	Cluster_56	Pocillopora_meandrina_HIv1___Sc0000000	3849326	3849741	416	204	136	0.014705882352941176	-	GUAUGUUAAGCUUGUUGAGGCCCUGU	11	75	78	21	10	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3908371-3908786	Cluster_57	Pocillopora_meandrina_HIv1___Sc0000000	3908371	3908786	416	116	17	0.9827586206896551	+	CCGGGAAGGAAUCGGA	68	116	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:3911700-3912114	Cluster_58	Pocillopora_meandrina_HIv1___Sc0000000	3911700	3912114	415	165	4	1.0	+	GUAGUCGUGGCCGAA	140	165	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4077445-4077859	Cluster_59	Pocillopora_meandrina_HIv1___Sc0000000	4077445	4077859	415	83	11	0.024096385542168676	-	GGGGGACUAACUCAG	45	82	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4241544-4242078	Cluster_60	Pocillopora_meandrina_HIv1___Sc0000000	4241544	4242078	535	2804	456	1.0	+	CCUGGGAAAUGGAAUCCAACAGAA	820	573	1045	149	53	71	913	N	N	mmu-miR-466i-5p;mmu-miR-466i-5p;mmu-miR-466i-5p;mmu-miR-466i-5p
Pocillopora_meandrina_HIv1___Sc0000000:4422273-4423231	Cluster_61	Pocillopora_meandrina_HIv1___Sc0000000	4422273	4423231	959	969	381	0.48297213622291024	.	UCACACUUUUGUCUCGCAAGUCGUUGGCG	87	57	784	3	15	59	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4423706-4424118	Cluster_62	Pocillopora_meandrina_HIv1___Sc0000000	4423706	4424118	413	137	66	0.5401459854014599	.	UUAUAAGGAUCUUAAGGCGAAUAAAGCA	30	12	49	7	11	38	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4429481-4429904	Cluster_63	Pocillopora_meandrina_HIv1___Sc0000000	4429481	4429904	424	183	78	0.9672131147540983	+	UCAAAAGCUGCCGAUAAAUCUAAA	35	2	134	3	1	2	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4429917-4430341	Cluster_64	Pocillopora_meandrina_HIv1___Sc0000000	4429917	4430341	425	133	75	0.9323308270676691	+	UCAGACUAGCAACAUGAUCUUCGGUGA	16	0	123	2	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4430717-4431143	Cluster_65	Pocillopora_meandrina_HIv1___Sc0000000	4430717	4431143	427	424	128	0.9504716981132075	+	UGUACAAGGUCGAAAGAAUCCAGGAUA	171	3	396	1	1	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4431213-4432144	Cluster_66	Pocillopora_meandrina_HIv1___Sc0000000	4431213	4432144	932	993	331	0.9577039274924471	+	UAAUGACUUCAGAGUAGACAGAGACGGU	84	9	965	3	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4528180-4528608	Cluster_67	Pocillopora_meandrina_HIv1___Sc0000000	4528180	4528608	429	141	39	0.03546099290780142	-	UCUAUGAUCUUAUAAUGCGACAGUAUGAUU	33	3	137	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4531785-4532259	Cluster_68	Pocillopora_meandrina_HIv1___Sc0000000	4531785	4532259	475	1160	350	0.0017241379310344827	-	CCUUAGUGAUGAUAGAAGAUGCCGC	45	265	493	97	101	92	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4532300-4532706	Cluster_69	Pocillopora_meandrina_HIv1___Sc0000000	4532300	4532706	407	161	115	0.024844720496894408	-	CAAGAGUGAAACUGGAUGGUC	4	57	44	17	18	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4534325-4534799	Cluster_70	Pocillopora_meandrina_HIv1___Sc0000000	4534325	4534799	475	4383	671	0.0006844626967830253	-	AAAGUUUGAUUGAGAUGACAAAUAUUUCUG	313	604	2809	196	198	221	355	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4561521-4561940	Cluster_71	Pocillopora_meandrina_HIv1___Sc0000000	4561521	4561940	420	160	62	0.00625	-	GUUCCGGGGAACUUGCCGUU	33	82	1	33	28	12	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4565452-4566337	Cluster_72	Pocillopora_meandrina_HIv1___Sc0000000	4565452	4566337	886	666	295	0.09309309309309309	-	UUAUAGCAAACAAAUACAUCAUCCUGGA	53	7	611	3	11	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4595761-4596188	Cluster_73	Pocillopora_meandrina_HIv1___Sc0000000	4595761	4596188	428	217	121	0.7188940092165899	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	12	3	204	0	0	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4616213-4616622	Cluster_74	Pocillopora_meandrina_HIv1___Sc0000000	4616213	4616622	410	157	72	0.5095541401273885	.	UCGAUUCCACCGAAAGAAAUAACCUGUGA	22	19	123	4	4	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4754952-4755436	Cluster_75	Pocillopora_meandrina_HIv1___Sc0000000	4754952	4755436	485	40033	315	0.0001248969600079934	-	GUAGUCGUGGCCGAGUGG	12914	39595	59	129	53	84	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:4905179-4905809	Cluster_76	Pocillopora_meandrina_HIv1___Sc0000000	4905179	4905809	631	247	143	0.6923076923076923	.	UGCAAUUGCGUGAUUUAAGUAAAAUGUUC	14	19	177	7	3	14	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5011888-5012317	Cluster_77	Pocillopora_meandrina_HIv1___Sc0000000	5011888	5012317	430	247	41	0.9919028340080972	+	UGAUCAAUUUGUGAAUGUCUGCACACCACU	85	1	244	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5114054-5114478	Cluster_78	Pocillopora_meandrina_HIv1___Sc0000000	5114054	5114478	425	239	121	0.9707112970711297	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	27	1	229	0	4	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5114800-5115279	Cluster_79	Pocillopora_meandrina_HIv1___Sc0000000	5114800	5115279	480	350	127	0.92	+	UCCAAUCACACACAGUUCUCCUGCGGC	78	1	328	0	3	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5115363-5116268	Cluster_80	Pocillopora_meandrina_HIv1___Sc0000000	5115363	5116268	906	2246	415	0.9643811219946572	+	UAGGCAUUUGUCAGCAUUGAGAGUUAAG	316	21	2154	4	8	22	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5116660-5117931	Cluster_81	Pocillopora_meandrina_HIv1___Sc0000000	5116660	5117931	1272	1196	479	0.9280936454849499	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	90	10	1145	5	3	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5237977-5238405	Cluster_82	Pocillopora_meandrina_HIv1___Sc0000000	5237977	5238405	429	393	41	0.002544529262086514	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	296	0	389	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5304149-5304689	Cluster_83	Pocillopora_meandrina_HIv1___Sc0000000	5304149	5304689	541	1511	477	1.0	+	GUGCCUUGAAACUAUCUCUACUGUUCA	229	424	805	67	90	46	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5624826-5625249	Cluster_84	Pocillopora_meandrina_HIv1___Sc0000000	5624826	5625249	424	130	15	1.0	+	UUUGAACUCCUAAGAUCUGAUUGU	82	0	3	0	2	2	123	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:5724791-5725218	Cluster_85	Pocillopora_meandrina_HIv1___Sc0000000	5724791	5725218	428	180	68	0.011111111111111112	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	26	3	168	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6035690-6037539	Cluster_86	Pocillopora_meandrina_HIv1___Sc0000000	6035690	6037539	1850	17969	2730	0.09894818854694196	-	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3106	299	15889	198	84	229	1270	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6038529-6040210	Cluster_87	Pocillopora_meandrina_HIv1___Sc0000000	6038529	6040210	1682	2070	845	0.8154589371980676	+	UCUAACGCGUUUGUCUGACAUCCCUUU	135	43	1828	13	42	40	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6054442-6055284	Cluster_88	Pocillopora_meandrina_HIv1___Sc0000000	6054442	6055284	843	2320	241	0.9935344827586207	+	UCCUCUUGGUAAGACAUAGUUCUGUAAACUU	583	8	2299	1	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6072268-6072713	Cluster_89	Pocillopora_meandrina_HIv1___Sc0000000	6072268	6072713	446	9794	984	0.9964263835001022	+	AUGUGAUUUCUGCCCAGUGCUCU	282	4821	1370	1036	879	1084	604	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6175141-6175560	Cluster_90	Pocillopora_meandrina_HIv1___Sc0000000	6175141	6175560	420	1030	63	1.0	+	CUCUGUCUCUGUCCGU	219	1030	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6176478-6176897	Cluster_91	Pocillopora_meandrina_HIv1___Sc0000000	6176478	6176897	420	106	6	0.0	-	UGAAAAUCUUUGCUCUGACG	52	54	0	46	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6300017-6300437	Cluster_92	Pocillopora_meandrina_HIv1___Sc0000000	6300017	6300437	421	274	87	0.6788321167883211	.	AUCGAUCGCGUUUCUCUUGC	76	218	4	48	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6432068-6432496	Cluster_93	Pocillopora_meandrina_HIv1___Sc0000000	6432068	6432496	429	1125	151	0.9991111111111111	+	UCAGCUCUUUCUAACUCUGCAAUUUGAG	270	1	1115	2	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6432523-6433168	Cluster_94	Pocillopora_meandrina_HIv1___Sc0000000	6432523	6433168	646	768	300	0.87890625	+	UGAAAUACUUGUUCUUUUCCCUGGUUUGCC	88	9	706	8	8	9	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6523200-6523620	Cluster_95	Pocillopora_meandrina_HIv1___Sc0000000	6523200	6523620	421	82	25	0.9390243902439024	+	UGCGACAAACGAAGAGUAGAAAGUUUCUAC	41	6	67	3	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6579795-6580209	Cluster_96	Pocillopora_meandrina_HIv1___Sc0000000	6579795	6580209	415	90	10	0.0	-	GGAUCGGCCGUGGAUU	42	90	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6650162-6650578	Cluster_97	Pocillopora_meandrina_HIv1___Sc0000000	6650162	6650578	417	210	16	0.9904761904761905	+	GCCGGUCGUUGGGGCGA	157	209	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6755647-6756061	Cluster_98	Pocillopora_meandrina_HIv1___Sc0000000	6755647	6756061	415	93	14	0.978494623655914	+	GUGGAAGGUAGGUCC	76	84	6	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6781587-6782077	Cluster_99	Pocillopora_meandrina_HIv1___Sc0000000	6781587	6782077	491	557	325	0.9910233393177738	+	CUUCGUUGAGAAUAGACGCCUGA	9	180	195	53	48	43	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6784342-6785024	Cluster_100	Pocillopora_meandrina_HIv1___Sc0000000	6784342	6785024	683	1713	753	0.9988324576765908	+	GAAGAGAAAAAGAACUCGUUGCU	104	580	449	208	118	268	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6785838-6786298	Cluster_101	Pocillopora_meandrina_HIv1___Sc0000000	6785838	6786298	461	338	167	1.0	+	CUUGAAGAAAGACUGGUCUCCA	26	168	51	22	61	15	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6786580-6787211	Cluster_102	Pocillopora_meandrina_HIv1___Sc0000000	6786580	6787211	632	1088	665	0.9990808823529411	+	GACGACAACGAGCUCGGU	16	329	447	92	62	72	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6820854-6821271	Cluster_103	Pocillopora_meandrina_HIv1___Sc0000000	6820854	6821271	418	194	144	0.9948453608247423	+	GAUGUGCGACGACCUCUGAGGAACA	6	81	50	23	18	17	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6863949-6864369	Cluster_104	Pocillopora_meandrina_HIv1___Sc0000000	6863949	6864369	421	207	133	0.9951690821256038	+	CUUGUGUCAACUAAACUCCAACA	9	58	80	21	13	30	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6905074-6905503	Cluster_105	Pocillopora_meandrina_HIv1___Sc0000000	6905074	6905503	430	457	114	0.04157549234135667	-	AUCUUCUGAAUCAAGAAAAAAGAGGCUGG	114	4	434	0	6	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:6905904-6906371	Cluster_106	Pocillopora_meandrina_HIv1___Sc0000000	6905904	6906371	468	3412	165	0.0029308323563892145	-	GAUCCAACAAGAACAAUAUGUGCUGACUA	1107	2	3403	1	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7028932-7029345	Cluster_107	Pocillopora_meandrina_HIv1___Sc0000000	7028932	7029345	414	104	31	1.0	+	UGCUGCCGGUCGUGGG	27	90	8	2	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7029852-7030270	Cluster_108	Pocillopora_meandrina_HIv1___Sc0000000	7029852	7030270	419	4671	150	0.0017126953543138515	-	CCUCUACUUGACCUCAUU	1290	4671	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7039343-7040274	Cluster_109	Pocillopora_meandrina_HIv1___Sc0000000	7039343	7040274	932	3875	682	0.00025806451612903227	-	CAGGGGCCAUCUGAUGGAU	264	1537	1705	135	162	155	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7040841-7041265	Cluster_110	Pocillopora_meandrina_HIv1___Sc0000000	7040841	7041265	425	244	107	0.00819672131147541	-	UCAAGUCUGAGCAUG	15	72	97	8	6	32	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7041283-7041776	Cluster_111	Pocillopora_meandrina_HIv1___Sc0000000	7041283	7041776	494	6749	425	0.000296340198547933	-	GCUGGAUGAUGAGACU	3481	4857	948	193	215	276	260	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7041807-7042290	Cluster_112	Pocillopora_meandrina_HIv1___Sc0000000	7041807	7042290	484	3309	443	0.0	-	CUGAAUGAAAACAGAGUCUGAGCAGU	430	1035	1222	147	259	250	396	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7042332-7042805	Cluster_113	Pocillopora_meandrina_HIv1___Sc0000000	7042332	7042805	474	651	148	0.004608294930875576	-	UCUUUGUCUGACCAGU	29	318	258	15	21	8	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7045245-7045661	Cluster_114	Pocillopora_meandrina_HIv1___Sc0000000	7045245	7045661	417	449	11	0.0	-	ACUUGAAGCGGUUGGGU	245	448	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7100067-7100477	Cluster_115	Pocillopora_meandrina_HIv1___Sc0000000	7100067	7100477	411	316	228	0.9873417721518988	+	GUGGACUGAGCUUAAAUAGU	13	112	90	30	26	23	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7205683-7206107	Cluster_116	Pocillopora_meandrina_HIv1___Sc0000000	7205683	7206107	425	1004	73	1.0	+	UUGCGUUGCACAUGUGAACUAGGC	277	28	82	69	53	358	414	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7584506-7585242	Cluster_117	Pocillopora_meandrina_HIv1___Sc0000000	7584506	7585242	737	3903	583	0.9836023571611581	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	759	19	3827	2	6	13	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7586367-7586860	Cluster_118	Pocillopora_meandrina_HIv1___Sc0000000	7586367	7586860	494	545	256	0.744954128440367	.	UGAAUCCACCACACUUGAAUUUAGACCCA	36	11	483	3	9	7	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7587279-7588109	Cluster_119	Pocillopora_meandrina_HIv1___Sc0000000	7587279	7588109	831	414	230	0.9323671497584541	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	22	2	392	1	1	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7588484-7588910	Cluster_120	Pocillopora_meandrina_HIv1___Sc0000000	7588484	7588910	427	303	135	0.9273927392739274	+	UCCAAUCACACACAGUUCUCCUGCGGC	57	1	286	2	0	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7588994-7589420	Cluster_121	Pocillopora_meandrina_HIv1___Sc0000000	7588994	7589420	427	118	47	0.9067796610169492	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	45	0	111	0	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7590291-7592205	Cluster_122	Pocillopora_meandrina_HIv1___Sc0000000	7590291	7592205	1915	3370	1135	0.8750741839762611	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	93	32	3148	13	25	43	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7592666-7593548	Cluster_123	Pocillopora_meandrina_HIv1___Sc0000000	7592666	7593548	883	4570	759	0.8483588621444201	+	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	608	22	4344	41	9	60	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7593750-7594799	Cluster_124	Pocillopora_meandrina_HIv1___Sc0000000	7593750	7594799	1050	4850	1085	0.9162886597938145	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	456	82	4517	19	27	75	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7594848-7595397	Cluster_125	Pocillopora_meandrina_HIv1___Sc0000000	7594848	7595397	550	4243	599	0.5950978081546076	.	ACAAGACAGAAUUCCAGCUGAUACAGA	482	50	3911	9	41	75	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7596727-7597157	Cluster_126	Pocillopora_meandrina_HIv1___Sc0000000	7596727	7597157	431	904	100	0.011061946902654867	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	532	3	884	1	2	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7598683-7600443	Cluster_127	Pocillopora_meandrina_HIv1___Sc0000000	7598683	7600443	1761	2190	748	0.22876712328767124	.	UGUUCUAAUUUGAAAAUCUGCUUCUGUA	86	31	2017	5	10	44	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7600922-7601349	Cluster_128	Pocillopora_meandrina_HIv1___Sc0000000	7600922	7601349	428	163	71	0.006134969325153374	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	33	4	154	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7601405-7602137	Cluster_129	Pocillopora_meandrina_HIv1___Sc0000000	7601405	7602137	733	1103	329	0.06980961015412511	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	118	8	1045	2	5	29	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7656753-7658490	Cluster_130	Pocillopora_meandrina_HIv1___Sc0000000	7656753	7658490	1738	2751	1120	0.048709560159941837	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	93	21	2616	10	21	40	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7697508-7697937	Cluster_131	Pocillopora_meandrina_HIv1___Sc0000000	7697508	7697937	430	348	33	1.0	+	UAGAGUGUCAAACCACGAUGGAUGAUGAUC	194	2	336	0	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:7920515-7920932	Cluster_132	Pocillopora_meandrina_HIv1___Sc0000000	7920515	7920932	418	1711	103	0.005260081823495032	-	AGCUGUGACCCUCGGU	290	1707	2	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8103238-8103666	Cluster_133	Pocillopora_meandrina_HIv1___Sc0000000	8103238	8103666	429	268	38	0.9925373134328358	+	AUAUUUACGACGAGGAGGAACGAUUUGAA	104	7	259	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8155944-8156371	Cluster_134	Pocillopora_meandrina_HIv1___Sc0000000	8155944	8156371	428	86	18	1.0	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	29	0	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8310086-8310514	Cluster_135	Pocillopora_meandrina_HIv1___Sc0000000	8310086	8310514	429	178	47	0.011235955056179775	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	70	0	175	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8311015-8312237	Cluster_136	Pocillopora_meandrina_HIv1___Sc0000000	8311015	8312237	1223	1504	290	0.09707446808510638	-	UCUAUCCCACCUGUAAUGAAAAAAUCUUUG	402	23	1440	10	2	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8426708-8427191	Cluster_137	Pocillopora_meandrina_HIv1___Sc0000000	8426708	8427191	484	395	171	0.0	-	UGUGUAGUAAACGCCAGAAACAUGA	20	115	126	41	28	35	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8427562-8428099	Cluster_138	Pocillopora_meandrina_HIv1___Sc0000000	8427562	8428099	538	850	296	0.002352941176470588	-	UCUCACCUUGAAACUGGAAUGGCAAGCUU	154	154	527	31	24	50	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8453408-8453822	Cluster_139	Pocillopora_meandrina_HIv1___Sc0000000	8453408	8453822	415	112	5	0.0	-	GUCUGGAGUCUCGGU	86	111	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8499615-8500030	Cluster_140	Pocillopora_meandrina_HIv1___Sc0000000	8499615	8500030	416	100	13	1.0	+	AGUGUGCUCUUAACCA	66	97	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8608677-8609097	Cluster_141	Pocillopora_meandrina_HIv1___Sc0000000	8608677	8609097	421	398	76	0.9974874371859297	+	AAGAAAGAAGACCCUGGGAAU	100	218	6	149	12	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8611591-8612003	Cluster_142	Pocillopora_meandrina_HIv1___Sc0000000	8611591	8612003	413	121	82	0.9917355371900827	+	UUUAAUGCUGUGUGAACAAGGA	5	44	39	4	11	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8734505-8734916	Cluster_143	Pocillopora_meandrina_HIv1___Sc0000000	8734505	8734916	412	237	169	0.012658227848101266	-	CCUCAAGGACGUGCAGGAU	7	93	94	15	13	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8743608-8744021	Cluster_144	Pocillopora_meandrina_HIv1___Sc0000000	8743608	8744021	414	308	206	0.04220779220779221	-	CGAUCUACACUCUUU	10	89	138	23	20	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:8940693-8941180	Cluster_145	Pocillopora_meandrina_HIv1___Sc0000000	8940693	8941180	488	2022	307	0.19584569732937684	-	UCGACAACUUUCAGCCACAAAUCGUGCA	427	142	1708	26	18	98	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9094812-9095227	Cluster_146	Pocillopora_meandrina_HIv1___Sc0000000	9094812	9095227	416	516	30	0.9961240310077519	+	AGUGCGCUCUUAACU	302	516	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9171916-9172332	Cluster_147	Pocillopora_meandrina_HIv1___Sc0000000	9171916	9172332	417	121	35	0.0	-	AACUGUGACCCUCGGGUA	29	108	6	4	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9256539-9256969	Cluster_148	Pocillopora_meandrina_HIv1___Sc0000000	9256539	9256969	431	612	117	0.06372549019607843	-	UUAACCGUUAUAGUUUUGACUUGAAUAU	115	4	525	3	43	2	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9257154-9257837	Cluster_149	Pocillopora_meandrina_HIv1___Sc0000000	9257154	9257837	684	4795	431	0.02794577685088634	-	CUGUGAACGAUGCCCUAGAUGUGGA	713	1184	2899	39	224	257	192	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9265055-9265482	Cluster_150	Pocillopora_meandrina_HIv1___Sc0000000	9265055	9265482	428	298	70	0.9463087248322147	+	UAUGAUAUCACUGUGGAGCGAGG	78	10	130	9	4	112	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9279901-9280374	Cluster_151	Pocillopora_meandrina_HIv1___Sc0000000	9279901	9280374	474	532	162	0.9962406015037594	+	UUCCAAUGAUGAGGCAAAUCCAACUCU	63	89	386	15	12	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9284299-9284771	Cluster_152	Pocillopora_meandrina_HIv1___Sc0000000	9284299	9284771	473	564	173	0.9929078014184397	+	UUUCAGUGAUGAGUCAAAUCCAACUCCUAUU	68	85	355	23	52	25	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9285767-9286194	Cluster_153	Pocillopora_meandrina_HIv1___Sc0000000	9285767	9286194	428	310	60	1.0	+	GGAAUAAUAAUCGUGAUAACUGAGGAAU	81	97	183	7	6	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9286599-9287030	Cluster_154	Pocillopora_meandrina_HIv1___Sc0000000	9286599	9287030	432	896	199	0.9977678571428571	+	GAAACUGUAACUGACUGAGGAAA	132	241	302	73	79	161	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9425068-9425482	Cluster_155	Pocillopora_meandrina_HIv1___Sc0000000	9425068	9425482	415	118	20	0.8813559322033898	+	UCGGGCUGAGACUUA	73	106	9	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9440858-9441690	Cluster_156	Pocillopora_meandrina_HIv1___Sc0000000	9440858	9441690	833	153121	5312	0.9999346921715506	+	UCCUUCCGGCCGGUCGUCGAC	10705	114328	5896	20292	6922	3712	1971	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9460512-9460942	Cluster_157	Pocillopora_meandrina_HIv1___Sc0000000	9460512	9460942	431	873	166	1.0	+	AACGAAAGUAAUGAGAUGGAGCUGAUA	225	7	850	3	4	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9465183-9465611	Cluster_158	Pocillopora_meandrina_HIv1___Sc0000000	9465183	9465611	429	603	66	0.9469320066334992	+	GGGGUGGACACUGUUUCGGAGAAGACUGC	138	63	502	3	28	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9797403-9798674	Cluster_159	Pocillopora_meandrina_HIv1___Sc0000000	9797403	9798674	1272	3410	681	0.10586510263929619	-	UGCGUGUAGAGGUAACUAAAGUCCCUUU	385	160	3025	21	30	90	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9799673-9800082	Cluster_160	Pocillopora_meandrina_HIv1___Sc0000000	9799673	9800082	410	101	33	0.1782178217821782	-	UGUUACAAAACCAUUAGAACUAUCAGUU	26	0	89	2	2	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9800682-9801089	Cluster_161	Pocillopora_meandrina_HIv1___Sc0000000	9800682	9801089	408	96	30	0.20833333333333334	.	UGUGAAUCAAUGGCUGAACUUUCCUUAUA	24	0	90	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9803056-9803772	Cluster_162	Pocillopora_meandrina_HIv1___Sc0000000	9803056	9803772	717	340	131	0.058823529411764705	-	UCACUGAUGUCGGAUGUCUGAGAUGCAUC	63	6	326	2	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9828155-9828582	Cluster_163	Pocillopora_meandrina_HIv1___Sc0000000	9828155	9828582	428	140	30	0.04285714285714286	-	UUGAUCUCUAUGGUUUGAAAGGUUAUGG	51	6	129	3	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9842836-9843262	Cluster_164	Pocillopora_meandrina_HIv1___Sc0000000	9842836	9843262	427	128	35	0.0	-	UCUAAGACAAUAAUUGGUACUGCAACA	30	1	127	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9853689-9855999	Cluster_165	Pocillopora_meandrina_HIv1___Sc0000000	9853689	9855999	2311	16281	2150	0.01424973895952337	-	UAAUUCUUCCUUGAGCUGUGUUUUAAGA	907	94	15816	29	121	76	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9856063-9856639	Cluster_166	Pocillopora_meandrina_HIv1___Sc0000000	9856063	9856639	577	1195	356	0.07112970711297072	-	UGUUUCUGCGGUACGUGUCACCAUUGGC	102	73	1051	7	4	18	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9857383-9857809	Cluster_167	Pocillopora_meandrina_HIv1___Sc0000000	9857383	9857809	427	112	50	0.08928571428571429	-	UGUAAUCUUCCGGUUGGUCUAGUAAACC	15	5	100	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9878202-9878692	Cluster_168	Pocillopora_meandrina_HIv1___Sc0000000	9878202	9878692	491	1217	194	0.01725554642563681	-	UCCGUUCUGUAAUUGUUUCGAAUGCCUUC	158	6	1181	0	1	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9884241-9884668	Cluster_169	Pocillopora_meandrina_HIv1___Sc0000000	9884241	9884668	428	156	48	0.0	-	UGGGAAUAUCUGGUUCUUCGUGAAGAUC	45	2	106	0	0	44	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9887131-9887538	Cluster_170	Pocillopora_meandrina_HIv1___Sc0000000	9887131	9887538	408	204	93	0.014705882352941176	-	UAAUAUGUGAUGAACUUA	36	65	136	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9889894-9890324	Cluster_171	Pocillopora_meandrina_HIv1___Sc0000000	9889894	9890324	431	117	10	0.05982905982905983	-	UCAGCUCCAUAUCUUGUUUAACAUCUUAAAC	76	0	114	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9898243-9898662	Cluster_172	Pocillopora_meandrina_HIv1___Sc0000000	9898243	9898662	420	175	83	0.16	-	UUCGCGUCUGAAGCUGUUAG	28	79	13	18	31	32	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9904284-9904712	Cluster_173	Pocillopora_meandrina_HIv1___Sc0000000	9904284	9904712	429	389	57	0.9897172236503856	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	279	2	383	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9912448-9913768	Cluster_174	Pocillopora_meandrina_HIv1___Sc0000000	9912448	9913768	1321	1402	565	0.8580599144079886	+	UGCACUCUUCAUAGAUCCCUAAAGGAACGG	52	18	1197	11	22	18	136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9924478-9924909	Cluster_175	Pocillopora_meandrina_HIv1___Sc0000000	9924478	9924909	432	383	143	0.07049608355091384	-	UUGGUGUGUUCAAGUAUCUUUGAUUCUGA	38	3	365	2	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9931069-9932750	Cluster_176	Pocillopora_meandrina_HIv1___Sc0000000	9931069	9932750	1682	2074	827	0.18032786885245902	-	UCUAACGCGUUUGUCUGACAUCCCUUU	139	33	1883	14	39	31	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:9933750-9935597	Cluster_177	Pocillopora_meandrina_HIv1___Sc0000000	9933750	9935597	1848	18522	2831	0.9001187776697981	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	2998	338	16345	192	94	281	1272	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10012374-10012789	Cluster_178	Pocillopora_meandrina_HIv1___Sc0000000	10012374	10012789	416	88	6	0.011363636363636364	-	AUCCCUCCGGUGCCUCAA	44	88	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10052622-10053049	Cluster_179	Pocillopora_meandrina_HIv1___Sc0000000	10052622	10053049	428	405	89	0.1037037037037037	-	UGUAAUCGCAUGUAGUUGCUUCUGUCUC	95	41	330	14	2	18	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10128424-10128839	Cluster_180	Pocillopora_meandrina_HIv1___Sc0000000	10128424	10128839	416	81	8	0.024691358024691357	-	AUGGUCGAGGUGAGGG	58	81	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10181669-10182095	Cluster_181	Pocillopora_meandrina_HIv1___Sc0000000	10181669	10182095	427	154	41	0.012987012987012988	-	UGGGUUGACUGAAUUUGUGAGGAAGCUG	24	0	141	0	0	12	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10361747-10362173	Cluster_182	Pocillopora_meandrina_HIv1___Sc0000000	10361747	10362173	427	159	62	0.9559748427672956	+	UACAAACAACAGAACGUUCGAACGGCU	28	8	149	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10377202-10381489	Cluster_183	Pocillopora_meandrina_HIv1___Sc0000000	10377202	10381489	4288	12373	3755	0.926452760042027	+	UGACUCUUCAAUCUCUGAAACGACUGCUC	515	170	11431	51	67	243	411	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10424158-10424581	Cluster_184	Pocillopora_meandrina_HIv1___Sc0000000	10424158	10424581	424	117	14	1.0	+	UUAACUGGUAGUCAUGACGUCUCC	47	9	3	3	0	4	98	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10532184-10532625	Cluster_185	Pocillopora_meandrina_HIv1___Sc0000000	10532184	10532625	442	354	164	0.3785310734463277	.	UCGUAGAAAAUUUAGAAGGAGUUGAAGUU	21	5	296	2	4	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10532826-10533250	Cluster_186	Pocillopora_meandrina_HIv1___Sc0000000	10532826	10533250	425	138	80	0.12318840579710146	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	9	4	120	1	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10534043-10534763	Cluster_187	Pocillopora_meandrina_HIv1___Sc0000000	10534043	10534763	721	295	181	0.07796610169491526	-	UCUCUCUGUUUUGGUCUCGCCAUGGAAC	14	0	281	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10540694-10541123	Cluster_188	Pocillopora_meandrina_HIv1___Sc0000000	10540694	10541123	430	88	21	0.9886363636363636	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	1	86	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10543792-10544200	Cluster_189	Pocillopora_meandrina_HIv1___Sc0000000	10543792	10544200	409	203	128	0.8768472906403941	+	UACUGAUAGUGAAACUGCUCCUUGAACCUC	8	5	194	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10544222-10544652	Cluster_190	Pocillopora_meandrina_HIv1___Sc0000000	10544222	10544652	431	323	157	0.9504643962848297	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	17	6	293	2	0	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10553046-10553473	Cluster_191	Pocillopora_meandrina_HIv1___Sc0000000	10553046	10553473	428	165	36	0.006060606060606061	-	UGGGUUGACUGAAUUUGUGAGGAAGCUGA	29	3	147	1	0	14	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10685159-10685836	Cluster_192	Pocillopora_meandrina_HIv1___Sc0000000	10685159	10685836	678	749	186	0.010680907877169559	-	UGUACUGAACUCUACCAGCGAA	214	25	474	10	219	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10686623-10687051	Cluster_193	Pocillopora_meandrina_HIv1___Sc0000000	10686623	10687051	429	343	74	0.9183673469387755	+	CCGUGUCUUAAGAAACAAAGUUGU	90	3	181	0	2	17	140	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10700190-10700605	Cluster_194	Pocillopora_meandrina_HIv1___Sc0000000	10700190	10700605	416	791	35	0.0	-	CCAUUAGCGAGGACU	237	791	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10707707-10708135	Cluster_195	Pocillopora_meandrina_HIv1___Sc0000000	10707707	10708135	429	278	66	0.02158273381294964	-	UCUAAUGCAGUGGCACAGAACCUCGGGGA	68	2	269	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10714506-10714951	Cluster_196	Pocillopora_meandrina_HIv1___Sc0000000	10714506	10714951	446	540	169	0.03333333333333333	-	CGGACCUCAGAUCAG	118	265	270	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10734393-10734814	Cluster_197	Pocillopora_meandrina_HIv1___Sc0000000	10734393	10734814	422	74	19	1.0	+	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	33	0	70	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10786268-10788448	Cluster_198	Pocillopora_meandrina_HIv1___Sc0000000	10786268	10788448	2181	4018	1220	0.9698855151816824	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	122	69	3677	39	25	100	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10789452-10790494	Cluster_199	Pocillopora_meandrina_HIv1___Sc0000000	10789452	10790494	1043	862	397	0.95707656612529	+	UAACAUCUCUCUUUCCGACUUUAACAGC	56	5	827	8	2	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10790631-10792237	Cluster_200	Pocillopora_meandrina_HIv1___Sc0000000	10790631	10792237	1607	1583	748	0.8900821225521163	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	95	18	1444	12	13	12	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10804976-10805394	Cluster_201	Pocillopora_meandrina_HIv1___Sc0000000	10804976	10805394	419	106	57	0.9905660377358491	+	UCAUUAGUCUGGACAUGCCCUGACAUCUCC	15	1	103	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10806850-10808466	Cluster_202	Pocillopora_meandrina_HIv1___Sc0000000	10806850	10808466	1617	4191	1042	0.8174659985683608	+	UGUGACUGUUAAAGAUACCUAGGAGUG	337	56	3654	16	20	146	299	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10811916-10812348	Cluster_203	Pocillopora_meandrina_HIv1___Sc0000000	10811916	10812348	433	335	162	0.573134328358209	.	AUACACUAUAGGCGGUGACAAGCAACCAAC	20	4	306	0	2	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10812968-10813462	Cluster_204	Pocillopora_meandrina_HIv1___Sc0000000	10812968	10813462	495	5874	329	0.9942117807286347	+	UGAGACGAAACCCGACUACAGAAUAGCU	1521	9	5678	4	11	7	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10856559-10857207	Cluster_205	Pocillopora_meandrina_HIv1___Sc0000000	10856559	10857207	649	1262	223	0.794770206022187	.	UGCAUGACAAUUUUGGAGGAGAACCACCCA	415	32	1184	8	12	14	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10906504-10906934	Cluster_206	Pocillopora_meandrina_HIv1___Sc0000000	10906504	10906934	431	600	103	0.9933333333333333	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	222	6	588	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10929261-10929684	Cluster_207	Pocillopora_meandrina_HIv1___Sc0000000	10929261	10929684	424	171	57	0.2631578947368421	.	AACCAUCUCAUGGAUCAGAACCAG	52	1	68	0	23	2	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:10986267-10986682	Cluster_208	Pocillopora_meandrina_HIv1___Sc0000000	10986267	10986682	416	104	26	0.9615384615384616	+	GCUCAUCGACCUCAUU	39	99	4	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11008650-11009079	Cluster_209	Pocillopora_meandrina_HIv1___Sc0000000	11008650	11009079	430	322	36	1.0	+	UGACUGUGCUAAGUCAUUUGCUGCAAAUGA	137	7	302	1	3	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11039301-11039720	Cluster_210	Pocillopora_meandrina_HIv1___Sc0000000	11039301	11039720	420	170	7	0.9941176470588236	+	AGAAGUGGAAAGAAAAUUUU	142	170	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11041565-11041992	Cluster_211	Pocillopora_meandrina_HIv1___Sc0000000	11041565	11041992	428	268	47	0.9888059701492538	+	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	83	1	256	0	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11041998-11042974	Cluster_212	Pocillopora_meandrina_HIv1___Sc0000000	11041998	11042974	977	797	413	0.9360100376411543	+	UGGGUUUAAGGAGCUUCUCGCUUGUU	61	12	721	4	9	27	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11043025-11043456	Cluster_213	Pocillopora_meandrina_HIv1___Sc0000000	11043025	11043456	432	468	189	0.9273504273504274	+	UAAUUCCAUCUUGCGCUGAUAGCUCGU	47	4	449	1	0	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11043472-11043898	Cluster_214	Pocillopora_meandrina_HIv1___Sc0000000	11043472	11043898	427	178	85	0.898876404494382	+	UGAACUUCUCGGCUCCAAACACUAUGG	34	1	167	2	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11044016-11044443	Cluster_215	Pocillopora_meandrina_HIv1___Sc0000000	11044016	11044443	428	385	175	0.8545454545454545	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	62	2	355	1	0	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11044450-11046447	Cluster_216	Pocillopora_meandrina_HIv1___Sc0000000	11044450	11046447	1998	4791	1605	0.8824879983302024	+	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	349	52	4458	26	27	74	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11062624-11063039	Cluster_217	Pocillopora_meandrina_HIv1___Sc0000000	11062624	11063039	416	278	22	0.9964028776978417	+	GAAUCGGCCGUGGAC	104	266	12	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11067582-11068009	Cluster_218	Pocillopora_meandrina_HIv1___Sc0000000	11067582	11068009	428	139	61	0.9856115107913669	+	UAUCAAGUAGAGAUGUCUGAGCCCGAGG	18	0	134	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11068926-11069353	Cluster_219	Pocillopora_meandrina_HIv1___Sc0000000	11068926	11069353	428	179	82	0.9329608938547486	+	UGUUCUUGUAGUCUUUUAACAGCUUGUU	21	0	175	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11070468-11070893	Cluster_220	Pocillopora_meandrina_HIv1___Sc0000000	11070468	11070893	426	138	67	0.8260869565217391	+	UAGUGACCGUAUCUUAAACUCCCUAUUA	42	3	129	3	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11071238-11071733	Cluster_221	Pocillopora_meandrina_HIv1___Sc0000000	11071238	11071733	496	501	197	0.8922155688622755	+	UGAAAUAACUAAGUCCAGAAUAUUCUGAUU	26	8	471	0	2	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11077717-11078147	Cluster_222	Pocillopora_meandrina_HIv1___Sc0000000	11077717	11078147	431	216	87	0.9398148148148148	+	UGAAUAGUGUGUAUAUUGAAAGGUCUCGGUC	35	0	203	4	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11489850-11490268	Cluster_223	Pocillopora_meandrina_HIv1___Sc0000000	11489850	11490268	419	84	28	0.0	-	GACGGACUGGGAGAGCUCG	10	30	33	3	10	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11542819-11544140	Cluster_224	Pocillopora_meandrina_HIv1___Sc0000000	11542819	11544140	1322	1474	519	0.9118046132971506	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	97	17	1369	8	5	38	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11544360-11545811	Cluster_225	Pocillopora_meandrina_HIv1___Sc0000000	11544360	11545811	1452	1668	735	0.7260191846522782	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	107	25	1507	11	4	32	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11552655-11555295	Cluster_226	Pocillopora_meandrina_HIv1___Sc0000000	11552655	11555295	2641	9046	1905	0.9923723192571302	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1266	57	8825	19	31	38	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11557735-11558202	Cluster_227	Pocillopora_meandrina_HIv1___Sc0000000	11557735	11558202	468	233	89	0.9914163090128756	+	UUCAUAUCUAGUAUCAUUCUGAAAAUUAUU	21	2	223	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11558690-11559293	Cluster_228	Pocillopora_meandrina_HIv1___Sc0000000	11558690	11559293	604	562	162	0.9217081850533808	+	UGAUUGAAACUUGAAGAAGAGCUUGUAAC	60	49	510	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11559941-11560371	Cluster_229	Pocillopora_meandrina_HIv1___Sc0000000	11559941	11560371	431	488	119	0.9918032786885246	+	UGUAAUCUAGAUCUUUGCUUGUAUCGGCAC	95	4	479	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11561261-11561727	Cluster_230	Pocillopora_meandrina_HIv1___Sc0000000	11561261	11561727	467	537	224	0.9906890130353817	+	UCACACGUGCUUGAACUUGUCUUUUAAGGA	30	8	515	1	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11566072-11566658	Cluster_231	Pocillopora_meandrina_HIv1___Sc0000000	11566072	11566658	587	608	208	0.9950657894736842	+	UAUUGUUUGCAAAAAGCUCUCUUGACUGC	83	12	572	2	3	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11566681-11567857	Cluster_232	Pocillopora_meandrina_HIv1___Sc0000000	11566681	11567857	1177	3117	567	0.9829964709656721	+	UAGAGCUCUUGUUUUUUCCACACCAAUA	409	36	2996	6	8	19	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11568059-11570378	Cluster_233	Pocillopora_meandrina_HIv1___Sc0000000	11568059	11570378	2320	43880	3444	0.9938012762078395	+	UGGAAACAUCUUCUCUGCCAAUUCCCAUU	2380	1427	39640	136	595	1515	567	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11574178-11574789	Cluster_234	Pocillopora_meandrina_HIv1___Sc0000000	11574178	11574789	612	740	320	0.8986486486486487	+	UCAUCAUAGCUGUCUUUCUCUGCAGAGC	48	21	662	6	8	10	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11576455-11577454	Cluster_235	Pocillopora_meandrina_HIv1___Sc0000000	11576455	11577454	1000	1243	560	0.333869670152856	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	60	29	1094	7	16	25	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11580662-11581090	Cluster_236	Pocillopora_meandrina_HIv1___Sc0000000	11580662	11581090	429	176	35	1.0	+	UGAGAAGUACAAGCUAUAGAGGACUGUUG	61	2	174	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11583911-11584333	Cluster_237	Pocillopora_meandrina_HIv1___Sc0000000	11583911	11584333	423	88	35	0.9886363636363636	+	UUUAUCCCAACUGGUUACAGGACAUCC	20	3	84	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11584630-11585077	Cluster_238	Pocillopora_meandrina_HIv1___Sc0000000	11584630	11585077	448	384	126	1.0	+	UGGGUGUUGUUCCUGACUCCAAGGGAAGUG	48	14	356	1	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11587332-11587855	Cluster_239	Pocillopora_meandrina_HIv1___Sc0000000	11587332	11587855	524	541	260	0.933456561922366	+	UUGGAACUUCAGCUGUGAGACGCAGGU	25	18	475	4	5	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11588495-11588920	Cluster_240	Pocillopora_meandrina_HIv1___Sc0000000	11588495	11588920	426	324	178	0.9845679012345679	+	UGUUUACUUGCUCUGCUUCUAUCUCUGU	17	1	306	1	3	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11589851-11590274	Cluster_241	Pocillopora_meandrina_HIv1___Sc0000000	11589851	11590274	424	213	99	0.9436619718309859	+	UACGAUCAGGAUUGUCCACCACACAGA	45	2	188	1	4	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11590462-11591136	Cluster_242	Pocillopora_meandrina_HIv1___Sc0000000	11590462	11591136	675	1116	445	0.9596774193548387	+	UGGGAUGUUUAUCGGGAUUUGUACCAGAU	43	18	1026	8	3	14	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11594639-11595517	Cluster_243	Pocillopora_meandrina_HIv1___Sc0000000	11594639	11595517	879	4176	485	0.9935344827586207	+	UCUUCAUUAGGCUUACUGAACUUGACGA	598	27	4081	3	13	13	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11597441-11597856	Cluster_244	Pocillopora_meandrina_HIv1___Sc0000000	11597441	11597856	416	229	118	0.9868995633187773	+	UACAUAGUGUUCUGUUCCCUUUAUAGGAC	15	5	222	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11610279-11610705	Cluster_245	Pocillopora_meandrina_HIv1___Sc0000000	11610279	11610705	427	225	53	0.9911111111111112	+	UGUUUGUAGGGGCCGAAUGUUUGUGCU	37	1	219	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11611076-11611579	Cluster_246	Pocillopora_meandrina_HIv1___Sc0000000	11611076	11611579	504	644	121	0.9937888198757764	+	UUCCUGUACUGAUUUCCUCAUGUCUUCUGC	127	21	618	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11612226-11612654	Cluster_247	Pocillopora_meandrina_HIv1___Sc0000000	11612226	11612654	429	269	71	0.9814126394052045	+	UUCAACACAUUUUCUUAGUAGUUCUGGGU	87	5	255	0	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11615894-11616321	Cluster_248	Pocillopora_meandrina_HIv1___Sc0000000	11615894	11616321	428	249	123	0.10040160642570281	-	UGUGUACUUACCAUAGCCUCGCUCUGGA	46	12	227	5	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11619882-11620712	Cluster_249	Pocillopora_meandrina_HIv1___Sc0000000	11619882	11620712	831	5516	911	0.8870558375634517	+	UAUUCUCUUCUUUGAUAAUGACUUUGA	891	26	5123	24	38	190	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11630400-11631221	Cluster_250	Pocillopora_meandrina_HIv1___Sc0000000	11630400	11631221	822	764	297	0.8900523560209425	+	UGUGUACUUACCAUAGCCUCGCUCUGGA	63	29	702	14	5	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11635028-11636324	Cluster_251	Pocillopora_meandrina_HIv1___Sc0000000	11635028	11636324	1297	6235	1156	0.9130713712910986	+	UGUUGUGCUUUUUGUUUGUCUUUGAAAA	805	52	5878	18	39	40	208	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11790564-11790980	Cluster_252	Pocillopora_meandrina_HIv1___Sc0000000	11790564	11790980	417	173	88	0.30057803468208094	.	GCUAAGAGGACGGGAACAUCAUUUC	14	11	143	4	7	8	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11794303-11794869	Cluster_253	Pocillopora_meandrina_HIv1___Sc0000000	11794303	11794869	567	937	407	0.18783351120597652	-	UAAUUUCGUGUUGCUUAAGCUGUUGAUC	88	86	756	53	11	13	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11798273-11798686	Cluster_254	Pocillopora_meandrina_HIv1___Sc0000000	11798273	11798686	414	120	49	0.008333333333333333	-	UGCUACAGAAGUAGAUUGUGUAAUCUGAGC	35	2	114	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11804184-11804611	Cluster_255	Pocillopora_meandrina_HIv1___Sc0000000	11804184	11804611	428	182	89	0.01098901098901099	-	UGAGAUUGAUUGCCUCUGUGGUGUGGAU	31	8	171	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11812161-11812601	Cluster_256	Pocillopora_meandrina_HIv1___Sc0000000	11812161	11812601	441	231	69	0.0	-	UGAAUUCUGUCACGAGUAUUAGACUCCAC	67	1	229	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11813263-11815282	Cluster_257	Pocillopora_meandrina_HIv1___Sc0000000	11813263	11815282	2020	4062	1199	0.1863613983259478	-	UGAUACGAGUAGUUGGAUACAAUCUAAACU	307	106	3699	19	32	63	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11816999-11817806	Cluster_258	Pocillopora_meandrina_HIv1___Sc0000000	11816999	11817806	808	654	300	0.7064220183486238	.	AGAGAGAAUAACUGACAAUGAUGU	42	8	523	5	7	25	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11817823-11818263	Cluster_259	Pocillopora_meandrina_HIv1___Sc0000000	11817823	11818263	441	649	191	0.8751926040061633	+	UGUAACUGGUUCACUGCGAUUUUGUAGU	120	7	609	2	2	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11818269-11818788	Cluster_260	Pocillopora_meandrina_HIv1___Sc0000000	11818269	11818788	520	935	283	0.8128342245989305	+	UGAUAUGACCUUCGGCAAAAAACUGGA	90	8	829	2	3	22	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11819697-11820119	Cluster_261	Pocillopora_meandrina_HIv1___Sc0000000	11819697	11820119	423	206	98	0.009708737864077669	-	UGCAAUUCCAGUAGCUUGAGAUUUUCUGA	22	6	196	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11820158-11820585	Cluster_262	Pocillopora_meandrina_HIv1___Sc0000000	11820158	11820585	428	173	81	0.0	-	UGACUUAGCUCGCUGGCAGGAAGAGAUA	15	2	164	0	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11822371-11824210	Cluster_263	Pocillopora_meandrina_HIv1___Sc0000000	11822371	11824210	1840	17823	2729	0.09902934410593053	-	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3087	329	15747	182	106	210	1249	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11825210-11826891	Cluster_264	Pocillopora_meandrina_HIv1___Sc0000000	11825210	11826891	1682	1992	821	0.8042168674698795	+	UCUAACGCGUUUGUCUGACAUCCCUUU	152	45	1763	20	36	29	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11828734-11829306	Cluster_265	Pocillopora_meandrina_HIv1___Sc0000000	11828734	11829306	573	409	201	0.15403422982885084	-	UUCUCCAUCGUGCUCUGAACCAUCGGAGGC	24	25	361	4	3	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11851345-11852170	Cluster_266	Pocillopora_meandrina_HIv1___Sc0000000	11851345	11852170	826	1887	369	0.11128775834658187	-	UGUGAAUUUUUGGAUCAUUGGUUGUGUU	133	6	1829	9	9	8	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11856930-11857353	Cluster_267	Pocillopora_meandrina_HIv1___Sc0000000	11856930	11857353	424	174	83	0.0	-	UGCACAUCUCCUGAAGUCGAAUAUUUUGGC	21	11	158	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11859861-11860838	Cluster_268	Pocillopora_meandrina_HIv1___Sc0000000	11859861	11860838	978	2878	400	0.006949270326615705	-	UCUUUCUCUUCUCGUAGAGACGUGACGU	882	63	2746	22	15	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11860923-11861894	Cluster_269	Pocillopora_meandrina_HIv1___Sc0000000	11860923	11861894	972	4333	586	0.019616893607200554	-	UAAGACAAGCUAUCAUUCCUGCAUUA	928	40	4092	9	67	38	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11862228-11862801	Cluster_270	Pocillopora_meandrina_HIv1___Sc0000000	11862228	11862801	574	1013	174	0.08588351431391905	-	UGUGUACUUUUGGUAGGUGGUAAUCAAA	162	19	884	15	17	34	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11864344-11864773	Cluster_271	Pocillopora_meandrina_HIv1___Sc0000000	11864344	11864773	430	374	153	0.013368983957219251	-	UGAUCCGAUUUGUAGUGGUUUUCUCCUUU	34	1	367	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11864858-11866061	Cluster_272	Pocillopora_meandrina_HIv1___Sc0000000	11864858	11866061	1204	6586	1386	0.03780747039174005	-	UCAAUAUAUCUUCUUCAAGUAUUCUGGA	579	78	6004	106	75	136	187	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11866699-11867680	Cluster_273	Pocillopora_meandrina_HIv1___Sc0000000	11866699	11867680	982	66822	1592	0.027446050701864656	-	UCCCGAUCGUUGUUAAAGUCUUAGAAACCUU	12716	422	65101	142	525	298	334	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11869197-11869625	Cluster_274	Pocillopora_meandrina_HIv1___Sc0000000	11869197	11869625	429	465	171	0.0064516129032258064	-	UACAAAGCUCUCACGAAUUCACAAACAGA	47	1	461	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11870083-11871162	Cluster_275	Pocillopora_meandrina_HIv1___Sc0000000	11870083	11871162	1080	1861	662	0.011284255776464266	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	90	42	1762	16	8	13	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11871339-11872211	Cluster_276	Pocillopora_meandrina_HIv1___Sc0000000	11871339	11872211	873	943	401	0.015906680805938492	-	UGCUGAAACGAUUUUGACAGGUUGUCA	73	10	895	3	10	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11872639-11873076	Cluster_277	Pocillopora_meandrina_HIv1___Sc0000000	11872639	11873076	438	910	306	0.001098901098901099	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	110	3	902	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11879278-11880568	Cluster_278	Pocillopora_meandrina_HIv1___Sc0000000	11879278	11880568	1291	39005	2955	0.019484681451096015	-	UUUGUAGGCUCUAACAGU	14012	19513	18245	187	266	357	437	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11880663-11881090	Cluster_279	Pocillopora_meandrina_HIv1___Sc0000000	11880663	11881090	428	1213	172	0.023907666941467436	-	UAGUAUCUGAAGUCUUUGUAACACA	429	3	1182	1	7	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11882087-11882516	Cluster_280	Pocillopora_meandrina_HIv1___Sc0000000	11882087	11882516	430	344	169	0.0029069767441860465	-	UAUUCCAAUCGUCAGGAAUUUUCCUUCUGU	30	2	333	2	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11882809-11883388	Cluster_281	Pocillopora_meandrina_HIv1___Sc0000000	11882809	11883388	580	554	268	0.02527075812274368	-	UACGAGCACUAUAGGUGGAAGAACGCCAU	19	12	517	10	0	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11884724-11885487	Cluster_282	Pocillopora_meandrina_HIv1___Sc0000000	11884724	11885487	764	623	206	0.06581059390048154	-	UAAUCCCAGGUCUUGUAUCGUAAUACUUCA	119	2	615	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11887649-11888834	Cluster_283	Pocillopora_meandrina_HIv1___Sc0000000	11887649	11888834	1186	2764	800	0.06186685962373372	-	UGUGUAACUUUGAACCUUUCCUUUUGCU	136	26	2614	9	21	32	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11894481-11895204	Cluster_284	Pocillopora_meandrina_HIv1___Sc0000000	11894481	11895204	724	1859	392	0.11403980634749865	-	UGAUAUGAAAGAUUACUUCGACUGAAA	159	182	1581	11	24	32	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11895337-11896747	Cluster_285	Pocillopora_meandrina_HIv1___Sc0000000	11895337	11896747	1411	2546	960	0.18735271013354282	-	UGCAUCGAUUUCCGCUUUGAACUUGUUC	86	53	2183	33	60	76	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11896756-11897212	Cluster_286	Pocillopora_meandrina_HIv1___Sc0000000	11896756	11897212	457	432	202	0.07175925925925926	-	UAGGUUUGUCUUCGAGUCCUAGGACGU	26	4	401	1	2	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11897488-11898266	Cluster_287	Pocillopora_meandrina_HIv1___Sc0000000	11897488	11898266	779	684	234	0.05847953216374269	-	UCUAUGCUAUUAUUCUGUUUCCGACACACU	97	13	647	6	3	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:11902264-11902850	Cluster_288	Pocillopora_meandrina_HIv1___Sc0000000	11902264	11902850	587	1414	344	0.007779349363507779	-	UGGUGUAAUUGUUUCUUCUGGAAACUC	107	113	998	65	117	67	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12237778-12238192	Cluster_289	Pocillopora_meandrina_HIv1___Sc0000000	12237778	12238192	415	92	25	1.0	+	CCGUGUUGUAGGCUA	17	84	8	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12313190-12313604	Cluster_290	Pocillopora_meandrina_HIv1___Sc0000000	12313190	12313604	415	75	1	1.0	+	CCCGUGUCGGAGCCA	75	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12327274-12327687	Cluster_291	Pocillopora_meandrina_HIv1___Sc0000000	12327274	12327687	414	166	113	0.024096385542168676	-	AAGGUUGUGGGUUCGAGUCC	7	107	33	9	7	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12448995-12450060	Cluster_292	Pocillopora_meandrina_HIv1___Sc0000000	12448995	12450060	1066	1575	245	0.540952380952381	.	UGGUUUCAAGACUUCAAGAA	532	640	647	10	19	66	193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12509921-12510343	Cluster_293	Pocillopora_meandrina_HIv1___Sc0000000	12509921	12510343	423	195	53	0.19487179487179487	-	ACACUGGUGAAGUUUUGGACUACC	44	11	98	0	1	12	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12548228-12548651	Cluster_294	Pocillopora_meandrina_HIv1___Sc0000000	12548228	12548651	424	90	12	0.011111111111111112	-	ACACUGGUGAAGUUUUGGACUACC	46	0	2	0	0	13	75	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12614642-12615056	Cluster_295	Pocillopora_meandrina_HIv1___Sc0000000	12614642	12615056	415	415	7	0.0	-	GGUUGGAUCCGGCCU	407	415	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12682298-12682725	Cluster_296	Pocillopora_meandrina_HIv1___Sc0000000	12682298	12682725	428	207	72	0.9855072463768116	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	46	2	202	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12687759-12688188	Cluster_297	Pocillopora_meandrina_HIv1___Sc0000000	12687759	12688188	430	283	102	0.9646643109540636	+	UGGAUUAUCAACUUUCAAUCGCGAGUUAGC	82	16	244	8	0	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12688213-12688640	Cluster_298	Pocillopora_meandrina_HIv1___Sc0000000	12688213	12688640	428	258	113	0.9689922480620154	+	AAGUACAGCAGAAGUCUACCAAAUGUGGA	25	23	221	4	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12688689-12689095	Cluster_299	Pocillopora_meandrina_HIv1___Sc0000000	12688689	12689095	407	115	63	1.0	+	CGAAUCUGGAUUGGCUGAGGCUUUGCA	12	8	97	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12691009-12691558	Cluster_300	Pocillopora_meandrina_HIv1___Sc0000000	12691009	12691558	550	448	167	0.9977678571428571	+	AACAGUGAAGUGCGAAUCUCUAAUGAUCUU	86	31	396	4	7	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12762833-12763259	Cluster_301	Pocillopora_meandrina_HIv1___Sc0000000	12762833	12763259	427	314	38	0.012738853503184714	-	UGAAACUCUGAUCUGAAAAUAUUUGUC	228	2	311	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12777775-12778197	Cluster_302	Pocillopora_meandrina_HIv1___Sc0000000	12777775	12778197	423	157	52	0.1464968152866242	-	AAUCUCUUUAAGCAUGGACCUGG	47	1	42	6	0	66	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12848532-12848948	Cluster_303	Pocillopora_meandrina_HIv1___Sc0000000	12848532	12848948	417	102	6	0.0	-	UGGACCUCAGAUCAGGC	57	102	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:12951425-12951935	Cluster_304	Pocillopora_meandrina_HIv1___Sc0000000	12951425	12951935	511	729	225	0.11385459533607682	-	UCCGUCUGAUAGAUAUCCAUGAAAUGUC	155	37	658	3	2	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13269363-13269787	Cluster_305	Pocillopora_meandrina_HIv1___Sc0000000	13269363	13269787	425	154	33	0.9935064935064936	+	UACCGUAGAACUUUCCAGAACAUU	46	3	86	1	0	2	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13278878-13279296	Cluster_306	Pocillopora_meandrina_HIv1___Sc0000000	13278878	13279296	419	262	160	0.9809160305343512	+	UUAUUCAUUUUACUUCUCCU	14	90	77	29	35	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13315394-13315809	Cluster_307	Pocillopora_meandrina_HIv1___Sc0000000	13315394	13315809	416	90	1	0.0	-	CGUGGAAGGUAGGUCG	90	90	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13335663-13336112	Cluster_308	Pocillopora_meandrina_HIv1___Sc0000000	13335663	13336112	450	890	213	0.998876404494382	+	CUUGUAAUUGGAAUGAGUA	125	637	52	118	33	29	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13337548-13338139	Cluster_309	Pocillopora_meandrina_HIv1___Sc0000000	13337548	13338139	592	537	298	0.9962756052141527	+	GAAGUCUGUACUGAAAGGUGU	21	177	203	57	44	34	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13607264-13607690	Cluster_310	Pocillopora_meandrina_HIv1___Sc0000000	13607264	13607690	427	114	23	0.9912280701754386	+	UCGUUUAGAUCAGAGAUCACCUCAACU	54	1	112	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13714447-13714873	Cluster_311	Pocillopora_meandrina_HIv1___Sc0000000	13714447	13714873	427	347	33	0.9855907780979827	+	UCGUUUAGAUCAGAGAUCACCUCAACU	176	0	347	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13752128-13752978	Cluster_312	Pocillopora_meandrina_HIv1___Sc0000000	13752128	13752978	851	1561	502	0.08712363869314542	-	UGAUUUAUAGGAGUAAUGAGACAUUAU	141	26	1438	23	18	16	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13753534-13755105	Cluster_313	Pocillopora_meandrina_HIv1___Sc0000000	13753534	13755105	1572	2150	959	0.06511627906976744	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	87	23	1972	8	12	91	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13777450-13777874	Cluster_314	Pocillopora_meandrina_HIv1___Sc0000000	13777450	13777874	425	255	59	0.9921568627450981	+	CGCGGAAAGAGGGGAAAUUGCACU	38	54	117	9	10	3	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13793624-13794060	Cluster_315	Pocillopora_meandrina_HIv1___Sc0000000	13793624	13794060	437	514	149	0.9863813229571985	+	UGCGAAAGAAACAGGGAAAGUUUGACGAUG	51	5	432	4	12	34	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13795207-13795634	Cluster_316	Pocillopora_meandrina_HIv1___Sc0000000	13795207	13795634	428	94	4	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	65	0	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:13888862-13889287	Cluster_317	Pocillopora_meandrina_HIv1___Sc0000000	13888862	13889287	426	104	36	1.0	+	UGUGUAGAUAUGUCUUUUGGACAGGA	39	0	100	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14041336-14042281	Cluster_318	Pocillopora_meandrina_HIv1___Sc0000000	14041336	14042281	946	2155	693	0.09234338747099768	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	174	33	2030	14	10	15	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14042286-14043154	Cluster_319	Pocillopora_meandrina_HIv1___Sc0000000	14042286	14043154	869	538	266	0.08364312267657993	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	25	5	501	5	2	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14043355-14045670	Cluster_320	Pocillopora_meandrina_HIv1___Sc0000000	14043355	14045670	2316	4495	1405	0.14527252502780869	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	182	149	3788	38	27	189	304	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14069210-14069627	Cluster_321	Pocillopora_meandrina_HIv1___Sc0000000	14069210	14069627	418	123	60	0.991869918699187	+	UGACGAUUUUCGCGGCUCGAUUUUGU	14	2	120	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14199236-14199664	Cluster_322	Pocillopora_meandrina_HIv1___Sc0000000	14199236	14199664	429	293	27	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	200	3	290	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14564110-14564538	Cluster_323	Pocillopora_meandrina_HIv1___Sc0000000	14564110	14564538	429	286	29	0.0034965034965034965	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	196	2	284	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14751024-14751453	Cluster_324	Pocillopora_meandrina_HIv1___Sc0000000	14751024	14751453	430	265	134	0.9433962264150944	+	UCAGAUGGUUGAUAACUGCAGAUGACGU	25	4	247	2	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14751995-14752696	Cluster_325	Pocillopora_meandrina_HIv1___Sc0000000	14751995	14752696	702	269	135	0.9553903345724907	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	24	0	257	2	0	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14753926-14754355	Cluster_326	Pocillopora_meandrina_HIv1___Sc0000000	14753926	14754355	430	262	143	0.8473282442748091	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	36	2	230	1	0	4	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:14917732-14918157	Cluster_327	Pocillopora_meandrina_HIv1___Sc0000000	14917732	14918157	426	159	63	0.0	-	UACGGUAUUUGAGACGCAAUAUGACUCGC	13	1	153	1	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15297104-15297532	Cluster_328	Pocillopora_meandrina_HIv1___Sc0000000	15297104	15297532	429	170	37	0.15294117647058825	-	UCUCUCUCGGUAUAGCUUUCAAAACAGUC	56	4	129	0	3	34	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15361940-15362422	Cluster_329	Pocillopora_meandrina_HIv1___Sc0000000	15361940	15362422	483	377	108	0.0	-	CCUCUAUGAUGAUUACCUUAACAC	35	168	95	17	22	32	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15365853-15366280	Cluster_330	Pocillopora_meandrina_HIv1___Sc0000000	15365853	15366280	428	212	114	0.0	-	AUUUCUCUCUGAAGGGC	11	109	84	9	4	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15682027-15682444	Cluster_331	Pocillopora_meandrina_HIv1___Sc0000000	15682027	15682444	418	206	8	0.9951456310679612	+	AAAUCCCACCUGGAUUUU	159	206	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15838658-15839444	Cluster_332	Pocillopora_meandrina_HIv1___Sc0000000	15838658	15839444	787	1197	234	0.23391812865497075	.	UGAUUGAGUCAAAGACAAUGUGGGAGUC	339	6	1103	5	9	49	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:15877485-15877913	Cluster_333	Pocillopora_meandrina_HIv1___Sc0000000	15877485	15877913	429	210	7	0.9904761904761905	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	185	0	210	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16076811-16077213	Cluster_334	Pocillopora_meandrina_HIv1___Sc0000000	16076811	16077213	403	123	68	0.975609756097561	+	AUAACUGGCUUGUGG	18	86	23	2	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16151380-16151857	Cluster_335	Pocillopora_meandrina_HIv1___Sc0000000	16151380	16151857	478	404	226	0.0	-	AAGAACCAUCUGCAUCAGACAU	12	81	140	43	51	55	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16197870-16198683	Cluster_336	Pocillopora_meandrina_HIv1___Sc0000000	16197870	16198683	814	16976	441	0.9995876531573987	+	UAUGAUAUCAUAGCCUUUGAGA	8370	1462	804	1644	10887	1174	1005	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16218376-16218795	Cluster_337	Pocillopora_meandrina_HIv1___Sc0000000	16218376	16218795	420	4963	91	0.00020149103364900262	-	GACUUGAAGCGGUUGGAA	1786	4960	1	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16370090-16370520	Cluster_338	Pocillopora_meandrina_HIv1___Sc0000000	16370090	16370520	431	1805	144	0.9894736842105263	+	AGCUCAUUCAGGACAGUCCAGCGAACUAUC	720	61	1663	13	47	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16388395-16388993	Cluster_339	Pocillopora_meandrina_HIv1___Sc0000000	16388395	16388993	599	1925	201	0.9963636363636363	+	AGCUCAUUCAGGACAGUCCAGCGAACUAUC	726	77	1770	13	40	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16449058-16449470	Cluster_340	Pocillopora_meandrina_HIv1___Sc0000000	16449058	16449470	413	128	79	0.0	-	AAAGACUGGCAGCAUUGUGGACGUUGUU	9	28	79	11	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16450619-16451049	Cluster_341	Pocillopora_meandrina_HIv1___Sc0000000	16450619	16451049	431	332	243	0.009036144578313253	-	GAAAAGAUCUGCAGAUGAAGAGAAAGAUGA	7	48	237	16	9	13	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16480310-16481760	Cluster_342	Pocillopora_meandrina_HIv1___Sc0000000	16480310	16481760	1451	2611	1057	0.31290693220988125	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	113	53	2130	57	25	112	234	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16481861-16483301	Cluster_343	Pocillopora_meandrina_HIv1___Sc0000000	16481861	16483301	1441	7287	1025	0.059009194455880334	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	1428	37	6927	22	18	160	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16894001-16894416	Cluster_344	Pocillopora_meandrina_HIv1___Sc0000000	16894001	16894416	416	120	17	0.0	-	GAUUUGGAUGGAGCUU	53	120	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:16918087-16918513	Cluster_345	Pocillopora_meandrina_HIv1___Sc0000000	16918087	16918513	427	203	61	0.0	-	GCUAUAGACUGCUCUUUGAUCCAAACACAU	36	17	112	8	14	12	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17062895-17064294	Cluster_346	Pocillopora_meandrina_HIv1___Sc0000000	17062895	17064294	1400	1753	629	0.9172846548773531	+	UAAGCAUCGUCGAUAAAUACAUUAAAGA	70	58	1543	57	15	31	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17091975-17092444	Cluster_347	Pocillopora_meandrina_HIv1___Sc0000000	17091975	17092444	470	621	182	0.00966183574879227	-	GGUAGCGUGGCCGAGU	97	519	14	27	34	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17094792-17095207	Cluster_348	Pocillopora_meandrina_HIv1___Sc0000000	17094792	17095207	416	170	60	0.9882352941176471	+	GGUAGCGUGGCCGAGC	73	153	3	5	6	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17582770-17583200	Cluster_349	Pocillopora_meandrina_HIv1___Sc0000000	17582770	17583200	431	470	53	0.0	-	UGAUCUCUGUUAUACCCUCUUGGGUAGUGU	171	2	464	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17629601-17630016	Cluster_350	Pocillopora_meandrina_HIv1___Sc0000000	17629601	17630016	416	109	13	1.0	+	GAGACUUGAAGCGGUG	66	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17858000-17858429	Cluster_351	Pocillopora_meandrina_HIv1___Sc0000000	17858000	17858429	430	184	70	0.9891304347826086	+	UAUCCGGUUGUAACGCUAGACAGUCACGCU	35	5	177	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:17927790-17928217	Cluster_352	Pocillopora_meandrina_HIv1___Sc0000000	17927790	17928217	428	118	8	0.00847457627118644	-	GUGAAUGAUGACAAGAAACAAACUGAUC	96	1	114	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18139302-18139735	Cluster_353	Pocillopora_meandrina_HIv1___Sc0000000	18139302	18139735	434	257	83	0.980544747081712	+	UGUAAGACUGACGAAGGCUAAGGUGAACAGC	27	8	226	1	1	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18537549-18537973	Cluster_354	Pocillopora_meandrina_HIv1___Sc0000000	18537549	18537973	425	84	19	0.9880952380952381	+	UUUCAGCAGAGGACAAUGAUUCAAAAGAUG	45	2	82	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18555063-18555627	Cluster_355	Pocillopora_meandrina_HIv1___Sc0000000	18555063	18555627	565	694	177	0.7593659942363112	.	UCGAAACGCAUCCAUUUUGGCCAUACA	94	29	574	14	8	43	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18556448-18556864	Cluster_356	Pocillopora_meandrina_HIv1___Sc0000000	18556448	18556864	417	305	55	0.9147540983606557	+	CUUGAAGCGGUUGGAUA	176	249	49	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18562801-18563455	Cluster_357	Pocillopora_meandrina_HIv1___Sc0000000	18562801	18563455	655	546	272	0.20512820512820512	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	82	5	494	11	3	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18563602-18564819	Cluster_358	Pocillopora_meandrina_HIv1___Sc0000000	18563602	18564819	1218	1227	475	0.10920945395273024	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	108	14	1129	4	6	29	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18585347-18586624	Cluster_359	Pocillopora_meandrina_HIv1___Sc0000000	18585347	18586624	1278	1335	507	0.27565543071161047	.	UUGGAUAAUUUUGACGAAACCAGAGACA	168	21	1217	3	13	32	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18586632-18588142	Cluster_360	Pocillopora_meandrina_HIv1___Sc0000000	18586632	18588142	1511	1341	449	0.5898583146905294	.	AGCAUACUCGAAGAACUGCAAGUUAAUGG	120	56	1227	4	16	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18589062-18589489	Cluster_361	Pocillopora_meandrina_HIv1___Sc0000000	18589062	18589489	428	373	81	0.04825737265415549	-	UGUGUUCGUUGAAUGGCUCCCCAUGCG	81	6	358	1	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18762339-18762753	Cluster_362	Pocillopora_meandrina_HIv1___Sc0000000	18762339	18762753	415	94	29	0.1276595744680851	-	GACGAACGGCGAACUA	55	85	2	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18807941-18808357	Cluster_363	Pocillopora_meandrina_HIv1___Sc0000000	18807941	18808357	417	149	20	0.9731543624161074	+	CUCUCUGGAGUUAAGGCU	37	145	2	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18814008-18814422	Cluster_364	Pocillopora_meandrina_HIv1___Sc0000000	18814008	18814422	415	103	16	0.0	-	CCCGUGUUGUAGGCA	55	100	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18820441-18820856	Cluster_365	Pocillopora_meandrina_HIv1___Sc0000000	18820441	18820856	416	162	53	0.0	-	AUCUCGUGUGGAACA	17	141	12	4	4	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18903586-18904001	Cluster_366	Pocillopora_meandrina_HIv1___Sc0000000	18903586	18904001	416	109	32	0.926605504587156	+	GCCUUAUGACCUCAUA	43	102	2	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:18972297-18972712	Cluster_367	Pocillopora_meandrina_HIv1___Sc0000000	18972297	18972712	416	104	17	0.9807692307692307	+	CUUUCCGAGGUCGCGCU	46	103	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19104877-19105303	Cluster_368	Pocillopora_meandrina_HIv1___Sc0000000	19104877	19105303	427	240	147	0.8583333333333333	+	UGAGUCGAGGUUAUUCACAAUACGAGC	32	5	210	1	3	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19105541-19106198	Cluster_369	Pocillopora_meandrina_HIv1___Sc0000000	19105541	19106198	658	1110	297	0.918018018018018	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	103	8	1045	2	5	28	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19106418-19107073	Cluster_370	Pocillopora_meandrina_HIv1___Sc0000000	19106418	19107073	656	634	311	0.6167192429022083	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	28	7	581	1	5	14	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19107224-19107868	Cluster_371	Pocillopora_meandrina_HIv1___Sc0000000	19107224	19107868	645	563	274	0.8117229129662522	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	97	10	514	7	1	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19172834-19173259	Cluster_372	Pocillopora_meandrina_HIv1___Sc0000000	19172834	19173259	426	160	113	0.0875	-	CUUGAGUCAAACAAGCGUGCACUGAAUA	12	25	120	7	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19548879-19549664	Cluster_373	Pocillopora_meandrina_HIv1___Sc0000000	19548879	19549664	786	3428	416	0.2383313885647608	.	UUCGAAGAAACUCUUGCCAUCGCCUGGA	835	38	3170	7	17	36	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19550612-19551039	Cluster_374	Pocillopora_meandrina_HIv1___Sc0000000	19550612	19551039	428	101	7	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	64	0	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19551968-19552391	Cluster_375	Pocillopora_meandrina_HIv1___Sc0000000	19551968	19552391	424	213	117	0.26291079812206575	.	UGUUGCAAAGCUCUUCGUCCAAAAGA	12	11	181	5	2	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19670489-19670916	Cluster_376	Pocillopora_meandrina_HIv1___Sc0000000	19670489	19670916	428	125	50	0.296	.	UGUUUGAUCCAAUUCAGGAUACUUUGGC	30	3	99	1	1	15	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19723216-19723629	Cluster_377	Pocillopora_meandrina_HIv1___Sc0000000	19723216	19723629	414	77	16	0.948051948051948	+	GACGACGUCAGAGAGC	53	74	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19726202-19726622	Cluster_378	Pocillopora_meandrina_HIv1___Sc0000000	19726202	19726622	421	189	96	0.7407407407407407	.	CUUUCUGAUGUAAUACGCUC	15	126	3	44	12	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19758301-19758726	Cluster_379	Pocillopora_meandrina_HIv1___Sc0000000	19758301	19758726	426	171	69	1.0	+	UGAUUGACGUACGGUAUUUGAGACGC	16	4	164	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19791285-19791992	Cluster_380	Pocillopora_meandrina_HIv1___Sc0000000	19791285	19791992	708	796	117	0.6180904522613065	.	UCCGGCUCGAAGGACCAU	143	487	275	21	3	10	0	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000000:19799557-19800087	Cluster_381	Pocillopora_meandrina_HIv1___Sc0000000	19799557	19800087	531	3362	880	0.000594883997620464	-	AGGAAGAAUGAGACACUCUGAUUGCU	69	852	1794	193	247	140	136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19800614-19801084	Cluster_382	Pocillopora_meandrina_HIv1___Sc0000000	19800614	19801084	471	2561	388	0.0007809449433814916	-	GUCAAUGAUGAUUGUGUGAUUCCCCUUCA	476	173	1831	81	56	82	338	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19802252-19802723	Cluster_383	Pocillopora_meandrina_HIv1___Sc0000000	19802252	19802723	472	1471	223	0.012236573759347382	-	UGGAAAUGAUGUUACUCCGUGU	345	287	465	130	373	135	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19809696-19810174	Cluster_384	Pocillopora_meandrina_HIv1___Sc0000000	19809696	19810174	479	944	247	0.00211864406779661	-	CUACCAUCUGAGGGCU	67	540	199	72	45	26	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19813053-19813481	Cluster_385	Pocillopora_meandrina_HIv1___Sc0000000	19813053	19813481	429	418	286	0.004784688995215311	-	GAUCCGUGGAGCUAAGGACAAGAAGCU	8	160	155	21	26	23	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19813596-19814045	Cluster_386	Pocillopora_meandrina_HIv1___Sc0000000	19813596	19814045	450	269	169	0.007434944237918215	-	CAGAUCCACAGGAUCCGUAUCACUCU	10	126	79	14	18	16	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19856455-19856872	Cluster_387	Pocillopora_meandrina_HIv1___Sc0000000	19856455	19856872	418	156	43	0.9743589743589743	+	ACCGAGGAGGAAAGACUG	55	138	10	1	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19934098-19934580	Cluster_388	Pocillopora_meandrina_HIv1___Sc0000000	19934098	19934580	483	5102	182	0.9949039592316739	+	GUAGUCGUGGCCGAGUGG	1605	5014	15	36	10	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19970946-19971367	Cluster_389	Pocillopora_meandrina_HIv1___Sc0000000	19970946	19971367	422	188	89	0.026595744680851064	-	AAUUAUGAUGAGAACUAUACUUCAAGGU	18	30	99	23	14	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19971632-19972106	Cluster_390	Pocillopora_meandrina_HIv1___Sc0000000	19971632	19972106	475	16258	1030	0.0	-	CUGUGAUAAAACUUGAAGUUCUGAGC	2024	4615	7366	1039	1055	622	1561	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19974441-19974957	Cluster_391	Pocillopora_meandrina_HIv1___Sc0000000	19974441	19974957	517	723	353	0.0	-	UUCAGUGGUUCCUGUCGAGAGGUACAUA	20	259	308	57	21	33	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:19977738-19978273	Cluster_392	Pocillopora_meandrina_HIv1___Sc0000000	19977738	19978273	536	1026	331	0.007797270955165692	-	AUGGCCAUUUGCUUGUUCCCUGA	90	248	364	73	93	199	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20051814-20052242	Cluster_393	Pocillopora_meandrina_HIv1___Sc0000000	20051814	20052242	429	277	42	0.0	-	GAGUAAAUCACGAGAGAAAGACAAGGACA	117	5	266	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20072489-20072904	Cluster_394	Pocillopora_meandrina_HIv1___Sc0000000	20072489	20072904	416	3596	11	0.00027808676307007786	-	UUCCGAGGUCGCGGCC	2902	3596	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20238800-20239217	Cluster_395	Pocillopora_meandrina_HIv1___Sc0000000	20238800	20239217	418	889	98	0.006749156355455568	-	UCCGGCUCGAAGGACCA	325	780	105	1	1	2	0	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000000:20372416-20372510	Cluster_396	Pocillopora_meandrina_HIv1___Sc0000000	20372416	20372510	95	513421	441	0.0	-	UCAAGUCUAGGCUGGUUAGUUU	353179	2932	19	20448	487366	2527	129	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000000:20455492-20455961	Cluster_397	Pocillopora_meandrina_HIv1___Sc0000000	20455492	20455961	470	790	233	0.0012658227848101266	-	GGUAGCGUGGCCGAGU	127	649	35	26	37	29	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20487173-20487823	Cluster_398	Pocillopora_meandrina_HIv1___Sc0000000	20487173	20487823	651	2407	960	0.9464063149148317	+	CAAUUCAGACUACUCUUUGUCCAACCCAA	84	805	658	309	316	115	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20534016-20535105	Cluster_399	Pocillopora_meandrina_HIv1___Sc0000000	20534016	20535105	1090	3950	1788	0.4339240506329114	.	UUCUGGCGUAUAACUGUUCACC	87	2118	76	1088	529	111	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20554496-20554926	Cluster_400	Pocillopora_meandrina_HIv1___Sc0000000	20554496	20554926	431	439	112	0.009111617312072893	-	GCCCGACUAGCUCAGUCGGUAGAGCAUGA	161	83	341	8	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20557163-20557593	Cluster_401	Pocillopora_meandrina_HIv1___Sc0000000	20557163	20557593	431	5538	335	1.0	+	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	2395	380	5130	6	8	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20559748-20560165	Cluster_402	Pocillopora_meandrina_HIv1___Sc0000000	20559748	20560165	418	1130	58	1.0	+	CAGUCGGUAGAGCAUA	462	1130	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20665499-20665929	Cluster_403	Pocillopora_meandrina_HIv1___Sc0000000	20665499	20665929	431	981	128	0.0010193679918450561	-	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	447	92	883	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20681229-20681645	Cluster_404	Pocillopora_meandrina_HIv1___Sc0000000	20681229	20681645	417	1084	113	0.9990774907749077	+	GCUGCCGGUCGUUGG	629	1028	39	9	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20703269-20703749	Cluster_405	Pocillopora_meandrina_HIv1___Sc0000000	20703269	20703749	481	3690	633	0.002168021680216802	-	GCGCGGAUGAGCCUCACUGGUGUGGGGU	268	1843	1366	167	125	116	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:20729679-20730094	Cluster_406	Pocillopora_meandrina_HIv1___Sc0000000	20729679	20730094	416	129	15	0.0	-	GCUGGAUGAUGAGACU	67	126	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21034486-21034968	Cluster_407	Pocillopora_meandrina_HIv1___Sc0000000	21034486	21034968	483	1401	175	0.9785867237687366	+	UCAUCUUCGGAGCUGACUGUAACAAGCC	295	7	1357	3	6	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21389687-21390090	Cluster_408	Pocillopora_meandrina_HIv1___Sc0000000	21389687	21390090	404	159	114	0.12578616352201258	-	GCCGAGGUCGAGAGUU	7	87	32	16	8	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21409875-21410303	Cluster_409	Pocillopora_meandrina_HIv1___Sc0000000	21409875	21410303	429	453	42	0.002207505518763797	-	UGUGCAGGAACUUAAAAAUACAAUCUAUA	288	5	446	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21472540-21472955	Cluster_410	Pocillopora_meandrina_HIv1___Sc0000000	21472540	21472955	416	286	5	0.006993006993006993	-	CGUGUGCUCUUAACUA	242	284	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000000:21554830-21555249	Cluster_411	Pocillopora_meandrina_HIv1___Sc0000000	21554830	21555249	420	375	249	0.7013333333333334	.	UCCGAUAUUGGUGCUGACGU	19	228	32	79	30	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:69798-71462	Cluster_412	Pocillopora_meandrina_HIv1___Sc0000001	69798	71462	1665	14794	1216	0.19514668108692712	-	UUGUCUGGAUUGUACACUUUGAAGUGCA	1352	82	14258	41	46	90	277	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:244653-245089	Cluster_413	Pocillopora_meandrina_HIv1___Sc0000001	244653	245089	437	605	150	0.001652892561983471	-	CAGCACAUUUACUGAAGCCGUCUGA	60	36	490	12	12	17	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:412106-413609	Cluster_414	Pocillopora_meandrina_HIv1___Sc0000001	412106	413609	1504	1772	781	0.044582392776523705	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	55	16	1652	12	19	34	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:417093-417508	Cluster_415	Pocillopora_meandrina_HIv1___Sc0000001	417093	417508	416	256	42	0.171875	-	GGGACUGUAGUUCAAC	189	230	15	4	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:425523-426000	Cluster_416	Pocillopora_meandrina_HIv1___Sc0000001	425523	426000	478	480	183	0.8479166666666667	+	UCACAAUCUUCCUUACUGCUUCUGGGUA	49	7	453	3	1	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:556066-556480	Cluster_417	Pocillopora_meandrina_HIv1___Sc0000001	556066	556480	415	271	195	0.0036900369003690036	-	GAAGAUGGACAAUGGCU	9	116	80	16	22	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:818096-818531	Cluster_418	Pocillopora_meandrina_HIv1___Sc0000001	818096	818531	436	402	191	0.9950248756218906	+	UGUAACUGAAAAGAUCUUGAAGGAACUGAA	16	14	368	5	7	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:868706-869124	Cluster_419	Pocillopora_meandrina_HIv1___Sc0000001	868706	869124	419	319	226	0.009404388714733543	-	CCGAACUGAGAUCAUUAUUUUGGCCA	6	90	133	21	27	9	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:891761-892187	Cluster_420	Pocillopora_meandrina_HIv1___Sc0000001	891761	892187	427	189	80	0.9947089947089947	+	UGAUUGACGUACGGUAUUUGAGACGC	23	4	174	0	3	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:911219-911649	Cluster_421	Pocillopora_meandrina_HIv1___Sc0000001	911219	911649	431	456	99	0.8881578947368421	+	CGAACCAACAAGAACAAUAUGUGCUGACUAC	130	4	445	1	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:912150-912578	Cluster_422	Pocillopora_meandrina_HIv1___Sc0000001	912150	912578	429	249	75	0.9959839357429718	+	UUGCAAAUGAAUCAGCAGAAUGUAGAGAG	47	2	239	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:914054-914481	Cluster_423	Pocillopora_meandrina_HIv1___Sc0000001	914054	914481	428	140	53	0.014285714285714285	-	AAUGGAAAGAAAACACUGAAAAAUGAGG	28	11	102	0	0	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:917428-917858	Cluster_424	Pocillopora_meandrina_HIv1___Sc0000001	917428	917858	431	316	92	0.47151898734177217	.	UCGAUCACCAGCGCACUCCAAACCAAUAAGG	36	2	256	8	0	29	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:968471-969150	Cluster_425	Pocillopora_meandrina_HIv1___Sc0000001	968471	969150	680	1801	450	0.18600777345918934	-	UGUACUCUUUCUAUUUUCCUUCGUUCCUGGG	139	55	1686	12	6	7	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:974684-975142	Cluster_426	Pocillopora_meandrina_HIv1___Sc0000001	974684	975142	459	2072	176	0.9174710424710425	+	UUUCACCAAUCCGAAGUGUCCCAAAAGU	478	31	1918	3	12	29	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1077987-1078403	Cluster_427	Pocillopora_meandrina_HIv1___Sc0000001	1077987	1078403	417	128	15	0.03125	-	UGUGUUUUUCGGUCUGU	68	122	2	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1354657-1355144	Cluster_428	Pocillopora_meandrina_HIv1___Sc0000001	1354657	1355144	488	4193	461	0.003100405437634152	-	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	1130	390	3670	18	32	48	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1459402-1459496	Cluster_429	Pocillopora_meandrina_HIv1___Sc0000001	1459402	1459496	95	3388	133	1.0	+	AAAGAAGUGCAAGUGGUAGAGA	1677	724	3	334	2261	57	9	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000001:1537727-1538141	Cluster_430	Pocillopora_meandrina_HIv1___Sc0000001	1537727	1538141	415	132	7	0.0	-	UCCGCUGUAGUAUAG	85	132	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1587809-1588304	Cluster_431	Pocillopora_meandrina_HIv1___Sc0000001	1587809	1588304	496	301	128	0.9269102990033222	+	UCUGAUCGACGAGUUUCAAUCCUUUGU	28	1	294	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1588893-1589304	Cluster_432	Pocillopora_meandrina_HIv1___Sc0000001	1588893	1589304	412	181	93	0.9337016574585635	+	UAUGUGAUCGGUGAAUUUGCUUCAACA	24	0	169	1	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1589392-1589817	Cluster_433	Pocillopora_meandrina_HIv1___Sc0000001	1589392	1589817	426	127	68	0.7952755905511811	.	UGUAUUGAUUGAACUUGUCGGUUGACC	14	2	109	0	2	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1590307-1590710	Cluster_434	Pocillopora_meandrina_HIv1___Sc0000001	1590307	1590710	404	160	81	0.9	+	UACUGGAAUAAUAACUUUACGAUCAACA	19	2	151	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1591154-1591562	Cluster_435	Pocillopora_meandrina_HIv1___Sc0000001	1591154	1591562	409	141	89	0.9219858156028369	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	13	0	135	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1606008-1606599	Cluster_436	Pocillopora_meandrina_HIv1___Sc0000001	1606008	1606599	592	449	104	0.9755011135857461	+	UACUCCAUUUUUCUGCAGCCUUUUUAUC	65	2	437	6	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1639234-1639676	Cluster_437	Pocillopora_meandrina_HIv1___Sc0000001	1639234	1639676	443	215	168	1.0	+	CUACGUAGAUUUCACAUGUGUGC	5	36	115	11	14	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1689505-1689966	Cluster_438	Pocillopora_meandrina_HIv1___Sc0000001	1689505	1689966	462	359	242	0.9972144846796658	+	CCUCUGCCACGAGAAGAACGAACU	7	107	143	29	15	21	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1690274-1690785	Cluster_439	Pocillopora_meandrina_HIv1___Sc0000001	1690274	1690785	512	462	272	0.9978354978354979	+	CCGAGAAACAAACCGAGACU	10	149	192	20	35	43	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1691390-1691808	Cluster_440	Pocillopora_meandrina_HIv1___Sc0000001	1691390	1691808	419	239	159	1.0	+	CUUGGUCAUGCGCCGAAUGCCUGAACG	14	83	103	14	9	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1692256-1692988	Cluster_441	Pocillopora_meandrina_HIv1___Sc0000001	1692256	1692988	733	926	582	0.9989200863930886	+	UACAGACAUCUAUGGUAACUCAAAAA	18	234	415	60	58	91	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1709074-1709490	Cluster_442	Pocillopora_meandrina_HIv1___Sc0000001	1709074	1709490	417	201	22	0.9950248756218906	+	GUUGGAUCCGGCCCACU	129	196	4	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1723121-1723549	Cluster_443	Pocillopora_meandrina_HIv1___Sc0000001	1723121	1723549	429	366	44	0.00819672131147541	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	270	2	364	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1752847-1753261	Cluster_444	Pocillopora_meandrina_HIv1___Sc0000001	1752847	1753261	415	80	16	1.0	+	CCGGCCUGGACUGGC	36	80	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1910655-1911071	Cluster_445	Pocillopora_meandrina_HIv1___Sc0000001	1910655	1911071	417	144	19	0.0	-	CGAGACUUGAAGCGGUU	59	144	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:1981097-1981525	Cluster_446	Pocillopora_meandrina_HIv1___Sc0000001	1981097	1981525	429	124	56	0.9919354838709677	+	UAUGAUUACGAGGAAUUCUCCAAAGACUUUG	29	10	105	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2046484-2048013	Cluster_447	Pocillopora_meandrina_HIv1___Sc0000001	2046484	2048013	1530	1403	529	0.9722024233784747	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	96	19	1342	5	0	13	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2049667-2051839	Cluster_448	Pocillopora_meandrina_HIv1___Sc0000001	2049667	2051839	2173	2898	1065	0.9233954451345756	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	87	45	2701	29	12	23	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2051958-2052443	Cluster_449	Pocillopora_meandrina_HIv1___Sc0000001	2051958	2052443	486	478	276	0.7782426778242678	.	UGUUCCGGUACAAAUUUUCCCUGCAUA	14	8	405	6	9	10	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2111236-2111657	Cluster_450	Pocillopora_meandrina_HIv1___Sc0000001	2111236	2111657	422	85	2	1.0	+	UCUGACGAAGGGCUGACACUCG	84	1	0	0	84	0	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2187675-2188091	Cluster_451	Pocillopora_meandrina_HIv1___Sc0000001	2187675	2188091	417	110	20	0.0	-	AUGUACAAUUCUAGACA	90	98	9	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2233397-2233817	Cluster_452	Pocillopora_meandrina_HIv1___Sc0000001	2233397	2233817	421	101	40	0.9900990099009901	+	GAACCGAAAACUUUCAACAAAAUUCCCUUU	19	14	69	6	9	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2235738-2236162	Cluster_453	Pocillopora_meandrina_HIv1___Sc0000001	2235738	2236162	425	158	83	1.0	+	ACGAAAAUAGCAGAAUGAACGAAGAAGCAC	15	4	147	5	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2237617-2238340	Cluster_454	Pocillopora_meandrina_HIv1___Sc0000001	2237617	2238340	724	3211	516	0.1320460915602616	-	UGAAACUACUUGAACUGGUUCGCUUCAAU	1023	284	2574	124	52	46	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2243710-2244293	Cluster_455	Pocillopora_meandrina_HIv1___Sc0000001	2243710	2244293	584	2614	377	0.06197398622800306	-	UUAAAUGAAGUUUCCAAUGUUUGACUGUC	1087	27	2482	15	17	44	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2254606-2255032	Cluster_456	Pocillopora_meandrina_HIv1___Sc0000001	2254606	2255032	427	148	90	0.9797297297297297	+	UGCAAGAGUUUUUCGCCGCGAGACACCUG	26	12	125	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2275231-2275660	Cluster_457	Pocillopora_meandrina_HIv1___Sc0000001	2275231	2275660	430	460	113	1.0	+	ACGAAAAUAACAGAAUGAACUUAGAAGCAC	144	4	443	2	4	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2276928-2277360	Cluster_458	Pocillopora_meandrina_HIv1___Sc0000001	2276928	2277360	433	380	129	0.9394736842105263	+	UUAAAGUAAAAAACACAAAGCUUCCUGCAGA	64	20	348	1	6	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2285038-2285666	Cluster_459	Pocillopora_meandrina_HIv1___Sc0000001	2285038	2285666	629	914	319	0.3938730853391685	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	69	6	874	7	4	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2286291-2287142	Cluster_460	Pocillopora_meandrina_HIv1___Sc0000001	2286291	2287142	852	1202	250	0.8951747088186356	+	CGUGUACGACGCCUCUGCCCGAGCUUCAG	319	10	1153	15	4	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2288505-2288931	Cluster_461	Pocillopora_meandrina_HIv1___Sc0000001	2288505	2288931	427	226	99	0.2610619469026549	.	UCACGAAUCUUUGCCAUUGUGAGGCUCACU	28	7	204	0	2	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2289104-2289963	Cluster_462	Pocillopora_meandrina_HIv1___Sc0000001	2289104	2289963	860	405	227	0.37777777777777777	.	UCUAACGGAUACAGCUGCUGUACUGCU	19	21	321	6	8	21	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2290080-2290503	Cluster_463	Pocillopora_meandrina_HIv1___Sc0000001	2290080	2290503	424	120	31	0.9583333333333334	+	UAGUGUUGCUAUACUGGGAUUUCC	35	2	65	0	0	0	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2303039-2303468	Cluster_464	Pocillopora_meandrina_HIv1___Sc0000001	2303039	2303468	430	534	115	1.0	+	GAACCAAAAACUUUCAACAAAAUUCCCUUU	205	13	498	3	20	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2305359-2305784	Cluster_465	Pocillopora_meandrina_HIv1___Sc0000001	2305359	2305784	426	110	54	1.0	+	GGCCGACUGAAGACGAACGAGAAUUAGC	17	1	108	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2324994-2325422	Cluster_466	Pocillopora_meandrina_HIv1___Sc0000001	2324994	2325422	429	216	58	0.9814814814814815	+	UUAUUUGGAACCGAAAACUUUC	43	35	129	1	45	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2327372-2327799	Cluster_467	Pocillopora_meandrina_HIv1___Sc0000001	2327372	2327799	428	138	47	0.9927536231884058	+	ACGAAAAUAGCAGAAUGAACGAAGAAGC	18	1	131	2	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2328890-2329313	Cluster_468	Pocillopora_meandrina_HIv1___Sc0000001	2328890	2329313	424	176	86	0.23295454545454544	.	AAGCGUGAAACUACUUGAACCGGUU	20	21	101	16	13	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2348015-2348429	Cluster_469	Pocillopora_meandrina_HIv1___Sc0000001	2348015	2348429	415	76	37	1.0	+	ACGAAAAUAGCAGAAUGAACGAAGAAGC	11	1	72	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2368290-2368717	Cluster_470	Pocillopora_meandrina_HIv1___Sc0000001	2368290	2368717	428	99	29	0.9696969696969697	+	GAGCCGAAAACUUUCAACAAAAUUCCCUAU	19	2	80	10	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2487360-2487774	Cluster_471	Pocillopora_meandrina_HIv1___Sc0000001	2487360	2487774	415	251	146	0.9960159362549801	+	ACGAGAUGUAAACUUUCCAGAA	33	52	87	32	53	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2537226-2537638	Cluster_472	Pocillopora_meandrina_HIv1___Sc0000001	2537226	2537638	413	295	221	0.006779661016949152	-	UCAAGAGUUUCUGGAACGUGCU	6	96	88	32	30	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2731349-2731771	Cluster_473	Pocillopora_meandrina_HIv1___Sc0000001	2731349	2731771	423	221	80	0.995475113122172	+	GAUGUUGUGUCGGGACCUGAAAC	67	48	68	3	12	84	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2746252-2746672	Cluster_474	Pocillopora_meandrina_HIv1___Sc0000001	2746252	2746672	421	313	18	0.9936102236421726	+	UCGACUCCCGGUAUGGGAACA	258	1	5	270	19	17	1	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2774475-2774897	Cluster_475	Pocillopora_meandrina_HIv1___Sc0000001	2774475	2774897	423	392	67	1.0	+	CUGGCUGUGAAAGAUCUCGCAUU	116	45	5	16	132	183	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2801084-2801513	Cluster_476	Pocillopora_meandrina_HIv1___Sc0000001	2801084	2801513	430	163	20	0.0	-	CUAUGUGGCAGUGGGUUUUUGGAUCCUCAU	38	0	162	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2839815-2840245	Cluster_477	Pocillopora_meandrina_HIv1___Sc0000001	2839815	2840245	431	270	112	0.003703703703703704	-	CUGGCCGACUGAAGACGAACGAGAAUUAGC	49	3	259	0	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2842056-2842485	Cluster_478	Pocillopora_meandrina_HIv1___Sc0000001	2842056	2842485	430	162	22	0.0	-	CUAUGUGGCCGUGGGUUUUUGGAUCCUCAU	29	1	161	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2858571-2858998	Cluster_479	Pocillopora_meandrina_HIv1___Sc0000001	2858571	2858998	428	246	130	0.032520325203252036	-	UUUAAGUAAAAACACAAAGCUUCCUGCAGA	24	23	208	8	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2862246-2862675	Cluster_480	Pocillopora_meandrina_HIv1___Sc0000001	2862246	2862675	430	799	118	0.0050062578222778474	-	UUAUGUGGCAGUGUGUUUUUGGAUCCUGA	366	18	770	3	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2867935-2868506	Cluster_481	Pocillopora_meandrina_HIv1___Sc0000001	2867935	2868506	572	647	163	0.1561051004636785	-	UUCGAUCCUAAAUUCUCUCCAUG	124	43	302	25	59	195	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2881477-2881912	Cluster_482	Pocillopora_meandrina_HIv1___Sc0000001	2881477	2881912	436	278	73	0.0035971223021582736	-	GGCAGUGGGUUUUUGGAUCCUGAUCAGUGU	80	14	255	0	5	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2903040-2903512	Cluster_483	Pocillopora_meandrina_HIv1___Sc0000001	2903040	2903512	473	296	156	0.016891891891891893	-	UGCUGGCCGACUGAGGACGAACAAGAAUU	19	18	260	2	7	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:2983017-2983445	Cluster_484	Pocillopora_meandrina_HIv1___Sc0000001	2983017	2983445	429	129	33	1.0	+	UUGGAACAAAGAUUGAACAUGAUGCUUUUC	53	5	121	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3114844-3115375	Cluster_485	Pocillopora_meandrina_HIv1___Sc0000001	3114844	3115375	532	1917	335	1.0	+	UUGGAAGCUGGCUGUUUUGACU	314	295	652	120	586	145	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3115989-3116533	Cluster_486	Pocillopora_meandrina_HIv1___Sc0000001	3115989	3116533	545	530	190	0.9924528301886792	+	CAGGAAGUGAGAUGC	45	135	304	7	18	35	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3371410-3371825	Cluster_487	Pocillopora_meandrina_HIv1___Sc0000001	3371410	3371825	416	591	33	0.001692047377326565	-	AGUGUGCUCUUAGCU	282	591	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3380068-3380495	Cluster_488	Pocillopora_meandrina_HIv1___Sc0000001	3380068	3380495	428	134	43	0.06716417910447761	-	UUGGUGUGAUUGUCAUGUCUGGGAAUUUU	29	4	128	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3428038-3428455	Cluster_489	Pocillopora_meandrina_HIv1___Sc0000001	3428038	3428455	418	183	91	0.994535519125683	+	GACGAGGUGGCCGAGUGG	22	119	28	10	2	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3536699-3537117	Cluster_490	Pocillopora_meandrina_HIv1___Sc0000001	3536699	3537117	419	91	21	0.03296703296703297	-	CAACCAGGGAUUGAGAACAGAGGA	22	36	11	4	12	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3656409-3656832	Cluster_491	Pocillopora_meandrina_HIv1___Sc0000001	3656409	3656832	424	104	51	0.0	-	UACUGGACUGCAUCUGAAUAUUCCU	14	9	66	1	7	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3680479-3680894	Cluster_492	Pocillopora_meandrina_HIv1___Sc0000001	3680479	3680894	416	155	47	0.9741935483870968	+	CGCCUUCCGGACCUCA	67	127	12	6	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3883546-3883975	Cluster_493	Pocillopora_meandrina_HIv1___Sc0000001	3883546	3883975	430	279	167	0.992831541218638	+	UCUGAUGGUCUUAAGGGACGUGUGUUU	14	64	159	10	13	21	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:3998764-3999467	Cluster_494	Pocillopora_meandrina_HIv1___Sc0000001	3998764	3999467	704	1124544	6727	9.781742644129532e-06	-	CGACCAAGAUAGUCGAACUCGACCCUGUCA	306920	117136	892185	8801	59509	31377	15536	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4021711-4022206	Cluster_495	Pocillopora_meandrina_HIv1___Sc0000001	4021711	4022206	496	2598	355	0.9911470361816782	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	342	24	2496	11	16	16	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4023280-4023700	Cluster_496	Pocillopora_meandrina_HIv1___Sc0000001	4023280	4023700	421	91	31	0.0	-	GGGGAAUUAGCUCAAAUGGUAGAGCGCU	24	18	54	9	1	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4053472-4054172	Cluster_497	Pocillopora_meandrina_HIv1___Sc0000001	4053472	4054172	701	90647	5218	0.9996028550310545	+	UGGGGGUAGUCGUUCUAUGUAGAUC	8524	45429	29915	3479	2160	2937	6727	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4062957-4063383	Cluster_498	Pocillopora_meandrina_HIv1___Sc0000001	4062957	4063383	427	241	134	0.8423236514522822	+	UGAGUCGAGGUUAUUCACAAUACGAGC	32	9	200	2	1	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4063621-4064323	Cluster_499	Pocillopora_meandrina_HIv1___Sc0000001	4063621	4064323	703	5766	697	0.9634061741241762	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	1389	24	5509	17	20	75	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4064498-4065026	Cluster_500	Pocillopora_meandrina_HIv1___Sc0000001	4064498	4065026	529	648	240	0.7006172839506173	.	UGUGACUGCUUGCAAUAAUAUUAUACA	115	15	597	6	4	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4118827-4119300	Cluster_501	Pocillopora_meandrina_HIv1___Sc0000001	4118827	4119300	474	880	309	0.014772727272727272	-	GAAGGCUGCGUGUUCAGGUCACGUCGGGGU	116	425	319	47	35	37	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4229586-4230014	Cluster_502	Pocillopora_meandrina_HIv1___Sc0000001	4229586	4230014	429	422	83	0.995260663507109	+	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	150	24	385	3	5	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4298315-4298771	Cluster_503	Pocillopora_meandrina_HIv1___Sc0000001	4298315	4298771	457	10456	782	0.0019127773527161439	-	ACGAUCUUCUGAGAUUAAGCCUUUGUU	2185	1567	6356	765	879	451	438	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4312314-4312718	Cluster_504	Pocillopora_meandrina_HIv1___Sc0000001	4312314	4312718	405	125	99	0.008	-	CGGGGAAGUGCUGUUGUAGUU	4	57	32	8	9	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4313477-4313891	Cluster_505	Pocillopora_meandrina_HIv1___Sc0000001	4313477	4313891	415	190	140	0.0	-	GUGAGGGCAAACUGCAAGAAGACC	6	78	48	13	14	23	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4315110-4315575	Cluster_506	Pocillopora_meandrina_HIv1___Sc0000001	4315110	4315575	466	324	205	0.0	-	GCAGGGCUUUCAGCAAGAACGGAAGA	13	122	85	45	29	23	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4316894-4317370	Cluster_507	Pocillopora_meandrina_HIv1___Sc0000001	4316894	4317370	477	297	151	0.006734006734006734	-	CCUCGUACGUAGGAAGAACAGGCA	20	63	108	24	11	49	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4317599-4318009	Cluster_508	Pocillopora_meandrina_HIv1___Sc0000001	4317599	4318009	411	190	142	0.010526315789473684	-	GAAUGGAGGAAUGGACA	5	71	65	13	15	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4318455-4318865	Cluster_509	Pocillopora_meandrina_HIv1___Sc0000001	4318455	4318865	411	189	139	0.005291005291005291	-	GCCGAAAUGGGACUGGAUGU	7	100	45	21	7	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4345270-4345692	Cluster_510	Pocillopora_meandrina_HIv1___Sc0000001	4345270	4345692	423	102	58	0.06862745098039216	-	AAUGGGAAAACGAGAACAGCGUGAGUGC	7	2	86	0	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4361258-4364034	Cluster_511	Pocillopora_meandrina_HIv1___Sc0000001	4361258	4364034	2777	11273	2173	0.945888405925663	+	UACGAGCGAUAGAUCUUAAGCAUGUGCUGC	859	68	10313	124	73	113	582	N	N	ath-miR5658
Pocillopora_meandrina_HIv1___Sc0000001:4364286-4365034	Cluster_512	Pocillopora_meandrina_HIv1___Sc0000001	4364286	4365034	749	1126	453	0.6021314387211367	.	GCGUUGUUUAAGCUGACAUCUUACUGAUA	92	13	976	8	10	34	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4428342-4428761	Cluster_513	Pocillopora_meandrina_HIv1___Sc0000001	4428342	4428761	420	526	61	1.0	+	AAUAAGCGGAGGAAAAG	67	525	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4445438-4445866	Cluster_514	Pocillopora_meandrina_HIv1___Sc0000001	4445438	4445866	429	123	31	0.967479674796748	+	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	46	10	110	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4479220-4479714	Cluster_515	Pocillopora_meandrina_HIv1___Sc0000001	4479220	4479714	495	512	291	0.205078125	.	UCCGGUACAAAUUUUCCCUGCAUACUUAGA	16	7	447	1	5	13	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4479833-4480826	Cluster_516	Pocillopora_meandrina_HIv1___Sc0000001	4479833	4480826	994	1138	478	0.08260105448154657	-	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	88	11	1051	7	7	11	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4480966-4482069	Cluster_517	Pocillopora_meandrina_HIv1___Sc0000001	4480966	4482069	1104	1754	583	0.04047890535917902	-	UAUAGUUCUUCUGUACUGGCUCAUUGUC	230	16	1668	13	5	22	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4483238-4485189	Cluster_518	Pocillopora_meandrina_HIv1___Sc0000001	4483238	4485189	1952	1900	774	0.05421052631578947	-	UGAGACUCUCUUGUUGUAAUAUUGCUUG	107	44	1752	20	3	31	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4593132-4593547	Cluster_519	Pocillopora_meandrina_HIv1___Sc0000001	4593132	4593547	416	134	67	0.022388059701492536	-	UAAGAUCUGACUUUCACAUAGCUAGGA	9	7	122	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:4872395-4873265	Cluster_520	Pocillopora_meandrina_HIv1___Sc0000001	4872395	4873265	871	703	185	0.5007112375533428	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	173	39	555	17	13	31	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5026269-5026686	Cluster_521	Pocillopora_meandrina_HIv1___Sc0000001	5026269	5026686	418	180	27	0.011111111111111112	-	GUCCUGGCAGGGUCGCCA	94	177	0	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5036295-5036724	Cluster_522	Pocillopora_meandrina_HIv1___Sc0000001	5036295	5036724	430	326	88	0.911042944785276	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUC	112	25	267	9	6	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5073837-5074560	Cluster_523	Pocillopora_meandrina_HIv1___Sc0000001	5073837	5074560	724	639	86	0.03129890453834116	-	UGGUAAAAUUCUGUUCAAAGUAGGCG	98	3	630	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5093741-5094167	Cluster_524	Pocillopora_meandrina_HIv1___Sc0000001	5093741	5094167	427	344	38	0.0	-	UGGUAAAAUUCUGUUCAAAGUAGGCUU	100	0	344	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5129936-5130336	Cluster_525	Pocillopora_meandrina_HIv1___Sc0000001	5129936	5130336	401	155	84	0.4129032258064516	.	UUUGAGGGACUUGUCCACAUAAAGCGU	23	37	84	21	11	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5144160-5145106	Cluster_526	Pocillopora_meandrina_HIv1___Sc0000001	5144160	5145106	947	5320	997	0.6402255639097745	.	UGCAUUGUAAUCGGGAUAGACCUAUUGA	401	118	4548	54	64	197	339	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5204085-5204505	Cluster_527	Pocillopora_meandrina_HIv1___Sc0000001	5204085	5204505	421	143	90	0.993006993006993	+	GACAAUGACGUUGAAGACUGUGACGGAGACC	8	28	70	7	8	20	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5258486-5258900	Cluster_528	Pocillopora_meandrina_HIv1___Sc0000001	5258486	5258900	415	117	49	0.9914529914529915	+	CGGGGAGGUAGUGACG	29	97	8	1	4	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5482791-5483217	Cluster_529	Pocillopora_meandrina_HIv1___Sc0000001	5482791	5483217	427	230	58	0.0	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	83	61	161	2	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5559027-5559443	Cluster_530	Pocillopora_meandrina_HIv1___Sc0000001	5559027	5559443	417	159	66	0.012578616352201259	-	AAGGUCGGUGUCGCAAC	25	103	49	5	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5590662-5591125	Cluster_531	Pocillopora_meandrina_HIv1___Sc0000001	5590662	5591125	464	886	128	0.9988713318284425	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	286	25	844	2	3	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5593862-5594276	Cluster_532	Pocillopora_meandrina_HIv1___Sc0000001	5593862	5594276	415	117	25	0.9914529914529915	+	GUUUCUGUAGUGUAG	45	107	8	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5608174-5608632	Cluster_533	Pocillopora_meandrina_HIv1___Sc0000001	5608174	5608632	459	1245	222	1.0	+	CCACCCGGGGACGCCA	204	862	117	50	75	101	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5619912-5620331	Cluster_534	Pocillopora_meandrina_HIv1___Sc0000001	5619912	5620331	420	89	27	1.0	+	UCCUCGGUAGUAUAGUGGUAAGUAUCCC	24	24	65	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5625745-5626172	Cluster_535	Pocillopora_meandrina_HIv1___Sc0000001	5625745	5626172	428	214	13	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	170	0	214	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5635582-5636009	Cluster_536	Pocillopora_meandrina_HIv1___Sc0000001	5635582	5636009	428	1215	83	1.0	+	GUUUCUGUAGUGUAG	424	1003	181	7	1	19	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5637924-5638351	Cluster_537	Pocillopora_meandrina_HIv1___Sc0000001	5637924	5638351	428	219	18	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	164	0	219	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5647850-5648264	Cluster_538	Pocillopora_meandrina_HIv1___Sc0000001	5647850	5648264	415	129	29	1.0	+	GUUUCUGUAGUGUAG	46	109	20	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5669304-5669731	Cluster_539	Pocillopora_meandrina_HIv1___Sc0000001	5669304	5669731	428	236	20	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCG	173	1	234	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5675805-5676219	Cluster_540	Pocillopora_meandrina_HIv1___Sc0000001	5675805	5676219	415	138	21	0.9855072463768116	+	GUUUCUGUAGUGUAG	52	127	7	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5689306-5689734	Cluster_541	Pocillopora_meandrina_HIv1___Sc0000001	5689306	5689734	429	453	89	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	132	22	426	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5693899-5694317	Cluster_542	Pocillopora_meandrina_HIv1___Sc0000001	5693899	5694317	419	1405	54	0.997864768683274	+	GUUUCUGUAGUGUAG	662	1400	5	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5697985-5698400	Cluster_543	Pocillopora_meandrina_HIv1___Sc0000001	5697985	5698400	416	1562	60	0.998719590268886	+	GUUUCUGUAGUGUAG	1139	1536	20	4	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5746164-5746597	Cluster_544	Pocillopora_meandrina_HIv1___Sc0000001	5746164	5746597	434	2105	186	0.04465558194774347	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	485	698	1315	64	21	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5758931-5759356	Cluster_545	Pocillopora_meandrina_HIv1___Sc0000001	5758931	5759356	426	83	31	0.0	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	32	4	76	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5795956-5796535	Cluster_546	Pocillopora_meandrina_HIv1___Sc0000001	5795956	5796535	580	663	409	0.004524886877828055	-	ACUUUCGUCGGCCUAGACA	22	292	183	58	48	45	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5796550-5797171	Cluster_547	Pocillopora_meandrina_HIv1___Sc0000001	5796550	5797171	622	469	330	0.01279317697228145	-	CUCUGUCCCGUGAAU	12	188	129	38	44	45	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5801163-5801731	Cluster_548	Pocillopora_meandrina_HIv1___Sc0000001	5801163	5801731	569	377	276	0.9946949602122016	+	UUGCUCUUGUAGAUUGAUGUGAAGAAUGC	5	116	119	33	38	41	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5839178-5839672	Cluster_549	Pocillopora_meandrina_HIv1___Sc0000001	5839178	5839672	495	1593	292	0.9843063402385436	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	317	22	1498	14	15	14	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:5841909-5842324	Cluster_550	Pocillopora_meandrina_HIv1___Sc0000001	5841909	5842324	416	117	7	0.0	-	CUUGAAGCGGUUGGCG	60	117	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6004398-6004813	Cluster_551	Pocillopora_meandrina_HIv1___Sc0000001	6004398	6004813	416	373	42	1.0	+	AGCUGUGACCCUCGA	185	369	2	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6251647-6253384	Cluster_552	Pocillopora_meandrina_HIv1___Sc0000001	6251647	6253384	1738	2664	1069	0.9542042042042042	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	93	30	2523	6	24	44	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6304414-6304830	Cluster_553	Pocillopora_meandrina_HIv1___Sc0000001	6304414	6304830	417	242	10	0.9834710743801653	+	GCUACUUUGACCUCAUC	232	238	2	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6367471-6367897	Cluster_554	Pocillopora_meandrina_HIv1___Sc0000001	6367471	6367897	427	170	62	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	17	4	161	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6400836-6401347	Cluster_555	Pocillopora_meandrina_HIv1___Sc0000001	6400836	6401347	512	270	56	0.43703703703703706	.	UCCGAGUGCUGCACCUUCUUUCAUGGGA	73	11	212	3	11	22	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6419212-6419640	Cluster_556	Pocillopora_meandrina_HIv1___Sc0000001	6419212	6419640	429	380	30	0.04473684210526316	-	UGACUUGAUUUUUUACGGCAUUUUGUAUC	310	6	369	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6511512-6512099	Cluster_557	Pocillopora_meandrina_HIv1___Sc0000001	6511512	6512099	588	646	242	0.7213622291021672	.	UGUUCUGGCAUUCUUCCGGUCUGUUUUC	57	14	587	3	5	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6593781-6594210	Cluster_558	Pocillopora_meandrina_HIv1___Sc0000001	6593781	6594210	430	1188	105	0.9974747474747475	+	UCUCAACCCAGUUCCAAGAUCACACCGUUA	302	382	800	4	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6676427-6676842	Cluster_559	Pocillopora_meandrina_HIv1___Sc0000001	6676427	6676842	416	131	25	0.06870229007633588	-	CUGUUACAGCCCGGCA	81	117	6	3	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6854403-6854831	Cluster_560	Pocillopora_meandrina_HIv1___Sc0000001	6854403	6854831	429	136	38	0.007352941176470588	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	70	0	136	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6984277-6984706	Cluster_561	Pocillopora_meandrina_HIv1___Sc0000001	6984277	6984706	430	312	27	0.9967948717948718	+	GACUGGUGCAUUGCUUGUCGGCGACUCAUG	154	2	308	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:6989290-6989708	Cluster_562	Pocillopora_meandrina_HIv1___Sc0000001	6989290	6989708	419	136	60	0.8455882352941176	+	UCUGUAAACUCCGUAUUUAACAACAAAU	13	0	130	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7006571-7007371	Cluster_563	Pocillopora_meandrina_HIv1___Sc0000001	7006571	7007371	801	739	333	0.8322056833558863	+	UGAAUCGUGGGCAAAUGAUAUUCAAUGAUC	29	4	704	1	2	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7068691-7069113	Cluster_564	Pocillopora_meandrina_HIv1___Sc0000001	7068691	7069113	423	132	48	0.9924242424242424	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	19	0	129	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7069395-7070083	Cluster_565	Pocillopora_meandrina_HIv1___Sc0000001	7069395	7070083	689	655	323	0.8091603053435115	+	UAUGACGUUCCAGAAUCUUUGACAAAA	40	5	618	7	6	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7070254-7070997	Cluster_566	Pocillopora_meandrina_HIv1___Sc0000001	7070254	7070997	744	864	328	0.9502314814814815	+	UCCGUGACACAACGACUUUGCCUUGCUU	118	10	838	3	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7075985-7076412	Cluster_567	Pocillopora_meandrina_HIv1___Sc0000001	7075985	7076412	428	114	16	0.017543859649122806	-	UACCAAGGUCUUGUAGUCUAGUACAACU	68	2	112	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7279601-7280016	Cluster_568	Pocillopora_meandrina_HIv1___Sc0000001	7279601	7280016	416	131	57	0.31297709923664124	.	GUAGAAGCAAGAGCUUGAGACA	22	70	11	13	26	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7467089-7467518	Cluster_569	Pocillopora_meandrina_HIv1___Sc0000001	7467089	7467518	430	399	98	0.05012531328320802	-	UUGAACGUCACUGUCUGUCGGCGAUACGGA	63	17	360	3	10	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7469649-7470757	Cluster_570	Pocillopora_meandrina_HIv1___Sc0000001	7469649	7470757	1109	1916	568	0.5125260960334029	.	ACAUGACAAAACUACGAGCUUAGAAGA	303	5	1663	12	9	66	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7472170-7472918	Cluster_571	Pocillopora_meandrina_HIv1___Sc0000001	7472170	7472918	749	950	401	0.29789473684210527	.	UUUUCUGUAGGCAUCUUGCAAUUAAACUGA	35	14	834	4	8	6	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7487307-7488525	Cluster_572	Pocillopora_meandrina_HIv1___Sc0000001	7487307	7488525	1219	1307	445	0.441469013006886	.	UUGACGAGUAUGGUGUACGAAAGAUGAGU	141	14	1202	16	13	15	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7491752-7493065	Cluster_573	Pocillopora_meandrina_HIv1___Sc0000001	7491752	7493065	1314	6160	1679	0.30616883116883115	.	AGGUGUAGAAUGUAAAAAGCAGCA	186	128	4929	67	52	289	695	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7494167-7495444	Cluster_574	Pocillopora_meandrina_HIv1___Sc0000001	7494167	7495444	1278	1914	882	0.7565308254963428	.	UAAUCUCACUAGUGUCAAAGUAAACUCUGG	52	46	1713	16	13	33	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7498877-7499298	Cluster_575	Pocillopora_meandrina_HIv1___Sc0000001	7498877	7499298	422	83	35	0.04819277108433735	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	29	0	81	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7508339-7508768	Cluster_576	Pocillopora_meandrina_HIv1___Sc0000001	7508339	7508768	430	607	201	0.08237232289950576	-	UAACGUAGUGGUAUCCAUUGAACAAGUUC	93	4	528	1	1	3	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7509029-7510079	Cluster_577	Pocillopora_meandrina_HIv1___Sc0000001	7509029	7510079	1051	781	382	0.25224071702944945	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	31	15	721	5	5	21	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7512926-7513351	Cluster_578	Pocillopora_meandrina_HIv1___Sc0000001	7512926	7513351	426	169	87	0.0	-	UGAGCUACUGUGUGACGCCGGUCUUACUUU	15	0	164	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7520230-7520819	Cluster_579	Pocillopora_meandrina_HIv1___Sc0000001	7520230	7520819	590	12267	467	0.05380288579114698	-	UAAAAUCGUUUCAAUGCUCUGAGCACUGUU	2472	15	12022	17	12	128	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7521099-7521526	Cluster_580	Pocillopora_meandrina_HIv1___Sc0000001	7521099	7521526	428	152	52	0.19078947368421054	-	UCAGAAUUGGUGGGCUCAGUGGACGGCC	27	2	136	0	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7522572-7523020	Cluster_581	Pocillopora_meandrina_HIv1___Sc0000001	7522572	7523020	449	550	138	0.0036363636363636364	-	UCCGAUUUAAAAGAUUCUUUGUUUCCAGC	106	0	508	1	17	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7523238-7523895	Cluster_582	Pocillopora_meandrina_HIv1___Sc0000001	7523238	7523895	658	867	231	0.029988465974625143	-	UAGAAUAAAGCUGAUCUGCAGUUACUGC	183	19	824	1	6	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7529408-7530207	Cluster_583	Pocillopora_meandrina_HIv1___Sc0000001	7529408	7530207	800	1964	340	0.002036659877800407	-	UAAUGAUUUCCGUUCUAGCAGCCUCUGC	322	10	1920	5	2	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7533043-7534283	Cluster_584	Pocillopora_meandrina_HIv1___Sc0000001	7533043	7534283	1241	11115	1510	0.028879892037786774	-	UCUGACUGACUAACAGGAUAUCUGCUUC	746	52	10763	21	32	82	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7538234-7538725	Cluster_585	Pocillopora_meandrina_HIv1___Sc0000001	7538234	7538725	492	890	178	0.021348314606741574	-	UGUAACUCUAAACUUUGGAGCUUGGAUG	137	117	721	1	7	3	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7538914-7539330	Cluster_586	Pocillopora_meandrina_HIv1___Sc0000001	7538914	7539330	417	162	59	0.030864197530864196	-	UGAUAUAAUUAUGAAGGCUUUUGAAUGA	29	2	156	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7540437-7540867	Cluster_587	Pocillopora_meandrina_HIv1___Sc0000001	7540437	7540867	431	201	75	0.004975124378109453	-	UCGUUCGAUUUGGGGGAAAUGGAUCCUGC	32	1	194	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7540920-7541875	Cluster_588	Pocillopora_meandrina_HIv1___Sc0000001	7540920	7541875	956	626	276	0.01437699680511182	-	UGUUCUAACUGUUAUCUUUGUGUUCCAGCU	53	11	601	0	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7542065-7542484	Cluster_589	Pocillopora_meandrina_HIv1___Sc0000001	7542065	7542484	420	147	75	0.013605442176870748	-	UCGGAAAAUUGUAUGUCGUGUGUGCCCUGU	16	5	137	1	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7542514-7542923	Cluster_590	Pocillopora_meandrina_HIv1___Sc0000001	7542514	7542923	410	296	141	0.010135135135135136	-	UGCUUUUGGUUUGUGGAUGGAACUGUCCGC	37	0	287	0	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7544193-7544782	Cluster_591	Pocillopora_meandrina_HIv1___Sc0000001	7544193	7544782	590	493	140	0.012170385395537525	-	UAAUCUCUGGUUCACUUUAGAUAUCACAUG	191	7	479	0	0	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7546753-7547162	Cluster_592	Pocillopora_meandrina_HIv1___Sc0000001	7546753	7547162	410	84	28	0.08333333333333333	-	UGUUCCAGUUGUACAUCAGAUACCUCU	16	0	76	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7550208-7550617	Cluster_593	Pocillopora_meandrina_HIv1___Sc0000001	7550208	7550617	410	205	92	0.05365853658536585	-	UGAAGAAACGAGACUCGUUUAACGAAACGA	34	4	187	0	3	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7558282-7559613	Cluster_594	Pocillopora_meandrina_HIv1___Sc0000001	7558282	7559613	1332	1694	646	0.0035419126328217238	-	UAGAAAUGACGACUGCAGUUUUUACAUGC	64	30	1626	6	7	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7559618-7560418	Cluster_595	Pocillopora_meandrina_HIv1___Sc0000001	7559618	7560418	801	724	256	0.0055248618784530384	-	UCUUCCAUGACCAACCACA	64	110	595	6	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7560573-7561712	Cluster_596	Pocillopora_meandrina_HIv1___Sc0000001	7560573	7561712	1140	1721	330	0.012783265543288786	-	UCCAUCUUUCCGUCUUUGGUUCACCUC	500	79	1622	4	1	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7562095-7562863	Cluster_597	Pocillopora_meandrina_HIv1___Sc0000001	7562095	7562863	769	936	368	0.005341880341880342	-	UGAACUGUGAAAUGUGUAUUAAACACCCUAC	91	24	882	5	5	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7563001-7563428	Cluster_598	Pocillopora_meandrina_HIv1___Sc0000001	7563001	7563428	428	143	52	0.0	-	UUUUACAUUUUCCCUUCUCCUUCCAGUUU	23	4	133	2	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7564613-7565042	Cluster_599	Pocillopora_meandrina_HIv1___Sc0000001	7564613	7565042	430	211	58	0.0	-	AGUCCAUCCAAACUUUUGUAACUUAAUUUU	80	0	206	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7566258-7566686	Cluster_600	Pocillopora_meandrina_HIv1___Sc0000001	7566258	7566686	429	148	60	0.0	-	UGUAAAUUGUGUGGAAGGUCUAGCAUUUGUU	25	4	141	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7569380-7569807	Cluster_601	Pocillopora_meandrina_HIv1___Sc0000001	7569380	7569807	428	222	101	0.0	-	UUUGAGCUGAGAACUUUUUAAUUCUGUU	28	12	202	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7570178-7572160	Cluster_602	Pocillopora_meandrina_HIv1___Sc0000001	7570178	7572160	1983	6984	1786	0.22121993127147765	.	UGGACGUACAUGCAGGAUUUGUCAUAC	806	86	6125	38	60	189	486	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7573577-7574770	Cluster_603	Pocillopora_meandrina_HIv1___Sc0000001	7573577	7574770	1194	3199	889	0.7602375742419506	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	529	38	2876	14	137	47	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7577524-7577952	Cluster_604	Pocillopora_meandrina_HIv1___Sc0000001	7577524	7577952	429	139	21	0.007194244604316547	-	UUGACUGACAGAAGAUCUGGAAACUGA	46	0	135	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7578201-7579791	Cluster_605	Pocillopora_meandrina_HIv1___Sc0000001	7578201	7579791	1591	21344	2992	0.1459895052473763	-	UACUUUCUGAUUGACUUGGAGUGUGGGG	1148	1173	18336	133	145	501	1056	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7592653-7593080	Cluster_606	Pocillopora_meandrina_HIv1___Sc0000001	7592653	7593080	428	149	55	0.9731543624161074	+	UUGUUAACUUUGUCUACCAGAUCUUAUC	21	14	128	2	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7595171-7595581	Cluster_607	Pocillopora_meandrina_HIv1___Sc0000001	7595171	7595581	411	157	84	0.554140127388535	.	CACCCGGUCAAUUUUGCGUCAAAAAUAAUUU	11	17	119	4	3	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:7909734-7910162	Cluster_608	Pocillopora_meandrina_HIv1___Sc0000001	7909734	7910162	429	187	99	0.9893048128342246	+	AUCUGAACAAAAGAAAAGACACCAAGGAG	42	23	132	8	8	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8154885-8155313	Cluster_609	Pocillopora_meandrina_HIv1___Sc0000001	8154885	8155313	429	220	67	0.9681818181818181	+	UUGGAUUUAGGUGAGCUUGAAGAUUGUA	33	7	209	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8158124-8159082	Cluster_610	Pocillopora_meandrina_HIv1___Sc0000001	8158124	8159082	959	649	262	0.7303543913713405	.	UCACACUUUUGUCUCGCGAGUCGUUGGCA	53	16	580	7	14	3	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8214007-8214547	Cluster_611	Pocillopora_meandrina_HIv1___Sc0000001	8214007	8214547	541	573	153	0.7609075043630017	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	170	2	550	7	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8221612-8222035	Cluster_612	Pocillopora_meandrina_HIv1___Sc0000001	8221612	8222035	424	273	64	0.06227106227106227	-	AUGGACAGAACACAGGAAGUGCU	60	8	96	3	9	128	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8242888-8243317	Cluster_613	Pocillopora_meandrina_HIv1___Sc0000001	8242888	8243317	430	295	107	0.8949152542372881	+	UCAGCAAUACCUAAUUCUUCGUGUAGACGU	52	0	267	1	0	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8270842-8271268	Cluster_614	Pocillopora_meandrina_HIv1___Sc0000001	8270842	8271268	427	191	99	0.09424083769633508	-	UAUUCCAAGAUUGGCCGUACCAGAGACA	19	1	183	1	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8286803-8289064	Cluster_615	Pocillopora_meandrina_HIv1___Sc0000001	8286803	8289064	2262	8886	2418	0.06279540850776502	-	UAUGUACGAUUUUAACUGGAAGAAACGUUU	497	161	8349	43	77	102	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8293722-8294136	Cluster_616	Pocillopora_meandrina_HIv1___Sc0000001	8293722	8294136	415	132	77	0.007575757575757576	-	UAUGUCACUGGAUCUAGUCGCUCGCACACU	10	2	124	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8294312-8294868	Cluster_617	Pocillopora_meandrina_HIv1___Sc0000001	8294312	8294868	557	484	200	0.01859504132231405	-	UGGAACCCUUUACGAUUGACAACAUCGUUU	60	4	462	1	2	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8295500-8295906	Cluster_618	Pocillopora_meandrina_HIv1___Sc0000001	8295500	8295906	407	229	120	0.537117903930131	.	UGUUCUAUUGCCACUCUUGUUCUUUUGU	11	3	178	1	2	4	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8306212-8307604	Cluster_619	Pocillopora_meandrina_HIv1___Sc0000001	8306212	8307604	1393	2546	700	0.05970149253731343	-	UGAUUAUUGCGUCUUCAGUGACUUCUGA	263	32	2376	10	35	22	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8320154-8320577	Cluster_620	Pocillopora_meandrina_HIv1___Sc0000001	8320154	8320577	424	73	5	0.0	-	UAACCCGAGAACUGACACGUGAGUAGUC	53	0	66	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8324680-8325107	Cluster_621	Pocillopora_meandrina_HIv1___Sc0000001	8324680	8325107	428	96	11	0.0	-	UAACCCGAGAACUGACACGUGAGUAGUC	60	1	84	0	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8337585-8338062	Cluster_622	Pocillopora_meandrina_HIv1___Sc0000001	8337585	8338062	478	272	156	0.18382352941176472	-	UGAUUUGUACGACCCACUCCUGUUAAC	13	18	216	4	3	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8338134-8338821	Cluster_623	Pocillopora_meandrina_HIv1___Sc0000001	8338134	8338821	688	475	238	0.11789473684210526	-	UAAUCAUCUUCGAGUCGCGGAUACCUGA	55	13	409	9	4	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8340034-8340819	Cluster_624	Pocillopora_meandrina_HIv1___Sc0000001	8340034	8340819	786	1905	487	0.015748031496062992	-	UGCAUUCUCAAGUCGUGCUCUGUAACGG	146	31	1749	8	11	16	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8340967-8341392	Cluster_625	Pocillopora_meandrina_HIv1___Sc0000001	8340967	8341392	426	177	73	0.022598870056497175	-	UCAGACGUGAACUGUGGACCAUUAUC	21	2	167	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8343194-8343622	Cluster_626	Pocillopora_meandrina_HIv1___Sc0000001	8343194	8343622	429	192	45	0.0	-	UAAAGCUUGAACCUUCCAACACGUCCGACA	46	3	168	5	7	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8346606-8347331	Cluster_627	Pocillopora_meandrina_HIv1___Sc0000001	8346606	8347331	726	758	309	0.262532981530343	.	UGAGAUUUCUGCAUUUCCUCAAGCACGU	71	13	645	7	10	34	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8351582-8352234	Cluster_628	Pocillopora_meandrina_HIv1___Sc0000001	8351582	8352234	653	308	101	0.003246753246753247	-	CCAGUAUCUGUUUGUUUAGUUCUAGAAUAUC	54	2	293	0	3	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8355699-8356143	Cluster_629	Pocillopora_meandrina_HIv1___Sc0000001	8355699	8356143	445	282	119	0.014184397163120567	-	UUGGCGUGUUUAAGUACUUCUGAUCUUGAC	57	9	270	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8359679-8360122	Cluster_630	Pocillopora_meandrina_HIv1___Sc0000001	8359679	8360122	444	438	130	0.3789954337899543	.	UGAUUCUUGUAAAAGCUUACCAGCUCCAUU	37	3	300	1	4	52	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8364196-8364619	Cluster_631	Pocillopora_meandrina_HIv1___Sc0000001	8364196	8364619	424	92	37	0.010869565217391304	-	UAUUCACACGUGUUAUCUCGUCGCUCGAUU	15	0	92	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8370312-8370827	Cluster_632	Pocillopora_meandrina_HIv1___Sc0000001	8370312	8370827	516	774	208	0.6059431524547804	.	UGGAUUAUCAACAAUUGGAAAGAAGGACA	102	11	692	3	6	17	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8371244-8372173	Cluster_633	Pocillopora_meandrina_HIv1___Sc0000001	8371244	8372173	930	1274	503	0.00706436420722135	-	UGGUCUUUCUCGUCUGCUUUCUCGAUGGC	73	26	1175	7	3	40	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8373184-8373869	Cluster_634	Pocillopora_meandrina_HIv1___Sc0000001	8373184	8373869	686	730	237	0.0013698630136986301	-	UGAGUUUGUAGAAGCAAUUUGCCAUCUGC	67	11	703	1	5	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8384652-8385719	Cluster_635	Pocillopora_meandrina_HIv1___Sc0000001	8384652	8385719	1068	884	274	0.004524886877828055	-	UUCUUGUAUUCGAAGGCUGGCUGCAACUGC	139	12	846	4	5	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8386118-8387061	Cluster_636	Pocillopora_meandrina_HIv1___Sc0000001	8386118	8387061	944	7609	854	0.003942699434879748	-	UCGACAUCUUUUUGUGUGGGUCUACUGC	733	93	7404	12	12	16	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8394040-8394752	Cluster_637	Pocillopora_meandrina_HIv1___Sc0000001	8394040	8394752	713	615	165	0.0016260162601626016	-	UAUCUUCUCGAGACUCAGGAAUUCCAGUGA	112	11	589	4	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8400205-8400676	Cluster_638	Pocillopora_meandrina_HIv1___Sc0000001	8400205	8400676	472	403	119	0.3225806451612903	.	CGUGUGAAUAUAGUAGCGUUGAUU	79	7	270	5	1	5	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8401927-8402354	Cluster_639	Pocillopora_meandrina_HIv1___Sc0000001	8401927	8402354	428	257	126	0.007782101167315175	-	UGUAUCAAAGGACUUCUUCCAGGUGGGAUA	32	11	241	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8403550-8403979	Cluster_640	Pocillopora_meandrina_HIv1___Sc0000001	8403550	8403979	430	158	69	0.0	-	UGUGUCUUUGCCACUAGAUGACUGAUGGUU	29	2	151	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8406664-8407092	Cluster_641	Pocillopora_meandrina_HIv1___Sc0000001	8406664	8407092	429	257	95	0.0	-	UGUUUUGUUCUGUGUCGCAUUCUGCAGGC	76	6	249	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8409239-8409797	Cluster_642	Pocillopora_meandrina_HIv1___Sc0000001	8409239	8409797	559	527	224	0.0018975332068311196	-	UGUGAUCACCACUGUCAAAGACAUAUUGG	28	4	516	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8410876-8411304	Cluster_643	Pocillopora_meandrina_HIv1___Sc0000001	8410876	8411304	429	348	169	0.0028735632183908046	-	UCUUCCUUAAUUAUUUUCAGACUGGUCCUA	22	33	283	4	1	4	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8411850-8412347	Cluster_644	Pocillopora_meandrina_HIv1___Sc0000001	8411850	8412347	498	380	139	0.3684210526315789	.	GACCAAAAAAAGAAGAAC	30	143	212	13	6	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8412512-8412917	Cluster_645	Pocillopora_meandrina_HIv1___Sc0000001	8412512	8412917	406	131	72	0.0	-	UGCUACGUUUGACUGACGUUUAUUGGGC	28	6	122	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8413277-8413706	Cluster_646	Pocillopora_meandrina_HIv1___Sc0000001	8413277	8413706	430	310	72	0.2	.	UGUUACGAAUCAAGAUCUAUUAAGCUCAAU	123	5	305	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8417245-8418232	Cluster_647	Pocillopora_meandrina_HIv1___Sc0000001	8417245	8418232	988	3336	676	0.04526378896882494	-	UUUUCAAGGAGGAUGUAUCCACUGUCGUU	419	54	3109	17	52	44	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8418536-8418954	Cluster_648	Pocillopora_meandrina_HIv1___Sc0000001	8418536	8418954	419	194	48	0.6701030927835051	.	UCUUUCCCAUUAAUUGUGAUUUUGUUCAUU	38	0	182	1	1	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8419704-8420738	Cluster_649	Pocillopora_meandrina_HIv1___Sc0000001	8419704	8420738	1035	481	217	0.04365904365904366	-	UCCGAUCACGCUUGAAGUAUUUCAGAAAC	46	14	432	4	10	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8525801-8526215	Cluster_650	Pocillopora_meandrina_HIv1___Sc0000001	8525801	8526215	415	103	19	0.009708737864077669	-	UAUAUCAGAACGGAAU	22	103	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8667430-8667854	Cluster_651	Pocillopora_meandrina_HIv1___Sc0000001	8667430	8667854	425	93	33	0.956989247311828	+	UGUGUAGAUAUGUCUUUUGGACAGGA	26	0	91	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8680444-8680874	Cluster_652	Pocillopora_meandrina_HIv1___Sc0000001	8680444	8680874	431	9631	400	0.0006229882670543038	-	GCGUUGGUGGUAUAGUGGUGAGCAUAGCU	3353	248	9159	24	37	120	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8689948-8690361	Cluster_653	Pocillopora_meandrina_HIv1___Sc0000001	8689948	8690361	414	115	56	0.0	-	GCCUCUGUAGCGUAAUGGA	35	78	16	9	5	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8708158-8709110	Cluster_654	Pocillopora_meandrina_HIv1___Sc0000001	8708158	8709110	953	11863	526	0.9905588805529798	+	UGACGUAUCUCUUCCCCGGGCUAUUGAGC	2923	193	11340	62	143	56	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8726443-8726870	Cluster_655	Pocillopora_meandrina_HIv1___Sc0000001	8726443	8726870	428	175	51	0.02857142857142857	-	UGAGUACACUGAUCAGUCGAAUACUGGC	42	9	164	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8740729-8741768	Cluster_656	Pocillopora_meandrina_HIv1___Sc0000001	8740729	8741768	1040	1546	280	0.009055627425614488	-	UCGGUUCCAUGAAUUCAGACAGUUUUG	355	28	1481	9	2	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8744793-8745221	Cluster_657	Pocillopora_meandrina_HIv1___Sc0000001	8744793	8745221	429	147	73	0.006802721088435374	-	UGUACAUCUUCCUGUUGGACACCCUGUUCAC	19	3	140	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8796864-8797286	Cluster_658	Pocillopora_meandrina_HIv1___Sc0000001	8796864	8797286	423	120	40	0.11666666666666667	-	UUCGCGUCUGAAGCUGUUAGAGU	45	13	13	2	16	73	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8814857-8815264	Cluster_659	Pocillopora_meandrina_HIv1___Sc0000001	8814857	8815264	408	104	54	0.0	-	UUGAACUCGACCCAGUCA	11	17	85	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8852221-8852908	Cluster_660	Pocillopora_meandrina_HIv1___Sc0000001	8852221	8852908	688	569	195	0.007029876977152899	-	UCACAAACUGGAAAGUUAAGGGUGCAGGAG	87	6	552	1	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8852947-8853376	Cluster_661	Pocillopora_meandrina_HIv1___Sc0000001	8852947	8853376	430	529	99	0.04158790170132325	-	UAAAGCAAGACAACUAACUAGAAUGCGGUU	290	33	459	4	4	6	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8857011-8857439	Cluster_662	Pocillopora_meandrina_HIv1___Sc0000001	8857011	8857439	429	125	43	0.024	-	UCCGAACUUUCCUGGUGUUGAUAGCCACA	26	4	120	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8858960-8859384	Cluster_663	Pocillopora_meandrina_HIv1___Sc0000001	8858960	8859384	425	147	52	0.0	-	UGCCAACGAUCUUCGGUCACGGGGAGCCA	37	0	141	1	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8861034-8861477	Cluster_664	Pocillopora_meandrina_HIv1___Sc0000001	8861034	8861477	444	409	141	0.4718826405867971	.	UCCGUAAUCUUGAAAUAUCUGAAUUCGCA	64	5	377	10	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8863493-8864217	Cluster_665	Pocillopora_meandrina_HIv1___Sc0000001	8863493	8864217	725	421	197	0.0665083135391924	-	UGAUGAUCUUGAAUUUUGGCGCUCCCAGA	35	10	395	0	1	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8867678-8868103	Cluster_666	Pocillopora_meandrina_HIv1___Sc0000001	8867678	8868103	426	132	52	0.007575757575757576	-	UGAGUAAAGCUUCUGAUAUGAUAUGGC	29	4	122	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:8870437-8870956	Cluster_667	Pocillopora_meandrina_HIv1___Sc0000001	8870437	8870956	520	407	132	0.002457002457002457	-	CAUGUGCUGAUUUCUGGUCUUAAAAUGGU	106	5	397	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9161078-9161503	Cluster_668	Pocillopora_meandrina_HIv1___Sc0000001	9161078	9161503	426	107	49	0.9439252336448598	+	UGAUUACACUGUCAAAAAUUCCUGCGA	25	9	81	1	4	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9243354-9243768	Cluster_669	Pocillopora_meandrina_HIv1___Sc0000001	9243354	9243768	415	429	11	0.0	-	GUUUCUGUAGUGUAG	309	429	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9449473-9449888	Cluster_670	Pocillopora_meandrina_HIv1___Sc0000001	9449473	9449888	416	116	9	0.9827586206896551	+	CGGGGUGCUGUAGUGU	34	115	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9474068-9474483	Cluster_671	Pocillopora_meandrina_HIv1___Sc0000001	9474068	9474483	416	142	17	1.0	+	CCCACUUCUGACACCA	72	142	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9559277-9559692	Cluster_672	Pocillopora_meandrina_HIv1___Sc0000001	9559277	9559692	416	92	10	0.010869565217391304	-	UCCCGGCCAACGCACCA	54	92	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9727492-9728054	Cluster_673	Pocillopora_meandrina_HIv1___Sc0000001	9727492	9728054	563	384	194	0.0	-	UAAAAAGCCUGGACCGAGCAAUAUGAAAUU	18	4	362	4	9	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9729005-9729434	Cluster_674	Pocillopora_meandrina_HIv1___Sc0000001	9729005	9729434	430	436	156	0.0022935779816513763	-	UGUUUCCAAUCGAUUCAGCGUGGCUGUUUU	59	7	414	2	2	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9743290-9743705	Cluster_675	Pocillopora_meandrina_HIv1___Sc0000001	9743290	9743705	416	251	26	0.00398406374501992	-	AGGGUGCUGUCGGCU	144	250	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9769282-9770001	Cluster_676	Pocillopora_meandrina_HIv1___Sc0000001	9769282	9770001	720	341	176	0.9736070381231672	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	45	2	323	2	2	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9819040-9819870	Cluster_677	Pocillopora_meandrina_HIv1___Sc0000001	9819040	9819870	831	1589	146	0.013845185651353053	-	UUCAUGCUCUUGUUGUUCGACUGAACAAA	465	36	1530	2	6	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9828737-9829165	Cluster_678	Pocillopora_meandrina_HIv1___Sc0000001	9828737	9829165	429	133	52	0.03759398496240601	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	19	0	130	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:9992821-9993242	Cluster_679	Pocillopora_meandrina_HIv1___Sc0000001	9992821	9993242	422	119	54	0.8403361344537815	+	UAACAGCUUAAGACGCGAACGAG	16	12	26	6	9	44	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10364319-10364733	Cluster_680	Pocillopora_meandrina_HIv1___Sc0000001	10364319	10364733	415	158	32	0.006329113924050633	-	GAAUCGGCCGCGGAU	59	144	7	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10374967-10375503	Cluster_681	Pocillopora_meandrina_HIv1___Sc0000001	10374967	10375503	537	3688	560	0.9962039045553145	+	CACUGGAUCGAGGGAAACCAUGAAUUU	518	751	1701	113	535	359	229	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10500535-10500944	Cluster_682	Pocillopora_meandrina_HIv1___Sc0000001	10500535	10500944	410	94	32	0.23404255319148937	.	UGAUAACUUGUACGAGUACCGUUUACA	37	5	77	0	1	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10501153-10501564	Cluster_683	Pocillopora_meandrina_HIv1___Sc0000001	10501153	10501564	412	153	83	0.738562091503268	.	UUCUUUCCUUUGGUGCCUUUCUAUGGUU	12	5	120	4	5	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10532266-10532801	Cluster_684	Pocillopora_meandrina_HIv1___Sc0000001	10532266	10532801	536	1464	247	0.040983606557377046	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	287	29	1397	6	7	4	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10534945-10536306	Cluster_685	Pocillopora_meandrina_HIv1___Sc0000001	10534945	10536306	1362	5015	911	0.08594217347956132	-	UGGGAAACGGCUGUACUCGUCUAUGACG	616	29	4676	11	54	77	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10536547-10536974	Cluster_686	Pocillopora_meandrina_HIv1___Sc0000001	10536547	10536974	428	146	54	0.0410958904109589	-	UGAUUAAGAACGAUAAACUGGAACGUG	34	1	141	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10605374-10605803	Cluster_687	Pocillopora_meandrina_HIv1___Sc0000001	10605374	10605803	430	313	103	0.5942492012779552	.	UGCAUCUUCACUGCCACCUACAUUCUGUGU	78	3	265	2	0	2	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10674379-10675151	Cluster_688	Pocillopora_meandrina_HIv1___Sc0000001	10674379	10675151	773	921	238	0.08903365906623235	-	UGCUGUAUUUAAUUCUUCGAUCUUCUUAC	125	24	870	1	9	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10678513-10678939	Cluster_689	Pocillopora_meandrina_HIv1___Sc0000001	10678513	10678939	427	338	111	0.05029585798816568	-	UAAGACAUUGGCAUACUUGACAUACA	60	4	321	3	0	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10704605-10705167	Cluster_690	Pocillopora_meandrina_HIv1___Sc0000001	10704605	10705167	563	2673	386	0.349420127197905	.	UAUUUCAUCUUUGUCCACUGCGUGCCAA	443	15	2538	6	11	29	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10705187-10705792	Cluster_691	Pocillopora_meandrina_HIv1___Sc0000001	10705187	10705792	606	722	347	0.20637119113573407	.	UCCUUGCCUGUAUAAACAUUUAUGUCUAAC	31	10	638	1	3	42	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10706073-10706594	Cluster_692	Pocillopora_meandrina_HIv1___Sc0000001	10706073	10706594	522	486	227	0.11316872427983539	-	UCAUACAAAUAGUCUUGGAGGGUGUGGU	19	15	453	2	4	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10706958-10707451	Cluster_693	Pocillopora_meandrina_HIv1___Sc0000001	10706958	10707451	494	548	189	0.07664233576642336	-	UGAAUCCGUAGAAAAUGCUUUGCUGAGU	49	11	500	9	0	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10709456-10709885	Cluster_694	Pocillopora_meandrina_HIv1___Sc0000001	10709456	10709885	430	251	70	0.00398406374501992	-	UGCGUCGAUUUGUUCAACCCAAUGGAGAGC	60	0	249	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10737769-10739506	Cluster_695	Pocillopora_meandrina_HIv1___Sc0000001	10737769	10739506	1738	2671	1068	0.04829651815799326	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	107	23	2518	15	23	47	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10743365-10744210	Cluster_696	Pocillopora_meandrina_HIv1___Sc0000001	10743365	10744210	846	848	253	0.01768867924528302	-	UGCUAACACUUGUAGUCUGACCAGCCUUU	116	9	825	0	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10744527-10745157	Cluster_697	Pocillopora_meandrina_HIv1___Sc0000001	10744527	10745157	631	379	169	0.0712401055408971	-	UCUUCUGUUUGUAAGUCUGCUCCGUCUGC	24	1	350	2	0	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10746084-10746499	Cluster_698	Pocillopora_meandrina_HIv1___Sc0000001	10746084	10746499	416	143	78	0.04195804195804196	-	UAACUCACCGUGACUUUAUACACCUUCUUU	24	6	135	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10746518-10746933	Cluster_699	Pocillopora_meandrina_HIv1___Sc0000001	10746518	10746933	416	234	150	0.042735042735042736	-	UGUGCUCUGUCAACCUGUACUGGCUUUC	8	4	206	0	1	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10747636-10748066	Cluster_700	Pocillopora_meandrina_HIv1___Sc0000001	10747636	10748066	431	290	68	0.006896551724137931	-	UAGGAUUUAUUUGAGAUGCCCGUACGCUCUU	124	3	281	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10748750-10749587	Cluster_701	Pocillopora_meandrina_HIv1___Sc0000001	10748750	10749587	838	872	245	0.9541284403669725	+	UGAUUUCGCGUGCUCAACUCCGAUAAGAGC	150	8	858	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10763282-10763715	Cluster_702	Pocillopora_meandrina_HIv1___Sc0000001	10763282	10763715	434	1338	248	0.017937219730941704	-	UAUCUUCUGUAUGAUUUGGCUCGGUUGA	259	15	1274	26	5	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10771285-10771715	Cluster_703	Pocillopora_meandrina_HIv1___Sc0000001	10771285	10771715	431	128	36	0.0078125	-	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	61	0	125	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10779541-10779965	Cluster_704	Pocillopora_meandrina_HIv1___Sc0000001	10779541	10779965	425	153	80	0.0457516339869281	-	UAACCGUAGCUCUGCUUCAAAUCUUUAACGU	18	0	146	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10783532-10784774	Cluster_705	Pocillopora_meandrina_HIv1___Sc0000001	10783532	10784774	1243	2646	786	0.30990173847316704	.	UCCGGAUCUUUUCUUGAACAAACAAAGUUU	144	17	2457	16	20	45	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10785297-10785725	Cluster_706	Pocillopora_meandrina_HIv1___Sc0000001	10785297	10785725	429	146	55	0.02054794520547945	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	20	0	144	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10789789-10790294	Cluster_707	Pocillopora_meandrina_HIv1___Sc0000001	10789789	10790294	506	1867	274	0.05570433851098018	-	UGAUUUCUGUAUUUAGUGUUGGCUGAUAC	690	6	1779	5	15	14	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10792415-10792844	Cluster_708	Pocillopora_meandrina_HIv1___Sc0000001	10792415	10792844	430	119	33	0.12605042016806722	-	UAGGAAAAGAUAUACACUACAAAGAAAAGU	62	6	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10824346-10824773	Cluster_709	Pocillopora_meandrina_HIv1___Sc0000001	10824346	10824773	428	101	42	0.9900990099009901	+	UCCUCGGUAGUAUGGUGGUGAGUAUCCC	21	21	78	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10833073-10833487	Cluster_710	Pocillopora_meandrina_HIv1___Sc0000001	10833073	10833487	415	102	9	0.0784313725490196	-	GAUGAGGCUCAUAAC	79	102	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10844844-10845261	Cluster_711	Pocillopora_meandrina_HIv1___Sc0000001	10844844	10845261	418	922	33	0.0010845986984815619	-	GUUUCUGUAGUGUAG	528	921	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10847773-10848195	Cluster_712	Pocillopora_meandrina_HIv1___Sc0000001	10847773	10848195	423	94	34	0.9787234042553191	+	GGCCUGUUGGUCUAGUGGCAUGAUUCU	39	13	77	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10853560-10853976	Cluster_713	Pocillopora_meandrina_HIv1___Sc0000001	10853560	10853976	417	237	40	0.004219409282700422	-	GGUCCGUUAGCUCAG	53	232	0	4	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10857028-10857496	Cluster_714	Pocillopora_meandrina_HIv1___Sc0000001	10857028	10857496	469	732	168	1.0	+	CGCGGGAGACCGGGGUUCGAUUCCCCG	132	69	634	4	9	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10862634-10863063	Cluster_715	Pocillopora_meandrina_HIv1___Sc0000001	10862634	10863063	430	6235	166	0.0	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	1685	2079	4134	1	2	15	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10906237-10906664	Cluster_716	Pocillopora_meandrina_HIv1___Sc0000001	10906237	10906664	428	101	32	0.0	-	UCCUCGGUAGUAUAGCGGUGAGUAUCCC	25	18	82	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:10911480-10911894	Cluster_717	Pocillopora_meandrina_HIv1___Sc0000001	10911480	10911894	415	162	12	1.0	+	GUUUCUGUAGUGUAC	133	162	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11025769-11026190	Cluster_718	Pocillopora_meandrina_HIv1___Sc0000001	11025769	11026190	422	512	70	1.0	+	UCCCGGACAGGCCCCU	101	347	3	24	97	41	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11038843-11039272	Cluster_719	Pocillopora_meandrina_HIv1___Sc0000001	11038843	11039272	430	874	97	0.009153318077803204	-	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	179	347	510	5	6	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11087414-11087828	Cluster_720	Pocillopora_meandrina_HIv1___Sc0000001	11087414	11087828	415	97	10	1.0	+	GGUCCGUUAGCUCAA	85	97	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11189266-11189692	Cluster_721	Pocillopora_meandrina_HIv1___Sc0000001	11189266	11189692	427	316	161	0.7974683544303798	.	UCAAAAUCGUAGCUUUACAGACGGCCAUU	14	10	234	14	6	17	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11198168-11198583	Cluster_722	Pocillopora_meandrina_HIv1___Sc0000001	11198168	11198583	416	27614	18	1.0	+	UUCCGAGGUCGCGGUA	27486	27613	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11270723-11271147	Cluster_723	Pocillopora_meandrina_HIv1___Sc0000001	11270723	11271147	425	305	157	0.8786885245901639	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	27	1	254	2	5	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11271522-11272459	Cluster_724	Pocillopora_meandrina_HIv1___Sc0000001	11271522	11272459	938	4028	705	0.9664846077457795	+	UGACUCGUCACUUUGUCUUGCUUAAGCA	647	15	3767	10	23	34	179	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11272901-11273308	Cluster_725	Pocillopora_meandrina_HIv1___Sc0000001	11272901	11273308	408	285	163	0.6491228070175439	.	UGAUAUUAUAGAGGAAGUAGACGG	19	6	231	2	3	13	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11273329-11274825	Cluster_726	Pocillopora_meandrina_HIv1___Sc0000001	11273329	11274825	1497	11346	944	0.9754098360655737	+	UAAGAUUUACACACUGAUCGACCAUGU	4731	60	11120	15	17	72	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11288741-11289156	Cluster_727	Pocillopora_meandrina_HIv1___Sc0000001	11288741	11289156	416	606	17	0.0016501650165016502	-	CCGGUCGUUGGGGCA	270	603	1	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11398900-11399348	Cluster_728	Pocillopora_meandrina_HIv1___Sc0000001	11398900	11399348	449	383	104	0.9843342036553525	+	UAAAGUGUAUGUCUUUCUCUGCGAUUUGC	27	10	337	1	2	25	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11431674-11432104	Cluster_729	Pocillopora_meandrina_HIv1___Sc0000001	11431674	11432104	431	295	144	0.04745762711864407	-	UGAUAACUGUACUCUUGAAAUUCAUCGAU	21	3	281	1	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11432126-11432547	Cluster_730	Pocillopora_meandrina_HIv1___Sc0000001	11432126	11432547	422	224	124	0.13839285714285715	-	UAUCCUUAAUCUUGAUGGCUCGAGACGU	17	4	212	0	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11568580-11568995	Cluster_731	Pocillopora_meandrina_HIv1___Sc0000001	11568580	11568995	416	99	61	0.9292929292929293	+	AAGGGUGAAAGGGCUGACGU	8	54	1	26	10	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11620987-11621590	Cluster_732	Pocillopora_meandrina_HIv1___Sc0000001	11620987	11621590	604	769	278	0.6801040312093628	.	UACGCCGAGUAAUUUUGCAUGCUGGACAACC	64	9	672	7	15	20	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11725732-11726205	Cluster_733	Pocillopora_meandrina_HIv1___Sc0000001	11725732	11726205	474	11637	634	0.0005155968032998196	-	UCGACUCCCGGUAUGGGAACCA	4522	1622	1768	2592	4750	492	413	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11733488-11733917	Cluster_734	Pocillopora_meandrina_HIv1___Sc0000001	11733488	11733917	430	159	77	0.050314465408805034	-	UGUUUACUUUCUUUACAACUUCGGAUACGGG	23	0	152	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11757170-11757575	Cluster_735	Pocillopora_meandrina_HIv1___Sc0000001	11757170	11757575	406	132	80	0.23484848484848486	.	UGAAAAACUGUGACCGAGGUA	12	70	9	33	15	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11768477-11768892	Cluster_736	Pocillopora_meandrina_HIv1___Sc0000001	11768477	11768892	416	119	8	1.0	+	CGGAAGGGGAAAGGAA	43	119	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:11842953-11843381	Cluster_737	Pocillopora_meandrina_HIv1___Sc0000001	11842953	11843381	429	247	129	0.7975708502024291	.	UGAUUUUCAUAUAAUCCUUGACCCUGA	18	9	196	6	14	18	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12103182-12104139	Cluster_738	Pocillopora_meandrina_HIv1___Sc0000001	12103182	12104139	958	678	300	0.8952802359882006	+	UGUGUUCAGUGUCACUAGGUCUUUUAC	42	22	632	3	1	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12104175-12104915	Cluster_739	Pocillopora_meandrina_HIv1___Sc0000001	12104175	12104915	741	5274	441	0.9852104664391353	+	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	2909	28	5132	8	36	34	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12266638-12267131	Cluster_740	Pocillopora_meandrina_HIv1___Sc0000001	12266638	12267131	494	749	226	0.0534045393858478	-	UGAGUAAAUUUUCUUUGAUGGUCGUCGA	65	10	710	1	5	5	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12269285-12269844	Cluster_741	Pocillopora_meandrina_HIv1___Sc0000001	12269285	12269844	560	443	195	0.05417607223476298	-	UAGGUGUUAUACUGUCUCUUGAUUUGG	41	37	366	5	10	22	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12356138-12357358	Cluster_742	Pocillopora_meandrina_HIv1___Sc0000001	12356138	12357358	1221	2174	722	0.125114995400184	-	UGAUUACAGUGGCCUUCGAUGCCUGCAGGGC	154	33	1972	23	30	57	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12435335-12435765	Cluster_743	Pocillopora_meandrina_HIv1___Sc0000001	12435335	12435765	431	294	137	0.9489795918367347	+	UUGGGUACUGGUACACUGGGAUCAUC	23	14	256	1	5	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12435828-12436321	Cluster_744	Pocillopora_meandrina_HIv1___Sc0000001	12435828	12436321	494	1121	243	0.840321141837645	+	UAAUGGGAAAACGAGAACAGCGUG	125	20	586	25	16	127	347	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12460759-12461252	Cluster_745	Pocillopora_meandrina_HIv1___Sc0000001	12460759	12461252	494	261	116	0.05747126436781609	-	UGGACAAACAGCAAUAUCACUACAAAGCUU	25	8	234	4	3	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12562726-12563322	Cluster_746	Pocillopora_meandrina_HIv1___Sc0000001	12562726	12563322	597	5584	521	0.0037607449856733523	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	808	14	5522	4	7	10	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12575043-12575457	Cluster_747	Pocillopora_meandrina_HIv1___Sc0000001	12575043	12575457	415	132	50	1.0	+	GUGCUGUAACGAUAA	33	56	62	3	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12578214-12578660	Cluster_748	Pocillopora_meandrina_HIv1___Sc0000001	12578214	12578660	447	372	96	0.5295698924731183	.	UGUCCACCCCCCACCGGCUGUC	61	27	245	16	68	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12716207-12718189	Cluster_749	Pocillopora_meandrina_HIv1___Sc0000001	12716207	12718189	1983	4722	1490	0.22342227869546802	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	232	99	3973	43	35	143	429	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12719606-12720798	Cluster_750	Pocillopora_meandrina_HIv1___Sc0000001	12719606	12720798	1193	3107	855	0.7483102671387191	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	477	35	2791	16	140	45	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12727790-12728205	Cluster_751	Pocillopora_meandrina_HIv1___Sc0000001	12727790	12728205	416	141	21	1.0	+	AGUGUGCGCUUAACU	38	141	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12750169-12750597	Cluster_752	Pocillopora_meandrina_HIv1___Sc0000001	12750169	12750597	429	84	23	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	34	0	83	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12752862-12753271	Cluster_753	Pocillopora_meandrina_HIv1___Sc0000001	12752862	12753271	410	89	49	0.25842696629213485	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	13	1	83	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12754673-12755102	Cluster_754	Pocillopora_meandrina_HIv1___Sc0000001	12754673	12755102	430	293	33	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	101	0	293	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12800572-12801009	Cluster_755	Pocillopora_meandrina_HIv1___Sc0000001	12800572	12801009	438	377	186	0.8859416445623343	+	UGAGUUGUCGUGAAGCGUGUGCAGGCAC	20	12	343	0	1	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12867780-12868303	Cluster_756	Pocillopora_meandrina_HIv1___Sc0000001	12867780	12868303	524	1939	379	0.22021660649819494	.	UAGGAUAUAUCACUUGCGUAAUUUACAACA	283	90	1710	19	52	23	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12872949-12873376	Cluster_757	Pocillopora_meandrina_HIv1___Sc0000001	12872949	12873376	428	128	38	0.9453125	+	GUGGGAUAGAGCCUUGGAAUUUUGGACC	35	4	123	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12925240-12925665	Cluster_758	Pocillopora_meandrina_HIv1___Sc0000001	12925240	12925665	426	95	20	0.968421052631579	+	UACCAUAGAACUUUCCGAGACAUUUC	46	1	90	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:12938320-12938735	Cluster_759	Pocillopora_meandrina_HIv1___Sc0000001	12938320	12938735	416	312	40	0.9967948717948718	+	CCACGUUGGGCGCCA	145	300	12	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13091378-13091792	Cluster_760	Pocillopora_meandrina_HIv1___Sc0000001	13091378	13091792	415	97	29	0.10309278350515463	-	GGUGCGCUCUCGACG	42	93	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13141983-13142410	Cluster_761	Pocillopora_meandrina_HIv1___Sc0000001	13141983	13142410	428	103	8	1.0	+	UACCAAGGUCUUGUAGUCUAGUACAACU	63	0	103	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13144672-13145098	Cluster_762	Pocillopora_meandrina_HIv1___Sc0000001	13144672	13145098	427	464	47	0.9978448275862069	+	UGAUUGGUGCAUUUCGAUCCUUGCUGC	353	4	456	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13148777-13149204	Cluster_763	Pocillopora_meandrina_HIv1___Sc0000001	13148777	13149204	428	116	9	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	75	0	116	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13360013-13360440	Cluster_764	Pocillopora_meandrina_HIv1___Sc0000001	13360013	13360440	428	180	62	0.9777777777777777	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	44	1	174	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13536986-13537433	Cluster_765	Pocillopora_meandrina_HIv1___Sc0000001	13536986	13537433	448	450	216	0.02666666666666667	-	UCUUUCGUCUGUUGUCGAUAAAUGAGAGC	29	11	421	4	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13655505-13655921	Cluster_766	Pocillopora_meandrina_HIv1___Sc0000001	13655505	13655921	417	154	19	1.0	+	GAGUGCGCUCUUAACGG	52	154	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13673787-13674203	Cluster_767	Pocillopora_meandrina_HIv1___Sc0000001	13673787	13674203	417	170	23	1.0	+	GAGUGCGCUCUUAACGG	42	170	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13822443-13822984	Cluster_768	Pocillopora_meandrina_HIv1___Sc0000001	13822443	13822984	542	1261	266	0.5392545598731165	.	AAGGAUCAUAUUACUGACAUUUGUAAAU	191	10	1195	8	2	15	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:13871296-13871710	Cluster_769	Pocillopora_meandrina_HIv1___Sc0000001	13871296	13871710	415	116	22	0.0	-	UGACAACUUUUGACG	50	116	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14013922-14014421	Cluster_770	Pocillopora_meandrina_HIv1___Sc0000001	14013922	14014421	500	269	121	0.24907063197026022	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	28	4	241	2	5	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14014595-14015004	Cluster_771	Pocillopora_meandrina_HIv1___Sc0000001	14014595	14015004	410	207	152	0.2222222222222222	.	UUUUUACCUCCAUCCGGCGAUUGUAACC	6	5	179	0	1	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14015157-14015566	Cluster_772	Pocillopora_meandrina_HIv1___Sc0000001	14015157	14015566	410	366	232	0.25956284153005466	.	UGUUCUUUCUCUGCUGUAAUAUAUGGC	18	3	299	3	5	22	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14017598-14018025	Cluster_773	Pocillopora_meandrina_HIv1___Sc0000001	14017598	14018025	428	212	78	0.05660377358490566	-	UAUACACGUUUAGGAUCUUCAUUUUUGA	100	2	206	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14311649-14312063	Cluster_774	Pocillopora_meandrina_HIv1___Sc0000001	14311649	14312063	415	107	25	0.04672897196261682	-	UUGUUUAUGCCGUGA	74	90	11	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14502165-14502594	Cluster_775	Pocillopora_meandrina_HIv1___Sc0000001	14502165	14502594	430	330	60	0.021212121212121213	-	GUGCUGCAGAUCUAAGGUUCAAUUAUCUU	113	10	310	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14757192-14757869	Cluster_776	Pocillopora_meandrina_HIv1___Sc0000001	14757192	14757869	678	8063	534	0.0032246062259704824	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2168	10	7944	6	47	28	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14757947-14758432	Cluster_777	Pocillopora_meandrina_HIv1___Sc0000001	14757947	14758432	486	359	219	0.20891364902506965	.	UUACCAGUCUCUGCAUUAUUCUUGCUC	9	9	293	0	4	21	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14787117-14787543	Cluster_778	Pocillopora_meandrina_HIv1___Sc0000001	14787117	14787543	427	183	73	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	19	1	174	3	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14804465-14805185	Cluster_779	Pocillopora_meandrina_HIv1___Sc0000001	14804465	14805185	721	794	180	0.7795969773299748	.	UGAAACUCUGAUCUGAAAACAUUUGUC	138	14	748	10	7	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14844025-14844488	Cluster_780	Pocillopora_meandrina_HIv1___Sc0000001	14844025	14844488	464	3055	134	0.9944353518821604	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	1528	2	3048	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14871240-14871867	Cluster_781	Pocillopora_meandrina_HIv1___Sc0000001	14871240	14871867	628	275	141	0.3890909090909091	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	26	3	221	3	4	16	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14937302-14937732	Cluster_782	Pocillopora_meandrina_HIv1___Sc0000001	14937302	14937732	431	2022	187	0.002472799208704253	-	GCAGCAUCUGUACUACGCCUCGCACUCAGU	963	119	1798	20	57	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:14959048-14959463	Cluster_783	Pocillopora_meandrina_HIv1___Sc0000001	14959048	14959463	416	251	25	0.9800796812749004	+	GCUAAGGAGUGUGUA	87	247	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15035106-15035533	Cluster_784	Pocillopora_meandrina_HIv1___Sc0000001	15035106	15035533	428	169	65	0.023668639053254437	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	22	2	156	0	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15227525-15228110	Cluster_785	Pocillopora_meandrina_HIv1___Sc0000001	15227525	15228110	586	802	245	0.06733167082294264	-	UGGAUUCUAUGACCUGAAUUGAGCA	105	6	773	5	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15228296-15228850	Cluster_786	Pocillopora_meandrina_HIv1___Sc0000001	15228296	15228850	555	626	157	0.2779552715654952	.	CGCUAUGUGACAUCCCUGGACAAAGUUCC	141	4	557	5	2	24	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15230069-15230772	Cluster_787	Pocillopora_meandrina_HIv1___Sc0000001	15230069	15230772	704	1067	290	0.8791002811621368	+	UAUAAUGGCACUUUCCUAUCUUCUGGCC	82	8	1001	4	7	14	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15257323-15258019	Cluster_788	Pocillopora_meandrina_HIv1___Sc0000001	15257323	15258019	697	823	263	0.7837181044957473	.	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	120	23	753	3	3	13	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15302473-15302902	Cluster_789	Pocillopora_meandrina_HIv1___Sc0000001	15302473	15302902	430	192	20	0.9947916666666666	+	AAAGAAAGAAGUACCUAACUGAACUAGAUG	111	1	190	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15440801-15442329	Cluster_790	Pocillopora_meandrina_HIv1___Sc0000001	15440801	15442329	1529	3598	793	0.9647026125625348	+	UAAAAGCGAACUUUUUCAUCAGAAUCAAAA	171	56	3439	24	15	30	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15491596-15492021	Cluster_791	Pocillopora_meandrina_HIv1___Sc0000001	15491596	15492021	426	200	51	0.0	-	UUCCAUCACUGUUCUAGGUAACAUUA	83	0	199	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15572839-15573266	Cluster_792	Pocillopora_meandrina_HIv1___Sc0000001	15572839	15573266	428	131	45	1.0	+	GUGGCGAAAACUCUUGACAAGAUCCUGUCU	33	14	102	5	9	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15586985-15587400	Cluster_793	Pocillopora_meandrina_HIv1___Sc0000001	15586985	15587400	416	162	16	0.9938271604938271	+	GCUGGAUGAUGAGACA	143	155	1	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15682587-15683052	Cluster_794	Pocillopora_meandrina_HIv1___Sc0000001	15682587	15683052	466	458	157	0.8558951965065502	+	UGUGAUCUUAAAGAAUUGACGGGUUUA	52	7	436	2	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15688821-15689251	Cluster_795	Pocillopora_meandrina_HIv1___Sc0000001	15688821	15689251	431	162	66	0.7530864197530864	.	UAAGUUACAUUAACAAUUUUGAGCCUUUUGC	20	3	147	2	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15704079-15704486	Cluster_796	Pocillopora_meandrina_HIv1___Sc0000001	15704079	15704486	408	164	101	0.4451219512195122	.	ACUGGAUACAAAACUGCUCGAUGC	21	2	119	1	1	7	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15704563-15705308	Cluster_797	Pocillopora_meandrina_HIv1___Sc0000001	15704563	15705308	746	408	166	0.058823529411764705	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	46	7	389	1	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15740067-15740496	Cluster_798	Pocillopora_meandrina_HIv1___Sc0000001	15740067	15740496	430	946	114	0.003171247357293869	-	AUGAAUCGGAAAAGAAUUACUUAAUGGGU	266	15	918	2	2	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:15810876-15811543	Cluster_799	Pocillopora_meandrina_HIv1___Sc0000001	15810876	15811543	668	361	209	0.32409972299168976	.	AAAGAUCUGUAGAUUGUUGC	17	232	40	40	21	22	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16011328-16011743	Cluster_800	Pocillopora_meandrina_HIv1___Sc0000001	16011328	16011743	416	167	22	0.017964071856287425	-	GAGACUUGAAGCGGC	39	165	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16038032-16038460	Cluster_801	Pocillopora_meandrina_HIv1___Sc0000001	16038032	16038460	429	194	73	0.08247422680412371	-	AUCACACCAGAACUCCAUUUGCUAGAAGG	60	11	165	2	0	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16168785-16169202	Cluster_802	Pocillopora_meandrina_HIv1___Sc0000001	16168785	16169202	418	207	90	0.11594202898550725	-	GCUGCGAUGGCCGAGUGG	44	175	21	3	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16290834-16291250	Cluster_803	Pocillopora_meandrina_HIv1___Sc0000001	16290834	16291250	417	215	160	1.0	+	UCACUGAUGGGACAAGAUU	5	61	100	12	13	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16350397-16350800	Cluster_804	Pocillopora_meandrina_HIv1___Sc0000001	16350397	16350800	404	86	29	0.06976744186046512	-	AGCUGAAGAAACUUCUAUUGAACAUGU	38	3	77	2	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:16427830-16428246	Cluster_805	Pocillopora_meandrina_HIv1___Sc0000001	16427830	16428246	417	168	16	0.9642857142857143	+	UGGCCUGAAAAAAAAAA	78	164	1	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17078271-17078693	Cluster_806	Pocillopora_meandrina_HIv1___Sc0000001	17078271	17078693	423	1980	140	0.021212121212121213	-	AAGAACACCCAAAAUAGCUGA	670	214	3	785	517	399	62	21	N	nve-miR-9425
Pocillopora_meandrina_HIv1___Sc0000001:17106031-17106458	Cluster_807	Pocillopora_meandrina_HIv1___Sc0000001	17106031	17106458	428	140	15	1.0	+	UUACCAACGUAAUAAAAGUAGAUGACGU	95	0	139	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17545442-17545857	Cluster_808	Pocillopora_meandrina_HIv1___Sc0000001	17545442	17545857	416	113	15	1.0	+	CACGGCUGCGACACCA	42	110	1	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17567794-17568216	Cluster_809	Pocillopora_meandrina_HIv1___Sc0000001	17567794	17568216	423	196	113	0.030612244897959183	-	AGUACGCAUUGAACUCUAUAGCUGACA	33	49	84	11	17	24	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17658982-17659545	Cluster_810	Pocillopora_meandrina_HIv1___Sc0000001	17658982	17659545	564	1078	214	0.10575139146567718	-	UAUGAUCAAAUACUGGAUUUCCAUCAUGU	282	7	1035	4	2	5	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17698149-17699189	Cluster_811	Pocillopora_meandrina_HIv1___Sc0000001	17698149	17699189	1041	1392	440	0.9978448275862069	+	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	121	17	1363	1	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17746216-17746632	Cluster_812	Pocillopora_meandrina_HIv1___Sc0000001	17746216	17746632	417	171	16	1.0	+	AUGUACAAUUCUAGACC	152	162	8	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17775013-17775433	Cluster_813	Pocillopora_meandrina_HIv1___Sc0000001	17775013	17775433	421	90	17	1.0	+	UUUCAUGGAUUGAGUGCUACUC	51	6	0	14	66	3	1	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17918967-17919380	Cluster_814	Pocillopora_meandrina_HIv1___Sc0000001	17918967	17919380	414	75	9	0.05333333333333334	-	GGGUCUGUAGCUCAGUC	48	72	1	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17940877-17941425	Cluster_815	Pocillopora_meandrina_HIv1___Sc0000001	17940877	17941425	549	221	47	0.995475113122172	+	CCUGUGAAUACUUCUGGCAUUACUCAAGCC	75	1	200	4	3	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17949925-17950374	Cluster_816	Pocillopora_meandrina_HIv1___Sc0000001	17949925	17950374	450	307	105	0.9869706840390879	+	UGUAACAUCGUGUGACUUGAACGCUCUUUGC	52	4	285	4	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17956254-17956682	Cluster_817	Pocillopora_meandrina_HIv1___Sc0000001	17956254	17956682	429	151	69	0.06622516556291391	-	UAGGAAAAUUGAUCUGCUGAGCUAUUUGC	21	11	130	1	2	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:17982143-17982566	Cluster_818	Pocillopora_meandrina_HIv1___Sc0000001	17982143	17982566	424	100	41	0.99	+	UCUCAACUUACCAAAAACUCUACC	21	1	59	0	1	6	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18108927-18109341	Cluster_819	Pocillopora_meandrina_HIv1___Sc0000001	18108927	18109341	415	328	5	0.006097560975609756	-	GCGGAUGUGGCGGAA	262	328	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18120359-18120786	Cluster_820	Pocillopora_meandrina_HIv1___Sc0000001	18120359	18120786	428	109	18	0.009174311926605505	-	UACCAAGGUCUUGUAGUCUAGUACAACU	65	0	108	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18465181-18465596	Cluster_821	Pocillopora_meandrina_HIv1___Sc0000001	18465181	18465596	416	264	13	0.9962121212121212	+	CCUUACGGCGGGGCCA	193	263	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18466749-18467165	Cluster_822	Pocillopora_meandrina_HIv1___Sc0000001	18466749	18467165	417	1628	65	0.9975429975429976	+	CCUUGCGGCGGGGCA	660	1620	3	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18469013-18469429	Cluster_823	Pocillopora_meandrina_HIv1___Sc0000001	18469013	18469429	417	2019	98	0.001981178801386825	-	CCUUACGGCGGGGCC	986	1992	17	4	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18473692-18474189	Cluster_824	Pocillopora_meandrina_HIv1___Sc0000001	18473692	18474189	498	1387	99	0.0007209805335255948	-	CCUUACGGCGGGGCA	429	1348	19	4	5	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18474274-18474689	Cluster_825	Pocillopora_meandrina_HIv1___Sc0000001	18474274	18474689	416	594	52	0.003367003367003367	-	CCUUUCGGCGGGGCU	276	594	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18476707-18477122	Cluster_826	Pocillopora_meandrina_HIv1___Sc0000001	18476707	18477122	416	211	12	1.0	+	CCUUACGGCGGGGCCA	144	211	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18480082-18480873	Cluster_827	Pocillopora_meandrina_HIv1___Sc0000001	18480082	18480873	792	3896	331	0.0033367556468172485	-	CCUUUCGGCGGGGCC	1099	3684	51	52	32	52	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18490588-18491002	Cluster_828	Pocillopora_meandrina_HIv1___Sc0000001	18490588	18491002	415	264	140	0.9924242424242424	+	AGGACAGUCGCAGCA	72	136	67	25	16	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18606097-18606514	Cluster_829	Pocillopora_meandrina_HIv1___Sc0000001	18606097	18606514	418	1491	24	1.0	+	UUCCGAGGUCGCGUUC	951	1490	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18622873-18623297	Cluster_830	Pocillopora_meandrina_HIv1___Sc0000001	18622873	18623297	425	158	102	0.13924050632911392	-	GUAGUUGAUAGAACUUUACAGGCAGACGU	21	38	84	9	4	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18718209-18718626	Cluster_831	Pocillopora_meandrina_HIv1___Sc0000001	18718209	18718626	418	226	18	0.995575221238938	+	CUUUCCGAGGUCGCGCUC	79	226	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:18863976-18864391	Cluster_832	Pocillopora_meandrina_HIv1___Sc0000001	18863976	18864391	416	206	67	0.9951456310679612	+	CCCAAGGAUGAAGAA	61	165	24	5	6	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19145766-19145858	Cluster_833	Pocillopora_meandrina_HIv1___Sc0000001	19145766	19145858	93	7152	318	1.0	+	CGCUCUUAAAAUCUCCUAGCUAU	1551	1757	84	631	1292	2632	756	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000001:19235018-19235447	Cluster_834	Pocillopora_meandrina_HIv1___Sc0000001	19235018	19235447	430	340	27	0.0	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	193	0	340	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19237350-19237983	Cluster_835	Pocillopora_meandrina_HIv1___Sc0000001	19237350	19237983	634	2970	384	0.805050505050505	+	UGUUUCACACUUUACUACAUUCCCUGGU	798	67	2448	8	20	390	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19296526-19296940	Cluster_836	Pocillopora_meandrina_HIv1___Sc0000001	19296526	19296940	415	1122	10	0.9991087344028521	+	CUUUCCGAGGUCACG	1063	1122	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19318656-19319210	Cluster_837	Pocillopora_meandrina_HIv1___Sc0000001	19318656	19319210	555	440	147	0.3704545454545455	.	CGCUAUGUGACAUCCCUGGACAAAGUUCC	62	1	402	8	4	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19329321-19329746	Cluster_838	Pocillopora_meandrina_HIv1___Sc0000001	19329321	19329746	426	100	39	0.93	+	UACAAACAACAGAAUGUUCGAACGGCUCGAC	26	3	91	2	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19339952-19340366	Cluster_839	Pocillopora_meandrina_HIv1___Sc0000001	19339952	19340366	415	85	7	0.03529411764705882	-	UAUAGACUUGGAAGCGGA	34	82	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19363841-19364257	Cluster_840	Pocillopora_meandrina_HIv1___Sc0000001	19363841	19364257	417	180	16	0.9944444444444445	+	GACUGUUACAGCCCGGA	54	180	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19460429-19460910	Cluster_841	Pocillopora_meandrina_HIv1___Sc0000001	19460429	19460910	482	56323	821	0.9999644905278483	+	GGGGGACUAGCUCAGA	17943	47847	4753	1638	828	1085	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19495966-19496440	Cluster_842	Pocillopora_meandrina_HIv1___Sc0000001	19495966	19496440	475	844	295	0.26421800947867297	.	UGGACUUCGGCUCUAAAGGA	148	705	21	68	31	15	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19538058-19538488	Cluster_843	Pocillopora_meandrina_HIv1___Sc0000001	19538058	19538488	431	364	64	0.9807692307692307	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	172	8	353	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19618795-19619232	Cluster_844	Pocillopora_meandrina_HIv1___Sc0000001	19618795	19619232	438	1237	276	0.9668552950687146	+	UGUGUCUUUCUCUUAGUGCUGUAAGGU	235	8	1204	2	5	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19619539-19619966	Cluster_845	Pocillopora_meandrina_HIv1___Sc0000001	19619539	19619966	428	481	230	0.9230769230769231	+	UGAAUCUCUUACAACCAUAGCACUUGCU	39	14	441	1	4	14	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19620002-19621068	Cluster_846	Pocillopora_meandrina_HIv1___Sc0000001	19620002	19621068	1067	990	457	0.9313131313131313	+	UGAUAACUUGCUAUCGAUCGCGGUACU	77	11	938	7	7	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19621503-19622197	Cluster_847	Pocillopora_meandrina_HIv1___Sc0000001	19621503	19622197	695	989	373	0.8523761375126391	+	UGUUCCUUGAAUUCUGCGUGCACAAAGC	189	17	869	7	14	30	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19622523-19623533	Cluster_848	Pocillopora_meandrina_HIv1___Sc0000001	19622523	19623533	1011	2701	786	0.8022954461310625	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	228	32	2225	14	31	107	292	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19640322-19641983	Cluster_849	Pocillopora_meandrina_HIv1___Sc0000001	19640322	19641983	1662	2516	912	0.9383942766295708	+	UGUGUCUUUCUCUUAGUGCUGUAAGGU	252	53	2333	16	12	33	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19642083-19642590	Cluster_850	Pocillopora_meandrina_HIv1___Sc0000001	19642083	19642590	508	591	189	0.949238578680203	+	UGAUAACUUGCUAUCGAUCGCGGUACU	85	4	569	1	4	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19643033-19644113	Cluster_851	Pocillopora_meandrina_HIv1___Sc0000001	19643033	19644113	1081	2540	839	0.8929133858267716	+	UGUUCCUUGAAUUCUGCGUGCACAAAGC	205	46	2303	27	34	59	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19644177-19645055	Cluster_852	Pocillopora_meandrina_HIv1___Sc0000001	19644177	19645055	879	1823	475	0.8310477235326386	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	271	12	1555	5	20	53	178	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19794109-19794523	Cluster_853	Pocillopora_meandrina_HIv1___Sc0000001	19794109	19794523	415	76	8	0.9605263157894737	+	CGGCAUGCAAAAAAA	35	74	0	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19992950-19993378	Cluster_854	Pocillopora_meandrina_HIv1___Sc0000001	19992950	19993378	429	457	118	0.12910284463894967	-	UGGUUACUGAGGAAGAAAAGAAGU	88	15	260	29	6	14	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:19995372-19996074	Cluster_855	Pocillopora_meandrina_HIv1___Sc0000001	19995372	19996074	703	1082	275	0.300369685767098	.	UUAAGCAUUAUCGAAGGUAACCAGACUG	104	9	918	3	5	54	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20029267-20029683	Cluster_856	Pocillopora_meandrina_HIv1___Sc0000001	20029267	20029683	417	160	20	0.04375	-	CGGCCUGAAAAAAAAAA	135	152	2	4	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20109411-20109815	Cluster_857	Pocillopora_meandrina_HIv1___Sc0000001	20109411	20109815	405	219	178	0.9954337899543378	+	CCAAGGGACCUUUUUCUGAAAA	3	66	87	17	20	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20128710-20129245	Cluster_858	Pocillopora_meandrina_HIv1___Sc0000001	20128710	20129245	536	1643	394	0.0	-	AGGGAAGUGUAGCUCAAUUACAUGAGAGUU	162	446	976	59	47	56	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20129986-20130408	Cluster_859	Pocillopora_meandrina_HIv1___Sc0000001	20129986	20130408	423	536	112	0.0	-	AAAACAUGGCUGAUGAGGA	67	411	50	38	18	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20132880-20133296	Cluster_860	Pocillopora_meandrina_HIv1___Sc0000001	20132880	20133296	417	84	9	0.9404761904761905	+	CGGCCUGAAAAAAAAAA	48	81	1	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20270769-20271189	Cluster_861	Pocillopora_meandrina_HIv1___Sc0000001	20270769	20271189	421	284	121	0.6197183098591549	.	UGUGUCCAAACGUCGGCUUUG	68	129	2	130	19	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20271286-20271710	Cluster_862	Pocillopora_meandrina_HIv1___Sc0000001	20271286	20271710	425	345	178	0.7594202898550725	.	UUUGGACACAUGUGCUGCGAG	37	185	11	118	23	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20348288-20348706	Cluster_863	Pocillopora_meandrina_HIv1___Sc0000001	20348288	20348706	419	236	157	1.0	+	AGUGGCUGAUCUCAGUGAAAUU	14	57	94	24	24	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20349257-20349659	Cluster_864	Pocillopora_meandrina_HIv1___Sc0000001	20349257	20349659	403	242	180	0.987603305785124	+	UUUUCUCUGAUAAUGUUGCUGUA	5	73	96	17	22	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20350380-20350797	Cluster_865	Pocillopora_meandrina_HIv1___Sc0000001	20350380	20350797	418	320	216	0.9875	+	AAAAGUAGUUUGAUUGUUCGGC	8	108	114	24	28	26	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20351603-20352019	Cluster_866	Pocillopora_meandrina_HIv1___Sc0000001	20351603	20352019	417	289	147	0.9792387543252595	+	GCUGUGCCUUUGUAGA	51	194	36	14	25	13	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20354485-20354907	Cluster_867	Pocillopora_meandrina_HIv1___Sc0000001	20354485	20354907	423	357	215	1.0	+	GACGGUCUGUAUUUUCACUGCA	15	99	124	32	39	35	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20375868-20376284	Cluster_868	Pocillopora_meandrina_HIv1___Sc0000001	20375868	20376284	417	107	10	0.0	-	UCCCCGCAUCUCCACCC	90	107	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20455816-20456244	Cluster_869	Pocillopora_meandrina_HIv1___Sc0000001	20455816	20456244	429	258	49	0.0	-	CCCGAGUUGUCUCCUGUCCGAGGUUCAGU	116	18	234	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20482530-20482945	Cluster_870	Pocillopora_meandrina_HIv1___Sc0000001	20482530	20482945	416	874	8	0.9988558352402745	+	GGGGUACCCGAACAUG	834	872	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20499339-20499904	Cluster_871	Pocillopora_meandrina_HIv1___Sc0000001	20499339	20499904	566	1267	357	0.06393054459352802	-	UCUUCCGGUCUGUUUUCGCUUUUUCUGGA	140	34	1160	11	7	32	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20501241-20502218	Cluster_872	Pocillopora_meandrina_HIv1___Sc0000001	20501241	20502218	978	1899	507	0.012111637704054766	-	UGCUGUAGUUUUUACUUCCGACUGAACAUU	149	9	1861	2	4	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20642790-20643214	Cluster_873	Pocillopora_meandrina_HIv1___Sc0000001	20642790	20643214	425	167	60	0.8922155688622755	+	AUUGGUGAAAGAGUAAGAUUCUGGC	61	3	129	1	3	2	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20646624-20647052	Cluster_874	Pocillopora_meandrina_HIv1___Sc0000001	20646624	20647052	429	208	46	0.2403846153846154	.	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	73	0	205	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20647431-20647855	Cluster_875	Pocillopora_meandrina_HIv1___Sc0000001	20647431	20647855	425	169	27	0.17751479289940827	-	UAGUUUGAAAAGAUAUCGCUCAGUG	75	3	147	5	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20971110-20971537	Cluster_876	Pocillopora_meandrina_HIv1___Sc0000001	20971110	20971537	428	229	105	0.9650655021834061	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	52	1	225	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:20971932-20972339	Cluster_877	Pocillopora_meandrina_HIv1___Sc0000001	20971932	20972339	408	189	104	0.5978835978835979	.	ACUGGAUACAAAACUGCUCGAUGC	25	0	142	1	0	7	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21206411-21206826	Cluster_878	Pocillopora_meandrina_HIv1___Sc0000001	21206411	21206826	416	255	37	0.9882352941176471	+	GAACCGGCCGUGGAU	40	254	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21215812-21216293	Cluster_879	Pocillopora_meandrina_HIv1___Sc0000001	21215812	21216293	482	3479	588	0.0008623167576889911	-	CAGCGAUGAUGAAGACU	195	1678	647	287	157	421	289	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21278193-21278618	Cluster_880	Pocillopora_meandrina_HIv1___Sc0000001	21278193	21278618	426	443	126	0.002257336343115124	-	AUGGUCUUGUGAAUUUUUGCUGGAUA	91	66	175	95	43	18	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21278917-21279464	Cluster_881	Pocillopora_meandrina_HIv1___Sc0000001	21278917	21279464	548	678	291	0.0	-	CUCUGAAUCAGACUUUCAAACAUCA	32	113	353	24	92	54	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21443208-21443614	Cluster_882	Pocillopora_meandrina_HIv1___Sc0000001	21443208	21443614	407	215	171	0.018604651162790697	-	UAUAGUCGACUCAAG	6	66	86	17	20	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21443789-21444196	Cluster_883	Pocillopora_meandrina_HIv1___Sc0000001	21443789	21444196	408	277	212	0.01444043321299639	-	UCUUGAACGACUGAAGGACGUGUGCCAAC	5	82	118	25	23	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000001:21448381-21448799	Cluster_884	Pocillopora_meandrina_HIv1___Sc0000001	21448381	21448799	419	473	336	0.0	-	CGUGGACUGUCUACGUGAUCUGGACAAGA	8	156	182	38	49	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:43675-44102	Cluster_885	Pocillopora_meandrina_HIv1___Sc0000002	43675	44102	428	356	137	0.9157303370786517	+	UCUGUCUCCUCUGUAAUAAUGACACUGA	57	4	342	3	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:66073-66501	Cluster_886	Pocillopora_meandrina_HIv1___Sc0000002	66073	66501	429	291	21	0.010309278350515464	-	CGUGUUUGGAUUACGAUCACCUGAAGCGC	189	1	283	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:217180-217605	Cluster_887	Pocillopora_meandrina_HIv1___Sc0000002	217180	217605	426	91	28	0.9560439560439561	+	UAGGAUAUAUCACUUGCGUAAUUUACA	18	1	86	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:242838-243539	Cluster_888	Pocillopora_meandrina_HIv1___Sc0000002	242838	243539	702	266	149	0.9398496240601504	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	34	4	248	2	5	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:244771-245196	Cluster_889	Pocillopora_meandrina_HIv1___Sc0000002	244771	245196	426	193	116	0.8290155440414507	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	24	3	173	0	1	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:313284-313712	Cluster_890	Pocillopora_meandrina_HIv1___Sc0000002	313284	313712	429	2224	103	0.01079136690647482	-	UAACUUCAACUAGAUCGAAAUGCUUGUGA	1626	14	2201	4	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:340857-341277	Cluster_891	Pocillopora_meandrina_HIv1___Sc0000002	340857	341277	421	502	342	0.9940239043824701	+	GCCGAAGAAGAAGAGGACU	10	172	165	51	36	38	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:564404-564854	Cluster_892	Pocillopora_meandrina_HIv1___Sc0000002	564404	564854	451	1461	206	0.7433264887063655	.	UAGGAUAUAUCACUUGCGUAAUUUACA	270	27	1368	4	23	21	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:568135-569331	Cluster_893	Pocillopora_meandrina_HIv1___Sc0000002	568135	569331	1197	1290	537	0.11627906976744186	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	112	13	1192	5	5	26	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:569421-570207	Cluster_894	Pocillopora_meandrina_HIv1___Sc0000002	569421	570207	787	576	332	0.07118055555555555	-	UGCAAGAAGUACUGGGUUCACUGAGACC	22	5	551	0	1	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:570310-571232	Cluster_895	Pocillopora_meandrina_HIv1___Sc0000002	570310	571232	923	665	279	0.045112781954887216	-	UGGUUGUACUCUUAUACUCAAUGAUAUA	83	6	627	3	1	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:622212-623333	Cluster_896	Pocillopora_meandrina_HIv1___Sc0000002	622212	623333	1122	816	390	0.8786764705882353	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	45	12	694	2	6	17	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:626450-626878	Cluster_897	Pocillopora_meandrina_HIv1___Sc0000002	626450	626878	429	242	29	1.0	+	UCUGAUGACACUUUGGACUUGGGACUU	100	2	236	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:633884-634290	Cluster_898	Pocillopora_meandrina_HIv1___Sc0000002	633884	634290	407	202	132	0.8663366336633663	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	13	2	183	2	3	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:634394-634810	Cluster_899	Pocillopora_meandrina_HIv1___Sc0000002	634394	634810	417	264	171	0.9431818181818182	+	UCAGACACGUGGAUACUUGCGAUGAAGU	13	2	247	0	1	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:635168-635654	Cluster_900	Pocillopora_meandrina_HIv1___Sc0000002	635168	635654	487	269	117	0.9256505576208178	+	UCUACGUCUAUCAACCAGGAAUGAAACUCGU	22	3	250	3	0	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:636324-636750	Cluster_901	Pocillopora_meandrina_HIv1___Sc0000002	636324	636750	427	175	62	0.7257142857142858	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	29	2	136	0	2	4	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:645285-645712	Cluster_902	Pocillopora_meandrina_HIv1___Sc0000002	645285	645712	428	239	31	1.0	+	UGGCUCAACCAACUGAAGUGAAAUAUUC	185	0	235	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:651110-651535	Cluster_903	Pocillopora_meandrina_HIv1___Sc0000002	651110	651535	426	190	81	0.9526315789473684	+	UCUGUAGUAAACUGGCUGAUAUUUUC	32	1	179	0	4	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:663356-663783	Cluster_904	Pocillopora_meandrina_HIv1___Sc0000002	663356	663783	428	122	48	0.9918032786885246	+	UUAUUUGAGAUUUGGGAUAAUGUGUGUU	22	3	117	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:675552-675980	Cluster_905	Pocillopora_meandrina_HIv1___Sc0000002	675552	675980	429	185	59	0.14054054054054055	-	UGUUGCUUUACGGAUUUUGAGUUACCUUC	42	2	155	2	1	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:681758-682175	Cluster_906	Pocillopora_meandrina_HIv1___Sc0000002	681758	682175	418	196	111	0.29591836734693877	.	GACGAUCUUAACAAGGGCAUGGA	29	5	141	0	3	36	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:840309-840739	Cluster_907	Pocillopora_meandrina_HIv1___Sc0000002	840309	840739	431	217	120	0.12903225806451613	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	26	3	201	2	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:841966-842667	Cluster_908	Pocillopora_meandrina_HIv1___Sc0000002	841966	842667	702	235	123	0.07659574468085106	-	UGUACUUUGUCUUUGUUGAAUUUGAUUC	23	5	222	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:961248-961779	Cluster_909	Pocillopora_meandrina_HIv1___Sc0000002	961248	961779	532	396	186	1.0	+	AAGCUGAGUUUCCAAUGCCUGGCAUGG	35	102	218	15	14	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:987966-988383	Cluster_910	Pocillopora_meandrina_HIv1___Sc0000002	987966	988383	418	103	14	0.9902912621359223	+	GUGCUGGGUAACUUUGGUG	39	102	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1019618-1020044	Cluster_911	Pocillopora_meandrina_HIv1___Sc0000002	1019618	1020044	427	151	54	0.033112582781456956	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	41	1	144	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1170901-1171355	Cluster_912	Pocillopora_meandrina_HIv1___Sc0000002	1170901	1171355	455	530	96	0.5018867924528302	.	UUGGAACGUGUUGCUGAACGCUUGUUGC	155	19	498	0	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1393700-1394127	Cluster_913	Pocillopora_meandrina_HIv1___Sc0000002	1393700	1394127	428	160	86	0.65625	.	CCUGGUCUUAAAUUCAUACGUUGUGAUA	25	3	127	2	2	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1394760-1395187	Cluster_914	Pocillopora_meandrina_HIv1___Sc0000002	1394760	1395187	428	566	250	0.1855123674911661	-	UGGGUAUACUGAGAAUAGAAAUUGGCC	49	5	508	4	11	19	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1395191-1395832	Cluster_915	Pocillopora_meandrina_HIv1___Sc0000002	1395191	1395832	642	496	265	0.2903225806451613	.	UGAUUCAUCAGUAUUAAUGACUGUAGU	53	11	420	6	11	16	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1451017-1453080	Cluster_916	Pocillopora_meandrina_HIv1___Sc0000002	1451017	1453080	2064	2856	1167	0.9562324929971989	+	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	93	27	2715	9	20	42	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1457990-1458924	Cluster_917	Pocillopora_meandrina_HIv1___Sc0000002	1457990	1458924	935	1044	361	0.044061302681992334	-	UAAUGACUUCAGAGUAGACAGAGACGGU	61	6	1005	10	2	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1470195-1470624	Cluster_918	Pocillopora_meandrina_HIv1___Sc0000002	1470195	1470624	430	581	64	0.05163511187607573	-	UUAACUCCACGGUGCCAAUGACUUUCUU	139	11	549	2	2	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1576491-1576920	Cluster_919	Pocillopora_meandrina_HIv1___Sc0000002	1576491	1576920	430	314	70	0.9936305732484076	+	UAUUUGGAAAAGUGGUUCCCAAGACUGGG	60	24	283	3	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1603258-1603679	Cluster_920	Pocillopora_meandrina_HIv1___Sc0000002	1603258	1603679	422	155	72	0.9096774193548387	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	23	0	146	0	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1603755-1604298	Cluster_921	Pocillopora_meandrina_HIv1___Sc0000002	1603755	1604298	544	404	171	0.9331683168316832	+	UGAGGACAGAUCUAAUGUACUGAAAAGCGUU	58	4	392	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1604450-1604878	Cluster_922	Pocillopora_meandrina_HIv1___Sc0000002	1604450	1604878	429	202	88	0.9554455445544554	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	48	3	195	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1605183-1605789	Cluster_923	Pocillopora_meandrina_HIv1___Sc0000002	1605183	1605789	607	402	172	0.9154228855721394	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	32	2	382	1	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1730182-1730612	Cluster_924	Pocillopora_meandrina_HIv1___Sc0000002	1730182	1730612	431	356	74	0.9578651685393258	+	UAGGUAAAGUCUUUCUGUUGACAGAGUU	118	7	338	1	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1795439-1795856	Cluster_925	Pocillopora_meandrina_HIv1___Sc0000002	1795439	1795856	418	122	72	0.7786885245901639	.	AAUCCAGACAAAGAAAUCAAAGAA	6	9	73	2	4	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1795902-1796330	Cluster_926	Pocillopora_meandrina_HIv1___Sc0000002	1795902	1796330	429	181	39	0.6408839779005525	.	AUGACGAAUAUGUUUACACGGUAGGCGGU	68	1	168	4	7	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1796433-1796862	Cluster_927	Pocillopora_meandrina_HIv1___Sc0000002	1796433	1796862	430	410	102	0.9658536585365853	+	AGCGAUUAGAAGAGCUAGACAUCAUCGAGA	132	11	322	3	6	27	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1991286-1992119	Cluster_928	Pocillopora_meandrina_HIv1___Sc0000002	1991286	1992119	834	589	239	0.9524617996604414	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	57	4	566	1	2	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:1993635-1994064	Cluster_929	Pocillopora_meandrina_HIv1___Sc0000002	1993635	1994064	430	241	138	0.25311203319502074	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	12	2	223	1	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2021978-2022386	Cluster_930	Pocillopora_meandrina_HIv1___Sc0000002	2021978	2022386	409	87	25	0.9655172413793104	+	GAUUGGCUCUAAGCA	58	76	5	3	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2177166-2177595	Cluster_931	Pocillopora_meandrina_HIv1___Sc0000002	2177166	2177595	430	3279	119	1.0	+	UUCUCUCGAACAUUUUACUAUUUAGGUA	1853	15	3175	2	7	68	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2251895-2252812	Cluster_932	Pocillopora_meandrina_HIv1___Sc0000002	2251895	2252812	918	877	314	0.20752565564424175	.	UUCAACGUGUGUAGGACCUUUUUCAGCC	51	9	806	6	8	22	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2253915-2254342	Cluster_933	Pocillopora_meandrina_HIv1___Sc0000002	2253915	2254342	428	127	20	0.015748031496062992	-	UUCGACUGCUGUGUCCAUCUCGACUGAAGC	21	0	125	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2307761-2308184	Cluster_934	Pocillopora_meandrina_HIv1___Sc0000002	2307761	2308184	424	264	149	0.3712121212121212	.	UUGCAAUUGAGCUCUCCCCUGAAG	9	2	227	2	5	2	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2308601-2309648	Cluster_935	Pocillopora_meandrina_HIv1___Sc0000002	2308601	2309648	1048	859	266	0.31431897555296856	.	UGAUACAAUUCUGGCGCUGAGCAAAUGCC	57	11	725	9	2	40	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2310173-2310599	Cluster_936	Pocillopora_meandrina_HIv1___Sc0000002	2310173	2310599	427	194	75	0.5360824742268041	.	AAUGGUAUUAAGCAUCGACGUGUA	17	0	162	0	1	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2310751-2311179	Cluster_937	Pocillopora_meandrina_HIv1___Sc0000002	2310751	2311179	429	170	33	0.1	-	UUCGACUGCUGUGUCCAUCUCGACUGAAGC	25	1	165	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2471240-2471657	Cluster_938	Pocillopora_meandrina_HIv1___Sc0000002	2471240	2471657	418	367	266	0.0027247956403269754	-	UUGACAGGAUAUGUGCACUAGCUUAUACU	7	109	189	9	20	15	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2472284-2473102	Cluster_939	Pocillopora_meandrina_HIv1___Sc0000002	2472284	2473102	819	787	562	0.0025412960609911056	-	CUGAUGAAGCUGUAGCUUAUGGUGCA	14	233	320	54	44	62	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2474111-2474556	Cluster_940	Pocillopora_meandrina_HIv1___Sc0000002	2474111	2474556	446	393	156	0.007633587786259542	-	GUCUGUCAGAUCGGACCAGAAACACUGGCC	94	51	274	5	14	36	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2583310-2583724	Cluster_941	Pocillopora_meandrina_HIv1___Sc0000002	2583310	2583724	415	93	10	0.9139784946236559	+	GCGACUGCUGCCGAC	73	89	2	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2630924-2631393	Cluster_942	Pocillopora_meandrina_HIv1___Sc0000002	2630924	2631393	470	807	182	0.9219330855018587	+	UUGUUGAUUUUCUCUUGAAGAGUUUGGA	115	27	759	1	1	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2853315-2853747	Cluster_943	Pocillopora_meandrina_HIv1___Sc0000002	2853315	2853747	433	514	80	0.9883268482490273	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	132	4	507	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2853977-2854400	Cluster_944	Pocillopora_meandrina_HIv1___Sc0000002	2853977	2854400	424	123	55	0.032520325203252036	-	ACUGGUACAAACAAAGGUCGAGUGGCCAUU	12	7	82	2	3	2	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:2908355-2908769	Cluster_945	Pocillopora_meandrina_HIv1___Sc0000002	2908355	2908769	415	78	7	0.0	-	CGUGUGCUCUUAACA	34	78	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3042300-3042714	Cluster_946	Pocillopora_meandrina_HIv1___Sc0000002	3042300	3042714	415	96	11	0.9791666666666666	+	GGAUCUGGCCCGGACUGGU	43	95	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3173969-3174387	Cluster_947	Pocillopora_meandrina_HIv1___Sc0000002	3173969	3174387	419	358	250	0.9972067039106145	+	GACGGAAAGGGAUUCUUGAUCA	7	141	124	24	26	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3174981-3175406	Cluster_948	Pocillopora_meandrina_HIv1___Sc0000002	3174981	3175406	426	259	189	0.9884169884169884	+	GACCGUGCACUUCUAGAACUGCAGCU	7	85	108	10	23	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3175714-3176133	Cluster_949	Pocillopora_meandrina_HIv1___Sc0000002	3175714	3176133	420	205	144	0.9902439024390244	+	AAAGAUAAAAAGUGGAACAAGACU	10	54	88	9	17	9	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3179266-3179681	Cluster_950	Pocillopora_meandrina_HIv1___Sc0000002	3179266	3179681	416	248	193	0.9919354838709677	+	UUUGGAAAUCUGUUUGAA	5	85	85	19	16	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3245616-3246029	Cluster_951	Pocillopora_meandrina_HIv1___Sc0000002	3245616	3246029	414	94	46	0.9680851063829787	+	AUGAGAACUUUGAAGGCU	8	81	4	0	7	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3313499-3314695	Cluster_952	Pocillopora_meandrina_HIv1___Sc0000002	3313499	3314695	1197	1315	527	0.05931558935361217	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	99	13	1233	2	7	19	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3314983-3315633	Cluster_953	Pocillopora_meandrina_HIv1___Sc0000002	3314983	3315633	651	1613	477	0.06013639181649101	-	UGUGUGUAUUAAUCGUAAGGAGUUCCUU	90	6	1539	4	6	15	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3315688-3316089	Cluster_954	Pocillopora_meandrina_HIv1___Sc0000002	3315688	3316089	402	120	62	0.075	-	UUGGUCAACGAUCGGGACGCAAAAGCUACC	13	0	113	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3316170-3316596	Cluster_955	Pocillopora_meandrina_HIv1___Sc0000002	3316170	3316596	427	337	148	0.032640949554896145	-	UAGGUAAUGGCACAAACUGAGAGGCGU	31	3	321	1	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3316653-3317190	Cluster_956	Pocillopora_meandrina_HIv1___Sc0000002	3316653	3317190	538	1551	316	0.038039974210186976	-	UGAAGAAGUUGACUUGACUGGAACCACU	140	8	1499	3	9	9	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3354798-3355219	Cluster_957	Pocillopora_meandrina_HIv1___Sc0000002	3354798	3355219	422	219	157	0.2694063926940639	.	UAUUUGUCUGAUGUUCGUCCUCCCCA	9	10	188	4	1	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3374185-3374726	Cluster_958	Pocillopora_meandrina_HIv1___Sc0000002	3374185	3374726	542	1036	345	0.999034749034749	+	AGUGGAAGAGAACUUUGCAACAUUU	205	223	546	43	126	30	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3394607-3395035	Cluster_959	Pocillopora_meandrina_HIv1___Sc0000002	3394607	3395035	429	166	46	0.8795180722891566	+	AAUGGGAAAACGAGAACAGCGUGAGUGUU	62	4	145	2	0	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3452992-3453419	Cluster_960	Pocillopora_meandrina_HIv1___Sc0000002	3452992	3453419	428	88	23	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	23	0	88	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3594328-3594932	Cluster_961	Pocillopora_meandrina_HIv1___Sc0000002	3594328	3594932	605	1379	246	0.9100797679477882	+	UACUGUCUAUCCUAACUGCGCUUCGC	172	43	1276	3	13	27	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3595018-3595453	Cluster_962	Pocillopora_meandrina_HIv1___Sc0000002	3595018	3595453	436	280	54	0.7142857142857143	.	UUACAGAAAUUAAUGCGGGAAACAGUACU	148	16	253	1	2	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3633498-3633928	Cluster_963	Pocillopora_meandrina_HIv1___Sc0000002	3633498	3633928	431	149	41	1.0	+	UUCUGGCUAGCAAUUACUUCUGAAGAAGGUU	53	3	145	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3634440-3635614	Cluster_964	Pocillopora_meandrina_HIv1___Sc0000002	3634440	3635614	1175	1472	442	0.9836956521739131	+	UAUUCUAAUUCGGUGGUUUGACAUUCCAUU	111	21	1401	8	8	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3645599-3646028	Cluster_965	Pocillopora_meandrina_HIv1___Sc0000002	3645599	3646028	430	284	90	1.0	+	AUCAGUCUGAAUGAUCGUGAAAGGGGUUGG	61	2	271	1	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3650871-3651300	Cluster_966	Pocillopora_meandrina_HIv1___Sc0000002	3650871	3651300	430	4431	234	0.9981945384788987	+	AACCACUGUAGUAAUUGACUGUUACCU	1516	48	4376	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3651393-3652409	Cluster_967	Pocillopora_meandrina_HIv1___Sc0000002	3651393	3652409	1017	807	288	0.9913258983890955	+	UCUAUUCUGGAUAGCUUGCGAUUACUGUU	68	18	776	0	4	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3653308-3653801	Cluster_968	Pocillopora_meandrina_HIv1___Sc0000002	3653308	3653801	494	935	199	0.9967914438502674	+	UACAAAACCAGUAGAAAUGCAGAAAAAACA	106	50	838	12	5	18	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3653807-3656139	Cluster_969	Pocillopora_meandrina_HIv1___Sc0000002	3653807	3656139	2333	13833	2620	0.9785296031229668	+	UCUUCCUUUUAUCUCCUGUCCUUUUUAGA	572	826	12355	77	154	202	219	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3656956-3657999	Cluster_970	Pocillopora_meandrina_HIv1___Sc0000002	3656956	3657999	1044	30390	1850	0.9972688384336953	+	UUGUCUGGAUUGUACACUUUGAAGUGCA	2189	128	29928	59	77	71	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3659265-3659693	Cluster_971	Pocillopora_meandrina_HIv1___Sc0000002	3659265	3659693	429	302	123	0.9933774834437086	+	UCUUCCCAUCGUCUUCCAAAAUUUGAGGA	28	7	288	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3660444-3660896	Cluster_972	Pocillopora_meandrina_HIv1___Sc0000002	3660444	3660896	453	1477	215	1.0	+	UACUUCUUGACUGCCUUCAUACUUGUGGC	434	16	1446	2	4	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3666052-3667754	Cluster_973	Pocillopora_meandrina_HIv1___Sc0000002	3666052	3667754	1703	2073	836	0.19971056439942114	-	UCUAACGCGUUUGUCUGACAUCCCUUU	163	32	1837	17	52	33	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3668754-3670593	Cluster_974	Pocillopora_meandrina_HIv1___Sc0000002	3668754	3670593	1840	18011	2699	0.9008383765476653	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3194	313	15917	185	100	235	1261	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3674659-3675088	Cluster_975	Pocillopora_meandrina_HIv1___Sc0000002	3674659	3675088	430	169	65	0.9881656804733728	+	UGUUUUACUCCUGAAGAGCCAACUGGACGGG	24	4	162	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3675642-3676070	Cluster_976	Pocillopora_meandrina_HIv1___Sc0000002	3675642	3676070	429	192	39	1.0	+	UAAAGAAGAGAAAUGCUAAAGGAUUCAGC	79	0	192	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3676129-3676585	Cluster_977	Pocillopora_meandrina_HIv1___Sc0000002	3676129	3676585	457	11678	106	0.9997431066963521	+	UGAUCUUCUUGAAUUUGUCAUUUACAAUA	4907	10	11637	0	8	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3676790-3677257	Cluster_978	Pocillopora_meandrina_HIv1___Sc0000002	3676790	3677257	468	2172	179	1.0	+	UUCCAUUUCACCAAAUAUUGAACCUGAAGG	482	1	2168	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3678079-3678480	Cluster_979	Pocillopora_meandrina_HIv1___Sc0000002	3678079	3678480	402	153	75	0.9934640522875817	+	UGAAGUCAUCUGUUUCCAGGGAGCUGGC	36	2	150	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3678827-3679253	Cluster_980	Pocillopora_meandrina_HIv1___Sc0000002	3678827	3679253	427	254	161	0.9960629921259843	+	UGUUUGUAUCUUCUUUCUUCUUUCUUGA	9	1	246	3	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3679595-3680568	Cluster_981	Pocillopora_meandrina_HIv1___Sc0000002	3679595	3680568	974	845	345	0.9976331360946745	+	UAAUACCAAACAUGUCUGACUCUAUGCGUC	95	14	804	4	2	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3680865-3682503	Cluster_982	Pocillopora_meandrina_HIv1___Sc0000002	3680865	3682503	1639	3167	863	0.9908430691506157	+	UAUCACUUCUACAUGGACAGAACUUUUGGGA	261	36	3058	10	17	20	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3682594-3683419	Cluster_983	Pocillopora_meandrina_HIv1___Sc0000002	3682594	3683419	826	341	163	1.0	+	UGAUCUGUCUUACUUCUAUCAACGUUGAUA	24	3	327	1	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3684709-3685113	Cluster_984	Pocillopora_meandrina_HIv1___Sc0000002	3684709	3685113	405	221	119	0.995475113122172	+	UUGGUCACUGUCUUUGCGCUAAGUUCACAUU	11	5	206	1	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3688785-3689581	Cluster_985	Pocillopora_meandrina_HIv1___Sc0000002	3688785	3689581	797	729	304	0.9876543209876543	+	UAAGUGCCAAAGACUGUUUCAGAACUUC	33	15	685	4	8	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3690290-3691344	Cluster_986	Pocillopora_meandrina_HIv1___Sc0000002	3690290	3691344	1055	508	184	0.9921259842519685	+	UUGGAUGUACCAAAUUUCUUGAGACUGGCA	64	11	490	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3694540-3695954	Cluster_987	Pocillopora_meandrina_HIv1___Sc0000002	3694540	3695954	1415	8411	1207	0.9988110807276186	+	UGUUGAUACCUGAGA	936	1124	7095	16	42	82	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3700620-3701262	Cluster_988	Pocillopora_meandrina_HIv1___Sc0000002	3700620	3701262	643	458	180	0.9847161572052402	+	UGGGAUCAAAGUACUUUAAUACAGGAGAUU	39	16	434	2	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3703878-3704313	Cluster_989	Pocillopora_meandrina_HIv1___Sc0000002	3703878	3704313	436	358	95	1.0	+	UUGACUGCCUCUGUACCUGUGAGAAAUAAC	118	1	348	7	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3705343-3706092	Cluster_990	Pocillopora_meandrina_HIv1___Sc0000002	3705343	3706092	750	809	262	0.9789864029666254	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	81	1	789	4	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3706386-3707052	Cluster_991	Pocillopora_meandrina_HIv1___Sc0000002	3706386	3707052	667	600	299	0.8733333333333333	+	UGUGAGAAAAGGAUUGAUCUGUUUUGC	27	11	532	3	2	10	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3707073-3707908	Cluster_992	Pocillopora_meandrina_HIv1___Sc0000002	3707073	3707908	836	4657	794	0.9742323384152888	+	UGUUACUUUCAGUGGCUGUUCGAGGGGC	1149	28	4392	14	70	60	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3707943-3710876	Cluster_993	Pocillopora_meandrina_HIv1___Sc0000002	3707943	3710876	2934	10937	2360	0.980159092987108	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1212	100	10531	28	32	58	188	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3712606-3713228	Cluster_994	Pocillopora_meandrina_HIv1___Sc0000002	3712606	3713228	623	389	125	0.9768637532133676	+	UUCUAUGGUAUGCAUGUCAGCAUGACUGU	45	10	365	3	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3715928-3716824	Cluster_995	Pocillopora_meandrina_HIv1___Sc0000002	3715928	3716824	897	9635	950	0.9571354436948625	+	UAUUGAACUUGGAGCAAACCUUGCCUAAA	1239	140	9052	46	117	96	184	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3718063-3719284	Cluster_996	Pocillopora_meandrina_HIv1___Sc0000002	3718063	3719284	1222	2059	495	0.8139873725109277	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	517	15	1954	5	9	23	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3719621-3720050	Cluster_997	Pocillopora_meandrina_HIv1___Sc0000002	3719621	3720050	430	106	28	1.0	+	UGUGAGGAUAGCAGCUUUUGAAAAAACAUU	65	0	103	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3725150-3726723	Cluster_998	Pocillopora_meandrina_HIv1___Sc0000002	3725150	3726723	1574	10507	1315	0.02883791757875702	-	UGUGCUUAAAAAUCUCUGGCCCAAAUACCUU	1501	53	10078	24	51	86	215	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3730451-3730897	Cluster_999	Pocillopora_meandrina_HIv1___Sc0000002	3730451	3730897	447	500	150	0.564	.	UGUGAACACGAUGAAACACCUUGCCAAA	55	5	394	4	6	56	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3730961-3731833	Cluster_1000	Pocillopora_meandrina_HIv1___Sc0000002	3730961	3731833	873	8092	988	0.805239742956006	+	UACUUGUCGAAGUCCUGGCCCUCUAGCC	2066	79	7178	24	137	316	358	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3742641-3743070	Cluster_1001	Pocillopora_meandrina_HIv1___Sc0000002	3742641	3743070	430	141	47	1.0	+	UGCGAUCGCCGCAAAGAACUUCCUUUACGA	60	1	136	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3745169-3745979	Cluster_1002	Pocillopora_meandrina_HIv1___Sc0000002	3745169	3745979	811	5842	474	0.9899007189318726	+	UGGGUUCUCGAUCACGUCUAAAUACACG	1187	46	5663	8	17	70	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3750061-3750938	Cluster_1003	Pocillopora_meandrina_HIv1___Sc0000002	3750061	3750938	878	1217	280	0.9876746096959738	+	UUAUUUGCACUAUUGUGGAAAAUUCCUGC	236	18	1188	5	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3751156-3751595	Cluster_1004	Pocillopora_meandrina_HIv1___Sc0000002	3751156	3751595	440	349	153	0.7765042979942693	.	UCACGGUAGUAGUGUUGUUCAAUAGAUU	21	4	295	2	4	27	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3765212-3765633	Cluster_1005	Pocillopora_meandrina_HIv1___Sc0000002	3765212	3765633	422	132	67	0.946969696969697	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	20	0	124	1	2	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3766728-3767132	Cluster_1006	Pocillopora_meandrina_HIv1___Sc0000002	3766728	3767132	405	116	70	0.8620689655172413	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	14	2	102	3	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3767638-3768041	Cluster_1007	Pocillopora_meandrina_HIv1___Sc0000002	3767638	3768041	404	157	96	0.8089171974522293	+	UAAAUCUCUCGGGUCAAUACAGAUGCGUA	8	3	140	0	7	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3810076-3810492	Cluster_1008	Pocillopora_meandrina_HIv1___Sc0000002	3810076	3810492	417	219	34	0.0045662100456621	-	GGAUGUCUGACUGGC	61	219	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3841944-3842042	Cluster_1009	Pocillopora_meandrina_HIv1___Sc0000002	3841944	3842042	99	108032	317	9.256516587677726e-06	-	UUGUGUAACUCCCUAAGGAAGG	58934	8088	2	2881	96451	592	18	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:3888855-3889274	Cluster_1010	Pocillopora_meandrina_HIv1___Sc0000002	3888855	3889274	420	81	31	0.9876543209876543	+	CAGUGGGCUGUAGACUCAAACUUGGGG	15	9	60	3	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3903134-3903757	Cluster_1011	Pocillopora_meandrina_HIv1___Sc0000002	3903134	3903757	624	324	113	0.033950617283950615	-	AAGUUUGAAAGGGUUAAGGAACAAGAGC	40	11	268	13	4	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3941035-3941465	Cluster_1012	Pocillopora_meandrina_HIv1___Sc0000002	3941035	3941465	431	623	107	0.052969502407704656	-	UUAACCGUUAUAGUUUUGACUUGAAUAU	100	2	551	0	36	1	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:3941649-3942338	Cluster_1013	Pocillopora_meandrina_HIv1___Sc0000002	3941649	3942338	690	2573	221	0.013991449669646328	-	CUGUGAACGAUGCCCU	594	1101	1359	5	22	68	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4018836-4019276	Cluster_1014	Pocillopora_meandrina_HIv1___Sc0000002	4018836	4019276	441	9529	996	0.9962220589778571	+	GCACAUAUACUAAAAUUGGAACGAUA	475	1859	4199	780	684	1269	738	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4047421-4047934	Cluster_1015	Pocillopora_meandrina_HIv1___Sc0000002	4047421	4047934	514	2593	361	0.7971461627458543	.	AGAGAUCUUAGAAAACGAUCGUGUGUGCG	515	47	2484	4	5	31	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4048071-4048664	Cluster_1016	Pocillopora_meandrina_HIv1___Sc0000002	4048071	4048664	594	991	252	0.056508577194752774	-	UGUUGAAAGGGAGACAUUAAAGCGAUA	75	7	949	2	12	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4048723-4049272	Cluster_1017	Pocillopora_meandrina_HIv1___Sc0000002	4048723	4049272	550	648	196	0.31790123456790126	.	ACGAUUUAGAUGCCAAGAUUGAGAACCUCU	67	4	598	3	7	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4049287-4049710	Cluster_1018	Pocillopora_meandrina_HIv1___Sc0000002	4049287	4049710	424	128	60	0.1640625	-	UUUUGUGUUAUCUUGUCUUGGAGA	19	3	92	2	1	6	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4232214-4232630	Cluster_1019	Pocillopora_meandrina_HIv1___Sc0000002	4232214	4232630	417	157	6	0.0	-	CUUGCGAGCUGUUGCCA	83	157	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4472766-4473180	Cluster_1020	Pocillopora_meandrina_HIv1___Sc0000002	4472766	4473180	415	79	12	0.0	-	GACUUGAAGCGGUUGA	34	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4540567-4540975	Cluster_1021	Pocillopora_meandrina_HIv1___Sc0000002	4540567	4540975	409	140	96	0.7071428571428572	.	AGCUUCGUUAUGAGAUGAGAAUGA	11	16	76	10	8	6	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4567952-4568379	Cluster_1022	Pocillopora_meandrina_HIv1___Sc0000002	4567952	4568379	428	161	59	0.037267080745341616	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	39	1	156	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4727879-4728314	Cluster_1023	Pocillopora_meandrina_HIv1___Sc0000002	4727879	4728314	436	201	86	0.24378109452736318	.	UGUGAUUUCAACUGUGAGUGUCAGAA	20	3	173	2	2	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4728531-4728984	Cluster_1024	Pocillopora_meandrina_HIv1___Sc0000002	4728531	4728984	454	304	104	0.049342105263157895	-	UGUUCUGUUAAUUGUUUGUCUGAGAUGC	44	4	275	2	4	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4807584-4808005	Cluster_1025	Pocillopora_meandrina_HIv1___Sc0000002	4807584	4808005	422	118	42	0.01694915254237288	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	17	2	115	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4843678-4844094	Cluster_1026	Pocillopora_meandrina_HIv1___Sc0000002	4843678	4844094	417	155	30	0.9548387096774194	+	GACUUGAAGUGGUUGGA	28	151	3	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4856630-4857723	Cluster_1027	Pocillopora_meandrina_HIv1___Sc0000002	4856630	4857723	1094	1256	496	0.982484076433121	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	87	11	1202	5	5	14	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4857758-4858160	Cluster_1028	Pocillopora_meandrina_HIv1___Sc0000002	4857758	4858160	403	157	92	0.9171974522292994	+	UGGGAAUCCGAAUCGUGGUACAAAGUCA	15	5	142	1	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4859814-4860852	Cluster_1029	Pocillopora_meandrina_HIv1___Sc0000002	4859814	4860852	1039	842	360	0.9714964370546318	+	UAACAUCUCUCUUUCCGACUUUAACAGC	55	6	802	3	6	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4860993-4862586	Cluster_1030	Pocillopora_meandrina_HIv1___Sc0000002	4860993	4862586	1594	3047	1223	0.8949786675418444	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	95	42	2787	26	25	48	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:4992098-4992528	Cluster_1031	Pocillopora_meandrina_HIv1___Sc0000002	4992098	4992528	431	1808	125	0.0022123893805309734	-	UUGGAAUUCGAAGCAAGUAACAAUUGACAGG	404	1	1796	6	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5173097-5173512	Cluster_1032	Pocillopora_meandrina_HIv1___Sc0000002	5173097	5173512	416	220	17	0.9636363636363636	+	ACGGCUGCGACACCA	105	219	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5433888-5434317	Cluster_1033	Pocillopora_meandrina_HIv1___Sc0000002	5433888	5434317	430	336	51	0.002976190476190476	-	UUCCAUGACUCUGUUUAAACGAAAACGAAC	200	2	330	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5496911-5497540	Cluster_1034	Pocillopora_meandrina_HIv1___Sc0000002	5496911	5497540	630	292	130	0.6301369863013698	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	45	4	237	4	10	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5604505-5604918	Cluster_1035	Pocillopora_meandrina_HIv1___Sc0000002	5604505	5604918	414	279	212	0.014336917562724014	-	CUUGUAACAAAGAUCGUGGGCA	8	117	84	18	27	19	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5605961-5606377	Cluster_1036	Pocillopora_meandrina_HIv1___Sc0000002	5605961	5606377	417	192	141	0.005208333333333333	-	AGAAAUUGUGUGCUUCGACA	5	71	57	20	17	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5647892-5648347	Cluster_1037	Pocillopora_meandrina_HIv1___Sc0000002	5647892	5648347	456	350	70	0.9971428571428571	+	UUCUGUUGUUUUUGUUCCCU	35	172	1	40	87	47	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5674036-5674458	Cluster_1038	Pocillopora_meandrina_HIv1___Sc0000002	5674036	5674458	423	148	67	0.02027027027027027	-	UCACUUUCCUGGCUGUCCAUGUUGAC	15	3	142	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5730888-5731313	Cluster_1039	Pocillopora_meandrina_HIv1___Sc0000002	5730888	5731313	426	191	91	0.9842931937172775	+	UGAUCCGGAGCGCUCCCGAACGCCUC	28	2	184	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5864725-5865274	Cluster_1040	Pocillopora_meandrina_HIv1___Sc0000002	5864725	5865274	550	681	226	0.591776798825257	.	GGGAAUUAGAGCCUGUGGAACAGU	110	12	407	15	12	74	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5865631-5866439	Cluster_1041	Pocillopora_meandrina_HIv1___Sc0000002	5865631	5866439	809	1604	484	0.003740648379052369	-	UCGGCUAUUCACUCUAUGAGCGAUAUCAAU	170	5	1546	8	7	4	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:5883572-5884385	Cluster_1042	Pocillopora_meandrina_HIv1___Sc0000002	5883572	5884385	814	377	209	0.870026525198939	+	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	20	1	342	3	0	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6062911-6063344	Cluster_1043	Pocillopora_meandrina_HIv1___Sc0000002	6062911	6063344	434	532	240	0.9849624060150376	+	UCGAGAUCCUGAGCU	33	50	472	2	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6066733-6067219	Cluster_1044	Pocillopora_meandrina_HIv1___Sc0000002	6066733	6067219	487	213	58	0.1784037558685446	-	CCUUUCCGAGGUCGU	96	98	72	2	3	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6069257-6069690	Cluster_1045	Pocillopora_meandrina_HIv1___Sc0000002	6069257	6069690	434	314	104	0.9777070063694268	+	UGAUGAGAGGUAAUCUGGAGCCUGACC	64	1	305	4	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6072542-6073528	Cluster_1046	Pocillopora_meandrina_HIv1___Sc0000002	6072542	6073528	987	606	279	0.5478547854785478	.	UGUAGUAUUUCCGAGCCUUUUCGCACUU	32	5	512	3	12	40	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6079695-6081472	Cluster_1047	Pocillopora_meandrina_HIv1___Sc0000002	6079695	6081472	1778	6061	1662	0.8942418742781719	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	381	52	5656	48	40	64	201	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6081680-6084216	Cluster_1048	Pocillopora_meandrina_HIv1___Sc0000002	6081680	6084216	2537	3571	1366	0.8711845421450574	+	UACUCGAAAUCUCCAAUGACUGCAUUUGA	253	43	3312	22	30	57	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6090515-6090946	Cluster_1049	Pocillopora_meandrina_HIv1___Sc0000002	6090515	6090946	432	578	86	1.0	+	UAAGACAAUAAUUGGUACUGCAACGAGUGU	73	0	578	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6094144-6095261	Cluster_1050	Pocillopora_meandrina_HIv1___Sc0000002	6094144	6095261	1118	5144	937	0.8594479004665629	+	UGAGAUUGUUAUUCCAUCCUCCUGGA	533	31	4592	14	15	373	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6100015-6101266	Cluster_1051	Pocillopora_meandrina_HIv1___Sc0000002	6100015	6101266	1252	1696	550	0.9198113207547169	+	UGACAUUACUCGUGGGUACCAAAACUGUGU	65	18	1572	5	8	43	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6102732-6103990	Cluster_1052	Pocillopora_meandrina_HIv1___Sc0000002	6102732	6103990	1259	5219	1179	0.7775435907261927	.	UUUCAAAUGCUUUUGUAGAUCAUCUCCAAA	455	107	4666	34	61	147	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6511195-6511674	Cluster_1053	Pocillopora_meandrina_HIv1___Sc0000002	6511195	6511674	480	816	281	0.020833333333333332	-	GCGCGGAUGAGCCUCACUGGUGUGGGGU	72	336	397	41	21	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6728488-6728905	Cluster_1054	Pocillopora_meandrina_HIv1___Sc0000002	6728488	6728905	418	329	19	0.0	-	CUUUCCGAGGUCGUG	111	329	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6783071-6783501	Cluster_1055	Pocillopora_meandrina_HIv1___Sc0000002	6783071	6783501	431	345	50	0.991304347826087	+	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	119	0	340	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6892811-6894007	Cluster_1056	Pocillopora_meandrina_HIv1___Sc0000002	6892811	6894007	1197	11070	1356	0.8818428184281842	+	UACUUUCUGAUUGACUUGGAGUGUGGGG	1859	109	10065	38	53	209	596	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:6894228-6894656	Cluster_1057	Pocillopora_meandrina_HIv1___Sc0000002	6894228	6894656	429	150	24	0.98	+	UUGACUGACAGAAGAUCUGGAAACUGAAGA	46	1	145	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7339211-7339638	Cluster_1058	Pocillopora_meandrina_HIv1___Sc0000002	7339211	7339638	428	86	22	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	23	1	84	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7342295-7342717	Cluster_1059	Pocillopora_meandrina_HIv1___Sc0000002	7342295	7342717	423	233	142	0.8626609442060086	+	UACUGAUAGUGAAACUGCUCCUUGAACC	16	2	219	1	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7342738-7343168	Cluster_1060	Pocillopora_meandrina_HIv1___Sc0000002	7342738	7343168	431	325	159	0.9507692307692308	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	18	5	307	1	3	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7372934-7373361	Cluster_1061	Pocillopora_meandrina_HIv1___Sc0000002	7372934	7373361	428	152	45	0.9605263157894737	+	UAAGUUGAUCUCCUACAGUUUGACAUGU	38	4	147	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7390574-7390990	Cluster_1062	Pocillopora_meandrina_HIv1___Sc0000002	7390574	7390990	417	454	31	0.0	-	GAGACUUGAAGCGGUG	202	452	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7745983-7746398	Cluster_1063	Pocillopora_meandrina_HIv1___Sc0000002	7745983	7746398	416	193	122	0.010362694300518135	-	CAUUGCUCGAGUUUUGACUGUUAUCA	19	49	99	10	17	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:7970887-7971407	Cluster_1064	Pocillopora_meandrina_HIv1___Sc0000002	7970887	7971407	521	198	83	1.0	+	UAUUUUUAAUCUCUUCUAUACCCUCUUGGA	18	0	198	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8140574-8140989	Cluster_1065	Pocillopora_meandrina_HIv1___Sc0000002	8140574	8140989	416	76	30	1.0	+	AUGAUGUCGAGCGUUUUCGGAAUGGGCA	16	1	61	4	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8468347-8468765	Cluster_1066	Pocillopora_meandrina_HIv1___Sc0000002	8468347	8468765	419	142	10	0.0	-	AUGUAAGGAGAAGAUUUUU	120	141	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8530203-8530636	Cluster_1067	Pocillopora_meandrina_HIv1___Sc0000002	8530203	8530636	434	901	97	0.9833518312985572	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	336	3	890	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8530938-8531364	Cluster_1068	Pocillopora_meandrina_HIv1___Sc0000002	8530938	8531364	427	338	88	0.0029585798816568047	-	AAUGGGAAAACGAGAACAGCGUG	39	3	165	8	7	70	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8797245-8797663	Cluster_1069	Pocillopora_meandrina_HIv1___Sc0000002	8797245	8797663	419	3161	123	1.0	+	UCACGUCGGGGUCACCA	848	3160	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8842566-8843458	Cluster_1070	Pocillopora_meandrina_HIv1___Sc0000002	8842566	8843458	893	469	203	0.3326226012793177	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	45	7	379	2	2	15	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8843642-8844337	Cluster_1071	Pocillopora_meandrina_HIv1___Sc0000002	8843642	8844337	696	833	91	0.01920768307322929	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGU	251	11	808	3	2	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:8981901-8982314	Cluster_1072	Pocillopora_meandrina_HIv1___Sc0000002	8981901	8982314	414	79	7	0.9873417721518988	+	CGUGGAAGGUAGGUA	43	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9033889-9034316	Cluster_1073	Pocillopora_meandrina_HIv1___Sc0000002	9033889	9034316	428	246	159	0.983739837398374	+	UGAAAUGCGAGAUGUAGUUGAUGAAGUCAAG	10	37	189	5	8	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9043627-9044105	Cluster_1074	Pocillopora_meandrina_HIv1___Sc0000002	9043627	9044105	479	9591	400	0.01689083515796059	-	GGAAAAUCCAGGACCUACAAUAUUUGAUGU	2958	35	9222	25	24	62	223	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9051075-9051502	Cluster_1075	Pocillopora_meandrina_HIv1___Sc0000002	9051075	9051502	428	191	75	0.015706806282722512	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	35	7	178	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9080238-9080665	Cluster_1076	Pocillopora_meandrina_HIv1___Sc0000002	9080238	9080665	428	597	62	0.006700167504187605	-	UGAAACUCUGAUCUGAAAAUAUUUGUC	215	0	594	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9153293-9153709	Cluster_1077	Pocillopora_meandrina_HIv1___Sc0000002	9153293	9153709	417	267	21	0.04868913857677903	-	UUCCACACUCAGGAUGU	239	253	9	1	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9253012-9253427	Cluster_1078	Pocillopora_meandrina_HIv1___Sc0000002	9253012	9253427	416	481	10	0.9958419958419958	+	GCUGGAUGAUGAGACG	452	481	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9690193-9690604	Cluster_1079	Pocillopora_meandrina_HIv1___Sc0000002	9690193	9690604	412	207	114	0.6570048309178744	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	26	105	51	28	11	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9784858-9785294	Cluster_1080	Pocillopora_meandrina_HIv1___Sc0000002	9784858	9785294	437	1279	159	0.9616888193901486	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	421	20	1224	5	4	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9791938-9792368	Cluster_1081	Pocillopora_meandrina_HIv1___Sc0000002	9791938	9792368	431	1357	106	0.0	-	CGAUCUAACAAGAACAAUAUGUGCUGACU	515	0	1346	2	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9806413-9806890	Cluster_1082	Pocillopora_meandrina_HIv1___Sc0000002	9806413	9806890	478	1023	166	0.093841642228739	-	UCAGGAUGCUUAAGGAAAACAGGUGGA	250	35	941	11	3	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9890408-9890815	Cluster_1083	Pocillopora_meandrina_HIv1___Sc0000002	9890408	9890815	408	187	88	0.9358288770053476	+	UACGUUUUAGUUCGAAUUGUUGGGACCU	17	6	172	1	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:9983103-9983517	Cluster_1084	Pocillopora_meandrina_HIv1___Sc0000002	9983103	9983517	415	338	56	0.9615384615384616	+	CUUUCCGAGGUCGCA	198	316	8	5	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10079214-10079641	Cluster_1085	Pocillopora_meandrina_HIv1___Sc0000002	10079214	10079641	428	347	47	0.025936599423631124	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	197	2	343	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10097278-10097878	Cluster_1086	Pocillopora_meandrina_HIv1___Sc0000002	10097278	10097878	601	659	229	0.56752655538695	.	UGCGAUUACAGAGGUGCGUUGGAACUCA	138	39	574	10	8	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10098007-10098437	Cluster_1087	Pocillopora_meandrina_HIv1___Sc0000002	10098007	10098437	431	555	162	0.9693693693693693	+	AAUGGGAAAACGAGAACAGCGUG	69	10	297	15	5	107	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10178005-10178419	Cluster_1088	Pocillopora_meandrina_HIv1___Sc0000002	10178005	10178419	415	200	22	0.0	-	GUGGAAGGUAGGUCA	174	189	3	2	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10237076-10237574	Cluster_1089	Pocillopora_meandrina_HIv1___Sc0000002	10237076	10237574	499	444	62	0.013513513513513514	-	AAGAUGUCGAGCGUUUUCGGAACGAGUCG	137	5	431	3	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10291453-10291881	Cluster_1090	Pocillopora_meandrina_HIv1___Sc0000002	10291453	10291881	429	317	58	0.9842271293375394	+	UAGGACAACUGAGAAUCCACGUAGACUC	116	0	308	0	7	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10299732-10300146	Cluster_1091	Pocillopora_meandrina_HIv1___Sc0000002	10299732	10300146	415	78	3	0.0	-	GAUGAGGCUCAUAAC	76	77	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10363177-10363591	Cluster_1092	Pocillopora_meandrina_HIv1___Sc0000002	10363177	10363591	415	101	16	0.0	-	GAUGAGGCUCAUAAC	77	91	7	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10374599-10375013	Cluster_1093	Pocillopora_meandrina_HIv1___Sc0000002	10374599	10375013	415	248	19	0.0	-	GUGGAAGGUAGGUCA	206	240	5	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10423174-10423595	Cluster_1094	Pocillopora_meandrina_HIv1___Sc0000002	10423174	10423595	422	149	32	0.013422818791946308	-	GUGUGUGUGUGUCUCUCUGUCU	39	41	17	6	61	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10556606-10557024	Cluster_1095	Pocillopora_meandrina_HIv1___Sc0000002	10556606	10557024	419	166	16	0.0	-	GUGAGGGAACUGGCUCUUG	82	165	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10616330-10616744	Cluster_1096	Pocillopora_meandrina_HIv1___Sc0000002	10616330	10616744	415	92	10	0.8913043478260869	+	CGAGCUGUUCUUCCA	80	82	4	1	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10646046-10646461	Cluster_1097	Pocillopora_meandrina_HIv1___Sc0000002	10646046	10646461	416	139	50	0.3669064748201439	.	GAAGUUCUGGUUUAAA	75	103	20	1	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10652369-10652797	Cluster_1098	Pocillopora_meandrina_HIv1___Sc0000002	10652369	10652797	429	95	26	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	39	0	93	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10654659-10655068	Cluster_1099	Pocillopora_meandrina_HIv1___Sc0000002	10654659	10655068	410	85	45	0.23529411764705882	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	17	1	80	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10656468-10656897	Cluster_1100	Pocillopora_meandrina_HIv1___Sc0000002	10656468	10656897	430	295	38	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	132	0	295	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10657860-10658289	Cluster_1101	Pocillopora_meandrina_HIv1___Sc0000002	10657860	10658289	430	1769	164	0.9892594686263426	+	AUGGGUCUUAUUGAGCAUUACAAAACAGCA	755	22	1672	17	6	9	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10689132-10689550	Cluster_1102	Pocillopora_meandrina_HIv1___Sc0000002	10689132	10689550	419	139	97	0.9928057553956835	+	AACGUGAUUUGAGCAGA	10	64	30	10	17	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10689731-10690137	Cluster_1103	Pocillopora_meandrina_HIv1___Sc0000002	10689731	10690137	407	186	125	0.9946236559139785	+	CAUGUGACCAGUCUUGUAGAGAACA	5	72	61	10	13	21	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10725804-10726232	Cluster_1104	Pocillopora_meandrina_HIv1___Sc0000002	10725804	10726232	429	146	55	0.9726027397260274	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	21	0	142	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10726293-10726712	Cluster_1105	Pocillopora_meandrina_HIv1___Sc0000002	10726293	10726712	420	191	113	0.837696335078534	+	UGUAGAGAAUCAACCGCUGAGAUAUCUGC	8	20	150	5	4	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10791061-10791610	Cluster_1106	Pocillopora_meandrina_HIv1___Sc0000002	10791061	10791610	550	211	80	0.9146919431279621	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	33	4	182	2	4	14	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10792850-10794071	Cluster_1107	Pocillopora_meandrina_HIv1___Sc0000002	10792850	10794071	1222	1939	478	0.8251676121712223	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	491	17	1826	3	13	17	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10810071-10810499	Cluster_1108	Pocillopora_meandrina_HIv1___Sc0000002	10810071	10810499	429	453	69	0.026490066225165563	-	UAAUCGACGAAUACAAUCCAGGUAUAACU	319	13	428	2	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10811366-10811817	Cluster_1109	Pocillopora_meandrina_HIv1___Sc0000002	10811366	10811817	452	1976	223	0.0015182186234817814	-	UGUGCAGUUGAAACAUAGACGCUUCUCGAGA	1105	8	1941	5	0	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10812246-10812676	Cluster_1110	Pocillopora_meandrina_HIv1___Sc0000002	10812246	10812676	431	184	63	0.021739130434782608	-	UCCGUACAAGAGUGUUUAAUCUGCGCAAACU	81	5	178	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10824578-10825173	Cluster_1111	Pocillopora_meandrina_HIv1___Sc0000002	10824578	10825173	596	3592	526	0.9752227171492205	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	622	44	3382	27	20	48	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10845722-10845816	Cluster_1112	Pocillopora_meandrina_HIv1___Sc0000002	10845722	10845816	95	11800	362	0.008898305084745763	-	UUGCCGUUAACCCAAAACCUUCA	4734	311	129	435	4992	5750	183	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:10993606-10994307	Cluster_1113	Pocillopora_meandrina_HIv1___Sc0000002	10993606	10994307	702	262	121	0.9274809160305344	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	31	2	252	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10994312-10994752	Cluster_1114	Pocillopora_meandrina_HIv1___Sc0000002	10994312	10994752	441	367	165	0.896457765667575	+	UGUUUCAGAGAGGACGAUGCUAUUAACC	30	2	337	2	4	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:10995537-10995965	Cluster_1115	Pocillopora_meandrina_HIv1___Sc0000002	10995537	10995965	429	265	145	0.8301886792452831	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	27	4	241	0	1	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11007194-11008706	Cluster_1116	Pocillopora_meandrina_HIv1___Sc0000002	11007194	11008706	1513	1932	775	0.8690476190476191	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	76	29	1783	11	16	40	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11009550-11010451	Cluster_1117	Pocillopora_meandrina_HIv1___Sc0000002	11009550	11010451	902	992	325	0.905241935483871	+	UGAGACUUGUUGUUGGGUAACUGACGUG	122	6	934	8	2	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11010488-11012492	Cluster_1118	Pocillopora_meandrina_HIv1___Sc0000002	11010488	11012492	2005	6516	1723	0.7859116022099447	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	473	265	5766	33	38	188	226	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11083015-11083429	Cluster_1119	Pocillopora_meandrina_HIv1___Sc0000002	11083015	11083429	415	183	15	1.0	+	CGGCCUGCCUCGACA	113	173	2	0	3	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11260574-11260989	Cluster_1120	Pocillopora_meandrina_HIv1___Sc0000002	11260574	11260989	416	245	23	0.0	-	AGGGACAGGUGGGCUU	86	245	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11350672-11351104	Cluster_1121	Pocillopora_meandrina_HIv1___Sc0000002	11350672	11351104	433	1066	249	0.99812382739212	+	GAAGAUUGUGGGUUC	171	854	98	75	20	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11590392-11590812	Cluster_1122	Pocillopora_meandrina_HIv1___Sc0000002	11590392	11590812	421	204	121	0.45588235294117646	.	UCCGACUGUGAGUCCAAUGC	13	118	23	41	12	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11685056-11685474	Cluster_1123	Pocillopora_meandrina_HIv1___Sc0000002	11685056	11685474	419	634	24	0.9779179810725552	+	CGGCCUGAAAAAAAAAA	292	627	5	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11846949-11847603	Cluster_1124	Pocillopora_meandrina_HIv1___Sc0000002	11846949	11847603	655	769	286	0.12743823146944083	-	UGUAGAAUCAAUCUGUUACUAAGACACC	94	9	697	10	7	22	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:11943384-11943811	Cluster_1125	Pocillopora_meandrina_HIv1___Sc0000002	11943384	11943811	428	129	41	0.12403100775193798	-	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	25	0	126	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12343138-12343591	Cluster_1126	Pocillopora_meandrina_HIv1___Sc0000002	12343138	12343591	454	550	82	0.0036363636363636364	-	UACGAUGUUGUCUUGUCUGCAAGC	105	26	8	102	119	115	180	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12358290-12358718	Cluster_1127	Pocillopora_meandrina_HIv1___Sc0000002	12358290	12358718	429	360	86	0.1527777777777778	-	UAGUGUUUGAAUUUUUGAAAGAAAUGGUC	216	36	302	14	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12381688-12382117	Cluster_1128	Pocillopora_meandrina_HIv1___Sc0000002	12381688	12382117	430	161	39	0.0	-	GUAAGAAACCACUUAGAACCAUGGAUGACA	74	4	147	0	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12509771-12510186	Cluster_1129	Pocillopora_meandrina_HIv1___Sc0000002	12509771	12510186	416	159	6	1.0	+	GCGGGUAUAGCUCAGU	140	158	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12664260-12664675	Cluster_1130	Pocillopora_meandrina_HIv1___Sc0000002	12664260	12664675	416	108	20	0.0	-	GAGUGUCCUGGGCUGCU	34	102	0	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12847776-12848204	Cluster_1131	Pocillopora_meandrina_HIv1___Sc0000002	12847776	12848204	429	203	61	0.9704433497536946	+	UGCGAUACCGGUGCAGUGCUCUACCAAUU	48	21	171	5	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12849337-12849760	Cluster_1132	Pocillopora_meandrina_HIv1___Sc0000002	12849337	12849760	424	452	57	0.004424778761061947	-	UUUGAGGCCUUGAACUUGCAGACA	58	57	1	21	80	154	139	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12946840-12947268	Cluster_1133	Pocillopora_meandrina_HIv1___Sc0000002	12946840	12947268	429	430	113	0.9744186046511628	+	UGUAGAAUCAAUCUGUUACUAAGACACC	102	2	415	7	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12947409-12947849	Cluster_1134	Pocillopora_meandrina_HIv1___Sc0000002	12947409	12947849	441	349	181	0.6532951289398281	.	UACCGACCUAUAUCCUUGCUUAGU	20	13	256	9	5	15	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12948047-12948462	Cluster_1135	Pocillopora_meandrina_HIv1___Sc0000002	12948047	12948462	416	187	124	0.8128342245989305	+	UACUUCUAACAGCGUUUCUUUUAGCUCU	8	3	162	1	7	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12949694-12950122	Cluster_1136	Pocillopora_meandrina_HIv1___Sc0000002	12949694	12950122	429	156	62	0.0641025641025641	-	UAAGAUAUCGUUAACAACUCGAAGAAGCG	17	1	151	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:12972851-12973278	Cluster_1137	Pocillopora_meandrina_HIv1___Sc0000002	12972851	12973278	428	312	184	0.625	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	34	74	185	20	7	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13203511-13203925	Cluster_1138	Pocillopora_meandrina_HIv1___Sc0000002	13203511	13203925	415	80	8	0.95	+	CGUGACCGAUCCCGU	72	79	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13260092-13260514	Cluster_1139	Pocillopora_meandrina_HIv1___Sc0000002	13260092	13260514	423	124	48	0.1532258064516129	-	AUUCCGGUUACCGAGAUCUCGGU	40	9	17	4	15	76	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13280874-13281378	Cluster_1140	Pocillopora_meandrina_HIv1___Sc0000002	13280874	13281378	505	859	300	0.0	-	AGGAAGUGAUGUUGUAAUUUGCA	48	286	321	30	85	106	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13313713-13314217	Cluster_1141	Pocillopora_meandrina_HIv1___Sc0000002	13313713	13314217	505	1704	566	0.9988262910798122	+	GUGGUUUGUGGGAACA	42	564	573	103	146	187	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13354139-13354564	Cluster_1142	Pocillopora_meandrina_HIv1___Sc0000002	13354139	13354564	426	137	47	0.029197080291970802	-	UUGGUGCAUUUCGAUCCUUGCUGUUC	27	2	130	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13453547-13453972	Cluster_1143	Pocillopora_meandrina_HIv1___Sc0000002	13453547	13453972	426	194	48	0.31443298969072164	.	UGAUCUACAUGAAACUAUUCUCACACC	34	0	183	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13526669-13527088	Cluster_1144	Pocillopora_meandrina_HIv1___Sc0000002	13526669	13527088	420	1465	35	0.0013651877133105802	-	CGGCCUGAAAAAAAAAA	1030	1396	28	19	5	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13553543-13553957	Cluster_1145	Pocillopora_meandrina_HIv1___Sc0000002	13553543	13553957	415	1172	25	0.0	-	CUUUCCGAGGUCACG	1144	1150	14	3	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13646850-13647264	Cluster_1146	Pocillopora_meandrina_HIv1___Sc0000002	13646850	13647264	415	104	14	0.04807692307692308	-	CCGUGUUGUAGGCUA	84	102	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13698199-13698626	Cluster_1147	Pocillopora_meandrina_HIv1___Sc0000002	13698199	13698626	428	224	92	0.9955357142857143	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	32	0	223	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13773137-13773566	Cluster_1148	Pocillopora_meandrina_HIv1___Sc0000002	13773137	13773566	430	803	63	0.0224159402241594	-	GUGUAGAUCAGCCGACUUCAACAUGUUUCA	329	5	785	5	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:13812879-13813306	Cluster_1149	Pocillopora_meandrina_HIv1___Sc0000002	13812879	13813306	428	161	13	0.9875776397515528	+	UCGAGACGUGAGCUUGGGCCGCCUGUGA	113	0	161	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14200611-14201078	Cluster_1150	Pocillopora_meandrina_HIv1___Sc0000002	14200611	14201078	468	344	144	0.4069767441860465	.	AAUGGGAAAACGAGAAUAGCGUA	57	20	198	16	3	75	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14203895-14204322	Cluster_1151	Pocillopora_meandrina_HIv1___Sc0000002	14203895	14204322	428	135	58	0.1111111111111111	-	UGUAUUUGCUGAUCUAUUUGACAUCCUU	22	7	121	0	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14286362-14286775	Cluster_1152	Pocillopora_meandrina_HIv1___Sc0000002	14286362	14286775	414	129	88	0.9922480620155039	+	GACGGAGAAAGUGGAGCA	11	46	35	13	6	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14380365-14380782	Cluster_1153	Pocillopora_meandrina_HIv1___Sc0000002	14380365	14380782	418	120	65	0.6083333333333333	.	UGGACUCACAGUCGGACGGU	13	92	3	20	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14495754-14496184	Cluster_1154	Pocillopora_meandrina_HIv1___Sc0000002	14495754	14496184	431	569	50	0.9982425307557118	+	UACUAAGUAGGUGCCUUCGAGAUGUUUA	153	2	564	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14748982-14749487	Cluster_1155	Pocillopora_meandrina_HIv1___Sc0000002	14748982	14749487	506	583	165	0.7564322469982847	.	UUGGAACGUGUUGCUGAACGCUUGCG	99	47	464	9	32	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14800683-14801120	Cluster_1156	Pocillopora_meandrina_HIv1___Sc0000002	14800683	14801120	438	3119	308	0.0019236934915036871	-	UGUGACUGAAAAGAUCUUGAAGGAAUUUA	1447	52	2640	29	23	81	294	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14803374-14803892	Cluster_1157	Pocillopora_meandrina_HIv1___Sc0000002	14803374	14803892	519	395	208	0.04556962025316456	-	AACACUGUCAUUGUUGAAUCAGAUGAAGAC	14	27	330	7	7	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14810100-14810529	Cluster_1158	Pocillopora_meandrina_HIv1___Sc0000002	14810100	14810529	430	231	103	0.5021645021645021	.	ACCCGGUCAAUUUUGCGUCAAAAAUAAUUU	20	5	183	4	1	7	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14815557-14815984	Cluster_1159	Pocillopora_meandrina_HIv1___Sc0000002	14815557	14815984	428	172	43	0.9534883720930233	+	UGAUUAAGAACGAUAAACUGGAACGUG	35	2	167	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14816225-14817586	Cluster_1160	Pocillopora_meandrina_HIv1___Sc0000002	14816225	14817586	1362	1458	554	0.7770919067215364	.	UGGGAAACGGCUGUACUCGUCUAUGACGACC	64	8	1299	4	6	33	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14818833-14819261	Cluster_1161	Pocillopora_meandrina_HIv1___Sc0000002	14818833	14819261	429	220	124	0.4954545454545455	.	GCAAAUCGAAAUGAUGGUCGACUCCGGUGC	14	3	212	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14914672-14915087	Cluster_1162	Pocillopora_meandrina_HIv1___Sc0000002	14914672	14915087	416	148	94	0.5472972972972973	.	UUAUUUCUACAUAGAGUGAGCUCACAC	25	28	98	8	2	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14921910-14922397	Cluster_1163	Pocillopora_meandrina_HIv1___Sc0000002	14921910	14922397	488	557	98	0.010771992818671455	-	UUCAGAAUGAUCCUAGAUACGAACAUAGUC	57	1	540	2	3	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14957498-14958006	Cluster_1164	Pocillopora_meandrina_HIv1___Sc0000002	14957498	14958006	509	3449	264	0.06755581327921137	-	UACAGAACUAGACAACUAUAACAUAACGACU	1452	61	3187	0	25	134	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:14968554-14968981	Cluster_1165	Pocillopora_meandrina_HIv1___Sc0000002	14968554	14968981	428	192	74	0.7395833333333334	.	UUCAUGCUCUCGUUGUUCGACUGAACG	30	4	168	0	1	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15113131-15113638	Cluster_1166	Pocillopora_meandrina_HIv1___Sc0000002	15113131	15113638	508	621	161	0.8051529790660226	+	UCGGUUUUCGCAAUUCCAUUGAACGACA	71	8	583	2	6	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15290742-15291230	Cluster_1167	Pocillopora_meandrina_HIv1___Sc0000002	15290742	15291230	489	3578	530	0.9997205142537731	+	CACGUGACCUCUCUGAUCCUG	142	1043	1636	320	175	209	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15324522-15325223	Cluster_1168	Pocillopora_meandrina_HIv1___Sc0000002	15324522	15325223	702	253	135	0.932806324110672	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	25	2	243	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15326453-15326881	Cluster_1169	Pocillopora_meandrina_HIv1___Sc0000002	15326453	15326881	429	247	142	0.8380566801619433	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	28	5	221	1	2	2	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15410169-15410610	Cluster_1170	Pocillopora_meandrina_HIv1___Sc0000002	15410169	15410610	442	680	163	0.17941176470588235	-	UCCUUCACUCCAGAAUGUUUGGCCUCU	71	9	601	1	3	34	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15749261-15749351	Cluster_1171	Pocillopora_meandrina_HIv1___Sc0000002	15749261	15749351	91	266	34	1.0	+	ACGCUAGGAAGGGAUGCCGGGA	162	11	4	32	199	18	2	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:15762578-15763408	Cluster_1172	Pocillopora_meandrina_HIv1___Sc0000002	15762578	15763408	831	4875	324	0.00020512820512820512	-	UGUUACCAGGUACUUCGCACUGA	1776	310	97	165	1344	2723	236	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15781900-15782431	Cluster_1173	Pocillopora_meandrina_HIv1___Sc0000002	15781900	15782431	532	533	186	0.0	-	AUGGAGGGUUAAGAAAGGGGAU	32	153	185	31	80	27	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15893987-15894539	Cluster_1174	Pocillopora_meandrina_HIv1___Sc0000002	15893987	15894539	553	238	79	0.9201680672268907	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	42	4	212	0	4	15	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15894892-15895490	Cluster_1175	Pocillopora_meandrina_HIv1___Sc0000002	15894892	15895490	599	1483	282	0.8071476736345247	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	485	9	1411	0	8	9	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15992083-15992491	Cluster_1176	Pocillopora_meandrina_HIv1___Sc0000002	15992083	15992491	409	240	124	0.9375	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	26	2	226	0	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15992813-15993292	Cluster_1177	Pocillopora_meandrina_HIv1___Sc0000002	15992813	15993292	480	312	130	0.8910256410256411	+	UCCAAUCACACACAGUUCUCCUGCGGC	57	1	299	1	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15993376-15993916	Cluster_1178	Pocillopora_meandrina_HIv1___Sc0000002	15993376	15993916	541	353	151	0.6770538243626062	.	UGCUUCAUUUUGGUUCUGUAGUAACACA	44	16	260	2	41	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:15994673-15996217	Cluster_1179	Pocillopora_meandrina_HIv1___Sc0000002	15994673	15996217	1545	3353	847	0.9260363853265732	+	UAAGAUUUACACACUGAUCGACCAUGU	867	34	3184	27	8	39	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16076887-16077338	Cluster_1180	Pocillopora_meandrina_HIv1___Sc0000002	16076887	16077338	452	6213	194	0.014646708514405278	-	AUCUGUGGUUUUUUUAGGGUGG	1552	2174	5	478	3288	249	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16084908-16085406	Cluster_1181	Pocillopora_meandrina_HIv1___Sc0000002	16084908	16085406	499	9518	556	1.0	+	CUGAGACGAAGCAAACUGAUAUUU	3483	256	2892	116	364	1468	4422	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16086693-16087210	Cluster_1182	Pocillopora_meandrina_HIv1___Sc0000002	16086693	16087210	518	1321	385	0.9992429977289932	+	UGAGACGAAGCAAACUGAAAUUA	120	225	444	71	172	232	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16106559-16106650	Cluster_1183	Pocillopora_meandrina_HIv1___Sc0000002	16106559	16106650	92	2896	100	1.0	+	UGUUAUUUUUAUCGUCCAUUAGU	1136	1031	9	61	201	1564	30	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000002:16165332-16165746	Cluster_1184	Pocillopora_meandrina_HIv1___Sc0000002	16165332	16165746	415	75	4	1.0	+	GAUGAGGCUCAUAAAC	63	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16801047-16801473	Cluster_1185	Pocillopora_meandrina_HIv1___Sc0000002	16801047	16801473	427	257	150	0.14785992217898833	-	UGAGUCGAGGUUAUUCACAAUACGAGC	40	9	223	2	4	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16868237-16868878	Cluster_1186	Pocillopora_meandrina_HIv1___Sc0000002	16868237	16868878	642	693	275	0.004329004329004329	-	UCCGGCUCGAAGGACCA	102	276	401	1	4	5	6	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000002:16938840-16939269	Cluster_1187	Pocillopora_meandrina_HIv1___Sc0000002	16938840	16939269	430	254	52	0.9960629921259843	+	UGAUCAAUUUGUGAAUGUCUGCACACCACU	82	0	253	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16988102-16988565	Cluster_1188	Pocillopora_meandrina_HIv1___Sc0000002	16988102	16988565	464	344	207	0.5145348837209303	.	UUUCGAGACGUCGCGACGGU	19	164	94	66	10	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:16990790-16991216	Cluster_1189	Pocillopora_meandrina_HIv1___Sc0000002	16990790	16991216	427	166	76	0.927710843373494	+	UGAUAUAAAUUACGUCAUAUGGAAUGUAUU	44	7	149	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17295508-17295925	Cluster_1190	Pocillopora_meandrina_HIv1___Sc0000002	17295508	17295925	418	1013	11	0.0009871668311944718	-	CUUUGCUCUGAAGUGGAA	470	1013	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17411376-17411793	Cluster_1191	Pocillopora_meandrina_HIv1___Sc0000002	17411376	17411793	418	351	262	0.9943019943019943	+	UUGGAUCGUGAGUAAGACGCA	7	137	115	27	33	14	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17466039-17466455	Cluster_1192	Pocillopora_meandrina_HIv1___Sc0000002	17466039	17466455	417	730	52	0.9821917808219178	+	GAGACUUGAAGCGGUC	431	720	2	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17509523-17509939	Cluster_1193	Pocillopora_meandrina_HIv1___Sc0000002	17509523	17509939	417	171	28	0.005847953216374269	-	GCCCGGCUAACUCAGUC	43	171	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17612844-17613360	Cluster_1194	Pocillopora_meandrina_HIv1___Sc0000002	17612844	17613360	517	1082	193	0.9621072088724584	+	UGGAAUAUAGUCCAGGUCUUUCUGAU	170	25	1032	10	7	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17766802-17767230	Cluster_1195	Pocillopora_meandrina_HIv1___Sc0000002	17766802	17767230	429	127	50	0.968503937007874	+	UCAAGAUCUUCCUCUUUGUCGUACCCGGA	59	12	113	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17800797-17801407	Cluster_1196	Pocillopora_meandrina_HIv1___Sc0000002	17800797	17801407	611	421	196	0.5510688836104513	.	CGCAUCUUUAUCCAUCACUCAAAGCGGACU	52	6	369	4	7	11	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17801599-17802229	Cluster_1197	Pocillopora_meandrina_HIv1___Sc0000002	17801599	17802229	631	475	165	0.06526315789473684	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	66	4	461	1	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:17948195-17948610	Cluster_1198	Pocillopora_meandrina_HIv1___Sc0000002	17948195	17948610	416	112	16	0.9821428571428571	+	UAUGGACUAUGAUUUU	36	110	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18030662-18031077	Cluster_1199	Pocillopora_meandrina_HIv1___Sc0000002	18030662	18031077	416	776	20	0.002577319587628866	-	UAGGGUGCUGUCGGCU	663	775	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18043378-18043918	Cluster_1200	Pocillopora_meandrina_HIv1___Sc0000002	18043378	18043918	541	2163	265	1.0	+	GUGGUUUUAAUUCUUGUGAACAGGA	857	41	1778	33	64	84	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18048282-18048697	Cluster_1201	Pocillopora_meandrina_HIv1___Sc0000002	18048282	18048697	416	125	4	0.0	-	GACGAAUCGUGCGGCU	83	124	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18085264-18085716	Cluster_1202	Pocillopora_meandrina_HIv1___Sc0000002	18085264	18085716	453	502	111	0.9681274900398407	+	UAACUAGAUUCCACAUCAACAUU	104	39	33	58	71	274	27	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18091097-18091514	Cluster_1203	Pocillopora_meandrina_HIv1___Sc0000002	18091097	18091514	418	188	110	0.005319148936170213	-	AACGUGCUGGAGAGCU	15	114	54	1	9	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18252136-18252552	Cluster_1204	Pocillopora_meandrina_HIv1___Sc0000002	18252136	18252552	417	551	29	0.0	-	GAGACUUGAAGCGGC	228	545	5	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18758455-18758954	Cluster_1205	Pocillopora_meandrina_HIv1___Sc0000002	18758455	18758954	500	701	250	0.017118402282453638	-	UGUGAAUUUACUGACCAUCUCGACAUU	44	9	671	1	4	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:18981108-18982145	Cluster_1206	Pocillopora_meandrina_HIv1___Sc0000002	18981108	18982145	1038	6826	1046	0.027688250805742748	-	UGAAAACUCUUUGCGAUCUCAUUUAUGG	398	40	6564	58	56	57	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19001494-19001914	Cluster_1207	Pocillopora_meandrina_HIv1___Sc0000002	19001494	19001914	421	100	19	0.02	-	UGGGCUGAAAUCAUACACGGG	55	14	7	69	1	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19017321-19017749	Cluster_1208	Pocillopora_meandrina_HIv1___Sc0000002	19017321	19017749	429	106	16	0.0	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	46	0	106	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19137193-19137621	Cluster_1209	Pocillopora_meandrina_HIv1___Sc0000002	19137193	19137621	429	235	113	0.3829787234042553	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	44	12	207	4	4	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19218600-19219028	Cluster_1210	Pocillopora_meandrina_HIv1___Sc0000002	19218600	19219028	429	470	95	0.9787234042553191	+	UGUUUCAACUCUUGAAUGAUUCUUGCUU	99	1	460	3	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19227899-19228326	Cluster_1211	Pocillopora_meandrina_HIv1___Sc0000002	19227899	19228326	428	137	41	0.8321167883211679	+	UUGUCUACAAGAAGCUUGACCAUUUUGU	57	4	131	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19229617-19230339	Cluster_1212	Pocillopora_meandrina_HIv1___Sc0000002	19229617	19230339	723	1716	316	0.18006993006993008	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	469	50	1611	15	14	15	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19355646-19356061	Cluster_1213	Pocillopora_meandrina_HIv1___Sc0000002	19355646	19356061	416	129	17	0.015503875968992248	-	GAUUUGGACGGAGCUU	59	127	0	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19433383-19433794	Cluster_1214	Pocillopora_meandrina_HIv1___Sc0000002	19433383	19433794	412	123	81	1.0	+	CUGAGGACUGGGGUGCC	8	74	31	6	7	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19435173-19435583	Cluster_1215	Pocillopora_meandrina_HIv1___Sc0000002	19435173	19435583	411	251	170	0.900398406374502	+	GUGCGUCGUCAAGCUGUA	8	118	90	12	6	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19445465-19445883	Cluster_1216	Pocillopora_meandrina_HIv1___Sc0000002	19445465	19445883	419	250	153	0.988	+	CAAGGCUGUGCUUUGUUGUAAUGUACU	17	70	118	15	19	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19461155-19461570	Cluster_1217	Pocillopora_meandrina_HIv1___Sc0000002	19461155	19461570	416	189	26	0.06349206349206349	-	AGGGCGAUCUGGCUG	66	178	3	4	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19537005-19537432	Cluster_1218	Pocillopora_meandrina_HIv1___Sc0000002	19537005	19537432	428	92	27	0.010869565217391304	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	2	88	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19538138-19538717	Cluster_1219	Pocillopora_meandrina_HIv1___Sc0000002	19538138	19538717	580	3526	648	0.9997163925127623	+	UUGGAUUGUUGGAGUGAUGUGCA	329	1174	1341	129	184	489	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19565330-19565759	Cluster_1220	Pocillopora_meandrina_HIv1___Sc0000002	19565330	19565759	430	276	73	0.0036231884057971015	-	GAAUGGAACAAAAGUCGAGGCAGUAUGUG	75	16	248	7	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000002:19694521-19694936	Cluster_1221	Pocillopora_meandrina_HIv1___Sc0000002	19694521	19694936	416	84	6	1.0	+	GAGUGAGCUCUUAACUA	42	84	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:96476-96895	Cluster_1222	Pocillopora_meandrina_HIv1___Sc0000003	96476	96895	420	233	13	0.012875536480686695	-	CGGUCUGCAAUUUUGGGAGC	159	193	0	39	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:128494-128904	Cluster_1223	Pocillopora_meandrina_HIv1___Sc0000003	128494	128904	411	163	117	0.9938650306748467	+	GUGGGCUGUGCCUUGGCU	8	71	46	18	11	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:174205-175182	Cluster_1224	Pocillopora_meandrina_HIv1___Sc0000003	174205	175182	978	806	288	0.05707196029776675	-	UGAUCAAGUUUCCUAUCGCCUGUAAACACU	86	10	763	5	4	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:207738-208184	Cluster_1225	Pocillopora_meandrina_HIv1___Sc0000003	207738	208184	447	622	77	0.7331189710610932	.	GCACCAAUCAGAGCUGUAGAAAAACAACU	215	10	605	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:295505-296483	Cluster_1226	Pocillopora_meandrina_HIv1___Sc0000003	295505	296483	979	1473	369	0.4304141208418194	.	UAAGCCUUUGGAACAACAUCAGUGACAA	121	38	1275	19	14	42	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:313575-314401	Cluster_1227	Pocillopora_meandrina_HIv1___Sc0000003	313575	314401	827	758	329	0.6464379947229552	.	GGACAUACCAAUUCUCGCAGACGU	75	11	561	0	11	32	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:314771-315207	Cluster_1228	Pocillopora_meandrina_HIv1___Sc0000003	314771	315207	437	481	154	0.1288981288981289	-	UCGACUUGUUAAACUCUUCCAUCUGAGUAGU	48	4	453	4	4	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:448958-449506	Cluster_1229	Pocillopora_meandrina_HIv1___Sc0000003	448958	449506	549	857	519	0.9988331388564761	+	GAGCGAUGAUUAAACUAGAGAAAUGAGC	20	216	369	69	73	62	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:467253-467911	Cluster_1230	Pocillopora_meandrina_HIv1___Sc0000003	467253	467911	659	764	191	0.0	-	GAGCUGUGACGAAAUAUAUGU	106	263	174	160	91	32	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:469256-469663	Cluster_1231	Pocillopora_meandrina_HIv1___Sc0000003	469256	469663	408	80	48	0.0	-	GACAUCUCGGCUUCUGAGU	5	40	23	3	5	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:495066-495158	Cluster_1232	Pocillopora_meandrina_HIv1___Sc0000003	495066	495158	93	986	75	0.9989858012170385	+	UAUAUUGUACGACUCUCAUCGU	425	93	6	13	664	166	44	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000003:788738-789165	Cluster_1233	Pocillopora_meandrina_HIv1___Sc0000003	788738	789165	428	192	70	0.041666666666666664	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	53	0	186	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:875032-875434	Cluster_1234	Pocillopora_meandrina_HIv1___Sc0000003	875032	875434	403	144	100	0.9444444444444444	+	UUCUGGGGCGCUUCA	18	74	35	9	8	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:879188-879850	Cluster_1235	Pocillopora_meandrina_HIv1___Sc0000003	879188	879850	663	1043	444	0.9961649089165868	+	UGGAUAGCAUUGCAAGGGACAAUU	78	196	471	72	92	77	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:995869-996282	Cluster_1236	Pocillopora_meandrina_HIv1___Sc0000003	995869	996282	414	90	17	0.011111111111111112	-	GAGACUUGAAGCGGGU	56	80	3	1	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1018756-1019619	Cluster_1237	Pocillopora_meandrina_HIv1___Sc0000003	1018756	1019619	864	1494	451	0.5421686746987951	.	UGAUAUUCUGAAUAUUAAAUGAAGGGA	127	31	1301	31	17	28	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1267920-1268335	Cluster_1238	Pocillopora_meandrina_HIv1___Sc0000003	1267920	1268335	416	141	25	0.0070921985815602835	-	AAACUAGGACUAAGUG	63	138	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1282213-1282627	Cluster_1239	Pocillopora_meandrina_HIv1___Sc0000003	1282213	1282627	415	115	16	0.0	-	GAGUUCUACAGUCCGA	44	113	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1364281-1364948	Cluster_1240	Pocillopora_meandrina_HIv1___Sc0000003	1364281	1364948	668	3234	1241	0.9768089053803339	+	GCUUAGCGCACGGUAGAGA	190	1380	937	262	287	187	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1709656-1710200	Cluster_1241	Pocillopora_meandrina_HIv1___Sc0000003	1709656	1710200	545	601	417	0.9966722129783694	+	GUAGUUGGUUUCAGAAGU	7	168	231	40	62	51	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1751792-1752219	Cluster_1242	Pocillopora_meandrina_HIv1___Sc0000003	1751792	1752219	428	160	88	0.1125	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	21	2	135	3	1	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1752820-1753250	Cluster_1243	Pocillopora_meandrina_HIv1___Sc0000003	1752820	1753250	431	1291	142	0.026336173508907823	-	UGAAACUCUGGUCUGAAAAUAUUUGUC	581	30	1242	9	4	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1932935-1933362	Cluster_1244	Pocillopora_meandrina_HIv1___Sc0000003	1932935	1933362	428	493	56	0.8843813387423936	+	UUGGAACGUGUUGCUGAACGCUUGUUGC	305	10	467	2	2	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1934606-1935033	Cluster_1245	Pocillopora_meandrina_HIv1___Sc0000003	1934606	1935033	428	487	65	0.9856262833675564	+	UGAAGUUAUCCUAAACUGCAGACUUAGC	248	5	476	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:1936185-1936612	Cluster_1246	Pocillopora_meandrina_HIv1___Sc0000003	1936185	1936612	428	646	54	0.015479876160990712	-	UGAAACUCUGAUCUGAAAAUAUUUUUA	435	0	644	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2013814-2014230	Cluster_1247	Pocillopora_meandrina_HIv1___Sc0000003	2013814	2014230	417	133	46	0.3609022556390977	.	UUUGACAACUUUUGACA	80	100	20	3	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2241887-2242315	Cluster_1248	Pocillopora_meandrina_HIv1___Sc0000003	2241887	2242315	429	176	22	0.9375	+	UGGUUUGAUUGUCAGCAGUAGAUGAAAUA	134	0	175	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2476590-2477070	Cluster_1249	Pocillopora_meandrina_HIv1___Sc0000003	2476590	2477070	481	62852	856	0.0066664545280977535	-	AGGAUGGACAGUGAUUCAGAAA	26413	14567	17677	477	29800	122	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2504023-2504437	Cluster_1250	Pocillopora_meandrina_HIv1___Sc0000003	2504023	2504437	415	180	11	0.9888888888888889	+	UACUGUGAAACUGCA	112	180	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2614870-2615287	Cluster_1251	Pocillopora_meandrina_HIv1___Sc0000003	2614870	2615287	418	98	3	0.01020408163265306	-	UUGAACUCGACCCUGUCG	93	97	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2620719-2621157	Cluster_1252	Pocillopora_meandrina_HIv1___Sc0000003	2620719	2621157	439	468	146	0.9551282051282052	+	UCAGUGACUUUUGAGACUAUUGGUAAUAAU	91	11	442	2	5	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2622157-2622586	Cluster_1253	Pocillopora_meandrina_HIv1___Sc0000003	2622157	2622586	430	223	94	0.8699551569506726	+	UGCUCUCGUUGUUGACUGAAGAAUCCAGCC	26	4	213	1	0	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2627197-2627614	Cluster_1254	Pocillopora_meandrina_HIv1___Sc0000003	2627197	2627614	418	97	3	0.9896907216494846	+	UUGAACUCGACCCUGUCG	94	96	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2645319-2645747	Cluster_1255	Pocillopora_meandrina_HIv1___Sc0000003	2645319	2645747	429	151	70	0.9801324503311258	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	35	1	142	0	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2763211-2763631	Cluster_1256	Pocillopora_meandrina_HIv1___Sc0000003	2763211	2763631	421	127	33	0.0	-	UAAUUGUGAUUUUGUACUGUAGAAUAUCCA	17	47	57	6	7	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2763676-2764158	Cluster_1257	Pocillopora_meandrina_HIv1___Sc0000003	2763676	2764158	483	196369	1821	0.9998523188486981	+	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	81038	13377	181976	246	191	222	357	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:2849464-2849893	Cluster_1258	Pocillopora_meandrina_HIv1___Sc0000003	2849464	2849893	430	387	157	0.007751937984496124	-	AGCUGGUGCUGGCCCAUCUAACUACAAGGU	117	49	312	5	6	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3008153-3009652	Cluster_1259	Pocillopora_meandrina_HIv1___Sc0000003	3008153	3009652	1500	13115	1428	0.11971025543271063	-	UUGGCUAGUAGCAUUCUUUCUGAUGGCU	1737	69	12259	42	116	142	487	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3012955-3013646	Cluster_1260	Pocillopora_meandrina_HIv1___Sc0000003	3012955	3013646	692	1215	481	0.22304526748971193	.	UGUUGUCCUUUGUUCAGUCUGAUUAACC	58	15	1085	11	11	43	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3014086-3014511	Cluster_1261	Pocillopora_meandrina_HIv1___Sc0000003	3014086	3014511	426	97	25	1.0	+	GUUGACGUGAACGGUGUUAGAUGCCGAGC	33	1	91	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3014658-3015191	Cluster_1262	Pocillopora_meandrina_HIv1___Sc0000003	3014658	3015191	534	351	190	0.05128205128205128	-	UGAAUUCUUCGUAAACGGUUUCCUGGUC	27	2	340	1	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3015890-3016320	Cluster_1263	Pocillopora_meandrina_HIv1___Sc0000003	3015890	3016320	431	189	54	0.026455026455026454	-	UAUAUCUUCUUCGGACGCCCACGGCGCGCGA	55	0	184	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3033168-3033596	Cluster_1264	Pocillopora_meandrina_HIv1___Sc0000003	3033168	3033596	429	241	92	0.0954356846473029	-	UUCAAGCUCUUCUGGACUAGCAAUCUGCA	38	3	223	8	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3033675-3034111	Cluster_1265	Pocillopora_meandrina_HIv1___Sc0000003	3033675	3034111	437	390	162	0.24871794871794872	.	UGCUUCUCAUAGUCUGUUGGGUUCUUAAC	85	6	351	2	2	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3035420-3036545	Cluster_1266	Pocillopora_meandrina_HIv1___Sc0000003	3035420	3036545	1126	4681	730	0.3195898312326426	.	UCUAGAGACAUCAUCCCUGUGUAGAAACU	705	36	3896	33	126	110	480	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3036793-3037216	Cluster_1267	Pocillopora_meandrina_HIv1___Sc0000003	3036793	3037216	424	85	26	0.023529411764705882	-	UCGAAAUUGUUGUACUGCUGGAGUCGCA	38	0	79	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3048099-3049122	Cluster_1268	Pocillopora_meandrina_HIv1___Sc0000003	3048099	3049122	1024	1866	455	0.14469453376205788	-	UCUUUCUGGUUUUGUUUUUCGACGUAUC	151	17	1738	13	12	27	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3062518-3063909	Cluster_1269	Pocillopora_meandrina_HIv1___Sc0000003	3062518	3063909	1392	2341	750	0.1670226398974797	-	UGAAGAACAGAAUAUGGGUAGUCCAUGG	151	26	2126	15	16	42	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3187007-3187432	Cluster_1270	Pocillopora_meandrina_HIv1___Sc0000003	3187007	3187432	426	76	16	0.039473684210526314	-	CGAUCCAACAAGAACAAUAUGUGCUGACU	25	1	75	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3212023-3212452	Cluster_1271	Pocillopora_meandrina_HIv1___Sc0000003	3212023	3212452	430	194	62	0.07731958762886598	-	UCAGGCCAUGACUCUACAUCUGCUAGUAGC	36	5	174	0	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3214051-3214561	Cluster_1272	Pocillopora_meandrina_HIv1___Sc0000003	3214051	3214561	511	288	93	0.5868055555555556	.	AGAAAUACUAGCUGUUCAACUCAACAA	65	12	261	6	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3216178-3216584	Cluster_1273	Pocillopora_meandrina_HIv1___Sc0000003	3216178	3216584	407	75	23	0.013333333333333334	-	UUAUUUCCUUGUAUUUCUUUAGAACUUGUA	22	1	71	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3221779-3222319	Cluster_1274	Pocillopora_meandrina_HIv1___Sc0000003	3221779	3222319	541	501	156	0.8083832335329342	+	UCGAUGUUACUGUCCGUUCUCCGUUGA	82	9	416	11	8	36	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3228849-3229280	Cluster_1275	Pocillopora_meandrina_HIv1___Sc0000003	3228849	3229280	432	788	92	0.9974619289340102	+	CUUGGAAGUGUUAUCUGCCGGUCGGCCUUU	381	15	748	5	5	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3303172-3303600	Cluster_1276	Pocillopora_meandrina_HIv1___Sc0000003	3303172	3303600	429	1764	89	0.0	-	CGAUCCAACAAGAACAAUAUGUGCUGACU	1391	2	1757	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3347409-3347835	Cluster_1277	Pocillopora_meandrina_HIv1___Sc0000003	3347409	3347835	427	162	70	0.37037037037037035	.	UGUACUGUUUGUAUUUUUUUUCCUGGGC	26	3	145	2	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3358566-3358981	Cluster_1278	Pocillopora_meandrina_HIv1___Sc0000003	3358566	3358981	416	265	17	0.011320754716981131	-	UUCCGAGGUCGCGCUU	218	261	3	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3438712-3439138	Cluster_1279	Pocillopora_meandrina_HIv1___Sc0000003	3438712	3439138	427	150	50	0.96	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	1	141	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3439687-3440217	Cluster_1280	Pocillopora_meandrina_HIv1___Sc0000003	3439687	3440217	531	370	138	0.8297297297297297	+	UGUUGGCUGCAUUCUUUUAAAAGACGU	46	11	300	1	4	25	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3505320-3505735	Cluster_1281	Pocillopora_meandrina_HIv1___Sc0000003	3505320	3505735	416	164	14	0.9939024390243902	+	UAUAGACUUGGAAGC	60	158	6	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3758358-3758771	Cluster_1282	Pocillopora_meandrina_HIv1___Sc0000003	3758358	3758771	414	160	110	0.01875	-	UUAAGGGCUAACUCAUU	8	64	51	13	15	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3760949-3761352	Cluster_1283	Pocillopora_meandrina_HIv1___Sc0000003	3760949	3761352	404	121	80	0.0	-	CAUGCAGAUCUUUGUCAAAACCCU	7	46	35	8	7	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3898050-3898465	Cluster_1284	Pocillopora_meandrina_HIv1___Sc0000003	3898050	3898465	416	181	6	1.0	+	UGGCCUGAAAAAAAAA	164	181	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3989630-3990134	Cluster_1285	Pocillopora_meandrina_HIv1___Sc0000003	3989630	3990134	505	305	154	0.2819672131147541	.	UUGUGGUUCAAUGGGAAAACGAGAACA	18	20	198	7	7	13	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:3990736-3991161	Cluster_1286	Pocillopora_meandrina_HIv1___Sc0000003	3990736	3991161	426	80	20	0.0375	-	UGAAACUCUGAUCUGAAAAUAUUUUU	30	0	80	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4427879-4428306	Cluster_1287	Pocillopora_meandrina_HIv1___Sc0000003	4427879	4428306	428	166	58	0.05421686746987952	-	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	58	10	149	2	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4502940-4503367	Cluster_1288	Pocillopora_meandrina_HIv1___Sc0000003	4502940	4503367	428	188	63	0.9414893617021277	+	UUAAAUGGCUUGUAAUGACUAAUAAACA	42	0	186	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4503513-4504274	Cluster_1289	Pocillopora_meandrina_HIv1___Sc0000003	4503513	4504274	762	1114	424	0.6696588868940754	.	CUACAGAAAAUACAAACCGAUUGU	51	6	983	3	4	10	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4505511-4506569	Cluster_1290	Pocillopora_meandrina_HIv1___Sc0000003	4505511	4506569	1059	4959	1062	0.8471466021375277	+	UCCGUGUCAACAUAUUGUAUUUCAAAGU	540	28	4597	16	45	130	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4619797-4620224	Cluster_1291	Pocillopora_meandrina_HIv1___Sc0000003	4619797	4620224	428	163	59	0.024539877300613498	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	48	0	151	0	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4842828-4843448	Cluster_1292	Pocillopora_meandrina_HIv1___Sc0000003	4842828	4843448	621	519	172	0.030828516377649325	-	UGAUAAUGUUUGAAAGCUGUUGCUGUUC	107	3	508	0	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4945307-4945849	Cluster_1293	Pocillopora_meandrina_HIv1___Sc0000003	4945307	4945849	543	582	220	0.16666666666666666	-	UGAAAAACCUUCCACGUCAAUCUGGCUCAGA	72	9	537	3	2	18	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4946513-4946940	Cluster_1294	Pocillopora_meandrina_HIv1___Sc0000003	4946513	4946940	428	186	83	0.016129032258064516	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	2	171	2	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:4969638-4970055	Cluster_1295	Pocillopora_meandrina_HIv1___Sc0000003	4969638	4970055	418	470	20	0.002127659574468085	-	ACCGUGGUGGACUGCA	164	468	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5028952-5029429	Cluster_1296	Pocillopora_meandrina_HIv1___Sc0000003	5028952	5029429	478	899	235	0.002224694104560623	-	AGUGAAUGAUGUAAAAUCCUGGGUUGCA	63	267	416	45	21	73	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5030876-5031354	Cluster_1297	Pocillopora_meandrina_HIv1___Sc0000003	5030876	5031354	479	1797	459	0.0	-	AGUGAAUGAUGUAAAAUUCUGGGUUGCA	121	615	844	103	65	97	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5148334-5148807	Cluster_1298	Pocillopora_meandrina_HIv1___Sc0000003	5148334	5148807	474	336	134	0.0	-	GUGGCUCGUAAUUUUGACUCAAAUAUGG	84	63	219	8	10	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5182537-5182957	Cluster_1299	Pocillopora_meandrina_HIv1___Sc0000003	5182537	5182957	421	240	179	0.9875	+	GUUGUUUACUGACUGGAUGAUAGCUGU	10	53	111	22	17	15	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5213693-5214108	Cluster_1300	Pocillopora_meandrina_HIv1___Sc0000003	5213693	5214108	416	98	22	0.10204081632653061	-	GUGUGUGCUUACUGACU	43	92	2	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5372310-5372735	Cluster_1301	Pocillopora_meandrina_HIv1___Sc0000003	5372310	5372735	426	295	134	0.8711864406779661	+	UGUGAAUCUUUUUACUCGUUAUGUUA	46	9	262	11	5	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5410933-5411346	Cluster_1302	Pocillopora_meandrina_HIv1___Sc0000003	5410933	5411346	414	90	14	0.9888888888888889	+	CGGGGUGCUGUAGUGA	19	90	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5692287-5693119	Cluster_1303	Pocillopora_meandrina_HIv1___Sc0000003	5692287	5693119	833	611	243	0.9378068739770867	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	61	4	587	2	1	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5694637-5695063	Cluster_1304	Pocillopora_meandrina_HIv1___Sc0000003	5694637	5695063	427	211	110	0.1990521327014218	-	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	10	2	194	1	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5755579-5756010	Cluster_1305	Pocillopora_meandrina_HIv1___Sc0000003	5755579	5756010	432	382	89	1.0	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	78	0	380	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5760135-5760610	Cluster_1306	Pocillopora_meandrina_HIv1___Sc0000003	5760135	5760610	476	72173	1103	1.3855596968395383e-05	-	GCCCGGCUAGCUCAGUCGGUAGAGCAUGA	29752	4511	67338	79	43	72	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5831350-5831779	Cluster_1307	Pocillopora_meandrina_HIv1___Sc0000003	5831350	5831779	430	134	24	0.9850746268656716	+	UUAUGAGUGAACCUUUCAUCGAGAAACAGG	46	0	133	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5911110-5911540	Cluster_1308	Pocillopora_meandrina_HIv1___Sc0000003	5911110	5911540	431	2397	156	0.9941593658740092	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCA	644	4	2378	2	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5965071-5965588	Cluster_1309	Pocillopora_meandrina_HIv1___Sc0000003	5965071	5965588	518	432	247	0.0	-	CUCCGUCUGUGGUGAGCA	22	134	190	33	29	21	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:5965723-5966237	Cluster_1310	Pocillopora_meandrina_HIv1___Sc0000003	5965723	5966237	515	418	288	0.004784688995215311	-	ACAACUCGGGCGAGAUUCA	22	164	119	41	32	38	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6019953-6020383	Cluster_1311	Pocillopora_meandrina_HIv1___Sc0000003	6019953	6020383	431	297	185	0.9696969696969697	+	GAAGAUUGCGGGUUC	11	166	80	20	10	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6086863-6087280	Cluster_1312	Pocillopora_meandrina_HIv1___Sc0000003	6086863	6087280	418	986	49	0.9969574036511156	+	GAGACUUGAAGCGGC	324	986	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6298837-6299251	Cluster_1313	Pocillopora_meandrina_HIv1___Sc0000003	6298837	6299251	415	601	10	0.9966722129783694	+	CCGCGACUGCUGCCA	584	601	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6328548-6328949	Cluster_1314	Pocillopora_meandrina_HIv1___Sc0000003	6328548	6328949	402	161	117	1.0	+	AGACGAGUGAGAGAAAAGACA	6	48	68	16	11	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6386284-6386828	Cluster_1315	Pocillopora_meandrina_HIv1___Sc0000003	6386284	6386828	545	538	342	0.0018587360594795538	-	UCUGUUGUGUCUGAAAGGCUGA	13	203	140	49	58	44	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6424799-6425229	Cluster_1316	Pocillopora_meandrina_HIv1___Sc0000003	6424799	6425229	431	575	64	0.9965217391304347	+	UGACAAUCAUGCUGCUAAGUUCCUACGC	164	2	570	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6520675-6521089	Cluster_1317	Pocillopora_meandrina_HIv1___Sc0000003	6520675	6521089	415	192	21	0.9947916666666666	+	UGUCUGAGUGUCUAU	156	186	2	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6569728-6570155	Cluster_1318	Pocillopora_meandrina_HIv1___Sc0000003	6569728	6570155	428	176	73	0.011363636363636364	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	2	168	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6670538-6670966	Cluster_1319	Pocillopora_meandrina_HIv1___Sc0000003	6670538	6670966	429	302	68	0.9039735099337748	+	GUUUCUGUAGUGUAGUGGUUAUCACGUCC	60	115	175	8	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6672454-6672903	Cluster_1320	Pocillopora_meandrina_HIv1___Sc0000003	6672454	6672903	450	960	192	0.9958333333333333	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	359	75	853	7	9	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6682716-6683131	Cluster_1321	Pocillopora_meandrina_HIv1___Sc0000003	6682716	6683131	416	197	18	1.0	+	GAGACUUGAAGCGGAU	75	191	0	2	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6742429-6742844	Cluster_1322	Pocillopora_meandrina_HIv1___Sc0000003	6742429	6742844	416	188	50	0.7712765957446809	.	AUCGGCCGUGGAUUGU	110	160	15	3	2	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6767980-6768388	Cluster_1323	Pocillopora_meandrina_HIv1___Sc0000003	6767980	6768388	409	190	147	0.005263157894736842	-	GUGACGUGUGAAUGCCAAACCGGUGAAUA	5	49	86	15	10	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6774529-6774948	Cluster_1324	Pocillopora_meandrina_HIv1___Sc0000003	6774529	6774948	420	183	119	0.00546448087431694	-	CGGAACGGAACAUGUUUGUU	14	42	70	19	14	29	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6775673-6776091	Cluster_1325	Pocillopora_meandrina_HIv1___Sc0000003	6775673	6776091	419	109	64	0.01834862385321101	-	GCGGUUCAGAGAAGUAGACA	9	41	24	5	16	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6785513-6785917	Cluster_1326	Pocillopora_meandrina_HIv1___Sc0000003	6785513	6785917	405	111	53	0.018018018018018018	-	UGGGUUCUGUUGGAA	22	74	26	2	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6807042-6807456	Cluster_1327	Pocillopora_meandrina_HIv1___Sc0000003	6807042	6807456	415	102	22	0.9901960784313726	+	GGAAGUCGGCAAAAU	22	102	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6885700-6886302	Cluster_1328	Pocillopora_meandrina_HIv1___Sc0000003	6885700	6886302	603	753	437	0.7675962815405046	.	CGGCUAUAAUGGGAAACCCUGU	29	377	107	111	88	46	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6910359-6911008	Cluster_1329	Pocillopora_meandrina_HIv1___Sc0000003	6910359	6911008	650	390	187	0.9384615384615385	+	UCUACUUCGGAGCCUAGACGU	17	175	105	61	12	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6918909-6919318	Cluster_1330	Pocillopora_meandrina_HIv1___Sc0000003	6918909	6919318	410	241	160	0.8547717842323651	+	GGGGCGAGGAAGAUGGAGC	12	144	34	35	11	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:6988889-6989344	Cluster_1331	Pocillopora_meandrina_HIv1___Sc0000003	6988889	6989344	456	175	86	0.8742857142857143	+	UAUAAAGAUGUUCAUCGGCCCAGUGGCGUGA	12	3	147	2	2	1	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7061737-7062151	Cluster_1332	Pocillopora_meandrina_HIv1___Sc0000003	7061737	7062151	415	166	10	0.0	-	AUGGACUAUAAUUUU	91	166	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7133223-7133650	Cluster_1333	Pocillopora_meandrina_HIv1___Sc0000003	7133223	7133650	428	200	75	0.01	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	30	4	187	0	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7244498-7244926	Cluster_1334	Pocillopora_meandrina_HIv1___Sc0000003	7244498	7244926	429	281	100	0.9430604982206405	+	UACAAACAACAGAACGUUCGAACGGCU	48	15	252	3	4	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7299311-7299720	Cluster_1335	Pocillopora_meandrina_HIv1___Sc0000003	7299311	7299720	410	192	158	0.041666666666666664	-	GAUGUGAACUUAGACUCCCUAGAU	5	53	78	15	9	18	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7299822-7300240	Cluster_1336	Pocillopora_meandrina_HIv1___Sc0000003	7299822	7300240	419	416	312	0.002403846153846154	-	UCAAGAUCAGUUUGCACUUGCGCU	6	129	161	44	26	19	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7300249-7300659	Cluster_1337	Pocillopora_meandrina_HIv1___Sc0000003	7300249	7300659	411	262	178	0.003816793893129771	-	UAACGCAAGUAGAAUAGA	11	90	97	18	18	12	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7353727-7354272	Cluster_1338	Pocillopora_meandrina_HIv1___Sc0000003	7353727	7354272	546	456	291	1.0	+	UUCGGCUUCCUCAGGA	31	213	159	22	29	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7408170-7409498	Cluster_1339	Pocillopora_meandrina_HIv1___Sc0000003	7408170	7409498	1329	1982	1360	0.005045408678102927	-	GAUACUGCUAGUUUUGUUACA	15	641	778	140	149	120	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7409540-7409954	Cluster_1340	Pocillopora_meandrina_HIv1___Sc0000003	7409540	7409954	415	211	142	0.04265402843601896	-	CAUGGACUUCCAGGAAGAUU	5	88	58	16	11	16	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7410474-7410908	Cluster_1341	Pocillopora_meandrina_HIv1___Sc0000003	7410474	7410908	435	485	343	0.002061855670103093	-	CAUCUGUGUGUGUUGAGAAAAACU	10	181	172	34	37	36	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7411420-7411846	Cluster_1342	Pocillopora_meandrina_HIv1___Sc0000003	7411420	7411846	427	361	267	0.002770083102493075	-	UUUAGAGGCUGAACUGGACGAGCCACU	8	118	140	26	24	28	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7412367-7413218	Cluster_1343	Pocillopora_meandrina_HIv1___Sc0000003	7412367	7413218	852	1105	660	0.017194570135746608	-	GACGAUCUGUGGAGGU	20	394	388	74	86	70	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7562319-7562747	Cluster_1344	Pocillopora_meandrina_HIv1___Sc0000003	7562319	7562747	429	103	16	0.02912621359223301	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	36	1	100	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7591882-7592298	Cluster_1345	Pocillopora_meandrina_HIv1___Sc0000003	7591882	7592298	417	99	16	1.0	+	CGGCCUGAAAAAAAAAA	43	95	3	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7599785-7601072	Cluster_1346	Pocillopora_meandrina_HIv1___Sc0000003	7599785	7601072	1288	2911	933	0.5235314324974236	.	UUGGAUCCAUUUACACUUUGUAAUCUGU	142	85	2585	56	20	42	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7622721-7623130	Cluster_1347	Pocillopora_meandrina_HIv1___Sc0000003	7622721	7623130	410	133	65	0.2781954887218045	.	UAAAUCCACCACAGUCCAUAAAUUUGUCAGA	18	1	121	0	4	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7626252-7626678	Cluster_1348	Pocillopora_meandrina_HIv1___Sc0000003	7626252	7626678	427	190	102	0.9578947368421052	+	UGACUGUGUUCCGCCUGUUAUUGUCACC	13	12	166	1	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7633872-7634300	Cluster_1349	Pocillopora_meandrina_HIv1___Sc0000003	7633872	7634300	429	166	62	0.9518072289156626	+	UAAGAUAUCGUUAACAACUCGAAGAAGCA	23	0	163	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7659437-7659861	Cluster_1350	Pocillopora_meandrina_HIv1___Sc0000003	7659437	7659861	425	130	39	0.9923076923076923	+	AAGAUAACCAAUGAAUUCAGCUAAAAAGA	22	5	88	2	1	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7758160-7758574	Cluster_1351	Pocillopora_meandrina_HIv1___Sc0000003	7758160	7758574	415	104	23	0.8942307692307693	+	AUCGUGCCUGGUUGG	34	95	3	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7872076-7872492	Cluster_1352	Pocillopora_meandrina_HIv1___Sc0000003	7872076	7872492	417	399	16	0.9924812030075187	+	CGGCCUAAAAAAAAAA	148	398	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7947458-7947877	Cluster_1353	Pocillopora_meandrina_HIv1___Sc0000003	7947458	7947877	420	321	185	0.0	-	GUUAAGGUUAAGAGCUCCA	25	147	134	10	14	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7948713-7949134	Cluster_1354	Pocillopora_meandrina_HIv1___Sc0000003	7948713	7949134	422	393	280	0.05089058524173028	-	GAAUCGGCCCUGGCU	12	105	150	34	31	33	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:7955162-7955820	Cluster_1355	Pocillopora_meandrina_HIv1___Sc0000003	7955162	7955820	659	543	379	0.0055248618784530384	-	GGAGGAGAUCUUGAACCUGCA	40	222	141	84	29	40	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8162818-8163232	Cluster_1356	Pocillopora_meandrina_HIv1___Sc0000003	8162818	8163232	415	271	21	0.0	-	GUGGUCGAGGCGAAG	233	271	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8175305-8175722	Cluster_1357	Pocillopora_meandrina_HIv1___Sc0000003	8175305	8175722	418	150	19	0.9933333333333333	+	GCUACUUUGACCUCAUUUA	38	148	0	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8251831-8252248	Cluster_1358	Pocillopora_meandrina_HIv1___Sc0000003	8251831	8252248	418	82	26	0.975609756097561	+	GUGGUGAUGAACUUUGAGA	13	32	25	8	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8266188-8266668	Cluster_1359	Pocillopora_meandrina_HIv1___Sc0000003	8266188	8266668	481	437	210	0.0	-	CGGCUGUUAACCGAAAGGUUGGU	19	232	65	26	35	50	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8314379-8314796	Cluster_1360	Pocillopora_meandrina_HIv1___Sc0000003	8314379	8314796	418	1222	11	0.9991816693944353	+	UUUGUAGGCUCUAACAGC	1196	1221	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8365220-8365649	Cluster_1361	Pocillopora_meandrina_HIv1___Sc0000003	8365220	8365649	430	195	85	0.9948717948717949	+	UCUUGAAGCCUUAUCUGCUAGUUUACCUG	28	32	149	6	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8389909-8390326	Cluster_1362	Pocillopora_meandrina_HIv1___Sc0000003	8389909	8390326	418	166	127	1.0	+	CUCGGUGAUCUAGAAACGUAAAAA	6	52	74	8	12	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8391648-8392055	Cluster_1363	Pocillopora_meandrina_HIv1___Sc0000003	8391648	8392055	408	259	209	0.9768339768339769	+	UCUUUGAAGAUUUUCAGGAUGAAGGAUA	6	99	100	14	7	26	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8392372-8393304	Cluster_1364	Pocillopora_meandrina_HIv1___Sc0000003	8392372	8393304	933	1436	854	0.9902506963788301	+	UGAAGACUUUGCAGAAGAUUCUGUCUGUGGA	26	504	546	115	110	88	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8442393-8443320	Cluster_1365	Pocillopora_meandrina_HIv1___Sc0000003	8442393	8443320	928	6440	437	0.43990683229813665	.	UCUUGAACCAAUCUACGACAGACUGAGU	1781	43	6215	62	10	18	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8459705-8460134	Cluster_1366	Pocillopora_meandrina_HIv1___Sc0000003	8459705	8460134	430	613	132	0.9804241435562806	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	131	2	597	1	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8619934-8620349	Cluster_1367	Pocillopora_meandrina_HIv1___Sc0000003	8619934	8620349	416	138	83	0.5579710144927537	.	UUCCGCGUCGAUUGUGUCCAUU	16	71	4	31	27	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8622404-8623297	Cluster_1368	Pocillopora_meandrina_HIv1___Sc0000003	8622404	8623297	894	478	247	0.4100418410041841	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	56	50	376	17	10	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8648200-8648633	Cluster_1369	Pocillopora_meandrina_HIv1___Sc0000003	8648200	8648633	434	417	196	0.2014388489208633	.	UAUGACGUUCCAGAAUCUUUGACAAAA	33	6	393	1	3	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8649171-8649593	Cluster_1370	Pocillopora_meandrina_HIv1___Sc0000003	8649171	8649593	423	121	45	0.01652892561983471	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	19	0	117	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8658110-8658528	Cluster_1371	Pocillopora_meandrina_HIv1___Sc0000003	8658110	8658528	419	2732	43	1.0	+	AAUCGGCCGUGGAUUGGU	1515	2731	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8674321-8674735	Cluster_1372	Pocillopora_meandrina_HIv1___Sc0000003	8674321	8674735	415	236	26	0.8516949152542372	+	CCGGCCCGGACUGAU	137	234	0	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8680824-8681463	Cluster_1373	Pocillopora_meandrina_HIv1___Sc0000003	8680824	8681463	640	258	120	0.03875968992248062	-	UGACGUCCAAACGAGCCUGAUCUUGAUG	14	1	252	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8695585-8696014	Cluster_1374	Pocillopora_meandrina_HIv1___Sc0000003	8695585	8696014	430	821	65	0.9987819732034104	+	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	461	2	815	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8780641-8782374	Cluster_1375	Pocillopora_meandrina_HIv1___Sc0000003	8780641	8782374	1734	2768	1093	0.9595375722543352	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	81	29	2626	8	25	39	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8905394-8905822	Cluster_1376	Pocillopora_meandrina_HIv1___Sc0000003	8905394	8905822	429	171	50	0.9883040935672515	+	UUCCUGCAUCUGUUGAGCCUUCUGACAGU	30	2	166	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8907631-8908059	Cluster_1377	Pocillopora_meandrina_HIv1___Sc0000003	8907631	8908059	429	141	57	0.9787234042553191	+	UAGGUUCUUGUGGAACAACCAGUUGUGCA	27	5	132	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8915298-8915727	Cluster_1378	Pocillopora_meandrina_HIv1___Sc0000003	8915298	8915727	430	170	65	0.9294117647058824	+	CGAAUUCCAAACACCGAACCGCUUUUUGUGC	34	5	153	0	4	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8916616-8917176	Cluster_1379	Pocillopora_meandrina_HIv1___Sc0000003	8916616	8917176	561	327	144	0.22324159021406728	.	UAUCUAUGGCUGACUAUGUCAGUGUCUCU	26	8	291	4	7	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8920685-8921364	Cluster_1380	Pocillopora_meandrina_HIv1___Sc0000003	8920685	8921364	680	3364	467	0.8861474435196195	+	UAAGACCCAUCCAUUGCUAUCAAUUCGC	458	90	3074	36	13	28	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:8969736-8970166	Cluster_1381	Pocillopora_meandrina_HIv1___Sc0000003	8969736	8970166	431	281	109	0.046263345195729534	-	UGAAGAUUCUCAAAGGUUGCUGAUAACUGGC	28	4	266	0	5	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9059675-9060089	Cluster_1382	Pocillopora_meandrina_HIv1___Sc0000003	9059675	9060089	415	76	3	0.0	-	CCCGUGUCGGAGCCA	73	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9071829-9072246	Cluster_1383	Pocillopora_meandrina_HIv1___Sc0000003	9071829	9072246	418	351	36	0.002849002849002849	-	GACUUGAAGCGGUUGGAA	159	351	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9135605-9136019	Cluster_1384	Pocillopora_meandrina_HIv1___Sc0000003	9135605	9136019	415	149	8	0.0	-	GUGCUUGGGAUCUGA	116	148	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9149635-9150114	Cluster_1385	Pocillopora_meandrina_HIv1___Sc0000003	9149635	9150114	480	553	165	0.8842676311030742	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	53	14	321	8	7	64	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9215663-9216078	Cluster_1386	Pocillopora_meandrina_HIv1___Sc0000003	9215663	9216078	416	150	20	0.006666666666666667	-	CGUGUGCUCUUAACGG	65	149	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9291033-9292804	Cluster_1387	Pocillopora_meandrina_HIv1___Sc0000003	9291033	9292804	1772	2797	1123	0.9520915266356811	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	102	30	2646	11	21	43	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9320593-9321008	Cluster_1388	Pocillopora_meandrina_HIv1___Sc0000003	9320593	9321008	416	170	14	0.0	-	UGCUCUGAAGUGGAA	79	167	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9403760-9404178	Cluster_1389	Pocillopora_meandrina_HIv1___Sc0000003	9403760	9404178	419	3604	68	0.0005549389567147614	-	AUCGGCCGUGGAUUGGU	2119	3603	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9521091-9521507	Cluster_1390	Pocillopora_meandrina_HIv1___Sc0000003	9521091	9521507	417	82	36	1.0	+	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	14	1	76	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9565787-9566383	Cluster_1391	Pocillopora_meandrina_HIv1___Sc0000003	9565787	9566383	597	5624	518	0.9975106685633002	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	841	18	5559	2	3	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9657566-9657995	Cluster_1392	Pocillopora_meandrina_HIv1___Sc0000003	9657566	9657995	430	379	100	0.9472295514511874	+	UGAGUGAGAUAAAUGAAAACCUUUGGAGA	41	3	368	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9699669-9700425	Cluster_1393	Pocillopora_meandrina_HIv1___Sc0000003	9699669	9700425	757	1455	321	0.9085910652920962	+	UGAGUGAGAUAAAUGAAAACCUUUGGAGA	82	44	1286	16	14	25	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9709233-9709736	Cluster_1394	Pocillopora_meandrina_HIv1___Sc0000003	9709233	9709736	504	3619	274	0.9903288201160542	+	UGGAACAACCUUUCGACUGACGAUCUC	752	16	3545	3	40	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9744415-9744843	Cluster_1395	Pocillopora_meandrina_HIv1___Sc0000003	9744415	9744843	429	279	140	0.34767025089605735	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	48	30	227	8	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9751847-9752327	Cluster_1396	Pocillopora_meandrina_HIv1___Sc0000003	9751847	9752327	481	6062	284	0.9991751897063675	+	UGUAUCGAUGUAAUCUCUCCAGUUUGUGUU	1598	54	5958	6	3	8	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9758869-9759696	Cluster_1397	Pocillopora_meandrina_HIv1___Sc0000003	9758869	9759696	828	1247	304	0.0008019246190858059	-	UACAUGUCUCGGGGUAGCCGAUCUCGGA	271	25	1204	1	1	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9762294-9762711	Cluster_1398	Pocillopora_meandrina_HIv1___Sc0000003	9762294	9762711	418	115	62	0.7043478260869566	.	AAUCGUGAUACUGUGAGCGAAAACGACCGU	13	1	100	1	3	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9768332-9768759	Cluster_1399	Pocillopora_meandrina_HIv1___Sc0000003	9768332	9768759	428	145	49	0.013793103448275862	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	51	2	143	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9777958-9778366	Cluster_1400	Pocillopora_meandrina_HIv1___Sc0000003	9777958	9778366	409	92	47	0.15217391304347827	-	GUACACAAUAUUGGCCAAGAUUCUGAAA	13	6	74	3	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9784037-9784458	Cluster_1401	Pocillopora_meandrina_HIv1___Sc0000003	9784037	9784458	422	78	23	0.9615384615384616	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	43	0	75	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9784980-9785407	Cluster_1402	Pocillopora_meandrina_HIv1___Sc0000003	9784980	9785407	428	115	25	0.991304347826087	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	1	113	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9795699-9796507	Cluster_1403	Pocillopora_meandrina_HIv1___Sc0000003	9795699	9796507	809	14468	853	0.0013823610727121925	-	UCGAAGACUCUAGACGGCGGAAGCCUCUUU	2285	55	14302	18	25	22	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9799378-9799803	Cluster_1404	Pocillopora_meandrina_HIv1___Sc0000003	9799378	9799803	426	141	74	0.9645390070921985	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	21	3	134	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9800890-9801303	Cluster_1405	Pocillopora_meandrina_HIv1___Sc0000003	9800890	9801303	414	124	80	0.8145161290322581	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	15	4	103	1	2	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9802651-9803059	Cluster_1406	Pocillopora_meandrina_HIv1___Sc0000003	9802651	9803059	409	135	81	0.8518518518518519	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	9	2	124	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9807539-9807963	Cluster_1407	Pocillopora_meandrina_HIv1___Sc0000003	9807539	9807963	425	108	47	0.0	-	UUGUGCUGUUCUGUUUCUGCCAAUAGC	20	2	103	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9810528-9811420	Cluster_1408	Pocillopora_meandrina_HIv1___Sc0000003	9810528	9811420	893	53015	1323	9.431293030274451e-05	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	14658	34	52836	12	31	14	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9829639-9830063	Cluster_1409	Pocillopora_meandrina_HIv1___Sc0000003	9829639	9830063	425	137	62	0.021897810218978103	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	36	1	134	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9840509-9840938	Cluster_1410	Pocillopora_meandrina_HIv1___Sc0000003	9840509	9840938	430	140	37	0.95	+	UGUGUACUUUUGGUAGGUGGUAAUCAAAGU	82	0	138	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9842982-9843408	Cluster_1411	Pocillopora_meandrina_HIv1___Sc0000003	9842982	9843408	427	120	39	0.0	-	UUGGAAUUCGAAGCAAGUAACAACCGACA	17	0	119	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9846538-9846953	Cluster_1412	Pocillopora_meandrina_HIv1___Sc0000003	9846538	9846953	416	222	67	0.9684684684684685	+	UGUAUCCCAACCAAGU	128	133	83	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9872204-9872999	Cluster_1413	Pocillopora_meandrina_HIv1___Sc0000003	9872204	9872999	796	1867	364	0.0021424745581146223	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	329	4	1861	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9891466-9891893	Cluster_1414	Pocillopora_meandrina_HIv1___Sc0000003	9891466	9891893	428	130	51	0.03076923076923077	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	39	4	125	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9902335-9902764	Cluster_1415	Pocillopora_meandrina_HIv1___Sc0000003	9902335	9902764	430	128	34	0.9296875	+	UGUGUACUUUUGGUAGGUGGUAAUCAAAGU	75	0	125	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9904807-9905235	Cluster_1416	Pocillopora_meandrina_HIv1___Sc0000003	9904807	9905235	429	108	33	0.009259259259259259	-	UUGGAAUUCGAAGCAAGUAACAACCGACA	21	0	107	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9912132-9912541	Cluster_1417	Pocillopora_meandrina_HIv1___Sc0000003	9912132	9912541	410	78	30	0.9102564102564102	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	44	0	75	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9920702-9921127	Cluster_1418	Pocillopora_meandrina_HIv1___Sc0000003	9920702	9921127	426	113	25	0.04424778761061947	-	CGCUACAACAAGAUGUGAGUACUGUG	35	1	109	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9932440-9933237	Cluster_1419	Pocillopora_meandrina_HIv1___Sc0000003	9932440	9933237	798	2991	429	0.00033433634236041456	-	UCGAAGACUCUAAACGGCGGAAGCCUAUU	624	4	2981	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9935605-9936183	Cluster_1420	Pocillopora_meandrina_HIv1___Sc0000003	9935605	9936183	579	694	284	0.723342939481268	.	UGGAAAGUUGUAAAAUUAAGGCUGUACGG	32	8	620	4	4	15	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9944352-9944779	Cluster_1421	Pocillopora_meandrina_HIv1___Sc0000003	9944352	9944779	428	145	41	0.020689655172413793	-	UUAUUUCUACAUAGAGGGAGCUCACAUU	54	1	144	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9987992-9988419	Cluster_1422	Pocillopora_meandrina_HIv1___Sc0000003	9987992	9988419	428	283	57	0.8904593639575972	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	112	5	271	4	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:9994430-9994854	Cluster_1423	Pocillopora_meandrina_HIv1___Sc0000003	9994430	9994854	425	84	24	0.9166666666666666	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	47	0	79	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10001373-10002717	Cluster_1424	Pocillopora_meandrina_HIv1___Sc0000003	10001373	10002717	1345	37977	2320	0.0008689469942333518	-	UGAGCGUACGGUUUAAUGUGUUGAUGACGU	4257	168	37444	49	118	92	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10010816-10011245	Cluster_1425	Pocillopora_meandrina_HIv1___Sc0000003	10010816	10011245	430	920	154	0.0	-	UACAUGUCUCGGGGUAGCCGAUCUCGGA	241	14	903	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10011390-10011898	Cluster_1426	Pocillopora_meandrina_HIv1___Sc0000003	10011390	10011898	509	7545	534	0.0007952286282306163	-	UGUAUCGAUGUAAUCUCUCCAGUUUGUGUU	1531	68	7410	6	7	11	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10012444-10012874	Cluster_1427	Pocillopora_meandrina_HIv1___Sc0000003	10012444	10012874	431	282	94	0.014184397163120567	-	UUUAUCGUCAUUUGUGCUGAAAAUGGACA	34	6	274	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10014241-10014659	Cluster_1428	Pocillopora_meandrina_HIv1___Sc0000003	10014241	10014659	419	125	63	0.712	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	18	2	110	2	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10064345-10065144	Cluster_1429	Pocillopora_meandrina_HIv1___Sc0000003	10064345	10065144	800	2403	271	0.9492301290054099	+	UCGAAGACUCUAGACGGCGGAAGCCUCUUC	788	41	2272	13	3	12	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10079764-10080571	Cluster_1430	Pocillopora_meandrina_HIv1___Sc0000003	10079764	10080571	808	39934	646	0.9979716532278259	+	UGGAACAACCUUUCGACUGACGAUCUCACC	17034	70	39722	22	44	41	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10095243-10095670	Cluster_1431	Pocillopora_meandrina_HIv1___Sc0000003	10095243	10095670	428	137	57	0.10218978102189781	-	UGAGUGAGAUAAAUGAAUACCUUUGGAGA	16	3	132	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10129514-10129606	Cluster_1432	Pocillopora_meandrina_HIv1___Sc0000003	10129514	10129606	93	11154	258	0.00017930787161556393	-	CGAUGUACUUCAGAGCAAUUUUU	2791	469	115	3694	247	4906	1723	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000003:10254529-10255238	Cluster_1433	Pocillopora_meandrina_HIv1___Sc0000003	10254529	10255238	710	662	336	0.6737160120845922	.	UGAGAUACUUUGCUCGCUUGCGUAAUU	20	35	539	8	13	33	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10257232-10258201	Cluster_1434	Pocillopora_meandrina_HIv1___Sc0000003	10257232	10258201	970	3096	650	0.24709302325581395	.	CGUGUACGACGCCUCUGCCCGAGCUUCAGA	875	31	2960	18	18	29	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10258826-10259454	Cluster_1435	Pocillopora_meandrina_HIv1___Sc0000003	10258826	10259454	629	417	190	0.539568345323741	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	54	7	388	4	1	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10343590-10344134	Cluster_1436	Pocillopora_meandrina_HIv1___Sc0000003	10343590	10344134	545	479	104	0.9958246346555324	+	GCUUUGCAUGGAACAAUG	172	318	135	7	11	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10366033-10366130	Cluster_1437	Pocillopora_meandrina_HIv1___Sc0000003	10366033	10366130	98	846352	738	0.9999113843885287	+	ACCCGUAGAUCCGAACUUGU	295310	449529	33	21348	371685	3560	197	N	Y	hsa-miR-100-5p;mmu-miR-100-5p;rno-miR-100-5p;gga-miR-100-5p;aga-miR-100;dre-miR-100-5p;ggo-miR-100;age-miR-100;ppa-miR-100;ppy-miR-100;ptr-miR-100;mml-miR-100-5p;sla-miR-100;lla-miR-100;fru-miR-100;tni-miR-100;xtr-miR-100;mdo-miR-100-5p;ame-miR-100-5p;oan-miR-100-5p;tca-miR-100-5p;bta-miR-100;lgi-miR-100;sko-miR-100;bmo-miR-100;eca-miR-100;ssc-miR-100;bma-miR-100b;aae-miR-100;cqu-miR-100-5p;tgu-miR-100-5p;nvi-miR-100;pma-miR-100a-5p;aca-miR-100;ola-miR-100;sha-miR-100;cgr-miR-100-5p;mse-miR-100;ccr-miR-100;ipu-miR-100;pmi-miR-100-5p;bbe-miR-100-5p;ssa-miR-100a-5p;cpi-miR-100-5p;ami-miR-100-5p;cli-miR-100-5p;pbv-miR-100-5p;chi-miR-100-5p;tch-miR-100-5p;pal-miR-100-5p;tcf-miR-100;abu-miR-100;mze-miR-100;nbr-miR-100;oni-miR-100;pny-miR-100;gmo-miR-100a-5p;pte-miR-100b-5p;xla-miR-100-5p;cpo-miR-100-5p;dno-miR-100-5p;ocu-miR-100-5p;mmr-miR-100;dma-miR-100;cja-miR-100;pha-miR-100;sbo-miR-100;nle-miR-100;oga-miR-100;dqu-miR-100-5p;pca-miR-100-5p
Pocillopora_meandrina_HIv1___Sc0000003:10467440-10467869	Cluster_1438	Pocillopora_meandrina_HIv1___Sc0000003	10467440	10467869	430	139	39	0.07913669064748201	-	UUACAACGGGGACUAGCUCCGAUCUCUCUU	21	10	129	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10524991-10525416	Cluster_1439	Pocillopora_meandrina_HIv1___Sc0000003	10524991	10525416	426	100	35	0.02	-	UGUGUAGAUAUGUCUUUUGGACAGGA	33	1	97	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10659509-10659936	Cluster_1440	Pocillopora_meandrina_HIv1___Sc0000003	10659509	10659936	428	185	78	0.9459459459459459	+	UCAACAUUCUUAAUGUCACAUGGCACUCUUC	20	3	171	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10771888-10772321	Cluster_1441	Pocillopora_meandrina_HIv1___Sc0000003	10771888	10772321	434	438	170	0.8515981735159818	+	UAUCACUUCAUAUUCGGAUAUCCAUUGC	42	15	374	4	5	11	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10853901-10854327	Cluster_1442	Pocillopora_meandrina_HIv1___Sc0000003	10853901	10854327	427	212	104	0.4056603773584906	.	AAGUUUUCCAACGACUCGUUUCUCUGCG	35	6	191	3	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10886095-10886509	Cluster_1443	Pocillopora_meandrina_HIv1___Sc0000003	10886095	10886509	415	109	20	0.9724770642201835	+	AGUGUGCUCUUAAAU	54	108	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10898403-10898826	Cluster_1444	Pocillopora_meandrina_HIv1___Sc0000003	10898403	10898826	424	96	28	1.0	+	UGAGAUGGAUUUGAAUGACUGUAAGGUUUAC	19	5	74	2	8	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:10984913-10985340	Cluster_1445	Pocillopora_meandrina_HIv1___Sc0000003	10984913	10985340	428	166	85	0.10843373493975904	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	21	2	161	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11272564-11273266	Cluster_1446	Pocillopora_meandrina_HIv1___Sc0000003	11272564	11273266	703	459	202	0.9869281045751634	+	UAGGCACUCUUCUGUUUCCAGGUUUGGUA	55	15	427	6	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11273554-11274020	Cluster_1447	Pocillopora_meandrina_HIv1___Sc0000003	11273554	11274020	467	447	161	0.9865771812080537	+	UGCGACUCCGAGCACUUUCUGCACAAGUU	63	12	422	0	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11275061-11275491	Cluster_1448	Pocillopora_meandrina_HIv1___Sc0000003	11275061	11275491	431	2617	204	0.9973251815055407	+	UCGUAGACUUCCGUCCUUAUUGUUUGGUA	1114	10	2560	2	13	8	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11276324-11276785	Cluster_1449	Pocillopora_meandrina_HIv1___Sc0000003	11276324	11276785	462	431	110	0.9976798143851509	+	UGUACAUUGAAGCGCAGUUGUUUGUAGAACA	75	9	415	3	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11282947-11283364	Cluster_1450	Pocillopora_meandrina_HIv1___Sc0000003	11282947	11283364	418	251	31	0.9960159362549801	+	AUCCCACUCCUGACACCG	110	242	8	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11284625-11285047	Cluster_1451	Pocillopora_meandrina_HIv1___Sc0000003	11284625	11285047	423	107	46	0.9906542056074766	+	UUGGUAGACACUGCACAGUGGAUCUGGC	36	4	98	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11288132-11288614	Cluster_1452	Pocillopora_meandrina_HIv1___Sc0000003	11288132	11288614	483	554	189	1.0	+	UAAACAUCUUCUGUCUGAUAGCAAACGGC	61	12	539	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11289719-11290158	Cluster_1453	Pocillopora_meandrina_HIv1___Sc0000003	11289719	11290158	440	204	30	0.37254901960784315	.	UACCGUAGAACUUUCCAGAACAUUUCAUU	95	0	195	0	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11295745-11296301	Cluster_1454	Pocillopora_meandrina_HIv1___Sc0000003	11295745	11296301	557	3052	519	0.9495412844036697	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	526	21	2851	3	74	55	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11296950-11298687	Cluster_1455	Pocillopora_meandrina_HIv1___Sc0000003	11296950	11298687	1738	3812	1336	0.9598635886673662	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	101	33	3610	9	30	50	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11304922-11305468	Cluster_1456	Pocillopora_meandrina_HIv1___Sc0000003	11304922	11305468	547	5818	480	0.9529047782743211	+	UGAAAUCUUCUUGCUCUUUGUAAUCUGA	2822	117	5507	36	25	74	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11310298-11312559	Cluster_1457	Pocillopora_meandrina_HIv1___Sc0000003	11310298	11312559	2262	6836	2203	0.8983323581041545	+	UAUGUACGAUUUUAACUGGAAGAAACGUU	188	150	6366	25	41	86	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11313832-11314259	Cluster_1458	Pocillopora_meandrina_HIv1___Sc0000003	11313832	11314259	428	116	32	0.9396551724137931	+	UGAAAUUCCGAAUAAGUUCUCCAAAACC	39	7	104	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11321069-11322166	Cluster_1459	Pocillopora_meandrina_HIv1___Sc0000003	11321069	11322166	1098	5930	753	0.9637436762225969	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1473	39	5679	16	37	80	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11335082-11335508	Cluster_1460	Pocillopora_meandrina_HIv1___Sc0000003	11335082	11335508	427	271	127	0.8450184501845018	+	UGAUUCAUCAGUAUUAAUGACUGUAGU	53	11	234	2	1	5	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11335681-11336086	Cluster_1461	Pocillopora_meandrina_HIv1___Sc0000003	11335681	11336086	406	295	197	0.6474576271186441	.	UGACUAAACUGUGCUCGUGGAAUGUAUG	12	4	250	7	9	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11337091-11337595	Cluster_1462	Pocillopora_meandrina_HIv1___Sc0000003	11337091	11337595	505	401	193	0.6359102244389028	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	68	8	353	4	0	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11345275-11345703	Cluster_1463	Pocillopora_meandrina_HIv1___Sc0000003	11345275	11345703	429	232	54	0.9913793103448276	+	UACUAAGGAUCUUGAUCUCUUGUUUGAAG	77	4	224	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11346922-11347354	Cluster_1464	Pocillopora_meandrina_HIv1___Sc0000003	11346922	11347354	433	2375	184	0.999578947368421	+	UGAAAGACUCCUACAAAACUCCUUUUUGC	790	23	2321	0	9	6	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11353870-11354297	Cluster_1465	Pocillopora_meandrina_HIv1___Sc0000003	11353870	11354297	428	205	98	0.9902439024390244	+	UGAUCAUGUCGUUGCUGAAUUGAGGGCAU	22	3	201	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11358732-11359162	Cluster_1466	Pocillopora_meandrina_HIv1___Sc0000003	11358732	11359162	431	218	74	0.9908256880733946	+	UGACCGACUUCAUAAAGACUGACCAAGAGGA	30	5	204	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11363153-11363581	Cluster_1467	Pocillopora_meandrina_HIv1___Sc0000003	11363153	11363581	429	504	160	0.9702380952380952	+	UAUGAGCAAUAUCCCGAUGAGAAAUUUCG	67	29	439	3	8	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11363737-11364794	Cluster_1468	Pocillopora_meandrina_HIv1___Sc0000003	11363737	11364794	1058	15675	1256	0.998341307814992	+	UAUAGCAGAAAAUGAUGAACCAUAAA	1681	306	14854	79	92	169	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11365014-11366394	Cluster_1469	Pocillopora_meandrina_HIv1___Sc0000003	11365014	11366394	1381	3694	703	0.9935029778018408	+	UGCAGACUUUGCUUAGGGGUUCAACAUC	935	63	3447	7	60	93	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11378928-11380102	Cluster_1470	Pocillopora_meandrina_HIv1___Sc0000003	11378928	11380102	1175	904	349	0.9513274336283186	+	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	98	10	837	0	12	9	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11380313-11380819	Cluster_1471	Pocillopora_meandrina_HIv1___Sc0000003	11380313	11380819	507	703	285	0.9217638691322901	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	56	7	661	2	3	10	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11380835-11381361	Cluster_1472	Pocillopora_meandrina_HIv1___Sc0000003	11380835	11381361	527	555	229	0.8792792792792793	+	UGAACUUCUCGGCUCCAAACACUAUGG	114	5	506	6	2	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11381379-11381806	Cluster_1473	Pocillopora_meandrina_HIv1___Sc0000003	11381379	11381806	428	371	173	0.8733153638814016	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	55	2	349	1	1	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11381813-11382240	Cluster_1474	Pocillopora_meandrina_HIv1___Sc0000003	11381813	11382240	428	259	129	0.915057915057915	+	UGAUAACACCAAGUUCUUCGAGACGAGU	30	1	247	1	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11385945-11386361	Cluster_1475	Pocillopora_meandrina_HIv1___Sc0000003	11385945	11386361	417	120	60	0.9	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	23	0	108	1	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11386437-11386980	Cluster_1476	Pocillopora_meandrina_HIv1___Sc0000003	11386437	11386980	544	433	208	0.8752886836027713	+	UGUAUCUUCUUAGGCCAGCAUGUGUACUGA	48	4	410	2	1	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11387132-11387560	Cluster_1477	Pocillopora_meandrina_HIv1___Sc0000003	11387132	11387560	429	206	100	0.9368932038834952	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	36	0	198	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11387865-11388471	Cluster_1478	Pocillopora_meandrina_HIv1___Sc0000003	11387865	11388471	607	1181	377	0.9449618966977138	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	143	16	1104	9	3	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11401628-11402661	Cluster_1479	Pocillopora_meandrina_HIv1___Sc0000003	11401628	11402661	1034	570	314	0.9105263157894737	+	UGAAUGAUGUUGUCGAGUAGAUUGAGAGU	21	13	536	3	3	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11403222-11403650	Cluster_1480	Pocillopora_meandrina_HIv1___Sc0000003	11403222	11403650	429	180	64	0.9777777777777777	+	UGUGUGGAUCUGUAAUGCAUCAUGCCGUC	42	7	172	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11404422-11404953	Cluster_1481	Pocillopora_meandrina_HIv1___Sc0000003	11404422	11404953	532	2012	397	0.6038767395626242	.	GUGUAGAUCAGCCGACUUCAACAUGUCA	182	35	1644	10	40	122	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11405603-11406230	Cluster_1482	Pocillopora_meandrina_HIv1___Sc0000003	11405603	11406230	628	484	168	0.96900826446281	+	UACUGAAUUUCUCGCACGCAAAUUGUGGG	105	6	460	2	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11406949-11408132	Cluster_1483	Pocillopora_meandrina_HIv1___Sc0000003	11406949	11408132	1184	1289	454	0.9146625290923196	+	AAUGCGGGUUCUGCA	348	403	820	5	14	26	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11415939-11417911	Cluster_1484	Pocillopora_meandrina_HIv1___Sc0000003	11415939	11417911	1973	5626	1533	0.9388553146107359	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	442	39	5353	16	28	69	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11418552-11419827	Cluster_1485	Pocillopora_meandrina_HIv1___Sc0000003	11418552	11419827	1276	1527	486	0.9462999345121152	+	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	136	8	1448	6	4	28	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11419882-11420308	Cluster_1486	Pocillopora_meandrina_HIv1___Sc0000003	11419882	11420308	427	154	71	0.9545454545454546	+	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	20	6	144	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11420788-11422512	Cluster_1487	Pocillopora_meandrina_HIv1___Sc0000003	11420788	11422512	1725	2225	809	0.7114606741573034	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	103	35	2041	8	8	39	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11422532-11423481	Cluster_1488	Pocillopora_meandrina_HIv1___Sc0000003	11422532	11423481	950	2106	693	0.09164292497625831	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	164	16	1978	5	12	23	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11423483-11424351	Cluster_1489	Pocillopora_meandrina_HIv1___Sc0000003	11423483	11424351	869	1084	545	0.13468634686346864	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	35	28	956	4	15	29	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11424552-11426547	Cluster_1490	Pocillopora_meandrina_HIv1___Sc0000003	11424552	11426547	1996	3500	1184	0.06342857142857143	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	212	25	3239	24	32	68	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11428422-11428852	Cluster_1491	Pocillopora_meandrina_HIv1___Sc0000003	11428422	11428852	431	951	104	0.982124079915878	+	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	523	10	921	0	0	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11430182-11430731	Cluster_1492	Pocillopora_meandrina_HIv1___Sc0000003	11430182	11430731	550	4237	604	0.40618362048619305	.	ACAAGACAGAAUUCCAGCUGAUACAGA	484	53	3896	8	40	108	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11430802-11431829	Cluster_1493	Pocillopora_meandrina_HIv1___Sc0000003	11430802	11431829	1028	4269	961	0.10798781916139612	-	UCUGCGACUAUGAAAUAAGGCUUCUGC	453	48	4000	15	24	58	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11432031-11432913	Cluster_1494	Pocillopora_meandrina_HIv1___Sc0000003	11432031	11432913	883	4628	767	0.1497407087294728	-	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	638	26	4400	38	10	54	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11433933-11435124	Cluster_1495	Pocillopora_meandrina_HIv1___Sc0000003	11433933	11435124	1192	2748	842	0.16885007278020378	-	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	115	48	2503	13	27	34	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11436258-11436994	Cluster_1496	Pocillopora_meandrina_HIv1___Sc0000003	11436258	11436994	737	3891	574	0.017733230531996914	-	UGGAAAAGGCUUGUUGGAAAUCUUCACG	761	10	3814	6	3	16	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11535301-11535725	Cluster_1497	Pocillopora_meandrina_HIv1___Sc0000003	11535301	11535725	425	92	25	1.0	+	GAGAUUCUCAAGAGGAUUGCACUGGAGA	33	5	84	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11639373-11639839	Cluster_1498	Pocillopora_meandrina_HIv1___Sc0000003	11639373	11639839	467	1235	173	0.46396761133603237	.	UUAACUCCACGGUGCCAAUGACUUUCUU	206	9	1055	10	6	57	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11689765-11690191	Cluster_1499	Pocillopora_meandrina_HIv1___Sc0000003	11689765	11690191	427	132	36	0.9924242424242424	+	UUAUAACCGAGUGUGCCUUAUAACCGA	49	3	127	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11710129-11710557	Cluster_1500	Pocillopora_meandrina_HIv1___Sc0000003	11710129	11710557	429	538	72	0.9721189591078067	+	UAACUUCAACUAGAUCAAAAUGCUCGUGA	329	10	519	3	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11727877-11728296	Cluster_1501	Pocillopora_meandrina_HIv1___Sc0000003	11727877	11728296	420	244	19	0.0	-	CACUUGAAGCGGUUGGAU	71	244	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:11894004-11894428	Cluster_1502	Pocillopora_meandrina_HIv1___Sc0000003	11894004	11894428	425	159	54	0.5157232704402516	.	UCUGACAUCCUUCUUUUAUACUUUGUGC	21	4	101	0	9	15	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12068300-12068733	Cluster_1503	Pocillopora_meandrina_HIv1___Sc0000003	12068300	12068733	434	351	120	0.9259259259259259	+	UAGACAAGAUCUUCAGUAAAAACCAAUUCU	38	33	300	6	5	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12280391-12280819	Cluster_1504	Pocillopora_meandrina_HIv1___Sc0000003	12280391	12280819	429	398	65	0.9824120603015075	+	GCUUGAUGUACGCGAAAGAAAUUGGAUGG	58	13	378	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12328977-12329394	Cluster_1505	Pocillopora_meandrina_HIv1___Sc0000003	12328977	12329394	418	117	67	0.9914529914529915	+	AACAGGUCGAAGGGUAGAGACA	21	38	25	9	28	15	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12332383-12332960	Cluster_1506	Pocillopora_meandrina_HIv1___Sc0000003	12332383	12332960	578	522	46	0.6206896551724138	.	GCAUUACCUGAUCUUUUGUACCUUAGGCU	130	7	508	1	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12356920-12357347	Cluster_1507	Pocillopora_meandrina_HIv1___Sc0000003	12356920	12357347	428	256	105	0.19921875	-	GUUCUUAUCAGCAGGAAUACCUCUGUCCA	45	12	219	0	0	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12463515-12464185	Cluster_1508	Pocillopora_meandrina_HIv1___Sc0000003	12463515	12464185	671	1600	284	0.52625	.	CGCUACUUUGACCUCAUU	124	706	864	7	6	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12466781-12467410	Cluster_1509	Pocillopora_meandrina_HIv1___Sc0000003	12466781	12467410	630	351	81	0.9658119658119658	+	UUUCAAACUAAGGAAGGAGAAAGGGAUA	117	3	266	2	4	3	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12564108-12564536	Cluster_1510	Pocillopora_meandrina_HIv1___Sc0000003	12564108	12564536	429	279	117	0.0035842293906810036	-	UCUCAGUGACUUGAGUUCUUCUUGUACGGA	23	3	270	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12565211-12565746	Cluster_1511	Pocillopora_meandrina_HIv1___Sc0000003	12565211	12565746	536	389	162	0.010282776349614395	-	UGUGUAACUGCUGCUGGCGUCCAAGCCGU	23	3	373	6	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12586091-12586519	Cluster_1512	Pocillopora_meandrina_HIv1___Sc0000003	12586091	12586519	429	298	155	0.08053691275167785	-	UUUCCAAAUACCGUCCUGAAAAAUUCAGU	11	18	259	6	4	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12639739-12640148	Cluster_1513	Pocillopora_meandrina_HIv1___Sc0000003	12639739	12640148	410	108	48	0.6666666666666666	.	UGUAACUGUAACAAU	14	15	85	3	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12711305-12711721	Cluster_1514	Pocillopora_meandrina_HIv1___Sc0000003	12711305	12711721	417	14087	58	0.0	-	AGUGUGCUCUUAACA	10824	14081	1	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12928765-12930446	Cluster_1515	Pocillopora_meandrina_HIv1___Sc0000003	12928765	12930446	1682	1935	791	0.18708010335917313	-	UCUAACGCGUUUGUCUGACAUCCCUUU	142	44	1709	18	47	23	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:12931370-12932835	Cluster_1516	Pocillopora_meandrina_HIv1___Sc0000003	12931370	12932835	1466	16770	2259	0.9013118664281455	+	UCGUUCUUUUUCAUACUUCUGAAGCAUU	3075	283	14901	184	87	199	1116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13055954-13056371	Cluster_1517	Pocillopora_meandrina_HIv1___Sc0000003	13055954	13056371	418	193	77	0.0051813471502590676	-	GAGAGAGCUCAGAUGUGU	52	143	22	10	5	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13330512-13331271	Cluster_1518	Pocillopora_meandrina_HIv1___Sc0000003	13330512	13331271	760	295	128	0.9355932203389831	+	UAGACAUGACAUCAGCCUCUGAGCCAACUC	28	4	276	3	4	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13331910-13332597	Cluster_1519	Pocillopora_meandrina_HIv1___Sc0000003	13331910	13332597	688	3634	475	0.023665382498624106	-	UGUAAUCCACAUGAUCAGUCCAAGACAGAUU	357	155	3383	4	10	8	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13340424-13340829	Cluster_1520	Pocillopora_meandrina_HIv1___Sc0000003	13340424	13340829	406	85	36	1.0	+	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	18	0	81	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13396302-13397582	Cluster_1521	Pocillopora_meandrina_HIv1___Sc0000003	13396302	13397582	1281	2756	986	0.2021044992743106	.	UAGAAGGAUUUGAAAAUGUCAGGCAUGU	202	58	2549	20	18	29	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13398157-13398567	Cluster_1522	Pocillopora_meandrina_HIv1___Sc0000003	13398157	13398567	411	163	100	0.8773006134969326	+	UACUUGACUCUAGGAUACACAAGUUCUGG	25	0	149	1	4	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13398708-13399926	Cluster_1523	Pocillopora_meandrina_HIv1___Sc0000003	13398708	13399926	1219	3147	1103	0.669208770257388	.	AGGUGUAGAAUGUAAAAAGCAGCU	147	35	2680	22	25	78	307	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13490963-13491384	Cluster_1524	Pocillopora_meandrina_HIv1___Sc0000003	13490963	13491384	422	112	35	0.9464285714285714	+	UGUAUCUUCAGAGGACUUCAGGUCGCUCA	39	2	98	4	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13511110-13511532	Cluster_1525	Pocillopora_meandrina_HIv1___Sc0000003	13511110	13511532	423	111	44	0.963963963963964	+	UUUCUUCAGAUUCGAAAAGCUUUCUUC	38	0	105	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13577508-13578577	Cluster_1526	Pocillopora_meandrina_HIv1___Sc0000003	13577508	13578577	1070	1443	541	0.8309078309078309	+	UUAUGCGUAGAGCACUUCCCGUUACCGUGA	40	45	1311	8	10	11	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13610033-13610462	Cluster_1527	Pocillopora_meandrina_HIv1___Sc0000003	13610033	13610462	430	146	37	0.8767123287671232	+	AUCUAAACGAACUUGUUUUUCUUAUGAACA	43	6	135	0	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13659589-13660016	Cluster_1528	Pocillopora_meandrina_HIv1___Sc0000003	13659589	13660016	428	171	61	0.9766081871345029	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	50	1	162	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13680820-13681237	Cluster_1529	Pocillopora_meandrina_HIv1___Sc0000003	13680820	13681237	418	216	149	0.37037037037037035	.	UUUGUGCGGACCUUUGUGAG	9	130	15	43	15	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13841495-13841922	Cluster_1530	Pocillopora_meandrina_HIv1___Sc0000003	13841495	13841922	428	81	15	0.06172839506172839	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	33	1	79	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13864481-13864908	Cluster_1531	Pocillopora_meandrina_HIv1___Sc0000003	13864481	13864908	428	138	41	0.9347826086956522	+	UAGGAUAUAUCACUUGCGUAAUUUACA	26	5	127	1	4	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13891543-13891952	Cluster_1532	Pocillopora_meandrina_HIv1___Sc0000003	13891543	13891952	410	142	58	0.5140845070422535	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	16	4	127	0	1	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13907614-13908040	Cluster_1533	Pocillopora_meandrina_HIv1___Sc0000003	13907614	13908040	427	158	45	0.0379746835443038	-	UCGUUUAGAUCAGAGAUCACCUCAACU	33	1	155	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13952701-13954231	Cluster_1534	Pocillopora_meandrina_HIv1___Sc0000003	13952701	13954231	1531	1522	640	0.9638633377135348	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	91	19	1445	3	10	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13954671-13955199	Cluster_1535	Pocillopora_meandrina_HIv1___Sc0000003	13954671	13955199	529	594	243	0.9158249158249159	+	UGUUAAAAUUAAAAUCUGCCAGUUCUGC	130	12	528	7	2	13	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13955885-13956923	Cluster_1536	Pocillopora_meandrina_HIv1___Sc0000003	13955885	13956923	1039	796	364	0.9547738693467337	+	UAACAUCUCUCUUUCCGACUUUAACAGC	48	8	765	1	3	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13957064-13958670	Cluster_1537	Pocillopora_meandrina_HIv1___Sc0000003	13957064	13958670	1607	1607	739	0.8855009334163036	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	76	16	1459	7	15	22	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:13990007-13990433	Cluster_1538	Pocillopora_meandrina_HIv1___Sc0000003	13990007	13990433	427	95	31	0.9578947368421052	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	41	7	80	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14079943-14080481	Cluster_1539	Pocillopora_meandrina_HIv1___Sc0000003	14079943	14080481	539	950	426	0.0431578947368421	-	UCCGUUUCGAGGUAUUUAUUUAGAGCUC	29	22	868	5	5	17	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14080569-14081562	Cluster_1540	Pocillopora_meandrina_HIv1___Sc0000003	14080569	14081562	994	1168	473	0.0702054794520548	-	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	101	11	1090	10	4	14	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14081703-14082741	Cluster_1541	Pocillopora_meandrina_HIv1___Sc0000003	14081703	14082741	1039	831	378	0.04693140794223827	-	UAACAUCUCUCUUUCCGACUUUAACAGC	54	7	781	5	8	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14083663-14084097	Cluster_1542	Pocillopora_meandrina_HIv1___Sc0000003	14083663	14084097	435	644	276	0.09316770186335403	-	UGAUGGAUCACUGCUUGACUUGUUGCA	51	24	542	10	9	15	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14084349-14084797	Cluster_1543	Pocillopora_meandrina_HIv1___Sc0000003	14084349	14084797	449	394	200	0.12436548223350254	-	UGGGAAUCCGAAUCGUGGUACAAAGUCA	26	32	320	18	7	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14084832-14085920	Cluster_1544	Pocillopora_meandrina_HIv1___Sc0000003	14084832	14085920	1089	3396	773	0.010011778563015312	-	UUAACGCGUGAACUGCUGAAUACUGGC	239	20	3278	9	13	34	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14157467-14157881	Cluster_1545	Pocillopora_meandrina_HIv1___Sc0000003	14157467	14157881	415	101	7	1.0	+	GAAUCGGCCGUGGGC	84	101	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14165185-14165662	Cluster_1546	Pocillopora_meandrina_HIv1___Sc0000003	14165185	14165662	478	324	107	0.006172839506172839	-	UCGUUCAUUUACAAGAUUUGCCGCUUCGC	63	3	318	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14220817-14221247	Cluster_1547	Pocillopora_meandrina_HIv1___Sc0000003	14220817	14221247	431	315	50	0.9873015873015873	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	75	6	303	2	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14221275-14221702	Cluster_1548	Pocillopora_meandrina_HIv1___Sc0000003	14221275	14221702	428	265	59	0.9886792452830189	+	UUGGAACGUGUUGCUGAACGCUUGUUGC	74	0	257	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14259991-14260406	Cluster_1549	Pocillopora_meandrina_HIv1___Sc0000003	14259991	14260406	416	88	41	0.0	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUUG	13	1	82	3	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14274955-14275375	Cluster_1550	Pocillopora_meandrina_HIv1___Sc0000003	14274955	14275375	421	373	131	0.2520107238605898	.	UUCGCGUCUGAAGCUGUUAG	77	207	32	33	60	34	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14363055-14363483	Cluster_1551	Pocillopora_meandrina_HIv1___Sc0000003	14363055	14363483	429	421	38	0.997624703087886	+	UGAAAGACUCCAAUAAAACUCCUCUUU	163	32	349	5	7	21	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14394530-14394954	Cluster_1552	Pocillopora_meandrina_HIv1___Sc0000003	14394530	14394954	425	194	61	0.08247422680412371	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	26	1	191	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14400478-14400896	Cluster_1553	Pocillopora_meandrina_HIv1___Sc0000003	14400478	14400896	419	147	68	0.20408163265306123	.	UCGACACGUUCCUUGUUUACAUAAAGGC	9	1	135	0	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14417208-14417844	Cluster_1554	Pocillopora_meandrina_HIv1___Sc0000003	14417208	14417844	637	954	137	0.9989517819706499	+	UUGGAACGUGUUGCUGAACGCUUGUUA	295	17	912	3	2	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14422810-14423791	Cluster_1555	Pocillopora_meandrina_HIv1___Sc0000003	14422810	14423791	982	1975	361	0.979746835443038	+	UAAGCAAUCAACUCCAACAAACUCGUC	551	26	1867	55	4	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14456836-14457261	Cluster_1556	Pocillopora_meandrina_HIv1___Sc0000003	14456836	14457261	426	429	54	0.9790209790209791	+	UAAGACAUUGGCAUACUUGGCAUACA	288	3	407	2	4	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14530563-14530993	Cluster_1557	Pocillopora_meandrina_HIv1___Sc0000003	14530563	14530993	431	261	77	0.9846743295019157	+	UGUAUCUUCGCGUGUCUCUGUGGAUGACU	26	3	256	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14540688-14541196	Cluster_1558	Pocillopora_meandrina_HIv1___Sc0000003	14540688	14541196	509	783	181	0.01532567049808429	-	UGGAACGUGUUGCUGAACGCUUGUUGUA	160	15	746	2	8	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14577884-14578311	Cluster_1559	Pocillopora_meandrina_HIv1___Sc0000003	14577884	14578311	428	97	29	0.0	-	UUGGUUCUACGGCAUGAGUGAUGACUGU	31	1	96	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14586087-14586514	Cluster_1560	Pocillopora_meandrina_HIv1___Sc0000003	14586087	14586514	428	229	105	0.9039301310043668	+	UGUUAAAUUGGUAGCUGUACAUUUCGAAGC	30	2	209	0	4	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14666900-14667362	Cluster_1561	Pocillopora_meandrina_HIv1___Sc0000003	14666900	14667362	463	411	173	0.8832116788321168	+	UGUUUUCUUUGAUCCGCAGACGUGACAC	38	10	370	4	3	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14667551-14668885	Cluster_1562	Pocillopora_meandrina_HIv1___Sc0000003	14667551	14668885	1335	1503	496	0.5801729873586161	.	GGGUUUCGUAUCUUGGACAUGUGGUCACA	147	19	1203	13	41	150	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14670104-14670513	Cluster_1563	Pocillopora_meandrina_HIv1___Sc0000003	14670104	14670513	410	169	104	0.5502958579881657	.	UGAAUUUGCUGAACUAAUUCCUGGAGAGC	6	5	134	5	1	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14733119-14733547	Cluster_1564	Pocillopora_meandrina_HIv1___Sc0000003	14733119	14733547	429	623	70	0.9919743178170144	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	293	8	603	3	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14745340-14746974	Cluster_1565	Pocillopora_meandrina_HIv1___Sc0000003	14745340	14746974	1635	4055	992	0.10579531442663379	-	UUCUUAACGUAGCGCUCUCUGACUUUCC	251	41	3848	20	8	62	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14748358-14748780	Cluster_1566	Pocillopora_meandrina_HIv1___Sc0000003	14748358	14748780	423	385	62	0.005194805194805195	-	AAAGAAGUACAAGUGGUAGGGUC	223	14	42	20	81	225	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14754052-14754691	Cluster_1567	Pocillopora_meandrina_HIv1___Sc0000003	14754052	14754691	640	285	143	0.6491228070175439	.	UAAACUCCACAGUCAUCGGAAUUGUUCUGG	37	3	243	4	4	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14755390-14755813	Cluster_1568	Pocillopora_meandrina_HIv1___Sc0000003	14755390	14755813	424	142	73	0.9436619718309859	+	UAUUUUCAAACUGCGACGAUUGCUUCUGA	19	2	132	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14760292-14760713	Cluster_1569	Pocillopora_meandrina_HIv1___Sc0000003	14760292	14760713	422	209	118	0.023923444976076555	-	UGAUAUUCCGAUGUUAUUGAACGCAUU	9	3	198	5	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14763327-14763755	Cluster_1570	Pocillopora_meandrina_HIv1___Sc0000003	14763327	14763755	429	285	51	0.8807017543859649	+	AAGGAAUUCAUGACACACAGCAUCAGACG	55	4	231	5	0	4	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14764345-14764773	Cluster_1571	Pocillopora_meandrina_HIv1___Sc0000003	14764345	14764773	429	136	27	0.051470588235294115	-	UAUGAUCAAAUACUGGAUUUCCAUCAUGC	98	0	133	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14792339-14793038	Cluster_1572	Pocillopora_meandrina_HIv1___Sc0000003	14792339	14793038	700	938	353	0.31343283582089554	.	UGUUUUCUUUGUGUUCAACGUUGCUCGAUC	92	16	866	6	4	18	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14869035-14869461	Cluster_1573	Pocillopora_meandrina_HIv1___Sc0000003	14869035	14869461	427	236	23	1.0	+	UGUUGUGGUUUAGGCAUUCUGUAUCUCA	68	2	225	2	2	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14949573-14950172	Cluster_1574	Pocillopora_meandrina_HIv1___Sc0000003	14949573	14950172	600	1403	197	0.9672131147540983	+	GAUUGGAACAGUCAUCAGACGGGUGGACA	402	14	1328	7	26	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:14950325-14950752	Cluster_1575	Pocillopora_meandrina_HIv1___Sc0000003	14950325	14950752	428	153	62	0.0784313725490196	-	UAUAACGGUUAAUGUUGACGUCUAAACG	32	6	136	2	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15015709-15016123	Cluster_1576	Pocillopora_meandrina_HIv1___Sc0000003	15015709	15016123	415	241	15	0.0	-	GCUAACCUGCCGUCA	188	241	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15082631-15083047	Cluster_1577	Pocillopora_meandrina_HIv1___Sc0000003	15082631	15083047	417	198	9	1.0	+	UGUGCUGGAAUUCACUA	149	198	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15124800-15125215	Cluster_1578	Pocillopora_meandrina_HIv1___Sc0000003	15124800	15125215	416	1144	32	0.0	-	CAUUGCACUUCGACUA	885	1144	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15161970-15162397	Cluster_1579	Pocillopora_meandrina_HIv1___Sc0000003	15161970	15162397	428	216	106	0.1111111111111111	-	UGUUUUGAUCUUAGCGUACUCGUUUGUU	27	2	199	2	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15162906-15163308	Cluster_1580	Pocillopora_meandrina_HIv1___Sc0000003	15162906	15163308	403	126	63	0.03968253968253968	-	UGAAUUUCGUCCUUUUCUUUGUCCCAGG	27	2	118	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15172910-15173338	Cluster_1581	Pocillopora_meandrina_HIv1___Sc0000003	15172910	15173338	429	1323	51	1.0	+	UAACUUCAACUAGAUCGAAAUGCUUGUGA	989	1	1321	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15177574-15178003	Cluster_1582	Pocillopora_meandrina_HIv1___Sc0000003	15177574	15178003	430	389	145	0.9922879177377892	+	CAAGUGCUGCUUCUGCUACCUGGACAGAUU	45	8	373	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15183104-15183550	Cluster_1583	Pocillopora_meandrina_HIv1___Sc0000003	15183104	15183550	447	1402	178	0.927246790299572	+	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	587	6	1357	8	7	16	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15184558-15184986	Cluster_1584	Pocillopora_meandrina_HIv1___Sc0000003	15184558	15184986	429	127	46	0.007874015748031496	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	22	0	125	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15261067-15261502	Cluster_1585	Pocillopora_meandrina_HIv1___Sc0000003	15261067	15261502	436	192	64	0.265625	.	UGUUAAAUUACGAUGCUUCUAACAGUUCUGA	25	5	121	1	2	25	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15349508-15349936	Cluster_1586	Pocillopora_meandrina_HIv1___Sc0000003	15349508	15349936	429	1247	100	0.9967923015236567	+	GAUUGGAACAGUCAUCAGACGGGUGGACA	454	14	1213	0	6	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15354686-15355112	Cluster_1587	Pocillopora_meandrina_HIv1___Sc0000003	15354686	15355112	427	135	15	1.0	+	UGUUGUGGUUUAGGCAUUCUGUAUCUCC	48	2	132	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15371508-15371934	Cluster_1588	Pocillopora_meandrina_HIv1___Sc0000003	15371508	15371934	427	215	134	0.8511627906976744	+	UGAGUCGAGGUUAUUCACAAUACGAGC	25	11	179	3	5	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15391885-15392481	Cluster_1589	Pocillopora_meandrina_HIv1___Sc0000003	15391885	15392481	597	5577	514	0.9967724583109199	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	819	15	5511	4	8	10	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15400240-15400668	Cluster_1590	Pocillopora_meandrina_HIv1___Sc0000003	15400240	15400668	429	644	77	0.9953416149068323	+	UAUGAUUGCUUGAAAUUGUUAGACCA	401	9	634	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15406618-15407036	Cluster_1591	Pocillopora_meandrina_HIv1___Sc0000003	15406618	15407036	419	97	41	1.0	+	UACGAUGAACUCUUCUGCUAUUGUGGAGA	31	1	94	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15410924-15411542	Cluster_1592	Pocillopora_meandrina_HIv1___Sc0000003	15410924	15411542	619	792	271	0.9027777777777778	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	53	11	747	4	6	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15414332-15414760	Cluster_1593	Pocillopora_meandrina_HIv1___Sc0000003	15414332	15414760	429	154	68	1.0	+	UGUUAUUUGUUCUGGCGAUCUUUCAUCGA	30	6	146	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15416696-15417125	Cluster_1594	Pocillopora_meandrina_HIv1___Sc0000003	15416696	15417125	430	1172	108	0.9982935153583617	+	UUGGAUCCCGUAACUCUGGAAAGCUCAG	317	12	1153	2	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15417616-15418454	Cluster_1595	Pocillopora_meandrina_HIv1___Sc0000003	15417616	15418454	839	564	217	0.9485815602836879	+	UGUAAGUCUACAGUAGAUUUGGAGGUG	40	22	515	4	2	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15420028-15420442	Cluster_1596	Pocillopora_meandrina_HIv1___Sc0000003	15420028	15420442	415	123	12	0.04878048780487805	-	GUGGAAGGUAGGUCA	106	117	4	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15421409-15421836	Cluster_1597	Pocillopora_meandrina_HIv1___Sc0000003	15421409	15421836	428	168	83	0.9880952380952381	+	UUGGAUGACGUCUUCACUGACUUUGUGGUC	10	7	157	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15431985-15432412	Cluster_1598	Pocillopora_meandrina_HIv1___Sc0000003	15431985	15432412	428	116	22	0.9913793103448276	+	UGAAAUCUACAAACUUGAAAUACUCAGC	41	2	114	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15450947-15451676	Cluster_1599	Pocillopora_meandrina_HIv1___Sc0000003	15450947	15451676	730	4078	500	0.993379107405591	+	UAAGACAUUGGUAUACUUCGCAUGCAAGG	397	50	3906	8	27	64	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15452121-15452743	Cluster_1600	Pocillopora_meandrina_HIv1___Sc0000003	15452121	15452743	623	1080	243	0.9972222222222222	+	UUGACUCAACCACUUAACAAGAGCUAGACA	357	8	1050	1	5	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15453438-15454306	Cluster_1601	Pocillopora_meandrina_HIv1___Sc0000003	15453438	15454306	869	5148	545	0.9399766899766899	+	UAUGAUCUGGAUAUAUUGUACAUUUUC	852	31	4796	37	32	53	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15454828-15455243	Cluster_1602	Pocillopora_meandrina_HIv1___Sc0000003	15454828	15455243	416	231	79	0.9393939393939394	+	UGUAUCCCAACCAAGU	129	138	83	1	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15455863-15456299	Cluster_1603	Pocillopora_meandrina_HIv1___Sc0000003	15455863	15456299	437	3561	261	0.9842740803145184	+	UACUGCUCUUCAGUUUCUGUGUUUUCAGGC	1311	4	3523	2	1	6	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15471290-15471708	Cluster_1604	Pocillopora_meandrina_HIv1___Sc0000003	15471290	15471708	419	166	77	0.6987951807228916	.	UCUACUGUCUGCUCUAUCGUAAAUGAAGUC	13	8	154	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15477016-15477447	Cluster_1605	Pocillopora_meandrina_HIv1___Sc0000003	15477016	15477447	432	679	129	0.9705449189985272	+	UGUAAUCUCAAUGCUGGUGCUCUGGCAC	129	3	642	0	0	21	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15478463-15479039	Cluster_1606	Pocillopora_meandrina_HIv1___Sc0000003	15478463	15479039	577	4974	281	0.0671491757137113	-	CUGGAUUUCAAAAAGAACCUAA	3327	51	1076	119	3693	5	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15480587-15481046	Cluster_1607	Pocillopora_meandrina_HIv1___Sc0000003	15480587	15481046	460	438	206	0.4908675799086758	.	UCGGUGCCACAACUGACUGAAAUUUAAUUC	36	11	356	5	4	11	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15481085-15481494	Cluster_1608	Pocillopora_meandrina_HIv1___Sc0000003	15481085	15481494	410	334	139	0.5688622754491018	.	UACGAUCGUAGUUCCAGUACGGAAA	26	5	295	2	4	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15487197-15487656	Cluster_1609	Pocillopora_meandrina_HIv1___Sc0000003	15487197	15487656	460	953	234	0.23294858342077648	.	UGUGAGCGAAAACGACCGUGAAACGAACG	67	8	757	32	22	81	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15495968-15496395	Cluster_1610	Pocillopora_meandrina_HIv1___Sc0000003	15495968	15496395	428	136	34	0.029411764705882353	-	UUGACGUUCGCUCCAGAAAGCGUUGGAGA	56	35	90	8	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15497524-15498143	Cluster_1611	Pocillopora_meandrina_HIv1___Sc0000003	15497524	15498143	620	330	130	0.9696969696969697	+	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	55	0	324	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:15939760-15941463	Cluster_1612	Pocillopora_meandrina_HIv1___Sc0000003	15939760	15941463	1704	221234	2717	0.9999321984866703	+	GACUUGAAGCGGUUGGA	24812	187710	1479	18783	7997	3213	2052	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16071252-16072364	Cluster_1613	Pocillopora_meandrina_HIv1___Sc0000003	16071252	16072364	1113	49980	2143	0.999859943977591	+	GGUGGACUGCUUGCAGU	3328	31437	7023	1999	6071	2105	1345	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16161170-16161597	Cluster_1614	Pocillopora_meandrina_HIv1___Sc0000003	16161170	16161597	428	121	41	0.9752066115702479	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	1	119	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16162242-16162671	Cluster_1615	Pocillopora_meandrina_HIv1___Sc0000003	16162242	16162671	430	207	68	0.9565217391304348	+	UAAUGGGAAAACGAGAACAGCGUGAGUGU	36	1	194	1	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16173599-16174217	Cluster_1616	Pocillopora_meandrina_HIv1___Sc0000003	16173599	16174217	619	93766	3592	0.9992321310496342	+	UGAGAUUAAGCCUUUGUUCUAAGAUUUGU	19723	28825	50696	4457	2183	3544	4061	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16338462-16338888	Cluster_1617	Pocillopora_meandrina_HIv1___Sc0000003	16338462	16338888	427	194	109	0.11855670103092783	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	21	2	182	3	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16356578-16357005	Cluster_1618	Pocillopora_meandrina_HIv1___Sc0000003	16356578	16357005	428	225	133	0.7733333333333333	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	15	4	205	1	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16358524-16359354	Cluster_1619	Pocillopora_meandrina_HIv1___Sc0000003	16358524	16359354	831	551	228	0.050816696914700546	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	46	3	527	2	3	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16387251-16387673	Cluster_1620	Pocillopora_meandrina_HIv1___Sc0000003	16387251	16387673	423	196	85	0.8316326530612245	+	UGCUUCUUGAACUGGAUAGCGCUGAUGGU	17	34	153	3	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16620176-16620583	Cluster_1621	Pocillopora_meandrina_HIv1___Sc0000003	16620176	16620583	408	286	160	0.024475524475524476	-	UGUUCAGGGCGUCUAUCUCUUUGCGGUU	11	2	276	3	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16784532-16784939	Cluster_1622	Pocillopora_meandrina_HIv1___Sc0000003	16784532	16784939	408	123	59	0.991869918699187	+	AGACCCAUGGCAGACUUUUUG	40	27	30	46	14	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16794495-16794928	Cluster_1623	Pocillopora_meandrina_HIv1___Sc0000003	16794495	16794928	434	234	76	0.24358974358974358	.	AAGUCAUGAAGGUCAUCGGAAACCCCGA	42	2	231	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16874332-16874746	Cluster_1624	Pocillopora_meandrina_HIv1___Sc0000003	16874332	16874746	415	108	12	0.009259259259259259	-	GGCCGUGAUCGUAUAG	38	106	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16918402-16918829	Cluster_1625	Pocillopora_meandrina_HIv1___Sc0000003	16918402	16918829	428	253	126	0.841897233201581	+	UAAUUAGACUUGGAUGCGUGAUGCGAUA	21	2	234	2	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:16943989-16944596	Cluster_1626	Pocillopora_meandrina_HIv1___Sc0000003	16943989	16944596	608	397	106	0.010075566750629723	-	UACCAUAGAACUUUCAAGAACAUUUCAUC	141	8	368	3	5	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17032395-17032822	Cluster_1627	Pocillopora_meandrina_HIv1___Sc0000003	17032395	17032822	428	202	25	0.18316831683168316	-	UUUCCAGGUUGUCUGAUAAUUGUUGGGC	57	1	198	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17044493-17044906	Cluster_1628	Pocillopora_meandrina_HIv1___Sc0000003	17044493	17044906	414	125	41	0.624	.	UAGAGAGCUUAAGCAACGAACAUUUUUUC	13	75	45	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17111097-17111524	Cluster_1629	Pocillopora_meandrina_HIv1___Sc0000003	17111097	17111524	428	159	64	0.031446540880503145	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	34	0	150	1	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17413456-17414292	Cluster_1630	Pocillopora_meandrina_HIv1___Sc0000003	17413456	17414292	837	938	269	0.662046908315565	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	173	2	904	8	4	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17434778-17435282	Cluster_1631	Pocillopora_meandrina_HIv1___Sc0000003	17434778	17435282	505	24364	99	0.005253652930553275	-	UACCAAGGUCUUGUAGUCUAGUACAACU	14280	21	24258	6	14	15	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17468779-17469200	Cluster_1632	Pocillopora_meandrina_HIv1___Sc0000003	17468779	17469200	422	102	22	0.27450980392156865	.	CUUCAUUCUGAUCUAUUGUUACAGUUACAAC	29	0	99	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17494744-17495160	Cluster_1633	Pocillopora_meandrina_HIv1___Sc0000003	17494744	17495160	417	131	64	0.2366412213740458	.	CUCUGUAGCAGUCAAUU	32	45	73	0	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17512565-17513156	Cluster_1634	Pocillopora_meandrina_HIv1___Sc0000003	17512565	17513156	592	2998	420	0.9676450967311541	+	AAGGAGUUGAAAAGAACAAUGAUGUAGC	360	50	2845	6	17	29	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17513340-17514790	Cluster_1635	Pocillopora_meandrina_HIv1___Sc0000003	17513340	17514790	1451	5582	644	0.32246506628448585	.	AAGAAGAUCAGAGAAUGUUAAUUGAGA	539	43	4579	40	259	133	528	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17516367-17516781	Cluster_1636	Pocillopora_meandrina_HIv1___Sc0000003	17516367	17516781	415	148	22	0.9662162162162162	+	AUCCUUCGAUGUCGG	112	140	3	3	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17530878-17531307	Cluster_1637	Pocillopora_meandrina_HIv1___Sc0000003	17530878	17531307	430	403	41	0.9950372208436724	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	141	0	401	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17533552-17533975	Cluster_1638	Pocillopora_meandrina_HIv1___Sc0000003	17533552	17533975	424	174	69	0.011494252873563218	-	CAAAAACGCAUUUUCCUGCAAUCUGGA	30	8	130	0	4	28	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17622970-17623392	Cluster_1639	Pocillopora_meandrina_HIv1___Sc0000003	17622970	17623392	423	124	21	0.9919354838709677	+	GAGGACUUUGUAGCAACCUUGAC	41	34	35	1	0	41	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17651813-17652242	Cluster_1640	Pocillopora_meandrina_HIv1___Sc0000003	17651813	17652242	430	434	45	1.0	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	171	0	434	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17729364-17729792	Cluster_1641	Pocillopora_meandrina_HIv1___Sc0000003	17729364	17729792	429	299	138	0.07692307692307693	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	23	5	273	1	2	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17730014-17730841	Cluster_1642	Pocillopora_meandrina_HIv1___Sc0000003	17730014	17730841	828	1111	276	0.046804680468046804	-	UAAAGUUUACUUGUUGUUCUUCUCUGAGU	148	10	1039	2	5	36	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17733612-17734037	Cluster_1643	Pocillopora_meandrina_HIv1___Sc0000003	17733612	17734037	426	166	66	0.018072289156626505	-	UUUGAUUGACGUACGGUAUUUGAGACGC	21	7	153	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17787061-17787502	Cluster_1644	Pocillopora_meandrina_HIv1___Sc0000003	17787061	17787502	442	486	159	0.11316872427983539	-	UUAUUUUUGUUUCAAAUCGCCAUGUUCACU	64	16	419	4	2	5	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17824871-17825300	Cluster_1645	Pocillopora_meandrina_HIv1___Sc0000003	17824871	17825300	430	409	32	0.9975550122249389	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	169	0	409	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17891379-17891806	Cluster_1646	Pocillopora_meandrina_HIv1___Sc0000003	17891379	17891806	428	309	63	0.003236245954692557	-	UAGGCUGGUACCUUUGAAAAUUGAGGGC	52	6	279	0	0	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17906949-17907368	Cluster_1647	Pocillopora_meandrina_HIv1___Sc0000003	17906949	17907368	420	100	37	0.66	.	GCAACUUCCGCCUAGACUGAC	39	20	8	61	7	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17907446-17907876	Cluster_1648	Pocillopora_meandrina_HIv1___Sc0000003	17907446	17907876	431	866	148	0.0	-	AAGGAAACAAAUCGGUUUAAACUCACAUU	222	32	802	5	7	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17971672-17972100	Cluster_1649	Pocillopora_meandrina_HIv1___Sc0000003	17971672	17972100	429	181	44	0.988950276243094	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	73	0	167	0	0	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:17986627-17987042	Cluster_1650	Pocillopora_meandrina_HIv1___Sc0000003	17986627	17987042	416	218	36	0.9770642201834863	+	GACACUCUGUCUCGUA	68	216	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18010570-18011566	Cluster_1651	Pocillopora_meandrina_HIv1___Sc0000003	18010570	18011566	997	7630	538	0.982437745740498	+	UUGGACUGUGCAUAACCAUUUGU	2047	78	5245	1	97	2112	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18046159-18046588	Cluster_1652	Pocillopora_meandrina_HIv1___Sc0000003	18046159	18046588	430	362	134	1.0	+	GAAUCUUAAUCUUCUCUCUGAGCAUA	20	102	162	27	23	18	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18052632-18053169	Cluster_1653	Pocillopora_meandrina_HIv1___Sc0000003	18052632	18053169	538	7700	820	0.001948051948051948	-	CUGUGCCGACGACUGGAGACAC	1027	1086	1556	907	1736	1385	1030	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18105568-18105995	Cluster_1654	Pocillopora_meandrina_HIv1___Sc0000003	18105568	18105995	428	84	8	0.9880952380952381	+	UUGUCUACAGGAAGCCUGUCCAUUUUGU	76	3	78	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18106323-18106749	Cluster_1655	Pocillopora_meandrina_HIv1___Sc0000003	18106323	18106749	427	260	149	0.13846153846153847	-	UGAGUCGAGGUUAUUCACAAUACGAGC	28	8	231	1	2	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18107408-18107834	Cluster_1656	Pocillopora_meandrina_HIv1___Sc0000003	18107408	18107834	427	106	23	0.0660377358490566	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	53	1	97	4	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18350656-18351071	Cluster_1657	Pocillopora_meandrina_HIv1___Sc0000003	18350656	18351071	416	80	10	0.0	-	ACGACUUAAAUAAAGAACA	49	77	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18358791-18359210	Cluster_1658	Pocillopora_meandrina_HIv1___Sc0000003	18358791	18359210	420	123	42	0.008130081300813009	-	CGGAGACGUCGAAUUCUGG	19	53	55	7	7	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18668900-18669328	Cluster_1659	Pocillopora_meandrina_HIv1___Sc0000003	18668900	18669328	429	155	28	0.012903225806451613	-	UUCGAUCUUAAAUUUACUGCAUGUUUCUA	60	1	151	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18739258-18739686	Cluster_1660	Pocillopora_meandrina_HIv1___Sc0000003	18739258	18739686	429	273	125	0.9963369963369964	+	UAUUUUUAAUCUCUUGCAUACCCUGUUGG	25	3	268	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18836097-18836527	Cluster_1661	Pocillopora_meandrina_HIv1___Sc0000003	18836097	18836527	431	351	104	0.8233618233618234	+	AUUGAUUCUAUUUUGUACGGCCUAGU	87	11	320	0	3	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:18887952-18888505	Cluster_1662	Pocillopora_meandrina_HIv1___Sc0000003	18887952	18888505	554	2299	290	0.9069160504567203	+	UGAAGUCGAGCUAGAAGAGGA	521	1017	525	641	92	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19021624-19022037	Cluster_1663	Pocillopora_meandrina_HIv1___Sc0000003	19021624	19022037	414	206	152	0.9514563106796117	+	GAGGCUGUAGAGACU	6	102	42	23	17	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19027731-19028192	Cluster_1664	Pocillopora_meandrina_HIv1___Sc0000003	19027731	19028192	462	630	246	1.0	+	AUGCUGCCUUCCUUCUGAUA	42	261	200	66	33	29	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19032558-19032979	Cluster_1665	Pocillopora_meandrina_HIv1___Sc0000003	19032558	19032979	422	455	302	0.9978021978021978	+	CAUGUAUGUGGUCUUGAAAGA	9	100	212	46	29	29	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19040021-19040486	Cluster_1666	Pocillopora_meandrina_HIv1___Sc0000003	19040021	19040486	466	489	188	0.0	-	GAGAAAACCAUGCUGCCUUCCUUCUGAUA	37	171	178	55	22	31	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19253236-19253686	Cluster_1667	Pocillopora_meandrina_HIv1___Sc0000003	19253236	19253686	451	1309	190	0.93353705118411	+	UGAAGACUGGUCCUGAUAUCAUCAUAU	210	32	1186	12	5	62	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19272676-19273101	Cluster_1668	Pocillopora_meandrina_HIv1___Sc0000003	19272676	19273101	426	89	36	0.9325842696629213	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	34	0	86	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19309395-19309819	Cluster_1669	Pocillopora_meandrina_HIv1___Sc0000003	19309395	19309819	425	84	18	0.9523809523809523	+	AUGUGAAUGAUUCAUUUCAGGACUAGAUG	51	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19321353-19321776	Cluster_1670	Pocillopora_meandrina_HIv1___Sc0000003	19321353	19321776	424	138	59	0.9637681159420289	+	UAGGAUCGUUCUAGAAAACCAGCGUAAGA	25	2	128	1	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000003:19363636-19364061	Cluster_1671	Pocillopora_meandrina_HIv1___Sc0000003	19363636	19364061	426	104	37	0.9903846153846154	+	UGUGUAGAUAUGUCUUUUGGACAGGA	21	0	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12834-13749	Cluster_1672	Pocillopora_meandrina_HIv1___Sc0000004	12834	13749	916	973	372	0.8221993833504625	+	UGUUGAUUGCUGGUUGAAUAUGAUGUC	56	31	823	7	18	40	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13981-14409	Cluster_1673	Pocillopora_meandrina_HIv1___Sc0000004	13981	14409	429	151	17	0.9801324503311258	+	UUGACUGACAGAAGAUCUGGAAACUGAAGA	52	0	143	3	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:59217-59730	Cluster_1674	Pocillopora_meandrina_HIv1___Sc0000004	59217	59730	514	587	241	0.20442930153321975	.	UUUCAAAGCUUUUAUCAACUGUGGGA	24	5	530	5	2	20	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:60000-60401	Cluster_1675	Pocillopora_meandrina_HIv1___Sc0000004	60000	60401	402	167	79	0.029940119760479042	-	UGUAUUCUGCUACUGGUUCUCCCGAGC	20	3	159	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:61957-62666	Cluster_1676	Pocillopora_meandrina_HIv1___Sc0000004	61957	62666	710	341	140	0.07624633431085044	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	44	2	309	2	5	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:232180-233964	Cluster_1677	Pocillopora_meandrina_HIv1___Sc0000004	232180	233964	1785	4181	1402	0.9980865821573787	+	GGGGCGAUAAACCAUACAAUGGACAUUU	450	773	2707	134	175	220	172	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:234171-234601	Cluster_1678	Pocillopora_meandrina_HIv1___Sc0000004	234171	234601	431	491	312	0.9979633401221996	+	UGGCAUAAUCUGUGUGGAGGACCUCAUUC	19	129	238	22	31	31	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:259608-260035	Cluster_1679	Pocillopora_meandrina_HIv1___Sc0000004	259608	260035	428	140	28	0.6857142857142857	.	UGAAAUUCCGAAUAAGUUCUCCAAAACC	39	2	134	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:270457-271008	Cluster_1680	Pocillopora_meandrina_HIv1___Sc0000004	270457	271008	552	220	71	0.9363636363636364	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	39	6	191	1	2	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:271362-271960	Cluster_1681	Pocillopora_meandrina_HIv1___Sc0000004	271362	271960	599	1498	274	0.8110814419225634	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	502	9	1416	7	10	13	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:396741-397439	Cluster_1682	Pocillopora_meandrina_HIv1___Sc0000004	396741	397439	699	659	213	0.12139605462822459	-	UUGGAUAAUUUUGACGAAACCAGAGACA	156	6	595	3	15	13	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:397704-398313	Cluster_1683	Pocillopora_meandrina_HIv1___Sc0000004	397704	398313	610	531	226	0.704331450094162	.	UUAACUCCGAGGACACUCUUAGAAGGAUA	35	14	437	2	8	25	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:398645-399789	Cluster_1684	Pocillopora_meandrina_HIv1___Sc0000004	398645	399789	1145	1141	317	0.733567046450482	.	AGCAUACUCGAAGAACUGCAAGUUAAUGGA	114	116	985	4	12	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:400950-401796	Cluster_1685	Pocillopora_meandrina_HIv1___Sc0000004	400950	401796	847	616	195	0.25487012987012986	.	UGUGUUCGUUGAAUGGCUCCCCAUGCG	90	10	583	2	4	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:618407-618834	Cluster_1686	Pocillopora_meandrina_HIv1___Sc0000004	618407	618834	428	204	80	0.9852941176470589	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	30	1	193	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:619070-619497	Cluster_1687	Pocillopora_meandrina_HIv1___Sc0000004	619070	619497	428	343	170	0.8483965014577259	+	UCAUAACUGCUGGUUUGACGUAGUCGUC	34	23	292	2	2	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:620134-620834	Cluster_1688	Pocillopora_meandrina_HIv1___Sc0000004	620134	620834	701	165	57	0.9696969696969697	+	UAUUUGCACCGUUUUUCUUGAAUAUAGA	17	3	154	2	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:629145-629569	Cluster_1689	Pocillopora_meandrina_HIv1___Sc0000004	629145	629569	425	100	38	0.95	+	UGUGUAGAUAUGUCUUUUGGACAGGA	26	2	96	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:733349-733765	Cluster_1690	Pocillopora_meandrina_HIv1___Sc0000004	733349	733765	417	798	19	0.0012531328320802004	-	GACUCGGCCGUGGAUU	464	798	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:741145-741560	Cluster_1691	Pocillopora_meandrina_HIv1___Sc0000004	741145	741560	416	198	10	0.005050505050505051	-	GGGGGUGUGGCGGAAU	127	198	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:777820-778234	Cluster_1692	Pocillopora_meandrina_HIv1___Sc0000004	777820	778234	415	292	6	1.0	+	CUUUCCGAGGUCGGG	252	291	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:791121-791723	Cluster_1693	Pocillopora_meandrina_HIv1___Sc0000004	791121	791723	603	459	144	0.10457516339869281	-	UCGGACUGUGCAUAACCAUUUGCAAAC	121	1	439	1	4	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1005934-1006361	Cluster_1694	Pocillopora_meandrina_HIv1___Sc0000004	1005934	1006361	428	85	26	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	1	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1197941-1198368	Cluster_1695	Pocillopora_meandrina_HIv1___Sc0000004	1197941	1198368	428	292	49	0.06506849315068493	-	UGUGCAAUAUUAACUCUAAGCUGGUCUU	138	0	290	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1599741-1600171	Cluster_1696	Pocillopora_meandrina_HIv1___Sc0000004	1599741	1600171	431	282	10	0.0	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	273	0	282	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1686231-1686659	Cluster_1697	Pocillopora_meandrina_HIv1___Sc0000004	1686231	1686659	429	156	24	0.00641025641025641	-	UGAAGAUUUGAACAAUGUAAGAAUUGAAC	113	1	155	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1746478-1746899	Cluster_1698	Pocillopora_meandrina_HIv1___Sc0000004	1746478	1746899	422	75	2	0.0	-	UCUGACGAAGGGCUGACACUCG	74	0	0	0	74	1	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1820718-1821133	Cluster_1699	Pocillopora_meandrina_HIv1___Sc0000004	1820718	1821133	416	565	29	0.0017699115044247787	-	UGCUUGCAGUGCUCA	432	564	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:1826771-1827308	Cluster_1700	Pocillopora_meandrina_HIv1___Sc0000004	1826771	1827308	538	481	156	0.006237006237006237	-	UGAGUUGCACAGGACACCAACAUGU	44	154	152	29	62	27	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2224061-2224489	Cluster_1701	Pocillopora_meandrina_HIv1___Sc0000004	2224061	2224489	429	175	42	0.9828571428571429	+	AAACUGAUAAUAAUGCUCUCUGUGUCAUGC	65	2	151	0	1	2	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2261094-2261570	Cluster_1702	Pocillopora_meandrina_HIv1___Sc0000004	2261094	2261570	477	379	66	0.7704485488126649	.	UAAUCUUCAAUGGACGAUGCCAACUCUUUGA	184	1	370	4	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2308935-2309364	Cluster_1703	Pocillopora_meandrina_HIv1___Sc0000004	2308935	2309364	430	2683	80	0.009317927692881103	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAA	980	643	2007	15	4	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2741143-2741832	Cluster_1704	Pocillopora_meandrina_HIv1___Sc0000004	2741143	2741832	690	806	205	0.9205955334987593	+	AUUUGUGAAAGAAAUGAUUUGGAGACCCC	103	28	688	10	23	9	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2742408-2742838	Cluster_1705	Pocillopora_meandrina_HIv1___Sc0000004	2742408	2742838	431	1438	150	0.03129346314325452	-	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	374	3	1419	6	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2743597-2744025	Cluster_1706	Pocillopora_meandrina_HIv1___Sc0000004	2743597	2744025	429	259	45	0.7451737451737451	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	87	6	245	3	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2744502-2745277	Cluster_1707	Pocillopora_meandrina_HIv1___Sc0000004	2744502	2745277	776	1258	257	0.6526232114467408	.	UCACCAUGAAAAGACUCUGGGCCAAAG	132	7	1185	1	2	14	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2776672-2777091	Cluster_1708	Pocillopora_meandrina_HIv1___Sc0000004	2776672	2777091	420	2577	28	1.0	+	GAAGUUCUGGUUUAAAAAA	1040	2572	0	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2790767-2791317	Cluster_1709	Pocillopora_meandrina_HIv1___Sc0000004	2790767	2791317	551	3033	469	0.04418067919551599	-	UGUUUACGUUGUGCAUCCAUGGUUUUGU	435	10	2942	12	12	19	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2799128-2801583	Cluster_1710	Pocillopora_meandrina_HIv1___Sc0000004	2799128	2801583	2456	12024	3009	0.039254823685961414	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	466	155	11021	65	83	172	528	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2802251-2802679	Cluster_1711	Pocillopora_meandrina_HIv1___Sc0000004	2802251	2802679	429	377	175	0.22546419098143236	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	91	5	344	2	8	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2813610-2814136	Cluster_1712	Pocillopora_meandrina_HIv1___Sc0000004	2813610	2814136	527	460	260	0.013043478260869565	-	CUGCGAACUGCUUUGAGCCA	13	215	160	22	20	23	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:2814162-2814568	Cluster_1713	Pocillopora_meandrina_HIv1___Sc0000004	2814162	2814568	407	323	211	0.006191950464396285	-	GUUUGCGGUACUUUUUCAGAUUGUUUCGA	8	116	111	17	31	25	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3009069-3009494	Cluster_1714	Pocillopora_meandrina_HIv1___Sc0000004	3009069	3009494	426	127	66	0.14960629921259844	-	AUCUUUUUAAUUCACUGAAUCUCUUGGUA	34	10	108	2	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3088358-3088780	Cluster_1715	Pocillopora_meandrina_HIv1___Sc0000004	3088358	3088780	423	210	69	0.20952380952380953	.	UUCGCGUCUGAAGCUGUUAGAGU	60	17	39	10	27	114	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3245027-3246119	Cluster_1716	Pocillopora_meandrina_HIv1___Sc0000004	3245027	3246119	1093	129916	14574	0.9991994827426953	+	AAGGCGAGCUCAGCGAGAACA	2002	52926	38440	11166	10688	8114	8582	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3432324-3432751	Cluster_1717	Pocillopora_meandrina_HIv1___Sc0000004	3432324	3432751	428	266	82	0.05263157894736842	-	UCUAGCAGAUCGUACUCCUCAAGGUGCU	55	1	254	0	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3547202-3547617	Cluster_1718	Pocillopora_meandrina_HIv1___Sc0000004	3547202	3547617	416	283	19	1.0	+	CUUUCCGAGGUCGGG	142	283	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3629589-3630377	Cluster_1719	Pocillopora_meandrina_HIv1___Sc0000004	3629589	3630377	789	831	335	0.052948255114320095	-	UCCGUGACACAACGACUUUGCCUUGCUU	105	10	804	2	5	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3630547-3630994	Cluster_1720	Pocillopora_meandrina_HIv1___Sc0000004	3630547	3630994	448	456	204	0.19298245614035087	-	UAUGACGUUCCAGAAUCUUUGACAAAA	37	4	438	5	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3631518-3631946	Cluster_1721	Pocillopora_meandrina_HIv1___Sc0000004	3631518	3631946	429	151	51	0.019867549668874173	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	23	0	148	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3773185-3773605	Cluster_1722	Pocillopora_meandrina_HIv1___Sc0000004	3773185	3773605	421	178	115	0.011235955056179775	-	CAUGGGAUUCGGACUGUUUGACUAACCA	7	59	85	7	9	15	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3776194-3776606	Cluster_1723	Pocillopora_meandrina_HIv1___Sc0000004	3776194	3776606	413	251	173	0.0	-	CACAUCAAAGGCAAUGUAGGCUU	10	83	99	15	20	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3776662-3777077	Cluster_1724	Pocillopora_meandrina_HIv1___Sc0000004	3776662	3777077	416	220	130	0.00909090909090909	-	CUGCGUGGUAGAGCU	18	101	58	14	15	21	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3792382-3792808	Cluster_1725	Pocillopora_meandrina_HIv1___Sc0000004	3792382	3792808	427	153	47	0.954248366013072	+	UAAUCGUUGGCUUUUUCUCGAGACGUG	32	16	129	3	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:3842859-3843307	Cluster_1726	Pocillopora_meandrina_HIv1___Sc0000004	3842859	3843307	449	19727	300	0.0001520758351497947	-	UCCCGGACAGGCCCCCA	7300	19620	90	11	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4084450-4084929	Cluster_1727	Pocillopora_meandrina_HIv1___Sc0000004	4084450	4084929	480	391	77	0.015345268542199489	-	CAACAAAUCAAACUUAGAGGCUCUUCAGCGG	103	6	378	0	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4090054-4090483	Cluster_1728	Pocillopora_meandrina_HIv1___Sc0000004	4090054	4090483	430	266	82	0.9511278195488722	+	UGAACAUUCCGGUAUUCUUUUCGCUGAAUU	71	4	256	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4147734-4148148	Cluster_1729	Pocillopora_meandrina_HIv1___Sc0000004	4147734	4148148	415	93	9	0.989247311827957	+	CCGUGUUGUAGGCUG	38	92	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4163017-4163444	Cluster_1730	Pocillopora_meandrina_HIv1___Sc0000004	4163017	4163444	428	246	84	0.967479674796748	+	CCAUUUCCCAAGUAGUCUCUCUCAAAGG	56	10	219	2	3	12	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4166654-4167069	Cluster_1731	Pocillopora_meandrina_HIv1___Sc0000004	4166654	4167069	416	74	33	0.013513513513513514	-	UUGAGAUCUUUGUGACAGCCCUG	8	4	30	1	14	17	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4319817-4320236	Cluster_1732	Pocillopora_meandrina_HIv1___Sc0000004	4319817	4320236	420	148	56	0.8918918918918919	+	UGAAAAACUGUGACCGAGG	12	84	2	28	26	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4328549-4328979	Cluster_1733	Pocillopora_meandrina_HIv1___Sc0000004	4328549	4328979	431	538	70	0.9907063197026023	+	CGGCCUAAAAAAAAAAAAAAAAAAAAAAA	88	137	317	12	16	39	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4376005-4376654	Cluster_1734	Pocillopora_meandrina_HIv1___Sc0000004	4376005	4376654	650	748	290	0.1858288770053476	-	UGACUAUCAUCUGAAAGGGGCAAUUGGU	66	42	649	1	14	23	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4376700-4377128	Cluster_1735	Pocillopora_meandrina_HIv1___Sc0000004	4376700	4377128	429	233	84	0.8841201716738197	+	UAUGCAUUCAAUGAUCGUGGUCGG	29	0	166	0	4	10	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4378347-4378756	Cluster_1736	Pocillopora_meandrina_HIv1___Sc0000004	4378347	4378756	410	173	81	0.2658959537572254	.	UGUUACAAAACCAUUAGAACUAUCAGUU	25	7	134	1	7	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4378895-4379300	Cluster_1737	Pocillopora_meandrina_HIv1___Sc0000004	4378895	4379300	406	139	62	0.08633093525179857	-	UGCAUGUGCUUUGUCUUGGAUUUCAU	12	3	131	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4379913-4380388	Cluster_1738	Pocillopora_meandrina_HIv1___Sc0000004	4379913	4380388	476	277	91	0.8989169675090253	+	UUUUAUCUCUGCUAUUCCCAUAUCAAGG	40	5	264	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4406857-4407272	Cluster_1739	Pocillopora_meandrina_HIv1___Sc0000004	4406857	4407272	416	164	20	1.0	+	UGUCUGAGUGUCUAG	64	164	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4485347-4485775	Cluster_1740	Pocillopora_meandrina_HIv1___Sc0000004	4485347	4485775	429	183	92	0.14207650273224043	-	UAAUGAACGUAUAGCCAUCCAGUUGAACUGG	13	4	171	0	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4485789-4486375	Cluster_1741	Pocillopora_meandrina_HIv1___Sc0000004	4485789	4486375	587	353	208	0.16997167138810199	-	UGCAAAAGGAUAUAGGAUCAUAAUUAGC	11	6	319	2	5	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4726754-4727169	Cluster_1742	Pocillopora_meandrina_HIv1___Sc0000004	4726754	4727169	416	83	24	0.012048192771084338	-	AAACAUGGCUGAUGAGA	31	82	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4818222-4818644	Cluster_1743	Pocillopora_meandrina_HIv1___Sc0000004	4818222	4818644	423	249	177	0.9959839357429718	+	AAUGCGGUGGAAUCGAUAAA	7	98	82	14	21	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4819056-4819499	Cluster_1744	Pocillopora_meandrina_HIv1___Sc0000004	4819056	4819499	444	353	215	1.0	+	CAAGGCUGAGCGUGAGCGU	21	159	119	22	18	22	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4819737-4820268	Cluster_1745	Pocillopora_meandrina_HIv1___Sc0000004	4819737	4820268	532	507	365	1.0	+	AUUGGUUGUUGCUGCU	7	243	135	46	23	24	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4822114-4822622	Cluster_1746	Pocillopora_meandrina_HIv1___Sc0000004	4822114	4822622	509	565	386	0.9946902654867257	+	CCUGGUGACAAUGUUGGCU	9	215	185	43	54	31	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:4822935-4823767	Cluster_1747	Pocillopora_meandrina_HIv1___Sc0000004	4822935	4823767	833	1917	1115	1.0	+	AGUCAAUCAUGCUGUAGUAGUU	25	623	758	119	149	108	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5173418-5173842	Cluster_1748	Pocillopora_meandrina_HIv1___Sc0000004	5173418	5173842	425	93	36	0.03225806451612903	-	UUCUGCCGUUUUGGGCUUGCUUUGCCAUC	21	1	89	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5174422-5174919	Cluster_1749	Pocillopora_meandrina_HIv1___Sc0000004	5174422	5174919	498	1029	178	0.8707482993197279	+	UUCGAGUGCAAAGAUGAAGGAGCU	205	38	713	7	1	43	227	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5175571-5175998	Cluster_1750	Pocillopora_meandrina_HIv1___Sc0000004	5175571	5175998	428	181	70	0.10497237569060773	-	UAUAUUCGCCUGGAAUUAGCCCUCCCCCU	18	5	176	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5176317-5176743	Cluster_1751	Pocillopora_meandrina_HIv1___Sc0000004	5176317	5176743	427	121	49	0.024793388429752067	-	UGGGAUUGCUUACUCCUGGUGUUGGUAUA	15	3	113	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5176979-5177398	Cluster_1752	Pocillopora_meandrina_HIv1___Sc0000004	5176979	5177398	420	112	39	0.5625	.	UGACAAUGAACUCGACAGAAACUAUUUAG	21	2	105	4	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5178359-5178783	Cluster_1753	Pocillopora_meandrina_HIv1___Sc0000004	5178359	5178783	425	291	61	0.9175257731958762	+	AUGGACAGAACACAGGAAGUGCU	68	8	108	3	4	140	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5179682-5180102	Cluster_1754	Pocillopora_meandrina_HIv1___Sc0000004	5179682	5180102	421	92	20	0.010869565217391304	-	UGCGUUUCCAUUACUUCUGCGUAGAAUA	28	2	80	0	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5181414-5181831	Cluster_1755	Pocillopora_meandrina_HIv1___Sc0000004	5181414	5181831	418	95	37	0.031578947368421054	-	UGAAAUCUCCUGCUCCCUCUUUAAUGAGC	25	5	86	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5206769-5207196	Cluster_1756	Pocillopora_meandrina_HIv1___Sc0000004	5206769	5207196	428	182	52	0.016483516483516484	-	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	53	2	174	0	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5570359-5571044	Cluster_1757	Pocillopora_meandrina_HIv1___Sc0000004	5570359	5571044	686	4295	177	0.014668218859138533	-	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	1957	5	4244	0	11	8	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5608105-5608519	Cluster_1758	Pocillopora_meandrina_HIv1___Sc0000004	5608105	5608519	415	204	20	1.0	+	GAGACUUGAAGCGGC	124	204	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5736997-5737411	Cluster_1759	Pocillopora_meandrina_HIv1___Sc0000004	5736997	5737411	415	194	4	0.9948453608247423	+	AUGGACUAUGAUUUU	176	194	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5739982-5740397	Cluster_1760	Pocillopora_meandrina_HIv1___Sc0000004	5739982	5740397	416	13988	21	1.0	+	UUCCGAGGUCGCGGUU	13741	13987	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5767384-5767798	Cluster_1761	Pocillopora_meandrina_HIv1___Sc0000004	5767384	5767798	415	151	2	1.0	+	AUGGACUAUGAUUUU	148	151	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:5818426-5818896	Cluster_1762	Pocillopora_meandrina_HIv1___Sc0000004	5818426	5818896	471	783	271	0.9948914431673053	+	ACCAGGAUGGCCGAGU	112	581	90	39	20	22	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6050031-6050431	Cluster_1763	Pocillopora_meandrina_HIv1___Sc0000004	6050031	6050431	401	79	36	0.9873417721518988	+	UCAGCACGUGUACUAUGCUGCUCACUCGGU	16	8	69	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6086442-6086870	Cluster_1764	Pocillopora_meandrina_HIv1___Sc0000004	6086442	6086870	429	162	37	1.0	+	UCAACAUUUGUACUAUGCUGCUCACCCAGU	34	5	154	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6129917-6130369	Cluster_1765	Pocillopora_meandrina_HIv1___Sc0000004	6129917	6130369	453	296	115	0.5945945945945946	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	55	7	217	1	14	19	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6156616-6157953	Cluster_1766	Pocillopora_meandrina_HIv1___Sc0000004	6156616	6157953	1338	6278	1310	0.16804714877349475	-	UCACAGGUAUAUAUUCUAUCGCUCUUCAAC	930	95	5815	31	48	108	181	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6169126-6169554	Cluster_1767	Pocillopora_meandrina_HIv1___Sc0000004	6169126	6169554	429	617	77	0.9967585089141004	+	UCAGAGAUGUCAACCUUAUUGCUACUAGC	294	6	606	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6184636-6185065	Cluster_1768	Pocillopora_meandrina_HIv1___Sc0000004	6184636	6185065	430	115	36	1.0	+	UCAACAUGUGUACUAUGCUGCUCACCCGGU	25	1	111	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6216721-6217149	Cluster_1769	Pocillopora_meandrina_HIv1___Sc0000004	6216721	6217149	429	229	98	0.8122270742358079	+	UAACCUGUGCCACCCAAGCUUCGACUCGA	67	47	155	15	4	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6226334-6226763	Cluster_1770	Pocillopora_meandrina_HIv1___Sc0000004	6226334	6226763	430	116	30	1.0	+	UCAACAUGUGUACUAUGCUGCUCACCCGGU	37	0	114	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6280470-6280899	Cluster_1771	Pocillopora_meandrina_HIv1___Sc0000004	6280470	6280899	430	196	74	0.9846938775510204	+	UCAACAUGUGUACUAUGCUGCUCACUCGGU	45	11	171	3	5	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6320163-6320581	Cluster_1772	Pocillopora_meandrina_HIv1___Sc0000004	6320163	6320581	419	137	77	0.10218978102189781	-	UACUAGAAUCUAACGAACAGCUCGAACACU	13	0	132	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6321492-6321909	Cluster_1773	Pocillopora_meandrina_HIv1___Sc0000004	6321492	6321909	418	146	75	0.7808219178082192	.	UGUUCUGUGGACACAAUCGAC	15	85	3	52	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6357059-6357488	Cluster_1774	Pocillopora_meandrina_HIv1___Sc0000004	6357059	6357488	430	417	40	0.002398081534772182	-	ACAACACUUGUAUUAUGCCGCUCACUCAGU	163	28	359	2	10	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6506657-6507473	Cluster_1775	Pocillopora_meandrina_HIv1___Sc0000004	6506657	6507473	817	2174	533	0.16697332106715732	-	UACUGUACCAUCUAUGAAGCCAAAGCAAUU	300	19	1893	10	13	48	191	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6508229-6508662	Cluster_1776	Pocillopora_meandrina_HIv1___Sc0000004	6508229	6508662	434	760	242	0.9381578947368421	+	UGCUGAAACUGUUGCAUUUGAUUCUGUUGC	65	8	733	3	3	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6508735-6509166	Cluster_1777	Pocillopora_meandrina_HIv1___Sc0000004	6508735	6509166	432	432	200	0.7245370370370371	.	UGUUAACUUUAAAUCUUGGAAUUUUCA	85	24	338	8	11	19	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6593926-6594401	Cluster_1778	Pocillopora_meandrina_HIv1___Sc0000004	6593926	6594401	476	316	148	0.8829113924050633	+	GGUGAGAGACUGUGACCGAGG	24	164	14	81	33	15	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6749437-6750138	Cluster_1779	Pocillopora_meandrina_HIv1___Sc0000004	6749437	6750138	702	570	153	0.6684210526315789	.	UAGGAAGAUACAAGACUACAAAUUUU	62	17	503	4	3	16	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6750183-6750612	Cluster_1780	Pocillopora_meandrina_HIv1___Sc0000004	6750183	6750612	430	317	62	0.9873817034700315	+	UUAAUGCGGGAAACAGUACUAAUUACAUC	110	5	294	2	2	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6754228-6754644	Cluster_1781	Pocillopora_meandrina_HIv1___Sc0000004	6754228	6754644	417	110	11	0.9818181818181818	+	CGAGACGAGACGAGGAAA	51	110	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:6758212-6758642	Cluster_1782	Pocillopora_meandrina_HIv1___Sc0000004	6758212	6758642	431	179	59	0.9553072625698324	+	AUUACUGGAAAGGCACUUACUGUGGAAAGU	19	4	151	1	1	2	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7204213-7204632	Cluster_1783	Pocillopora_meandrina_HIv1___Sc0000004	7204213	7204632	420	756	38	0.996031746031746	+	CGGCCUGAAGAAAAAAA	97	725	1	27	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7260397-7260811	Cluster_1784	Pocillopora_meandrina_HIv1___Sc0000004	7260397	7260811	415	337	18	0.005934718100890208	-	UAGGGGCGAAAGACA	104	336	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7278323-7278737	Cluster_1785	Pocillopora_meandrina_HIv1___Sc0000004	7278323	7278737	415	413	18	0.9878934624697336	+	CCGUGUUGUAGGCUA	306	409	2	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7299894-7300321	Cluster_1786	Pocillopora_meandrina_HIv1___Sc0000004	7299894	7300321	428	185	29	0.005405405405405406	-	UUAUCUUUGCCAGUUCUGACGUACUCGU	81	1	181	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7319177-7319628	Cluster_1787	Pocillopora_meandrina_HIv1___Sc0000004	7319177	7319628	452	813	192	0.2976629766297663	.	UGAUUACAUCUUCCGUCUAUUCCUGCUGGGC	116	11	772	0	2	7	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7321650-7322737	Cluster_1788	Pocillopora_meandrina_HIv1___Sc0000004	7321650	7322737	1088	3259	1054	0.822951825713409	+	UCGUAUAGUAUGGAUCCUCGUGCAGUGA	102	71	2907	34	29	82	136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7323665-7324799	Cluster_1789	Pocillopora_meandrina_HIv1___Sc0000004	7323665	7324799	1135	11702	476	0.9956417706374978	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	3081	32	11355	134	12	19	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7445381-7445796	Cluster_1790	Pocillopora_meandrina_HIv1___Sc0000004	7445381	7445796	416	629	12	1.0	+	UUCCGGGGUCGCGGUC	526	629	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7456533-7456962	Cluster_1791	Pocillopora_meandrina_HIv1___Sc0000004	7456533	7456962	430	421	45	0.9928741092636579	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	204	0	420	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7490373-7490802	Cluster_1792	Pocillopora_meandrina_HIv1___Sc0000004	7490373	7490802	430	350	71	1.0	+	UAAGACUGUGUAACCCAAAAAGUUUGGAGU	84	30	320	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7558811-7560067	Cluster_1793	Pocillopora_meandrina_HIv1___Sc0000004	7558811	7560067	1257	4817	663	0.5160888519825617	.	UGGUAUUUUGAUUUUCUGAUCGACAAGA	773	120	4243	81	33	76	264	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7756727-7757147	Cluster_1794	Pocillopora_meandrina_HIv1___Sc0000004	7756727	7757147	421	3094	55	0.0	-	AACUUUCCGAGGUCGCGGUC	1946	3082	3	3	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7798149-7798564	Cluster_1795	Pocillopora_meandrina_HIv1___Sc0000004	7798149	7798564	416	323	22	0.9442724458204335	+	CCCUGCUAGAACCUCC	158	308	7	2	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7871307-7871723	Cluster_1796	Pocillopora_meandrina_HIv1___Sc0000004	7871307	7871723	417	441	38	0.015873015873015872	-	GACGAAUCGUGCGGCC	228	421	12	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:7966694-7967111	Cluster_1797	Pocillopora_meandrina_HIv1___Sc0000004	7966694	7967111	418	149	47	0.053691275167785234	-	AACGGACAGCUGAACCAC	33	111	13	10	9	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8058498-8058941	Cluster_1798	Pocillopora_meandrina_HIv1___Sc0000004	8058498	8058941	444	688	199	0.9869186046511628	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	70	2	677	2	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8059322-8060546	Cluster_1799	Pocillopora_meandrina_HIv1___Sc0000004	8059322	8060546	1225	1519	702	0.924292297564187	+	UAAAGUAUCAUUCCUCGUCACGAACCCG	35	11	1415	10	8	23	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8410167-8410583	Cluster_1800	Pocillopora_meandrina_HIv1___Sc0000004	8410167	8410583	417	162	101	0.8950617283950617	+	GCACAGGUUAUUUCUUACGGUGGAAUCA	22	22	103	17	7	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8677285-8678021	Cluster_1801	Pocillopora_meandrina_HIv1___Sc0000004	8677285	8678021	737	3943	614	0.9774283540451433	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	748	15	3863	5	3	17	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8679145-8680346	Cluster_1802	Pocillopora_meandrina_HIv1___Sc0000004	8679145	8680346	1202	2638	867	0.8256254738438211	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	103	38	2407	15	23	37	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8680807-8681689	Cluster_1803	Pocillopora_meandrina_HIv1___Sc0000004	8680807	8681689	883	4490	740	0.8514476614699332	+	UAUUGAUGUUCUGCUUCUCCUUGCUUGC	616	20	4268	33	14	56	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8681891-8682918	Cluster_1804	Pocillopora_meandrina_HIv1___Sc0000004	8681891	8682918	1028	4235	909	0.895159386068477	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	457	66	3945	17	18	72	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8682989-8683509	Cluster_1805	Pocillopora_meandrina_HIv1___Sc0000004	8682989	8683509	521	3539	498	0.5176603560327776	.	ACAAGACAGAAUUCCAGCUGAUACAGA	527	50	3245	8	31	70	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8684868-8685298	Cluster_1806	Pocillopora_meandrina_HIv1___Sc0000004	8684868	8685298	431	902	96	0.012195121951219513	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	525	4	874	2	3	2	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8686796-8688556	Cluster_1807	Pocillopora_meandrina_HIv1___Sc0000004	8686796	8688556	1761	2158	742	0.22103799814643188	.	UGUUCUAAUUUGAAAAUCUGCUUCUGUA	94	26	1977	7	6	37	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8689036-8689462	Cluster_1808	Pocillopora_meandrina_HIv1___Sc0000004	8689036	8689462	427	148	62	0.02027027027027027	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	21	1	145	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8689517-8690250	Cluster_1809	Pocillopora_meandrina_HIv1___Sc0000004	8689517	8690250	734	1138	309	0.070298769771529	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	119	13	1064	3	9	21	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8784956-8785443	Cluster_1810	Pocillopora_meandrina_HIv1___Sc0000004	8784956	8785443	488	278	59	0.9964028776978417	+	UACAUCACUGCUGGCUGAACUAAUUUGAUU	83	5	271	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8818786-8819213	Cluster_1811	Pocillopora_meandrina_HIv1___Sc0000004	8818786	8819213	428	230	96	0.7086956521739131	.	AUGUUGGAAAUUUGGCUGGAAUGAAGA	12	5	215	0	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8860296-8860710	Cluster_1812	Pocillopora_meandrina_HIv1___Sc0000004	8860296	8860710	415	189	132	0.015873015873015872	-	CAGGUGGUUGACCAGUAGAGU	7	53	55	25	18	22	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:8895053-8895928	Cluster_1813	Pocillopora_meandrina_HIv1___Sc0000004	8895053	8895928	876	1716	691	0.26165501165501165	.	GAAGGCUGCGUGUUCAGGUCACGUCGGGGU	69	935	412	184	54	90	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9012627-9013112	Cluster_1814	Pocillopora_meandrina_HIv1___Sc0000004	9012627	9013112	486	1166	310	0.002572898799313894	-	CAGCUAUGAUGACAAAAGGAUU	119	245	487	91	200	47	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9015416-9015843	Cluster_1815	Pocillopora_meandrina_HIv1___Sc0000004	9015416	9015843	428	271	118	0.0036900369003690036	-	AUCUGUACUAUUGAGUACCUCUGAGCUG	20	50	164	26	23	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9027334-9027793	Cluster_1816	Pocillopora_meandrina_HIv1___Sc0000004	9027334	9027793	460	1916	566	0.0005219206680584551	-	CAAUGGAUAAGGCAUCUGACUGCG	42	767	689	91	136	116	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9213473-9213903	Cluster_1817	Pocillopora_meandrina_HIv1___Sc0000004	9213473	9213903	431	307	103	0.1270358306188925	-	UAGCAGAUAUAAAUCGAGCAGGUAGAUC	47	11	230	7	5	52	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9356985-9357413	Cluster_1818	Pocillopora_meandrina_HIv1___Sc0000004	9356985	9357413	429	116	45	0.9827586206896551	+	UGUGAUUGCACGUUCUAUUCUCUGUUGUAU	37	6	100	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9389236-9389665	Cluster_1819	Pocillopora_meandrina_HIv1___Sc0000004	9389236	9389665	430	241	51	0.012448132780082987	-	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	110	4	201	0	2	1	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9487258-9487685	Cluster_1820	Pocillopora_meandrina_HIv1___Sc0000004	9487258	9487685	428	193	68	0.9948186528497409	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	4	182	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9601940-9602340	Cluster_1821	Pocillopora_meandrina_HIv1___Sc0000004	9601940	9602340	401	158	118	0.9620253164556962	+	UUCGAUCUUUCACUGUUGAGU	8	34	60	32	15	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9619758-9620185	Cluster_1822	Pocillopora_meandrina_HIv1___Sc0000004	9619758	9620185	428	214	103	0.7850467289719626	.	UGACUGAUGCAUUCUUUCUUUUCCACU	11	2	202	1	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9819034-9819448	Cluster_1823	Pocillopora_meandrina_HIv1___Sc0000004	9819034	9819448	415	115	10	0.0	-	ACGGAGAACUCUUUU	55	115	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9932247-9932676	Cluster_1824	Pocillopora_meandrina_HIv1___Sc0000004	9932247	9932676	430	255	48	0.050980392156862744	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	91	5	246	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9933800-9934300	Cluster_1825	Pocillopora_meandrina_HIv1___Sc0000004	9933800	9934300	501	512	204	0.5234375	.	AGCGAUUAGAAGAGCUAGACAUCAUCGAGA	92	6	472	3	4	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9934686-9936194	Cluster_1826	Pocillopora_meandrina_HIv1___Sc0000004	9934686	9936194	1509	4177	1231	0.3706009097438353	.	UGCAUACAUAGUUCACGUAGUCUUCUGC	204	60	3662	43	53	116	243	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9936436-9937029	Cluster_1827	Pocillopora_meandrina_HIv1___Sc0000004	9936436	9937029	594	1119	280	0.07059874888293119	-	UGAAUACAUGUAUGUCUGGAAA	118	10	869	1	121	98	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9953190-9953618	Cluster_1828	Pocillopora_meandrina_HIv1___Sc0000004	9953190	9953618	429	105	20	0.9714285714285714	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	43	0	105	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:9953718-9954182	Cluster_1829	Pocillopora_meandrina_HIv1___Sc0000004	9953718	9954182	465	261	88	0.9348659003831418	+	UUGGAACGUGUUGCUGAACGCUUGUUAU	73	9	222	2	0	23	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10093229-10093764	Cluster_1830	Pocillopora_meandrina_HIv1___Sc0000004	10093229	10093764	536	695	208	0.6575539568345323	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	76	25	631	4	12	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10204248-10204675	Cluster_1831	Pocillopora_meandrina_HIv1___Sc0000004	10204248	10204675	428	449	105	0.9799554565701559	+	UUGGUAAUAUUUUGCUUCUCGGCUGGCU	74	1	441	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10221371-10221799	Cluster_1832	Pocillopora_meandrina_HIv1___Sc0000004	10221371	10221799	429	141	46	0.9574468085106383	+	UGAGAUGUAAACUUGUGAAUCAUUAGCACA	56	2	135	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10269151-10269644	Cluster_1833	Pocillopora_meandrina_HIv1___Sc0000004	10269151	10269644	494	632	232	0.509493670886076	.	UAUGUCAACUGUAAAUUGUCCCUUCUUUU	43	7	569	9	3	16	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10271751-10272563	Cluster_1834	Pocillopora_meandrina_HIv1___Sc0000004	10271751	10272563	813	1118	196	0.014311270125223614	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	140	15	1012	0	3	66	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10281653-10282070	Cluster_1835	Pocillopora_meandrina_HIv1___Sc0000004	10281653	10282070	418	211	123	0.966824644549763	+	UUGGCUCUUUCACUUCGAACUGAUUUUGA	10	3	199	2	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10318379-10319161	Cluster_1836	Pocillopora_meandrina_HIv1___Sc0000004	10318379	10319161	783	825	233	0.8545454545454545	+	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	213	12	788	3	2	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10656026-10656455	Cluster_1837	Pocillopora_meandrina_HIv1___Sc0000004	10656026	10656455	430	216	67	0.18055555555555555	-	AUACUGAAAAACUUAAGUUACCAGAGCGUU	65	2	213	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10678089-10678495	Cluster_1838	Pocillopora_meandrina_HIv1___Sc0000004	10678089	10678495	407	152	70	1.0	+	UGAGUGUGCUUGUUGACUUCUGCUUGC	8	1	151	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10712608-10713456	Cluster_1839	Pocillopora_meandrina_HIv1___Sc0000004	10712608	10713456	849	753	230	0.10225763612217796	-	UUGGAUAAUUUUGACGAAACCAGAGACA	173	6	703	4	10	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10713720-10714264	Cluster_1840	Pocillopora_meandrina_HIv1___Sc0000004	10713720	10714264	545	355	155	0.9183098591549296	+	AGUUUGCUGAUUUCCUGGUGCUUUGCGA	26	6	285	5	4	17	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10714677-10715823	Cluster_1841	Pocillopora_meandrina_HIv1___Sc0000004	10714677	10715823	1147	1511	502	0.6730641958967571	.	AGCAUACUCGAAGAACUGCAAGUUAAUGG	111	137	1292	5	16	23	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10716059-10716485	Cluster_1842	Pocillopora_meandrina_HIv1___Sc0000004	10716059	10716485	427	355	177	0.17746478873239438	-	UCUCUUUUGUUGCUUGUAAAUUUAUGCA	37	9	325	3	1	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10716754-10717336	Cluster_1843	Pocillopora_meandrina_HIv1___Sc0000004	10716754	10717336	583	666	210	0.7372372372372372	.	AAGUUCAAGAUGGAUUUCAGGGCCAGAGU	88	13	623	1	2	3	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10718644-10719421	Cluster_1844	Pocillopora_meandrina_HIv1___Sc0000004	10718644	10719421	778	560	204	0.19464285714285715	-	UGUGUUCGUUGAAUGGCUCCCCAUGCG	88	91	430	24	9	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10869965-10870513	Cluster_1845	Pocillopora_meandrina_HIv1___Sc0000004	10869965	10870513	549	2067	517	0.0004837929366231253	-	UUGCACAGUCGGCACCGAGCAUGGC	415	379	1168	217	100	75	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10878018-10878448	Cluster_1846	Pocillopora_meandrina_HIv1___Sc0000004	10878018	10878448	431	760	234	0.02631578947368421	-	UGACUGACUGUGCUUGUGUACGAUACACGAC	72	6	726	1	4	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10878960-10879379	Cluster_1847	Pocillopora_meandrina_HIv1___Sc0000004	10878960	10879379	420	79	35	0.012658227848101266	-	UGUGUAGAUAUGUCUUUUGGACAGGA	18	0	78	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10921434-10921848	Cluster_1848	Pocillopora_meandrina_HIv1___Sc0000004	10921434	10921848	415	136	52	0.9852941176470589	+	CUCCUGACUGGCGCU	72	97	26	5	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:10924989-10925417	Cluster_1849	Pocillopora_meandrina_HIv1___Sc0000004	10924989	10925417	429	351	37	0.9287749287749287	+	UGUGAUGUAGAUUGCAACAUUUCGACUGC	140	13	328	2	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11040418-11041018	Cluster_1850	Pocillopora_meandrina_HIv1___Sc0000004	11040418	11041018	601	3203	223	0.091476740555729	-	UAGGUGAACCUUGCAAGUGGAUCUUUUGU	450	182	2690	17	34	41	239	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11044366-11044795	Cluster_1851	Pocillopora_meandrina_HIv1___Sc0000004	11044366	11044795	430	153	43	0.0	-	UCCGUGUGUUUGUUUGGAACAUAUUUACUC	34	8	143	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11338425-11338841	Cluster_1852	Pocillopora_meandrina_HIv1___Sc0000004	11338425	11338841	417	122	47	0.02459016393442623	-	UGUUUACUUUCUUUACAACUUCGGAUACGGG	22	0	120	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11359230-11359639	Cluster_1853	Pocillopora_meandrina_HIv1___Sc0000004	11359230	11359639	410	108	27	0.4537037037037037	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	32	2	106	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11406097-11406512	Cluster_1854	Pocillopora_meandrina_HIv1___Sc0000004	11406097	11406512	416	207	54	0.9758454106280193	+	UGUAUCCCAACCAAGU	140	142	60	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11425654-11426073	Cluster_1855	Pocillopora_meandrina_HIv1___Sc0000004	11425654	11426073	420	86	33	0.011627906976744186	-	UAGGUUCUUCCGACUUCAUUCCUGUAGC	24	0	85	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11493874-11494299	Cluster_1856	Pocillopora_meandrina_HIv1___Sc0000004	11493874	11494299	426	149	75	0.8590604026845637	+	UGAGUUGCUGCUUUGGACGAAAUUUCGA	37	3	129	4	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11495870-11496292	Cluster_1857	Pocillopora_meandrina_HIv1___Sc0000004	11495870	11496292	423	165	47	0.09090909090909091	-	AAUUGUGAUUUUGUUCAUUGAAUUUAG	33	2	154	1	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11497691-11498132	Cluster_1858	Pocillopora_meandrina_HIv1___Sc0000004	11497691	11498132	442	1048	102	0.9961832061068703	+	UGAGACUUUGAUUUUAACUGCUCUAAAAUGC	543	2	1037	3	5	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11655862-11656425	Cluster_1859	Pocillopora_meandrina_HIv1___Sc0000004	11655862	11656425	564	5596	592	0.001072194424588992	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1212	33	5537	1	9	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11656449-11658502	Cluster_1860	Pocillopora_meandrina_HIv1___Sc0000004	11656449	11658502	2054	5415	1764	0.02012927054478301	-	UCCGAUCUGUUUUCAAGGUUUUGACCACA	294	43	5128	42	28	69	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11732494-11732969	Cluster_1861	Pocillopora_meandrina_HIv1___Sc0000004	11732494	11732969	476	444	149	0.9391891891891891	+	UGAGUUGCUGCUUUGGACGAAAUUUCGA	63	3	412	8	3	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11736311-11736752	Cluster_1862	Pocillopora_meandrina_HIv1___Sc0000004	11736311	11736752	442	1013	98	0.9960513326752222	+	UGAGACUUUGAUUUUAACUGCUCUAAAAUGC	511	2	1000	2	7	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11903606-11904022	Cluster_1863	Pocillopora_meandrina_HIv1___Sc0000004	11903606	11904022	417	158	9	0.0	-	CGGCCUGAAAAAAAAAA	105	156	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:11950722-11951692	Cluster_1864	Pocillopora_meandrina_HIv1___Sc0000004	11950722	11951692	971	9898	1405	0.6549808042028693	.	UGCAAUCACAAUGAGCAGACAGAACUUUGC	690	214	8654	137	171	372	350	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12450173-12450798	Cluster_1865	Pocillopora_meandrina_HIv1___Sc0000004	12450173	12450798	626	540	276	0.6833333333333333	.	CUGUCUCUUAGAACACACGCCUGG	28	15	407	5	9	16	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12500684-12501113	Cluster_1866	Pocillopora_meandrina_HIv1___Sc0000004	12500684	12501113	430	378	69	0.7962962962962963	.	UAAGAUCUGAUACAUUCUUUGGCGGUGGUC	86	0	362	1	3	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12648235-12648664	Cluster_1867	Pocillopora_meandrina_HIv1___Sc0000004	12648235	12648664	430	140	57	0.9357142857142857	+	UGUUUACUUUCUUUACAACUUCGGAUACGGG	27	1	133	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12850438-12850857	Cluster_1868	Pocillopora_meandrina_HIv1___Sc0000004	12850438	12850857	420	264	155	0.9848484848484849	+	UUAUUCAUUUUACUUCUCCUUC	15	85	67	36	41	26	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:12885677-12886106	Cluster_1869	Pocillopora_meandrina_HIv1___Sc0000004	12885677	12886106	430	190	30	0.0	-	UCAACAGCCUGAACUUGUCUUCACAAGACU	65	0	188	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13474937-13475384	Cluster_1870	Pocillopora_meandrina_HIv1___Sc0000004	13474937	13475384	448	571	172	0.9281961471103327	+	UGUUCUCUAUCAGGUACACGGACAGGAU	38	18	531	0	5	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13494281-13494708	Cluster_1871	Pocillopora_meandrina_HIv1___Sc0000004	13494281	13494708	428	181	44	0.994475138121547	+	UGGACGGUUCAACUCCGAGACUUUGC	42	6	174	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13496622-13497813	Cluster_1872	Pocillopora_meandrina_HIv1___Sc0000004	13496622	13497813	1192	3191	888	0.22814164838608586	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	536	41	2870	20	140	38	82	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13499231-13501214	Cluster_1873	Pocillopora_meandrina_HIv1___Sc0000004	13499231	13501214	1984	4674	1457	0.7768506632434745	.	UUACGAAAUAUCUGAUGGCUGAUC	242	70	3960	41	13	130	460	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13564133-13565479	Cluster_1874	Pocillopora_meandrina_HIv1___Sc0000004	13564133	13565479	1347	31001	2318	0.9916454307925551	+	UUGGAAUGUGUUACUGAAUGCUUGUUACA	2487	644	29810	56	123	216	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13565829-13566247	Cluster_1875	Pocillopora_meandrina_HIv1___Sc0000004	13565829	13566247	419	169	73	0.9940828402366864	+	UCUGGUACAUUUCAUAAAUCUGUGGUCUCC	33	8	152	1	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13566431-13567156	Cluster_1876	Pocillopora_meandrina_HIv1___Sc0000004	13566431	13567156	726	754	259	0.9986737400530504	+	UUUUAUCUUGAGCAUACACUUAUCUACUGU	56	6	704	4	9	23	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13567324-13567893	Cluster_1877	Pocillopora_meandrina_HIv1___Sc0000004	13567324	13567893	570	4135	630	0.6432889963724304	.	UACGUCUGGCCAGCAAUCAACAUCGUC	599	94	3589	66	46	118	222	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13569155-13569583	Cluster_1878	Pocillopora_meandrina_HIv1___Sc0000004	13569155	13569583	429	436	119	0.9587155963302753	+	UGUAGAAUCAAUCUGUUACUAAGACACC	97	3	407	11	0	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13572742-13574934	Cluster_1879	Pocillopora_meandrina_HIv1___Sc0000004	13572742	13574934	2193	4006	1250	0.982026959560659	+	UAGGACGUACGUAUAGACCUUUUCUUGAAA	194	52	3842	11	30	36	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13574985-13576253	Cluster_1880	Pocillopora_meandrina_HIv1___Sc0000004	13574985	13576253	1269	7642	1195	0.9717351478670505	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1499	71	7292	25	50	98	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13577716-13578146	Cluster_1881	Pocillopora_meandrina_HIv1___Sc0000004	13577716	13578146	431	279	83	0.985663082437276	+	UGCUCUUCAUUUUUGUUGUUGGUUGAACAC	94	7	267	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13579375-13579803	Cluster_1882	Pocillopora_meandrina_HIv1___Sc0000004	13579375	13579803	429	206	86	0.9951456310679612	+	UAAGCUGUGUUUCCUGAUCUGUUAAAUUGC	25	14	188	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13581537-13581964	Cluster_1883	Pocillopora_meandrina_HIv1___Sc0000004	13581537	13581964	428	235	106	0.948936170212766	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	61	3	226	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13582131-13582767	Cluster_1884	Pocillopora_meandrina_HIv1___Sc0000004	13582131	13582767	637	679	218	0.8114874815905744	+	UGCGAUCCAAAGUAGAAGAAAAUUUAUU	60	6	607	3	8	20	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13583661-13584178	Cluster_1885	Pocillopora_meandrina_HIv1___Sc0000004	13583661	13584178	518	5666	391	0.9994705259442287	+	UAUCUUUGCCAGUUCUGACGUACUCGCAC	990	59	5561	4	10	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13587138-13587564	Cluster_1886	Pocillopora_meandrina_HIv1___Sc0000004	13587138	13587564	427	130	50	0.9846153846153847	+	UGUUAUCACCAGGCCUUGCACGACAUCUGC	39	9	115	0	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13590591-13591003	Cluster_1887	Pocillopora_meandrina_HIv1___Sc0000004	13590591	13591003	413	211	118	0.995260663507109	+	UACUGUUUGAAACCGGCUUGUUUACUCA	23	3	202	2	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13591093-13591519	Cluster_1888	Pocillopora_meandrina_HIv1___Sc0000004	13591093	13591519	427	173	70	0.9364161849710982	+	UGCUCGACCUUUGCAACACCAAUUUGUUU	33	9	162	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13592684-13593096	Cluster_1889	Pocillopora_meandrina_HIv1___Sc0000004	13592684	13593096	413	185	103	0.8864864864864865	+	UGAGUAUGUCGCGCUCCGUCCUGACGAAG	26	15	161	5	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13595554-13595969	Cluster_1890	Pocillopora_meandrina_HIv1___Sc0000004	13595554	13595969	416	189	76	0.873015873015873	+	GGUUUCGUAGUGUAGG	49	155	8	18	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13597761-13598280	Cluster_1891	Pocillopora_meandrina_HIv1___Sc0000004	13597761	13598280	520	236	110	0.9957627118644068	+	UGGACUUUAAACUGCAGAUCUGAUUGUUUC	12	7	201	2	9	15	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13598565-13599174	Cluster_1892	Pocillopora_meandrina_HIv1___Sc0000004	13598565	13599174	610	553	229	0.9891500904159132	+	UUGGAUUUUUGUGUGGUUGAGACCAAGACA	82	11	524	3	1	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13599546-13600020	Cluster_1893	Pocillopora_meandrina_HIv1___Sc0000004	13599546	13600020	475	370	163	0.9783783783783784	+	UGUUCAGGGCGUCUAUCUCUUUGCGGUU	21	6	357	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13600817-13601256	Cluster_1894	Pocillopora_meandrina_HIv1___Sc0000004	13600817	13601256	440	377	129	1.0	+	UCCAUUUCCUGUAGCAAAAUUAAGCUGG	49	5	358	1	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13602742-13603145	Cluster_1895	Pocillopora_meandrina_HIv1___Sc0000004	13602742	13603145	404	191	104	0.9947643979057592	+	UGAAAUCUUGAGGGUCAUGUCUGAUACUG	17	7	179	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13603945-13604523	Cluster_1896	Pocillopora_meandrina_HIv1___Sc0000004	13603945	13604523	579	422	207	1.0	+	UGAAUUCCACAAGUGCCUGUAAGAAGUGGC	24	10	390	5	6	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13606418-13606901	Cluster_1897	Pocillopora_meandrina_HIv1___Sc0000004	13606418	13606901	484	538	165	0.9572490706319703	+	UUAUCAGUAUCUUCAAAGUUUGUCAUCAAG	96	11	517	2	6	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13608188-13608970	Cluster_1898	Pocillopora_meandrina_HIv1___Sc0000004	13608188	13608970	783	451	221	0.3348115299334812	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	38	40	358	14	21	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13613398-13614371	Cluster_1899	Pocillopora_meandrina_HIv1___Sc0000004	13613398	13614371	974	999	265	0.970970970970971	+	UAUCGCUAUGAAUAUUUGAAACGUUUUUCAU	96	4	982	2	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13617463-13617893	Cluster_1900	Pocillopora_meandrina_HIv1___Sc0000004	13617463	13617893	431	264	110	0.9242424242424242	+	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	25	1	245	1	0	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13618974-13619528	Cluster_1901	Pocillopora_meandrina_HIv1___Sc0000004	13618974	13619528	555	604	280	0.8973509933774835	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	48	5	572	4	10	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13620022-13620730	Cluster_1902	Pocillopora_meandrina_HIv1___Sc0000004	13620022	13620730	709	10945	621	0.9917770671539515	+	UUAAAGGGGAAGACAAUACAUCUGUGUGA	2173	33	10850	5	3	17	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13621027-13621760	Cluster_1903	Pocillopora_meandrina_HIv1___Sc0000004	13621027	13621760	734	10277	1065	0.9724627809672083	+	UGUGACAGCUCCUUUCCUCUUGCAAAG	902	139	9033	784	105	56	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13634452-13634859	Cluster_1904	Pocillopora_meandrina_HIv1___Sc0000004	13634452	13634859	408	268	161	0.7388059701492538	.	UUUACACCGGCUCUUGUUACCAUUUGG	12	2	253	0	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13636486-13637031	Cluster_1905	Pocillopora_meandrina_HIv1___Sc0000004	13636486	13637031	546	815	196	0.8858895705521472	+	UUGGAAAAAUCUGCUGUAAUUUGCUGC	247	5	766	3	5	19	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13638673-13639096	Cluster_1906	Pocillopora_meandrina_HIv1___Sc0000004	13638673	13639096	424	242	127	1.0	+	UGCAAUGUUUUUCGGCGUGUUGGGACGGU	19	7	229	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13639479-13639907	Cluster_1907	Pocillopora_meandrina_HIv1___Sc0000004	13639479	13639907	429	399	103	0.9448621553884712	+	UUCGAGCUAUCACUGAAAGAGGGAGUGGU	94	6	372	5	4	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13641819-13642305	Cluster_1908	Pocillopora_meandrina_HIv1___Sc0000004	13641819	13642305	487	696	171	0.8290229885057471	+	UUCUGCUUGCACCGUGACUCUGCAUGGC	98	3	650	2	1	11	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13642615-13644807	Cluster_1909	Pocillopora_meandrina_HIv1___Sc0000004	13642615	13644807	2193	23601	2909	0.9608491165628575	+	UAGCGUAUUACAGAAAAAAGAAAACAGAGU	1351	262	22263	272	130	229	445	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13646347-13646766	Cluster_1910	Pocillopora_meandrina_HIv1___Sc0000004	13646347	13646766	420	186	96	0.989247311827957	+	UGUUGUGUUCUUCAUCUGAUGUAUCGUC	20	9	169	0	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13648557-13648986	Cluster_1911	Pocillopora_meandrina_HIv1___Sc0000004	13648557	13648986	430	144	23	1.0	+	UUGACGACUUGUAACUUAAACUUGAAUAUU	100	1	142	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13659908-13660787	Cluster_1912	Pocillopora_meandrina_HIv1___Sc0000004	13659908	13660787	880	1170	372	0.805982905982906	+	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	114	15	1066	7	7	19	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13664298-13664728	Cluster_1913	Pocillopora_meandrina_HIv1___Sc0000004	13664298	13664728	431	228	49	0.9912280701754386	+	UUGGAACACUACAAGACUACUGAGCUCUUGU	97	4	224	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13665700-13666634	Cluster_1914	Pocillopora_meandrina_HIv1___Sc0000004	13665700	13666634	935	1700	265	0.9970588235294118	+	UUUGUUGUGUUUUUUGAUCGUGGGCAUC	334	7	1682	0	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13667018-13667446	Cluster_1915	Pocillopora_meandrina_HIv1___Sc0000004	13667018	13667446	429	359	117	0.9916434540389972	+	UGUAACAAAGAAGUACUACUGAUCACAUU	51	3	349	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13669366-13671054	Cluster_1916	Pocillopora_meandrina_HIv1___Sc0000004	13669366	13671054	1689	8627	1505	0.9200185464240176	+	UGUAACUUUGAGCUUCUUUUUUGCAGGA	1333	79	8270	27	44	82	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13673697-13674124	Cluster_1917	Pocillopora_meandrina_HIv1___Sc0000004	13673697	13674124	428	239	95	0.9748953974895398	+	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	55	1	233	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13674660-13675100	Cluster_1918	Pocillopora_meandrina_HIv1___Sc0000004	13674660	13675100	441	435	172	0.9540229885057471	+	UAAAGUCUGUGUCAUUUUGAAGGAACGUGU	39	1	409	1	4	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13684665-13685578	Cluster_1919	Pocillopora_meandrina_HIv1___Sc0000004	13684665	13685578	914	1658	533	0.9927623642943305	+	UAAGACAAGUACUUCAAACACUCUCUAGUAG	131	18	1587	9	5	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13685594-13686075	Cluster_1920	Pocillopora_meandrina_HIv1___Sc0000004	13685594	13686075	482	431	231	0.962877030162413	+	UGAUUUUUGUUCUUUUUGUUGAGGCUGCAA	22	3	414	1	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13686369-13687756	Cluster_1921	Pocillopora_meandrina_HIv1___Sc0000004	13686369	13687756	1388	5184	1001	0.9924768518518519	+	UUGUAACUGCGAUCGUUCUUUGGAGC	307	38	4803	18	107	140	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13694373-13695079	Cluster_1922	Pocillopora_meandrina_HIv1___Sc0000004	13694373	13695079	707	541	218	0.9704251386321626	+	UAGGCUCGUGUGCACAACAACUGUACAGC	26	7	522	0	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13698678-13699095	Cluster_1923	Pocillopora_meandrina_HIv1___Sc0000004	13698678	13699095	418	282	52	1.0	+	AUCCCACUCCUGACACCA	97	262	19	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13700023-13700732	Cluster_1924	Pocillopora_meandrina_HIv1___Sc0000004	13700023	13700732	710	738	108	0.9986449864498645	+	UGAAUGCUCGUUGCUCGACUGAUUGUAC	95	6	725	2	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13727111-13727724	Cluster_1925	Pocillopora_meandrina_HIv1___Sc0000004	13727111	13727724	614	623	213	0.709470304975923	.	UUCGGCAAAAACUAAAAGCGGGCGAAGA	166	4	573	3	1	7	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:13999966-14000673	Cluster_1926	Pocillopora_meandrina_HIv1___Sc0000004	13999966	14000673	708	291	93	0.11683848797250859	-	UGAUGCAAUCUGUUUCUGCAUGAGGGCUGC	56	4	260	5	8	13	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14003220-14003636	Cluster_1927	Pocillopora_meandrina_HIv1___Sc0000004	14003220	14003636	417	272	29	0.014705882352941176	-	CGGCCUGAAAAAAAAAA	196	254	2	8	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14004713-14005502	Cluster_1928	Pocillopora_meandrina_HIv1___Sc0000004	14004713	14005502	790	1715	305	0.9504373177842566	+	UUUGAUAUAAAGGUUGUGGAAAAACAGU	174	13	1634	6	10	27	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14017575-14018002	Cluster_1929	Pocillopora_meandrina_HIv1___Sc0000004	14017575	14018002	428	86	15	0.9883720930232558	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	31	0	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14021015-14021442	Cluster_1930	Pocillopora_meandrina_HIv1___Sc0000004	14021015	14021442	428	125	33	0.216	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	56	4	120	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14041691-14042119	Cluster_1931	Pocillopora_meandrina_HIv1___Sc0000004	14041691	14042119	429	107	25	0.018691588785046728	-	UGAGUUCUACUGUAACGACUGAAUAGACU	38	1	99	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14102642-14104377	Cluster_1932	Pocillopora_meandrina_HIv1___Sc0000004	14102642	14104377	1736	6954	1502	0.030486051193557663	-	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	871	53	6697	11	39	89	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14111260-14111688	Cluster_1933	Pocillopora_meandrina_HIv1___Sc0000004	14111260	14111688	429	731	141	0.948016415868673	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	265	4	718	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14385956-14386385	Cluster_1934	Pocillopora_meandrina_HIv1___Sc0000004	14385956	14386385	430	1219	70	0.002461033634126333	-	GGGGUGGACUGUGUUCCAGAAAAGACUGG	341	90	976	6	137	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14397922-14398333	Cluster_1935	Pocillopora_meandrina_HIv1___Sc0000004	14397922	14398333	412	131	57	0.9847328244274809	+	UGAAACCGAAGACCUGCUAGUAUUUUUGC	36	5	125	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14404363-14404780	Cluster_1936	Pocillopora_meandrina_HIv1___Sc0000004	14404363	14404780	418	104	30	0.9134615384615384	+	UACGUCUAAAGGAUCUGAAUAUUCAUCAUC	26	11	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14405011-14406005	Cluster_1937	Pocillopora_meandrina_HIv1___Sc0000004	14405011	14406005	995	1168	567	0.6164383561643836	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	66	26	1012	8	14	35	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14407136-14407748	Cluster_1938	Pocillopora_meandrina_HIv1___Sc0000004	14407136	14407748	613	604	277	0.17052980132450332	-	UUCCUGCACCAUUGCAUGUUAACUUCUGC	69	10	527	7	3	10	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14411244-14411670	Cluster_1939	Pocillopora_meandrina_HIv1___Sc0000004	14411244	14411670	427	240	115	0.9958333333333333	+	UGCUUUCUUGGUCUAGGGUUACUCACU	30	9	230	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14426820-14427248	Cluster_1940	Pocillopora_meandrina_HIv1___Sc0000004	14426820	14427248	429	160	46	0.99375	+	UGUUUACUGGUGACUGAAGGAGAACUGGU	69	4	154	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14428694-14429347	Cluster_1941	Pocillopora_meandrina_HIv1___Sc0000004	14428694	14429347	654	569	209	0.9964850615114236	+	UGUCAGAACUGUCUUCGCUUGUAGAAAC	52	10	549	2	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14456143-14456570	Cluster_1942	Pocillopora_meandrina_HIv1___Sc0000004	14456143	14456570	428	130	37	0.9384615384615385	+	AGAGUACCCCAAAACCGCCUGACUAGUUGC	33	6	109	2	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14459119-14459655	Cluster_1943	Pocillopora_meandrina_HIv1___Sc0000004	14459119	14459655	537	444	156	0.9684684684684685	+	UUUCUCUUCUGAAUGUUGAUUAUAAUAUUUC	43	37	358	18	5	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14482156-14482583	Cluster_1944	Pocillopora_meandrina_HIv1___Sc0000004	14482156	14482583	428	203	83	0.009852216748768473	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	3	194	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14507848-14509088	Cluster_1945	Pocillopora_meandrina_HIv1___Sc0000004	14507848	14509088	1241	13804	1421	0.9414662416690814	+	UUUUAACACUCUUGACUGCAUCUUUGC	1868	54	13060	16	26	75	573	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14517602-14518021	Cluster_1946	Pocillopora_meandrina_HIv1___Sc0000004	14517602	14518021	420	187	34	0.0	-	CAUGGGUUGGAUUAGGUCUG	25	122	4	20	30	10	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14564791-14565386	Cluster_1947	Pocillopora_meandrina_HIv1___Sc0000004	14564791	14565386	596	815	429	0.3214723926380368	.	UUAAAAAGACGAGCUCGACG	36	429	37	266	55	23	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14565484-14565919	Cluster_1948	Pocillopora_meandrina_HIv1___Sc0000004	14565484	14565919	436	313	155	0.009584664536741214	-	CAAGUGUAGUAUCUGUUCC	30	109	152	6	14	21	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000004:14566036-14566562	Cluster_1949	Pocillopora_meandrina_HIv1___Sc0000004	14566036	14566562	527	75780	2415	0.9999076273423066	+	CCCCGUGUUGUAGGCUU	8615	40987	18136	1885	3360	6664	4748	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14567165-14567722	Cluster_1950	Pocillopora_meandrina_HIv1___Sc0000004	14567165	14567722	558	2198	659	0.001364877161055505	-	CGUUCGCGCUCGUCCCCGC	443	1382	297	204	192	90	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000004:14578808-14579344	Cluster_1951	Pocillopora_meandrina_HIv1___Sc0000004	14578808	14579344	537	18409	2315	0.0008691400945189853	-	AAACUGAUUUUUGGAACUGGGCU	531	3237	9534	775	1392	1964	1507	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:31376-31900	Cluster_1952	Pocillopora_meandrina_HIv1___Sc0000005	31376	31900	525	5025	817	0.01791044776119403	-	AUAAGGACGAGAAAAGUCUUCGGACU	468	1381	2575	230	169	279	391	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:195248-196690	Cluster_1953	Pocillopora_meandrina_HIv1___Sc0000005	195248	196690	1443	1987	854	0.953195772521389	+	UUUUGAACUUCAAUAUCAUAGACUUGGU	46	21	1856	12	17	29	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:246548-247012	Cluster_1954	Pocillopora_meandrina_HIv1___Sc0000005	246548	247012	465	698	275	0.0057306590257879654	-	ACGCAUGUCAAAUGAGAAGUAACAAGAC	125	60	477	32	33	28	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:356378-356805	Cluster_1955	Pocillopora_meandrina_HIv1___Sc0000005	356378	356805	428	256	140	0.87109375	+	UAAAUCUCGCGGCUCCAAUGUGAAUGUC	13	8	236	0	1	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:356826-357239	Cluster_1956	Pocillopora_meandrina_HIv1___Sc0000005	356826	357239	414	131	90	0.7862595419847328	.	UGAGUAAAUGCUGUAAAGUCUAGGACC	7	2	114	1	5	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:361424-361859	Cluster_1957	Pocillopora_meandrina_HIv1___Sc0000005	361424	361859	436	208	91	0.07211538461538461	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	33	0	193	1	2	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:363137-363572	Cluster_1958	Pocillopora_meandrina_HIv1___Sc0000005	363137	363572	436	790	235	0.05443037974683544	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	145	5	755	3	4	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:363914-364343	Cluster_1959	Pocillopora_meandrina_HIv1___Sc0000005	363914	364343	430	667	188	0.010494752623688156	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	128	4	652	1	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:409567-409984	Cluster_1960	Pocillopora_meandrina_HIv1___Sc0000005	409567	409984	418	878	60	0.04441913439635535	-	UUCCGAGGUCGCGAUC	277	854	16	3	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:601572-601666	Cluster_1961	Pocillopora_meandrina_HIv1___Sc0000005	601572	601666	95	132737	489	0.9999924663055516	+	AAAGAAGUACAAGUGGUAGGG	42404	45050	6	66825	20621	230	5	N	Y	nve-miR-2023-3p
Pocillopora_meandrina_HIv1___Sc0000005:669644-670065	Cluster_1962	Pocillopora_meandrina_HIv1___Sc0000005	669644	670065	422	88	33	0.022727272727272728	-	UUUCUUGAUCAAUUUGUGAAUGUCUGCA	12	2	82	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:677665-678093	Cluster_1963	Pocillopora_meandrina_HIv1___Sc0000005	677665	678093	429	288	92	0.003472222222222222	-	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	74	6	275	2	4	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:678163-679515	Cluster_1964	Pocillopora_meandrina_HIv1___Sc0000005	678163	679515	1353	3856	607	0.0031120331950207467	-	UGAUUAAAAGUUCUGUUAAAUUAUCUGAU	690	27	3766	15	10	14	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:739031-739446	Cluster_1965	Pocillopora_meandrina_HIv1___Sc0000005	739031	739446	416	279	10	0.0035842293906810036	-	CCCUCCGGUGCCUCCA	119	279	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:855676-856094	Cluster_1966	Pocillopora_meandrina_HIv1___Sc0000005	855676	856094	419	247	26	0.9919028340080972	+	CGGCCUGAAAAAAAAAA	90	225	2	8	8	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:928036-928463	Cluster_1967	Pocillopora_meandrina_HIv1___Sc0000005	928036	928463	428	422	268	0.985781990521327	+	CAGUAGCUGAACUCUCAUAUGAGCACGU	17	90	223	26	18	31	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1070194-1070609	Cluster_1968	Pocillopora_meandrina_HIv1___Sc0000005	1070194	1070609	416	109	7	0.01834862385321101	-	CGAUCUGGCUGCGACA	84	108	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1117149-1117569	Cluster_1969	Pocillopora_meandrina_HIv1___Sc0000005	1117149	1117569	421	128	42	0.8984375	+	UUUCGUGCUCUAGCCGCUUCA	62	15	6	91	14	2	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1318572-1318986	Cluster_1970	Pocillopora_meandrina_HIv1___Sc0000005	1318572	1318986	415	223	100	0.9775784753363229	+	CCGUGGUGGACUGCC	69	149	39	11	12	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1395499-1395914	Cluster_1971	Pocillopora_meandrina_HIv1___Sc0000005	1395499	1395914	416	147	14	1.0	+	CUAGUACUGUGAAACU	92	147	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1509568-1509998	Cluster_1972	Pocillopora_meandrina_HIv1___Sc0000005	1509568	1509998	431	296	131	0.05405405405405406	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	20	1	291	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1510019-1510441	Cluster_1973	Pocillopora_meandrina_HIv1___Sc0000005	1510019	1510441	423	239	136	0.16736401673640167	-	UACUGAUAGUGAAACUGCUCCUUGAACC	11	3	221	4	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1513099-1513526	Cluster_1974	Pocillopora_meandrina_HIv1___Sc0000005	1513099	1513526	428	90	28	0.022222222222222223	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	30	1	87	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1529876-1530290	Cluster_1975	Pocillopora_meandrina_HIv1___Sc0000005	1529876	1530290	415	79	11	1.0	+	GUACUGACCUAGGGGACGG	33	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1649459-1649875	Cluster_1976	Pocillopora_meandrina_HIv1___Sc0000005	1649459	1649875	417	108	24	0.0	-	GAGGAAAAGAAACUAACA	37	103	0	5	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1674152-1674566	Cluster_1977	Pocillopora_meandrina_HIv1___Sc0000005	1674152	1674566	415	79	2	0.0	-	CGGCUUGAAAAAAAAA	64	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1729004-1729479	Cluster_1978	Pocillopora_meandrina_HIv1___Sc0000005	1729004	1729479	476	601	164	0.051580698835274545	-	UCCUAUGGUCGAUGCCUUCUGAGACAGU	64	20	556	6	4	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1882006-1882421	Cluster_1979	Pocillopora_meandrina_HIv1___Sc0000005	1882006	1882421	416	869	73	0.8757192174913694	+	GAGACUUGAAGCGGC	598	828	26	2	5	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1883318-1883719	Cluster_1980	Pocillopora_meandrina_HIv1___Sc0000005	1883318	1883719	402	207	164	0.0	-	GAUGACUGGGUUGUAACU	7	86	64	24	13	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1897568-1898404	Cluster_1981	Pocillopora_meandrina_HIv1___Sc0000005	1897568	1898404	837	749	445	0.004005340453938585	-	GUGACUGCAGCAGAGU	41	432	200	37	38	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:1899461-1900300	Cluster_1982	Pocillopora_meandrina_HIv1___Sc0000005	1899461	1900300	840	626	379	0.004792332268370607	-	CUCUGGAUCGGAGUGACA	26	267	208	55	37	32	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2220365-2220780	Cluster_1983	Pocillopora_meandrina_HIv1___Sc0000005	2220365	2220780	416	197	19	0.01015228426395939	-	UUGUUCUAAGAUUUGA	47	197	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2281461-2281909	Cluster_1984	Pocillopora_meandrina_HIv1___Sc0000005	2281461	2281909	449	919	184	0.9912948857453754	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	395	61	820	19	9	9	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2310589-2311018	Cluster_1985	Pocillopora_meandrina_HIv1___Sc0000005	2310589	2311018	430	396	162	0.0025252525252525255	-	UACUACGGUUGCUGAAA	37	168	163	20	17	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2352438-2352864	Cluster_1986	Pocillopora_meandrina_HIv1___Sc0000005	2352438	2352864	427	127	46	0.0	-	UUUUCCUGGGCUCGCAGCUUUCUCUGUU	14	1	122	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2391497-2391925	Cluster_1987	Pocillopora_meandrina_HIv1___Sc0000005	2391497	2391925	429	179	72	0.994413407821229	+	AGGACAAACAAGACCUGAAACGGAAAGGA	41	13	153	2	5	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2565707-2566120	Cluster_1988	Pocillopora_meandrina_HIv1___Sc0000005	2565707	2566120	414	76	13	1.0	+	CUCGGCCGUGGAUUGGU	34	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2579073-2579493	Cluster_1989	Pocillopora_meandrina_HIv1___Sc0000005	2579073	2579493	421	153	82	0.8888888888888888	+	UACGUUCGUCUUGAGACAUCUCUGUCUUG	10	3	142	3	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2716945-2717358	Cluster_1990	Pocillopora_meandrina_HIv1___Sc0000005	2716945	2717358	414	107	31	0.8037383177570093	+	UUGCUACGAUCUUCA	25	93	10	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2776669-2777096	Cluster_1991	Pocillopora_meandrina_HIv1___Sc0000005	2776669	2777096	428	519	72	0.9980732177263969	+	AGCCAACGUGACCACAAACAAAGACGAC	136	1	502	4	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2785318-2785746	Cluster_1992	Pocillopora_meandrina_HIv1___Sc0000005	2785318	2785746	429	277	114	0.16606498194945848	-	UGUCUUCACGAAUCUGCAGUUGAAAUUUC	67	13	212	7	15	25	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2843759-2844187	Cluster_1993	Pocillopora_meandrina_HIv1___Sc0000005	2843759	2844187	429	536	65	0.996268656716418	+	AGCCAACGUGACCACAAACAAAGACGAC	141	0	517	7	0	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:2976195-2976612	Cluster_1994	Pocillopora_meandrina_HIv1___Sc0000005	2976195	2976612	418	2430	39	1.0	+	UUAGGGUGCUGUCGGCA	704	2430	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3206370-3206797	Cluster_1995	Pocillopora_meandrina_HIv1___Sc0000005	3206370	3206797	428	89	32	0.02247191011235955	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	33	2	85	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3377636-3378054	Cluster_1996	Pocillopora_meandrina_HIv1___Sc0000005	3377636	3378054	419	152	14	0.993421052631579	+	CAGCGGAACCUUAGGAUCUG	52	140	0	9	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3564984-3565412	Cluster_1997	Pocillopora_meandrina_HIv1___Sc0000005	3564984	3565412	429	1586	127	0.980453972257251	+	UACUAAGUAGGUACCUUCGAGAUGUUUA	377	28	1495	4	4	5	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3590786-3592480	Cluster_1998	Pocillopora_meandrina_HIv1___Sc0000005	3590786	3592480	1695	7925	1483	0.05236593059936909	-	UGAGAAUUCUGGAAUUUAUGACAACUCC	696	121	7290	43	157	143	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3592630-3593852	Cluster_1999	Pocillopora_meandrina_HIv1___Sc0000005	3592630	3593852	1223	4058	639	0.015524889107934944	-	UAAAGACAAUCAACACUCUUAUUAAUAAAG	528	54	3907	26	14	13	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3596796-3597288	Cluster_2000	Pocillopora_meandrina_HIv1___Sc0000005	3596796	3597288	493	527	214	0.0018975332068311196	-	UCUAUUAACUUUUUGGCGUGUCUCUGUAUU	41	15	497	3	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3598205-3598779	Cluster_2001	Pocillopora_meandrina_HIv1___Sc0000005	3598205	3598779	575	934	297	0.18201284796573874	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	131	4	885	2	3	18	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3599005-3600832	Cluster_2002	Pocillopora_meandrina_HIv1___Sc0000005	3599005	3600832	1828	3280	838	0.21707317073170732	.	UACUUCGUUAAGCUUCGUGAGAUCCACA	231	65	2979	28	62	41	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3602850-3603277	Cluster_2003	Pocillopora_meandrina_HIv1___Sc0000005	3602850	3603277	428	85	24	0.011764705882352941	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	24	0	84	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3604132-3604811	Cluster_2004	Pocillopora_meandrina_HIv1___Sc0000005	3604132	3604811	680	269	160	0.08178438661710037	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	24	6	251	5	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3605255-3605666	Cluster_2005	Pocillopora_meandrina_HIv1___Sc0000005	3605255	3605666	412	111	57	0.04504504504504504	-	UAUAACGUAAACUGGUCUCCCUUCGAUUCC	15	3	102	1	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3607300-3607726	Cluster_2006	Pocillopora_meandrina_HIv1___Sc0000005	3607300	3607726	427	275	127	0.007272727272727273	-	UUCAGCUGAGGCUCUUUCAUCUAAUUGU	22	9	254	0	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3711070-3711552	Cluster_2007	Pocillopora_meandrina_HIv1___Sc0000005	3711070	3711552	483	3529	155	0.9705298951544347	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	1301	11	3495	5	6	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3731078-3731507	Cluster_2008	Pocillopora_meandrina_HIv1___Sc0000005	3731078	3731507	430	181	41	1.0	+	UGACUGGUCAACAAAUGGAAAGCGAAUUGU	98	3	172	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3823463-3824086	Cluster_2009	Pocillopora_meandrina_HIv1___Sc0000005	3823463	3824086	624	458	88	0.0851528384279476	-	AAAGGAAUGACAAACAUCUGCCCCAAAGGC	172	9	430	3	1	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3824912-3825341	Cluster_2010	Pocillopora_meandrina_HIv1___Sc0000005	3824912	3825341	430	735	76	0.9673469387755103	+	AUGUAGAGUGUCUUUA	200	276	424	10	1	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3825568-3826027	Cluster_2011	Pocillopora_meandrina_HIv1___Sc0000005	3825568	3826027	460	173	65	0.41040462427745666	.	AAAUCAUGGAGAGGAACUGUUCAUU	30	1	150	7	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3880254-3880902	Cluster_2012	Pocillopora_meandrina_HIv1___Sc0000005	3880254	3880902	649	1104	205	0.9918478260869565	+	UUUGCAGGAAAUGUAAUUGAAAGGAAACA	198	32	1052	1	2	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3881011-3881439	Cluster_2013	Pocillopora_meandrina_HIv1___Sc0000005	3881011	3881439	429	224	67	0.96875	+	UCUUCAGUGUUUGUAACUUCUCUUUUUAC	75	4	219	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3896583-3897262	Cluster_2014	Pocillopora_meandrina_HIv1___Sc0000005	3896583	3897262	680	701	218	0.9871611982881597	+	UGUGAAUUUACUGACCAUCUCGACAUUG	49	10	675	1	8	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3925759-3926827	Cluster_2015	Pocillopora_meandrina_HIv1___Sc0000005	3925759	3926827	1069	1585	628	0.7905362776025237	.	UCUAACGCGUUUGUCUGACAUCCCUUU	131	26	1413	13	19	24	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3928758-3929171	Cluster_2016	Pocillopora_meandrina_HIv1___Sc0000005	3928758	3929171	414	171	86	0.9941520467836257	+	UGUACAAGGUAGAAUUGAAAAUUAAAGACA	12	8	161	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3935142-3935568	Cluster_2017	Pocillopora_meandrina_HIv1___Sc0000005	3935142	3935568	427	143	55	1.0	+	UCUUUGUGCUCUUCUGGAGGUAUGUUC	23	1	139	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3935694-3938334	Cluster_2018	Pocillopora_meandrina_HIv1___Sc0000005	3935694	3938334	2641	8948	1917	0.9938533750558785	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1269	64	8719	12	29	36	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3938637-3939270	Cluster_2019	Pocillopora_meandrina_HIv1___Sc0000005	3938637	3939270	634	380	154	0.9973684210526316	+	UUGGCUAUGUGAACUCUCUCUACUUUGGU	16	11	351	0	1	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3939681-3941351	Cluster_2020	Pocillopora_meandrina_HIv1___Sc0000005	3939681	3941351	1671	3872	992	0.9984504132231405	+	GUCCCGUCGGAGGUGCCA	356	777	3052	10	10	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3946380-3946949	Cluster_2021	Pocillopora_meandrina_HIv1___Sc0000005	3946380	3946949	570	394	135	0.9873096446700508	+	UCAAGAUCUACUACUGUGUGAAAUAAAGCGU	56	12	372	3	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3947796-3948223	Cluster_2022	Pocillopora_meandrina_HIv1___Sc0000005	3947796	3948223	428	228	98	0.9122807017543859	+	UGUAGCAUUCUUUACAAAAGUCUUCAGGA	33	13	213	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3950517-3950939	Cluster_2023	Pocillopora_meandrina_HIv1___Sc0000005	3950517	3950939	423	137	61	0.9854014598540146	+	UGCAAUGCUUUCGACAUCUGACUUGAUUUC	34	5	130	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3954119-3954826	Cluster_2024	Pocillopora_meandrina_HIv1___Sc0000005	3954119	3954826	708	479	172	0.9979123173277662	+	UCAUCCUUGAAAACUGUCUUGAUAAGAGC	83	6	466	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3960917-3961344	Cluster_2025	Pocillopora_meandrina_HIv1___Sc0000005	3960917	3961344	428	214	87	0.9345794392523364	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	83	0	206	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3963107-3963785	Cluster_2026	Pocillopora_meandrina_HIv1___Sc0000005	3963107	3963785	679	442	244	0.8054298642533937	+	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	32	3	376	6	6	11	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3964596-3965021	Cluster_2027	Pocillopora_meandrina_HIv1___Sc0000005	3964596	3965021	426	233	103	0.7510729613733905	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	29	7	211	2	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3981480-3981894	Cluster_2028	Pocillopora_meandrina_HIv1___Sc0000005	3981480	3981894	415	120	10	0.975	+	GUUUCUGUAGUGUCG	107	120	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:3998294-3998765	Cluster_2029	Pocillopora_meandrina_HIv1___Sc0000005	3998294	3998765	472	513	170	0.7582846003898636	.	UGCUCAUCGUUCGAAUGCUUCUCUGAAGCUU	115	3	466	1	3	6	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4004547-4006095	Cluster_2030	Pocillopora_meandrina_HIv1___Sc0000005	4004547	4006095	1549	6469	1092	0.9729479053949606	+	UGCAAGUUGUAUUUCGCUGGAUGGCCC	451	101	6084	45	32	69	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4006299-4006723	Cluster_2031	Pocillopora_meandrina_HIv1___Sc0000005	4006299	4006723	425	236	128	0.9745762711864406	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	33	8	214	2	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4006765-4007192	Cluster_2032	Pocillopora_meandrina_HIv1___Sc0000005	4006765	4007192	428	404	228	0.6782178217821783	.	UGCAUGUGGUAAUUUUUCUCUGCUGGAGUU	17	44	248	41	33	24	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4007731-4008770	Cluster_2033	Pocillopora_meandrina_HIv1___Sc0000005	4007731	4008770	1040	839	362	0.9678188319427891	+	UAACAUCUCUCUUUCCGACUUUAACAGC	53	14	793	1	6	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4008910-4009338	Cluster_2034	Pocillopora_meandrina_HIv1___Sc0000005	4008910	4009338	429	290	119	0.9482758620689655	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	93	8	272	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4009354-4009888	Cluster_2035	Pocillopora_meandrina_HIv1___Sc0000005	4009354	4009888	535	770	341	0.922077922077922	+	UGUGAACCGAAUUUCUGUGAUCGCUCCAGUU	35	19	705	1	9	5	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4010008-4010931	Cluster_2036	Pocillopora_meandrina_HIv1___Sc0000005	4010008	4010931	924	967	474	0.8521199586349535	+	UGAUAAGCCUCUUCGGUCGAGUCCUGGC	31	31	858	2	11	18	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4023907-4024323	Cluster_2037	Pocillopora_meandrina_HIv1___Sc0000005	4023907	4024323	417	121	55	0.9586776859504132	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	17	0	116	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4024433-4024942	Cluster_2038	Pocillopora_meandrina_HIv1___Sc0000005	4024433	4024942	510	398	173	0.9170854271356784	+	UGUAUCUUCUUAGGCCAGCAUGUGUACUGA	54	5	379	2	1	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4024946-4025522	Cluster_2039	Pocillopora_meandrina_HIv1___Sc0000005	4024946	4025522	577	488	235	0.9323770491803278	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	52	4	461	2	4	2	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4025827-4026433	Cluster_2040	Pocillopora_meandrina_HIv1___Sc0000005	4025827	4026433	607	423	183	0.9479905437352246	+	UUAUAUACUUCAUAUGUGGUGUUGACUUG	26	3	408	1	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4027822-4028247	Cluster_2041	Pocillopora_meandrina_HIv1___Sc0000005	4027822	4028247	426	131	63	0.03816793893129771	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	23	1	123	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4030391-4030921	Cluster_2042	Pocillopora_meandrina_HIv1___Sc0000005	4030391	4030921	531	565	235	0.008849557522123894	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	30	2	552	4	1	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4031042-4031471	Cluster_2043	Pocillopora_meandrina_HIv1___Sc0000005	4031042	4031471	430	639	147	0.014084507042253521	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	143	0	628	4	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4135453-4136040	Cluster_2044	Pocillopora_meandrina_HIv1___Sc0000005	4135453	4136040	588	934	336	0.6177730192719486	.	UAUUCUCCUUCUCGGUCGACUGAGGUUG	50	32	740	16	25	61	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4273351-4273768	Cluster_2045	Pocillopora_meandrina_HIv1___Sc0000005	4273351	4273768	418	275	192	0.9927272727272727	+	GUAUAAAGGAGAGGAUAAGACU	14	82	83	16	40	29	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4315138-4315565	Cluster_2046	Pocillopora_meandrina_HIv1___Sc0000005	4315138	4315565	428	304	82	0.2565789473684211	.	UUGGAACGUGUUGCUGAACGCUUGUUGC	86	7	275	1	3	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4318507-4319208	Cluster_2047	Pocillopora_meandrina_HIv1___Sc0000005	4318507	4319208	702	287	137	0.9407665505226481	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	31	3	273	3	4	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4320438-4320865	Cluster_2048	Pocillopora_meandrina_HIv1___Sc0000005	4320438	4320865	428	222	124	0.8333333333333334	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	19	4	198	0	2	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4377759-4378183	Cluster_2049	Pocillopora_meandrina_HIv1___Sc0000005	4377759	4378183	425	225	83	1.0	+	AUGAUGAGCGAUUUAUCUCUGACAUUU	35	60	113	14	12	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4402426-4402843	Cluster_2050	Pocillopora_meandrina_HIv1___Sc0000005	4402426	4402843	418	232	14	1.0	+	UUCCCGGCUGAUGCACCA	49	232	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4473566-4473993	Cluster_2051	Pocillopora_meandrina_HIv1___Sc0000005	4473566	4473993	428	180	78	0.011111111111111112	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	26	1	169	0	0	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4512272-4512700	Cluster_2052	Pocillopora_meandrina_HIv1___Sc0000005	4512272	4512700	429	1303	90	1.0	+	AAUUGUUAAAUGUAACGGGCGUGCUGUU	399	7	1234	1	8	17	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4525551-4525980	Cluster_2053	Pocillopora_meandrina_HIv1___Sc0000005	4525551	4525980	430	306	34	0.0	-	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	136	0	306	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4527011-4527525	Cluster_2054	Pocillopora_meandrina_HIv1___Sc0000005	4527011	4527525	515	3237	361	0.01606425702811245	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGC	596	63	2948	14	34	25	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4539470-4539906	Cluster_2055	Pocillopora_meandrina_HIv1___Sc0000005	4539470	4539906	437	311	86	0.012861736334405145	-	UGAAUCUUGACAGUUGGGUUUACUUGUGA	64	4	298	1	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4615282-4615696	Cluster_2056	Pocillopora_meandrina_HIv1___Sc0000005	4615282	4615696	415	140	9	0.0	-	AUCCAGCGAUCGCGG	125	140	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4663510-4663925	Cluster_2057	Pocillopora_meandrina_HIv1___Sc0000005	4663510	4663925	416	135	7	0.9925925925925926	+	GUGGUGGACUGCUUGU	104	135	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4734280-4734714	Cluster_2058	Pocillopora_meandrina_HIv1___Sc0000005	4734280	4734714	435	236	135	0.4110169491525424	.	UAGUGUUUGAAUUGUUGGAAUAAAUGGUC	15	60	145	21	7	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4771508-4771922	Cluster_2059	Pocillopora_meandrina_HIv1___Sc0000005	4771508	4771922	415	351	12	1.0	+	GAAUCGGCCGUGGGU	326	350	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4903620-4904044	Cluster_2060	Pocillopora_meandrina_HIv1___Sc0000005	4903620	4904044	425	265	17	0.9622641509433962	+	UCGCCAACUUCUAUGAAAUCUGAGU	192	4	244	0	11	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4922758-4923269	Cluster_2061	Pocillopora_meandrina_HIv1___Sc0000005	4922758	4923269	512	2691	236	0.9847640282422891	+	UCUUUCAAAUCUAUUGUGCAGGUCUCGU	643	34	2629	3	0	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4923738-4924295	Cluster_2062	Pocillopora_meandrina_HIv1___Sc0000005	4923738	4924295	558	1481	373	0.5084402430790007	.	UGCUAUUCAUGAAACCCAUUAGCUUGUCGGG	118	15	1329	7	20	21	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:4924542-4925210	Cluster_2063	Pocillopora_meandrina_HIv1___Sc0000005	4924542	4925210	669	9789	1113	0.837368474818674	+	UUCUCUGCAUUGCUCGAUACCCUAGAUA	1467	160	8293	60	263	576	437	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5081968-5082395	Cluster_2064	Pocillopora_meandrina_HIv1___Sc0000005	5081968	5082395	428	112	14	1.0	+	AUGUAGUGAAACUGAUGGCGGAAUUAAAC	44	5	104	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5338814-5339222	Cluster_2065	Pocillopora_meandrina_HIv1___Sc0000005	5338814	5339222	409	134	107	1.0	+	UCACUGAUGGAAAGACGAGCUCGA	3	43	40	10	12	14	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5359017-5359445	Cluster_2066	Pocillopora_meandrina_HIv1___Sc0000005	5359017	5359445	429	223	122	0.8161434977578476	+	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	16	4	209	0	0	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5377749-5378165	Cluster_2067	Pocillopora_meandrina_HIv1___Sc0000005	5377749	5378165	417	538	28	0.966542750929368	+	AAUCGGCCGUGGAUC	163	531	6	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5418990-5419564	Cluster_2068	Pocillopora_meandrina_HIv1___Sc0000005	5418990	5419564	575	916	278	0.17903930131004367	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	117	11	843	1	5	22	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5419926-5420338	Cluster_2069	Pocillopora_meandrina_HIv1___Sc0000005	5419926	5420338	413	247	139	0.11336032388663968	-	UGAACUUAACGACACCUAGAUCUGCACAAGC	14	16	210	2	5	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5420641-5421617	Cluster_2070	Pocillopora_meandrina_HIv1___Sc0000005	5420641	5421617	977	1291	311	0.16266460108443068	-	UAACUCCGAUCCGAUGACCUAGAAAGUC	154	10	1228	1	1	12	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5422009-5422690	Cluster_2071	Pocillopora_meandrina_HIv1___Sc0000005	5422009	5422690	682	290	148	0.11724137931034483	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	34	3	274	1	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5464207-5464623	Cluster_2072	Pocillopora_meandrina_HIv1___Sc0000005	5464207	5464623	417	109	10	0.963302752293578	+	UCUCUCAAGGGGCUCCA	47	107	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5472880-5473521	Cluster_2073	Pocillopora_meandrina_HIv1___Sc0000005	5472880	5473521	642	430	147	0.8860465116279069	+	UACCGUAGAACUUUCCAGAACAUUUCAUUA	67	21	363	8	7	9	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5727565-5728047	Cluster_2074	Pocillopora_meandrina_HIv1___Sc0000005	5727565	5728047	483	429	247	0.34965034965034963	.	AUGUUAAACAACAACUGAACAGUCUAAGC	18	63	284	59	8	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5740802-5741275	Cluster_2075	Pocillopora_meandrina_HIv1___Sc0000005	5740802	5741275	474	1051	349	1.0	+	AUGCAUUUGUUGAGUUCAGGU	121	250	408	228	76	46	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5741785-5742213	Cluster_2076	Pocillopora_meandrina_HIv1___Sc0000005	5741785	5742213	429	440	197	1.0	+	GAAUGCUAAAUGAACUGAUGAGACGU	33	52	299	14	16	21	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5810483-5811004	Cluster_2077	Pocillopora_meandrina_HIv1___Sc0000005	5810483	5811004	522	11089	1409	0.0015330507710343583	-	CCUUUCGGCGGGGCU	3548	7961	1811	371	377	278	291	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5811618-5812183	Cluster_2078	Pocillopora_meandrina_HIv1___Sc0000005	5811618	5812183	566	82908	5404	0.9999276306267187	+	CGUUCGCGCUCGUCCCCUU	8192	37670	21948	7396	8846	3791	3257	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5842221-5842649	Cluster_2079	Pocillopora_meandrina_HIv1___Sc0000005	5842221	5842649	429	97	26	0.020618556701030927	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	65	1	94	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5843650-5844067	Cluster_2080	Pocillopora_meandrina_HIv1___Sc0000005	5843650	5844067	418	242	120	0.9958677685950413	+	AACCUUCAACUUUUAUUUUACAAUUU	21	34	117	17	24	24	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:5915220-5916129	Cluster_2081	Pocillopora_meandrina_HIv1___Sc0000005	5915220	5916129	910	8505	1181	0.9998824221046443	+	GUUGGGAUUCUGCAUGUGCUGAGCUA	2137	1239	5952	264	328	333	389	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6246291-6246717	Cluster_2082	Pocillopora_meandrina_HIv1___Sc0000005	6246291	6246717	427	220	133	0.8454545454545455	+	UGAGUCGAGGUUAUUCACAAUACGAGC	35	4	188	1	1	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6246955-6247393	Cluster_2083	Pocillopora_meandrina_HIv1___Sc0000005	6246955	6247393	439	699	201	0.9384835479256081	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	87	3	670	1	0	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6264822-6265314	Cluster_2084	Pocillopora_meandrina_HIv1___Sc0000005	6264822	6265314	493	403	249	0.7667493796526055	.	UUAGCCCAUUUCUCCCAGAAGAAUUCUC	9	10	321	5	6	20	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6265385-6266060	Cluster_2085	Pocillopora_meandrina_HIv1___Sc0000005	6265385	6266060	676	7974	560	0.9959869576122398	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2141	10	7832	5	52	38	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6355960-6356378	Cluster_2086	Pocillopora_meandrina_HIv1___Sc0000005	6355960	6356378	419	398	57	0.010050251256281407	-	GUGUGUGUCUCUCUGU	119	377	3	16	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6408877-6409293	Cluster_2087	Pocillopora_meandrina_HIv1___Sc0000005	6408877	6409293	417	975	13	0.9948717948717949	+	CGGCCUGAAAAAAAAA	831	974	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6605546-6605973	Cluster_2088	Pocillopora_meandrina_HIv1___Sc0000005	6605546	6605973	428	189	86	0.9841269841269841	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	23	2	175	0	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:6891562-6891988	Cluster_2089	Pocillopora_meandrina_HIv1___Sc0000005	6891562	6891988	427	173	52	1.0	+	ACAGAUCGGAUCACAGAUCAUGUGAGC	40	31	139	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7006922-7007700	Cluster_2090	Pocillopora_meandrina_HIv1___Sc0000005	7006922	7007700	779	650	265	0.9461538461538461	+	UGAUCUGGAAUUCCGAAUCUGGAAAAUGCA	33	7	622	4	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7007995-7008971	Cluster_2091	Pocillopora_meandrina_HIv1___Sc0000005	7007995	7008971	977	1110	292	0.9162162162162162	+	UUAACUCCGAUCCGAUGACCUAGAAAGU	137	10	1062	3	2	10	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7009057-7009690	Cluster_2092	Pocillopora_meandrina_HIv1___Sc0000005	7009057	7009690	634	972	389	0.6810699588477366	.	GGAGAAUAUAAGAUUA	92	128	739	10	51	9	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7010048-7010622	Cluster_2093	Pocillopora_meandrina_HIv1___Sc0000005	7010048	7010622	575	934	293	0.8340471092077087	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	120	6	871	4	5	20	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7172756-7173691	Cluster_2094	Pocillopora_meandrina_HIv1___Sc0000005	7172756	7173691	936	1357	386	0.027266028002947678	-	UGUUAAGUGCACUCUUCGUCUUGUUGAA	125	9	1319	13	1	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7174561-7174987	Cluster_2095	Pocillopora_meandrina_HIv1___Sc0000005	7174561	7174987	427	161	89	0.16770186335403728	-	UCAGACUAGCAACAUGAUCUUCGGUGA	19	1	146	3	0	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7175000-7175423	Cluster_2096	Pocillopora_meandrina_HIv1___Sc0000005	7175000	7175423	424	209	90	0.014354066985645933	-	UCAAAAGCUGCCGAUAAAUCUAAA	43	0	153	0	1	6	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7179152-7179577	Cluster_2097	Pocillopora_meandrina_HIv1___Sc0000005	7179152	7179577	426	168	86	0.9107142857142857	+	UGUGAUUGUCUUCAAACUGACGUAGGG	13	2	151	6	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7180225-7181201	Cluster_2098	Pocillopora_meandrina_HIv1___Sc0000005	7180225	7181201	977	1227	326	0.9136104319478403	+	UAACUCCGAUCCGAUGACCUAGAAAGUC	146	23	1162	1	8	5	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7181500-7181920	Cluster_2099	Pocillopora_meandrina_HIv1___Sc0000005	7181500	7181920	421	242	141	0.8553719008264463	+	UGAACUUAACGACACCUAGAUCUGCACAAGC	19	9	197	2	9	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7182278-7182852	Cluster_2100	Pocillopora_meandrina_HIv1___Sc0000005	7182278	7182852	575	933	266	0.8435155412647374	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	116	4	891	2	1	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7308193-7308623	Cluster_2101	Pocillopora_meandrina_HIv1___Sc0000005	7308193	7308623	431	398	150	0.005025125628140704	-	UACAAAGCUCUCACGAAUUCACAAACAGA	48	1	392	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7309082-7310214	Cluster_2102	Pocillopora_meandrina_HIv1___Sc0000005	7309082	7310214	1133	1330	537	0.010526315789473684	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	84	14	1280	4	7	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7310337-7311215	Cluster_2103	Pocillopora_meandrina_HIv1___Sc0000005	7310337	7311215	879	862	382	0.01160092807424594	-	UGCUGAAACGAUUUUGACAGGUUGUCA	54	10	819	3	4	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7311622-7312074	Cluster_2104	Pocillopora_meandrina_HIv1___Sc0000005	7311622	7312074	453	943	292	0.005302226935312832	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	115	6	932	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:7971124-7972081	Cluster_2105	Pocillopora_meandrina_HIv1___Sc0000005	7971124	7972081	958	1310	206	0.1366412213740458	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	439	29	1242	2	4	12	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8244558-8244974	Cluster_2106	Pocillopora_meandrina_HIv1___Sc0000005	8244558	8244974	417	188	7	1.0	+	GAUGGAUGGAGACCGCG	97	188	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8311363-8311780	Cluster_2107	Pocillopora_meandrina_HIv1___Sc0000005	8311363	8311780	418	264	188	0.9962121212121212	+	CUCUGGAAGUUGAACCGAGCGAUA	8	82	113	17	17	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8311940-8312362	Cluster_2108	Pocillopora_meandrina_HIv1___Sc0000005	8311940	8312362	423	321	253	0.9968847352024922	+	UGAAGUAGAGCCCAGCGACU	7	118	116	17	21	24	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8312571-8312986	Cluster_2109	Pocillopora_meandrina_HIv1___Sc0000005	8312571	8312986	416	288	214	1.0	+	UCUUCAUUUGGUGUUGCGUCUGAGA	7	75	118	21	27	26	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8456348-8456887	Cluster_2110	Pocillopora_meandrina_HIv1___Sc0000005	8456348	8456887	540	2610	428	0.0007662835249042146	-	GGUUAUAGGACAAUGCUACAUUC	745	584	786	63	97	929	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:8917444-8917859	Cluster_2111	Pocillopora_meandrina_HIv1___Sc0000005	8917444	8917859	416	153	13	0.9869281045751634	+	UCGGAAGUGGGGGUUC	60	151	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9057453-9058049	Cluster_2112	Pocillopora_meandrina_HIv1___Sc0000005	9057453	9058049	597	5645	506	0.9973427812223207	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	880	22	5581	4	4	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9143137-9143552	Cluster_2113	Pocillopora_meandrina_HIv1___Sc0000005	9143137	9143552	416	159	19	0.025157232704402517	-	UGUAUCCCAACCAAGU	140	145	9	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9204698-9205112	Cluster_2114	Pocillopora_meandrina_HIv1___Sc0000005	9204698	9205112	415	1531	13	0.999346832135859	+	CUUUCCGAGGUCGCA	1436	1528	2	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9285829-9286334	Cluster_2115	Pocillopora_meandrina_HIv1___Sc0000005	9285829	9286334	506	596	234	0.2684563758389262	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	74	11	532	5	5	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9287286-9288359	Cluster_2116	Pocillopora_meandrina_HIv1___Sc0000005	9287286	9288359	1074	2594	799	0.22397841171935234	.	UUAUUGCCGAACUGAAUGCUGCUC	129	77	2101	11	43	52	310	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:9609413-9609842	Cluster_2117	Pocillopora_meandrina_HIv1___Sc0000005	9609413	9609842	430	350	61	0.9971428571428571	+	UCUUGAAUCACGGUGCUUUUGGAUGUGUC	107	11	335	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10117919-10118345	Cluster_2118	Pocillopora_meandrina_HIv1___Sc0000005	10117919	10118345	427	119	43	0.9831932773109243	+	UGAGUUGGUAAAAUCUGUUCAGACAUCACA	47	18	91	2	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10165111-10165527	Cluster_2119	Pocillopora_meandrina_HIv1___Sc0000005	10165111	10165527	417	311	14	0.003215434083601286	-	ACUGCUGCCGGUCGUUA	175	311	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10301510-10301943	Cluster_2120	Pocillopora_meandrina_HIv1___Sc0000005	10301510	10301943	434	264	78	0.21212121212121213	.	UUCAUGACUUCCAAACAUUUCUUUGUCGA	45	4	260	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10303106-10303644	Cluster_2121	Pocillopora_meandrina_HIv1___Sc0000005	10303106	10303644	539	405	149	0.24938271604938272	.	UGUAACUUUGAGCUUCUUUUUUGCAGGA	127	7	374	1	4	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10337706-10338123	Cluster_2122	Pocillopora_meandrina_HIv1___Sc0000005	10337706	10338123	418	432	37	1.0	+	UCGAACUCGACCCUGA	90	431	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10385319-10385743	Cluster_2123	Pocillopora_meandrina_HIv1___Sc0000005	10385319	10385743	425	57599	366	0.999965277174951	+	UCAGGGAUUGUGGUGAGUUAGUU	21438	10657	124	1392	10035	31505	3886	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10461462-10461961	Cluster_2124	Pocillopora_meandrina_HIv1___Sc0000005	10461462	10461961	500	404	296	0.9900990099009901	+	CACUGUGGCAACCAGUGAACGACUGCA	5	122	137	35	26	41	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10543052-10543521	Cluster_2125	Pocillopora_meandrina_HIv1___Sc0000005	10543052	10543521	470	2586	671	0.9965197215777262	+	CCUGAUGUGGAACGGCU	242	1928	253	176	104	75	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10597619-10598036	Cluster_2126	Pocillopora_meandrina_HIv1___Sc0000005	10597619	10598036	418	150	16	0.03333333333333333	-	GACUUGAAGCGGCUGGAU	53	149	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10602442-10602865	Cluster_2127	Pocillopora_meandrina_HIv1___Sc0000005	10602442	10602865	424	140	36	0.35714285714285715	.	CAGAUUCGGUAUAACUUCACAGCU	31	11	4	1	12	44	68	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10816891-10817313	Cluster_2128	Pocillopora_meandrina_HIv1___Sc0000005	10816891	10817313	423	523	73	0.0019120458891013384	-	UGGCAUAAGGGCAGCCACCCCUU	209	71	4	14	12	387	35	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10822550-10822977	Cluster_2129	Pocillopora_meandrina_HIv1___Sc0000005	10822550	10822977	428	1288	98	1.0	+	UUUGGCAUCUGAGAGUC	305	752	364	39	52	51	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10823796-10824278	Cluster_2130	Pocillopora_meandrina_HIv1___Sc0000005	10823796	10824278	483	4154	646	1.0	+	UCUCUGUGAUGAAACAUCU	266	1769	1126	326	311	305	317	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10832517-10832947	Cluster_2131	Pocillopora_meandrina_HIv1___Sc0000005	10832517	10832947	431	1688	334	1.0	+	CAGCUUGGCUGAAGUCUGAUGCACA	232	263	574	131	125	290	305	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10833541-10833970	Cluster_2132	Pocillopora_meandrina_HIv1___Sc0000005	10833541	10833970	430	461	221	1.0	+	GUUGAUCACAAACUCAGCUUGGCU	21	162	135	54	32	28	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10841148-10841565	Cluster_2133	Pocillopora_meandrina_HIv1___Sc0000005	10841148	10841565	418	134	90	0.8432835820895522	+	UAUUGCUGAACAGACGCACG	10	53	29	16	24	10	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:10909091-10909513	Cluster_2134	Pocillopora_meandrina_HIv1___Sc0000005	10909091	10909513	423	468	63	0.9957264957264957	+	UACUGCUAUUCUUCUUCAGGC	104	58	11	135	124	131	9	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11109438-11110604	Cluster_2135	Pocillopora_meandrina_HIv1___Sc0000005	11109438	11110604	1167	1367	546	0.12289685442574981	-	UACAAUAACCUCUGAUUUCACUAAAUG	64	13	1252	8	14	36	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11110702-11111212	Cluster_2136	Pocillopora_meandrina_HIv1___Sc0000005	11110702	11111212	511	838	369	0.2458233890214797	.	UGGACUCUAUCCUUGCCUUGAAUGCCAUGAU	23	19	713	6	12	41	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11111466-11112721	Cluster_2137	Pocillopora_meandrina_HIv1___Sc0000005	11111466	11112721	1256	1682	711	0.18906064209274673	-	CUUUCCGAGGUCGCGA	99	191	1401	16	11	17	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11112920-11114830	Cluster_2138	Pocillopora_meandrina_HIv1___Sc0000005	11112920	11114830	1911	3672	1111	0.05991285403050109	-	UGUACAACCAUCCGAUACUCUUGU	669	32	2479	18	15	63	1065	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11114900-11115327	Cluster_2139	Pocillopora_meandrina_HIv1___Sc0000005	11114900	11115327	428	348	209	0.15229885057471265	-	UGAUCAUGUACGGACCGAAGUAAUCCAC	27	3	312	2	4	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11115661-11116088	Cluster_2140	Pocillopora_meandrina_HIv1___Sc0000005	11115661	11116088	428	342	202	0.18421052631578946	-	UGAUUCCGCGCUUAUGACUCGUCCCAUC	22	6	291	2	7	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11116246-11116697	Cluster_2141	Pocillopora_meandrina_HIv1___Sc0000005	11116246	11116697	452	229	86	0.013100436681222707	-	UGAACACGCGUACUUGUAAUUAUGAAAUG	21	2	222	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11256775-11257253	Cluster_2142	Pocillopora_meandrina_HIv1___Sc0000005	11256775	11257253	479	646	177	0.9520123839009288	+	UUAUAAGGAUCUCAAGGCGAAUAAAGCA	96	40	540	21	12	5	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11260734-11260823	Cluster_2143	Pocillopora_meandrina_HIv1___Sc0000005	11260734	11260823	90	30574	440	1.0	+	UCAGGUUAGGAGCAUGGUAUAGA	11130	11000	134	1181	4392	13194	673	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000005:11261356-11261449	Cluster_2144	Pocillopora_meandrina_HIv1___Sc0000005	11261356	11261449	94	11334	326	1.0	+	UAUGCCAGGUCCUAACUUGAAA	3008	2705	37	1849	4014	2246	483	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000005:11307792-11308261	Cluster_2145	Pocillopora_meandrina_HIv1___Sc0000005	11307792	11308261	470	3965	526	0.0017654476670870113	-	GAAGUGUUGAUGUUGGAAUUUAUGAAGGCU	286	370	2330	141	562	428	134	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11485270-11485687	Cluster_2146	Pocillopora_meandrina_HIv1___Sc0000005	11485270	11485687	418	202	158	0.0049504950495049506	-	GAGGAGCGAGACAGAAGACU	6	85	55	18	19	20	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11518650-11519090	Cluster_2147	Pocillopora_meandrina_HIv1___Sc0000005	11518650	11519090	441	320	158	0.003125	-	UUUCCGCUUAUUAUCUGAUGAU	18	109	51	39	51	33	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11520396-11520872	Cluster_2148	Pocillopora_meandrina_HIv1___Sc0000005	11520396	11520872	477	262	120	0.003816793893129771	-	ACCAAGUGAUGAGUUUGAAU	17	131	57	40	18	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11564515-11564935	Cluster_2149	Pocillopora_meandrina_HIv1___Sc0000005	11564515	11564935	421	109	52	1.0	+	UAUUUUUAAUCUCUUGCAUACCCUGUUGG	20	1	108	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11705949-11706365	Cluster_2150	Pocillopora_meandrina_HIv1___Sc0000005	11705949	11706365	417	445	30	0.0022471910112359553	-	AGUGUACUCUUAACU	109	435	6	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11883963-11884509	Cluster_2151	Pocillopora_meandrina_HIv1___Sc0000005	11883963	11884509	547	443	164	0.9977426636568849	+	UAGCAUUCCAUGUGUACAGUUGACUUUUGAA	49	57	311	14	9	29	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:11901631-11902057	Cluster_2152	Pocillopora_meandrina_HIv1___Sc0000005	11901631	11902057	427	93	26	1.0	+	CCAGAGGAAAAGAAACAACAUGCCACAGA	23	4	85	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12069982-12070397	Cluster_2153	Pocillopora_meandrina_HIv1___Sc0000005	12069982	12070397	416	325	16	1.0	+	GCGGAUGUGGCGGAAU	198	321	3	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12095434-12095848	Cluster_2154	Pocillopora_meandrina_HIv1___Sc0000005	12095434	12095848	415	103	6	0.009708737864077669	-	GAUGAACCGAACGCA	96	100	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12166117-12166543	Cluster_2155	Pocillopora_meandrina_HIv1___Sc0000005	12166117	12166543	427	234	166	0.9572649572649573	+	UGAGGUGGGCAAGCGUACUUCGAGAUC	8	119	59	13	18	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12169310-12169763	Cluster_2156	Pocillopora_meandrina_HIv1___Sc0000005	12169310	12169763	454	283	224	0.9964664310954063	+	GAAAGAGAUUGACGAGGCU	6	96	122	21	15	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12170231-12172359	Cluster_2157	Pocillopora_meandrina_HIv1___Sc0000005	12170231	12172359	2129	3927	2526	0.9971988795518207	+	AUCAUGGAUGCCGCA	26	1645	1079	323	320	291	269	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12225565-12225979	Cluster_2158	Pocillopora_meandrina_HIv1___Sc0000005	12225565	12225979	415	129	9	0.015503875968992248	-	UGCCUGAACAUUUUU	81	129	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12263787-12264201	Cluster_2159	Pocillopora_meandrina_HIv1___Sc0000005	12263787	12264201	415	136	12	0.007352941176470588	-	CGAGCUGUUCUUCCC	115	136	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12311971-12312386	Cluster_2160	Pocillopora_meandrina_HIv1___Sc0000005	12311971	12312386	416	149	7	1.0	+	CUUGAAGCGGUAGGCU	109	149	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12416089-12416515	Cluster_2161	Pocillopora_meandrina_HIv1___Sc0000005	12416089	12416515	427	182	78	0.9945054945054945	+	UGAUUGACGUACGGUAUUUGAGACGC	17	2	171	1	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12421588-12422017	Cluster_2162	Pocillopora_meandrina_HIv1___Sc0000005	12421588	12422017	430	204	32	0.9313725490196079	+	CAAUGUCUUAGUAGAAAAACGUACACCUGU	78	7	183	2	8	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12614500-12617140	Cluster_2163	Pocillopora_meandrina_HIv1___Sc0000005	12614500	12617140	2641	8811	1869	0.008285098172738621	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1271	50	8574	11	23	35	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12632974-12633473	Cluster_2164	Pocillopora_meandrina_HIv1___Sc0000005	12632974	12633473	500	884	326	0.996606334841629	+	GCAGUGUUAGCAAGGUGGGCUGAGGGAA	82	392	299	53	37	37	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12689818-12690339	Cluster_2165	Pocillopora_meandrina_HIv1___Sc0000005	12689818	12690339	522	8135	1397	0.9893054701905347	+	CCUUGCGGCGGGGCC	655	3175	3277	424	466	393	400	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12718037-12718462	Cluster_2166	Pocillopora_meandrina_HIv1___Sc0000005	12718037	12718462	426	179	55	0.0	-	AUGCAGUCUUACUCUUCUUGUCAACA	62	11	125	10	21	11	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12879314-12879727	Cluster_2167	Pocillopora_meandrina_HIv1___Sc0000005	12879314	12879727	414	135	103	0.9925925925925926	+	CCAAGCAGAAUUGUCUGGAGAACAGUGAGA	5	21	65	10	12	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12880229-12880653	Cluster_2168	Pocillopora_meandrina_HIv1___Sc0000005	12880229	12880653	425	239	140	1.0	+	GUACUGUGUGCUUGGUAGACUGUCC	15	92	78	15	16	21	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12881759-12882202	Cluster_2169	Pocillopora_meandrina_HIv1___Sc0000005	12881759	12882202	444	294	177	0.9965986394557823	+	GAAGGCCUUGCAGAACA	9	116	73	25	35	24	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12952941-12953368	Cluster_2170	Pocillopora_meandrina_HIv1___Sc0000005	12952941	12953368	428	85	17	0.011764705882352941	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	37	0	83	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:12980349-12980834	Cluster_2171	Pocillopora_meandrina_HIv1___Sc0000005	12980349	12980834	486	1939	241	0.998452810727179	+	ACUUGAUGGUGAAAGUCUCUUUUUCUGAUU	648	102	1674	14	25	41	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13249315-13249743	Cluster_2172	Pocillopora_meandrina_HIv1___Sc0000005	13249315	13249743	429	146	38	0.00684931506849315	-	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	31	4	140	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13301595-13302016	Cluster_2173	Pocillopora_meandrina_HIv1___Sc0000005	13301595	13302016	422	241	27	0.0	-	UGAAGAUCUUUGCUCUGAAGU	110	44	0	113	57	26	1	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13318059-13318545	Cluster_2174	Pocillopora_meandrina_HIv1___Sc0000005	13318059	13318545	487	6122	687	0.0003266906239790918	-	UGAUGUUGAUUGUCUCUUUCUGAUUCCA	947	503	3473	516	255	315	1060	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13760603-13761092	Cluster_2175	Pocillopora_meandrina_HIv1___Sc0000005	13760603	13761092	490	2150	487	1.0	+	AUGGAAUGAUGGAUU	107	602	978	83	125	155	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13781493-13781939	Cluster_2176	Pocillopora_meandrina_HIv1___Sc0000005	13781493	13781939	447	695	95	0.33093525179856115	.	UCGUUUAGAUCAGAGAUCACCUCAACU	229	1	678	1	2	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13806200-13806772	Cluster_2177	Pocillopora_meandrina_HIv1___Sc0000005	13806200	13806772	573	516	56	0.001937984496124031	-	AUCCCACUUCUGACACCA	150	515	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13832568-13833012	Cluster_2178	Pocillopora_meandrina_HIv1___Sc0000005	13832568	13833012	445	9337	77	0.9686194709221377	+	AACUUUUGACGGUGGAUCA	8547	9329	7	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000005:13884196-13884612	Cluster_2179	Pocillopora_meandrina_HIv1___Sc0000005	13884196	13884612	417	394	10	0.0	-	GAUGGAUGGAGACUGCC	381	386	7	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:79291-79707	Cluster_2180	Pocillopora_meandrina_HIv1___Sc0000006	79291	79707	417	3033	37	0.002967359050445104	-	GAGACUUGAAGCGGUC	1614	3030	2	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:89977-90391	Cluster_2181	Pocillopora_meandrina_HIv1___Sc0000006	89977	90391	415	76	14	1.0	+	UAACUAUGACUCUCU	22	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:110769-111620	Cluster_2182	Pocillopora_meandrina_HIv1___Sc0000006	110769	111620	852	3160	612	0.12848101265822784	-	UCCUUUCCAAUCUGUUAAUGUUUCUAGC	896	52	2902	15	10	33	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:119717-120119	Cluster_2183	Pocillopora_meandrina_HIv1___Sc0000006	119717	120119	403	217	89	0.30414746543778803	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	32	3	198	2	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:149399-149826	Cluster_2184	Pocillopora_meandrina_HIv1___Sc0000006	149399	149826	428	445	69	0.02247191011235955	-	AGGUAUAGGUUACUCAAGAUUAAUUGAU	205	3	436	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:261845-262259	Cluster_2185	Pocillopora_meandrina_HIv1___Sc0000006	261845	262259	415	89	5	0.0	-	ACAACUUUUGACGGA	82	89	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:471610-472156	Cluster_2186	Pocillopora_meandrina_HIv1___Sc0000006	471610	472156	547	1180	396	0.4457627118644068	.	AACACUACUACCGUGAGACUGAAG	74	31	884	18	28	76	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:475228-475648	Cluster_2187	Pocillopora_meandrina_HIv1___Sc0000006	475228	475648	421	214	134	0.06542056074766354	-	UGCGUCUUGGUCUUGAUGGUGAGCAUAG	8	21	179	3	5	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:484472-484900	Cluster_2188	Pocillopora_meandrina_HIv1___Sc0000006	484472	484900	429	168	70	0.0	-	UUCUGUAGCAGCCGAUGUCCUGGGAGAUGGC	23	1	157	1	1	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:490464-490892	Cluster_2189	Pocillopora_meandrina_HIv1___Sc0000006	490464	490892	429	183	54	0.01092896174863388	-	UCAAAGAACUCUUUCGACUGCUCAUGGGC	66	14	166	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:495473-496303	Cluster_2190	Pocillopora_meandrina_HIv1___Sc0000006	495473	496303	831	546	215	0.9523809523809523	+	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	49	0	537	3	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:497239-497707	Cluster_2191	Pocillopora_meandrina_HIv1___Sc0000006	497239	497707	469	701	258	0.10984308131241084	-	UGUAUACCAAAUGAUGACUCAAGUCGACGU	105	9	639	4	7	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:497822-498249	Cluster_2192	Pocillopora_meandrina_HIv1___Sc0000006	497822	498249	428	227	122	0.2290748898678414	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	16	1	214	1	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:499995-500445	Cluster_2193	Pocillopora_meandrina_HIv1___Sc0000006	499995	500445	451	440	98	0.022727272727272728	-	UCUAGAUGGAUAUACUCGGAUAACUUACU	107	9	417	3	0	0	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:503729-504277	Cluster_2194	Pocillopora_meandrina_HIv1___Sc0000006	503729	504277	549	1158	179	0.0025906735751295338	-	UGAUUGAGUCAAAGACAAUGUGGGAGUUA	221	5	1118	3	9	14	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:506791-507628	Cluster_2195	Pocillopora_meandrina_HIv1___Sc0000006	506791	507628	838	972	308	0.03909465020576132	-	UAAUGACUUCAGAGUAGACAGAGACGGU	86	9	934	6	4	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:507698-508124	Cluster_2196	Pocillopora_meandrina_HIv1___Sc0000006	507698	508124	427	326	95	0.06441717791411043	-	UGUACAAGGUCGAAAGAAUCCAGGAUA	157	6	302	1	0	0	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:508498-508924	Cluster_2197	Pocillopora_meandrina_HIv1___Sc0000006	508498	508924	427	156	88	0.14102564102564102	-	UCAGACUAGCAACAUGAUCUUCGGUGA	19	0	142	2	1	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:508937-509360	Cluster_2198	Pocillopora_meandrina_HIv1___Sc0000006	508937	509360	424	207	92	0.028985507246376812	-	UCAAAAGCUGCCGAUAAAUCUAAA	44	3	141	3	2	2	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:513018-513961	Cluster_2199	Pocillopora_meandrina_HIv1___Sc0000006	513018	513961	944	43580	672	9.178522257916475e-05	-	UUCAAUGUGAAAAGUCUACUUAGGAUGAGU	27173	27	43504	5	9	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:517130-517558	Cluster_2200	Pocillopora_meandrina_HIv1___Sc0000006	517130	517558	429	450	89	0.0	-	UUGAACGUCACUGUCUAUAAGCAAUGCAA	45	0	425	1	7	14	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:520034-520463	Cluster_2201	Pocillopora_meandrina_HIv1___Sc0000006	520034	520463	430	252	98	0.003968253968253968	-	UGGAAACUAUCGUAUGAAAAGAAAUCAAAGU	46	0	247	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:523336-523765	Cluster_2202	Pocillopora_meandrina_HIv1___Sc0000006	523336	523765	430	282	131	0.0	-	UGAGAAGAUCUUUUAUUCGUCGCGGCCAUU	49	1	275	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:524628-525055	Cluster_2203	Pocillopora_meandrina_HIv1___Sc0000006	524628	525055	428	288	128	0.0	-	UGGGUGUAGUGCUGAAUACUGCAGCAUU	66	5	274	0	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:525192-525606	Cluster_2204	Pocillopora_meandrina_HIv1___Sc0000006	525192	525606	415	222	130	0.0	-	UAAGUUACACUGAUUUAACUCCUUUACA	12	2	213	0	3	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:525830-526260	Cluster_2205	Pocillopora_meandrina_HIv1___Sc0000006	525830	526260	431	366	151	0.0	-	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	41	5	352	3	5	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:526275-526840	Cluster_2206	Pocillopora_meandrina_HIv1___Sc0000006	526275	526840	566	296	158	0.0	-	UACUUCCCACUUUUGGACCAUUAAUGAGA	13	7	284	1	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:526964-528351	Cluster_2207	Pocillopora_meandrina_HIv1___Sc0000006	526964	528351	1388	5313	988	0.006211180124223602	-	UUGUAACUGCGAUCGUUCUUUGGAGC	313	21	4950	13	108	126	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:528645-530055	Cluster_2208	Pocillopora_meandrina_HIv1___Sc0000006	528645	530055	1411	1991	709	0.011551983927674536	-	UAAGACAAGUACUUCAAACACUCUCUAGUAG	138	12	1916	5	7	21	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:537436-537912	Cluster_2209	Pocillopora_meandrina_HIv1___Sc0000006	537436	537912	477	3087	309	0.009070294784580499	-	UGAUUGAGUCAAAGACAAUGUGGGAGUU	1160	9	2974	5	8	10	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:540451-540877	Cluster_2210	Pocillopora_meandrina_HIv1___Sc0000006	540451	540877	427	209	87	0.004784688995215311	-	UGGUGUCGCUGUAGCAUUAUACAUGUUUAC	50	8	199	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:542720-543123	Cluster_2211	Pocillopora_meandrina_HIv1___Sc0000006	542720	543123	404	146	64	0.0	-	UACUAGUCUGUGACCUUAUUUGAAUUUGUA	25	5	139	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:543292-543722	Cluster_2212	Pocillopora_meandrina_HIv1___Sc0000006	543292	543722	431	257	88	0.011673151750972763	-	UUUACAGGGAUUUGGAAACAAAAAUUACAUC	97	17	235	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:547215-547644	Cluster_2213	Pocillopora_meandrina_HIv1___Sc0000006	547215	547644	430	497	141	0.0	-	UUGAACGUCACUGUCUAUAAGCAAUGC	36	3	463	1	10	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:553903-554332	Cluster_2214	Pocillopora_meandrina_HIv1___Sc0000006	553903	554332	430	553	108	0.0	-	UUUUCCAGAAAGACCAUUAACACUUAGAUU	183	2	549	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:554894-555325	Cluster_2215	Pocillopora_meandrina_HIv1___Sc0000006	554894	555325	432	760	162	0.0013157894736842105	-	UUUGAAACCCCGAUUCAGUUGGACAAAACU	289	24	724	0	0	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:560719-561285	Cluster_2216	Pocillopora_meandrina_HIv1___Sc0000006	560719	561285	567	579	181	0.017271157167530225	-	UAAGAACUAACUGGUGUGAGGUGCUAUU	172	9	557	1	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:561705-562132	Cluster_2217	Pocillopora_meandrina_HIv1___Sc0000006	561705	562132	428	200	111	0.02	-	UCGAGAUCCUGAGCU	19	23	175	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:566406-566836	Cluster_2218	Pocillopora_meandrina_HIv1___Sc0000006	566406	566836	431	467	72	0.004282655246252677	-	UUUCUGCACUUAUUGGCAAUCUUUUGCUGGA	80	5	455	2	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:567087-567762	Cluster_2219	Pocillopora_meandrina_HIv1___Sc0000006	567087	567762	676	380	127	0.0	-	UGACAUGCAGGUAUACAAUGAAAGCAAGA	39	5	368	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:567808-568217	Cluster_2220	Pocillopora_meandrina_HIv1___Sc0000006	567808	568217	410	222	81	0.0	-	UGAGAUGCUUGGUAAUUAUAGGUUCGG	36	14	197	3	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:568764-569364	Cluster_2221	Pocillopora_meandrina_HIv1___Sc0000006	568764	569364	601	384	145	0.0026041666666666665	-	UGAGAAUUCACAGCUCUGAUAUAGAAGAUA	34	21	356	2	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:664078-664504	Cluster_2222	Pocillopora_meandrina_HIv1___Sc0000006	664078	664504	427	202	110	0.9108910891089109	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	18	1	187	1	3	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:743223-743711	Cluster_2223	Pocillopora_meandrina_HIv1___Sc0000006	743223	743711	489	1069	260	0.8596819457436857	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	146	18	930	5	16	64	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:790840-791737	Cluster_2224	Pocillopora_meandrina_HIv1___Sc0000006	790840	791737	898	526	221	0.5228136882129277	.	UAUUCUUAUCAUCUGCGUUUGGUCUACUGC	41	5	476	2	2	17	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:807710-808138	Cluster_2225	Pocillopora_meandrina_HIv1___Sc0000006	807710	808138	429	260	95	0.23461538461538461	.	UGUACAUCAAUUCUUUAUCCAAACCACU	35	3	244	0	1	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:958695-959122	Cluster_2226	Pocillopora_meandrina_HIv1___Sc0000006	958695	959122	428	406	156	0.16995073891625614	-	UUGGAACGUGUUGCUGAACGCUUGCU	38	28	338	7	13	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1012623-1013052	Cluster_2227	Pocillopora_meandrina_HIv1___Sc0000006	1012623	1013052	430	287	64	0.003484320557491289	-	AGUUGACAUAUUGACUGGUACGAACAAGGG	44	6	270	0	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1058984-1059413	Cluster_2228	Pocillopora_meandrina_HIv1___Sc0000006	1058984	1059413	430	369	74	0.8943089430894309	+	UCAUUUCUUCUACAGACACUGGAUACCAGA	104	8	305	6	2	16	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1068383-1068820	Cluster_2229	Pocillopora_meandrina_HIv1___Sc0000006	1068383	1068820	438	240	133	0.65	.	UCAUACGGCUUCUUGAAUUUAUCCAGU	13	5	211	3	5	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1070154-1070581	Cluster_2230	Pocillopora_meandrina_HIv1___Sc0000006	1070154	1070581	428	118	15	0.9915254237288136	+	UACCAAGGUCUUGUAGUCUAGUACAACU	76	0	116	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1072093-1072497	Cluster_2231	Pocillopora_meandrina_HIv1___Sc0000006	1072093	1072497	405	140	82	0.7642857142857142	.	UGCGAAAUGAACUCAGAGCUUUCUG	18	2	124	3	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1102308-1102883	Cluster_2232	Pocillopora_meandrina_HIv1___Sc0000006	1102308	1102883	576	551	234	0.3139745916515426	.	UAUGACAGUUUUUCCGACAUCGAAUUUAGC	32	26	503	1	4	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1107124-1107548	Cluster_2233	Pocillopora_meandrina_HIv1___Sc0000006	1107124	1107548	425	147	83	0.2789115646258503	.	UAAGAGAUCAACUGUCAACGGACGGCUAU	6	3	140	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1117900-1118499	Cluster_2234	Pocillopora_meandrina_HIv1___Sc0000006	1117900	1118499	600	2996	434	0.09279038718291055	-	UAUCAUGGUCUAAAAUUGGUGCUUCAGUU	585	11	2884	9	15	36	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1119518-1119944	Cluster_2235	Pocillopora_meandrina_HIv1___Sc0000006	1119518	1119944	427	177	63	0.3107344632768362	.	UUAAAACGUGUUGCUGAACGCUUGCUAC	27	10	156	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1184891-1185316	Cluster_2236	Pocillopora_meandrina_HIv1___Sc0000006	1184891	1185316	426	104	43	0.038461538461538464	-	AAUGGGAAAACGAGAACAGCGUGAGUGA	41	2	98	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1283609-1284026	Cluster_2237	Pocillopora_meandrina_HIv1___Sc0000006	1283609	1284026	418	190	64	0.9210526315789473	+	UAAAUCUGGAGACUGGGC	52	150	23	8	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1564153-1564568	Cluster_2238	Pocillopora_meandrina_HIv1___Sc0000006	1564153	1564568	416	209	47	0.0	-	AAACUGCGAAUGGCU	53	209	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1704199-1704625	Cluster_2239	Pocillopora_meandrina_HIv1___Sc0000006	1704199	1704625	427	258	102	0.8604651162790697	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	34	5	217	9	5	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1760581-1761007	Cluster_2240	Pocillopora_meandrina_HIv1___Sc0000006	1760581	1761007	427	246	106	0.8373983739837398	+	UCGAGAGAUUUAUCCUAGAAAGGCGAGC	27	16	193	0	2	12	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1764725-1765153	Cluster_2241	Pocillopora_meandrina_HIv1___Sc0000006	1764725	1765153	429	290	94	0.9241379310344827	+	UCAUAACUAGUGUCCAGAUCUCUCAUC	52	20	265	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1770604-1771021	Cluster_2242	Pocillopora_meandrina_HIv1___Sc0000006	1770604	1771021	418	148	83	0.9932432432432432	+	UGAGUAUUUUUCUAGUUCUGGGACUGCC	10	3	133	0	2	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1785098-1785525	Cluster_2243	Pocillopora_meandrina_HIv1___Sc0000006	1785098	1785525	428	261	119	0.9961685823754789	+	UUCGUCACCAUCUUCACUUUCCCUCAGUGC	26	5	245	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1794331-1794759	Cluster_2244	Pocillopora_meandrina_HIv1___Sc0000006	1794331	1794759	429	233	66	0.9785407725321889	+	UUACAAUUUCUCUCUUGACCUUUAAUUUC	88	7	203	1	2	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1796727-1797520	Cluster_2245	Pocillopora_meandrina_HIv1___Sc0000006	1796727	1797520	794	1217	351	0.9548069022185702	+	UUGGGAUUGUGACUGGUUUAAAGGUGAGU	109	15	1143	15	15	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1800817-1801246	Cluster_2246	Pocillopora_meandrina_HIv1___Sc0000006	1800817	1801246	430	455	122	0.9868131868131869	+	UGAACUGCAAGAAACUGCUCGUGGAUCUGC	170	13	428	0	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1801823-1802256	Cluster_2247	Pocillopora_meandrina_HIv1___Sc0000006	1801823	1802256	434	390	113	0.9974358974358974	+	UUCACCAGGAACGAUCUCAGGUACUUUG	63	2	374	1	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1802435-1802851	Cluster_2248	Pocillopora_meandrina_HIv1___Sc0000006	1802435	1802851	417	210	109	1.0	+	UGUCUGACAGUUGUCGUUCUGUACCGUC	11	3	206	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1810844-1811273	Cluster_2249	Pocillopora_meandrina_HIv1___Sc0000006	1810844	1811273	430	126	30	0.9920634920634921	+	UGCCUUAAGACCAGAUUGUUUACAGUGAGA	67	5	119	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1814556-1815680	Cluster_2250	Pocillopora_meandrina_HIv1___Sc0000006	1814556	1815680	1125	894	318	0.9921700223713646	+	UCCAUUUCCAUACUUGAGCUUGAGCCACC	80	16	853	2	7	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1839231-1839665	Cluster_2251	Pocillopora_meandrina_HIv1___Sc0000006	1839231	1839665	435	311	173	0.9935691318327974	+	UCAGAUUUGUGCUUGAUGGUCUGUGUGC	12	9	297	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1841407-1841835	Cluster_2252	Pocillopora_meandrina_HIv1___Sc0000006	1841407	1841835	429	259	108	0.9961389961389961	+	UGAAAGAUAUUGUGGUGCGACGCCGUAGA	29	1	257	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1846848-1847277	Cluster_2253	Pocillopora_meandrina_HIv1___Sc0000006	1846848	1847277	430	195	73	1.0	+	UUUAUAUCUGUGUAUUUCAACUUUGGCGUU	52	1	193	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1850115-1853109	Cluster_2254	Pocillopora_meandrina_HIv1___Sc0000006	1850115	1853109	2995	9717	1716	0.9876505094164866	+	UGAAUACUUAAGGGUCGGUCAGGCUGAUA	1138	105	9401	25	40	61	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1861618-1862023	Cluster_2255	Pocillopora_meandrina_HIv1___Sc0000006	1861618	1862023	406	162	83	0.20987654320987653	.	UAAGCAAUGUCGGUUUCCAAAAUAAACUGG	15	1	149	2	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1864158-1864864	Cluster_2256	Pocillopora_meandrina_HIv1___Sc0000006	1864158	1864864	707	387	206	0.5038759689922481	.	UAAGGUUUCCAAUUGCCUCCGUUGGGCA	15	15	310	18	7	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1881939-1882474	Cluster_2257	Pocillopora_meandrina_HIv1___Sc0000006	1881939	1882474	536	750	275	0.8933333333333333	+	UUAUCCUUUAGUUUUGAGUCUGGCAAUU	63	18	686	3	7	6	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1895834-1897291	Cluster_2258	Pocillopora_meandrina_HIv1___Sc0000006	1895834	1897291	1458	4020	1175	0.5945273631840796	.	UUAAAUCACAUUUACGCUGCAAUCUGGA	109	91	3393	79	104	151	202	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1897414-1898305	Cluster_2259	Pocillopora_meandrina_HIv1___Sc0000006	1897414	1898305	892	4745	714	0.8410958904109589	+	UACGCGAGGAAGUCUUUACCCAUGAAUG	763	65	4404	12	55	107	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1898536-1898963	Cluster_2260	Pocillopora_meandrina_HIv1___Sc0000006	1898536	1898963	428	412	74	0.9563106796116505	+	UGAGUUAAUAUCUGGUCCACUGAAGAA	126	8	371	1	1	30	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1899014-1899789	Cluster_2261	Pocillopora_meandrina_HIv1___Sc0000006	1899014	1899789	776	10134	963	0.26850207223209	.	GAACUUCAGAUCUUUACGUGACUACAGCA	1558	211	9356	26	30	68	443	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1900971-1902395	Cluster_2262	Pocillopora_meandrina_HIv1___Sc0000006	1900971	1902395	1425	10258	1993	0.40846168843829206	.	ACACAGUGCAACUCUCGAAUCUUAAAAAU	811	141	8995	105	120	342	555	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1902953-1903570	Cluster_2263	Pocillopora_meandrina_HIv1___Sc0000006	1902953	1903570	618	648	170	0.9814814814814815	+	UACGGUGUUCCAUGCCUCUGUAUGAAG	66	6	610	8	4	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1921982-1922403	Cluster_2264	Pocillopora_meandrina_HIv1___Sc0000006	1921982	1922403	422	142	72	0.8380281690140845	+	UAUGAAUGCUCUCGUUGUUGACUGAAG	10	0	126	1	5	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1930275-1930840	Cluster_2265	Pocillopora_meandrina_HIv1___Sc0000006	1930275	1930840	566	588	180	0.4642857142857143	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	211	11	501	6	5	31	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1946306-1946734	Cluster_2266	Pocillopora_meandrina_HIv1___Sc0000006	1946306	1946734	429	498	130	0.9698795180722891	+	UGUAGAAUCAAUCUGUUACUAAGACACC	130	2	481	10	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1947525-1947929	Cluster_2267	Pocillopora_meandrina_HIv1___Sc0000006	1947525	1947929	405	200	131	0.81	+	UACUUCUAACAGCGUUUCUUUUAGCUCU	10	3	182	2	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1948502-1949040	Cluster_2268	Pocillopora_meandrina_HIv1___Sc0000006	1948502	1949040	539	519	190	0.7996146435452793	.	UGUAUUCACUUGGGUUAACUCUUCCACA	112	0	510	3	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1967024-1967498	Cluster_2269	Pocillopora_meandrina_HIv1___Sc0000006	1967024	1967498	475	5079	148	0.02087025004922229	-	CAUUCUGCUUACACGGUUUGAGGACUUGUA	2482	5	5047	0	4	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1972166-1972656	Cluster_2270	Pocillopora_meandrina_HIv1___Sc0000006	1972166	1972656	491	1033	187	0.1132623426911907	-	UGAGAUUGGCUGGGAUUUUGGUGAGUGG	99	22	962	6	6	21	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1978683-1979218	Cluster_2271	Pocillopora_meandrina_HIv1___Sc0000006	1978683	1979218	536	529	210	0.19659735349716445	-	UGUAUUCACUUGGGUUAACUCUUCCACA	103	2	504	3	2	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1979797-1980198	Cluster_2272	Pocillopora_meandrina_HIv1___Sc0000006	1979797	1980198	402	171	111	0.14619883040935672	-	UGAUUUCGGUAUUGAUCCAGGGAAGUG	7	2	152	1	1	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:1980989-1981417	Cluster_2273	Pocillopora_meandrina_HIv1___Sc0000006	1980989	1981417	429	477	132	0.023060796645702306	-	UGUAGAAUCAAUCUGUUACUAAGACACC	109	3	458	9	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2002625-2003025	Cluster_2274	Pocillopora_meandrina_HIv1___Sc0000006	2002625	2003025	401	135	58	0.007407407407407408	-	UGUGUGUUUCUUUCGUGCGUAUUCAGAGC	15	1	130	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2004194-2005357	Cluster_2275	Pocillopora_meandrina_HIv1___Sc0000006	2004194	2005357	1164	2955	904	0.047377326565143825	-	UAAUUUCUUUCAGUUGUUGGCUUGAGG	298	29	2689	18	19	39	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2007314-2007983	Cluster_2276	Pocillopora_meandrina_HIv1___Sc0000006	2007314	2007983	670	2071	254	0.005311443746982134	-	UGUCAAAUUCAGGUUGUGUCAGGAGUCUGC	351	9	2015	1	1	27	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2010508-2010936	Cluster_2277	Pocillopora_meandrina_HIv1___Sc0000006	2010508	2010936	429	514	73	0.9416342412451362	+	UUGAGUCUUUCUUUAGUAAUAUGCAGUG	81	2	505	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2012351-2012779	Cluster_2278	Pocillopora_meandrina_HIv1___Sc0000006	2012351	2012779	429	232	98	0.03017241379310345	-	UAUGAUUGAAUUGACUCGUGGUAGCUAUU	17	5	214	2	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2027220-2027971	Cluster_2279	Pocillopora_meandrina_HIv1___Sc0000006	2027220	2027971	752	448	239	0.044642857142857144	-	UGAUCGUGUUUUUCAGCCCAUAGUUGGACA	39	15	383	10	7	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2029210-2029632	Cluster_2280	Pocillopora_meandrina_HIv1___Sc0000006	2029210	2029632	423	167	79	0.005988023952095809	-	UGAUUUGUUGCUCAACGUAAUUCGUAACCGA	16	2	165	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2032671-2033100	Cluster_2281	Pocillopora_meandrina_HIv1___Sc0000006	2032671	2033100	430	899	122	0.004449388209121246	-	UGUUAUCACGUCUGUACUCUUCAAUCGAC	475	2	891	1	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2042803-2043817	Cluster_2282	Pocillopora_meandrina_HIv1___Sc0000006	2042803	2043817	1015	1046	328	0.1826003824091778	-	UAAGAUCUCUUCGGUCAGAUCGUCACGG	127	13	1012	2	2	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2044075-2044510	Cluster_2283	Pocillopora_meandrina_HIv1___Sc0000006	2044075	2044510	436	1309	141	0.9144385026737968	+	UGUAUCUGCAGCUCUUGUUAAUUUGUGC	266	2	1294	1	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2058209-2058968	Cluster_2284	Pocillopora_meandrina_HIv1___Sc0000006	2058209	2058968	760	1642	352	0.953714981729598	+	UGCAAUUUGAAAUCCUUUGUCGGCCAUA	131	33	1398	11	4	160	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2062004-2063022	Cluster_2285	Pocillopora_meandrina_HIv1___Sc0000006	2062004	2063022	1019	1364	623	0.6796187683284457	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	58	27	1204	9	13	31	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2064225-2064648	Cluster_2286	Pocillopora_meandrina_HIv1___Sc0000006	2064225	2064648	424	243	150	0.09465020576131687	-	UGGAACUCUUUGGAUUGUUGGAAACUGACA	13	1	227	2	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2067012-2067673	Cluster_2287	Pocillopora_meandrina_HIv1___Sc0000006	2067012	2067673	662	820	289	0.00853658536585366	-	UGACAGACUCCCAGAC	124	180	586	5	3	17	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2070860-2071363	Cluster_2288	Pocillopora_meandrina_HIv1___Sc0000006	2070860	2071363	504	3874	374	0.6187403200826019	.	UCGUUUCAAUGCUCUGAGCACUGUUGCUC	710	21	3504	15	37	122	175	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2071608-2072035	Cluster_2289	Pocillopora_meandrina_HIv1___Sc0000006	2071608	2072035	428	144	46	0.04861111111111111	-	UCAGAAUUGGUGGGCUCAGUGGACGGCC	35	0	140	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2074248-2075236	Cluster_2290	Pocillopora_meandrina_HIv1___Sc0000006	2074248	2075236	989	1502	467	0.02529960053262317	-	UGAACGGAACUGUUGUUGUGGAUGACAUC	141	60	1365	14	19	17	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2075446-2075875	Cluster_2291	Pocillopora_meandrina_HIv1___Sc0000006	2075446	2075875	430	396	162	0.010101010101010102	-	UCCAUAGUCAUCUGUGAUAUCUUCAGAGA	40	10	367	2	2	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2077278-2077698	Cluster_2292	Pocillopora_meandrina_HIv1___Sc0000006	2077278	2077698	421	188	98	0.0	-	UGAAUCGCUGUAGGUUUGGCCUGUGAAG	19	6	180	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2082366-2082803	Cluster_2293	Pocillopora_meandrina_HIv1___Sc0000006	2082366	2082803	438	1427	244	0.002102312543798178	-	UGUGAAUUCCUUCUCAAAAAGAGCCUGG	147	1	1382	1	3	3	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2083932-2084468	Cluster_2294	Pocillopora_meandrina_HIv1___Sc0000006	2083932	2084468	537	1189	251	0.010933557611438183	-	UGUUUCGCUCUUCAGUAAAAUCCCAGUUGA	111	22	1097	7	1	5	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2085227-2085652	Cluster_2295	Pocillopora_meandrina_HIv1___Sc0000006	2085227	2085652	426	146	54	0.03424657534246575	-	UCCUGCCUCCUCUGUACGAUAUUGCUGUG	29	6	139	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2086591-2087011	Cluster_2296	Pocillopora_meandrina_HIv1___Sc0000006	2086591	2087011	421	196	97	0.0	-	UGAUCUUACUUGUUUCAACUCUGAGUCAGA	29	3	182	1	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2088855-2089282	Cluster_2297	Pocillopora_meandrina_HIv1___Sc0000006	2088855	2089282	428	170	62	0.01764705882352941	-	UUAUACGUGAAAAAUCUGUUCCGCUCUAUGU	20	7	161	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2089782-2090266	Cluster_2298	Pocillopora_meandrina_HIv1___Sc0000006	2089782	2090266	485	229	115	0.013100436681222707	-	UAAAUGUCGUGAGGUUGCUGUUUGAGCAUA	18	11	213	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2093361-2094326	Cluster_2299	Pocillopora_meandrina_HIv1___Sc0000006	2093361	2094326	966	8445	685	0.011841326228537596	-	UGAUUUGUUGCUGCCCUCUUGCUGC	2615	89	8027	16	65	101	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2094699-2095210	Cluster_2300	Pocillopora_meandrina_HIv1___Sc0000006	2094699	2095210	512	1000	297	0.046	-	UGGUUUGUUGAGGCAUUUGUCUAAUGGC	101	15	965	8	4	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2097988-2098522	Cluster_2301	Pocillopora_meandrina_HIv1___Sc0000006	2097988	2098522	535	462	206	0.017316017316017316	-	UGCGAUUUAACUGGAUACUGGGUGUGGUU	50	18	428	0	2	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2098994-2099492	Cluster_2302	Pocillopora_meandrina_HIv1___Sc0000006	2098994	2099492	499	480	206	0.010416666666666666	-	UAGGUUCUUUAAGGGAAUAUUCAAAACGUG	45	12	455	1	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2100159-2100564	Cluster_2303	Pocillopora_meandrina_HIv1___Sc0000006	2100159	2100564	406	275	130	0.02181818181818182	-	UGAUUACUUGCUGGCCUUCCUCUGAAGU	22	6	254	0	0	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2100775-2101564	Cluster_2304	Pocillopora_meandrina_HIv1___Sc0000006	2100775	2101564	790	524	277	0.03244274809160305	-	UGGGUGUGGAUUUCCUUAGCUGAUAAAUA	46	27	478	6	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2103424-2103853	Cluster_2305	Pocillopora_meandrina_HIv1___Sc0000006	2103424	2103853	430	171	76	0.011695906432748537	-	UUCGAACACUUUGUCUCUUACCACCAGAGC	51	8	159	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2105131-2105704	Cluster_2306	Pocillopora_meandrina_HIv1___Sc0000006	2105131	2105704	574	573	260	0.0034904013961605585	-	UUCCUGCACAGCUCACAUUUAAAACUGUC	84	22	541	2	1	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2106041-2107040	Cluster_2307	Pocillopora_meandrina_HIv1___Sc0000006	2106041	2107040	1000	3042	502	0.09171597633136094	-	UGCACUUCAUUUUCUGGGAUUUCAUUGUUC	1039	91	2664	21	10	221	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2107148-2108374	Cluster_2308	Pocillopora_meandrina_HIv1___Sc0000006	2107148	2108374	1227	9377	1239	0.0005332195798229711	-	UUGGUGUGAUUGUCAUGUCUGGGAAUUUU	835	145	8948	39	115	62	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2108910-2109311	Cluster_2309	Pocillopora_meandrina_HIv1___Sc0000006	2108910	2109311	402	99	36	0.010101010101010102	-	UGUGAAAAUUCUCUGCGCCAAUUAGUUGAGC	27	2	93	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2110009-2110473	Cluster_2310	Pocillopora_meandrina_HIv1___Sc0000006	2110009	2110473	465	1805	168	0.0	-	UACAGCUCUUCAAUUUCUGCAUUUCCAGA	657	3	1793	5	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2222589-2223007	Cluster_2311	Pocillopora_meandrina_HIv1___Sc0000006	2222589	2223007	419	147	8	0.0	-	GAAGUUCUGGUUUAAAAAA	79	146	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2367614-2368043	Cluster_2312	Pocillopora_meandrina_HIv1___Sc0000006	2367614	2368043	430	146	54	0.02054794520547945	-	UCUGCUGUAUAUUCCAAUCUUUGUCAAUGA	22	4	138	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2382026-2382706	Cluster_2313	Pocillopora_meandrina_HIv1___Sc0000006	2382026	2382706	681	1246	360	0.22391653290529695	.	UCAGCUCGAUCCAGAUCAUUAGCUAAUGAAU	125	16	1135	2	6	26	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2406541-2407009	Cluster_2314	Pocillopora_meandrina_HIv1___Sc0000006	2406541	2407009	469	1782	185	0.004489337822671156	-	UGGGGAAGGUCUUCUUGGUCUGGAGAAA	460	12	1630	5	8	39	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2407808-2408403	Cluster_2315	Pocillopora_meandrina_HIv1___Sc0000006	2407808	2408403	596	800	162	0.01125	-	UUUGAUUUUAAUGGGAUGCUACUGCCCUGUA	182	21	760	3	5	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2409396-2409958	Cluster_2316	Pocillopora_meandrina_HIv1___Sc0000006	2409396	2409958	563	210	87	0.014285714285714285	-	UUGUCUUGUAUACUCCUUGGCUAGCUGU	22	3	200	0	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2415407-2415972	Cluster_2317	Pocillopora_meandrina_HIv1___Sc0000006	2415407	2415972	566	747	193	0.0107095046854083	-	UGAAACGAAUAGCUGCUCAACCUGUGGG	63	24	698	0	6	14	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2429559-2429960	Cluster_2318	Pocillopora_meandrina_HIv1___Sc0000006	2429559	2429960	402	176	94	0.4147727272727273	.	UGCAAACUCGUCUGUAGACUCUGUACG	26	1	170	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2430788-2432068	Cluster_2319	Pocillopora_meandrina_HIv1___Sc0000006	2430788	2432068	1281	5445	1146	0.9616161616161616	+	UCUUCGCUGAUUUCUUCCCACAGGGACU	265	32	5301	6	8	44	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2434449-2434864	Cluster_2320	Pocillopora_meandrina_HIv1___Sc0000006	2434449	2434864	416	325	15	0.0	-	UAGGGUGCUGUCGGCU	291	322	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2446610-2447281	Cluster_2321	Pocillopora_meandrina_HIv1___Sc0000006	2446610	2447281	672	382	118	0.07853403141361257	-	UGCGAGGAAAAGCUUGUGUAGACGCGGC	49	9	361	3	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2448506-2448935	Cluster_2322	Pocillopora_meandrina_HIv1___Sc0000006	2448506	2448935	430	106	24	0.009433962264150943	-	UGCUUGUCCCACUGUACGACCUUAGUCGUC	68	4	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2456276-2456696	Cluster_2323	Pocillopora_meandrina_HIv1___Sc0000006	2456276	2456696	421	105	32	0.0	-	UAGGAUCUUGUAAGAGAAGCUGCGCUUCCA	28	1	101	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2481723-2482147	Cluster_2324	Pocillopora_meandrina_HIv1___Sc0000006	2481723	2482147	425	246	125	0.016260162601626018	-	UGCUACCCAGUUCUGUGUCUUCAUUGAAUG	16	8	234	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2483224-2483653	Cluster_2325	Pocillopora_meandrina_HIv1___Sc0000006	2483224	2483653	430	232	101	0.05172413793103448	-	UGAUUGAUCUAAAUAACGACUUUGUAAUGU	21	3	227	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2490005-2491194	Cluster_2326	Pocillopora_meandrina_HIv1___Sc0000006	2490005	2491194	1190	4287	779	0.006531373921156987	-	UACUGUCAGGUUGGUGAAAGUGUAUGAGU	925	87	3975	18	87	26	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2492779-2493187	Cluster_2327	Pocillopora_meandrina_HIv1___Sc0000006	2492779	2493187	409	164	76	0.0975609756097561	-	UGUGUUUCUAUAAGUUCUGUUGCUUUAU	11	4	155	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2493873-2494299	Cluster_2328	Pocillopora_meandrina_HIv1___Sc0000006	2493873	2494299	427	256	127	0.03125	-	UGUGUGCUGGAAGAAAUCUUUGAAAGGA	14	4	246	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2494752-2495463	Cluster_2329	Pocillopora_meandrina_HIv1___Sc0000006	2494752	2495463	712	974	356	0.013347022587268994	-	UGGUUGCUAUACACUCUCUGAGCUUGGU	97	22	921	2	4	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2510445-2510874	Cluster_2330	Pocillopora_meandrina_HIv1___Sc0000006	2510445	2510874	430	348	81	0.0028735632183908046	-	UAUGACGGUACUUUCAAUGGCUUCAGGC	118	1	318	3	11	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2511056-2511479	Cluster_2331	Pocillopora_meandrina_HIv1___Sc0000006	2511056	2511479	424	123	68	0.024390243902439025	-	UUGACGUGAAAGUUUCUGGACUUGUUUCGA	11	0	119	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2516343-2516833	Cluster_2332	Pocillopora_meandrina_HIv1___Sc0000006	2516343	2516833	491	330	104	0.0030303030303030303	-	UGUCCUUCCUGAAGAUGGUGUAACCAGGA	42	7	296	23	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2534257-2535024	Cluster_2333	Pocillopora_meandrina_HIv1___Sc0000006	2534257	2535024	768	1961	338	0.1677715451300357	-	UUUCCUCUGUUACUGGUAGGAACGGACAGU	220	133	1669	39	14	19	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2544036-2544465	Cluster_2334	Pocillopora_meandrina_HIv1___Sc0000006	2544036	2544465	430	136	45	0.0	-	UGUUCAAGAAUCUGUCUGGUCAAAUCCAUC	59	3	131	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2544883-2545307	Cluster_2335	Pocillopora_meandrina_HIv1___Sc0000006	2544883	2545307	425	118	55	0.03389830508474576	-	UAGGAAAGAUCUUGAUGACUAUGAUUCCCA	26	7	104	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2547406-2547834	Cluster_2336	Pocillopora_meandrina_HIv1___Sc0000006	2547406	2547834	429	155	46	0.0	-	CAGGAUUCGACACUGUAAAUUUCAUGGUG	38	4	148	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2552089-2552517	Cluster_2337	Pocillopora_meandrina_HIv1___Sc0000006	2552089	2552517	429	239	87	0.012552301255230125	-	UGGUAUUGGAUACUCUGAGCACUUGAGGGC	31	5	227	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2554191-2554619	Cluster_2338	Pocillopora_meandrina_HIv1___Sc0000006	2554191	2554619	429	145	54	0.0	-	UUGGUUUCCGAGGCACGGUCUUUGACAGU	43	6	138	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2556125-2556552	Cluster_2339	Pocillopora_meandrina_HIv1___Sc0000006	2556125	2556552	428	147	49	0.006802721088435374	-	UGCAUAUCUGCUGCAGACAAGGUGAAGAAU	42	3	138	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2561827-2564936	Cluster_2340	Pocillopora_meandrina_HIv1___Sc0000006	2561827	2564936	3110	8125	2204	0.018707692307692307	-	UCUUCAAUGAUUUCUUGUGCUGUCUGGG	325	121	7747	40	42	75	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2565126-2566072	Cluster_2341	Pocillopora_meandrina_HIv1___Sc0000006	2565126	2566072	947	2077	685	0.030813673567645642	-	UGUUUGGAGUGUCUGACGGCGUCUGUUC	102	25	1960	11	9	22	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2568267-2568696	Cluster_2342	Pocillopora_meandrina_HIv1___Sc0000006	2568267	2568696	430	825	151	0.007272727272727273	-	UUUUCACAAUCCUUCUGCUUCACUGUAGC	331	10	805	1	3	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2569202-2570581	Cluster_2343	Pocillopora_meandrina_HIv1___Sc0000006	2569202	2570581	1380	10459	1017	0.00047805717563820634	-	UAACACAAAAUAUCUGUUGAUUCAUGAGG	1516	181	9991	91	30	97	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2573127-2573671	Cluster_2344	Pocillopora_meandrina_HIv1___Sc0000006	2573127	2573671	545	1481	254	0.011478730587440918	-	UUGCAAAGAUAAAUCCGUGGCGAACUUC	225	13	1451	2	3	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2575795-2576223	Cluster_2345	Pocillopora_meandrina_HIv1___Sc0000006	2575795	2576223	429	141	44	0.0	-	UGUACAAAACUCUGAUGCCAUUAUGCCUC	62	1	133	3	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2577640-2579127	Cluster_2346	Pocillopora_meandrina_HIv1___Sc0000006	2577640	2579127	1488	5202	1479	0.08938869665513265	-	UAGCGGUAUUUUCUUCAAUAGUAAGGU	150	88	4685	38	33	151	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2579143-2580188	Cluster_2347	Pocillopora_meandrina_HIv1___Sc0000006	2579143	2580188	1046	2454	743	0.061532192339038304	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	262	59	2285	15	27	30	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2580255-2580666	Cluster_2348	Pocillopora_meandrina_HIv1___Sc0000006	2580255	2580666	412	136	74	0.04411764705882353	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	12	1	122	3	5	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2581562-2583132	Cluster_2349	Pocillopora_meandrina_HIv1___Sc0000006	2581562	2583132	1571	13818	1693	0.03321754233608337	-	UUUGACGGUCCUUUCAAUAUCUUCGGGAU	2053	236	13116	41	58	99	268	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2583203-2583715	Cluster_2350	Pocillopora_meandrina_HIv1___Sc0000006	2583203	2583715	513	6133	516	0.6275884558943421	.	CGGUACUACAAAAAGAUCCUGAUGGACAGU	1531	83	5102	40	14	97	797	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2586120-2586969	Cluster_2351	Pocillopora_meandrina_HIv1___Sc0000006	2586120	2586969	850	1606	410	0.40099626400996263	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	180	25	1521	13	7	15	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2612856-2613281	Cluster_2352	Pocillopora_meandrina_HIv1___Sc0000006	2612856	2613281	426	230	70	0.021739130434782608	-	UGAUGAUUCAUAUUGUUACAGUUUGU	78	9	206	1	0	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2629857-2630321	Cluster_2353	Pocillopora_meandrina_HIv1___Sc0000006	2629857	2630321	465	2997	414	0.0	-	CUGAUUAAAAUAACCUCACAGAGCUCU	221	707	1715	226	172	51	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2630686-2631147	Cluster_2354	Pocillopora_meandrina_HIv1___Sc0000006	2630686	2631147	462	4558	710	0.0008775778850372971	-	GAGGAAUGUGAAUAUGUCUACUGAUGAUA	516	525	3501	139	140	115	138	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2631458-2631927	Cluster_2355	Pocillopora_meandrina_HIv1___Sc0000006	2631458	2631927	470	1568	483	0.0012755102040816326	-	UGUCAAUGAAGAACAAUACGA	91	412	645	129	128	131	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2632079-2632574	Cluster_2356	Pocillopora_meandrina_HIv1___Sc0000006	2632079	2632574	496	5608	599	0.0007132667617689016	-	CCACUGUGAUGACUCGAAUAAUCCC	1056	976	2562	273	571	562	664	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2632754-2633251	Cluster_2357	Pocillopora_meandrina_HIv1___Sc0000006	2632754	2633251	498	4161	541	0.0002403268445085316	-	CCACCGUGAUGACUAGA	403	2070	1058	258	217	302	256	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2760526-2760954	Cluster_2358	Pocillopora_meandrina_HIv1___Sc0000006	2760526	2760954	429	322	59	0.9968944099378882	+	UUUCAAGAAAGCUCUGGAAUUGUGUGCAG	88	12	298	1	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:2904384-2904807	Cluster_2359	Pocillopora_meandrina_HIv1___Sc0000006	2904384	2904807	424	79	21	0.0379746835443038	-	UUCAAUCACUUGCUUGAGAUCGUGU	20	4	73	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3026686-3027096	Cluster_2360	Pocillopora_meandrina_HIv1___Sc0000006	3026686	3027096	411	132	72	0.9545454545454546	+	UGUGACCGAGGUCUUGAAAA	10	60	12	27	16	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3077648-3078920	Cluster_2361	Pocillopora_meandrina_HIv1___Sc0000006	3077648	3078920	1273	1677	598	0.8807394156231365	+	UAAUGCUGAUCUUCUGUUCUUUACAGUA	52	21	1554	4	15	34	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3080503-3081013	Cluster_2362	Pocillopora_meandrina_HIv1___Sc0000006	3080503	3081013	511	982	307	0.6863543788187373	.	UAAACAUGCAGCGCCGUCUUCUACUGAGA	141	8	916	6	8	19	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3082040-3083002	Cluster_2363	Pocillopora_meandrina_HIv1___Sc0000006	3082040	3083002	963	2839	602	0.5790771398379712	.	AAAUGUCUCAAGUUCAGUGGAAUCAGUG	183	26	2649	8	15	34	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3084650-3085078	Cluster_2364	Pocillopora_meandrina_HIv1___Sc0000006	3084650	3085078	429	319	62	0.9843260188087775	+	UAGGACAACUGAGAAUCCACGUAGACUC	114	0	307	2	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3160145-3160569	Cluster_2365	Pocillopora_meandrina_HIv1___Sc0000006	3160145	3160569	425	888	89	0.021396396396396396	-	GUUUAUAUCAAGUUUUCAGACUGUG	378	4	609	8	3	143	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3181842-3182250	Cluster_2366	Pocillopora_meandrina_HIv1___Sc0000006	3181842	3182250	409	130	82	0.7	.	UGCGGACCUUUGUGAGAACAG	13	77	7	35	9	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3248159-3248782	Cluster_2367	Pocillopora_meandrina_HIv1___Sc0000006	3248159	3248782	624	1302	205	0.026881720430107527	-	UCAUAGAGUUUAAGACAAGCCCAACAGGUC	429	29	1196	11	42	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3295055-3295481	Cluster_2368	Pocillopora_meandrina_HIv1___Sc0000006	3295055	3295481	427	112	36	0.0	-	UGGGUUGACUGAAUUUGUGUGGAAGCUG	26	15	92	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3295560-3295986	Cluster_2369	Pocillopora_meandrina_HIv1___Sc0000006	3295560	3295986	427	102	18	0.0196078431372549	-	UAACCCGAGAACUGACACGUGAGUAGUC	62	1	87	1	1	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3300115-3300542	Cluster_2370	Pocillopora_meandrina_HIv1___Sc0000006	3300115	3300542	428	116	15	0.017241379310344827	-	UAACCCGAGAACUGACACGUGAGUAGUC	76	0	107	1	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3308604-3309513	Cluster_2371	Pocillopora_meandrina_HIv1___Sc0000006	3308604	3309513	910	979	440	0.08171603677221655	-	UCUGUACUAGAGCAAGAACAAGGUUUU	40	14	881	7	6	11	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3309928-3310589	Cluster_2372	Pocillopora_meandrina_HIv1___Sc0000006	3309928	3310589	662	236	106	0.012711864406779662	-	UAUCAAGUAGAGAUGUCUGAGCCCGAGG	20	1	232	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3447869-3448298	Cluster_2373	Pocillopora_meandrina_HIv1___Sc0000006	3447869	3448298	430	193	50	0.9119170984455959	+	UCAGAUUUUAGGUGGCAUACGAAACACUCA	44	3	188	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3486280-3486972	Cluster_2374	Pocillopora_meandrina_HIv1___Sc0000006	3486280	3486972	693	503	157	1.0	+	GUUAGUGAUGAUGAAGUAAA	68	121	308	26	16	18	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3756605-3757221	Cluster_2375	Pocillopora_meandrina_HIv1___Sc0000006	3756605	3757221	617	3020	1063	0.9993377483443708	+	CGCGGAUAAAAGACA	80	1137	1127	205	159	197	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3772459-3772886	Cluster_2376	Pocillopora_meandrina_HIv1___Sc0000006	3772459	3772886	428	151	41	1.0	+	UUGAAUCUUCUCUCACAUUCUCUGGAGC	53	3	144	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3780818-3781314	Cluster_2377	Pocillopora_meandrina_HIv1___Sc0000006	3780818	3781314	497	555	187	0.818018018018018	+	UGUUCCUGCACUUCUUAAGAACUUCGAAGC	28	33	478	5	3	16	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3800420-3802391	Cluster_2378	Pocillopora_meandrina_HIv1___Sc0000006	3800420	3802391	1972	5751	1562	0.9351417144844375	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	444	39	5486	20	25	61	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3802932-3803456	Cluster_2379	Pocillopora_meandrina_HIv1___Sc0000006	3802932	3803456	525	270	119	0.9629629629629629	+	UUAUAUAUUAAAUCUGCUUGAAUGAUCGC	17	1	251	2	0	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3804713-3805120	Cluster_2380	Pocillopora_meandrina_HIv1___Sc0000006	3804713	3805120	408	172	103	0.20348837209302326	.	UUGACGCACAUUUCUGAGCCUAGAAAUC	9	5	144	1	0	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3807595-3808403	Cluster_2381	Pocillopora_meandrina_HIv1___Sc0000006	3807595	3808403	809	4566	676	0.9662724485326325	+	UGCGAUAAAUGGCCAUGUGCAGUGAACC	876	55	4420	4	21	28	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3809026-3809444	Cluster_2382	Pocillopora_meandrina_HIv1___Sc0000006	3809026	3809444	419	108	51	1.0	+	AGCCUCAAGGAUGUUAUAAGAUAUG	18	8	93	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3816637-3817067	Cluster_2383	Pocillopora_meandrina_HIv1___Sc0000006	3816637	3817067	431	239	92	0.8786610878661087	+	UGUAAACUCUUGAAGGCUCUGAAAUAGCUCA	36	3	216	6	4	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3821515-3821939	Cluster_2384	Pocillopora_meandrina_HIv1___Sc0000006	3821515	3821939	425	135	48	0.9777777777777777	+	UUCUAGACAAGAUCUUUAAUAAAAAAUAA	25	7	122	2	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3825839-3826572	Cluster_2385	Pocillopora_meandrina_HIv1___Sc0000006	3825839	3826572	734	3115	658	0.974959871589085	+	UAACCGAUUUGAUCAAUGCUUCUGACGUGC	183	22	3024	11	7	23	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3834837-3835264	Cluster_2386	Pocillopora_meandrina_HIv1___Sc0000006	3834837	3835264	428	217	78	0.9953917050691244	+	UUUAUCAGUAUGAUGACUCUUUUUCACA	19	7	191	15	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3837756-3838530	Cluster_2387	Pocillopora_meandrina_HIv1___Sc0000006	3837756	3838530	775	958	403	0.8559498956158664	+	UAGGCGUUAAACUUUCAUUGAUAA	113	9	769	2	11	14	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3841572-3842002	Cluster_2388	Pocillopora_meandrina_HIv1___Sc0000006	3841572	3842002	431	405	56	0.9975308641975309	+	UUACUGCACUGAGGAUAACAAUGAUCAAUGA	100	11	389	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3857245-3857660	Cluster_2389	Pocillopora_meandrina_HIv1___Sc0000006	3857245	3857660	416	398	38	1.0	+	GUGCUUGGGAUCUGU	259	393	4	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3864910-3865336	Cluster_2390	Pocillopora_meandrina_HIv1___Sc0000006	3864910	3865336	427	120	55	0.9166666666666666	+	UGAUCUCAGUUGAAUUGUAAACCAAUU	55	1	110	0	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3870837-3871269	Cluster_2391	Pocillopora_meandrina_HIv1___Sc0000006	3870837	3871269	433	541	214	0.9186691312384473	+	UAUUAUCGAUAAGAAUCCCUAAACAUGU	41	7	506	1	7	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3872110-3872537	Cluster_2392	Pocillopora_meandrina_HIv1___Sc0000006	3872110	3872537	428	230	97	0.9565217391304348	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	68	2	224	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3872932-3873339	Cluster_2393	Pocillopora_meandrina_HIv1___Sc0000006	3872932	3873339	408	122	71	0.48360655737704916	.	ACUGGAUACAAAACUGCUCGAUGC	22	2	78	3	1	6	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3887839-3888263	Cluster_2394	Pocillopora_meandrina_HIv1___Sc0000006	3887839	3888263	425	112	54	0.9464285714285714	+	UUUUCCAGAAAGACCAUUAACACUU	11	3	98	2	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3898252-3898679	Cluster_2395	Pocillopora_meandrina_HIv1___Sc0000006	3898252	3898679	428	287	135	0.975609756097561	+	UGACUCAGUAGGGGUGUUUCUAUGCGCCAGU	15	3	268	2	1	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3899292-3899913	Cluster_2396	Pocillopora_meandrina_HIv1___Sc0000006	3899292	3899913	622	974	246	0.9917864476386037	+	UGUAAUACUUCAACAAGGGUGCCUCUGUC	136	5	949	4	1	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3900289-3901921	Cluster_2397	Pocillopora_meandrina_HIv1___Sc0000006	3900289	3901921	1633	2142	723	0.9724556489262371	+	UCUUCAAUGAUUUCUUGUGCUGUCUGGG	134	28	2033	9	9	15	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3907552-3908831	Cluster_2398	Pocillopora_meandrina_HIv1___Sc0000006	3907552	3908831	1280	2145	412	0.9081585081585082	+	UGAUUGUGUUUUCCAGGAACGUGUAAUGC	352	12	1964	5	19	38	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3911965-3912393	Cluster_2399	Pocillopora_meandrina_HIv1___Sc0000006	3911965	3912393	429	262	88	0.9694656488549618	+	UCUCUCUGUUUUGGCCACCUGAAUGUGCA	43	9	246	4	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3921710-3922139	Cluster_2400	Pocillopora_meandrina_HIv1___Sc0000006	3921710	3922139	430	291	36	1.0	+	UGCUUCUAGAGUCAAGUGGGACAAAGACU	86	0	288	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:3953956-3954951	Cluster_2401	Pocillopora_meandrina_HIv1___Sc0000006	3953956	3954951	996	575	329	0.4608695652173913	.	UGCAAGAACAAGUUCGCGACGUGGUAUU	23	18	538	4	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4000949-4001363	Cluster_2402	Pocillopora_meandrina_HIv1___Sc0000006	4000949	4001363	415	132	7	0.05303030303030303	-	GAUGAGGCUCAUAAC	125	126	2	2	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4058767-4059686	Cluster_2403	Pocillopora_meandrina_HIv1___Sc0000006	4058767	4059686	920	4441	337	0.17856338662463409	-	UUGGUGUCAUAGAAGCUUGUAGUAUCU	1792	81	4224	27	8	55	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4360792-4361217	Cluster_2404	Pocillopora_meandrina_HIv1___Sc0000006	4360792	4361217	426	197	65	0.030456852791878174	-	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	37	1	189	4	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4527159-4527575	Cluster_2405	Pocillopora_meandrina_HIv1___Sc0000006	4527159	4527575	417	138	34	0.9927536231884058	+	CGGCCUGAAAAAAAAAA	21	122	2	4	3	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4597982-4598401	Cluster_2406	Pocillopora_meandrina_HIv1___Sc0000006	4597982	4598401	420	186	14	0.9408602150537635	+	UGAAAAUCUUUGCUCUGAAA	132	181	1	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4669470-4670011	Cluster_2407	Pocillopora_meandrina_HIv1___Sc0000006	4669470	4670011	542	441	218	0.009070294784580499	-	UAGGAACAUGUCAAUUCGCACAUUC	82	105	245	23	25	14	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4705513-4705927	Cluster_2408	Pocillopora_meandrina_HIv1___Sc0000006	4705513	4705927	415	83	11	0.0	-	GCUACUUUGACCUCACC	42	82	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4741301-4741728	Cluster_2409	Pocillopora_meandrina_HIv1___Sc0000006	4741301	4741728	428	326	73	0.9938650306748467	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	93	14	307	1	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4761102-4761535	Cluster_2410	Pocillopora_meandrina_HIv1___Sc0000006	4761102	4761535	434	1828	59	0.0032822757111597373	-	UGUACCGUGAAACUGGACACUGAAGUUC	1127	0	1784	0	4	39	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4791746-4792175	Cluster_2411	Pocillopora_meandrina_HIv1___Sc0000006	4791746	4792175	430	191	53	0.16230366492146597	-	UGUGUUCCGAAUUGCACGAAAAAGGUCUAU	60	34	146	0	11	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:4866022-4866448	Cluster_2412	Pocillopora_meandrina_HIv1___Sc0000006	4866022	4866448	427	136	60	0.8455882352941176	+	UGAAGGGUUAUACAAAAAUAGGCUGGG	17	6	122	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5049404-5049818	Cluster_2413	Pocillopora_meandrina_HIv1___Sc0000006	5049404	5049818	415	89	23	0.11235955056179775	-	GACCCUGUUGAGCUA	29	84	2	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5095710-5096124	Cluster_2414	Pocillopora_meandrina_HIv1___Sc0000006	5095710	5096124	415	87	16	1.0	+	CGGCCUGAAAAAAGAA	30	83	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5140125-5140551	Cluster_2415	Pocillopora_meandrina_HIv1___Sc0000006	5140125	5140551	427	94	38	0.02127659574468085	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	25	0	92	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5141311-5141739	Cluster_2416	Pocillopora_meandrina_HIv1___Sc0000006	5141311	5141739	429	194	90	0.12886597938144329	-	UAGGCUAGUAGACCAAGUGACGCAGGCGU	23	7	166	1	3	14	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5163428-5163845	Cluster_2417	Pocillopora_meandrina_HIv1___Sc0000006	5163428	5163845	418	93	46	0.03225806451612903	-	UGACGUCCAAACGAGCCUGAUCUUGAUG	9	1	88	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5164016-5164444	Cluster_2418	Pocillopora_meandrina_HIv1___Sc0000006	5164016	5164444	429	2673	89	0.0	-	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1632	2	2664	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5165241-5165641	Cluster_2419	Pocillopora_meandrina_HIv1___Sc0000006	5165241	5165641	401	76	27	0.0	-	UUUUACGCAUGGGCUUUGAUGGU	16	1	55	0	2	17	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5171945-5172369	Cluster_2420	Pocillopora_meandrina_HIv1___Sc0000006	5171945	5172369	425	277	146	0.7148014440433214	.	UGUAAGACGCACUCUACUCUGUUGU	55	28	217	7	7	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5240371-5240798	Cluster_2421	Pocillopora_meandrina_HIv1___Sc0000006	5240371	5240798	428	339	120	0.032448377581120944	-	UCUGUCUCCUCUGUAAUAAUGACACUGA	63	2	319	3	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5265155-5265569	Cluster_2422	Pocillopora_meandrina_HIv1___Sc0000006	5265155	5265569	415	170	16	0.9764705882352941	+	GGUGUGCUCUUAACA	52	168	0	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5363172-5363595	Cluster_2423	Pocillopora_meandrina_HIv1___Sc0000006	5363172	5363595	424	122	41	0.8114754098360656	+	UGAUUGGUGCAUUUCGAUCCUUGCUGU	22	5	115	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5536702-5537200	Cluster_2424	Pocillopora_meandrina_HIv1___Sc0000006	5536702	5537200	499	5602	1094	0.994109246697608	+	GCUGAUUGAAAACUUUUCCCAAUA	319	1918	1659	475	382	388	780	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5546629-5547169	Cluster_2425	Pocillopora_meandrina_HIv1___Sc0000006	5546629	5547169	541	1838	471	0.0	-	GAUGGCUUGGGUGCUCAUGGGAACAUAU	184	172	1251	81	113	136	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5547280-5547754	Cluster_2426	Pocillopora_meandrina_HIv1___Sc0000006	5547280	5547754	475	652	264	0.0015337423312883436	-	GCUACUCAGCUGUGACUGU	104	277	170	28	59	57	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5732271-5732686	Cluster_2427	Pocillopora_meandrina_HIv1___Sc0000006	5732271	5732686	416	100	8	1.0	+	AUAGGGGCGAAAGACA	77	94	6	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5733785-5734203	Cluster_2428	Pocillopora_meandrina_HIv1___Sc0000006	5733785	5734203	419	689	30	0.001451378809869376	-	CUUUCUGGAGUUAAGGCUU	529	689	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5739668-5740104	Cluster_2429	Pocillopora_meandrina_HIv1___Sc0000006	5739668	5740104	437	583	215	0.9931389365351629	+	GCUGAUUGAAAACUUUUCCCAAUA	44	216	162	35	45	45	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5820601-5821030	Cluster_2430	Pocillopora_meandrina_HIv1___Sc0000006	5820601	5821030	430	430	70	1.0	+	UGCCUCAAAUCAUAAAAUUACUUGU	107	3	423	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5824415-5825515	Cluster_2431	Pocillopora_meandrina_HIv1___Sc0000006	5824415	5825515	1101	1215	380	0.994238683127572	+	UAACCUGUGAAAUAAAAAGAAUGAAGUUGAC	73	30	1128	2	6	18	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5830168-5831006	Cluster_2432	Pocillopora_meandrina_HIv1___Sc0000006	5830168	5831006	839	3249	543	0.9784549092028316	+	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUGG	494	63	3059	20	43	32	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5831468-5832293	Cluster_2433	Pocillopora_meandrina_HIv1___Sc0000006	5831468	5832293	826	1011	327	0.9990108803165183	+	UUGUCUGCUGUACUCUAACGAUUUGUUUC	64	7	980	8	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5832723-5834537	Cluster_2434	Pocillopora_meandrina_HIv1___Sc0000006	5832723	5834537	1815	10228	1642	0.9443684004692999	+	UGCAUCAAGCAGGAAAAAAAGACAAUGA	732	194	9379	70	112	164	309	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5834970-5835396	Cluster_2435	Pocillopora_meandrina_HIv1___Sc0000006	5834970	5835396	427	271	81	1.0	+	UCUGCCAGUCUUCUUGGACCUUGCCUGC	26	10	259	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5837604-5839281	Cluster_2436	Pocillopora_meandrina_HIv1___Sc0000006	5837604	5839281	1678	2196	686	0.9936247723132969	+	UGAGAUGUCACUAUUGAAUAUUUAACAAGA	177	61	2075	8	8	26	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5839523-5840406	Cluster_2437	Pocillopora_meandrina_HIv1___Sc0000006	5839523	5840406	884	1011	350	0.9950544015825915	+	UGACAUGCUUAGAAUUUUCAGCUAAAUUGA	147	14	974	2	2	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5840532-5841060	Cluster_2438	Pocillopora_meandrina_HIv1___Sc0000006	5840532	5841060	529	719	246	1.0	+	UGAUAAUAGAGAGACGUUAAUUGUAGCAGU	38	9	687	0	3	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5841188-5841618	Cluster_2439	Pocillopora_meandrina_HIv1___Sc0000006	5841188	5841618	431	779	92	1.0	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	178	13	761	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5841975-5842405	Cluster_2440	Pocillopora_meandrina_HIv1___Sc0000006	5841975	5842405	431	794	104	1.0	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	156	21	768	0	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5842763-5843542	Cluster_2441	Pocillopora_meandrina_HIv1___Sc0000006	5842763	5843542	780	7138	434	0.9985990473521995	+	UGCCACAUAGUGAAUUUUGCUGAACGUU	847	65	6942	97	7	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5843551-5843981	Cluster_2442	Pocillopora_meandrina_HIv1___Sc0000006	5843551	5843981	431	864	121	0.9953703703703703	+	UGAAAAGAACCUGAGACAGAACCACUAGACU	178	20	835	1	5	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5846808-5847473	Cluster_2443	Pocillopora_meandrina_HIv1___Sc0000006	5846808	5847473	666	4216	734	0.0377134724857685	-	UGAAGCGAUAUGAAAGAUCUUGAUGUG	259	67	4023	13	22	28	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5848646-5849073	Cluster_2444	Pocillopora_meandrina_HIv1___Sc0000006	5848646	5849073	428	221	113	0.7104072398190046	.	UGUUGCAAAGGCUAUGGCAAACACUCCGC	13	7	203	7	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5849772-5850691	Cluster_2445	Pocillopora_meandrina_HIv1___Sc0000006	5849772	5850691	920	781	252	0.8245838668373879	+	UACUGAUGGUUUGUCUUUAAACUGAAAUU	87	11	731	3	3	12	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5850813-5851241	Cluster_2446	Pocillopora_meandrina_HIv1___Sc0000006	5850813	5851241	429	266	124	0.22932330827067668	.	UCCCAGCGUAUGAACGACUCUCUUAUUUC	34	2	235	1	1	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5851721-5852501	Cluster_2447	Pocillopora_meandrina_HIv1___Sc0000006	5851721	5852501	781	324	97	0.9938271604938271	+	UGGACUUUGCUUCUUUUGCCAAUUGUGC	70	6	313	2	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5858323-5860151	Cluster_2448	Pocillopora_meandrina_HIv1___Sc0000006	5858323	5860151	1829	9068	1430	0.045544772827525365	-	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	2867	55	8748	23	50	72	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5860314-5860879	Cluster_2449	Pocillopora_meandrina_HIv1___Sc0000006	5860314	5860879	566	5895	486	0.9329940627650551	+	UGCAAUGGAUCUAGUACUAUCAAGUUC	2730	36	5722	10	62	32	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5860986-5861969	Cluster_2450	Pocillopora_meandrina_HIv1___Sc0000006	5860986	5861969	984	1306	426	0.7427258805513017	.	UGUUUUGUUUCUGAUUAACCUUGUGC	141	29	1199	21	6	18	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5863662-5865679	Cluster_2451	Pocillopora_meandrina_HIv1___Sc0000006	5863662	5865679	2018	22223	3631	0.0635827746028889	-	UGAGAGAAAUUUUUCUUUGAAAUCUGCAGG	1827	291	20851	130	196	277	478	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5866040-5868243	Cluster_2452	Pocillopora_meandrina_HIv1___Sc0000006	5866040	5868243	2204	5219	1760	0.19371527112473655	-	UGAGGAAUAUAUCAAAGAAGGUCGUGAUC	185	82	4872	83	31	64	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5872014-5873328	Cluster_2453	Pocillopora_meandrina_HIv1___Sc0000006	5872014	5873328	1315	6012	1141	0.916333998669328	+	UACUUCCAUGACUGGUUGAGGAUAGAUG	659	125	5311	41	52	241	242	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5875872-5877160	Cluster_2454	Pocillopora_meandrina_HIv1___Sc0000006	5875872	5877160	1289	3600	925	0.9247222222222222	+	UCAGCUCUUUCUAACUCUGCAAUUUGAGGU	246	38	3337	22	93	51	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5882690-5883488	Cluster_2455	Pocillopora_meandrina_HIv1___Sc0000006	5882690	5883488	799	7671	647	0.03245991396167384	-	UGCGUGUAAAAGCUGGUCUCAAGAACC	2103	39	7313	88	16	44	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5883592-5884926	Cluster_2456	Pocillopora_meandrina_HIv1___Sc0000006	5883592	5884926	1335	9921	991	0.7086987198871082	.	UGUUACUGUAGAUGGGGUUUCCCUAGC	2195	57	8764	18	76	71	935	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5884948-5885784	Cluster_2457	Pocillopora_meandrina_HIv1___Sc0000006	5884948	5885784	837	5249	825	0.4362735759192227	.	UUUUAUCUCAGGGAAAGCUGCAAAACUG	615	89	4585	50	69	222	234	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5889962-5890386	Cluster_2458	Pocillopora_meandrina_HIv1___Sc0000006	5889962	5890386	425	223	100	1.0	+	UGGUAUCUUCAGGGCUUCUGUCAUUU	34	6	204	0	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5890418-5890904	Cluster_2459	Pocillopora_meandrina_HIv1___Sc0000006	5890418	5890904	487	286	124	0.9895104895104895	+	UGGUCUUGAUUGCAGGAAGCAGGUGUUA	27	6	271	2	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5891469-5891892	Cluster_2460	Pocillopora_meandrina_HIv1___Sc0000006	5891469	5891892	424	163	72	1.0	+	UCCUCGCUGCAGCAUCUCUAAUUGUAUGGC	28	0	162	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5891955-5892383	Cluster_2461	Pocillopora_meandrina_HIv1___Sc0000006	5891955	5892383	429	177	96	0.9887005649717514	+	UUGGAUCACAGUUUGUUGCCUCGGACAGGCU	17	4	162	0	4	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5894350-5894781	Cluster_2462	Pocillopora_meandrina_HIv1___Sc0000006	5894350	5894781	432	323	101	0.02476780185758514	-	UGCUCGCUGACAAAGGAAACUCUCACG	54	26	223	1	6	53	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5896720-5897140	Cluster_2463	Pocillopora_meandrina_HIv1___Sc0000006	5896720	5897140	421	145	77	0.993103448275862	+	UGAUUUUGAAAACUCUGAUGGCUUUUG	16	5	137	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5901952-5902377	Cluster_2464	Pocillopora_meandrina_HIv1___Sc0000006	5901952	5902377	426	187	75	1.0	+	UGUGUAUCUUCUGAGUUUUGAGUUUGAGC	26	4	177	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5902988-5903417	Cluster_2465	Pocillopora_meandrina_HIv1___Sc0000006	5902988	5903417	430	228	94	0.9956140350877193	+	UGAAGACAAGGAGAUUGUUGAUGACGUCCGC	19	4	219	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5905245-5905671	Cluster_2466	Pocillopora_meandrina_HIv1___Sc0000006	5905245	5905671	427	182	84	0.978021978021978	+	UGGAUUUUCAAUUGAUUCUCGAAAUGUUUGG	28	4	175	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5905755-5906180	Cluster_2467	Pocillopora_meandrina_HIv1___Sc0000006	5905755	5906180	426	247	118	0.9878542510121457	+	UCUGACUGAUUACUGCUGUUUCCACUGC	26	8	234	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5907038-5907472	Cluster_2468	Pocillopora_meandrina_HIv1___Sc0000006	5907038	5907472	435	231	93	1.0	+	UCUUCAGACUUAACUUAGCUAUGAUCUCGA	31	6	224	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5908778-5909395	Cluster_2469	Pocillopora_meandrina_HIv1___Sc0000006	5908778	5909395	618	335	150	0.9940298507462687	+	UUUCCAUUGCUUGAACUUGCCGGUUUU	27	11	310	0	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5910610-5911027	Cluster_2470	Pocillopora_meandrina_HIv1___Sc0000006	5910610	5911027	418	280	180	0.08928571428571429	-	UCAAAGUCCAGUAUCCUCUGCGAGUCAGA	11	60	114	11	16	38	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5917575-5918268	Cluster_2471	Pocillopora_meandrina_HIv1___Sc0000006	5917575	5918268	694	1184	201	0.987331081081081	+	UAGAUUGGAGGAAACUCUUUCUGGCGGG	301	17	1126	1	9	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5920058-5921204	Cluster_2472	Pocillopora_meandrina_HIv1___Sc0000006	5920058	5921204	1147	931	387	0.8238453276047261	+	UACCACGUCUAGCUCCUCGUGCUCGCU	41	10	826	4	16	31	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5922443-5923663	Cluster_2473	Pocillopora_meandrina_HIv1___Sc0000006	5922443	5923663	1221	2099	513	0.8165793234873749	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	481	14	1979	9	8	29	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5926604-5927194	Cluster_2474	Pocillopora_meandrina_HIv1___Sc0000006	5926604	5927194	591	675	272	0.7125925925925926	.	UAAAUUGCCAUGUCUAGUAGACCUAUU	33	14	619	7	9	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5927210-5927773	Cluster_2475	Pocillopora_meandrina_HIv1___Sc0000006	5927210	5927773	564	593	242	0.7942664418212478	.	UAAUUUAUCCAUGUAUUCUUGAAGACA	36	8	503	6	23	34	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5928631-5929440	Cluster_2476	Pocillopora_meandrina_HIv1___Sc0000006	5928631	5929440	810	413	232	0.9152542372881356	+	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	18	6	377	1	2	10	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5929820-5930249	Cluster_2477	Pocillopora_meandrina_HIv1___Sc0000006	5929820	5930249	430	189	44	0.9629629629629629	+	UGCAAAACCAUGUACAGUCGAACCUUGAUU	44	55	130	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5930401-5930838	Cluster_2478	Pocillopora_meandrina_HIv1___Sc0000006	5930401	5930838	438	1830	194	0.9989071038251366	+	UCCAUUCUGCUCCCACGGUUUGAGGACUUG	369	5	1822	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5931431-5931846	Cluster_2479	Pocillopora_meandrina_HIv1___Sc0000006	5931431	5931846	416	227	110	0.9911894273127754	+	UGUCUUUAACUCUGCCCUAACAAUUCAGAA	21	22	191	6	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5932642-5933123	Cluster_2480	Pocillopora_meandrina_HIv1___Sc0000006	5932642	5933123	482	263	106	0.9961977186311787	+	UCUGCAACGGACUUCUAAGGGGUAAAGGC	42	2	255	0	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5934311-5935756	Cluster_2481	Pocillopora_meandrina_HIv1___Sc0000006	5934311	5935756	1446	1215	519	0.9958847736625515	+	UAUCUUGAACUCUGUAAUGAUGGGUGAC	43	46	1114	7	23	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5936238-5937077	Cluster_2482	Pocillopora_meandrina_HIv1___Sc0000006	5936238	5937077	840	973	386	0.9969167523124358	+	UCUUCGUCCUGGAACCAUUUCCUCAUUGA	44	16	935	4	4	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5940921-5941459	Cluster_2483	Pocillopora_meandrina_HIv1___Sc0000006	5940921	5941459	539	8383	407	0.9998807109626625	+	UGUGUCGAGCUUCUCUUGUAGCAGGAGU	3198	92	8152	3	70	33	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5941835-5942272	Cluster_2484	Pocillopora_meandrina_HIv1___Sc0000006	5941835	5942272	438	6761	269	0.9982251146280136	+	UUCUGCUGUUUUGGGCUUGCUUUGCCAUC	3731	54	6649	6	15	20	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5947100-5947529	Cluster_2485	Pocillopora_meandrina_HIv1___Sc0000006	5947100	5947529	430	306	35	1.0	+	UCAAACCUUGGCUUGAAUUACCUAUGCACA	186	1	305	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5948137-5948642	Cluster_2486	Pocillopora_meandrina_HIv1___Sc0000006	5948137	5948642	506	6800	374	0.9988235294117647	+	UGCUUGAUCCUGCUGUAUCUUUUGAAGGGC	2304	10	6748	3	11	19	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5948648-5949058	Cluster_2487	Pocillopora_meandrina_HIv1___Sc0000006	5948648	5949058	411	200	110	0.99	+	UGUCUGAUCUUCUCCUAGAAACAUUUUAGC	10	3	191	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5952244-5952687	Cluster_2488	Pocillopora_meandrina_HIv1___Sc0000006	5952244	5952687	444	268	81	0.1044776119402985	-	ACGUGUAAGAUCAAGGAAGACAUGUUGAUU	58	12	231	1	3	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5956512-5956929	Cluster_2489	Pocillopora_meandrina_HIv1___Sc0000006	5956512	5956929	418	263	155	0.9961977186311787	+	UCUAGAUUCUGGAUUUGCCUGUUCGUCU	18	2	245	3	7	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5959619-5960273	Cluster_2490	Pocillopora_meandrina_HIv1___Sc0000006	5959619	5960273	655	1113	208	0.9245283018867925	+	UAAGUUGAGAGGUCAUAGUAACAUUAGC	132	9	1015	5	6	16	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5960956-5961384	Cluster_2491	Pocillopora_meandrina_HIv1___Sc0000006	5960956	5961384	429	177	56	1.0	+	UAGGAUUUCUGUAGCUUGACAAGUUGUAG	45	3	167	3	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5962707-5963125	Cluster_2492	Pocillopora_meandrina_HIv1___Sc0000006	5962707	5963125	419	82	24	1.0	+	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	21	1	81	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5970547-5971262	Cluster_2493	Pocillopora_meandrina_HIv1___Sc0000006	5970547	5971262	716	312	138	0.9935897435897436	+	UUCAACGUUAUUUGUCUGGGUCUUUACAGC	33	17	291	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5973250-5973678	Cluster_2494	Pocillopora_meandrina_HIv1___Sc0000006	5973250	5973678	429	317	57	0.9936908517350158	+	UGGGUCUGUGAUUAUGAAGAUGAAAUUC	101	9	303	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5975047-5975816	Cluster_2495	Pocillopora_meandrina_HIv1___Sc0000006	5975047	5975816	770	1032	286	0.999031007751938	+	UGUAAAAUCUUUUAGGUCUGGCCCUUAUG	128	8	1004	0	3	1	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5977131-5977728	Cluster_2496	Pocillopora_meandrina_HIv1___Sc0000006	5977131	5977728	598	471	162	0.9978768577494692	+	UGUAAACAUCUAAUAACUCCUGCGGAGCAGC	65	9	446	0	5	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5977885-5978419	Cluster_2497	Pocillopora_meandrina_HIv1___Sc0000006	5977885	5978419	535	343	115	0.9795918367346939	+	UCAAACAUUCUUCUGCUCGACUUACUGGC	43	10	319	4	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5978605-5979573	Cluster_2498	Pocillopora_meandrina_HIv1___Sc0000006	5978605	5979573	969	4385	585	0.9778791334093501	+	UCUACCUUAAAUCCCAACUGAUUGCUUUGU	649	106	3896	294	31	20	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5979723-5980153	Cluster_2499	Pocillopora_meandrina_HIv1___Sc0000006	5979723	5980153	431	656	95	0.9939024390243902	+	UGUGUGUUCUAACAGGGUGAUUACUAUAUC	273	41	594	1	2	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5982239-5982887	Cluster_2500	Pocillopora_meandrina_HIv1___Sc0000006	5982239	5982887	649	1051	335	0.7564224548049476	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	74	11	948	2	8	40	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5982943-5983370	Cluster_2501	Pocillopora_meandrina_HIv1___Sc0000006	5982943	5983370	428	392	62	0.002551020408163265	-	ACUGAGAUUCUGGCUGGAUUGUUCCACU	166	0	391	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5983706-5984819	Cluster_2502	Pocillopora_meandrina_HIv1___Sc0000006	5983706	5984819	1114	16805	1636	0.20946146980065455	.	AAAGAUCUGAACCGACGAAUAGUGUAUGGC	2833	135	15541	37	85	211	796	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:5990661-5991084	Cluster_2503	Pocillopora_meandrina_HIv1___Sc0000006	5990661	5991084	424	129	59	0.9689922480620154	+	GAUGAAUGGAGAAACGAUAUGACAAC	28	3	71	2	6	6	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6006867-6007294	Cluster_2504	Pocillopora_meandrina_HIv1___Sc0000006	6006867	6007294	428	371	182	1.0	+	UGAUGCUUUCUAGAUGCUGUAACCAAAAC	28	6	350	0	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6007533-6008271	Cluster_2505	Pocillopora_meandrina_HIv1___Sc0000006	6007533	6008271	739	839	366	0.9952324195470799	+	UGUGUCUUGUUGUAACAAUUGUUGCUUUC	43	24	785	1	3	9	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6008960-6010382	Cluster_2506	Pocillopora_meandrina_HIv1___Sc0000006	6008960	6010382	1423	2094	796	0.9961795606494747	+	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	122	16	2034	4	14	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6010447-6011701	Cluster_2507	Pocillopora_meandrina_HIv1___Sc0000006	6010447	6011701	1255	7194	1205	0.9726160689463442	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1468	52	6827	26	60	102	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6012871-6014174	Cluster_2508	Pocillopora_meandrina_HIv1___Sc0000006	6012871	6014174	1304	1400	453	0.995	+	UGUAUACGUAGUGUCCGAUCUAAAUCCUGA	120	22	1363	1	3	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6014790-6015197	Cluster_2509	Pocillopora_meandrina_HIv1___Sc0000006	6014790	6015197	408	233	148	0.9957081545064378	+	UCAUCUUCAGAAGACUUCUCCGACACUGC	16	2	227	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6016384-6016812	Cluster_2510	Pocillopora_meandrina_HIv1___Sc0000006	6016384	6016812	429	225	60	0.9155555555555556	+	UGGAUUUUAAAUCGUACAUACCUUCUUA	47	2	205	0	7	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6018479-6018907	Cluster_2511	Pocillopora_meandrina_HIv1___Sc0000006	6018479	6018907	429	389	152	0.7737789203084833	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	102	4	352	2	17	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6019579-6022030	Cluster_2512	Pocillopora_meandrina_HIv1___Sc0000006	6019579	6022030	2452	11925	3023	0.960922431865828	+	UGAGGACUUUUCAAAUUUAGCUACAGAUU	484	167	10918	71	85	154	530	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6023232-6024969	Cluster_2513	Pocillopora_meandrina_HIv1___Sc0000006	6023232	6024969	1738	2726	1087	0.9578136463683052	+	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	87	28	2578	11	23	44	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6031801-6032221	Cluster_2514	Pocillopora_meandrina_HIv1___Sc0000006	6031801	6032221	421	183	69	0.9508196721311475	+	UCAUUGCGUUGCAUCUUCAGACUUAACUUA	22	13	165	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6032361-6032926	Cluster_2515	Pocillopora_meandrina_HIv1___Sc0000006	6032361	6032926	566	427	197	0.8946135831381733	+	UGUGGUAGACUUGUUUUUGACAUGGCA	28	11	378	4	4	10	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6042598-6043626	Cluster_2516	Pocillopora_meandrina_HIv1___Sc0000006	6042598	6043626	1029	579	194	0.9930915371329879	+	UCGUUUGUUCCGAGGAUAAGAUGUACA	86	14	557	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6044864-6045288	Cluster_2517	Pocillopora_meandrina_HIv1___Sc0000006	6044864	6045288	425	155	69	1.0	+	UAGGUUAUUGGCAGUGUCUCUUCGAAAAGA	27	5	142	1	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6045497-6046053	Cluster_2518	Pocillopora_meandrina_HIv1___Sc0000006	6045497	6046053	557	439	126	0.9977220956719818	+	CUCUGCUGACUGCAGGACCUUCCUUGC	130	4	422	1	0	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6067017-6067447	Cluster_2519	Pocillopora_meandrina_HIv1___Sc0000006	6067017	6067447	431	878	179	0.9988610478359908	+	UUCCUGUACGAUAACACUUAGGUUGCGCA	134	101	744	9	11	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6070242-6070679	Cluster_2520	Pocillopora_meandrina_HIv1___Sc0000006	6070242	6070679	438	833	278	0.9567827130852341	+	UGCGUGACGAUCAAGAACUUGAGAGAGUGU	135	9	789	3	6	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6071058-6072232	Cluster_2521	Pocillopora_meandrina_HIv1___Sc0000006	6071058	6072232	1175	2529	557	0.6247528667457493	.	GAUCUCUUGAAAUGUUCGGAAUUAUGUGG	245	38	2398	33	5	27	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6120475-6121105	Cluster_2522	Pocillopora_meandrina_HIv1___Sc0000006	6120475	6121105	631	1069	250	0.006548175865294668	-	UACUCUUCGCCAGACGUUUUCCGUACCGAU	148	22	1021	6	9	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6121458-6121887	Cluster_2523	Pocillopora_meandrina_HIv1___Sc0000006	6121458	6121887	430	239	73	0.0	-	UGCGAUUGAAGCUGCUGGGAGACACAAGUG	45	8	216	5	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6207674-6208092	Cluster_2524	Pocillopora_meandrina_HIv1___Sc0000006	6207674	6208092	419	725	37	0.011034482758620689	-	AACUUUUGACGGUGGGU	179	725	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6278811-6279259	Cluster_2525	Pocillopora_meandrina_HIv1___Sc0000006	6278811	6279259	449	1013	159	0.39684106614017767	.	UUCUAGCUCGACUUCACGCU	234	505	65	113	301	25	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6286308-6286741	Cluster_2526	Pocillopora_meandrina_HIv1___Sc0000006	6286308	6286741	434	720	217	0.005555555555555556	-	UGUGUUGCAAUGGCGACGAACAUUG	141	86	553	21	13	15	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6499330-6499750	Cluster_2527	Pocillopora_meandrina_HIv1___Sc0000006	6499330	6499750	421	98	52	0.0	-	UCAGUAAGGAUGGAAACUCUUGGA	12	9	43	5	5	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6643445-6643859	Cluster_2528	Pocillopora_meandrina_HIv1___Sc0000006	6643445	6643859	415	213	2	1.0	+	AGGAGAACGUAGGGU	212	213	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6686048-6686463	Cluster_2529	Pocillopora_meandrina_HIv1___Sc0000006	6686048	6686463	416	106	16	1.0	+	GUGUGUCUCUCUGUCU	62	105	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6768800-6769851	Cluster_2530	Pocillopora_meandrina_HIv1___Sc0000006	6768800	6769851	1052	713	370	0.7601683029453016	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	24	8	652	3	1	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6770111-6770541	Cluster_2531	Pocillopora_meandrina_HIv1___Sc0000006	6770111	6770541	431	617	219	0.9027552674230146	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	74	10	524	2	0	13	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6812246-6812661	Cluster_2532	Pocillopora_meandrina_HIv1___Sc0000006	6812246	6812661	416	106	53	0.9905660377358491	+	UCCCACAUGGUCUAGUGGUUAGGAUUCA	16	27	69	3	3	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6838768-6839198	Cluster_2533	Pocillopora_meandrina_HIv1___Sc0000006	6838768	6839198	431	868	131	0.0	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	159	227	620	4	12	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6858520-6858950	Cluster_2534	Pocillopora_meandrina_HIv1___Sc0000006	6858520	6858950	431	481	104	1.0	+	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	96	118	351	2	7	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6875416-6875831	Cluster_2535	Pocillopora_meandrina_HIv1___Sc0000006	6875416	6875831	416	87	9	0.0	-	CUUAUGAAUGGUGGAUU	40	87	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:6907945-6908359	Cluster_2536	Pocillopora_meandrina_HIv1___Sc0000006	6907945	6908359	415	166	46	0.7228915662650602	.	CGCCGCCGUCGCACA	53	140	10	3	5	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7024118-7024547	Cluster_2537	Pocillopora_meandrina_HIv1___Sc0000006	7024118	7024547	430	265	55	0.0	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	87	0	263	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7083119-7083521	Cluster_2538	Pocillopora_meandrina_HIv1___Sc0000006	7083119	7083521	403	189	138	0.0	-	CUUGUUGGAAAAUAUGGCGGU	8	42	75	23	21	20	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7121573-7121989	Cluster_2539	Pocillopora_meandrina_HIv1___Sc0000006	7121573	7121989	417	154	28	0.8831168831168831	+	CUUUGGUGGAGAUGGAU	33	136	12	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7261372-7261772	Cluster_2540	Pocillopora_meandrina_HIv1___Sc0000006	7261372	7261772	401	163	133	0.0	-	GUAUUUUAAAUUGUGAACGGUUU	3	33	57	14	20	21	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7262299-7262700	Cluster_2541	Pocillopora_meandrina_HIv1___Sc0000006	7262299	7262700	402	223	176	0.004484304932735426	-	GGAAGUUGGCAGUGAACA	5	71	87	16	17	15	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7264399-7264807	Cluster_2542	Pocillopora_meandrina_HIv1___Sc0000006	7264399	7264807	409	380	290	0.002631578947368421	-	CACCGAAGGAGCCGAAUUGGUAGACU	5	119	147	30	25	29	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7265080-7265496	Cluster_2543	Pocillopora_meandrina_HIv1___Sc0000006	7265080	7265496	417	157	131	0.0	-	UUCAUCUUCAGGCUGGCC	3	55	63	7	14	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7496273-7496769	Cluster_2544	Pocillopora_meandrina_HIv1___Sc0000006	7496273	7496769	497	575	182	0.6469565217391304	.	UGCGAUUACAGAGGUGCGUUGGAACUCC	144	17	527	4	5	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7599358-7599934	Cluster_2545	Pocillopora_meandrina_HIv1___Sc0000006	7599358	7599934	577	495	228	0.9353535353535354	+	UGUUUGUAGCACGUCCAGUCUGUUGGAGC	30	44	427	1	3	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7600647-7601066	Cluster_2546	Pocillopora_meandrina_HIv1___Sc0000006	7600647	7601066	420	156	96	0.9935897435897436	+	UGUGUGUUGGAUCCGAGCUCGUAUACACC	8	10	140	1	2	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7637910-7638338	Cluster_2547	Pocillopora_meandrina_HIv1___Sc0000006	7637910	7638338	429	142	52	0.014084507042253521	-	UGUAUCUUCAGUAUCUUCGUCGCCAGAGC	42	4	134	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7697231-7697658	Cluster_2548	Pocillopora_meandrina_HIv1___Sc0000006	7697231	7697658	428	185	73	0.0	-	UUUGAUUGACGUACGGUAUUUGAGACGC	24	3	174	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7786884-7787312	Cluster_2549	Pocillopora_meandrina_HIv1___Sc0000006	7786884	7787312	429	341	225	0.011730205278592375	-	CUCUUGUUGACGGUCUGAAGAGAGCAACA	47	86	164	27	22	24	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7790782-7791185	Cluster_2550	Pocillopora_meandrina_HIv1___Sc0000006	7790782	7791185	404	163	117	0.03680981595092025	-	UCAAGGUCAUCAUGCAGAAC	6	56	69	8	11	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7906356-7906770	Cluster_2551	Pocillopora_meandrina_HIv1___Sc0000006	7906356	7906770	415	90	11	0.03333333333333333	-	UGGCCCAGCUGUGAU	74	88	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7908829-7909247	Cluster_2552	Pocillopora_meandrina_HIv1___Sc0000006	7908829	7909247	419	164	80	0.0	-	GAUAUUCUUGAUUCUGAAAACA	16	73	39	6	26	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7910927-7911409	Cluster_2553	Pocillopora_meandrina_HIv1___Sc0000006	7910927	7911409	483	2806	476	0.0003563791874554526	-	CCAUGUUGGUGUGGUCUGAUGAACUGAAAGU	205	542	1522	244	263	132	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7912046-7912475	Cluster_2554	Pocillopora_meandrina_HIv1___Sc0000006	7912046	7912475	430	440	109	0.0	-	UUCAGUGUUGAACUGUUCACAUUCUGAAAA	110	75	325	23	8	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7912843-7913321	Cluster_2555	Pocillopora_meandrina_HIv1___Sc0000006	7912843	7913321	479	3063	405	0.001632386549134835	-	CCUAAUGAUGUUUGGUCUGAUGAACUGAAA	318	210	2410	87	65	88	203	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:7973844-7974259	Cluster_2556	Pocillopora_meandrina_HIv1___Sc0000006	7973844	7974259	416	220	62	0.9636363636363636	+	UGUAUCCCAACCAAGU	136	139	67	1	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8173663-8174078	Cluster_2557	Pocillopora_meandrina_HIv1___Sc0000006	8173663	8174078	416	238	63	0.9747899159663865	+	UGUAUCCCAACCAAGU	148	154	76	3	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8391070-8391499	Cluster_2558	Pocillopora_meandrina_HIv1___Sc0000006	8391070	8391499	430	2108	101	0.0004743833017077799	-	UUCUCUCGAACAUUUUACUAUUUAGGUACC	700	14	1957	2	4	128	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8533930-8534360	Cluster_2559	Pocillopora_meandrina_HIv1___Sc0000006	8533930	8534360	431	139	50	0.03597122302158273	-	UCGAUUCCGCGAUGACUACAAUACGUUCUGC	45	4	131	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8556069-8556565	Cluster_2560	Pocillopora_meandrina_HIv1___Sc0000006	8556069	8556565	497	316	225	0.0	-	GGCAGAACUAUGUAAGAACAU	10	98	116	30	18	30	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8710636-8711050	Cluster_2561	Pocillopora_meandrina_HIv1___Sc0000006	8710636	8711050	415	142	23	0.9295774647887324	+	UGAGACUUGAAGCGU	54	133	4	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8844897-8845324	Cluster_2562	Pocillopora_meandrina_HIv1___Sc0000006	8844897	8845324	428	431	23	0.9976798143851509	+	UCGGUUCUUAAAAAAAAAAAAAAAAAA	94	2	380	5	3	7	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:8888821-8889249	Cluster_2563	Pocillopora_meandrina_HIv1___Sc0000006	8888821	8889249	429	92	10	0.010869565217391304	-	UGAUAAUCCAAAUUCUUGCGCCUACACAUU	72	2	88	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9039512-9039983	Cluster_2564	Pocillopora_meandrina_HIv1___Sc0000006	9039512	9039983	472	871	111	0.9977037887485649	+	GCCCGGUUAGCUCAGUC	258	604	242	8	2	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9046560-9046990	Cluster_2565	Pocillopora_meandrina_HIv1___Sc0000006	9046560	9046990	431	3290	255	0.001519756838905775	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	815	972	2221	8	54	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9050405-9050859	Cluster_2566	Pocillopora_meandrina_HIv1___Sc0000006	9050405	9050859	455	533	77	1.0	+	GGUCCGUUAGCUCAG	143	341	98	20	16	24	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9100122-9100616	Cluster_2567	Pocillopora_meandrina_HIv1___Sc0000006	9100122	9100616	495	4400	1074	0.003181818181818182	-	GUUUAUCCGAGGCGCGGUUAUUGCUGA	135	1811	1377	285	257	281	389	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9100951-9101407	Cluster_2568	Pocillopora_meandrina_HIv1___Sc0000006	9100951	9101407	457	401	136	1.0	+	UAUUGACUUUUAAAUUUCUCCAGAACGGUG	35	15	338	7	7	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9202498-9202981	Cluster_2569	Pocillopora_meandrina_HIv1___Sc0000006	9202498	9202981	484	3564	332	0.9985970819304153	+	UGCCCAAUGAUUAUCUAUGUUGAACACU	518	1042	2154	56	124	67	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9311554-9311977	Cluster_2570	Pocillopora_meandrina_HIv1___Sc0000006	9311554	9311977	424	339	49	0.0029498525073746312	-	UGUCUAUUCCAGGUAACCUCUGAU	167	10	48	13	3	31	234	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9331637-9332053	Cluster_2571	Pocillopora_meandrina_HIv1___Sc0000006	9331637	9332053	417	187	37	1.0	+	AUCGGCCGUGGAUUGC	28	182	3	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9416139-9416555	Cluster_2572	Pocillopora_meandrina_HIv1___Sc0000006	9416139	9416555	417	2240	67	0.0004464285714285714	-	UUUGUUCUAAGAUUUGU	1008	2226	0	14	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9517732-9518155	Cluster_2573	Pocillopora_meandrina_HIv1___Sc0000006	9517732	9518155	424	462	26	1.0	+	AGUUUUGGUGUUCUUCUGUGUG	207	26	62	3	310	33	28	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9565153-9565579	Cluster_2574	Pocillopora_meandrina_HIv1___Sc0000006	9565153	9565579	427	194	99	0.8608247422680413	+	UGAGUCGAGGUUAUUCACAAUACGAGC	38	7	170	0	2	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9632564-9632985	Cluster_2575	Pocillopora_meandrina_HIv1___Sc0000006	9632564	9632985	422	122	19	0.9918032786885246	+	AGUUUUGGUGUCCUCCUCUGUG	42	2	48	3	65	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9708114-9708566	Cluster_2576	Pocillopora_meandrina_HIv1___Sc0000006	9708114	9708566	453	322	139	0.9130434782608695	+	AGUUGACAUAUUGACUGGUACAAACAAGGG	39	25	203	7	11	19	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9738230-9738656	Cluster_2577	Pocillopora_meandrina_HIv1___Sc0000006	9738230	9738656	427	281	111	0.7508896797153025	.	UUGGAACGUGUUGCUGAACGCUUGCU	34	30	240	3	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9755872-9756300	Cluster_2578	Pocillopora_meandrina_HIv1___Sc0000006	9755872	9756300	429	271	25	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	94	0	268	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9769645-9770073	Cluster_2579	Pocillopora_meandrina_HIv1___Sc0000006	9769645	9770073	429	279	31	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	100	0	273	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9790713-9791956	Cluster_2580	Pocillopora_meandrina_HIv1___Sc0000006	9790713	9791956	1244	3414	907	0.046280023432923256	-	UCUUCGCUGAUUUCUUCCCACAGGGACU	258	17	3343	4	6	7	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9792784-9793199	Cluster_2581	Pocillopora_meandrina_HIv1___Sc0000006	9792784	9793199	416	188	108	0.6117021276595744	.	UGCAAACUCGUCUGUAGACUCUGUACA	24	6	179	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9808992-9809421	Cluster_2582	Pocillopora_meandrina_HIv1___Sc0000006	9808992	9809421	430	272	37	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	90	1	266	1	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9830659-9831089	Cluster_2583	Pocillopora_meandrina_HIv1___Sc0000006	9830659	9831089	431	351	176	0.9743589743589743	+	UUGGAACUUCAGCUGUGAGACGCAGG	20	7	316	1	2	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9833547-9833990	Cluster_2584	Pocillopora_meandrina_HIv1___Sc0000006	9833547	9833990	444	869	196	0.5822784810126582	.	CCUGAUCGUAAAGACAAACUGCGUG	161	7	765	6	4	20	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9837502-9837929	Cluster_2585	Pocillopora_meandrina_HIv1___Sc0000006	9837502	9837929	428	189	49	0.9470899470899471	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	42	6	177	2	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9852912-9853356	Cluster_2586	Pocillopora_meandrina_HIv1___Sc0000006	9852912	9853356	445	377	117	0.129973474801061	-	UGAGACAGUACACACGAUUUGAUAU	49	2	360	1	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9873510-9873938	Cluster_2587	Pocillopora_meandrina_HIv1___Sc0000006	9873510	9873938	429	258	34	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	97	0	257	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9887216-9887645	Cluster_2588	Pocillopora_meandrina_HIv1___Sc0000006	9887216	9887645	430	288	42	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	109	1	280	1	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9909109-9909538	Cluster_2589	Pocillopora_meandrina_HIv1___Sc0000006	9909109	9909538	430	293	44	0.9965870307167235	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	101	3	285	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:9926159-9926587	Cluster_2590	Pocillopora_meandrina_HIv1___Sc0000006	9926159	9926587	429	268	31	1.0	+	AGUUUUGGUGUCCUCCUCUGUGAGAUGUG	104	0	264	0	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10292062-10292488	Cluster_2591	Pocillopora_meandrina_HIv1___Sc0000006	10292062	10292488	427	222	34	0.9684684684684685	+	UGAACUACUGCUCGUACUCUAGAUAGG	120	42	169	4	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10378721-10379135	Cluster_2592	Pocillopora_meandrina_HIv1___Sc0000006	10378721	10379135	415	224	21	0.026785714285714284	-	AUGUCGGCUCUUCCA	96	218	5	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10393246-10393675	Cluster_2593	Pocillopora_meandrina_HIv1___Sc0000006	10393246	10393675	430	213	54	0.9953051643192489	+	UGCAAAGAUGUCAGUCAAGAAUAGCCGAGC	75	4	206	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10460853-10461280	Cluster_2594	Pocillopora_meandrina_HIv1___Sc0000006	10460853	10461280	428	208	97	0.7980769230769231	.	UGAGACAUUUUGAGACACUCGUGAGACA	23	7	176	0	2	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10650635-10651049	Cluster_2595	Pocillopora_meandrina_HIv1___Sc0000006	10650635	10651049	415	89	33	0.0	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUUG	14	1	86	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10713315-10713741	Cluster_2596	Pocillopora_meandrina_HIv1___Sc0000006	10713315	10713741	427	137	48	0.9708029197080292	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	38	1	133	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10793624-10794051	Cluster_2597	Pocillopora_meandrina_HIv1___Sc0000006	10793624	10794051	428	95	31	0.06315789473684211	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	35	4	90	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10813242-10813666	Cluster_2598	Pocillopora_meandrina_HIv1___Sc0000006	10813242	10813666	425	143	63	0.9440559440559441	+	UGUUUACUUUCUUUACAACUUCGGAUACGGG	28	0	138	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10896001-10896432	Cluster_2599	Pocillopora_meandrina_HIv1___Sc0000006	10896001	10896432	432	2817	136	0.011714589989350373	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2103	15	2767	19	8	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:10969065-10969550	Cluster_2600	Pocillopora_meandrina_HIv1___Sc0000006	10969065	10969550	486	252	98	0.42063492063492064	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	40	12	228	1	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11034948-11035388	Cluster_2601	Pocillopora_meandrina_HIv1___Sc0000006	11034948	11035388	441	255	136	1.0	+	GCUGAUUGAAAACUUUUCCCAAUA	18	145	33	16	15	15	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11092821-11093342	Cluster_2602	Pocillopora_meandrina_HIv1___Sc0000006	11092821	11093342	522	201	58	0.04477611940298507	-	UCAACAUGUCUUCCUUUGUCUUACACGUG	42	1	199	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11121673-11122194	Cluster_2603	Pocillopora_meandrina_HIv1___Sc0000006	11121673	11122194	522	213	63	0.056338028169014086	-	UCAACAUGUCUUCCUUUGUCUUACACGUG	51	0	209	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11148434-11149390	Cluster_2604	Pocillopora_meandrina_HIv1___Sc0000006	11148434	11149390	957	2000	318	0.022	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	355	16	1915	1	3	47	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11166873-11167506	Cluster_2605	Pocillopora_meandrina_HIv1___Sc0000006	11166873	11167506	634	7614	548	0.07052797478329394	-	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	3974	57	7378	20	9	40	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11167824-11168374	Cluster_2606	Pocillopora_meandrina_HIv1___Sc0000006	11167824	11168374	551	215	82	0.08372093023255814	-	UAUACUCCAAAGGUUCUGAAAACGAAUG	37	4	191	1	5	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11206362-11206836	Cluster_2607	Pocillopora_meandrina_HIv1___Sc0000006	11206362	11206836	475	8012	781	0.9888916625062406	+	UCCCAUAUGGUCUAGUGGUUAGGAUCCGGC	2992	1044	6613	110	113	81	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11371010-11371535	Cluster_2608	Pocillopora_meandrina_HIv1___Sc0000006	11371010	11371535	526	654	232	0.154434250764526	-	UGUAAGAUCUGUAGCCUUGGUUUGCCGAC	87	51	538	11	10	17	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11373785-11374213	Cluster_2609	Pocillopora_meandrina_HIv1___Sc0000006	11373785	11374213	429	343	142	0.0	-	UCUUUCUUAAAACGGAACGUGUACUUGAA	36	7	324	3	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11374488-11374890	Cluster_2610	Pocillopora_meandrina_HIv1___Sc0000006	11374488	11374890	403	198	89	0.020202020202020204	-	CGCAGCGCGUGCCUCC	44	48	142	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11375457-11375959	Cluster_2611	Pocillopora_meandrina_HIv1___Sc0000006	11375457	11375959	503	1122	282	0.006238859180035651	-	UCCGACUCGUGCGACACGACAUCUCUUGAU	148	10	1092	2	2	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11376313-11378491	Cluster_2612	Pocillopora_meandrina_HIv1___Sc0000006	11376313	11378491	2179	112805	3139	0.004086698284650503	-	UGAUCUUCUUGAAUUUGCCCAUUUACAAUA	26498	487	110324	87	191	786	930	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11378588-11379259	Cluster_2613	Pocillopora_meandrina_HIv1___Sc0000006	11378588	11379259	672	1820	313	0.0038461538461538464	-	UGAUUCUUUGACAGUUAACCCUAGUAG	208	30	1569	76	26	107	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11380054-11380801	Cluster_2614	Pocillopora_meandrina_HIv1___Sc0000006	11380054	11380801	748	2327	489	0.011602922217447357	-	UCAAGAUCUUCCUCUUUGUCGUACCCGGA	434	25	2216	5	18	36	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11380829-11381266	Cluster_2615	Pocillopora_meandrina_HIv1___Sc0000006	11380829	11381266	438	393	180	0.07633587786259542	-	UGCUCAUAAUUGUGUGAACCUCAGACACCC	31	13	353	0	23	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11381692-11382373	Cluster_2616	Pocillopora_meandrina_HIv1___Sc0000006	11381692	11382373	682	494	195	0.004048582995951417	-	UGGCCAUUCAUCUAUUGAAAUGAACUUCGAU	124	27	451	0	4	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11384910-11385866	Cluster_2617	Pocillopora_meandrina_HIv1___Sc0000006	11384910	11385866	957	1163	415	0.005159071367153913	-	UCUGAUUUGGUAAUUGACUUGGCUGGUCC	58	55	1037	3	17	18	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11385947-11386367	Cluster_2618	Pocillopora_meandrina_HIv1___Sc0000006	11385947	11386367	421	134	53	0.007462686567164179	-	UCUUGAAAUUCUAGACUCUUGGAAAUGCA	55	3	129	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11389023-11390063	Cluster_2619	Pocillopora_meandrina_HIv1___Sc0000006	11389023	11390063	1041	6805	746	0.01337252020573108	-	UGCACUCUUUCCUUGAGAAGUUCCUGGAA	2619	150	6495	32	24	23	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11390733-11391386	Cluster_2620	Pocillopora_meandrina_HIv1___Sc0000006	11390733	11391386	654	1883	358	0.010621348911311737	-	UAAAAUCCGAAAAAUUCGAAAUGGAAGGCUG	1134	27	1807	7	5	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11393313-11393718	Cluster_2621	Pocillopora_meandrina_HIv1___Sc0000006	11393313	11393718	406	170	74	0.38235294117647056	.	UCCAUACAAACACAGUAAAUUGGCCGAA	15	3	154	1	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11430683-11431107	Cluster_2622	Pocillopora_meandrina_HIv1___Sc0000006	11430683	11431107	425	242	62	0.012396694214876033	-	CGGUGACAAAUAUCAACUAUGGCA	48	22	86	11	2	61	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11491586-11492016	Cluster_2623	Pocillopora_meandrina_HIv1___Sc0000006	11491586	11492016	431	850	92	0.9258823529411765	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	299	12	824	4	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11529776-11530193	Cluster_2624	Pocillopora_meandrina_HIv1___Sc0000006	11529776	11530193	418	167	13	0.0	-	CGGCUUGAAAAAAAAAAA	80	165	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11542083-11543575	Cluster_2625	Pocillopora_meandrina_HIv1___Sc0000006	11542083	11543575	1493	1294	535	0.09119010819165378	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	89	16	1225	2	3	18	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11544445-11544872	Cluster_2626	Pocillopora_meandrina_HIv1___Sc0000006	11544445	11544872	428	153	51	0.058823529411764705	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	68	0	146	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11544956-11545717	Cluster_2627	Pocillopora_meandrina_HIv1___Sc0000006	11544956	11545717	762	467	218	0.08779443254817987	-	UCCAAUCACACACAGUUCUCCUGCGGC	69	9	440	5	0	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11545757-11546165	Cluster_2628	Pocillopora_meandrina_HIv1___Sc0000006	11545757	11546165	409	219	115	0.0273972602739726	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	22	2	206	0	0	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11548311-11548726	Cluster_2629	Pocillopora_meandrina_HIv1___Sc0000006	11548311	11548726	416	975	53	0.9692307692307692	+	CCGUGUUGUAGGCUA	449	954	12	3	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11581144-11581561	Cluster_2630	Pocillopora_meandrina_HIv1___Sc0000006	11581144	11581561	418	540	47	0.009259259259259259	-	CCCGGGUCUCGGCACCA	309	538	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11672349-11672776	Cluster_2631	Pocillopora_meandrina_HIv1___Sc0000006	11672349	11672776	428	166	81	0.006024096385542169	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	36	18	129	12	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11677886-11678302	Cluster_2632	Pocillopora_meandrina_HIv1___Sc0000006	11677886	11678302	417	102	46	0.14705882352941177	-	UCAGAGCAAGAACGACCCCU	20	82	8	10	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11680009-11680439	Cluster_2633	Pocillopora_meandrina_HIv1___Sc0000006	11680009	11680439	431	310	144	0.04838709677419355	-	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	18	1	294	1	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11680461-11680882	Cluster_2634	Pocillopora_meandrina_HIv1___Sc0000006	11680461	11680882	422	224	127	0.13839285714285715	-	UAUCCUUAAUCUUGAUGGCUCGAGACGU	17	3	213	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11683540-11683967	Cluster_2635	Pocillopora_meandrina_HIv1___Sc0000006	11683540	11683967	428	77	21	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	27	0	75	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11760004-11760609	Cluster_2636	Pocillopora_meandrina_HIv1___Sc0000006	11760004	11760609	606	2877	294	0.9801876955161627	+	UGAACCGUGCCGAUCUGCUGCCCUUUGA	674	5	2840	1	9	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11762420-11762901	Cluster_2637	Pocillopora_meandrina_HIv1___Sc0000006	11762420	11762901	482	402	71	0.7313432835820896	.	UCCGAAGCCUCGUUUGUAGUCG	102	7	226	1	162	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11810098-11810513	Cluster_2638	Pocillopora_meandrina_HIv1___Sc0000006	11810098	11810513	416	155	12	0.0064516129032258064	-	UACCUGGUUGAUCCUA	65	154	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11811248-11811667	Cluster_2639	Pocillopora_meandrina_HIv1___Sc0000006	11811248	11811667	420	501	11	0.998003992015968	+	UUCCGAAUCUUCUAGUUAGC	386	454	1	37	8	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11830883-11831300	Cluster_2640	Pocillopora_meandrina_HIv1___Sc0000006	11830883	11831300	418	193	19	0.7512953367875648	.	GAUGGAUGGAGACUGCUU	101	188	4	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:11993972-11994632	Cluster_2641	Pocillopora_meandrina_HIv1___Sc0000006	11993972	11994632	661	1450	218	0.9986206896551724	+	UUACAUUUGCGACUUCUUCAGAUUGCGAGC	257	94	1240	11	29	47	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12057156-12057627	Cluster_2642	Pocillopora_meandrina_HIv1___Sc0000006	12057156	12057627	472	840	225	1.0	+	UGAGACGAAGCACACCGACAUUU	169	87	339	11	37	244	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12087516-12088787	Cluster_2643	Pocillopora_meandrina_HIv1___Sc0000006	12087516	12088787	1272	1237	489	0.07922392886014551	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	88	15	1176	11	4	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12088808-12089215	Cluster_2644	Pocillopora_meandrina_HIv1___Sc0000006	12088808	12089215	408	282	164	0.3333333333333333	.	CCCAAUACCAACUGUAGAUGAACUGCUAC	16	3	241	1	2	11	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12089658-12090084	Cluster_2645	Pocillopora_meandrina_HIv1___Sc0000006	12089658	12090084	427	120	45	0.058333333333333334	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	54	0	116	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12090168-12090647	Cluster_2646	Pocillopora_meandrina_HIv1___Sc0000006	12090168	12090647	480	316	120	0.06329113924050633	-	UCCAAUCACACACAGUUCUCCUGCGGC	62	1	300	1	0	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12090969-12091601	Cluster_2647	Pocillopora_meandrina_HIv1___Sc0000006	12090969	12091601	633	1550	386	0.041935483870967745	-	UGUUACCGGUCUUGCUAACCACUUGGA	383	11	1458	1	10	15	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12091623-12092038	Cluster_2648	Pocillopora_meandrina_HIv1___Sc0000006	12091623	12092038	416	205	96	0.02926829268292683	-	UAAGAUUUACACACUGAUCGACCAUGU	20	2	194	1	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12175321-12175749	Cluster_2649	Pocillopora_meandrina_HIv1___Sc0000006	12175321	12175749	429	661	67	0.0045385779122541605	-	UGAAGACUGGCCCUGAUAUCAUCAUAU	182	2	637	0	0	16	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12347661-12348078	Cluster_2650	Pocillopora_meandrina_HIv1___Sc0000006	12347661	12348078	418	177	13	0.9887005649717514	+	GAGGACAGUCGCAGCGCA	101	177	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12365265-12365693	Cluster_2651	Pocillopora_meandrina_HIv1___Sc0000006	12365265	12365693	429	105	30	0.009523809523809525	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	58	0	105	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12369619-12370050	Cluster_2652	Pocillopora_meandrina_HIv1___Sc0000006	12369619	12370050	432	406	158	0.08620689655172414	-	UGUUUUGGUGUGUUCAAGUAUCUUUGA	34	5	388	2	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12374555-12375050	Cluster_2653	Pocillopora_meandrina_HIv1___Sc0000006	12374555	12375050	496	2241	191	0.21686746987951808	.	UCCAUCUGUCAGAAAUCCAAACAUGUCUUC	825	1	2201	3	8	15	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12376022-12376452	Cluster_2654	Pocillopora_meandrina_HIv1___Sc0000006	12376022	12376452	431	713	64	0.028050490883590462	-	UGAAAUGACGAUCACUGAUGAAUCCUUUGUC	318	11	669	11	2	19	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12377153-12378553	Cluster_2655	Pocillopora_meandrina_HIv1___Sc0000006	12377153	12378553	1401	1129	330	0.283436669619132	.	UCUACUUUGUUGGAUUCACACUGGAUCUUGU	242	12	882	20	26	109	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12380733-12383184	Cluster_2656	Pocillopora_meandrina_HIv1___Sc0000006	12380733	12383184	2452	11925	3020	0.0450314465408805	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	455	152	10904	67	102	199	501	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12383856-12384400	Cluster_2657	Pocillopora_meandrina_HIv1___Sc0000006	12383856	12384400	545	471	210	0.18683651804670912	-	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	107	8	419	8	12	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12391128-12391714	Cluster_2658	Pocillopora_meandrina_HIv1___Sc0000006	12391128	12391714	587	483	220	0.4057971014492754	.	CAGGAAUGUAGUGCUGAACAACC	23	13	346	21	16	59	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12400733-12401399	Cluster_2659	Pocillopora_meandrina_HIv1___Sc0000006	12400733	12401399	667	3323	703	0.25880228708997893	.	UUUAUACCCAAUACGAUCUUAUCUCUGA	279	25	3155	9	14	59	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12401665-12402081	Cluster_2660	Pocillopora_meandrina_HIv1___Sc0000006	12401665	12402081	417	260	140	0.11923076923076924	-	UGAACUUAACGACACCUAGAUCUGCACAAGC	14	14	218	5	8	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12402282-12403351	Cluster_2661	Pocillopora_meandrina_HIv1___Sc0000006	12402282	12403351	1070	3740	671	0.07887700534759358	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	455	25	3550	9	15	42	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12403743-12404424	Cluster_2662	Pocillopora_meandrina_HIv1___Sc0000006	12403743	12404424	682	264	135	0.10984848484848485	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	31	4	245	3	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12407957-12408590	Cluster_2663	Pocillopora_meandrina_HIv1___Sc0000006	12407957	12408590	634	310	117	0.00967741935483871	-	UCUAUUCUCAAGCUUUUUGUAGCCCGCUGAU	51	4	303	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12418249-12419391	Cluster_2664	Pocillopora_meandrina_HIv1___Sc0000006	12418249	12419391	1143	6725	1328	0.009516728624535316	-	UCCGAUAAAGAAGGACUGUCGCCAGAAUU	501	53	6343	31	79	148	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12419449-12420504	Cluster_2665	Pocillopora_meandrina_HIv1___Sc0000006	12419449	12420504	1056	2013	734	0.017386984600099353	-	UGGGAACAUCUUUGAAGUCAUUUUUAUG	62	42	1859	11	39	30	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12421401-12424139	Cluster_2666	Pocillopora_meandrina_HIv1___Sc0000006	12421401	12424139	2739	42108	3185	0.046974446660967034	-	UGAUCAUGGAUUCUAAACUGGUAAUGGCC	13253	713	39626	528	141	432	668	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12425669-12428587	Cluster_2667	Pocillopora_meandrina_HIv1___Sc0000006	12425669	12428587	2919	14083	2612	0.0011361215650074559	-	UUCAUUCUGAGCACGGACCCUCUUGGACGUU	1264	261	13005	43	416	53	305	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12429120-12429549	Cluster_2668	Pocillopora_meandrina_HIv1___Sc0000006	12429120	12429549	430	236	111	0.0	-	UGAGAAGAUCUUUUAUUCGUCGCGGCCAUU	60	2	232	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12430411-12430838	Cluster_2669	Pocillopora_meandrina_HIv1___Sc0000006	12430411	12430838	428	258	82	0.0	-	UGGGUGUAGUGCUGAAUACUGCAGCAUU	80	0	253	0	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12430971-12431389	Cluster_2670	Pocillopora_meandrina_HIv1___Sc0000006	12430971	12431389	419	227	119	0.0	-	UAAGUUACACUGAUUUAACUCCUUUACA	14	4	221	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12431614-12432345	Cluster_2671	Pocillopora_meandrina_HIv1___Sc0000006	12431614	12432345	732	475	225	0.0	-	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	38	7	457	5	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12432474-12432909	Cluster_2672	Pocillopora_meandrina_HIv1___Sc0000006	12432474	12432909	436	396	158	0.010101010101010102	-	UGAAUCAUCACCGUCAUCUGCAGGUAGC	57	12	369	2	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12435659-12438419	Cluster_2673	Pocillopora_meandrina_HIv1___Sc0000006	12435659	12438419	2761	8062	2443	0.003349044902009427	-	UUAGAUUUGUGCUUUCUUCAAGAGAACUUGG	340	283	7430	122	50	98	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12438876-12439555	Cluster_2674	Pocillopora_meandrina_HIv1___Sc0000006	12438876	12439555	680	8223	545	0.0004864404718472577	-	UGAACAACAACUGCAGCGAAUAAACA	694	353	7426	173	162	34	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12440581-12441849	Cluster_2675	Pocillopora_meandrina_HIv1___Sc0000006	12440581	12441849	1269	7687	1234	0.027058670482633017	-	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1469	77	7338	14	67	90	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12441900-12443319	Cluster_2676	Pocillopora_meandrina_HIv1___Sc0000006	12441900	12443319	1420	2364	857	0.004230118443316413	-	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	134	23	2286	4	14	18	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12444136-12444951	Cluster_2677	Pocillopora_meandrina_HIv1___Sc0000006	12444136	12444951	816	28617	1236	0.00038438690288989064	-	UAUUUCAGGCUUCUCAAACAUCAUGUGA	4677	636	27411	110	199	119	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12446808-12450450	Cluster_2678	Pocillopora_meandrina_HIv1___Sc0000006	12446808	12450450	3643	147537	6301	0.0007794654900126748	-	UACGUUGGCUUUGUAGAUUACCCUGGUG	10685	948	137727	3748	526	3031	1557	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12450615-12452425	Cluster_2679	Pocillopora_meandrina_HIv1___Sc0000006	12450615	12452425	1811	24600	3391	0.00044715447154471545	-	UCCGAACUCUUGGCUUCUUGGCUUUGCG	1081	271	23585	119	123	146	356	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12452456-12453487	Cluster_2680	Pocillopora_meandrina_HIv1___Sc0000006	12452456	12453487	1032	1151	555	0.0	-	UGUUAUUGAUUCGUUGCCCGGACUCAUGGC	33	61	1016	9	26	15	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12453604-12457216	Cluster_2681	Pocillopora_meandrina_HIv1___Sc0000006	12453604	12457216	3613	87026	3533	0.00024130719555075494	-	UGUCCACCCCCCACCGGCUGUUUUUUGGUC	16328	1409	83249	325	1008	357	678	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12457222-12458419	Cluster_2682	Pocillopora_meandrina_HIv1___Sc0000006	12457222	12458419	1198	2795	726	0.001073345259391771	-	UGUAAAUUUAAAACUCUGAUAUCUUGUC	234	36	2675	8	18	29	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12458759-12460546	Cluster_2683	Pocillopora_meandrina_HIv1___Sc0000006	12458759	12460546	1788	48423	2202	0.001177126572083514	-	UAAGUUGAAGAUUGUAGCAGAAGCAAAAGC	11426	439	46876	243	149	271	445	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12461223-12461652	Cluster_2684	Pocillopora_meandrina_HIv1___Sc0000006	12461223	12461652	430	204	81	0.07352941176470588	-	UUGGCGUCUGUGUCGCAUCUGUGUUGCAU	16	22	180	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12650102-12650528	Cluster_2685	Pocillopora_meandrina_HIv1___Sc0000006	12650102	12650528	427	147	53	0.9727891156462585	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	37	1	143	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12692613-12693027	Cluster_2686	Pocillopora_meandrina_HIv1___Sc0000006	12692613	12693027	415	101	6	0.0	-	CGGCUGGGGGACGGUC	48	97	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12776187-12777280	Cluster_2687	Pocillopora_meandrina_HIv1___Sc0000006	12776187	12777280	1094	1241	468	0.9822723609991942	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	92	9	1197	5	4	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12777315-12777736	Cluster_2688	Pocillopora_meandrina_HIv1___Sc0000006	12777315	12777736	422	171	105	0.9415204678362573	+	UGGGAAUCCGAAUCGUGGUACAAAGUCA	18	3	163	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12777939-12778364	Cluster_2689	Pocillopora_meandrina_HIv1___Sc0000006	12777939	12778364	426	261	151	0.9578544061302682	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	31	6	232	4	1	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12779371-12780410	Cluster_2690	Pocillopora_meandrina_HIv1___Sc0000006	12779371	12780410	1040	866	384	0.9595842956120092	+	UAACAUCUCUCUUUCCGACUUUAACAGC	44	10	834	2	2	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12780550-12781540	Cluster_2691	Pocillopora_meandrina_HIv1___Sc0000006	12780550	12781540	991	1156	488	0.9204152249134948	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	101	15	1070	11	4	18	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12781662-12782146	Cluster_2692	Pocillopora_meandrina_HIv1___Sc0000006	12781662	12782146	485	492	279	0.774390243902439	.	UGAAUUUCGAUCUGCAGACUCUCGGUA	13	4	432	0	8	13	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12792988-12793789	Cluster_2693	Pocillopora_meandrina_HIv1___Sc0000006	12792988	12793789	802	2966	736	0.06372218476062036	-	UCCGAUACAAUAACGCUGUAGCUUUU	450	80	2745	13	16	63	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12795006-12795434	Cluster_2694	Pocillopora_meandrina_HIv1___Sc0000006	12795006	12795434	429	306	173	0.02287581699346405	-	UAGAAAGGAUCCUCUUCGUCUCUUCCAGG	23	4	290	2	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:12796401-12797081	Cluster_2695	Pocillopora_meandrina_HIv1___Sc0000006	12796401	12797081	681	2200	319	0.014090909090909091	-	UGUCAAAUUCAGGUUGUGUCAGGAGUCUGC	378	9	2126	3	5	39	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13037557-13038343	Cluster_2696	Pocillopora_meandrina_HIv1___Sc0000006	13037557	13038343	787	1792	483	0.9598214285714286	+	UGUAGAAUCAAUCUGUUACUAAGACACC	84	19	1683	17	8	28	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13078114-13078530	Cluster_2697	Pocillopora_meandrina_HIv1___Sc0000006	13078114	13078530	417	163	11	0.9877300613496932	+	CUUAACUGAGUGUCUAU	131	162	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13104657-13105328	Cluster_2698	Pocillopora_meandrina_HIv1___Sc0000006	13104657	13105328	672	884	340	0.7579185520361991	.	UGCGUGUAAAAGCUGGUCUCAAGAACC	179	12	772	13	5	30	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13229818-13230240	Cluster_2699	Pocillopora_meandrina_HIv1___Sc0000006	13229818	13230240	423	261	58	0.23754789272030652	.	UGUGUUUGUGUAGAGUUUUGUGU	73	97	2	27	11	121	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13238439-13238852	Cluster_2700	Pocillopora_meandrina_HIv1___Sc0000006	13238439	13238852	414	183	109	0.73224043715847	.	UCCGCCAUGACUGUUAUUGU	11	99	32	29	5	16	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13376534-13376951	Cluster_2701	Pocillopora_meandrina_HIv1___Sc0000006	13376534	13376951	418	388	38	0.9948453608247423	+	ACUGCUGCCGGUCGUUGU	79	387	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13443607-13444157	Cluster_2702	Pocillopora_meandrina_HIv1___Sc0000006	13443607	13444157	551	207	83	0.9178743961352657	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	31	1	186	1	3	11	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13445396-13446616	Cluster_2703	Pocillopora_meandrina_HIv1___Sc0000006	13445396	13446616	1221	1943	467	0.8003088008234689	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	448	13	1825	1	14	32	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13489777-13490194	Cluster_2704	Pocillopora_meandrina_HIv1___Sc0000006	13489777	13490194	418	145	19	0.0	-	GUAGUCGUGGCCGAGUGC	53	144	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13726353-13726769	Cluster_2705	Pocillopora_meandrina_HIv1___Sc0000006	13726353	13726769	417	117	11	0.008547008547008548	-	AACUUUUGACGGUGGAC	74	117	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13851754-13852280	Cluster_2706	Pocillopora_meandrina_HIv1___Sc0000006	13851754	13852280	527	7988	1269	0.0006259389083625439	-	UCGUGCAAUUUUUGGAACCCUUA	634	970	3018	753	1473	1215	559	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13862230-13862724	Cluster_2707	Pocillopora_meandrina_HIv1___Sc0000006	13862230	13862724	495	316	162	0.9778481012658228	+	UGUCCACCCCCCACU	17	41	269	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13863717-13864824	Cluster_2708	Pocillopora_meandrina_HIv1___Sc0000006	13863717	13864824	1108	35266	922	0.9980150853513299	+	UAAGAAAUCUUCCACUGAUCGUUGAGUU	7078	74	34189	71	77	194	661	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13865078-13865506	Cluster_2709	Pocillopora_meandrina_HIv1___Sc0000006	13865078	13865506	429	253	98	0.9841897233201581	+	UGAGGAUGAUGACAUAGCAUAUUGAAGUU	25	12	235	1	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13867251-13870516	Cluster_2710	Pocillopora_meandrina_HIv1___Sc0000006	13867251	13870516	3266	79641	4583	0.9997614294144975	+	UGCACCAGUUUGACCGUGAUUGCUCGUUGG	5762	3227	74004	397	1011	479	523	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13870573-13871700	Cluster_2711	Pocillopora_meandrina_HIv1___Sc0000006	13870573	13871700	1128	2934	677	0.9976141785957737	+	UUAUCAUAUGUCUCUGUAGUUUUUACAAC	336	53	2843	10	9	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13871763-13874376	Cluster_2712	Pocillopora_meandrina_HIv1___Sc0000006	13871763	13874376	2614	44443	4862	0.9887721350943905	+	UGCGCCAGUCUUGUUGUGAUUGUCUUUUGGA	3262	971	40913	277	506	862	914	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13874405-13875000	Cluster_2713	Pocillopora_meandrina_HIv1___Sc0000006	13874405	13875000	596	391	61	0.9948849104859335	+	UGAUUUUUGGAUGCAUAAGAAAUGUACA	199	7	379	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:13879584-13881610	Cluster_2714	Pocillopora_meandrina_HIv1___Sc0000006	13879584	13881610	2027	9483	2640	0.8184118949699463	+	UCGAUUUUCUUGCAUUUUCUGAACAGCA	154	178	8153	58	141	371	582	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000006:14024001-14024428	Cluster_2715	Pocillopora_meandrina_HIv1___Sc0000006	14024001	14024428	428	235	50	0.9914893617021276	+	UGGUUGGACAGUGUUCCAGAAGAGACUG	41	17	202	0	15	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:50715-51144	Cluster_2716	Pocillopora_meandrina_HIv1___Sc0000007	50715	51144	430	405	33	1.0	+	AACUACUGCUCGUACUCUAGAUAUGAC	99	5	399	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:288061-288475	Cluster_2717	Pocillopora_meandrina_HIv1___Sc0000007	288061	288475	415	131	11	0.022900763358778626	-	GUGGAAGGUAGGUCC	109	129	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:298237-298650	Cluster_2718	Pocillopora_meandrina_HIv1___Sc0000007	298237	298650	414	127	51	0.3937007874015748	.	UUUUCCGAGGUCGCG	65	95	22	2	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:611860-612428	Cluster_2719	Pocillopora_meandrina_HIv1___Sc0000007	611860	612428	569	363	122	0.6584022038567493	.	GCUUGAUGUACGCGAAAGAAAUUCGA	49	22	309	4	6	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:616359-617374	Cluster_2720	Pocillopora_meandrina_HIv1___Sc0000007	616359	617374	1016	2137	475	0.9518015910154423	+	UGAGAAUGUUUAGCCCGAGAUACGCUGA	239	69	1941	54	11	33	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:630887-631300	Cluster_2721	Pocillopora_meandrina_HIv1___Sc0000007	630887	631300	414	84	19	0.9880952380952381	+	CAAAAGGUGUUGGUU	19	84	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:872994-873470	Cluster_2722	Pocillopora_meandrina_HIv1___Sc0000007	872994	873470	477	49439	775	2.0226946337911367e-05	-	GGGGAUGUAGCUCAGUGGU	14194	32218	12160	1227	610	732	2492	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:893771-894189	Cluster_2723	Pocillopora_meandrina_HIv1___Sc0000007	893771	894189	419	639	46	1.0	+	AUCGGCCGUGGAUUGGCU	274	634	2	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:896500-896915	Cluster_2724	Pocillopora_meandrina_HIv1___Sc0000007	896500	896915	416	152	28	0.9868421052631579	+	AAGUGUGCUCUUAACC	86	137	11	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:969533-970234	Cluster_2725	Pocillopora_meandrina_HIv1___Sc0000007	969533	970234	702	249	135	0.9116465863453815	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	22	5	234	2	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:971464-971893	Cluster_2726	Pocillopora_meandrina_HIv1___Sc0000007	971464	971893	430	297	159	0.835016835016835	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	31	4	270	2	3	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1122671-1123098	Cluster_2727	Pocillopora_meandrina_HIv1___Sc0000007	1122671	1123098	428	235	55	0.9617021276595744	+	UAUUAUUCAUCUGCUGUCUUUUUGCCUC	75	9	215	6	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1138171-1138586	Cluster_2728	Pocillopora_meandrina_HIv1___Sc0000007	1138171	1138586	416	87	15	0.896551724137931	+	CGGCCUGAAAAAAAAAA	59	82	3	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1154912-1155450	Cluster_2729	Pocillopora_meandrina_HIv1___Sc0000007	1154912	1155450	539	2474	598	0.0008084074373484236	-	CCAAUUACUGAUAACUCAGACACUC	182	417	1396	175	126	124	236	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1291292-1291706	Cluster_2730	Pocillopora_meandrina_HIv1___Sc0000007	1291292	1291706	415	92	18	0.06521739130434782	-	UCGGGCUGAGACUGG	36	91	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1441905-1442319	Cluster_2731	Pocillopora_meandrina_HIv1___Sc0000007	1441905	1442319	415	109	16	0.9908256880733946	+	UUAAAGGCGUAGAAGC	38	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1526279-1526967	Cluster_2732	Pocillopora_meandrina_HIv1___Sc0000007	1526279	1526967	689	237	85	0.9873417721518988	+	UCCGUGUGUUUGUUUGGAUCAUAUCUACGC	28	5	217	3	2	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1823708-1824268	Cluster_2733	Pocillopora_meandrina_HIv1___Sc0000007	1823708	1824268	561	4155	469	0.9566787003610109	+	UAGAGCUCUUGUUUUUUCCACAUCAAUA	1157	150	3725	13	130	60	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1836763-1837179	Cluster_2734	Pocillopora_meandrina_HIv1___Sc0000007	1836763	1837179	417	111	76	0.22522522522522523	.	UAUUGCUGAACAGACGCACG	12	58	14	13	12	12	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1864647-1865061	Cluster_2735	Pocillopora_meandrina_HIv1___Sc0000007	1864647	1865061	415	79	9	0.9240506329113924	+	CUUUCCGAGGUCGAG	69	75	2	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1884502-1885055	Cluster_2736	Pocillopora_meandrina_HIv1___Sc0000007	1884502	1885055	554	419	217	0.9570405727923628	+	UAGGUAAUGGCACAAACUGAGAGGCGU	33	5	391	2	3	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1885527-1886117	Cluster_2737	Pocillopora_meandrina_HIv1___Sc0000007	1885527	1886117	591	522	298	0.9099616858237548	+	UCCGUUUCGCUUGACUACUGGGACAAUUG	20	7	491	0	3	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1886403-1887596	Cluster_2738	Pocillopora_meandrina_HIv1___Sc0000007	1886403	1887596	1194	1233	540	0.9180859691808597	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	91	16	1146	1	6	16	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1925271-1925700	Cluster_2739	Pocillopora_meandrina_HIv1___Sc0000007	1925271	1925700	430	130	38	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	36	4	122	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:1953727-1954156	Cluster_2740	Pocillopora_meandrina_HIv1___Sc0000007	1953727	1954156	430	209	53	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	55	3	199	0	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2004533-2004961	Cluster_2741	Pocillopora_meandrina_HIv1___Sc0000007	2004533	2004961	429	122	35	0.0	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	32	2	118	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2025511-2025939	Cluster_2742	Pocillopora_meandrina_HIv1___Sc0000007	2025511	2025939	429	112	39	0.008928571428571428	-	UCCCGAUCGAGGAGAAAUAGCACUUUCCCC	29	3	104	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2186450-2186864	Cluster_2743	Pocillopora_meandrina_HIv1___Sc0000007	2186450	2186864	415	84	31	0.023809523809523808	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	30	3	79	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2187088-2187504	Cluster_2744	Pocillopora_meandrina_HIv1___Sc0000007	2187088	2187504	417	258	9	0.007751937984496124	-	CCGGCUGUCGCACCG	99	258	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2304432-2304859	Cluster_2745	Pocillopora_meandrina_HIv1___Sc0000007	2304432	2304859	428	181	37	0.2541436464088398	.	UUGUUGUGUUUUUCGAUGGUGGGCAUCC	57	6	157	7	6	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2321106-2321518	Cluster_2746	Pocillopora_meandrina_HIv1___Sc0000007	2321106	2321518	413	148	75	0.11486486486486487	-	UGUGACCGAGGUCUUGAAAAA	20	62	1	49	24	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2364815-2365242	Cluster_2747	Pocillopora_meandrina_HIv1___Sc0000007	2364815	2365242	428	190	79	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	16	1	183	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2399478-2400302	Cluster_2748	Pocillopora_meandrina_HIv1___Sc0000007	2399478	2400302	825	812	174	0.9938423645320197	+	AGCUGAGUGAUACUGACAUUUC	198	149	33	157	359	94	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2483714-2484130	Cluster_2749	Pocillopora_meandrina_HIv1___Sc0000007	2483714	2484130	417	603	29	0.003316749585406302	-	GAGUUCUACAGUCCGA	363	603	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2625697-2626144	Cluster_2750	Pocillopora_meandrina_HIv1___Sc0000007	2625697	2626144	448	417	188	0.19904076738609114	-	UAUGACGUUCCAGAAUCUUUGACAAAA	32	2	394	5	4	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2626667-2627096	Cluster_2751	Pocillopora_meandrina_HIv1___Sc0000007	2626667	2627096	430	163	48	0.006134969325153374	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	21	1	159	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2716658-2718359	Cluster_2752	Pocillopora_meandrina_HIv1___Sc0000007	2716658	2718359	1702	3444	1135	0.09146341463414634	-	UGUUUCGUCUAUGUGCAAUGUUACUU	141	29	3236	15	22	46	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2718799-2719226	Cluster_2753	Pocillopora_meandrina_HIv1___Sc0000007	2718799	2719226	428	148	41	0.02702702702702703	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	73	0	145	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2719310-2719736	Cluster_2754	Pocillopora_meandrina_HIv1___Sc0000007	2719310	2719736	427	339	131	0.07669616519174041	-	UCCAAUCACACACAGUUCUCCUGCGGC	80	1	315	1	3	5	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2720111-2720519	Cluster_2755	Pocillopora_meandrina_HIv1___Sc0000007	2720111	2720519	409	221	120	0.03619909502262444	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	24	0	214	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2720765-2721180	Cluster_2756	Pocillopora_meandrina_HIv1___Sc0000007	2720765	2721180	416	197	103	0.050761421319796954	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	23	6	178	2	0	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:2950257-2950671	Cluster_2757	Pocillopora_meandrina_HIv1___Sc0000007	2950257	2950671	415	203	22	0.9950738916256158	+	AGCUGACUUUGGUGG	98	203	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3019487-3019911	Cluster_2758	Pocillopora_meandrina_HIv1___Sc0000007	3019487	3019911	425	291	183	0.1958762886597938	-	UGAGAAAUGAUCGUUUGAUGGUGUCUGUG	8	4	267	2	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3066364-3066790	Cluster_2759	Pocillopora_meandrina_HIv1___Sc0000007	3066364	3066790	427	208	87	0.0	-	CCUCAUGGACGCCAAACUGAUGCUCAC	24	2	198	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3070005-3070433	Cluster_2760	Pocillopora_meandrina_HIv1___Sc0000007	3070005	3070433	429	88	24	0.011363636363636364	-	UGAGUUCUACUGUAACGACUGAAUAGACU	34	1	84	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3107655-3108083	Cluster_2761	Pocillopora_meandrina_HIv1___Sc0000007	3107655	3108083	429	300	52	0.03	-	AAGAUGUCGAGCGUUUUCGGAACGAGUCG	120	11	270	0	2	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3209174-3209695	Cluster_2762	Pocillopora_meandrina_HIv1___Sc0000007	3209174	3209695	522	415	230	0.004819277108433735	-	GUGUCAGCUGCCUGCACUGGGCCAGG	38	65	253	15	21	29	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3243243-3243668	Cluster_2763	Pocillopora_meandrina_HIv1___Sc0000007	3243243	3243668	426	123	54	0.926829268292683	+	UGUAUUUGCUGAUCUAUUUGACAUCCUU	16	8	113	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3244846-3247533	Cluster_2764	Pocillopora_meandrina_HIv1___Sc0000007	3244846	3247533	2688	4687	3112	0.002773629187113292	-	GGGAAACAGUGUAUACUUUGUAAGU	18	1433	1963	285	335	343	328	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3247717-3248682	Cluster_2765	Pocillopora_meandrina_HIv1___Sc0000007	3247717	3248682	966	1376	949	0.0014534883720930232	-	UUUGGUCUGUGAGCAAAAGCA	12	399	565	106	118	109	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3248740-3249651	Cluster_2766	Pocillopora_meandrina_HIv1___Sc0000007	3248740	3249651	912	1011	701	0.002967359050445104	-	GCUGUGUCUUAGAGAACC	17	334	369	79	84	71	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3249791-3251091	Cluster_2767	Pocillopora_meandrina_HIv1___Sc0000007	3249791	3251091	1301	1576	1138	0.0025380710659898475	-	CAAAAGACUGUAUUGUACUCAAUU	6	546	564	122	108	125	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3251174-3254056	Cluster_2768	Pocillopora_meandrina_HIv1___Sc0000007	3251174	3254056	2883	3857	2682	0.005703914959813326	-	GAUGGACCGAGCAGCA	10	1319	1410	266	300	292	270	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3254203-3255318	Cluster_2769	Pocillopora_meandrina_HIv1___Sc0000007	3254203	3255318	1116	1402	959	0.0021398002853067048	-	UUUGAACUAGUGGAGUGGAAAGCU	18	478	514	127	92	95	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3256040-3256965	Cluster_2770	Pocillopora_meandrina_HIv1___Sc0000007	3256040	3256965	926	1095	771	0.0	-	AACACUCCGUGUACUCAGACA	10	371	395	84	78	87	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3284710-3285240	Cluster_2771	Pocillopora_meandrina_HIv1___Sc0000007	3284710	3285240	531	983	302	1.0	+	UACCCUCUUCAUUAAAUAGCUUGC	60	101	494	64	52	160	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3285428-3285960	Cluster_2772	Pocillopora_meandrina_HIv1___Sc0000007	3285428	3285960	533	411	127	0.9902676399026764	+	UACCCUCUUCAUUUAAUAGCUUGCUU	77	145	178	36	21	14	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3286476-3286958	Cluster_2773	Pocillopora_meandrina_HIv1___Sc0000007	3286476	3286958	483	6037	568	0.9996687096239855	+	CCAUUGAGUGCUGUCUGAGCUGA	670	876	1077	403	1396	1697	588	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3412445-3412875	Cluster_2774	Pocillopora_meandrina_HIv1___Sc0000007	3412445	3412875	431	1464	112	0.9986338797814208	+	CGAUCCAACAAGAACAAUAUGUGCUGACU	508	0	1457	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3596624-3597052	Cluster_2775	Pocillopora_meandrina_HIv1___Sc0000007	3596624	3597052	429	162	39	0.8580246913580247	+	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	62	4	155	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3621414-3621871	Cluster_2776	Pocillopora_meandrina_HIv1___Sc0000007	3621414	3621871	458	582	165	0.8831615120274914	+	UUGGACGAAAUUUCGAGGUUCACACUCGUU	73	9	558	4	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3625165-3625966	Cluster_2777	Pocillopora_meandrina_HIv1___Sc0000007	3625165	3625966	802	512	169	0.90625	+	UGAGACUUUGAUUUUAACUGCU	55	34	332	11	113	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3629143-3629888	Cluster_2778	Pocillopora_meandrina_HIv1___Sc0000007	3629143	3629888	746	1355	450	0.6280442804428045	.	CAAGACUGAAUUCCUUAUCAUUGGCACAUC	169	24	1267	6	2	16	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3631088-3631919	Cluster_2779	Pocillopora_meandrina_HIv1___Sc0000007	3631088	3631919	832	596	249	0.04865771812080537	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	49	6	571	0	2	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3633717-3634331	Cluster_2780	Pocillopora_meandrina_HIv1___Sc0000007	3633717	3634331	615	1431	161	0.24178895877009085	.	UGCUGUAUGUAAUCUGAUGCAAGAACGC	171	11	1245	108	9	46	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3634376-3635130	Cluster_2781	Pocillopora_meandrina_HIv1___Sc0000007	3634376	3635130	755	900	148	0.5422222222222223	.	UAAAGAGGACUGAUAAUCUCAGGUUAUC	293	2	711	5	29	25	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3635508-3635937	Cluster_2782	Pocillopora_meandrina_HIv1___Sc0000007	3635508	3635937	430	382	51	0.02356020942408377	-	AAGGAGUUGAAAAGAACAAUGAUGUAGC	98	1	379	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3656762-3657191	Cluster_2783	Pocillopora_meandrina_HIv1___Sc0000007	3656762	3657191	430	241	50	0.04979253112033195	-	AACUGAAGAAUUAAUCUCUAAAAUUGGUAG	95	6	232	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3662339-3662764	Cluster_2784	Pocillopora_meandrina_HIv1___Sc0000007	3662339	3662764	426	161	56	0.9937888198757764	+	UACGGUAUUUGAGACGCAAUAUGACUCGC	21	3	153	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3690491-3691008	Cluster_2785	Pocillopora_meandrina_HIv1___Sc0000007	3690491	3691008	518	496	226	0.0020161290322580645	-	UGGGUAUUUCCUCGUCCGCAGAACUGGUU	53	7	478	4	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3871980-3872681	Cluster_2786	Pocillopora_meandrina_HIv1___Sc0000007	3871980	3872681	702	277	129	0.9458483754512635	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	29	6	262	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:3873911-3874340	Cluster_2787	Pocillopora_meandrina_HIv1___Sc0000007	3873911	3874340	430	282	141	0.8333333333333334	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	37	3	255	0	0	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4514094-4514523	Cluster_2788	Pocillopora_meandrina_HIv1___Sc0000007	4514094	4514523	430	181	30	0.988950276243094	+	UCAACAGCCUGAACUUGUCUUCACAAGACU	56	2	177	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4561649-4562122	Cluster_2789	Pocillopora_meandrina_HIv1___Sc0000007	4561649	4562122	474	1582	500	0.9911504424778761	+	CAGAGGAAGCGUGCU	126	1145	218	80	78	39	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4596422-4596884	Cluster_2790	Pocillopora_meandrina_HIv1___Sc0000007	4596422	4596884	463	1571	389	0.9993634627625716	+	AAUAAUGAUGAAUUGCACUGGGUUAUGAUA	118	360	767	64	75	160	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4624808-4625429	Cluster_2791	Pocillopora_meandrina_HIv1___Sc0000007	4624808	4625429	622	857	208	0.9521586931155193	+	UAAGCAAUCAACUCCAACAAACUCGUCAGA	257	10	820	8	1	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4800325-4800781	Cluster_2792	Pocillopora_meandrina_HIv1___Sc0000007	4800325	4800781	457	643	197	0.0015552099533437014	-	AAUAAUGAUGAUUUGCACUGGGU	28	135	189	70	63	106	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4801557-4801981	Cluster_2793	Pocillopora_meandrina_HIv1___Sc0000007	4801557	4801981	425	206	98	0.0	-	AAUGAUGAUGAUUUGCACUGGGU	12	48	85	9	11	29	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4846330-4846744	Cluster_2794	Pocillopora_meandrina_HIv1___Sc0000007	4846330	4846744	415	162	77	0.2777777777777778	.	GAUGAAAGGAAAUGCAAACUUGCUAAAACA	21	3	151	1	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4889037-4889456	Cluster_2795	Pocillopora_meandrina_HIv1___Sc0000007	4889037	4889456	420	118	40	1.0	+	GAUUAUUUGUAGAACUUGCAGUGU	21	55	29	5	2	1	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4940258-4940673	Cluster_2796	Pocillopora_meandrina_HIv1___Sc0000007	4940258	4940673	416	241	64	0.05394190871369295	-	UGUAUCCCAACCAAGU	156	159	76	0	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4960512-4960935	Cluster_2797	Pocillopora_meandrina_HIv1___Sc0000007	4960512	4960935	424	146	53	0.9178082191780822	+	UUGGGGAUCAAAGACGAAACGAGU	43	5	39	9	0	15	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:4962468-4962870	Cluster_2798	Pocillopora_meandrina_HIv1___Sc0000007	4962468	4962870	403	124	64	0.016129032258064516	-	UGUAAGUGUAGCCCUGAGUAUCGAUCAGC	16	4	114	5	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5045346-5045792	Cluster_2799	Pocillopora_meandrina_HIv1___Sc0000007	5045346	5045792	447	588	430	0.0	-	AAUUGAUUUUCGUGAAGCUGUCGUU	7	184	238	44	38	36	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5047265-5047679	Cluster_2800	Pocillopora_meandrina_HIv1___Sc0000007	5047265	5047679	415	260	107	0.011538461538461539	-	AGACUUGAAGCGGUA	85	166	49	11	14	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5048040-5048457	Cluster_2801	Pocillopora_meandrina_HIv1___Sc0000007	5048040	5048457	418	306	229	0.00980392156862745	-	GGAUGAAUCUGACAGCGACU	7	100	122	27	23	19	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5147626-5148534	Cluster_2802	Pocillopora_meandrina_HIv1___Sc0000007	5147626	5148534	909	4374	406	0.958161865569273	+	UAAGAUCUCUUCGGUCAGAUCGUCACGG	1601	27	4298	10	6	7	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5192655-5193083	Cluster_2803	Pocillopora_meandrina_HIv1___Sc0000007	5192655	5193083	429	111	43	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	28	1	102	2	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5193672-5194081	Cluster_2804	Pocillopora_meandrina_HIv1___Sc0000007	5193672	5194081	410	83	43	0.26506024096385544	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	10	1	78	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5194635-5195063	Cluster_2805	Pocillopora_meandrina_HIv1___Sc0000007	5194635	5195063	429	112	42	0.0	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	31	0	103	1	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5223879-5224288	Cluster_2806	Pocillopora_meandrina_HIv1___Sc0000007	5223879	5224288	410	96	26	0.3229166666666667	.	AGUGUCAGAAUGCAAUGCCUACUUAUCCCC	22	2	84	5	4	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5228968-5229397	Cluster_2807	Pocillopora_meandrina_HIv1___Sc0000007	5228968	5229397	430	399	97	0.022556390977443608	-	UGUUCAUGCUGUGCUUGACGAGCUUGUC	109	7	381	1	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5229790-5230361	Cluster_2808	Pocillopora_meandrina_HIv1___Sc0000007	5229790	5230361	572	412	170	0.06067961165048544	-	UCAAAUACAACACCAAAAGAC	33	21	336	40	3	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5262939-5263347	Cluster_2809	Pocillopora_meandrina_HIv1___Sc0000007	5262939	5263347	409	128	83	0.2109375	.	UAUACGAACAGAUCAGUUCCUCCGAAGC	9	10	98	8	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5268009-5268424	Cluster_2810	Pocillopora_meandrina_HIv1___Sc0000007	5268009	5268424	416	141	13	0.02127659574468085	-	AGGGUUAAGUUGCGGG	66	139	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5303056-5304111	Cluster_2811	Pocillopora_meandrina_HIv1___Sc0000007	5303056	5304111	1056	507	191	0.9644970414201184	+	UAUAUCUUCUUCGGACGCCCACGGCGCGCGA	36	5	486	1	3	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5306438-5306993	Cluster_2812	Pocillopora_meandrina_HIv1___Sc0000007	5306438	5306993	556	960	270	0.9697916666666667	+	UGGACGUACGCAUUCACGAUCUCGCUCGUU	87	3	928	6	1	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5310720-5311147	Cluster_2813	Pocillopora_meandrina_HIv1___Sc0000007	5310720	5311147	428	252	111	0.3134920634920635	.	UGGACCGUACGAAUCUCACUGAUCGACA	35	58	151	30	4	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5326494-5327037	Cluster_2814	Pocillopora_meandrina_HIv1___Sc0000007	5326494	5327037	544	1179	335	0.998303647158609	+	UGUAGAUUACAUUGUCGGCACAUU	193	112	423	83	81	151	329	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5327132-5327635	Cluster_2815	Pocillopora_meandrina_HIv1___Sc0000007	5327132	5327635	504	484	255	0.9958677685950413	+	UGCAGGACAAGAGAAAAGAAUU	26	92	213	41	53	32	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5333248-5333666	Cluster_2816	Pocillopora_meandrina_HIv1___Sc0000007	5333248	5333666	419	288	199	0.034722222222222224	-	GUAAGCUUUGUCAGCACUCUACAGAUUUGU	11	88	108	22	16	33	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5337433-5337848	Cluster_2817	Pocillopora_meandrina_HIv1___Sc0000007	5337433	5337848	416	387	39	0.937984496124031	+	GCUUGGGACGCUGGCA	194	367	14	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5341789-5342203	Cluster_2818	Pocillopora_meandrina_HIv1___Sc0000007	5341789	5342203	415	159	83	0.0	-	GCAGAUGAUAAAUGCUCCUUGACUGUGGCA	33	44	96	6	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5497876-5498312	Cluster_2819	Pocillopora_meandrina_HIv1___Sc0000007	5497876	5498312	437	347	245	0.0	-	CUCUUCUACGCUGGACAACCUCUAGA	10	145	112	38	20	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5579669-5580098	Cluster_2820	Pocillopora_meandrina_HIv1___Sc0000007	5579669	5580098	430	372	41	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACC	209	0	356	0	3	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5636610-5637039	Cluster_2821	Pocillopora_meandrina_HIv1___Sc0000007	5636610	5637039	430	368	41	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACC	188	3	343	0	4	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5688875-5689904	Cluster_2822	Pocillopora_meandrina_HIv1___Sc0000007	5688875	5689904	1030	18289	1762	0.0	-	GUGGCAACUUUGCUAGUGAACU	1466	1268	7840	508	4567	1738	2368	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5886330-5886758	Cluster_2823	Pocillopora_meandrina_HIv1___Sc0000007	5886330	5886758	429	114	26	0.06140350877192982	-	AUCUAAACGAACUUGUUUUUCUUAUGAGCA	48	2	108	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5914402-5914825	Cluster_2824	Pocillopora_meandrina_HIv1___Sc0000007	5914402	5914825	424	109	39	0.7614678899082569	.	UGUGUAUGCGUCUAUAAGUAUUUUGAGC	25	2	107	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:5999694-6000109	Cluster_2825	Pocillopora_meandrina_HIv1___Sc0000007	5999694	6000109	416	143	28	0.9300699300699301	+	AACUUUUGACCUCAUU	54	140	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6293412-6293826	Cluster_2826	Pocillopora_meandrina_HIv1___Sc0000007	6293412	6293826	415	288	6	0.9965277777777778	+	CUUCCCGAGGUCGCG	259	287	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6376617-6377151	Cluster_2827	Pocillopora_meandrina_HIv1___Sc0000007	6376617	6377151	535	710	171	0.9985915492957746	+	UGGCAUUUGUAAAGCCCACGCGACGU	100	44	594	22	13	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6394918-6395341	Cluster_2828	Pocillopora_meandrina_HIv1___Sc0000007	6394918	6395341	424	118	37	0.025423728813559324	-	GGGGGCAUAGCUCAGUGGUAGAGCAUU	16	8	64	5	17	1	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6616417-6616844	Cluster_2829	Pocillopora_meandrina_HIv1___Sc0000007	6616417	6616844	428	284	78	0.03873239436619718	-	UGAUAAACCUGUAGCUGAAGCUUCUGCA	81	8	247	6	12	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6749085-6749513	Cluster_2830	Pocillopora_meandrina_HIv1___Sc0000007	6749085	6749513	429	231	46	0.017316017316017316	-	AACUGAAGAAUCGAUCUCUGAAACCGAUA	56	4	213	1	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6929571-6929998	Cluster_2831	Pocillopora_meandrina_HIv1___Sc0000007	6929571	6929998	428	275	63	0.13454545454545455	-	UGAAACUCUGAUCUGAAAACAUUUGUC	77	10	252	5	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:6986003-6986421	Cluster_2832	Pocillopora_meandrina_HIv1___Sc0000007	6986003	6986421	419	94	32	0.02127659574468085	-	AACUGAAGAAUCAACCUCUGAAACCGAUA	48	2	85	4	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7044681-7045103	Cluster_2833	Pocillopora_meandrina_HIv1___Sc0000007	7044681	7045103	423	201	72	0.014925373134328358	-	UGCAGAGACUCUUGGGAACCAAAGCUCAUU	43	4	191	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7045916-7046838	Cluster_2834	Pocillopora_meandrina_HIv1___Sc0000007	7045916	7046838	923	1903	498	0.0015764582238570678	-	UCGGCCACGAUCUUUCUUGUAAACUAGAAA	213	23	1840	7	3	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7046891-7047410	Cluster_2835	Pocillopora_meandrina_HIv1___Sc0000007	7046891	7047410	520	567	167	0.001763668430335097	-	UGAUAUCAAUAUGACGUCAUAACCGUGGGA	121	5	538	3	3	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7082683-7083500	Cluster_2836	Pocillopora_meandrina_HIv1___Sc0000007	7082683	7083500	818	691	208	0.38060781476121563	.	UGGACCACAAACUCUGACCCUAAGCUUAUU	98	11	596	6	16	13	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7083968-7084500	Cluster_2837	Pocillopora_meandrina_HIv1___Sc0000007	7083968	7084500	533	2091	266	0.9564801530368244	+	UUUGAUUCCGAAAAAAUGUAAUCUUCUGC	1133	28	2001	1	17	28	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7153266-7154927	Cluster_2838	Pocillopora_meandrina_HIv1___Sc0000007	7153266	7154927	1662	9126	2319	0.930856892395354	+	UGAUAGACUGCACGACGAUUUACGUCA	522	132	8254	67	75	245	353	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7154981-7155657	Cluster_2839	Pocillopora_meandrina_HIv1___Sc0000007	7154981	7155657	677	7952	555	0.9963531187122736	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2121	14	7834	5	38	26	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7248731-7249149	Cluster_2840	Pocillopora_meandrina_HIv1___Sc0000007	7248731	7249149	419	137	42	0.072992700729927	-	UCUUGCCAUAUGAGAUGACUACUGA	28	45	57	1	14	13	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7334354-7334768	Cluster_2841	Pocillopora_meandrina_HIv1___Sc0000007	7334354	7334768	415	166	17	0.9397590361445783	+	GAGACUUGAAGCGGA	97	163	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7355065-7355542	Cluster_2842	Pocillopora_meandrina_HIv1___Sc0000007	7355065	7355542	478	2433	434	0.9991779695848746	+	GCCCCAAUGAUUAUUUGUAUUGUAGAGU	245	429	1225	138	258	173	210	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7479295-7479710	Cluster_2843	Pocillopora_meandrina_HIv1___Sc0000007	7479295	7479710	416	641	10	1.0	+	CCGUGUUGUAGGCGG	341	641	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7480715-7481624	Cluster_2844	Pocillopora_meandrina_HIv1___Sc0000007	7480715	7481624	910	843	299	0.8991696322657177	+	UGGGUCGUAUUCCUAAAUCUUGAGCAA	63	28	749	14	10	16	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7538983-7539398	Cluster_2845	Pocillopora_meandrina_HIv1___Sc0000007	7538983	7539398	416	85	22	0.0	-	CCGGGUCUCGGCACCA	37	72	4	1	8	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7611857-7612284	Cluster_2846	Pocillopora_meandrina_HIv1___Sc0000007	7611857	7612284	428	86	23	0.9883720930232558	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	27	1	84	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7614948-7615363	Cluster_2847	Pocillopora_meandrina_HIv1___Sc0000007	7614948	7615363	416	211	119	0.8436018957345972	+	UAAUCUUGAUGGCUCGAGACGUGGUAUCU	10	8	195	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7615385-7615815	Cluster_2848	Pocillopora_meandrina_HIv1___Sc0000007	7615385	7615815	431	333	150	0.9519519519519519	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUG	21	5	320	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7637557-7638159	Cluster_2849	Pocillopora_meandrina_HIv1___Sc0000007	7637557	7638159	603	773	449	0.00517464424320828	-	AUUGCUAAUGGAUUUGCUGAGAAGU	21	283	310	51	50	36	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7639145-7639561	Cluster_2850	Pocillopora_meandrina_HIv1___Sc0000007	7639145	7639561	417	246	177	0.0	-	GCAGAAGGAACCAUUGGCU	7	140	58	13	10	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7640264-7640677	Cluster_2851	Pocillopora_meandrina_HIv1___Sc0000007	7640264	7640677	414	93	60	0.0	-	CGUGUGGAACGGACGU	5	54	15	7	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7641666-7642131	Cluster_2852	Pocillopora_meandrina_HIv1___Sc0000007	7641666	7642131	466	387	263	0.007751937984496124	-	GGCAACGCCAGGUCUGUGUAUUUCGUGC	8	160	131	11	39	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7650244-7650717	Cluster_2853	Pocillopora_meandrina_HIv1___Sc0000007	7650244	7650717	474	62730	2232	0.9987246931292842	+	CACCCCUCUCCGCUCAUCGACCUCAUC	4553	8974	47237	1613	1560	1539	1807	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7651332-7651803	Cluster_2854	Pocillopora_meandrina_HIv1___Sc0000007	7651332	7651803	472	45190	1405	0.9931400752378845	+	CACCCCUCUCCGCCUAUCGACCUCAU	3912	11363	28247	1684	1025	1339	1532	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7651965-7652545	Cluster_2855	Pocillopora_meandrina_HIv1___Sc0000007	7651965	7652545	581	975	247	0.638974358974359	.	UUUUGACUACCAAUGGAACCAGAAAGU	136	137	676	50	39	5	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7670315-7670765	Cluster_2856	Pocillopora_meandrina_HIv1___Sc0000007	7670315	7670765	451	3049	131	1.0	+	UCAUGUAGAUGCGCAUGUCCGG	790	1158	96	74	1610	102	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7794360-7794782	Cluster_2857	Pocillopora_meandrina_HIv1___Sc0000007	7794360	7794782	423	327	240	0.9877675840978594	+	AUCUUCGAUCACAGGGACUGU	7	130	101	42	14	15	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:7796875-7797277	Cluster_2858	Pocillopora_meandrina_HIv1___Sc0000007	7796875	7797277	403	213	154	0.9906103286384976	+	AAUGGAAGCUGUGGU	6	98	53	17	16	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8002703-8003120	Cluster_2859	Pocillopora_meandrina_HIv1___Sc0000007	8002703	8003120	418	883	64	1.0	+	ACCUCGCUCUGCUACCA	231	883	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8052923-8053350	Cluster_2860	Pocillopora_meandrina_HIv1___Sc0000007	8052923	8053350	428	140	40	0.9928571428571429	+	UGGAAUUCGAAGCAAGUAACAAUGGACA	33	2	129	3	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8178845-8179260	Cluster_2861	Pocillopora_meandrina_HIv1___Sc0000007	8178845	8179260	416	147	6	0.0	-	GGGCGGGUGGCGAAAU	81	147	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8205880-8206297	Cluster_2862	Pocillopora_meandrina_HIv1___Sc0000007	8205880	8206297	418	113	61	0.8053097345132744	+	UCUCGGCAUCUAAUCUCCAUU	25	45	0	60	4	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8242890-8243324	Cluster_2863	Pocillopora_meandrina_HIv1___Sc0000007	8242890	8243324	435	433	88	0.06928406466512702	-	UGUGUUGUUUCUCACCUUUGCCGUCAA	102	46	366	2	3	12	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8285014-8285444	Cluster_2864	Pocillopora_meandrina_HIv1___Sc0000007	8285014	8285444	431	28393	252	0.0016201176346282535	-	UAACUUCAACUAGAUCGAAAUGCUCGUGA	20582	40	28232	4	6	4	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8508719-8509201	Cluster_2865	Pocillopora_meandrina_HIv1___Sc0000007	8508719	8509201	483	2345	315	0.00042643923240938164	-	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	725	120	2034	87	73	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8601575-8601990	Cluster_2866	Pocillopora_meandrina_HIv1___Sc0000007	8601575	8601990	416	254	13	0.984251968503937	+	UACCUGGUUGAUCCG	92	254	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8700410-8700826	Cluster_2867	Pocillopora_meandrina_HIv1___Sc0000007	8700410	8700826	417	588	15	0.0	-	UUAGGGUGCUGUCGGCC	419	585	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8848491-8848918	Cluster_2868	Pocillopora_meandrina_HIv1___Sc0000007	8848491	8848918	428	196	87	0.9693877551020408	+	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	27	4	187	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8849560-8849989	Cluster_2869	Pocillopora_meandrina_HIv1___Sc0000007	8849560	8849989	430	412	120	0.970873786407767	+	UAUCGUCUUGUUUCUGUUCUGACCCGAAC	79	2	394	0	4	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8873693-8874108	Cluster_2870	Pocillopora_meandrina_HIv1___Sc0000007	8873693	8874108	416	137	23	0.014598540145985401	-	CCCUUUGCCUCUCCGGC	35	136	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8903235-8903974	Cluster_2871	Pocillopora_meandrina_HIv1___Sc0000007	8903235	8903974	740	524	395	0.9942748091603053	+	UUUGGACUUGAGCGAAAGCGUCG	7	139	204	43	40	57	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8910865-8911278	Cluster_2872	Pocillopora_meandrina_HIv1___Sc0000007	8910865	8911278	414	132	73	1.0	+	GCAUGGACUCAGAACGCGAGAUAGC	12	56	46	4	9	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8911376-8911779	Cluster_2873	Pocillopora_meandrina_HIv1___Sc0000007	8911376	8911779	404	122	95	0.9918032786885246	+	ACUUGGACUGAAUGGCGUCA	4	60	23	8	9	19	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8912021-8912424	Cluster_2874	Pocillopora_meandrina_HIv1___Sc0000007	8912021	8912424	404	111	86	0.990990990990991	+	CUGGAUUUUUACUUUCGAGAAUAGCGAA	5	45	38	8	11	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8912965-8913668	Cluster_2875	Pocillopora_meandrina_HIv1___Sc0000007	8912965	8913668	704	387	292	0.9844961240310077	+	GUCAAAGGAUAACAGAGAACGGACA	12	115	170	20	29	33	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8992161-8992652	Cluster_2876	Pocillopora_meandrina_HIv1___Sc0000007	8992161	8992652	492	385	181	0.9922077922077922	+	CCUUCGAUAGCUCAGUUGGUAGAGCGGA	43	177	126	28	12	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8995452-8995931	Cluster_2877	Pocillopora_meandrina_HIv1___Sc0000007	8995452	8995931	480	70709	2595	0.9984726131044138	+	CCCCCCUCCCCGCCUUAUGACCUCAUC	2926	27466	33914	3878	2668	1369	1414	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:8997769-8998243	Cluster_2878	Pocillopora_meandrina_HIv1___Sc0000007	8997769	8998243	475	246990	4229	0.9999311713024819	+	CGCCCCUCCCCGCCCUUUGACCUCAUU	19419	75434	135520	9205	15267	8109	3455	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9006638-9007111	Cluster_2879	Pocillopora_meandrina_HIv1___Sc0000007	9006638	9007111	474	5638	649	0.9996452642781128	+	CGCCCCUCCCCGCCCUUUGACCUCAUU	471	1650	3180	202	334	195	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9011782-9012203	Cluster_2880	Pocillopora_meandrina_HIv1___Sc0000007	9011782	9012203	422	137	45	0.051094890510948905	-	UCGAAUCCGGCUCGAAGGACCA	31	42	13	6	35	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9051304-9051719	Cluster_2881	Pocillopora_meandrina_HIv1___Sc0000007	9051304	9051719	416	182	11	0.0	-	GAGCGUGCUCUUAACC	63	182	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9075748-9076178	Cluster_2882	Pocillopora_meandrina_HIv1___Sc0000007	9075748	9076178	431	521	74	0.007677543186180422	-	UGACAAUCAUGCUGCUAAGUUCCUACGC	150	2	516	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9143220-9143648	Cluster_2883	Pocillopora_meandrina_HIv1___Sc0000007	9143220	9143648	429	350	110	0.03142857142857143	-	AAUGGGAAAACGAGAACAGCGUGA	37	4	166	8	3	65	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9194835-9195263	Cluster_2884	Pocillopora_meandrina_HIv1___Sc0000007	9194835	9195263	429	162	27	0.0	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	90	0	160	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9448844-9449271	Cluster_2885	Pocillopora_meandrina_HIv1___Sc0000007	9448844	9449271	428	195	87	0.9794871794871794	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	41	2	184	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9521198-9521612	Cluster_2886	Pocillopora_meandrina_HIv1___Sc0000007	9521198	9521612	415	122	72	0.9836065573770492	+	UGAGUAAAGAUUGUUAGAAACUGUUUC	9	0	111	3	4	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9521676-9522721	Cluster_2887	Pocillopora_meandrina_HIv1___Sc0000007	9521676	9522721	1046	2481	772	0.9355098750503829	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	258	68	2294	9	19	36	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9522737-9524224	Cluster_2888	Pocillopora_meandrina_HIv1___Sc0000007	9522737	9524224	1488	4001	1327	0.9002749312671832	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	136	68	3557	29	38	143	166	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9526546-9527203	Cluster_2889	Pocillopora_meandrina_HIv1___Sc0000007	9526546	9527203	658	330	162	0.34545454545454546	.	UUAUUUCACAUGAUUUGACAGAAGCCCU	24	26	269	4	1	7	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9960932-9961359	Cluster_2890	Pocillopora_meandrina_HIv1___Sc0000007	9960932	9961359	428	111	20	1.0	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCG	51	0	111	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:9992713-9993127	Cluster_2891	Pocillopora_meandrina_HIv1___Sc0000007	9992713	9993127	415	156	5	0.0	-	UCUGGAGUCUCGGCC	152	156	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10057321-10057751	Cluster_2892	Pocillopora_meandrina_HIv1___Sc0000007	10057321	10057751	431	440	100	0.006818181818181818	-	UAAGACUGACGAAGGCUAAGGUGAACAGC	99	9	420	1	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10058873-10059300	Cluster_2893	Pocillopora_meandrina_HIv1___Sc0000007	10058873	10059300	428	238	69	0.14705882352941177	-	UGUACUUUCUUUGGGCCAUGUAAUCU	43	4	225	5	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10064882-10065311	Cluster_2894	Pocillopora_meandrina_HIv1___Sc0000007	10064882	10065311	430	289	77	0.17647058823529413	-	UUGUCUGGAUUGUACACUUUGAAGUGCA	25	0	286	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10065356-10065769	Cluster_2895	Pocillopora_meandrina_HIv1___Sc0000007	10065356	10065769	414	193	99	0.9740932642487047	+	AAGGACCGCAGAGUUUUCCAGAUG	23	4	134	2	2	4	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10065934-10066449	Cluster_2896	Pocillopora_meandrina_HIv1___Sc0000007	10065934	10066449	516	1796	392	0.49665924276169265	.	GGAUGCUGAAACCAAUUGAUUAACUGAUC	280	13	1711	2	8	22	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10068802-10069228	Cluster_2897	Pocillopora_meandrina_HIv1___Sc0000007	10068802	10069228	427	110	26	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUG	44	0	104	0	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10079401-10079831	Cluster_2898	Pocillopora_meandrina_HIv1___Sc0000007	10079401	10079831	431	1018	100	0.9990176817288802	+	GGGAUGGACAGUGGUCCAAAAGAGGCUG	267	8	963	3	5	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10085918-10086347	Cluster_2899	Pocillopora_meandrina_HIv1___Sc0000007	10085918	10086347	430	314	66	1.0	+	GGGAUGGACAGUGGUCCAAAAGAGGCUA	119	6	298	1	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10152842-10153255	Cluster_2900	Pocillopora_meandrina_HIv1___Sc0000007	10152842	10153255	414	81	9	1.0	+	UUGCUACGAUCUUCU	45	79	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10261325-10261861	Cluster_2901	Pocillopora_meandrina_HIv1___Sc0000007	10261325	10261861	537	3139	669	0.11213762344695763	-	ACAAGCGAUAUGUGGACCUUGAUCGGCG	379	115	2831	25	33	36	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10262068-10262496	Cluster_2902	Pocillopora_meandrina_HIv1___Sc0000007	10262068	10262496	429	171	42	0.017543859649122806	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	64	0	159	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10448770-10449183	Cluster_2903	Pocillopora_meandrina_HIv1___Sc0000007	10448770	10449183	414	95	14	1.0	+	GAAACUGCGAAUGGCC	33	95	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10819467-10819894	Cluster_2904	Pocillopora_meandrina_HIv1___Sc0000007	10819467	10819894	428	197	78	0.15228426395939088	-	UUUCCGUUGCAUUAGAGGACUUCUUGUU	54	4	184	4	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10821461-10821888	Cluster_2905	Pocillopora_meandrina_HIv1___Sc0000007	10821461	10821888	428	108	8	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	61	0	108	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:10822956-10823396	Cluster_2906	Pocillopora_meandrina_HIv1___Sc0000007	10822956	10823396	441	1321	154	0.046934140802422405	-	UGCGAUCGCCAUGAAAUGAUUCUGGG	395	5	1285	1	9	2	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11000878-11001308	Cluster_2907	Pocillopora_meandrina_HIv1___Sc0000007	11000878	11001308	431	127	35	0.0	-	UAGGAUCGUUCUAGAAAACCAGCGUAAGAUG	53	0	125	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11011336-11011762	Cluster_2908	Pocillopora_meandrina_HIv1___Sc0000007	11011336	11011762	427	162	78	0.6975308641975309	.	UGUUCAACUCUUUCAAUGGCGGCUGUG	22	1	151	1	1	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11146444-11146933	Cluster_2909	Pocillopora_meandrina_HIv1___Sc0000007	11146444	11146933	490	392	133	0.07142857142857142	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	67	8	340	2	3	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11171896-11172325	Cluster_2910	Pocillopora_meandrina_HIv1___Sc0000007	11171896	11172325	430	662	106	0.04078549848942598	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	136	49	435	159	3	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11357092-11357518	Cluster_2911	Pocillopora_meandrina_HIv1___Sc0000007	11357092	11357518	427	227	136	0.8546255506607929	+	UGAGUCGAGGUUAUUCACAAUACGAGC	34	8	189	2	5	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11357756-11358413	Cluster_2912	Pocillopora_meandrina_HIv1___Sc0000007	11357756	11358413	658	1122	322	0.9153297682709447	+	UGAAGAGAUCCUGAUAUUCCAAUGGCG	104	6	1066	2	9	15	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11358633-11359290	Cluster_2913	Pocillopora_meandrina_HIv1___Sc0000007	11358633	11359290	658	626	320	0.6134185303514377	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	24	8	566	4	4	16	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11359313-11360083	Cluster_2914	Pocillopora_meandrina_HIv1___Sc0000007	11359313	11360083	771	2460	507	0.9154471544715447	+	UGGAUAUACGUACACAAUCUAGGCUAA	805	11	2377	11	7	15	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11760920-11761348	Cluster_2915	Pocillopora_meandrina_HIv1___Sc0000007	11760920	11761348	429	86	24	0.9883720930232558	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	0	84	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11764005-11764426	Cluster_2916	Pocillopora_meandrina_HIv1___Sc0000007	11764005	11764426	422	211	126	0.8720379146919431	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	15	3	203	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11764448-11764878	Cluster_2917	Pocillopora_meandrina_HIv1___Sc0000007	11764448	11764878	431	293	136	0.9453924914675768	+	UGAUAACUGUACUCUUGAAAUUCAUCG	19	3	284	0	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11769398-11769828	Cluster_2918	Pocillopora_meandrina_HIv1___Sc0000007	11769398	11769828	431	211	44	0.995260663507109	+	UGUGUGACUUUGUAUGUAUAUUGAGCGU	42	1	209	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11931412-11931839	Cluster_2919	Pocillopora_meandrina_HIv1___Sc0000007	11931412	11931839	428	95	25	0.06315789473684211	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	42	5	86	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:11943905-11944332	Cluster_2920	Pocillopora_meandrina_HIv1___Sc0000007	11943905	11944332	428	250	138	0.744	.	UAGGGCUAACGAACACUGGUUGGACAGU	47	16	194	26	6	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12003983-12004397	Cluster_2921	Pocillopora_meandrina_HIv1___Sc0000007	12003983	12004397	415	137	27	0.014598540145985401	-	GUCCUUCCGGCCGGA	92	137	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12067431-12068032	Cluster_2922	Pocillopora_meandrina_HIv1___Sc0000007	12067431	12068032	602	603	185	0.001658374792703151	-	UGAUGUUAUACUGUGAAAUCUCGUACCCGG	52	2	589	2	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12077062-12077488	Cluster_2923	Pocillopora_meandrina_HIv1___Sc0000007	12077062	12077488	427	246	70	0.9959349593495935	+	UAUUACGGCUGUUGACUAUCCUUG	52	28	131	7	3	5	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12231846-12232275	Cluster_2924	Pocillopora_meandrina_HIv1___Sc0000007	12231846	12232275	430	272	41	0.7389705882352942	.	UACCAUAGAACUUUCCAGAACAUUUCAUC	95	0	263	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12251246-12251725	Cluster_2925	Pocillopora_meandrina_HIv1___Sc0000007	12251246	12251725	480	157695	4219	0.0015789974317511652	-	GUGGUCCGGACGGUCGAGGGUUAUCAAUCC	12389	26581	117459	2638	3225	3179	4613	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12429572-12429986	Cluster_2926	Pocillopora_meandrina_HIv1___Sc0000007	12429572	12429986	415	125	18	0.992	+	GUGUAGAAUAAGUGA	55	121	1	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12436572-12437198	Cluster_2927	Pocillopora_meandrina_HIv1___Sc0000007	12436572	12437198	627	999	296	0.2832832832832833	.	UUAUACUUUAGAAUCUGAAGAGUGCUCGUC	52	19	940	9	6	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12437500-12438544	Cluster_2928	Pocillopora_meandrina_HIv1___Sc0000007	12437500	12438544	1045	1717	473	0.30227140361094934	.	UGUAACUUUGAGCUUCUUUUUUGCAGGA	252	14	1638	0	8	29	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12450169-12450576	Cluster_2929	Pocillopora_meandrina_HIv1___Sc0000007	12450169	12450576	408	161	92	0.006211180124223602	-	UUGGCUCUUUCACUUCGAACUGAUUUUGA	10	0	156	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12458859-12459273	Cluster_2930	Pocillopora_meandrina_HIv1___Sc0000007	12458859	12459273	415	124	18	0.0	-	UCACGUCGGGGUCACA	51	124	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12492901-12493331	Cluster_2931	Pocillopora_meandrina_HIv1___Sc0000007	12492901	12493331	431	633	103	0.9605055292259084	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	296	5	618	0	1	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12497064-12497660	Cluster_2932	Pocillopora_meandrina_HIv1___Sc0000007	12497064	12497660	597	920	194	0.06086956521739131	-	UCUUAACUGUUAUCUUGGGCGCAGGAGC	177	6	900	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12497864-12498464	Cluster_2933	Pocillopora_meandrina_HIv1___Sc0000007	12497864	12498464	601	1253	285	0.2849162011173184	.	CACGAUCUCAUUGUGAAGAAGUUCAAAGA	226	20	1214	2	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12509623-12510050	Cluster_2934	Pocillopora_meandrina_HIv1___Sc0000007	12509623	12510050	428	138	49	0.09420289855072464	-	UGAACGCAGAACAGUAGGCCCGUUGGUGA	25	5	126	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12510339-12510869	Cluster_2935	Pocillopora_meandrina_HIv1___Sc0000007	12510339	12510869	531	565	125	0.13805309734513274	-	UGAAAACUUUGAACAGACUUUACCUGAAAA	132	2	554	1	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12517058-12517588	Cluster_2936	Pocillopora_meandrina_HIv1___Sc0000007	12517058	12517588	531	593	259	0.00505902192242833	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	34	5	576	2	3	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12517709-12518138	Cluster_2937	Pocillopora_meandrina_HIv1___Sc0000007	12517709	12518138	430	554	121	0.01444043321299639	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	116	3	544	0	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12521364-12521816	Cluster_2938	Pocillopora_meandrina_HIv1___Sc0000007	12521364	12521816	453	628	276	0.1942675159235669	-	UAUACCUUUGAUUCAUAGCCUUUCUGAU	27	16	556	8	4	8	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12522582-12523010	Cluster_2939	Pocillopora_meandrina_HIv1___Sc0000007	12522582	12523010	429	439	116	0.03416856492027335	-	UGUAGAAUCAAUCUGUUACUAAGACACC	102	4	421	5	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12538793-12539221	Cluster_2940	Pocillopora_meandrina_HIv1___Sc0000007	12538793	12539221	429	110	18	0.0	-	UGAGUUCUACUGUAACGACUGAAUAGACU	39	0	106	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12539423-12539837	Cluster_2941	Pocillopora_meandrina_HIv1___Sc0000007	12539423	12539837	415	81	28	0.012345679012345678	-	UGCGAAAUGGAUUAUUUACUCUCGGCGGGC	14	2	78	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12541488-12541918	Cluster_2942	Pocillopora_meandrina_HIv1___Sc0000007	12541488	12541918	431	513	96	0.021442495126705652	-	UUGGAAUUCGAAGCAAGUAGCAAUAGA	120	26	421	2	1	3	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12543827-12544865	Cluster_2943	Pocillopora_meandrina_HIv1___Sc0000007	12543827	12544865	1039	3962	833	0.017920242301867742	-	UAUUACACUGUGUCAAAUAGCGUGCCUGA	607	42	3842	15	11	23	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12544927-12545354	Cluster_2944	Pocillopora_meandrina_HIv1___Sc0000007	12544927	12545354	428	219	71	0.0091324200913242	-	CUCCUGACUGGCGCU	53	60	153	0	6	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12560397-12560811	Cluster_2945	Pocillopora_meandrina_HIv1___Sc0000007	12560397	12560811	415	5145	58	0.9994169096209913	+	GUGGUCGAGGCGAGA	4741	5142	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12573621-12574763	Cluster_2946	Pocillopora_meandrina_HIv1___Sc0000007	12573621	12574763	1143	2134	457	0.08622305529522024	-	UAUGUGUAUUAUUCUUGUUGCUAACAUCA	448	33	1912	10	60	79	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12578997-12579419	Cluster_2947	Pocillopora_meandrina_HIv1___Sc0000007	12578997	12579419	423	86	27	0.011627906976744186	-	UCUGGCAGCUCUUGCGAUUUCCUGUAAAG	33	2	80	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12585902-12586630	Cluster_2948	Pocillopora_meandrina_HIv1___Sc0000007	12585902	12586630	729	857	233	0.03267211201866978	-	UACAAACAACAGAAUGUUCGAACGGCUCGAC	100	25	818	5	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12590176-12590607	Cluster_2949	Pocillopora_meandrina_HIv1___Sc0000007	12590176	12590607	432	910	155	0.027472527472527472	-	UGAUAUACUGUGCAAGAGCCUGUAAA	291	7	849	2	5	43	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12591473-12591879	Cluster_2950	Pocillopora_meandrina_HIv1___Sc0000007	12591473	12591879	407	134	65	0.44029850746268656	.	GGAAAUAUCAAGUAAAGAUCGGCCGUCAUG	16	17	113	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12595830-12596316	Cluster_2951	Pocillopora_meandrina_HIv1___Sc0000007	12595830	12596316	487	4042	260	0.008411677387431964	-	UGGUUUGAUUGUCAGCAGUAGAUGAAAUG	1280	51	3896	13	10	10	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12596390-12597446	Cluster_2952	Pocillopora_meandrina_HIv1___Sc0000007	12596390	12597446	1057	14713	697	0.0010874736627472304	-	UCAUAAACUCAUUGAUCCUCUUAACAU	5348	70	14446	20	11	90	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12597448-12598169	Cluster_2953	Pocillopora_meandrina_HIv1___Sc0000007	12597448	12598169	722	670	190	0.022388059701492536	-	UUCAGGUAUUAGAUUCUGCCCCUCUGCACA	82	19	639	0	4	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12598811-12601054	Cluster_2954	Pocillopora_meandrina_HIv1___Sc0000007	12598811	12601054	2244	7392	2200	0.07805735930735931	-	UAUGUACGAUUUUAACUGGAAGAAACGUU	338	161	6927	27	43	71	163	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12601338-12601763	Cluster_2955	Pocillopora_meandrina_HIv1___Sc0000007	12601338	12601763	426	122	66	0.00819672131147541	-	UUUAUACGGUCUUUUUUCUUUGGGAUUUGA	15	2	117	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12607904-12608331	Cluster_2956	Pocillopora_meandrina_HIv1___Sc0000007	12607904	12608331	428	189	74	0.0	-	UCUGCUAUCUGACGCUCUGAACACUGGUC	30	2	185	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12608475-12609228	Cluster_2957	Pocillopora_meandrina_HIv1___Sc0000007	12608475	12609228	754	5906	484	0.01202167287504233	-	UGAACGAUCUUCUCACCAUCUCUUCUGGAA	1435	26	5833	9	2	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12616872-12617385	Cluster_2958	Pocillopora_meandrina_HIv1___Sc0000007	12616872	12617385	514	1031	258	0.14354995150339475	-	UAUCUCUCCCUUGAAAGCUUAUUUGGGUU	165	23	957	6	4	7	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12617410-12617991	Cluster_2959	Pocillopora_meandrina_HIv1___Sc0000007	12617410	12617991	582	2459	382	0.036600244001626675	-	UAUCUCUCCCUUGAAAGCUUAUUUUGGUU	846	22	2327	12	16	33	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12619579-12620456	Cluster_2960	Pocillopora_meandrina_HIv1___Sc0000007	12619579	12620456	878	1174	393	0.008517887563884156	-	UCCGAUCUGGGGACCAAACCAUAACCUUUC	67	13	1138	7	3	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12624822-12625236	Cluster_2961	Pocillopora_meandrina_HIv1___Sc0000007	12624822	12625236	415	1251	56	0.9464428457234213	+	CUUUCCGAGGUCGCA	1123	1184	66	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12625344-12625932	Cluster_2962	Pocillopora_meandrina_HIv1___Sc0000007	12625344	12625932	589	612	259	0.0032679738562091504	-	UCCUGAGAGCCUACAGGCAAAGAGAUUGUG	25	9	591	2	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12626251-12626661	Cluster_2963	Pocillopora_meandrina_HIv1___Sc0000007	12626251	12626661	411	183	77	0.01092896174863388	-	UCUGUAAUGGCUUCUGAGUUGCAACUAGC	19	7	172	0	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12627062-12627490	Cluster_2964	Pocillopora_meandrina_HIv1___Sc0000007	12627062	12627490	429	294	100	0.0	-	UUCGAUCACAUCAGGAGAACUUCCAAGGC	38	6	284	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12627799-12628228	Cluster_2965	Pocillopora_meandrina_HIv1___Sc0000007	12627799	12628228	430	357	73	0.008403361344537815	-	UAAUCUAAAUCAGGCUCCGGAAGUCCAAUU	173	6	349	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12631368-12631796	Cluster_2966	Pocillopora_meandrina_HIv1___Sc0000007	12631368	12631796	429	153	70	0.006535947712418301	-	UCUUCCAUAUGUUGGCAACUGUUGUAGUC	28	4	149	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12639716-12640228	Cluster_2967	Pocillopora_meandrina_HIv1___Sc0000007	12639716	12640228	513	3772	384	0.001325556733828208	-	UCAGUAACUGACCCAGGAUCUUGCUCUUC	1092	26	3672	19	9	7	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12642478-12642981	Cluster_2968	Pocillopora_meandrina_HIv1___Sc0000007	12642478	12642981	504	267	130	0.00749063670411985	-	UGAUUUGUACGUACAGGGCUUGAUCACGUG	26	11	248	0	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12647061-12647489	Cluster_2969	Pocillopora_meandrina_HIv1___Sc0000007	12647061	12647489	429	246	56	0.0040650406504065045	-	UUCCUGUAACACUUUCACAGAUGCUGACA	104	31	203	0	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12648700-12649127	Cluster_2970	Pocillopora_meandrina_HIv1___Sc0000007	12648700	12649127	428	132	26	0.015151515151515152	-	UGGUUUCUGGAACUGGAGAUCAAGGAGU	81	7	124	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12699562-12699991	Cluster_2971	Pocillopora_meandrina_HIv1___Sc0000007	12699562	12699991	430	546	43	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	310	2	517	0	7	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12746813-12747238	Cluster_2972	Pocillopora_meandrina_HIv1___Sc0000007	12746813	12747238	426	572	66	0.0	-	UGGGAAUACCCCGUGUUGUAGGCA	59	205	142	23	56	63	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12839525-12839948	Cluster_2973	Pocillopora_meandrina_HIv1___Sc0000007	12839525	12839948	424	16239	136	0.00012316029312149762	-	CCGUGUUGUAGGCUU	10214	16150	50	8	8	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12853897-12855168	Cluster_2974	Pocillopora_meandrina_HIv1___Sc0000007	12853897	12855168	1272	1251	493	0.08633093525179857	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	86	10	1173	7	1	20	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12855655-12856465	Cluster_2975	Pocillopora_meandrina_HIv1___Sc0000007	12855655	12856465	811	1170	344	0.09316239316239316	-	UGAAAAUCACUCUGUCCACAUUGAAU	172	21	1059	3	15	42	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12856549-12857028	Cluster_2976	Pocillopora_meandrina_HIv1___Sc0000007	12856549	12857028	480	317	134	0.0914826498422713	-	UCCAAUCACACACAGUUCUCCUGCGGC	72	1	301	2	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12857328-12858115	Cluster_2977	Pocillopora_meandrina_HIv1___Sc0000007	12857328	12858115	788	2067	615	0.10933720367682633	-	UGUUACCGGUCUUGCUAACCACUUGGA	184	29	1864	12	23	34	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12867093-12867895	Cluster_2978	Pocillopora_meandrina_HIv1___Sc0000007	12867093	12867895	803	1327	361	0.2705350414468726	.	UCAACCAUGAGAACAGAAAACAGAAGCA	93	19	1254	1	12	7	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12899034-12899568	Cluster_2979	Pocillopora_meandrina_HIv1___Sc0000007	12899034	12899568	535	1366	367	0.08857979502196194	-	UACGUUCCAAUUUUCUAGUAUCACUCGC	177	37	1227	5	10	51	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12940138-12941805	Cluster_2980	Pocillopora_meandrina_HIv1___Sc0000007	12940138	12941805	1668	12348	1704	0.10398445092322643	-	UAUAGAUGUAGCUCUUGGUAUGUGCCA	1931	81	11351	26	101	292	497	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12943889-12944684	Cluster_2981	Pocillopora_meandrina_HIv1___Sc0000007	12943889	12944684	796	3026	596	0.8017184401850628	+	AUUUCUUUCAAUUUGGACUCAGCGAUGGA	318	56	2701	22	24	58	165	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12945055-12945484	Cluster_2982	Pocillopora_meandrina_HIv1___Sc0000007	12945055	12945484	430	254	53	0.9921259842519685	+	UCCGAAUACACGUGGAAAGGAUAAUUGGGC	179	2	247	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12945924-12946595	Cluster_2983	Pocillopora_meandrina_HIv1___Sc0000007	12945924	12946595	672	885	205	0.9966101694915255	+	UGUUGCAAAAGCUAUGGAAAAGACACCACA	107	15	857	5	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12947360-12947787	Cluster_2984	Pocillopora_meandrina_HIv1___Sc0000007	12947360	12947787	428	4232	190	0.02008506616257089	-	UGUUACUGUAGAUGGGGUUUCCCUAGC	1243	11	3569	0	37	10	605	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12948352-12949360	Cluster_2985	Pocillopora_meandrina_HIv1___Sc0000007	12948352	12949360	1009	3457	783	0.8194966734162569	+	UGAUUGUACGCUUCCAGACUGCGAAAGG	501	56	3197	20	11	71	102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12960835-12961264	Cluster_2986	Pocillopora_meandrina_HIv1___Sc0000007	12960835	12961264	430	454	47	0.004405286343612335	-	UUGAAGACUUUGUGGAUGAAAAGCUAUG	118	3	447	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12962412-12962949	Cluster_2987	Pocillopora_meandrina_HIv1___Sc0000007	12962412	12962949	538	607	172	0.0	-	UGUAGAAAUCGCUUCAAGCUUACGGCUUAGA	57	9	584	0	8	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12980185-12980657	Cluster_2988	Pocillopora_meandrina_HIv1___Sc0000007	12980185	12980657	473	379	148	0.6068601583113457	.	AAGUAAAAAAGUGCGACUGAAGC	40	21	177	10	9	95	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12981420-12982492	Cluster_2989	Pocillopora_meandrina_HIv1___Sc0000007	12981420	12982492	1073	3941	509	0.914488708449632	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGCG	641	82	3476	8	26	124	225	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12987573-12989325	Cluster_2990	Pocillopora_meandrina_HIv1___Sc0000007	12987573	12989325	1753	22903	2403	0.027900275073134525	-	UUUUUCGAACAGAUCUUCUGGCCAAAGA	1879	172	21535	109	122	281	684	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12990601-12991441	Cluster_2991	Pocillopora_meandrina_HIv1___Sc0000007	12990601	12991441	841	23694	939	0.005528825863087701	-	UCGGUGUUAUGAUUGUUGAAACAGUCCA	14899	85	23184	54	186	118	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:12993685-12994114	Cluster_2992	Pocillopora_meandrina_HIv1___Sc0000007	12993685	12994114	430	686	205	0.6472303206997084	.	UUUACGAUCAUCUGACACCUCGUC	115	19	446	1	3	56	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13000411-13000840	Cluster_2993	Pocillopora_meandrina_HIv1___Sc0000007	13000411	13000840	430	241	102	0.029045643153526972	-	UGAAAGGAGAUUUAGUAGACUGAAGGAAC	39	1	225	0	4	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13000983-13001963	Cluster_2994	Pocillopora_meandrina_HIv1___Sc0000007	13000983	13001963	981	4997	680	0.004202521512907745	-	UUCACUCCAGAAUGUAGGACCUCUUUAGCC	269	73	4802	19	28	24	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13011618-13012043	Cluster_2995	Pocillopora_meandrina_HIv1___Sc0000007	13011618	13012043	426	128	42	0.0	-	UGAGAUUCAAAGGCUUGGGUAGACUU	23	2	126	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13012876-13013305	Cluster_2996	Pocillopora_meandrina_HIv1___Sc0000007	13012876	13013305	430	353	147	0.05099150141643059	-	UGAACAUUCCGGUAUUCUUUUCGCUGAAUU	57	4	336	2	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13013702-13014122	Cluster_2997	Pocillopora_meandrina_HIv1___Sc0000007	13013702	13014122	421	146	53	0.7876712328767124	.	AACGUAGCGAACUCGACAAGUAGC	31	9	34	48	1	13	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13014797-13015223	Cluster_2998	Pocillopora_meandrina_HIv1___Sc0000007	13014797	13015223	427	224	125	0.12946428571428573	-	UAUCAAGUGUUCCAGGAUUCUGUCGUC	13	4	200	2	2	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13020809-13021328	Cluster_2999	Pocillopora_meandrina_HIv1___Sc0000007	13020809	13021328	520	891	273	0.19865319865319866	-	UGAUAUGACCUUCGGCAAAAAACUGGA	99	13	772	4	2	28	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13021333-13022809	Cluster_3000	Pocillopora_meandrina_HIv1___Sc0000007	13021333	13022809	1477	2331	831	0.19862719862719863	-	UGUAACUGGUUCACUGCGAUUUUGUAGU	75	24	2049	14	14	71	159	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13024376-13025540	Cluster_3001	Pocillopora_meandrina_HIv1___Sc0000007	13024376	13025540	1165	2093	654	0.7219302436693741	.	UGCUUGUAGUUGGACCAUGUCUGUGACA	82	61	1848	7	20	34	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13025838-13026266	Cluster_3002	Pocillopora_meandrina_HIv1___Sc0000007	13025838	13026266	429	305	143	0.8918032786885246	+	UGAAGUAACUACGAACCCAUCUCGACCGU	20	2	289	0	4	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13026728-13027153	Cluster_3003	Pocillopora_meandrina_HIv1___Sc0000007	13026728	13027153	426	158	69	0.27848101265822783	.	GGAAAUAUCAAGUAA	15	34	117	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13031725-13032125	Cluster_3004	Pocillopora_meandrina_HIv1___Sc0000007	13031725	13032125	401	214	147	0.11214953271028037	-	UGGAAAUACUUAAAGGAGAUAAGACGU	11	7	189	6	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13032732-13033420	Cluster_3005	Pocillopora_meandrina_HIv1___Sc0000007	13032732	13033420	689	1013	334	0.14610069101678183	-	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	110	13	957	5	3	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13039656-13040080	Cluster_3006	Pocillopora_meandrina_HIv1___Sc0000007	13039656	13040080	425	145	65	0.8689655172413793	+	AGAGAUGAUAAGGGACCAGAUCGUUGAA	18	16	95	4	3	5	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13041094-13041498	Cluster_3007	Pocillopora_meandrina_HIv1___Sc0000007	13041094	13041498	405	236	112	0.13135593220338984	-	UGUUCGCGUAAUUCGGUAUGAAUUUGG	19	3	220	0	2	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13050160-13050588	Cluster_3008	Pocillopora_meandrina_HIv1___Sc0000007	13050160	13050588	429	112	37	0.0	-	UGAUAAUAUCGGACUGUCUCCUGUUGAGA	54	1	109	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13057558-13058799	Cluster_3009	Pocillopora_meandrina_HIv1___Sc0000007	13057558	13058799	1242	11043	1395	0.020918228742189623	-	UCUGACUGACUAACAGGAUAUCUGCUUC	726	53	10764	24	36	44	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13070719-13071146	Cluster_3010	Pocillopora_meandrina_HIv1___Sc0000007	13070719	13071146	428	387	122	0.0	-	UGGAUUGUCUUCAGUUGGGACGUGAUGC	151	1	378	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13071415-13071900	Cluster_3011	Pocillopora_meandrina_HIv1___Sc0000007	13071415	13071900	486	267	145	0.0	-	UCUGUUCUGGUUCGGGGUAGAUUCCCUGGC	12	4	259	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13084814-13085224	Cluster_3012	Pocillopora_meandrina_HIv1___Sc0000007	13084814	13085224	411	219	117	0.0273972602739726	-	UGAUACUGCAACUUCAUUUCUCUGGAAGA	16	3	207	1	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13086411-13086835	Cluster_3013	Pocillopora_meandrina_HIv1___Sc0000007	13086411	13086835	425	198	94	0.030303030303030304	-	UGUGAAGUGCUAACAAUGAUCUGAAGUGC	46	19	171	0	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13087131-13087891	Cluster_3014	Pocillopora_meandrina_HIv1___Sc0000007	13087131	13087891	761	282	109	0.014184397163120567	-	UGAUCUUUUUUGUUAGGACCUUCCUACUCUU	69	9	272	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13095270-13095698	Cluster_3015	Pocillopora_meandrina_HIv1___Sc0000007	13095270	13095698	429	257	131	0.15953307392996108	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	3	226	0	0	7	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13096929-13097630	Cluster_3016	Pocillopora_meandrina_HIv1___Sc0000007	13096929	13097630	702	312	168	0.08653846153846154	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	26	4	292	0	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13100219-13100648	Cluster_3017	Pocillopora_meandrina_HIv1___Sc0000007	13100219	13100648	430	163	62	0.018404907975460124	-	UGCACAGACUGACUUUGAAACAUCAAAUAUC	51	3	153	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13348977-13349391	Cluster_3018	Pocillopora_meandrina_HIv1___Sc0000007	13348977	13349391	415	172	13	0.005813953488372093	-	UGACAACUUUUGACA	104	171	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13478561-13478977	Cluster_3019	Pocillopora_meandrina_HIv1___Sc0000007	13478561	13478977	417	1278	20	0.000782472613458529	-	GAGUGUGCUCUUAACCA	894	1278	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000007:13555573-13556003	Cluster_3020	Pocillopora_meandrina_HIv1___Sc0000007	13555573	13556003	431	148	11	0.006756756756756757	-	UGAGUAAACCUUCUUUUAAAUUUGAACAUUU	70	0	148	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:144365-144794	Cluster_3021	Pocillopora_meandrina_HIv1___Sc0000008	144365	144794	430	189	53	0.010582010582010581	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	65	2	183	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:145548-146144	Cluster_3022	Pocillopora_meandrina_HIv1___Sc0000008	145548	146144	597	5602	491	0.0012495537308104248	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	863	13	5551	6	4	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:178210-178625	Cluster_3023	Pocillopora_meandrina_HIv1___Sc0000008	178210	178625	416	151	9	0.9735099337748344	+	UCUGGAGUCUCGGCA	72	149	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:234988-235415	Cluster_3024	Pocillopora_meandrina_HIv1___Sc0000008	234988	235415	428	130	40	0.015384615384615385	-	UGCUCAAUGUCCAGGACUCUCUCUGAGU	25	0	128	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:280280-280695	Cluster_3025	Pocillopora_meandrina_HIv1___Sc0000008	280280	280695	416	118	22	0.0	-	GAGAUUGCUGUAGGCU	27	118	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:597467-597881	Cluster_3026	Pocillopora_meandrina_HIv1___Sc0000008	597467	597881	415	2352	49	1.0	+	CCGUGUUGUAGGCUU	1749	2352	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:636585-637181	Cluster_3027	Pocillopora_meandrina_HIv1___Sc0000008	636585	637181	597	5658	526	0.003181336161187699	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	880	22	5598	3	5	7	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:806592-807009	Cluster_3028	Pocillopora_meandrina_HIv1___Sc0000008	806592	807009	418	142	8	0.014084507042253521	-	AAGGUGAACAAAGCGAUA	99	141	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:930863-931277	Cluster_3029	Pocillopora_meandrina_HIv1___Sc0000008	930863	931277	415	141	90	0.5531914893617021	.	UCCGAGUGGCUUUUUUAAAUCCUGUAAUA	8	8	92	0	8	14	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:960182-960609	Cluster_3030	Pocillopora_meandrina_HIv1___Sc0000008	960182	960609	428	164	28	0.9939024390243902	+	UAUUAUUCAUCUGCUGUCUUUUUGCCUC	59	1	161	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1007000-1007429	Cluster_3031	Pocillopora_meandrina_HIv1___Sc0000008	1007000	1007429	430	180	42	0.044444444444444446	-	UAAUGUGUGACUUUUUCGCUUUUGUUUUGA	73	2	177	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1058500-1058927	Cluster_3032	Pocillopora_meandrina_HIv1___Sc0000008	1058500	1058927	428	159	58	0.025157232704402517	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	41	0	152	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1087037-1087451	Cluster_3033	Pocillopora_meandrina_HIv1___Sc0000008	1087037	1087451	415	324	8	0.006172839506172839	-	CUUUCCGAGGUCGCA	306	323	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1311747-1312175	Cluster_3034	Pocillopora_meandrina_HIv1___Sc0000008	1311747	1312175	429	152	29	0.019736842105263157	-	AAGAUGUCGAGCGUUUUCCGAACGGAUUG	40	2	139	1	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1344660-1345210	Cluster_3035	Pocillopora_meandrina_HIv1___Sc0000008	1344660	1345210	551	352	72	0.019886363636363636	-	UUAUGAGUGAACCUUUCAUCGAGAAACAUG	60	6	343	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1357373-1357788	Cluster_3036	Pocillopora_meandrina_HIv1___Sc0000008	1357373	1357788	416	132	22	0.9924242424242424	+	GUAUCUGCACUUGACU	25	131	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1370425-1370839	Cluster_3037	Pocillopora_meandrina_HIv1___Sc0000008	1370425	1370839	415	245	16	0.04897959183673469	-	GUGGAAGGUAGGUCA	226	236	6	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1506278-1506707	Cluster_3038	Pocillopora_meandrina_HIv1___Sc0000008	1506278	1506707	430	271	50	0.0	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	98	3	267	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1603032-1603625	Cluster_3039	Pocillopora_meandrina_HIv1___Sc0000008	1603032	1603625	594	532	355	0.9830827067669173	+	UGCUGGCCAAUAACUC	12	244	142	46	33	38	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1604007-1604500	Cluster_3040	Pocillopora_meandrina_HIv1___Sc0000008	1604007	1604500	494	528	390	0.990530303030303	+	CAUGAUGUGAUUUCGGGACCGACU	8	162	226	27	37	29	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1604636-1605101	Cluster_3041	Pocillopora_meandrina_HIv1___Sc0000008	1604636	1605101	466	567	386	0.9911816578483245	+	CUGAUGAACUGACACGCCACAUGC	9	218	178	64	38	21	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1605572-1606131	Cluster_3042	Pocillopora_meandrina_HIv1___Sc0000008	1605572	1606131	560	538	302	0.9944237918215614	+	GAUGUUGACUGUUUAUCAAGGA	17	116	275	25	40	37	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1783802-1783891	Cluster_3043	Pocillopora_meandrina_HIv1___Sc0000008	1783802	1783891	90	1115	102	0.9964125560538116	+	UAUGUUUUGGCUUGUUCCCA	332	982	12	101	14	4	2	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:1803785-1804208	Cluster_3044	Pocillopora_meandrina_HIv1___Sc0000008	1803785	1804208	424	18190	244	0.9996151731720726	+	CAAUGUUUCGGCUUGUUCCCG	8846	2351	13	15084	345	385	12	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1917222-1917651	Cluster_3045	Pocillopora_meandrina_HIv1___Sc0000008	1917222	1917651	430	156	42	0.0	-	UGCAACAUGCUUUUUCAUCGUGCUGGACUG	43	1	153	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1921537-1922472	Cluster_3046	Pocillopora_meandrina_HIv1___Sc0000008	1921537	1922472	936	1207	375	0.01988400994200497	-	UGGUCACGUCAUACUUCUGAAUCUUCAAC	245	13	1165	2	3	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1929792-1930221	Cluster_3047	Pocillopora_meandrina_HIv1___Sc0000008	1929792	1930221	430	312	90	0.07692307692307693	-	UGAACAAGUGAGCAAGAUGAUCUUCAUGAA	119	2	299	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1931349-1931776	Cluster_3048	Pocillopora_meandrina_HIv1___Sc0000008	1931349	1931776	428	143	42	0.006993006993006993	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	17	1	135	1	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1933348-1934417	Cluster_3049	Pocillopora_meandrina_HIv1___Sc0000008	1933348	1934417	1070	3816	777	0.3275681341719078	.	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	322	55	3607	27	16	60	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1940796-1941223	Cluster_3050	Pocillopora_meandrina_HIv1___Sc0000008	1940796	1941223	428	86	22	0.9883720930232558	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	23	0	84	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1947797-1948209	Cluster_3051	Pocillopora_meandrina_HIv1___Sc0000008	1947797	1948209	413	122	59	0.0	-	UGUGACUCUGGCUUGUAGAGAGAUUCUGG	10	3	118	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1982269-1982694	Cluster_3052	Pocillopora_meandrina_HIv1___Sc0000008	1982269	1982694	426	126	51	0.023809523809523808	-	UUGGAAGAUUUUGUAGACACAACUGACA	43	3	114	2	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1986496-1986975	Cluster_3053	Pocillopora_meandrina_HIv1___Sc0000008	1986496	1986975	480	5428	319	0.8212969786293294	+	UAUGUUCAGGUUGGGCGAGAUGGAUUCGUC	1258	62	5281	16	14	20	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:1988271-1990998	Cluster_3054	Pocillopora_meandrina_HIv1___Sc0000008	1988271	1990998	2728	10000	2091	0.0063	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1297	178	9616	19	52	35	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2002299-2002723	Cluster_3055	Pocillopora_meandrina_HIv1___Sc0000008	2002299	2002723	425	190	64	0.010526315789473684	-	UGCUCUGAUUGUCUGGCCUUGACCCAGUU	29	4	182	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2004591-2005854	Cluster_3056	Pocillopora_meandrina_HIv1___Sc0000008	2004591	2005854	1264	10483	956	0.05628159877897548	-	UAUUGACAAUGAAUUCGAGACUGACAGUG	2427	94	9900	26	139	77	247	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2007397-2007827	Cluster_3057	Pocillopora_meandrina_HIv1___Sc0000008	2007397	2007827	431	6429	344	0.0007777259293824856	-	UUUGUCACCUCCUUGACUGCUCCUUGAC	1640	22	6311	6	9	5	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2012235-2013269	Cluster_3058	Pocillopora_meandrina_HIv1___Sc0000008	2012235	2013269	1035	2973	583	0.011772620248906828	-	UAUGUCAACUGCUGUCCCUUCUUUUAAAU	853	55	2780	20	23	40	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2013407-2013885	Cluster_3059	Pocillopora_meandrina_HIv1___Sc0000008	2013407	2013885	479	4724	290	0.009949195596951736	-	UUGUCUACAAGAAGCCUGUCCAUUUUGU	3508	250	4433	9	7	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2013935-2014362	Cluster_3060	Pocillopora_meandrina_HIv1___Sc0000008	2013935	2014362	428	377	53	0.0	-	UAGUCCUAAUCAGUCAUUAAAUUUGGUU	186	0	374	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2018903-2019724	Cluster_3061	Pocillopora_meandrina_HIv1___Sc0000008	2018903	2019724	822	41510	1309	0.0027945073476270776	-	UUUCCGUUGCAUUUGAAGACUUCUUGUUAGA	15380	157	40791	146	97	90	229	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2019808-2021489	Cluster_3062	Pocillopora_meandrina_HIv1___Sc0000008	2019808	2021489	1682	2002	822	0.18181818181818182	-	UCUAACGCGUUUGUCUGACAUCCCUUU	146	41	1789	22	33	32	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2022214-2022636	Cluster_3063	Pocillopora_meandrina_HIv1___Sc0000008	2022214	2022636	423	168	80	0.08333333333333333	-	UGACGUCACGAUCUUUGCGCGCUACCAUU	19	6	151	1	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2030130-2031953	Cluster_3064	Pocillopora_meandrina_HIv1___Sc0000008	2030130	2031953	1824	26494	3082	0.06695855665433684	-	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2237	256	25061	88	140	365	584	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2032341-2036047	Cluster_3065	Pocillopora_meandrina_HIv1___Sc0000008	2032341	2036047	3707	91976	4531	0.18381969209358964	-	CACCAAGGUCUUGUAGUCCAGUACAACU	26800	717	88468	240	302	397	1852	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2038372-2038801	Cluster_3066	Pocillopora_meandrina_HIv1___Sc0000008	2038372	2038801	430	460	113	0.013043478260869565	-	UCAACAGCCUGAACUUGUCUUCACAAGACU	107	14	441	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2046341-2046741	Cluster_3067	Pocillopora_meandrina_HIv1___Sc0000008	2046341	2046741	401	119	60	0.01680672268907563	-	UAAUCUGUCUGUUUCUCGGUCGAAGAAUC	34	4	113	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2047846-2048274	Cluster_3068	Pocillopora_meandrina_HIv1___Sc0000008	2047846	2048274	429	236	124	0.1271186440677966	-	UGUGUGCCUUUCUGAGCUGUCUGAUUUC	15	30	198	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2098378-2098857	Cluster_3069	Pocillopora_meandrina_HIv1___Sc0000008	2098378	2098857	480	12626	953	0.0003168065895770632	-	UACAAACAAGUUAAAAUUCUGAGCAGG	693	3962	5883	697	298	734	1052	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2099154-2099629	Cluster_3070	Pocillopora_meandrina_HIv1___Sc0000008	2099154	2099629	476	14558	707	0.0	-	CUGCGAUGAUGACUUAACUUAGGACA	4179	4331	7363	907	380	558	1019	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2104385-2104865	Cluster_3071	Pocillopora_meandrina_HIv1___Sc0000008	2104385	2104865	481	1551	345	0.0006447453255963894	-	UGUGGUGAUGACUUAACUUAGGACA	264	452	702	69	86	115	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2226362-2226785	Cluster_3072	Pocillopora_meandrina_HIv1___Sc0000008	2226362	2226785	424	221	141	0.9728506787330317	+	GACGAUGAUUGUCACUACGUGGUU	32	54	65	14	22	13	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2226881-2227306	Cluster_3073	Pocillopora_meandrina_HIv1___Sc0000008	2226881	2227306	426	263	173	0.9961977186311787	+	AUUCGAUCAGAGAUGGACA	13	92	57	31	51	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2242788-2244155	Cluster_3074	Pocillopora_meandrina_HIv1___Sc0000008	2242788	2244155	1368	4007	928	0.1929124032942351	-	UGCUGCAUGUCUACUUGUCGAAGUCCUGGC	247	77	3301	41	22	160	406	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2244212-2244632	Cluster_3075	Pocillopora_meandrina_HIv1___Sc0000008	2244212	2244632	421	128	63	0.25	.	UAGAAUCUCUUCACCUAUAUGCAUCAU	27	1	123	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2257513-2258066	Cluster_3076	Pocillopora_meandrina_HIv1___Sc0000008	2257513	2258066	554	342	164	0.6754385964912281	.	UGACUUUAUUUGCGUCACGGAUUAGCUGG	24	6	267	5	12	28	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2284794-2285207	Cluster_3077	Pocillopora_meandrina_HIv1___Sc0000008	2284794	2285207	414	80	20	0.025	-	AGUGCUCUUAACUGA	25	80	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2292406-2292823	Cluster_3078	Pocillopora_meandrina_HIv1___Sc0000008	2292406	2292823	418	679	40	0.9985272459499264	+	GCGACUGCUGCCGAU	331	677	0	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2517345-2517765	Cluster_3079	Pocillopora_meandrina_HIv1___Sc0000008	2517345	2517765	421	128	65	0.0	-	AGUGGUGAUGAAAUUUUUGGU	9	39	38	14	19	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2593578-2594011	Cluster_3080	Pocillopora_meandrina_HIv1___Sc0000008	2593578	2594011	434	1054	182	0.05313092979127135	-	UGUUUCAACUCUUGAAUGAUUCUUGCUU	142	0	1027	6	1	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2645329-2645744	Cluster_3081	Pocillopora_meandrina_HIv1___Sc0000008	2645329	2645744	416	115	16	0.034782608695652174	-	GAGUGUGCUUUUAACC	37	112	1	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2699173-2699588	Cluster_3082	Pocillopora_meandrina_HIv1___Sc0000008	2699173	2699588	416	207	13	0.0	-	GACGGAGCUUGGAGCA	104	207	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2703702-2704150	Cluster_3083	Pocillopora_meandrina_HIv1___Sc0000008	2703702	2704150	449	1007	157	0.20556107249255212	.	UAGGAUAUAUCACUUGCGUAAUUUACA	210	27	941	3	12	13	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2818399-2818824	Cluster_3084	Pocillopora_meandrina_HIv1___Sc0000008	2818399	2818824	426	127	41	0.9921259842519685	+	UGAACUACUGCUCGUACUCUAGAUGACA	25	1	126	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:2892861-2893279	Cluster_3085	Pocillopora_meandrina_HIv1___Sc0000008	2892861	2893279	419	406	40	0.0024630541871921183	-	UCUUGAUGUUUGAGC	72	402	0	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3044995-3045591	Cluster_3086	Pocillopora_meandrina_HIv1___Sc0000008	3044995	3045591	597	5599	523	0.003572066440435792	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	832	13	5532	2	5	17	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3152146-3152627	Cluster_3087	Pocillopora_meandrina_HIv1___Sc0000008	3152146	3152627	482	487	184	0.004106776180698152	-	UACAAAGCUCUCACGAAUUCACAAACAGA	66	3	480	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3153034-3153894	Cluster_3088	Pocillopora_meandrina_HIv1___Sc0000008	3153034	3153894	861	1192	408	0.003355704697986577	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	84	9	1166	3	2	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3154288-3155155	Cluster_3089	Pocillopora_meandrina_HIv1___Sc0000008	3154288	3155155	868	886	395	0.013544018058690745	-	UGCUGAAACGAUUUUGACAGGUUGUCA	63	9	843	3	9	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3155589-3156025	Cluster_3090	Pocillopora_meandrina_HIv1___Sc0000008	3155589	3156025	437	847	254	0.0059031877213695395	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	115	5	830	3	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3175109-3175522	Cluster_3091	Pocillopora_meandrina_HIv1___Sc0000008	3175109	3175522	414	81	15	0.0	-	CGGAAUGCGAGUGCA	33	81	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3489845-3490272	Cluster_3092	Pocillopora_meandrina_HIv1___Sc0000008	3489845	3490272	428	156	47	1.0	+	UCCGAUUCAGACUCCGAACUUGAUUUUGA	40	10	139	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3576420-3576514	Cluster_3093	Pocillopora_meandrina_HIv1___Sc0000008	3576420	3576514	95	301	50	1.0	+	CGAUGGAACACACAAGUAGAGA	89	37	9	14	180	59	2	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:3603048-3603467	Cluster_3094	Pocillopora_meandrina_HIv1___Sc0000008	3603048	3603467	420	253	6	0.0	-	UAUGUUGCUCGGGUUUUUGA	248	250	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3619341-3619435	Cluster_3095	Pocillopora_meandrina_HIv1___Sc0000008	3619341	3619435	95	472	75	0.00423728813559322	-	UGUGCUUUGGUUCAAAAAUGUC	145	173	6	16	210	55	12	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:3682573-3683023	Cluster_3096	Pocillopora_meandrina_HIv1___Sc0000008	3682573	3683023	451	633	95	1.0	+	UCUUGGAGUGUAUCUACAUGAGU	105	83	130	105	132	177	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3792737-3793150	Cluster_3097	Pocillopora_meandrina_HIv1___Sc0000008	3792737	3793150	414	391	286	0.01278772378516624	-	UCAAAGACUGAGGCCAGCAAGACUGAAGA	11	118	152	23	31	41	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3806432-3807174	Cluster_3098	Pocillopora_meandrina_HIv1___Sc0000008	3806432	3807174	743	1127	432	0.00709849157054126	-	UGCUGGCUGAUGGCU	56	496	277	94	69	118	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3945942-3946359	Cluster_3099	Pocillopora_meandrina_HIv1___Sc0000008	3945942	3946359	418	206	108	0.9854368932038835	+	UGUCAUAACGCUCUGUCCGAUCGCUGUA	11	6	194	3	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3947424-3947852	Cluster_3100	Pocillopora_meandrina_HIv1___Sc0000008	3947424	3947852	429	380	104	0.9947368421052631	+	UCUGACCCGUCACUGAAUAUGAUAAGAGU	98	1	368	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3948492-3949248	Cluster_3101	Pocillopora_meandrina_HIv1___Sc0000008	3948492	3949248	757	500	260	0.98	+	UGAUUUUGAUAAACUCUGCUAUGUUCGGGA	37	10	476	4	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3949632-3950045	Cluster_3102	Pocillopora_meandrina_HIv1___Sc0000008	3949632	3950045	414	227	132	0.9779735682819384	+	UGUCGUGUCUUUCAUCCGCUGUGGCGUA	11	20	198	0	4	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3950885-3951344	Cluster_3103	Pocillopora_meandrina_HIv1___Sc0000008	3950885	3951344	460	751	208	0.16644474034620507	-	UAAACAACAGAAAGUCCUUUGAAACGUG	182	7	735	3	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3961410-3963407	Cluster_3104	Pocillopora_meandrina_HIv1___Sc0000008	3961410	3963407	1998	4030	1362	0.10074441687344914	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	367	44	3744	32	20	63	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3963414-3963841	Cluster_3105	Pocillopora_meandrina_HIv1___Sc0000008	3963414	3963841	428	329	170	0.13069908814589665	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	45	2	301	1	6	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3963959-3964385	Cluster_3106	Pocillopora_meandrina_HIv1___Sc0000008	3963959	3964385	427	159	77	0.06918238993710692	-	UGAACUUCUCGGCUCCAAACACUAUGG	50	1	150	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3964401-3964832	Cluster_3107	Pocillopora_meandrina_HIv1___Sc0000008	3964401	3964832	432	478	190	0.043933054393305436	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	49	5	455	1	1	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3965118-3966291	Cluster_3108	Pocillopora_meandrina_HIv1___Sc0000008	3965118	3966291	1174	901	360	0.06104328523862375	-	UAAGUGCGCUCUCAUGUAGAUAUAUGGG	99	15	820	3	12	23	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:3980226-3980655	Cluster_3109	Pocillopora_meandrina_HIv1___Sc0000008	3980226	3980655	430	4236	247	0.0033050047214353163	-	GGUUUCGUAGUGUAGU	917	3678	510	8	10	26	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4396995-4397415	Cluster_3110	Pocillopora_meandrina_HIv1___Sc0000008	4396995	4397415	421	124	28	0.024193548387096774	-	CGUAGAAUGACUGUUACCA	28	47	25	17	2	7	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4433244-4433661	Cluster_3111	Pocillopora_meandrina_HIv1___Sc0000008	4433244	4433661	418	96	15	1.0	+	AACUGUCUGAGUGUCUAU	58	93	1	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4541060-4541481	Cluster_3112	Pocillopora_meandrina_HIv1___Sc0000008	4541060	4541481	422	183	119	0.9890710382513661	+	AGGGCAAGAACUGUCGAAGACA	14	48	63	6	24	26	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4701279-4701707	Cluster_3113	Pocillopora_meandrina_HIv1___Sc0000008	4701279	4701707	429	135	19	0.9703703703703703	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	47	0	135	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:4946465-4946893	Cluster_3114	Pocillopora_meandrina_HIv1___Sc0000008	4946465	4946893	429	259	22	0.9922779922779923	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	101	0	253	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5387738-5387830	Cluster_3115	Pocillopora_meandrina_HIv1___Sc0000008	5387738	5387830	93	1515	135	0.0019801980198019802	-	AACUUUUCUACAAUUCCAGUGGA	265	278	38	126	384	641	48	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000008:5481836-5482255	Cluster_3116	Pocillopora_meandrina_HIv1___Sc0000008	5481836	5482255	420	1384	82	1.0	+	CUUGAAGCGGUUGGAUCA	371	1379	5	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5492891-5493311	Cluster_3117	Pocillopora_meandrina_HIv1___Sc0000008	5492891	5493311	421	328	19	1.0	+	CGGCUUGAAAAAAAAAAAAAA	84	208	0	90	29	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5501737-5502153	Cluster_3118	Pocillopora_meandrina_HIv1___Sc0000008	5501737	5502153	417	2915	26	0.9996569468267581	+	GCGGAUGUGGCGGAAU	1768	2914	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5589033-5589448	Cluster_3119	Pocillopora_meandrina_HIv1___Sc0000008	5589033	5589448	416	117	71	0.18803418803418803	-	UUCUAGACGAGAUCUUUAGUAAAAAGCA	9	16	88	6	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5816867-5817285	Cluster_3120	Pocillopora_meandrina_HIv1___Sc0000008	5816867	5817285	419	132	9	1.0	+	CCGGGGGAGACGAUGAUUC	116	131	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:5996763-5997177	Cluster_3121	Pocillopora_meandrina_HIv1___Sc0000008	5996763	5997177	415	831	12	0.0	-	UCUGGAGUCUCGGCG	817	828	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6100492-6100916	Cluster_3122	Pocillopora_meandrina_HIv1___Sc0000008	6100492	6100916	425	420	70	0.9976190476190476	+	UGGAAAGUGCGUACGAACGAUUU	117	24	4	9	192	157	34	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6124721-6125148	Cluster_3123	Pocillopora_meandrina_HIv1___Sc0000008	6124721	6125148	428	447	59	0.0044742729306487695	-	UGAAAAGAACAAUGAUGUAGCUCGUGCA	324	7	431	1	0	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6125281-6125771	Cluster_3124	Pocillopora_meandrina_HIv1___Sc0000008	6125281	6125771	491	190	50	0.02631578947368421	-	UGAGAGUUACCACACAAUAAAAGAGUCAUU	38	7	180	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6180844-6181258	Cluster_3125	Pocillopora_meandrina_HIv1___Sc0000008	6180844	6181258	415	135	24	0.08888888888888889	-	CAGGUCUGUGAUGCA	79	125	6	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6307431-6308672	Cluster_3126	Pocillopora_meandrina_HIv1___Sc0000008	6307431	6308672	1242	11266	1546	0.029824249955618675	-	UCUGACUGACUAACAGGAUAUCUGCUUC	767	58	10938	27	41	60	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6310914-6311346	Cluster_3127	Pocillopora_meandrina_HIv1___Sc0000008	6310914	6311346	433	294	155	0.14625850340136054	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	44	3	269	3	3	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6312576-6313277	Cluster_3128	Pocillopora_meandrina_HIv1___Sc0000008	6312576	6313277	702	260	121	0.057692307692307696	-	UGUACUUUGUCUUUGUUGAAUUUGAUUC	29	5	244	0	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6470302-6470717	Cluster_3129	Pocillopora_meandrina_HIv1___Sc0000008	6470302	6470717	416	209	96	0.009569377990430622	-	GUGGUGGACUGCUUGA	79	139	39	6	10	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6495344-6495776	Cluster_3130	Pocillopora_meandrina_HIv1___Sc0000008	6495344	6495776	433	537	157	1.0	+	GCGGAUGUGGCGGAA	272	462	34	12	12	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6512829-6513235	Cluster_3131	Pocillopora_meandrina_HIv1___Sc0000008	6512829	6513235	407	200	141	0.0	-	GCGGAUGUGGCGGAA	16	111	43	15	12	13	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6516001-6516465	Cluster_3132	Pocillopora_meandrina_HIv1___Sc0000008	6516001	6516465	465	200	153	0.0	-	CGAAUGAUGAACAAUGAACGCUUC	4	62	73	15	15	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6516959-6517531	Cluster_3133	Pocillopora_meandrina_HIv1___Sc0000008	6516959	6517531	573	560	275	0.005357142857142857	-	GCGGAUGUGGCGGAA	129	399	88	23	15	12	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6523070-6523803	Cluster_3134	Pocillopora_meandrina_HIv1___Sc0000008	6523070	6523803	734	930	640	0.012903225806451613	-	GUGGAUGAUGACAAAA	13	369	288	85	60	69	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6645153-6645568	Cluster_3135	Pocillopora_meandrina_HIv1___Sc0000008	6645153	6645568	416	947	8	0.9978880675818373	+	CGAGUUAGAUAGAAUA	901	945	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6783256-6783685	Cluster_3136	Pocillopora_meandrina_HIv1___Sc0000008	6783256	6783685	430	248	27	0.0	-	AUGGCAAAAACACAUCUUACAUUGGCUGUA	185	25	221	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6870035-6870463	Cluster_3137	Pocillopora_meandrina_HIv1___Sc0000008	6870035	6870463	429	228	47	1.0	+	AAGUGUGAUCUUUCUCUUAUGUGGCUUUG	112	5	214	3	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6906017-6906501	Cluster_3138	Pocillopora_meandrina_HIv1___Sc0000008	6906017	6906501	485	2043	331	0.688203622124327	.	UCAGAUCGUAUUUCCUCAGUGUACCAUA	272	3	1972	3	11	12	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6913071-6913566	Cluster_3139	Pocillopora_meandrina_HIv1___Sc0000008	6913071	6913566	496	1071	75	0.976657329598506	+	UCACACCAAUGUCUUCAUCUGUUAGAGA	734	19	1033	4	0	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6918901-6919327	Cluster_3140	Pocillopora_meandrina_HIv1___Sc0000008	6918901	6919327	427	83	14	0.0	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	40	0	83	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:6948849-6949263	Cluster_3141	Pocillopora_meandrina_HIv1___Sc0000008	6948849	6949263	415	74	2	0.0	-	GAUGAGGCUCAUAAC	72	74	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7050066-7050481	Cluster_3142	Pocillopora_meandrina_HIv1___Sc0000008	7050066	7050481	416	104	26	1.0	+	CGCGGAGUUAAGGUGCA	44	92	3	3	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7168458-7168875	Cluster_3143	Pocillopora_meandrina_HIv1___Sc0000008	7168458	7168875	418	220	68	0.9772727272727273	+	GCUGCGAUGGCCGAGUGG	46	194	7	4	10	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7228614-7229032	Cluster_3144	Pocillopora_meandrina_HIv1___Sc0000008	7228614	7229032	419	118	72	0.923728813559322	+	CCGCAGCUCAGUGGGUAGAGCAUCUGACCG	7	37	48	12	10	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7351454-7351902	Cluster_3145	Pocillopora_meandrina_HIv1___Sc0000008	7351454	7351902	449	259	141	0.3552123552123552	.	UGCCGGUAUUCGAGAUUCCUUCCUCUU	13	9	229	1	0	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7352806-7353232	Cluster_3146	Pocillopora_meandrina_HIv1___Sc0000008	7352806	7353232	427	142	57	0.9577464788732394	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	46	0	137	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7654139-7654555	Cluster_3147	Pocillopora_meandrina_HIv1___Sc0000008	7654139	7654555	417	157	23	0.03184713375796178	-	AGGACCUCAGAUCAGGC	48	153	1	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7662276-7662690	Cluster_3148	Pocillopora_meandrina_HIv1___Sc0000008	7662276	7662690	415	121	14	0.9917355371900827	+	GAUUGAGAGCUCUUU	42	119	0	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7698373-7699671	Cluster_3149	Pocillopora_meandrina_HIv1___Sc0000008	7698373	7699671	1299	6609	1580	0.20683915872295355	.	UUUUACACGAUGCUUUGCUUUGGCCUG	369	78	5843	29	279	161	219	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7722490-7722905	Cluster_3150	Pocillopora_meandrina_HIv1___Sc0000008	7722490	7722905	416	82	27	0.9878048780487805	+	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	33	3	77	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:7924005-7924423	Cluster_3151	Pocillopora_meandrina_HIv1___Sc0000008	7924005	7924423	419	464	61	1.0	+	UGUCUGUCUGAGUGUCUGU	70	461	1	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8271763-8272196	Cluster_3152	Pocillopora_meandrina_HIv1___Sc0000008	8271763	8272196	434	766	90	0.02349869451697128	-	UGAAGUUAUCCUAAACUGCAGACUUAGC	208	6	750	3	5	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8294890-8295317	Cluster_3153	Pocillopora_meandrina_HIv1___Sc0000008	8294890	8295317	428	108	21	0.9722222222222222	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	38	0	107	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8299092-8299520	Cluster_3154	Pocillopora_meandrina_HIv1___Sc0000008	8299092	8299520	429	195	66	0.0	-	UGUAUUUACAUUGUAUUGUGAUCGAGACUUG	23	2	192	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8324513-8324978	Cluster_3155	Pocillopora_meandrina_HIv1___Sc0000008	8324513	8324978	466	349	246	1.0	+	AUCAGCGAGCUCAGGAUGCCAU	5	158	95	32	26	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8326178-8326593	Cluster_3156	Pocillopora_meandrina_HIv1___Sc0000008	8326178	8326593	416	307	220	0.9869706840390879	+	AUCUAUGGUAACAUGACUGAAGACU	6	98	118	17	23	19	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8327199-8327616	Cluster_3157	Pocillopora_meandrina_HIv1___Sc0000008	8327199	8327616	418	271	185	1.0	+	GAUGGGACUUGUUAAAAGAGC	11	69	115	29	33	16	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8393840-8394263	Cluster_3158	Pocillopora_meandrina_HIv1___Sc0000008	8393840	8394263	424	205	131	1.0	+	AUAGGACCUUUGACUUAGAUAAGCA	27	47	110	14	6	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8428576-8428997	Cluster_3159	Pocillopora_meandrina_HIv1___Sc0000008	8428576	8428997	422	550	25	0.0	-	CGGCUUGAAAAAAAAAAAAA	117	362	0	90	47	50	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8460959-8461381	Cluster_3160	Pocillopora_meandrina_HIv1___Sc0000008	8460959	8461381	423	208	96	0.9903846153846154	+	UGACAAUGAUGACUUG	20	96	79	9	12	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8497463-8497917	Cluster_3161	Pocillopora_meandrina_HIv1___Sc0000008	8497463	8497917	455	427	82	0.9953161592505855	+	UUCCUUCAUCUGUUAAGUUAUU	88	46	79	14	119	47	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8601588-8602003	Cluster_3162	Pocillopora_meandrina_HIv1___Sc0000008	8601588	8602003	416	244	172	0.9836065573770492	+	UGAGGAGACUGUGUCCAC	7	106	61	28	19	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8602732-8603132	Cluster_3163	Pocillopora_meandrina_HIv1___Sc0000008	8602732	8603132	401	181	148	0.994475138121547	+	CAUCUGAAUGUGGUAAUGUGGAAUACUGU	3	71	48	12	14	19	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8604004-8604428	Cluster_3164	Pocillopora_meandrina_HIv1___Sc0000008	8604004	8604428	425	341	244	1.0	+	CUACUGCAAGAAGGGACU	7	146	94	20	41	17	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8635591-8636006	Cluster_3165	Pocillopora_meandrina_HIv1___Sc0000008	8635591	8636006	416	243	7	0.0	-	CCGGACUGUUACAGCA	230	243	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8801064-8801479	Cluster_3166	Pocillopora_meandrina_HIv1___Sc0000008	8801064	8801479	416	538	5	1.0	+	GAGACUUGAAGCGGUA	519	538	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8907187-8907932	Cluster_3167	Pocillopora_meandrina_HIv1___Sc0000008	8907187	8907932	746	1283	320	0.16134060795011693	-	UACCAUAGAACUUUCCAGAACAUUUCAUC	147	37	1045	15	16	125	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:8928124-8928539	Cluster_3168	Pocillopora_meandrina_HIv1___Sc0000008	8928124	8928539	416	787	21	0.9974587039390089	+	GUUGGGGCGGUGUUCA	352	785	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9150817-9151232	Cluster_3169	Pocillopora_meandrina_HIv1___Sc0000008	9150817	9151232	416	261	24	0.9923371647509579	+	GCUGGAUGAUGAGACC	228	248	3	3	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9290101-9290510	Cluster_3170	Pocillopora_meandrina_HIv1___Sc0000008	9290101	9290510	410	90	34	0.7	.	UGUCCACCCCCCACCGGCUGC	17	6	52	19	8	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9303645-9304059	Cluster_3171	Pocillopora_meandrina_HIv1___Sc0000008	9303645	9304059	415	162	22	0.9074074074074074	+	AGGAAACUCUGGUGA	115	151	7	2	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9314416-9314830	Cluster_3172	Pocillopora_meandrina_HIv1___Sc0000008	9314416	9314830	415	79	11	0.0	-	GGUGUGCUCUUAACUA	64	76	2	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9406621-9407048	Cluster_3173	Pocillopora_meandrina_HIv1___Sc0000008	9406621	9407048	428	226	94	0.9823008849557522	+	UCUGAAUUAUCCCGGGUCUCGGCAUUUUU	20	37	175	5	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9467065-9467478	Cluster_3174	Pocillopora_meandrina_HIv1___Sc0000008	9467065	9467478	414	301	230	0.009966777408637873	-	AGAAUUUGGGCGUGCUGAUGAA	9	109	108	17	30	18	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9469902-9470319	Cluster_3175	Pocillopora_meandrina_HIv1___Sc0000008	9469902	9470319	418	315	225	0.009523809523809525	-	GAGAUGUAGAAAAAUGCAAGGAGU	5	113	112	19	23	18	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9479573-9479980	Cluster_3176	Pocillopora_meandrina_HIv1___Sc0000008	9479573	9479980	408	131	78	0.007633587786259542	-	UACAUCUCUAGGUGCAGGACU	9	32	41	24	8	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9498200-9498707	Cluster_3177	Pocillopora_meandrina_HIv1___Sc0000008	9498200	9498707	508	1626	643	0.993849938499385	+	CGUGAGACCUAAGGGGCU	69	788	401	109	114	119	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9610951-9611366	Cluster_3178	Pocillopora_meandrina_HIv1___Sc0000008	9610951	9611366	416	109	5	1.0	+	GAAGUUCUGGUUUAAA	50	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9701478-9701891	Cluster_3179	Pocillopora_meandrina_HIv1___Sc0000008	9701478	9701891	414	110	59	0.00909090909090909	-	UGACGAUUUUCGCGGCUCGAUUUUGU	14	2	108	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9732062-9732478	Cluster_3180	Pocillopora_meandrina_HIv1___Sc0000008	9732062	9732478	417	310	53	0.9774193548387097	+	UGAACUAUGCCUGAAC	81	307	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9778406-9778836	Cluster_3181	Pocillopora_meandrina_HIv1___Sc0000008	9778406	9778836	431	350	91	0.02	-	AGUGCAAAUACUCGUGAAAGCUGAUCGCGGU	40	4	327	3	4	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9845969-9846513	Cluster_3182	Pocillopora_meandrina_HIv1___Sc0000008	9845969	9846513	545	1183	234	0.03888419273034658	-	UAACACAACUCGCUUCCGGUCACGACA	173	10	1139	7	2	8	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9851650-9852069	Cluster_3183	Pocillopora_meandrina_HIv1___Sc0000008	9851650	9852069	420	120	26	0.0	-	AUCUGUGGUUUUUUUAGGGG	70	107	0	5	8	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9981449-9982372	Cluster_3184	Pocillopora_meandrina_HIv1___Sc0000008	9981449	9982372	924	477	188	0.9287211740041929	+	UGAAGCAAUGAAACUCUGCAAGGACACU	32	33	414	2	11	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:9982628-9983087	Cluster_3185	Pocillopora_meandrina_HIv1___Sc0000008	9982628	9983087	460	735	219	0.4312925170068027	.	GAAGUCGAUAAGCGUUGGACUCAGAGU	63	20	672	8	4	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10004977-10005392	Cluster_3186	Pocillopora_meandrina_HIv1___Sc0000008	10004977	10005392	416	173	26	1.0	+	CAUGGGUUAGUCGAU	48	167	3	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10037456-10037882	Cluster_3187	Pocillopora_meandrina_HIv1___Sc0000008	10037456	10037882	427	167	53	0.7724550898203593	.	UAGUAUAACUUUGAUCUGAUGAAAAUC	90	1	158	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10038202-10038630	Cluster_3188	Pocillopora_meandrina_HIv1___Sc0000008	10038202	10038630	429	428	61	0.9906542056074766	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	295	0	422	0	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10175855-10176394	Cluster_3189	Pocillopora_meandrina_HIv1___Sc0000008	10175855	10176394	540	403	215	0.0024813895781637717	-	GUGGAACAGCAGAAACUUGAUA	27	99	140	24	56	67	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10220103-10220518	Cluster_3190	Pocillopora_meandrina_HIv1___Sc0000008	10220103	10220518	416	405	17	1.0	+	CGCGGGAUAGAGCAGC	183	405	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10274843-10275272	Cluster_3191	Pocillopora_meandrina_HIv1___Sc0000008	10274843	10275272	430	156	23	0.9807692307692307	+	UGAGUAAACCUUCUUUUAAAUUUGAACAUUU	64	2	154	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10367613-10368074	Cluster_3192	Pocillopora_meandrina_HIv1___Sc0000008	10367613	10368074	462	17047	775	0.9970082712500733	+	GGGGAUAUAGCUCAGUGGUAGAGCAUU	3701	2971	9096	949	2133	545	1353	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10463744-10464158	Cluster_3193	Pocillopora_meandrina_HIv1___Sc0000008	10463744	10464158	415	80	16	0.975	+	GUGGCAUUACUGUAGC	39	80	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10491245-10491671	Cluster_3194	Pocillopora_meandrina_HIv1___Sc0000008	10491245	10491671	427	172	76	0.05232558139534884	-	UGUUCUCGGUUAUCAGCUCAGAAAUGCG	15	0	167	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10492741-10493162	Cluster_3195	Pocillopora_meandrina_HIv1___Sc0000008	10492741	10493162	422	79	36	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	28	0	79	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10559700-10560127	Cluster_3196	Pocillopora_meandrina_HIv1___Sc0000008	10559700	10560127	428	196	77	0.015306122448979591	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	32	3	183	0	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10632661-10633081	Cluster_3197	Pocillopora_meandrina_HIv1___Sc0000008	10632661	10633081	421	397	22	0.9974811083123426	+	UCUGACGAAGGGCUGACACUA	328	39	0	349	7	2	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10670925-10671345	Cluster_3198	Pocillopora_meandrina_HIv1___Sc0000008	10670925	10671345	421	161	92	0.055900621118012424	-	UGAUCAGGACUUUCAGCAUGGAAUAGA	14	12	134	3	1	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10678356-10679047	Cluster_3199	Pocillopora_meandrina_HIv1___Sc0000008	10678356	10679047	692	2554	1173	0.9988253719655442	+	GCUGGACGAGAGAAGGA	64	1039	973	137	142	142	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10818437-10818850	Cluster_3200	Pocillopora_meandrina_HIv1___Sc0000008	10818437	10818850	414	85	28	0.011764705882352941	-	CUCUGUCUCUCUCCGUGU	10	72	4	7	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10871176-10871593	Cluster_3201	Pocillopora_meandrina_HIv1___Sc0000008	10871176	10871593	418	129	23	0.9922480620155039	+	AACUUUUGACAGUGGAUCA	33	129	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:10962997-10963437	Cluster_3202	Pocillopora_meandrina_HIv1___Sc0000008	10962997	10963437	441	341	72	0.2375366568914956	.	UAUUCACACGUGUUAUCUCGUCGCUCA	72	5	247	3	0	9	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11053603-11054013	Cluster_3203	Pocillopora_meandrina_HIv1___Sc0000008	11053603	11054013	411	97	47	1.0	+	UAGUGUAUACCUGACGGUUAUUUUUAAUC	17	3	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11058235-11058649	Cluster_3204	Pocillopora_meandrina_HIv1___Sc0000008	11058235	11058649	415	214	167	0.9953271028037384	+	GAUGGUGCCUUGAGGAACUCU	6	52	91	26	12	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11083066-11083481	Cluster_3205	Pocillopora_meandrina_HIv1___Sc0000008	11083066	11083481	416	266	37	0.9962406015037594	+	GGCCGUGGUCGAGGCA	109	264	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11124758-11125185	Cluster_3206	Pocillopora_meandrina_HIv1___Sc0000008	11124758	11125185	428	128	32	0.9921875	+	UGUAAACGGUCUUCUUCAAAUUUCUGGC	30	0	127	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11125511-11125938	Cluster_3207	Pocillopora_meandrina_HIv1___Sc0000008	11125511	11125938	428	140	57	0.9642857142857143	+	UGUGUGUAAGUCGAUUGAUAAUAUCUUC	27	2	124	0	0	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11127271-11127696	Cluster_3208	Pocillopora_meandrina_HIv1___Sc0000008	11127271	11127696	426	87	24	0.034482758620689655	-	GUUGACGUGAACGGUGUUAGAUGCCGAGC	32	0	84	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000008:11171418-11171956	Cluster_3209	Pocillopora_meandrina_HIv1___Sc0000008	11171418	11171956	539	909	185	0.9988998899889989	+	GUUUUUACCUUCUGGCUGACUGACAGUU	58	268	511	44	18	41	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:107419-107866	Cluster_3210	Pocillopora_meandrina_HIv1___Sc0000009	107419	107866	448	219	68	0.9726027397260274	+	UGGACUUUACAAUCUUGAACGAACGUUA	33	3	211	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:108027-108453	Cluster_3211	Pocillopora_meandrina_HIv1___Sc0000009	108027	108453	427	329	190	0.8571428571428571	+	UGAUUCCGCGCUUAUGACUCGUCCCAU	15	3	294	2	3	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:108788-111195	Cluster_3212	Pocillopora_meandrina_HIv1___Sc0000009	108788	111195	2408	4218	1350	0.9307728781412992	+	UGUACAACCAUCCGAUACUCUUGU	657	41	2986	10	27	86	1068	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:111398-112649	Cluster_3213	Pocillopora_meandrina_HIv1___Sc0000009	111398	112649	1252	1653	683	0.8058076225045372	+	CUUUCCGAGGUCGCGA	93	184	1374	9	21	11	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:112800-113227	Cluster_3214	Pocillopora_meandrina_HIv1___Sc0000009	112800	113227	428	558	254	0.7956989247311828	.	UCCGAGAGCUUUGUUCACAUAGGCCAUU	68	58	434	12	10	10	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:113509-114675	Cluster_3215	Pocillopora_meandrina_HIv1___Sc0000009	113509	114675	1167	1412	588	0.8711048158640227	+	UACAAUAACCUCUGAUUUCACUAAAUG	60	12	1286	9	14	22	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:116221-116648	Cluster_3216	Pocillopora_meandrina_HIv1___Sc0000009	116221	116648	428	284	111	0.13028169014084506	-	AGUAGUUUCACUCUUUGGGCAAAAUAUU	67	28	245	5	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:140077-140504	Cluster_3217	Pocillopora_meandrina_HIv1___Sc0000009	140077	140504	428	159	41	0.025157232704402517	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	74	3	153	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:140964-141380	Cluster_3218	Pocillopora_meandrina_HIv1___Sc0000009	140964	141380	417	196	121	0.00510204081632653	-	AAUGAAAUGUUUAAACGAAAAUAGUAGAAU	11	0	186	3	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:143286-143715	Cluster_3219	Pocillopora_meandrina_HIv1___Sc0000009	143286	143715	430	915	81	0.0	-	UGCAGUGGUUUUCUGGAUCCUGAUUGGGG	187	16	891	6	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:171845-172273	Cluster_3220	Pocillopora_meandrina_HIv1___Sc0000009	171845	172273	429	175	67	0.022857142857142857	-	UGGUAGUGGUUUUUUGGAUCCUGAUUGGU	16	10	154	1	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:201573-202002	Cluster_3221	Pocillopora_meandrina_HIv1___Sc0000009	201573	202002	430	863	134	0.011587485515643106	-	UUCGAUCCUAAAUUCUCUCCAUGCUUCUG	232	15	743	15	13	52	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:239916-241737	Cluster_3222	Pocillopora_meandrina_HIv1___Sc0000009	239916	241737	1822	26445	3064	0.9338627339761769	+	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2270	233	25059	84	139	343	587	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:282982-283409	Cluster_3223	Pocillopora_meandrina_HIv1___Sc0000009	282982	283409	428	175	52	0.017142857142857144	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	67	4	163	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:286345-286775	Cluster_3224	Pocillopora_meandrina_HIv1___Sc0000009	286345	286775	431	498	116	0.002008032128514056	-	GGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	64	9	478	3	3	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:331520-331944	Cluster_3225	Pocillopora_meandrina_HIv1___Sc0000009	331520	331944	425	194	95	0.5721649484536082	.	AACUACUUGAACUGGUUCGCCUUAAUGA	16	25	134	21	6	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:363140-363673	Cluster_3226	Pocillopora_meandrina_HIv1___Sc0000009	363140	363673	534	3595	245	0.6917941585535466	.	UUACUUAAAUGUUAUUGGUUUGU	749	59	1065	22	1140	1217	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:366415-366844	Cluster_3227	Pocillopora_meandrina_HIv1___Sc0000009	366415	366844	430	949	84	0.0	-	UGCAGUGGUUUUCUGGAUCCUGAUUGGUG	204	16	927	5	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:424369-424783	Cluster_3228	Pocillopora_meandrina_HIv1___Sc0000009	424369	424783	415	123	12	0.016260162601626018	-	CGACCGUGGUGGACA	111	119	1	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:447553-447981	Cluster_3229	Pocillopora_meandrina_HIv1___Sc0000009	447553	447981	429	236	36	0.00423728813559322	-	UAGGACAACUGAGAAUCCACGUAGACUC	90	0	232	0	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:478711-479133	Cluster_3230	Pocillopora_meandrina_HIv1___Sc0000009	478711	479133	423	344	230	0.28488372093023256	.	CAUCACAUCGUCCACUCUGGCC	11	119	110	27	32	25	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:479265-479689	Cluster_3231	Pocillopora_meandrina_HIv1___Sc0000009	479265	479689	425	253	126	0.003952569169960474	-	CACGUCACUGUCAAAAAA	37	95	95	16	9	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:480273-481320	Cluster_3232	Pocillopora_meandrina_HIv1___Sc0000009	480273	481320	1048	2016	650	0.001984126984126984	-	GCAGUAUGAUGAAAGAUUAUGA	152	615	839	111	239	100	112	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:492424-492836	Cluster_3233	Pocillopora_meandrina_HIv1___Sc0000009	492424	492836	413	89	26	0.10112359550561797	-	CGCUACUUUGACCUCAUG	29	84	2	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:504251-504671	Cluster_3234	Pocillopora_meandrina_HIv1___Sc0000009	504251	504671	421	345	32	0.034782608695652174	-	CACUUCCUGGAGUUAAGGCU	125	219	2	119	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:539163-539614	Cluster_3235	Pocillopora_meandrina_HIv1___Sc0000009	539163	539614	452	443	220	0.033860045146726865	-	UGCGGCAUGACCUUUGAAAGGCA	21	106	146	29	62	68	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:554654-555065	Cluster_3236	Pocillopora_meandrina_HIv1___Sc0000009	554654	555065	412	127	67	0.5984251968503937	.	UUAACUCUACGGCGUCAACGACUUUCUU	10	10	91	5	2	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:691219-691863	Cluster_3237	Pocillopora_meandrina_HIv1___Sc0000009	691219	691863	645	933	502	0.0021436227224008574	-	AAUCUUUCGCAGCAUUUUAGACU	35	280	290	55	94	141	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:692539-692943	Cluster_3238	Pocillopora_meandrina_HIv1___Sc0000009	692539	692943	405	128	55	0.0234375	-	UGAACACAUGUGCAUUCAAGAUCUUUCUGU	15	5	120	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:698405-698814	Cluster_3239	Pocillopora_meandrina_HIv1___Sc0000009	698405	698814	410	100	66	0.03	-	AGAUGGAAAAAAUUGUGAUCUUUGCA	11	19	57	3	8	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:700978-701398	Cluster_3240	Pocillopora_meandrina_HIv1___Sc0000009	700978	701398	421	173	116	0.0	-	AGGCGUUGGUGCAGGA	6	72	41	21	13	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:710225-710637	Cluster_3241	Pocillopora_meandrina_HIv1___Sc0000009	710225	710637	413	112	40	0.6428571428571429	.	UGGAAAGAAAACACUGGAAAAUUGAUGAUA	18	3	104	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:748276-748690	Cluster_3242	Pocillopora_meandrina_HIv1___Sc0000009	748276	748690	415	82	6	0.0	-	CCCUGCUAGAACCUCU	65	82	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1103767-1104213	Cluster_3243	Pocillopora_meandrina_HIv1___Sc0000009	1103767	1104213	447	2536	275	0.9522870662460567	+	UGAGACAGUACACACGAUUUGAUAU	593	23	2474	3	5	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1104285-1104715	Cluster_3244	Pocillopora_meandrina_HIv1___Sc0000009	1104285	1104715	431	7241	255	0.9899185195414998	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	2115	26	6966	109	21	9	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1144903-1145321	Cluster_3245	Pocillopora_meandrina_HIv1___Sc0000009	1144903	1145321	419	83	23	0.012048192771084338	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	22	0	82	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1362205-1363086	Cluster_3246	Pocillopora_meandrina_HIv1___Sc0000009	1362205	1363086	882	1273	358	0.8900235663786331	+	UGAAAUCGUCUAAACGAGAUAACAUCUGCUU	138	15	1179	25	5	11	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1446195-1446622	Cluster_3247	Pocillopora_meandrina_HIv1___Sc0000009	1446195	1446622	428	190	79	0.9947368421052631	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	8	174	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1449346-1450166	Cluster_3248	Pocillopora_meandrina_HIv1___Sc0000009	1449346	1450166	821	409	107	0.980440097799511	+	UAGGACAACUGAGAAUCCACGUAGACUC	118	2	396	1	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1753899-1754316	Cluster_3249	Pocillopora_meandrina_HIv1___Sc0000009	1753899	1754316	418	423	23	0.9929078014184397	+	CGGCCUGAAAAAAAAAAA	180	421	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:1843950-1844472	Cluster_3250	Pocillopora_meandrina_HIv1___Sc0000009	1843950	1844472	523	883	262	0.8901472253680635	+	UGCUGAAAAUCUGGACUUCUCGUAGAGC	104	14	827	2	1	26	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2086389-2087156	Cluster_3251	Pocillopora_meandrina_HIv1___Sc0000009	2086389	2087156	768	803	225	0.9950186799501868	+	UGAAAGAGAGCGUGCUGUCAAUAUUUAGAC	111	6	783	2	1	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2594612-2595026	Cluster_3252	Pocillopora_meandrina_HIv1___Sc0000009	2594612	2595026	415	903	10	0.9988925802879292	+	CCGCGACUGCUGCCA	886	902	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2662023-2662460	Cluster_3253	Pocillopora_meandrina_HIv1___Sc0000009	2662023	2662460	438	373	121	0.024128686327077747	-	UCUAGACAAAUAACUCUGAUAUUUA	56	10	340	0	2	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:2663671-2664213	Cluster_3254	Pocillopora_meandrina_HIv1___Sc0000009	2663671	2664213	543	358	108	0.4888268156424581	.	CUGGAGUGAAGAAAGAUUUGACCUUA	48	5	334	2	2	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3334049-3334469	Cluster_3255	Pocillopora_meandrina_HIv1___Sc0000009	3334049	3334469	421	125	47	0.264	.	AUUUGUGCUAGAAAGAAUCCGCC	18	1	87	0	1	32	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3388787-3389212	Cluster_3256	Pocillopora_meandrina_HIv1___Sc0000009	3388787	3389212	426	107	31	0.009345794392523364	-	UGUGUAGAUAUGUCUUUUGGACAGGA	28	0	107	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3732208-3732902	Cluster_3257	Pocillopora_meandrina_HIv1___Sc0000009	3732208	3732902	695	796	350	0.06281407035175879	-	UGACCGUAUUUCUUCAUCCAAUGGCUGAAC	43	18	743	5	5	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3894902-3894992	Cluster_3258	Pocillopora_meandrina_HIv1___Sc0000009	3894902	3894992	91	647	58	0.0015455950540958269	-	UAGCAUAACAUUGUAAGAGAUC	322	74	7	6	504	54	2	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000009:3944407-3945806	Cluster_3259	Pocillopora_meandrina_HIv1___Sc0000009	3944407	3945806	1400	7579	1190	0.08272859216255443	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	1542	78	7104	26	22	104	245	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3945827-3947085	Cluster_3260	Pocillopora_meandrina_HIv1___Sc0000009	3945827	3947085	1259	1807	567	0.2302158273381295	.	UAACUCCGAUCCGAUGACCUAGAAAGUC	144	17	1668	4	27	31	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:3947477-3948158	Cluster_3261	Pocillopora_meandrina_HIv1___Sc0000009	3947477	3948158	682	296	157	0.11148648648648649	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	28	1	270	8	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4074794-4075209	Cluster_3262	Pocillopora_meandrina_HIv1___Sc0000009	4074794	4075209	416	169	32	1.0	+	GAGGCUUGAAGCGGUU	52	169	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4102972-4103398	Cluster_3263	Pocillopora_meandrina_HIv1___Sc0000009	4102972	4103398	427	197	21	1.0	+	AAGAGAACUAAGAAAAAAAAAAAAAA	55	1	182	0	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4224260-4224677	Cluster_3264	Pocillopora_meandrina_HIv1___Sc0000009	4224260	4224677	418	3977	55	0.0005028916268544129	-	CGGACCUCAGAUCAG	1681	3977	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4278823-4279251	Cluster_3265	Pocillopora_meandrina_HIv1___Sc0000009	4278823	4279251	429	78	9	0.0	-	UAAGAAAUCUUCCACUGAUCGUUGAGUUC	68	0	78	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4289522-4290159	Cluster_3266	Pocillopora_meandrina_HIv1___Sc0000009	4289522	4290159	638	628	193	0.08439490445859872	-	UGCUAACAUCGUCCUCUAUCUUGCAGGU	30	18	545	8	9	9	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4517540-4518080	Cluster_3267	Pocillopora_meandrina_HIv1___Sc0000009	4517540	4518080	541	577	147	0.7660311958405546	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	192	4	548	2	1	5	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4557501-4557926	Cluster_3268	Pocillopora_meandrina_HIv1___Sc0000009	4557501	4557926	426	91	40	0.0	-	UGACGUCCAAACGAGCCUGAUCUUGAUG	11	2	89	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4558097-4558525	Cluster_3269	Pocillopora_meandrina_HIv1___Sc0000009	4558097	4558525	429	2739	92	0.0	-	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1662	0	2735	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4559322-4559742	Cluster_3270	Pocillopora_meandrina_HIv1___Sc0000009	4559322	4559742	421	93	35	0.010752688172043012	-	UUUUACGCAUGGGCUUUGAUGGUAUAUCA	14	2	69	1	2	17	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4630961-4631375	Cluster_3271	Pocillopora_meandrina_HIv1___Sc0000009	4630961	4631375	415	109	46	0.9908256880733946	+	GAGUAUGCUCUUAACC	22	87	11	3	7	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4677172-4677588	Cluster_3272	Pocillopora_meandrina_HIv1___Sc0000009	4677172	4677588	417	88	28	0.8636363636363636	+	UGGCCUGAAAAAAAAAAAA	19	47	3	13	5	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4705225-4705659	Cluster_3273	Pocillopora_meandrina_HIv1___Sc0000009	4705225	4705659	435	667	173	0.9250374812593704	+	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	39	20	585	5	9	6	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4744138-4744895	Cluster_3274	Pocillopora_meandrina_HIv1___Sc0000009	4744138	4744895	758	951	340	0.9400630914826499	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	74	3	924	2	5	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4745617-4746028	Cluster_3275	Pocillopora_meandrina_HIv1___Sc0000009	4745617	4746028	412	136	78	0.8676470588235294	+	UCCGCUACGUUUUGCUCUCCUGGGACGUGU	13	3	122	2	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4746610-4747511	Cluster_3276	Pocillopora_meandrina_HIv1___Sc0000009	4746610	4747511	902	927	317	0.9083063646170443	+	UGAGACUUGUUGUUGGGUAACUGACGUG	133	10	867	4	4	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4747548-4749567	Cluster_3277	Pocillopora_meandrina_HIv1___Sc0000009	4747548	4749567	2020	6358	1662	0.7997798049701164	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	454	217	5658	25	45	169	244	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4759035-4759464	Cluster_3278	Pocillopora_meandrina_HIv1___Sc0000009	4759035	4759464	430	180	48	0.016666666666666666	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	67	5	174	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4760218-4760814	Cluster_3279	Pocillopora_meandrina_HIv1___Sc0000009	4760218	4760814	597	5404	481	0.0038860103626943004	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	822	20	5330	4	8	12	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4775411-4776044	Cluster_3280	Pocillopora_meandrina_HIv1___Sc0000009	4775411	4776044	634	671	229	0.06706408345752608	-	UGUAGAAUCAAUCUGUUACUAAGACACC	95	6	630	10	7	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4800394-4800797	Cluster_3281	Pocillopora_meandrina_HIv1___Sc0000009	4800394	4800797	404	143	86	0.13286713286713286	-	UGUUGUCCUUUGUUCAGUCUGAUUAACC	10	4	135	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4801046-4801960	Cluster_3282	Pocillopora_meandrina_HIv1___Sc0000009	4801046	4801960	915	914	330	0.060175054704595186	-	UGAUGUCUUCGACUGCAGAUCUGGCAGC	49	7	837	4	5	19	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4874854-4875270	Cluster_3283	Pocillopora_meandrina_HIv1___Sc0000009	4874854	4875270	417	156	6	1.0	+	CUUGUGAAUAGGCGGGU	123	156	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4930947-4931370	Cluster_3284	Pocillopora_meandrina_HIv1___Sc0000009	4930947	4931370	424	127	37	0.007874015748031496	-	CGAUUGUAGCUCUGAUUUCCAU	14	15	66	5	19	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4943767-4944198	Cluster_3285	Pocillopora_meandrina_HIv1___Sc0000009	4943767	4944198	432	11306	236	0.0006191402794976119	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	3959	5	11295	3	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4948006-4948435	Cluster_3286	Pocillopora_meandrina_HIv1___Sc0000009	4948006	4948435	430	8185	210	0.001710445937690898	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	5117	21	8074	13	10	9	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4983713-4984141	Cluster_3287	Pocillopora_meandrina_HIv1___Sc0000009	4983713	4984141	429	266	140	0.06766917293233082	-	GCAGCACCUGUACUAUGCCAGCCAUCCUA	29	35	201	3	10	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:4986241-4986667	Cluster_3288	Pocillopora_meandrina_HIv1___Sc0000009	4986241	4986667	427	172	93	0.029069767441860465	-	UGUGCUGCAAUUAACUGAGUUGGAGGAAC	31	23	122	5	6	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5001484-5001912	Cluster_3289	Pocillopora_meandrina_HIv1___Sc0000009	5001484	5001912	429	335	88	0.008955223880597015	-	UUUAGAAGCAUUGUCUGCUGGUCUUCCCA	86	17	298	5	2	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5019555-5020110	Cluster_3290	Pocillopora_meandrina_HIv1___Sc0000009	5019555	5020110	556	607	275	0.9110378912685337	+	UACUCUGUUGGAUGCUCGUAUAUUAUUCAGC	44	14	558	2	4	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5020198-5020606	Cluster_3291	Pocillopora_meandrina_HIv1___Sc0000009	5020198	5020606	409	100	45	0.97	+	UGGAAAUUCUGUCGGCUUCAGUGCCAC	21	1	97	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5039382-5039812	Cluster_3292	Pocillopora_meandrina_HIv1___Sc0000009	5039382	5039812	431	3362	254	0.000594883997620464	-	CUUAGAAGCGUUGUCUGCUGGUCUUCCCA	869	49	3269	5	10	9	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5051287-5051715	Cluster_3293	Pocillopora_meandrina_HIv1___Sc0000009	5051287	5051715	429	284	63	0.06690140845070422	-	CCGUAUUUGAUUGCCGUUUGUUCUCUGC	80	16	257	1	4	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5065799-5066228	Cluster_3294	Pocillopora_meandrina_HIv1___Sc0000009	5065799	5066228	430	3050	156	0.0003278688524590164	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	1276	35	2513	9	46	234	213	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5076933-5077372	Cluster_3295	Pocillopora_meandrina_HIv1___Sc0000009	5076933	5077372	440	6925	353	0.0077978339350180505	-	CGGUACUGGAAUUAACUGAGUUGGACG	1777	88	6598	26	77	61	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5151780-5152209	Cluster_3296	Pocillopora_meandrina_HIv1___Sc0000009	5151780	5152209	430	533	48	0.0	-	AAGAAUGUGAUAGCCGAUAAAGAAACUACU	315	3	515	1	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5154880-5155308	Cluster_3297	Pocillopora_meandrina_HIv1___Sc0000009	5154880	5155308	429	237	67	0.0	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	59	2	225	1	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5167006-5167481	Cluster_3298	Pocillopora_meandrina_HIv1___Sc0000009	5167006	5167481	476	494	76	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	248	6	473	6	5	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5167505-5167931	Cluster_3299	Pocillopora_meandrina_HIv1___Sc0000009	5167505	5167931	427	91	21	0.9340659340659341	+	ACAACAACAAGGUCCUGUUAUGAAAAUG	42	2	82	3	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5195132-5195564	Cluster_3300	Pocillopora_meandrina_HIv1___Sc0000009	5195132	5195564	433	34856	479	5.737893045673629e-05	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	14358	51	34718	18	21	19	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5199379-5199854	Cluster_3301	Pocillopora_meandrina_HIv1___Sc0000009	5199379	5199854	476	525	59	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	266	3	514	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5249163-5249610	Cluster_3302	Pocillopora_meandrina_HIv1___Sc0000009	5249163	5249610	448	262	132	0.10687022900763359	-	GCAGCACCUGUACUAUGCCAGCCAUCCUAUC	18	73	159	5	9	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5252243-5252692	Cluster_3303	Pocillopora_meandrina_HIv1___Sc0000009	5252243	5252692	450	31717	617	0.0057382476274553075	-	CGGUGCAGGAAUUAACUGAGUUGGACG	9313	1198	26669	1254	876	746	974	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5312552-5312992	Cluster_3304	Pocillopora_meandrina_HIv1___Sc0000009	5312552	5312992	441	14317	462	0.0002095411049800936	-	AGUGCUAGAAUUAACUGAGUUGGACGAACU	2317	236	13700	133	116	80	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5350474-5350892	Cluster_3305	Pocillopora_meandrina_HIv1___Sc0000009	5350474	5350892	419	20155	122	0.0004465393202679236	-	AACUUUUGACGGUGGA	13944	20154	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5381072-5381529	Cluster_3306	Pocillopora_meandrina_HIv1___Sc0000009	5381072	5381529	458	18306	681	0.015131650824866165	-	CGGUGCUGAAAUUAACUGAGUUGGAGA	3669	754	12900	275	448	753	3176	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5385815-5386269	Cluster_3307	Pocillopora_meandrina_HIv1___Sc0000009	5385815	5386269	455	1690	159	0.002366863905325444	-	CUCAAGCCGAGCAGACUGCCUACAAUCU	324	62	1588	16	4	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5426651-5427080	Cluster_3308	Pocillopora_meandrina_HIv1___Sc0000009	5426651	5427080	430	526	204	0.024714828897338403	-	ACAGCACCUGUACUAUGCCAGCCAUCCCAU	58	73	378	23	27	18	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5429088-5429525	Cluster_3309	Pocillopora_meandrina_HIv1___Sc0000009	5429088	5429525	438	1626	145	0.0	-	GGUGCAGGAAUUAACUGAGUUGGACGAACU	471	4	1607	1	5	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5461464-5461895	Cluster_3310	Pocillopora_meandrina_HIv1___Sc0000009	5461464	5461895	432	3907	303	0.004607115433836704	-	AGUGCAGGAAUUAACUGAGUUGGACAAACU	905	118	3651	43	28	26	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5465757-5466184	Cluster_3311	Pocillopora_meandrina_HIv1___Sc0000009	5465757	5466184	428	84	26	0.0	-	GAAUUAAGGAGUGUCCACUUGAGCAGAGA	44	4	78	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5521032-5521460	Cluster_3312	Pocillopora_meandrina_HIv1___Sc0000009	5521032	5521460	429	161	56	0.0	-	CUUAGAAGCAUUGUCUGCUGGUCUUCCCA	36	6	148	2	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5531819-5532250	Cluster_3313	Pocillopora_meandrina_HIv1___Sc0000009	5531819	5532250	432	29362	367	0.00020434575301409987	-	UGUGCUAGAAUUAACUGAGUUGGAGAAACU	11718	234	26816	115	58	2038	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5573592-5574021	Cluster_3314	Pocillopora_meandrina_HIv1___Sc0000009	5573592	5574021	430	6791	147	0.00427035782653512	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	4358	49	6668	10	6	10	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5616752-5617179	Cluster_3315	Pocillopora_meandrina_HIv1___Sc0000009	5616752	5617179	428	209	71	0.09569377990430622	-	GCAGCACCUGUACUAUGCCAGUCAUCCCAU	23	79	123	0	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5619718-5620348	Cluster_3316	Pocillopora_meandrina_HIv1___Sc0000009	5619718	5620348	631	16874	440	0.008652364584567975	-	GGUGCAGGAAUUAACUGAGUUGGACGAACU	4589	331	15923	149	184	101	186	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5624158-5624633	Cluster_3317	Pocillopora_meandrina_HIv1___Sc0000009	5624158	5624633	476	2183	130	0.0004580852038479157	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	1309	12	2130	3	3	6	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5631674-5632098	Cluster_3318	Pocillopora_meandrina_HIv1___Sc0000009	5631674	5632098	425	1255	215	0.9976095617529881	+	AACGAGACCUUGACCU	89	959	111	38	59	45	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5651649-5652072	Cluster_3319	Pocillopora_meandrina_HIv1___Sc0000009	5651649	5652072	424	97	36	0.010309278350515464	-	UACUCCGACACUCCGAUAUGUGAUACUAC	42	1	90	2	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5684055-5684484	Cluster_3320	Pocillopora_meandrina_HIv1___Sc0000009	5684055	5684484	430	382	127	0.002617801047120419	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	89	13	355	3	4	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5689078-5689507	Cluster_3321	Pocillopora_meandrina_HIv1___Sc0000009	5689078	5689507	430	315	140	0.1619047619047619	-	GCAGCACCUGUACUAUGCCAGCCAUCCUA	31	46	233	10	9	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5691732-5692171	Cluster_3322	Pocillopora_meandrina_HIv1___Sc0000009	5691732	5692171	440	3119	249	0.0596344982366143	-	GGUGCUGGAAUUAACUGAGUUGGAAGAAC	775	395	2207	83	90	56	288	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5696195-5696623	Cluster_3323	Pocillopora_meandrina_HIv1___Sc0000009	5696195	5696623	429	108	18	0.0	-	CUGUAUUUGGAUUUUCGUUUGUUCACUGC	70	1	105	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5749814-5750260	Cluster_3324	Pocillopora_meandrina_HIv1___Sc0000009	5749814	5750260	447	432	154	0.23842592592592593	.	GCAGCACCUGUACUAUGCCAGCCAUCCUA	55	74	335	4	4	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5753007-5753436	Cluster_3325	Pocillopora_meandrina_HIv1___Sc0000009	5753007	5753436	430	451	80	0.0066518847006651885	-	UGUGCUAGAAUUAACUGAGUUGGAGAAAUU	179	11	352	7	11	52	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5808018-5808447	Cluster_3326	Pocillopora_meandrina_HIv1___Sc0000009	5808018	5808447	430	372	67	0.010752688172043012	-	AAGAAUGCGAUAGCCGAUAAAGAAACUACU	179	7	352	1	1	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5818362-5818790	Cluster_3327	Pocillopora_meandrina_HIv1___Sc0000009	5818362	5818790	429	634	135	0.006309148264984227	-	GGUGCUGGAAUUAACUGAGUUGC	198	62	209	14	18	240	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5821920-5822374	Cluster_3328	Pocillopora_meandrina_HIv1___Sc0000009	5821920	5822374	455	223	73	0.9955156950672646	+	UGAACACGCGUACUUGUAAUUAUGAAAUGGA	21	1	218	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5822529-5822956	Cluster_3329	Pocillopora_meandrina_HIv1___Sc0000009	5822529	5822956	428	374	204	0.8609625668449198	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	26	3	327	2	6	17	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5823290-5827409	Cluster_3330	Pocillopora_meandrina_HIv1___Sc0000009	5823290	5827409	4120	7311	2499	0.8926275475311175	+	UGUACAACCAUCCGAUACUCUUGU	695	261	5609	27	52	129	1233	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5828075-5829181	Cluster_3331	Pocillopora_meandrina_HIv1___Sc0000009	5828075	5829181	1107	1297	543	0.8673862760215882	+	UACAAUAACCUCUGAUUUCACUAAAUG	70	12	1208	6	8	16	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5846449-5846895	Cluster_3332	Pocillopora_meandrina_HIv1___Sc0000009	5846449	5846895	447	674	151	0.09495548961424333	-	AAGAAUGUGAUAGCCAAUAAAGAAAGUACU	142	26	581	9	0	13	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5849549-5849977	Cluster_3333	Pocillopora_meandrina_HIv1___Sc0000009	5849549	5849977	429	417	133	0.0	-	AUUAGAAGCGUUGUCUGCUGGUCUUCCCA	68	5	399	0	3	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5856893-5857324	Cluster_3334	Pocillopora_meandrina_HIv1___Sc0000009	5856893	5857324	432	16508	313	0.0004240368306275745	-	GGUGCAGGAAUUAACUGAGUUGGACAAACU	7036	16	16467	4	3	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5959840-5960535	Cluster_3335	Pocillopora_meandrina_HIv1___Sc0000009	5959840	5960535	696	1605	231	0.9950155763239875	+	UCCAAUCCCCACCGAGAAAGUAUUCAAUAUU	510	7	1577	4	1	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:5961241-5961669	Cluster_3336	Pocillopora_meandrina_HIv1___Sc0000009	5961241	5961669	429	309	105	1.0	+	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	58	5	294	0	5	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6055347-6055763	Cluster_3337	Pocillopora_meandrina_HIv1___Sc0000009	6055347	6055763	417	255	29	1.0	+	AACGGCCGUGGAUUGGC	128	253	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6213675-6214133	Cluster_3338	Pocillopora_meandrina_HIv1___Sc0000009	6213675	6214133	459	2548	299	0.934850863422292	+	UGAGACAGUACACACGAUUUGAUAU	529	7	2490	3	4	24	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6222493-6223185	Cluster_3339	Pocillopora_meandrina_HIv1___Sc0000009	6222493	6223185	693	445	199	0.011235955056179775	-	UCUUCAUGAUUUCUUCUACUUUGAAUGUGGC	34	8	428	2	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6235925-6236333	Cluster_3340	Pocillopora_meandrina_HIv1___Sc0000009	6235925	6236333	409	122	70	0.6639344262295082	.	UCCCCUAAGGGAGGCUGUGAACUAAUUUUU	9	38	55	19	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6242821-6243422	Cluster_3341	Pocillopora_meandrina_HIv1___Sc0000009	6242821	6243422	602	2996	315	0.9365821094793058	+	UGAAUACACAUUACCAGUGAACUUGACUAC	589	16	2851	14	6	26	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6244745-6246358	Cluster_3342	Pocillopora_meandrina_HIv1___Sc0000009	6244745	6246358	1614	1161	333	0.48320413436692505	.	GAAGAAAAUAUUAAAGGAAAAAGGAAUGAC	90	22	1082	3	15	18	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6247112-6247722	Cluster_3343	Pocillopora_meandrina_HIv1___Sc0000009	6247112	6247722	611	803	313	0.3835616438356164	.	AAAGAGCUGAAAAAAAGAAUGUUUC	125	50	676	15	9	21	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6368612-6369361	Cluster_3344	Pocillopora_meandrina_HIv1___Sc0000009	6368612	6369361	750	843	254	0.9798339264531435	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	82	1	826	3	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6369644-6370321	Cluster_3345	Pocillopora_meandrina_HIv1___Sc0000009	6369644	6370321	678	611	314	0.867430441898527	+	UGUGAGAAAAGGAUUGAUCUGUUUUGC	38	13	554	4	2	6	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6370342-6370966	Cluster_3346	Pocillopora_meandrina_HIv1___Sc0000009	6370342	6370966	625	987	398	0.9594731509625126	+	UCUGUACAGGAAUUAUACGAAUAAUGGC	34	8	939	4	4	7	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6411493-6411909	Cluster_3347	Pocillopora_meandrina_HIv1___Sc0000009	6411493	6411909	417	171	6	0.005847953216374269	-	UAGAAUGUUUACUCGUA	147	171	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6435613-6436040	Cluster_3348	Pocillopora_meandrina_HIv1___Sc0000009	6435613	6436040	428	95	7	0.9894736842105263	+	UACCAAGGUCUUGUAGUCUAGUACAACU	61	0	94	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6437273-6437950	Cluster_3349	Pocillopora_meandrina_HIv1___Sc0000009	6437273	6437950	678	1085	381	0.2820276497695853	.	ACGACACCAACGAACAAGACAUCAUCUGUGG	82	21	954	10	12	19	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6543007-6543435	Cluster_3350	Pocillopora_meandrina_HIv1___Sc0000009	6543007	6543435	429	538	46	0.0	-	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	393	1	534	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6598009-6598600	Cluster_3351	Pocillopora_meandrina_HIv1___Sc0000009	6598009	6598600	592	3051	377	0.9931170108161259	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	502	18	2954	2	1	58	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6642825-6643238	Cluster_3352	Pocillopora_meandrina_HIv1___Sc0000009	6642825	6643238	414	73	10	0.0	-	UCCGCUACUUUGACCA	53	73	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:6907816-6908244	Cluster_3353	Pocillopora_meandrina_HIv1___Sc0000009	6907816	6908244	429	487	48	0.0	-	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	349	0	480	0	1	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7022715-7023189	Cluster_3354	Pocillopora_meandrina_HIv1___Sc0000009	7022715	7023189	475	2738	250	0.9952520087655223	+	GCCUCCGUAGCUCAGG	1066	2547	97	41	29	18	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7089518-7089940	Cluster_3355	Pocillopora_meandrina_HIv1___Sc0000009	7089518	7089940	423	134	35	0.373134328358209	.	GUUGUUACAACUGAGGCCGAGGU	38	7	48	2	1	52	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7142342-7143043	Cluster_3356	Pocillopora_meandrina_HIv1___Sc0000009	7142342	7143043	702	282	146	0.9290780141843972	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	31	7	266	3	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7144273-7144701	Cluster_3357	Pocillopora_meandrina_HIv1___Sc0000009	7144273	7144701	429	273	152	0.8608058608058609	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	31	3	251	2	1	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7160758-7161573	Cluster_3358	Pocillopora_meandrina_HIv1___Sc0000009	7160758	7161573	816	444	144	0.9954954954954955	+	GAAGACAAAAGAGGUUGGAACACGUUACA	58	51	368	4	11	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7178014-7178443	Cluster_3359	Pocillopora_meandrina_HIv1___Sc0000009	7178014	7178443	430	187	53	0.0	-	UCACUCGUAAGUGGUCGCUCGUAAAUACGU	75	3	178	0	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7206122-7206537	Cluster_3360	Pocillopora_meandrina_HIv1___Sc0000009	7206122	7206537	416	173	102	0.3583815028901734	.	CGCGUGAUUACUUUGACUUC	9	103	0	49	12	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7233761-7234185	Cluster_3361	Pocillopora_meandrina_HIv1___Sc0000009	7233761	7234185	425	216	107	0.37962962962962965	.	UGAAACCCUUGAUCUUCCAGAACGGCUUGA	15	0	185	12	5	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7236606-7237027	Cluster_3362	Pocillopora_meandrina_HIv1___Sc0000009	7236606	7237027	422	175	86	0.5142857142857142	.	CUUUGAAGAAGACUGCGCAAGAUAACGAGC	23	8	152	2	3	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7249231-7249657	Cluster_3363	Pocillopora_meandrina_HIv1___Sc0000009	7249231	7249657	427	260	57	1.0	+	UCUGGAAGCGUUAUCUGCUGGUCUGCC	84	8	236	1	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7263451-7263879	Cluster_3364	Pocillopora_meandrina_HIv1___Sc0000009	7263451	7263879	429	455	54	0.9978021978021978	+	GAAGACAACAGAGGAUGGAACACAUUACA	193	41	402	4	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7278506-7278933	Cluster_3365	Pocillopora_meandrina_HIv1___Sc0000009	7278506	7278933	428	273	60	1.0	+	UCUGGAAGCGUUAUCUGCUGGUCUGCC	76	3	252	1	0	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7288102-7288531	Cluster_3366	Pocillopora_meandrina_HIv1___Sc0000009	7288102	7288531	430	353	60	1.0	+	CGGACAUUGAGUCAAAAACAGCUGAUGGU	69	6	341	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7291675-7292101	Cluster_3367	Pocillopora_meandrina_HIv1___Sc0000009	7291675	7292101	427	125	24	0.0	-	GAUGGAAUGUGCUGCACAGGAUAGUGAUU	63	19	92	2	9	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7302743-7303172	Cluster_3368	Pocillopora_meandrina_HIv1___Sc0000009	7302743	7303172	430	216	53	0.9953703703703703	+	UGGAUUAUCAACGUUUAACAGGGAACUUGUU	29	11	200	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7306880-7307308	Cluster_3369	Pocillopora_meandrina_HIv1___Sc0000009	7306880	7307308	429	194	49	0.5103092783505154	.	AACACACGGAAGAAUCAGU	44	64	123	1	2	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7320318-7320738	Cluster_3370	Pocillopora_meandrina_HIv1___Sc0000009	7320318	7320738	421	370	277	1.0	+	UGUGUUGUUCUUUGGGGC	6	97	147	26	30	29	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7432988-7433516	Cluster_3371	Pocillopora_meandrina_HIv1___Sc0000009	7432988	7433516	529	927	229	0.16612729234088458	-	AACGCUUGUAAAGAAGAGGCUGAGGUG	95	17	843	4	8	12	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7461285-7461711	Cluster_3372	Pocillopora_meandrina_HIv1___Sc0000009	7461285	7461711	427	177	69	0.07344632768361582	-	ACACAAUCAAAGAACUGGGGGAUAUAGU	27	4	154	2	2	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7540988-7541419	Cluster_3373	Pocillopora_meandrina_HIv1___Sc0000009	7540988	7541419	432	1300	189	0.9346153846153846	+	AUGUAGAGUGUCUUUAAGGUCAAUA	215	55	894	3	12	112	224	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7541597-7542025	Cluster_3374	Pocillopora_meandrina_HIv1___Sc0000009	7541597	7542025	429	150	32	0.8466666666666667	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	36	0	144	2	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7547952-7548381	Cluster_3375	Pocillopora_meandrina_HIv1___Sc0000009	7547952	7548381	430	507	67	0.980276134122288	+	UAUAGAGUGGAUGCAUUCUGAUCUUUAC	294	1	501	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7553820-7554722	Cluster_3376	Pocillopora_meandrina_HIv1___Sc0000009	7553820	7554722	903	1146	399	0.9729493891797557	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	165	13	1092	5	4	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7554812-7556026	Cluster_3377	Pocillopora_meandrina_HIv1___Sc0000009	7554812	7556026	1215	836	379	0.9270334928229665	+	UCCACGUCGUCUUUGGGGUUAAAAUACUU	109	15	767	6	4	19	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7556515-7556950	Cluster_3378	Pocillopora_meandrina_HIv1___Sc0000009	7556515	7556950	436	256	104	0.9453125	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	43	1	241	0	2	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7559916-7561559	Cluster_3379	Pocillopora_meandrina_HIv1___Sc0000009	7559916	7561559	1644	2101	614	0.9152784388386482	+	UUGUUGAACAUGACGAGGGUAGUUUGAGU	72	64	1867	19	9	37	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7580526-7580953	Cluster_3380	Pocillopora_meandrina_HIv1___Sc0000009	7580526	7580953	428	129	29	0.046511627906976744	-	UUCAUGCUCUCGUUGUUCGACUGAACG	29	1	127	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7893231-7893834	Cluster_3381	Pocillopora_meandrina_HIv1___Sc0000009	7893231	7893834	604	407	126	0.26044226044226043	.	CCCUAUCGGGCGCCA	73	82	260	11	2	7	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7900058-7900668	Cluster_3382	Pocillopora_meandrina_HIv1___Sc0000009	7900058	7900668	611	438	187	0.91324200913242	+	UUCGAAUUGUUUGUGAUCCCACACUUCA	37	27	349	11	7	6	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7954268-7955172	Cluster_3383	Pocillopora_meandrina_HIv1___Sc0000009	7954268	7955172	905	3096	348	0.013242894056847546	-	UCUGGAUUAUAGUCAAGCUCUGUCAUGG	873	4	3030	4	10	20	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:7955228-7955635	Cluster_3384	Pocillopora_meandrina_HIv1___Sc0000009	7955228	7955635	408	86	42	0.023255813953488372	-	UGUAACUCAACUAUUUUAAUUUCUGACUGU	8	0	84	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8094772-8095805	Cluster_3385	Pocillopora_meandrina_HIv1___Sc0000009	8094772	8095805	1034	15429	625	0.9963056581761618	+	UUGGAACGUGUUGCUGAACGCUUGUUGU	5838	59	15145	9	28	144	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8095873-8096302	Cluster_3386	Pocillopora_meandrina_HIv1___Sc0000009	8095873	8096302	430	189	87	0.7195767195767195	.	GUGGAAUUAAAAGAAGGGACAAUUAACAGU	28	10	173	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8101210-8101638	Cluster_3387	Pocillopora_meandrina_HIv1___Sc0000009	8101210	8101638	429	392	71	0.9489795918367347	+	AGUGUGAUCAUUGUCAAAAGACUUUUGCA	164	1	372	0	0	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8101892-8102322	Cluster_3388	Pocillopora_meandrina_HIv1___Sc0000009	8101892	8102322	431	1856	256	0.9725215517241379	+	UGUGUUAGACUUUAACAGGAAAGAAUG	643	13	1786	25	5	4	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8102656-8103065	Cluster_3389	Pocillopora_meandrina_HIv1___Sc0000009	8102656	8103065	410	90	29	0.8	+	UGUUACAAAACCAUUAGAACUAUCAGUU	22	1	72	0	1	0	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8104117-8105817	Cluster_3390	Pocillopora_meandrina_HIv1___Sc0000009	8104117	8105817	1701	4030	1061	0.7372208436724565	.	UUAUAUCUUCGGUCAAAAAGUGCACUUU	340	70	3575	31	25	134	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8109946-8110374	Cluster_3391	Pocillopora_meandrina_HIv1___Sc0000009	8109946	8110374	429	989	133	0.9919110212335692	+	AUGUAGAGUGUCUUUAAGGUCAAUA	174	38	725	2	9	85	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8110551-8111011	Cluster_3392	Pocillopora_meandrina_HIv1___Sc0000009	8110551	8111011	461	220	58	0.8681818181818182	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	49	1	212	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8140529-8140952	Cluster_3393	Pocillopora_meandrina_HIv1___Sc0000009	8140529	8140952	424	109	40	0.22018348623853212	.	UCCAUGAUUUGAGGACUUUCCACUG	17	1	79	3	1	8	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8147702-8148216	Cluster_3394	Pocillopora_meandrina_HIv1___Sc0000009	8147702	8148216	515	853	141	0.2543962485345838	.	GUGUGAAACAUGUGGCCUCAGGCAGAAAGU	168	10	663	0	2	86	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8241863-8242270	Cluster_3395	Pocillopora_meandrina_HIv1___Sc0000009	8241863	8242270	408	173	99	0.3815028901734104	.	ACUGGAUACAAAACUGCUCGAUGC	25	2	124	1	1	6	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8242665-8243092	Cluster_3396	Pocillopora_meandrina_HIv1___Sc0000009	8242665	8243092	428	213	100	0.03755868544600939	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	51	1	206	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8299725-8300158	Cluster_3397	Pocillopora_meandrina_HIv1___Sc0000009	8299725	8300158	434	458	202	0.19213973799126638	-	UAUGACGUUCCAGAAUCUUUGACAAAA	34	1	431	4	4	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8300696-8301124	Cluster_3398	Pocillopora_meandrina_HIv1___Sc0000009	8300696	8301124	429	134	48	0.022388059701492536	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	18	2	131	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:8380658-8381106	Cluster_3399	Pocillopora_meandrina_HIv1___Sc0000009	8380658	8381106	449	969	50	0.08978328173374613	-	UGCUUCAUUUCCCUGACUGUAGUCAGC	740	1	953	0	0	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9147716-9148131	Cluster_3400	Pocillopora_meandrina_HIv1___Sc0000009	9147716	9148131	416	256	19	0.0546875	-	CGGACCUCAGAUCAGA	184	246	6	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9614509-9614937	Cluster_3401	Pocillopora_meandrina_HIv1___Sc0000009	9614509	9614937	429	147	34	0.1360544217687075	-	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	34	1	141	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9615120-9615547	Cluster_3402	Pocillopora_meandrina_HIv1___Sc0000009	9615120	9615547	428	249	76	0.15261044176706828	-	AGAAUGUAGAGUGUCUUUAAGGUCAAUA	35	4	201	0	2	5	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9616173-9616900	Cluster_3403	Pocillopora_meandrina_HIv1___Sc0000009	9616173	9616900	728	506	139	0.8241106719367589	+	UCGCAAAAAGGAAUGACAAACAUCUGCC	97	3	456	1	2	5	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9653757-9654172	Cluster_3404	Pocillopora_meandrina_HIv1___Sc0000009	9653757	9654172	416	125	3	1.0	+	CCUUGCGGCGGGGCCU	122	125	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9689135-9689550	Cluster_3405	Pocillopora_meandrina_HIv1___Sc0000009	9689135	9689550	416	116	5	1.0	+	CCUUGCGGCGGGGCCU	111	116	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9749132-9750247	Cluster_3406	Pocillopora_meandrina_HIv1___Sc0000009	9749132	9750247	1116	1156	441	0.17906574394463667	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	74	7	1078	2	11	14	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:9992977-9993392	Cluster_3407	Pocillopora_meandrina_HIv1___Sc0000009	9992977	9993392	416	114	51	0.956140350877193	+	UAUGUCACUUUUGUCGAAUGGUAAAUCGG	19	5	102	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10299099-10299522	Cluster_3408	Pocillopora_meandrina_HIv1___Sc0000009	10299099	10299522	424	285	63	0.07719298245614035	-	AUGGACAGAACACAGGAAGUGCU	60	14	98	5	10	120	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10301166-10301592	Cluster_3409	Pocillopora_meandrina_HIv1___Sc0000009	10301166	10301592	427	130	44	0.9923076923076923	+	UGGGAUUGCUUACUCCUGGUGUUGGUAUA	24	1	122	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10335940-10336465	Cluster_3410	Pocillopora_meandrina_HIv1___Sc0000009	10335940	10336465	526	26667	1511	0.000862489218884764	-	CCCCGUGUUGUAGGCUU	2277	12471	7308	677	1387	2783	2041	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10336550-10336970	Cluster_3411	Pocillopora_meandrina_HIv1___Sc0000009	10336550	10336970	421	178	44	0.9943820224719101	+	AUCGCUUCUCGGCCUUUUGGC	42	108	1	60	9	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10340561-10341094	Cluster_3412	Pocillopora_meandrina_HIv1___Sc0000009	10340561	10341094	534	7567	1113	0.9993392361569975	+	GUUGCCUCGGUAUAGCACUACCU	426	3712	1765	355	324	1038	373	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10344528-10344967	Cluster_3413	Pocillopora_meandrina_HIv1___Sc0000009	10344528	10344967	440	847	307	0.9940968122786304	+	UGUGAUCAAGGAGGCAGUCCU	51	346	145	148	93	61	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10363328-10363752	Cluster_3414	Pocillopora_meandrina_HIv1___Sc0000009	10363328	10363752	425	296	68	0.07432432432432433	-	AUGGACAGAACACAGGAAGUGCU	57	9	108	4	11	125	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10446213-10446843	Cluster_3415	Pocillopora_meandrina_HIv1___Sc0000009	10446213	10446843	631	500	194	0.954	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	44	1	486	3	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10447035-10447641	Cluster_3416	Pocillopora_meandrina_HIv1___Sc0000009	10447035	10447641	607	432	191	0.4166666666666667	.	CGCAUCUUUAUCCAUCACUCAAAGCGGACU	62	9	363	6	6	5	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10480085-10480514	Cluster_3417	Pocillopora_meandrina_HIv1___Sc0000009	10480085	10480514	430	361	136	0.9695290858725761	+	UGAGAAUCUGUUUGGGUCAAUGAUCACAUU	101	7	341	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10482167-10482580	Cluster_3418	Pocillopora_meandrina_HIv1___Sc0000009	10482167	10482580	414	353	179	0.9716713881019831	+	UACAUGAUGAAAGACUGGAUGAUCACUGCC	16	7	338	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10482717-10483472	Cluster_3419	Pocillopora_meandrina_HIv1___Sc0000009	10482717	10483472	756	448	266	0.9866071428571429	+	UGCACUCGGAUCUCUACCCAUUCUAUGAGU	17	6	427	2	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10484435-10484992	Cluster_3420	Pocillopora_meandrina_HIv1___Sc0000009	10484435	10484992	558	711	205	0.9704641350210971	+	UCCGGCUCGAAGGACCA	117	323	364	0	5	3	16	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000009:10656954-10657383	Cluster_3421	Pocillopora_meandrina_HIv1___Sc0000009	10656954	10657383	430	370	54	0.0	-	AUUGUUUGGAUGUGUCUGCAAAUGCAGUGC	93	0	366	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10657567-10657989	Cluster_3422	Pocillopora_meandrina_HIv1___Sc0000009	10657567	10657989	423	126	52	0.2222222222222222	.	AUGUAGAGUGUCUUUAAGGUCAAC	46	7	48	3	1	8	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10658624-10659053	Cluster_3423	Pocillopora_meandrina_HIv1___Sc0000009	10658624	10659053	430	705	56	0.975886524822695	+	AAAGGAAUGACAAACAUCUGCCCCAAAGGU	382	9	689	0	3	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10749850-10750278	Cluster_3424	Pocillopora_meandrina_HIv1___Sc0000009	10749850	10750278	429	175	59	0.18857142857142858	-	UUUUCCAUUUCGUCUUUCAGAAAGCUGAU	32	0	164	2	3	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10752547-10752967	Cluster_3425	Pocillopora_meandrina_HIv1___Sc0000009	10752547	10752967	421	197	115	0.01015228426395939	-	UUCUAUACCAUCGCCGAAAUGUCUGGACU	15	3	184	0	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10997752-10998588	Cluster_3426	Pocillopora_meandrina_HIv1___Sc0000009	10997752	10998588	837	1089	256	0.9632690541781451	+	UAAGAUUUACACACUGAUCGACCAUGU	388	17	1042	3	7	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10998592-10999000	Cluster_3427	Pocillopora_meandrina_HIv1___Sc0000009	10998592	10999000	409	228	108	0.956140350877193	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	21	0	217	2	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10999375-10999801	Cluster_3428	Pocillopora_meandrina_HIv1___Sc0000009	10999375	10999801	427	287	122	0.9094076655052264	+	UCCAAUCACACACAGUUCUCCUGCGGC	57	1	270	0	2	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:10999818-11000311	Cluster_3429	Pocillopora_meandrina_HIv1___Sc0000009	10999818	11000311	494	776	248	0.9291237113402062	+	UCGGUCUGGGAGUACUUGCGCUCACAC	56	9	740	0	4	5	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11001183-11002453	Cluster_3430	Pocillopora_meandrina_HIv1___Sc0000009	11001183	11002453	1271	1244	493	0.9027331189710611	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	96	14	1172	2	6	17	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11074194-11074662	Cluster_3431	Pocillopora_meandrina_HIv1___Sc0000009	11074194	11074662	469	532	161	0.9962406015037594	+	UUUUUUGAUUUGGCAAAGCUUGAAAUUUCC	166	11	507	5	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11075604-11076016	Cluster_3432	Pocillopora_meandrina_HIv1___Sc0000009	11075604	11076016	413	99	43	1.0	+	UGGAUAAAAACGACUGGGAUAAGAUAUAUGC	19	4	88	0	5	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11092081-11092707	Cluster_3433	Pocillopora_meandrina_HIv1___Sc0000009	11092081	11092707	627	229	85	0.0	-	UAUUAGUUUUUCCGCUCUUUUGAAGUCU	28	1	227	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11100880-11101287	Cluster_3434	Pocillopora_meandrina_HIv1___Sc0000009	11100880	11101287	408	174	106	0.3333333333333333	.	ACUGGAUACAAAACUGCUCGAUGC	16	3	128	1	1	8	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11101682-11102109	Cluster_3435	Pocillopora_meandrina_HIv1___Sc0000009	11101682	11102109	428	208	90	0.03365384615384615	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	52	1	202	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11246399-11247187	Cluster_3436	Pocillopora_meandrina_HIv1___Sc0000009	11246399	11247187	789	875	334	0.064	-	UCCGUGACACAACGACUUUGCCUUGCUU	108	11	842	2	2	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11247357-11247793	Cluster_3437	Pocillopora_meandrina_HIv1___Sc0000009	11247357	11247793	437	439	209	0.1958997722095672	-	UAUGACGUUCCAGAAUCUUUGACAAAA	33	1	416	5	6	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11248328-11248756	Cluster_3438	Pocillopora_meandrina_HIv1___Sc0000009	11248328	11248756	429	142	49	0.0	-	AAACGAUUGAAUAGCAUAACUGAUGAACUA	16	1	139	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11353108-11354064	Cluster_3439	Pocillopora_meandrina_HIv1___Sc0000009	11353108	11354064	957	2358	239	0.9923664122137404	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	605	7	2335	4	0	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11384201-11384618	Cluster_3440	Pocillopora_meandrina_HIv1___Sc0000009	11384201	11384618	418	204	32	0.9852941176470589	+	GGCGGUGGGAUCUCCU	79	202	0	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11391214-11391967	Cluster_3441	Pocillopora_meandrina_HIv1___Sc0000009	11391214	11391967	754	447	253	0.03131991051454139	-	UGGUUUACAGCGUGCUUUGAAGGUUUUAA	19	6	421	1	6	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11392410-11392838	Cluster_3442	Pocillopora_meandrina_HIv1___Sc0000009	11392410	11392838	429	149	62	0.020134228187919462	-	UGCUCAUAUCUAAUAGGACAACUGCCGUU	54	1	144	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11533128-11533596	Cluster_3443	Pocillopora_meandrina_HIv1___Sc0000009	11533128	11533596	469	574	148	0.9965156794425087	+	UUUUUUGAUUUGGCAAAGCUUGAAAUUUCC	181	14	548	3	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11534538-11534950	Cluster_3444	Pocillopora_meandrina_HIv1___Sc0000009	11534538	11534950	413	89	46	0.9887640449438202	+	UGGGAUAAGAUAUAUGCGAGACUAUUAGCA	11	1	85	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11551003-11551630	Cluster_3445	Pocillopora_meandrina_HIv1___Sc0000009	11551003	11551630	628	264	94	0.0	-	UAUUAGUUUUUCCGCUCUUUUGAAGUCU	34	3	260	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11649053-11649873	Cluster_3446	Pocillopora_meandrina_HIv1___Sc0000009	11649053	11649873	821	981	311	0.1926605504587156	-	UGACUUCGUGCCAUCUCUUGUGAUUAUU	122	21	879	5	7	15	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11656065-11657100	Cluster_3447	Pocillopora_meandrina_HIv1___Sc0000009	11656065	11657100	1036	430	114	0.1813953488372093	-	AUGUAGAGUGUCUUUAAGGUCAAC	49	10	313	3	2	26	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11767958-11768545	Cluster_3448	Pocillopora_meandrina_HIv1___Sc0000009	11767958	11768545	588	455	174	0.4703296703296703	.	UGUUAUAUCUGCAUCGGAUGUUAAAGUGC	48	19	417	4	6	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11778166-11778591	Cluster_3449	Pocillopora_meandrina_HIv1___Sc0000009	11778166	11778591	426	195	40	0.0	-	UCCGAUUUAAAAGAUUCUUUGUUUGU	128	2	191	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11778872-11779300	Cluster_3450	Pocillopora_meandrina_HIv1___Sc0000009	11778872	11779300	429	223	53	0.03139013452914798	-	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	75	0	219	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11791398-11791862	Cluster_3451	Pocillopora_meandrina_HIv1___Sc0000009	11791398	11791862	465	476	172	0.05042016806722689	-	UGAUGCUGUCGCGUGUACUGCCGAAAAGA	40	5	446	3	0	2	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11792402-11792830	Cluster_3452	Pocillopora_meandrina_HIv1___Sc0000009	11792402	11792830	429	165	32	0.0	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	80	1	164	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11909906-11911021	Cluster_3453	Pocillopora_meandrina_HIv1___Sc0000009	11909906	11911021	1116	942	372	0.9925690021231423	+	UGCUCAUAUCUAAUAGGACAACUGCCGUU	47	8	920	1	7	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11935729-11936154	Cluster_3454	Pocillopora_meandrina_HIv1___Sc0000009	11935729	11936154	426	727	187	0.0	-	CCCCGUGUUGUAGGCUU	87	429	163	14	30	53	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11936361-11936771	Cluster_3455	Pocillopora_meandrina_HIv1___Sc0000009	11936361	11936771	411	191	121	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	50	90	8	13	17	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11937947-11938372	Cluster_3456	Pocillopora_meandrina_HIv1___Sc0000009	11937947	11938372	426	705	195	0.0	-	CCCCGUGUUGUAGGCUU	65	380	176	16	28	65	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11938579-11938989	Cluster_3457	Pocillopora_meandrina_HIv1___Sc0000009	11938579	11938989	411	230	135	0.9956521739130435	+	CAAGUGUAGUAUCUGUUCU	12	84	83	9	14	17	23	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11940165-11940590	Cluster_3458	Pocillopora_meandrina_HIv1___Sc0000009	11940165	11940590	426	743	197	0.0	-	CCGUGUUGUAGGCUU	64	420	177	23	22	59	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11940797-11941341	Cluster_3459	Pocillopora_meandrina_HIv1___Sc0000009	11940797	11941341	545	268	167	0.996268656716418	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	7	86	97	11	21	36	17	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11942383-11942808	Cluster_3460	Pocillopora_meandrina_HIv1___Sc0000009	11942383	11942808	426	744	204	0.0	-	CCCCGUGUUGUAGGCUU	74	417	170	22	27	58	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11943015-11943457	Cluster_3461	Pocillopora_meandrina_HIv1___Sc0000009	11943015	11943457	443	244	152	0.9959016393442623	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	102	84	10	19	19	10	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11944601-11945026	Cluster_3462	Pocillopora_meandrina_HIv1___Sc0000009	11944601	11945026	426	722	189	0.0013850415512465374	-	CCGUGUUGUAGGCUU	58	388	192	10	25	69	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11945233-11945672	Cluster_3463	Pocillopora_meandrina_HIv1___Sc0000009	11945233	11945672	440	275	178	0.9963636363636363	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	94	112	11	17	24	17	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11946819-11947244	Cluster_3464	Pocillopora_meandrina_HIv1___Sc0000009	11946819	11947244	426	724	205	0.0	-	CCCCGUGUUGUAGGCUU	65	418	169	12	30	55	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11947451-11947887	Cluster_3465	Pocillopora_meandrina_HIv1___Sc0000009	11947451	11947887	437	252	150	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	81	105	9	16	22	19	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11949037-11949463	Cluster_3466	Pocillopora_meandrina_HIv1___Sc0000009	11949037	11949463	427	709	204	0.0014104372355430183	-	CCCCGUGUUGUAGGCUU	62	400	179	20	18	53	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11949660-11950079	Cluster_3467	Pocillopora_meandrina_HIv1___Sc0000009	11949660	11950079	420	238	137	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	80	112	4	11	17	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11951255-11951680	Cluster_3468	Pocillopora_meandrina_HIv1___Sc0000009	11951255	11951680	426	738	191	0.0013550135501355014	-	CCCCGUGUUGUAGGCUU	72	422	190	11	27	51	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11951887-11952297	Cluster_3469	Pocillopora_meandrina_HIv1___Sc0000009	11951887	11952297	411	261	163	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	88	105	12	22	17	17	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11953473-11953898	Cluster_3470	Pocillopora_meandrina_HIv1___Sc0000009	11953473	11953898	426	705	189	0.0	-	CCCCGUGUUGUAGGCUU	72	414	165	10	31	41	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11954105-11954548	Cluster_3471	Pocillopora_meandrina_HIv1___Sc0000009	11954105	11954548	444	279	168	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	111	105	15	17	22	9	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11955691-11956116	Cluster_3472	Pocillopora_meandrina_HIv1___Sc0000009	11955691	11956116	426	701	197	0.0014265335235378032	-	CCCCGUGUUGUAGGCUU	67	371	178	13	31	55	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11956323-11956733	Cluster_3473	Pocillopora_meandrina_HIv1___Sc0000009	11956323	11956733	411	229	145	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	71	94	11	17	19	17	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11957909-11958333	Cluster_3474	Pocillopora_meandrina_HIv1___Sc0000009	11957909	11958333	425	330	121	0.0	-	CCCCGUGUUGUAGGCUU	26	167	93	8	13	29	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11958541-11958984	Cluster_3475	Pocillopora_meandrina_HIv1___Sc0000009	11958541	11958984	444	272	180	0.9926470588235294	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	103	98	14	19	29	9	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11961267-11961693	Cluster_3476	Pocillopora_meandrina_HIv1___Sc0000009	11961267	11961693	427	316	171	0.9968354430379747	+	AGGUACUGUGAUCAAGG	12	171	62	21	32	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11962448-11962873	Cluster_3477	Pocillopora_meandrina_HIv1___Sc0000009	11962448	11962873	426	700	182	0.0014285714285714286	-	CCGUGUUGUAGGCUU	53	407	174	14	23	54	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11963080-11963490	Cluster_3478	Pocillopora_meandrina_HIv1___Sc0000009	11963080	11963490	411	210	146	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	70	96	10	10	13	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11964666-11965091	Cluster_3479	Pocillopora_meandrina_HIv1___Sc0000009	11964666	11965091	426	719	195	0.0013908205841446453	-	CCCCGUGUUGUAGGCUU	85	426	163	16	22	56	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11965298-11965708	Cluster_3480	Pocillopora_meandrina_HIv1___Sc0000009	11965298	11965708	411	242	153	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	79	103	12	19	18	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11966884-11967309	Cluster_3481	Pocillopora_meandrina_HIv1___Sc0000009	11966884	11967309	426	677	182	0.0014771048744460858	-	CCCCGUGUUGUAGGCUU	75	390	166	17	33	44	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11967516-11967926	Cluster_3482	Pocillopora_meandrina_HIv1___Sc0000009	11967516	11967926	411	245	147	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	91	93	12	16	17	16	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11969102-11969527	Cluster_3483	Pocillopora_meandrina_HIv1___Sc0000009	11969102	11969527	426	709	203	0.0	-	CCGUGUUGUAGGCUU	49	399	176	17	23	58	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11969737-11970176	Cluster_3484	Pocillopora_meandrina_HIv1___Sc0000009	11969737	11970176	440	244	154	0.9959016393442623	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	7	94	78	16	15	22	19	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11971320-11971744	Cluster_3485	Pocillopora_meandrina_HIv1___Sc0000009	11971320	11971744	425	513	150	0.0	-	CCCCGUGUUGUAGGCUU	44	292	117	13	18	47	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11971952-11972395	Cluster_3486	Pocillopora_meandrina_HIv1___Sc0000009	11971952	11972395	444	274	174	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	103	97	12	21	27	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11973539-11973963	Cluster_3487	Pocillopora_meandrina_HIv1___Sc0000009	11973539	11973963	425	328	116	0.0	-	CCCCGUGUUGUAGGCUU	21	180	84	8	12	28	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11974168-11974577	Cluster_3488	Pocillopora_meandrina_HIv1___Sc0000009	11974168	11974577	410	162	107	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	49	80	4	8	8	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11975753-11976177	Cluster_3489	Pocillopora_meandrina_HIv1___Sc0000009	11975753	11976177	425	460	141	0.0	-	CCGUGUUGUAGGCUU	35	266	101	9	16	37	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11976409-11976947	Cluster_3490	Pocillopora_meandrina_HIv1___Sc0000009	11976409	11976947	539	6793	732	1.0	+	CUACCUCCGAGUGCGGCCCACU	462	3941	505	584	1144	539	80	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11977971-11978462	Cluster_3491	Pocillopora_meandrina_HIv1___Sc0000009	11977971	11978462	492	5609	632	0.00017828489926903192	-	GGAAUACCCCGUGUUGUAGGCUU	347	2318	1621	207	326	716	421	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11978605-11979162	Cluster_3492	Pocillopora_meandrina_HIv1___Sc0000009	11978605	11979162	558	3264	824	0.9990808823529411	+	GUUGCCUCGGUAUAGCACUACCUCCG	216	1408	1007	136	163	410	140	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11980190-11980607	Cluster_3493	Pocillopora_meandrina_HIv1___Sc0000009	11980190	11980607	418	157	75	0.0	-	CCCCGUGUUGUAGGCUU	16	87	27	6	9	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000009:11980819-11981229	Cluster_3494	Pocillopora_meandrina_HIv1___Sc0000009	11980819	11981229	411	165	102	0.9939393939393939	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	22	46	85	8	4	11	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000009:11982404-11982828	Cluster_3495	Pocillopora_meandrina_HIv1___Sc0000009	11982404	11982828	425	426	138	0.002347417840375587	-	CCCCGUGUUGUAGGCUU	42	260	90	13	12	29	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:21014-21421	Cluster_3496	Pocillopora_meandrina_HIv1___Sc0000010	21014	21421	408	155	121	0.8129032258064516	+	UUGCCGUGCGUCUGUUCAG	5	65	26	17	21	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:140324-140751	Cluster_3497	Pocillopora_meandrina_HIv1___Sc0000010	140324	140751	428	193	79	0.9326424870466321	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	88	0	183	1	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:142783-143192	Cluster_3498	Pocillopora_meandrina_HIv1___Sc0000010	142783	143192	410	334	198	0.7425149700598802	.	CGCGGUUACAAAGAAGAUGACAGA	17	2	267	6	8	17	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:144003-144426	Cluster_3499	Pocillopora_meandrina_HIv1___Sc0000010	144003	144426	424	230	103	0.7782608695652173	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	24	8	194	4	7	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:177177-177603	Cluster_3500	Pocillopora_meandrina_HIv1___Sc0000010	177177	177603	427	192	51	0.9895833333333334	+	UGUUAAUCGAGAGAAGCAUAGACGCAA	52	0	186	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:189687-190103	Cluster_3501	Pocillopora_meandrina_HIv1___Sc0000010	189687	190103	417	115	11	0.0	-	CUUGGAAUAGAGCGUGU	54	115	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:245476-245890	Cluster_3502	Pocillopora_meandrina_HIv1___Sc0000010	245476	245890	415	2034	3	0.0	-	AGGAGAACGUAGGGU	2030	2034	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:413633-414064	Cluster_3503	Pocillopora_meandrina_HIv1___Sc0000010	413633	414064	432	589	186	0.03735144312393888	-	UGGGAAAACGAGAACAGCGUGAGUGUUUU	34	1	498	1	2	19	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:414179-414606	Cluster_3504	Pocillopora_meandrina_HIv1___Sc0000010	414179	414606	428	531	104	0.05273069679849341	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	174	7	497	1	2	21	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:684049-684477	Cluster_3505	Pocillopora_meandrina_HIv1___Sc0000010	684049	684477	429	289	119	0.9930795847750865	+	UGAUCUUGCAGAGCACAAUCAGAUUCUGA	45	7	269	2	0	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:685197-685956	Cluster_3506	Pocillopora_meandrina_HIv1___Sc0000010	685197	685956	760	4084	673	0.9990205680705191	+	UCAUGAUCACUUAGAGGGUUUGCACUCAUA	457	87	3922	17	32	15	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:685970-687014	Cluster_3507	Pocillopora_meandrina_HIv1___Sc0000010	685970	687014	1045	2017	348	0.999008428358949	+	UAUGCAUCGACUUUCACACAGCACUUAGAUU	325	39	1931	9	1	5	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:687962-688391	Cluster_3508	Pocillopora_meandrina_HIv1___Sc0000010	687962	688391	430	403	192	0.9950372208436724	+	UUUUCUUGUAAUUGACUGUCUAGUUUGCCU	26	6	382	2	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:689527-689956	Cluster_3509	Pocillopora_meandrina_HIv1___Sc0000010	689527	689956	430	496	86	0.9979838709677419	+	UGAAAGGAGAUUUAGUAGACUGAAGGAAUA	95	5	472	2	6	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:690399-690828	Cluster_3510	Pocillopora_meandrina_HIv1___Sc0000010	690399	690828	430	247	66	0.9959514170040485	+	UACAUGUGUACUGGUAGAGAAAACCCUCC	62	3	241	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:691758-692158	Cluster_3511	Pocillopora_meandrina_HIv1___Sc0000010	691758	692158	401	146	70	1.0	+	UGUUCUAGUCAUUGAAACCUGCAUUUGUU	17	2	141	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:693529-693951	Cluster_3512	Pocillopora_meandrina_HIv1___Sc0000010	693529	693951	423	204	75	0.9803921568627451	+	UGUGUCACGUUCUCAUCUGAAAC	41	8	155	0	0	41	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:697762-698180	Cluster_3513	Pocillopora_meandrina_HIv1___Sc0000010	697762	698180	419	155	75	0.05806451612903226	-	UCUUCCGGUCUGUUUUCGCUUUUUCUGGA	20	7	138	2	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:713480-713909	Cluster_3514	Pocillopora_meandrina_HIv1___Sc0000010	713480	713909	430	213	82	0.9859154929577465	+	UGCUUCAUUUUGAGCUUCUCUGAUCAUAUC	74	4	203	2	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:742812-743213	Cluster_3515	Pocillopora_meandrina_HIv1___Sc0000010	742812	743213	402	157	96	0.9363057324840764	+	GACACUCUGUCUCGGG	11	51	103	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:751294-751723	Cluster_3516	Pocillopora_meandrina_HIv1___Sc0000010	751294	751723	430	494	128	0.9919028340080972	+	UAUGACGGUACUUUCAAUGGCUUCAGGC	145	6	459	4	12	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:751993-752775	Cluster_3517	Pocillopora_meandrina_HIv1___Sc0000010	751993	752775	783	4860	454	0.9991769547325103	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	1085	158	4663	3	1	8	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:755612-756456	Cluster_3518	Pocillopora_meandrina_HIv1___Sc0000010	755612	756456	845	1872	369	0.8370726495726496	+	UAAGUACUGUCGGAGUUGAACCUUUACGGC	666	25	1794	8	9	25	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:761708-762259	Cluster_3519	Pocillopora_meandrina_HIv1___Sc0000010	761708	762259	552	552	172	0.9021739130434783	+	UGAUUAGAAUCGGGAACAACCA	107	10	402	2	109	8	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:769669-770096	Cluster_3520	Pocillopora_meandrina_HIv1___Sc0000010	769669	770096	428	186	51	1.0	+	UUGGAUCUGUCACUUUCUCGUGAUGCAC	60	7	176	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:790303-790772	Cluster_3521	Pocillopora_meandrina_HIv1___Sc0000010	790303	790772	470	919	179	0.9727965179542981	+	UAAUCGCAACAGGGAAACUAGACUCCGA	214	10	866	2	2	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:794554-795950	Cluster_3522	Pocillopora_meandrina_HIv1___Sc0000010	794554	795950	1397	6570	1471	0.8981735159817351	+	AUCCCACCGCUGCCACCA	246	788	5330	31	25	126	270	N	N	cgr-miR-1260
Pocillopora_meandrina_HIv1___Sc0000010:796195-796604	Cluster_3523	Pocillopora_meandrina_HIv1___Sc0000010	796195	796604	410	157	91	0.6624203821656051	.	UAUUUCCUUCUCAACUGUCCAUCGCCAGG	9	12	107	5	10	15	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:797151-797761	Cluster_3524	Pocillopora_meandrina_HIv1___Sc0000010	797151	797761	611	372	121	0.9946236559139785	+	UCGGUACUCUGUUCAAUAAUAUUUCUC	71	6	360	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:801842-803261	Cluster_3525	Pocillopora_meandrina_HIv1___Sc0000010	801842	803261	1420	8016	1199	0.780439121756487	.	UAUGAAAGAUCUUGAUGUGGUGCGUCA	519	121	7689	35	30	45	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:804480-805610	Cluster_3526	Pocillopora_meandrina_HIv1___Sc0000010	804480	805610	1131	8356	1512	0.8951651507898516	+	UGAAAGGUACUUUCCGAAUGUUAGCAGAC	640	534	7201	31	104	282	204	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:807657-808087	Cluster_3527	Pocillopora_meandrina_HIv1___Sc0000010	807657	808087	431	448	129	0.9308035714285714	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	107	15	410	2	0	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:808222-808626	Cluster_3528	Pocillopora_meandrina_HIv1___Sc0000010	808222	808626	405	257	161	0.7898832684824902	.	UCUACCACAUCUUUAGCAUCUGAUUUAA	11	10	215	2	1	6	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:820776-821202	Cluster_3529	Pocillopora_meandrina_HIv1___Sc0000010	820776	821202	427	161	58	0.8819875776397516	+	UGAGUACGGGCACUUAAGAGUUUGAUG	22	10	140	0	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:838175-838603	Cluster_3530	Pocillopora_meandrina_HIv1___Sc0000010	838175	838603	429	305	71	0.980327868852459	+	UAGGACAACUGAGAAUCCACGUAGACUC	111	1	297	1	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:842933-843354	Cluster_3531	Pocillopora_meandrina_HIv1___Sc0000010	842933	843354	422	200	120	0.46	.	UCUUUUACCAUAUCUAAAACUCCACAUU	9	4	175	0	3	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:843490-844196	Cluster_3532	Pocillopora_meandrina_HIv1___Sc0000010	843490	844196	707	490	232	0.7918367346938775	.	UCUUUUGGGUCGUAACUUGAAACAUUCAUA	51	7	450	4	6	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:874558-875361	Cluster_3533	Pocillopora_meandrina_HIv1___Sc0000010	874558	875361	804	16370	532	0.9031765424557117	+	UGCUUCAUUUCCCUGACUGUAGUCAGU	3198	60	14618	38	15	54	1585	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:897691-898120	Cluster_3534	Pocillopora_meandrina_HIv1___Sc0000010	897691	898120	430	1485	118	0.997979797979798	+	UCUUUCGGUCACGUGGGCUUCAAACGCGU	572	1	1475	0	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:919498-919932	Cluster_3535	Pocillopora_meandrina_HIv1___Sc0000010	919498	919932	435	819	180	0.967032967032967	+	UAUGACUUAGCUAAUUCCGAUACAUGA	85	2	790	4	2	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:920394-920916	Cluster_3536	Pocillopora_meandrina_HIv1___Sc0000010	920394	920916	523	568	167	0.8820422535211268	+	UCGAACUAACAAUAACCUCCUGCGAUAAAUU	105	35	490	12	1	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:922617-923034	Cluster_3537	Pocillopora_meandrina_HIv1___Sc0000010	922617	923034	418	405	53	0.02962962962962963	-	AGAUUGAGAGCUCUUU	87	394	10	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:928313-928739	Cluster_3538	Pocillopora_meandrina_HIv1___Sc0000010	928313	928739	427	327	149	0.9694189602446484	+	UAGGUAAUGGCACAAACUGAGAGGCGU	26	3	316	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:928820-931410	Cluster_3539	Pocillopora_meandrina_HIv1___Sc0000010	928820	931410	2591	2702	1197	0.9252405625462621	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	104	27	2515	9	11	39	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1017837-1018253	Cluster_3540	Pocillopora_meandrina_HIv1___Sc0000010	1017837	1018253	417	334	52	0.0029940119760479044	-	UUCUUAGUUGGUGGAGC	57	334	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1155444-1155861	Cluster_3541	Pocillopora_meandrina_HIv1___Sc0000010	1155444	1155861	418	3037	33	0.0	-	CGGCAUGCAAAAAAA	1049	3035	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1170327-1170748	Cluster_3542	Pocillopora_meandrina_HIv1___Sc0000010	1170327	1170748	422	308	143	0.9902597402597403	+	UAUGAAAUACAUCGGUGGACU	29	120	55	66	37	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1221542-1221956	Cluster_3543	Pocillopora_meandrina_HIv1___Sc0000010	1221542	1221956	415	91	6	0.989010989010989	+	CCCUUUCCGAGGUCGA	68	91	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1222391-1222817	Cluster_3544	Pocillopora_meandrina_HIv1___Sc0000010	1222391	1222817	427	1067	101	0.0	-	GGGGGCAUAGCUCAGUGGUAGAGCAUU	517	53	864	42	35	14	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1306165-1306587	Cluster_3545	Pocillopora_meandrina_HIv1___Sc0000010	1306165	1306587	423	625	110	0.0464	-	CUCGCCUCUACUUGACCUCAUUA	153	241	3	150	73	158	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1313084-1314286	Cluster_3546	Pocillopora_meandrina_HIv1___Sc0000010	1313084	1314286	1203	2431	372	0.22747840394899219	.	UAGAGAACGUUGCUGACACUGAAUGGUC	528	14	2378	1	7	6	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1335014-1335439	Cluster_3547	Pocillopora_meandrina_HIv1___Sc0000010	1335014	1335439	426	109	46	0.9541284403669725	+	CCUCGAGACUGUAAGGAGAGAGACGU	19	21	77	1	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1837638-1838066	Cluster_3548	Pocillopora_meandrina_HIv1___Sc0000010	1837638	1838066	429	209	89	0.0	-	UGCUCAUAUCUAAUAGGACAACUGCCGUU	38	0	203	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:1847194-1847622	Cluster_3549	Pocillopora_meandrina_HIv1___Sc0000010	1847194	1847622	429	256	102	0.92578125	+	UGUUUCAACUCUUGAAUGAUUCUUGCUU	35	0	246	1	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2001081-2001495	Cluster_3550	Pocillopora_meandrina_HIv1___Sc0000010	2001081	2001495	415	125	21	0.088	-	UCCCCGUCCGGGCCUCC	28	125	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2209255-2209659	Cluster_3551	Pocillopora_meandrina_HIv1___Sc0000010	2209255	2209659	405	147	101	0.4217687074829932	.	UGCGUCUGUUCAGUAAUGGA	13	89	21	20	11	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2415327-2415757	Cluster_3552	Pocillopora_meandrina_HIv1___Sc0000010	2415327	2415757	431	247	39	0.979757085020243	+	AGAGACUCGUCCAAAAUUACUCCUAAGUAUU	75	7	235	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2417998-2418410	Cluster_3553	Pocillopora_meandrina_HIv1___Sc0000010	2417998	2418410	413	148	76	0.9797297297297297	+	UGAUCUUCUGUUUUAUAUUUGAGCCAGC	22	3	141	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2427909-2428329	Cluster_3554	Pocillopora_meandrina_HIv1___Sc0000010	2427909	2428329	421	218	142	0.8623853211009175	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	14	2	201	3	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2428422-2428838	Cluster_3555	Pocillopora_meandrina_HIv1___Sc0000010	2428422	2428838	417	292	201	0.9554794520547946	+	UCAGACACGUGGAUACUUGCGAUGAAGU	16	1	272	1	2	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2429196-2429611	Cluster_3556	Pocillopora_meandrina_HIv1___Sc0000010	2429196	2429611	416	230	120	0.9391304347826087	+	UCUACGUCUAUCAACCAGGAAUGAAACUCGU	18	1	219	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2430352-2430778	Cluster_3557	Pocillopora_meandrina_HIv1___Sc0000010	2430352	2430778	427	183	55	0.6721311475409836	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	38	0	145	0	3	1	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2441809-2442508	Cluster_3558	Pocillopora_meandrina_HIv1___Sc0000010	2441809	2442508	700	1765	280	0.9019830028328611	+	CUCGGGCUGAGACUGGG	261	280	1392	6	44	12	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2449129-2450126	Cluster_3559	Pocillopora_meandrina_HIv1___Sc0000010	2449129	2450126	998	2243	456	0.9308961212661614	+	UGUUUGAUCCAAUUCAGGAUACUUUGGCG	285	24	2115	2	5	49	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2450219-2451571	Cluster_3560	Pocillopora_meandrina_HIv1___Sc0000010	2450219	2451571	1353	2802	660	0.9825124910778016	+	UCCAUGGCUCUUGUGUGCUUGUUGCAUA	396	44	2684	4	13	7	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2455281-2455708	Cluster_3561	Pocillopora_meandrina_HIv1___Sc0000010	2455281	2455708	428	294	108	0.9387755102040817	+	UGCAAGCUUCUCAUUAUUCGGCAGGACU	37	7	275	2	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2455924-2456773	Cluster_3562	Pocillopora_meandrina_HIv1___Sc0000010	2455924	2456773	850	2557	348	0.9972624168947986	+	UACUUCCUGUCACUGGACUGAUGAUGCC	640	24	2504	6	5	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2456983-2458012	Cluster_3563	Pocillopora_meandrina_HIv1___Sc0000010	2456983	2458012	1030	2312	436	0.9394463667820069	+	UCAGCAAACUGUUGGAAAUGCAUGCCAUC	635	57	2167	2	34	24	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2461300-2461706	Cluster_3564	Pocillopora_meandrina_HIv1___Sc0000010	2461300	2461706	407	218	127	0.944954128440367	+	UAGGAAAUGGCGUCCAGUAAGUCUUAGA	17	6	196	3	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2461732-2462159	Cluster_3565	Pocillopora_meandrina_HIv1___Sc0000010	2461732	2462159	428	325	167	0.8492307692307692	+	UAUUCUCAACAGUACUCAAAAAGGUAACACG	27	6	287	3	5	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2462681-2463360	Cluster_3566	Pocillopora_meandrina_HIv1___Sc0000010	2462681	2463360	680	287	144	0.8989547038327527	+	UGACAUGUCGAAACCCGUAAUCUAAAGU	29	6	265	3	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2463754-2464730	Cluster_3567	Pocillopora_meandrina_HIv1___Sc0000010	2463754	2464730	977	1077	252	0.9257195914577531	+	UAACUCCGAUCCGAUGACCUAGAAAGUC	139	14	1023	3	0	10	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2464979-2465572	Cluster_3568	Pocillopora_meandrina_HIv1___Sc0000010	2464979	2465572	594	1090	386	0.7293577981651376	.	UAUAUAUCCUCUGUGAUUGUCUGAUCAC	58	37	892	52	31	20	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2465839-2466345	Cluster_3569	Pocillopora_meandrina_HIv1___Sc0000010	2465839	2466345	507	738	320	0.7520325203252033	.	UCUGAUUGCAUAUACCUGUGAAACUUGU	93	11	656	10	5	25	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2466427-2467879	Cluster_3570	Pocillopora_meandrina_HIv1___Sc0000010	2466427	2467879	1453	5615	1140	0.9520926090828139	+	UAGGAGAUGUGUCUUUCCAGGCUCGAAA	844	42	5317	14	26	50	166	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2469759-2470188	Cluster_3571	Pocillopora_meandrina_HIv1___Sc0000010	2469759	2470188	430	107	23	0.9906542056074766	+	UGAAAACUGCACUCAACCAAAACUUUGAGC	61	3	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2478733-2479157	Cluster_3572	Pocillopora_meandrina_HIv1___Sc0000010	2478733	2479157	425	121	57	0.371900826446281	.	UACUUGUCUAUCCUGGACCACCGGAACA	37	5	110	0	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2479632-2480805	Cluster_3573	Pocillopora_meandrina_HIv1___Sc0000010	2479632	2480805	1174	3788	804	0.9601372756071805	+	UGAAUACUUAAGGGUCGGUCAGGCUGAUA	672	36	3592	26	22	47	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2480915-2481760	Cluster_3574	Pocillopora_meandrina_HIv1___Sc0000010	2480915	2481760	846	8325	798	0.9889489489489489	+	UGAGAUAUGUAUUCUUCUUCGAGGCAGA	2792	24	8127	42	11	32	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2482829-2483305	Cluster_3575	Pocillopora_meandrina_HIv1___Sc0000010	2482829	2483305	477	334	148	0.9281437125748503	+	UGAUUUAGAAAUAAGAAAUGAUUCU	23	3	323	3	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2491003-2491417	Cluster_3576	Pocillopora_meandrina_HIv1___Sc0000010	2491003	2491417	415	88	16	0.9886363636363636	+	UCAGACGUGGCGACCC	68	72	16	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2497239-2498165	Cluster_3577	Pocillopora_meandrina_HIv1___Sc0000010	2497239	2498165	927	3040	642	0.9634868421052631	+	UGAUGAUCGUUGACGGGAGAAAACUCACA	197	39	2918	13	11	28	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2498272-2499133	Cluster_3578	Pocillopora_meandrina_HIv1___Sc0000010	2498272	2499133	862	2774	640	0.9509733237202596	+	UGAACAUGUAGGAAACUGACUUUUGGUC	452	19	2628	11	12	24	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2499159-2501060	Cluster_3579	Pocillopora_meandrina_HIv1___Sc0000010	2499159	2501060	1902	5092	1555	0.8910054988216811	+	UAUUCGUCUAGAGUUUCACCAACCUGU	367	99	4738	32	21	75	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2506868-2507295	Cluster_3580	Pocillopora_meandrina_HIv1___Sc0000010	2506868	2507295	428	180	88	0.9444444444444444	+	UCGGUUAUCAUUACUAUUUGCAUCUUCAUC	27	13	161	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2514789-2515215	Cluster_3581	Pocillopora_meandrina_HIv1___Sc0000010	2514789	2515215	427	96	13	0.9791666666666666	+	UAACCCGAGAACUGACACGUGAGUAGUC	63	1	81	0	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2519340-2519767	Cluster_3582	Pocillopora_meandrina_HIv1___Sc0000010	2519340	2519767	428	95	16	0.9578947368421052	+	UAACCCGAGAACUGACACGUGAGUAGUC	65	0	87	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2522763-2523192	Cluster_3583	Pocillopora_meandrina_HIv1___Sc0000010	2522763	2523192	430	174	29	1.0	+	UGACUUGCACAGCUUCUUGAAAUAAACAGG	48	2	163	0	0	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2536734-2537162	Cluster_3584	Pocillopora_meandrina_HIv1___Sc0000010	2536734	2537162	429	132	28	0.9924242424242424	+	UAUUCCAACCGAUCUACUAAUUUUGUGAC	61	0	132	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2537629-2538055	Cluster_3585	Pocillopora_meandrina_HIv1___Sc0000010	2537629	2538055	427	110	24	0.9818181818181818	+	AACGUGCUACUGAUUCUGGUGAAGACAUUC	37	2	98	0	10	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2564845-2565267	Cluster_3586	Pocillopora_meandrina_HIv1___Sc0000010	2564845	2565267	423	137	53	0.9854014598540146	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	20	1	136	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2565802-2566238	Cluster_3587	Pocillopora_meandrina_HIv1___Sc0000010	2565802	2566238	437	458	193	0.8231441048034934	+	UAUGACGUUCCAGAAUCUUUGACAAAA	33	3	439	2	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2566408-2567145	Cluster_3588	Pocillopora_meandrina_HIv1___Sc0000010	2566408	2567145	738	872	333	0.926605504587156	+	UCCGUGACACAACGACUUUGCCUUGCUU	109	7	843	1	2	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2571020-2571648	Cluster_3589	Pocillopora_meandrina_HIv1___Sc0000010	2571020	2571648	629	1847	211	0.9956686518678939	+	UGAUUGGUGCAUUUCGAUCCUUGCUGU	692	8	1831	2	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:2602297-2602713	Cluster_3590	Pocillopora_meandrina_HIv1___Sc0000010	2602297	2602713	417	80	20	0.925	+	AGCAUGACGAAGGUUAGAGAUCGAC	39	2	52	2	0	5	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3002204-3002629	Cluster_3591	Pocillopora_meandrina_HIv1___Sc0000010	3002204	3002629	426	134	63	0.8880597014925373	+	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	20	1	122	0	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3008210-3008649	Cluster_3592	Pocillopora_meandrina_HIv1___Sc0000010	3008210	3008649	440	858	162	0.045454545454545456	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	214	1	837	1	2	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3150264-3150692	Cluster_3593	Pocillopora_meandrina_HIv1___Sc0000010	3150264	3150692	429	273	156	0.17582417582417584	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	28	4	246	0	2	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3151922-3152623	Cluster_3594	Pocillopora_meandrina_HIv1___Sc0000010	3151922	3152623	702	255	134	0.06274509803921569	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	27	5	237	2	4	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3204209-3204630	Cluster_3595	Pocillopora_meandrina_HIv1___Sc0000010	3204209	3204630	422	184	81	0.021739130434782608	-	CUAGUACAAACAACGAUCGAGUGGCCAUU	24	9	139	7	5	9	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3204723-3205723	Cluster_3596	Pocillopora_meandrina_HIv1___Sc0000010	3204723	3205723	1001	1416	270	0.16242937853107345	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	219	11	1369	4	4	20	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3227596-3228005	Cluster_3597	Pocillopora_meandrina_HIv1___Sc0000010	3227596	3228005	410	179	73	0.16759776536312848	-	UCGUUUAGAUCAGAGAUCACCUCAACU	20	2	157	2	2	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3259368-3259782	Cluster_3598	Pocillopora_meandrina_HIv1___Sc0000010	3259368	3259782	415	137	39	1.0	+	GACGAAUCGUGCGGCG	27	112	18	2	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3263504-3263915	Cluster_3599	Pocillopora_meandrina_HIv1___Sc0000010	3263504	3263915	412	168	109	0.011904761904761904	-	AGAAAGCUCUGAGGAACACU	10	56	54	10	21	16	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3368202-3369096	Cluster_3600	Pocillopora_meandrina_HIv1___Sc0000010	3368202	3369096	895	445	140	0.23820224719101124	.	UUUCAAACUAAGGAAGGAGAAAGGGAUA	79	16	323	9	4	12	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3369865-3370294	Cluster_3601	Pocillopora_meandrina_HIv1___Sc0000010	3369865	3370294	430	673	71	0.0014858841010401188	-	UGAAGAUGGAAUCAAGAAAUGCAAAAC	331	15	595	4	28	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3374263-3374687	Cluster_3602	Pocillopora_meandrina_HIv1___Sc0000010	3374263	3374687	425	176	75	0.005681818181818182	-	GAUUCUGGUAGCGUUUUUAAGUGCGA	21	7	148	0	3	4	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3388834-3389259	Cluster_3603	Pocillopora_meandrina_HIv1___Sc0000010	3388834	3389259	426	333	168	0.36036036036036034	.	UUAAAAAGACGAGCUCGACA	19	209	0	105	13	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3398302-3399259	Cluster_3604	Pocillopora_meandrina_HIv1___Sc0000010	3398302	3399259	958	994	221	0.04627766599597585	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	217	19	946	0	3	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3411199-3411966	Cluster_3605	Pocillopora_meandrina_HIv1___Sc0000010	3411199	3411966	768	691	130	0.9985528219971056	+	UGCAAAAUCGACUCCGAUAACCUCAAAUGG	147	1	687	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3413718-3414142	Cluster_3606	Pocillopora_meandrina_HIv1___Sc0000010	3413718	3414142	425	221	109	0.9592760180995475	+	UCAUCUACAGUCGCAGUUUCAACUUCUAGU	21	1	212	0	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3415285-3416188	Cluster_3607	Pocillopora_meandrina_HIv1___Sc0000010	3415285	3416188	904	1043	326	0.9204218600191755	+	UUGGCGUAGUUUCGUUUGCGUGAAAUGUU	127	8	988	10	6	10	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3416833-3417250	Cluster_3608	Pocillopora_meandrina_HIv1___Sc0000010	3416833	3417250	418	73	29	0.0	-	AUUGAAAACGAUCUCGGGCGCCCAGAACA	14	0	70	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3540996-3541397	Cluster_3609	Pocillopora_meandrina_HIv1___Sc0000010	3540996	3541397	402	264	190	0.022727272727272728	-	GGAACGGCGUGAACU	7	120	67	27	11	17	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3564125-3564539	Cluster_3610	Pocillopora_meandrina_HIv1___Sc0000010	3564125	3564539	415	219	4	0.0	-	AGGAGAACGUAGGGU	216	218	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3644374-3644993	Cluster_3611	Pocillopora_meandrina_HIv1___Sc0000010	3644374	3644993	620	327	133	0.039755351681957186	-	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	49	2	317	1	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3658432-3658849	Cluster_3612	Pocillopora_meandrina_HIv1___Sc0000010	3658432	3658849	418	118	29	0.8728813559322034	+	CUUUCUGGAGUUAAGGUU	63	109	6	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3676348-3676967	Cluster_3613	Pocillopora_meandrina_HIv1___Sc0000010	3676348	3676967	620	328	127	0.027439024390243903	-	UGAUAAUGUUUGAAAGCUGUCGCUGUUC	63	0	319	0	2	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3698796-3699196	Cluster_3614	Pocillopora_meandrina_HIv1___Sc0000010	3698796	3699196	401	119	71	0.8067226890756303	+	UUUGUGGGUAUUCAAAGUGGUAAAUGUA	7	3	107	1	4	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3712931-3713345	Cluster_3615	Pocillopora_meandrina_HIv1___Sc0000010	3712931	3713345	415	163	73	0.4723926380368098	.	CGCUGGGGCUCUGCC	66	113	26	8	3	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3747752-3748576	Cluster_3616	Pocillopora_meandrina_HIv1___Sc0000010	3747752	3748576	825	2565	657	0.8491228070175438	+	UUAUCAACAGUACGGUUUGACUUGAAUC	261	34	2412	12	28	19	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:3940413-3940841	Cluster_3617	Pocillopora_meandrina_HIv1___Sc0000010	3940413	3940841	429	140	23	0.9857142857142858	+	UGAGUCAAGAUUUGCUUCCACCUGAAGGC	55	3	134	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4074115-4074529	Cluster_3618	Pocillopora_meandrina_HIv1___Sc0000010	4074115	4074529	415	257	12	0.007782101167315175	-	CUUUCCGGGGUCGCG	213	257	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4088544-4088984	Cluster_3619	Pocillopora_meandrina_HIv1___Sc0000010	4088544	4088984	441	2422	211	0.9888521882741536	+	UGCUGAAAAUCUGGACUUCUCGUAGAGC	646	11	2352	0	0	48	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4179325-4179739	Cluster_3620	Pocillopora_meandrina_HIv1___Sc0000010	4179325	4179739	415	84	30	0.0	-	AGGAUUGGCUCUGAGG	12	81	0	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4250290-4250696	Cluster_3621	Pocillopora_meandrina_HIv1___Sc0000010	4250290	4250696	407	80	33	0.9125	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	29	1	79	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4358728-4359158	Cluster_3622	Pocillopora_meandrina_HIv1___Sc0000010	4358728	4359158	431	485	142	0.9030927835051547	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	111	14	449	1	0	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4359765-4360165	Cluster_3623	Pocillopora_meandrina_HIv1___Sc0000010	4359765	4360165	401	206	121	0.8980582524271845	+	UAGAGACUUUAAGUACUGGAAAUACUU	19	5	187	3	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4480456-4481231	Cluster_3624	Pocillopora_meandrina_HIv1___Sc0000010	4480456	4481231	776	1201	245	0.33222314737718567	.	UCACCAUGAAAAGACUCUGGGCCAAAG	109	8	1128	1	4	18	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4481708-4482146	Cluster_3625	Pocillopora_meandrina_HIv1___Sc0000010	4481708	4482146	439	251	48	0.3187250996015936	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	79	8	236	2	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4482895-4483325	Cluster_3626	Pocillopora_meandrina_HIv1___Sc0000010	4482895	4483325	431	1447	155	0.967519004837595	+	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	392	0	1431	6	5	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4483688-4484591	Cluster_3627	Pocillopora_meandrina_HIv1___Sc0000010	4483688	4484591	904	1087	267	0.609935602575897	.	UAAGGAAAGUCUUUUCUGGGGUCUCCAAA	335	18	1021	4	4	6	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4573143-4573559	Cluster_3628	Pocillopora_meandrina_HIv1___Sc0000010	4573143	4573559	417	116	59	0.9568965517241379	+	UAGAAUCUCUUCACCUAUAUGCAUCAU	22	2	110	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:4573776-4575017	Cluster_3629	Pocillopora_meandrina_HIv1___Sc0000010	4573776	4575017	1242	5901	907	0.800711743772242	+	UACUUGUCGAAGUCCUGGCCCUCUAGCC	672	45	4928	19	81	424	404	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5041260-5041673	Cluster_3630	Pocillopora_meandrina_HIv1___Sc0000010	5041260	5041673	414	74	28	0.013513513513513514	-	UGUAGAACUGUCCGCCCAG	13	40	11	17	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5046153-5046580	Cluster_3631	Pocillopora_meandrina_HIv1___Sc0000010	5046153	5046580	428	495	104	0.9515151515151515	+	UCGACGUCGAUAUCAACAUUCUUAAUGU	249	2	485	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5080307-5080730	Cluster_3632	Pocillopora_meandrina_HIv1___Sc0000010	5080307	5080730	424	135	71	0.9851851851851852	+	UGCACUACACAGCCUCAGACAUUG	12	17	78	4	5	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5112513-5112980	Cluster_3633	Pocillopora_meandrina_HIv1___Sc0000010	5112513	5112980	468	342	245	0.9970760233918129	+	GACGAAAGAAAGUUGUGGACGCA	6	133	101	21	27	35	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5121116-5121526	Cluster_3634	Pocillopora_meandrina_HIv1___Sc0000010	5121116	5121526	411	261	189	1.0	+	UGAUAACAUAAUCUGCGGCAUCACCUCUGU	11	83	116	15	13	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5169129-5169549	Cluster_3635	Pocillopora_meandrina_HIv1___Sc0000010	5169129	5169549	421	87	28	1.0	+	UGCCAGACCUCUUACAAACCUCU	26	8	2	8	16	50	3	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5177648-5178064	Cluster_3636	Pocillopora_meandrina_HIv1___Sc0000010	5177648	5178064	417	143	18	1.0	+	AAGGAGUGUGUAACAA	39	143	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5184027-5184454	Cluster_3637	Pocillopora_meandrina_HIv1___Sc0000010	5184027	5184454	428	195	79	0.010256410256410256	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	36	2	187	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5194392-5194808	Cluster_3638	Pocillopora_meandrina_HIv1___Sc0000010	5194392	5194808	417	837	22	0.011947431302270013	-	UGGCCUGAAAAAAAAA	393	827	3	1	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5215689-5216107	Cluster_3639	Pocillopora_meandrina_HIv1___Sc0000010	5215689	5216107	419	225	150	0.0	-	ACGGAAAAGUCUGACACUGA	12	98	69	14	13	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5218834-5219247	Cluster_3640	Pocillopora_meandrina_HIv1___Sc0000010	5218834	5219247	414	218	164	0.009174311926605505	-	GGUGAUUGCUGACGGCUGUGCU	6	77	66	21	24	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5386984-5387412	Cluster_3641	Pocillopora_meandrina_HIv1___Sc0000010	5386984	5387412	429	100	25	0.03	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	36	0	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5454682-5455264	Cluster_3642	Pocillopora_meandrina_HIv1___Sc0000010	5454682	5455264	583	3266	424	0.42345376607470914	.	UGUAUGGCAAAGUUCUAAUAUUAAAAAAUU	657	35	2078	129	26	265	733	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5456216-5456935	Cluster_3643	Pocillopora_meandrina_HIv1___Sc0000010	5456216	5456935	720	474	161	0.7341772151898734	.	UGAUGCAAUCUGUUUCUGCAUGAGGGC	55	2	415	6	6	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5463919-5464391	Cluster_3644	Pocillopora_meandrina_HIv1___Sc0000010	5463919	5464391	473	241	129	0.6846473029045643	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	14	10	208	1	3	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5464715-5465144	Cluster_3645	Pocillopora_meandrina_HIv1___Sc0000010	5464715	5465144	430	128	45	0.9453125	+	AGUUGACAUAUUGACUGGUACAAACAAGGA	66	7	107	4	6	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5487259-5487684	Cluster_3646	Pocillopora_meandrina_HIv1___Sc0000010	5487259	5487684	426	263	32	0.9619771863117871	+	GUCCGUCCUAAAGGAAACCCCUGCAA	109	10	243	2	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5840138-5840633	Cluster_3647	Pocillopora_meandrina_HIv1___Sc0000010	5840138	5840633	496	559	67	0.0	-	CGUUACUGUUUGUCUGUAAGGGACGUGAU	89	1	557	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5846253-5846678	Cluster_3648	Pocillopora_meandrina_HIv1___Sc0000010	5846253	5846678	426	188	42	0.10106382978723404	-	AGGGACUGAAACAUCGACUGAAGACG	59	2	154	5	0	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5905579-5906074	Cluster_3649	Pocillopora_meandrina_HIv1___Sc0000010	5905579	5906074	496	528	80	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	64	0	521	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:5952667-5953092	Cluster_3650	Pocillopora_meandrina_HIv1___Sc0000010	5952667	5953092	426	145	44	0.034482758620689655	-	UCUUGCUUUGGGCUAAUGAUAAGACAU	33	2	101	16	4	3	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6015149-6015576	Cluster_3651	Pocillopora_meandrina_HIv1___Sc0000010	6015149	6015576	428	199	58	0.9346733668341709	+	UUAGAGAAUGCAAACCCAAUUUGGACGG	53	3	182	0	6	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6072176-6072604	Cluster_3652	Pocillopora_meandrina_HIv1___Sc0000010	6072176	6072604	429	355	62	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	77	0	355	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6130485-6130913	Cluster_3653	Pocillopora_meandrina_HIv1___Sc0000010	6130485	6130913	429	367	55	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	69	0	365	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6186986-6187481	Cluster_3654	Pocillopora_meandrina_HIv1___Sc0000010	6186986	6187481	496	495	74	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	65	2	485	0	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6239131-6239626	Cluster_3655	Pocillopora_meandrina_HIv1___Sc0000010	6239131	6239626	496	571	68	0.0	-	CGUUACUGUUUGUCUGUAAGGGACGUGAU	75	1	568	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6359214-6359709	Cluster_3656	Pocillopora_meandrina_HIv1___Sc0000010	6359214	6359709	496	397	77	0.0	-	UCUUGCUUUGGGCUAAUGUUAAGACGUGU	59	4	386	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6433080-6433698	Cluster_3657	Pocillopora_meandrina_HIv1___Sc0000010	6433080	6433698	619	499	277	0.11222444889779559	-	UAAUGCUUAGUAAUGUCGACACACGAACUA	27	12	463	4	8	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6434403-6434829	Cluster_3658	Pocillopora_meandrina_HIv1___Sc0000010	6434403	6434829	427	230	112	0.1956521739130435	-	UGCGUACUUUGUUUGGCUUCACUAUGGC	31	2	205	1	2	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6435310-6435744	Cluster_3659	Pocillopora_meandrina_HIv1___Sc0000010	6435310	6435744	435	371	125	0.018867924528301886	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	48	3	358	3	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6435820-6436243	Cluster_3660	Pocillopora_meandrina_HIv1___Sc0000010	6435820	6436243	424	148	69	0.08783783783783784	-	UAUGUGAUCGGUGAAUUUGCUUCAACA	16	0	142	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6436834-6437255	Cluster_3661	Pocillopora_meandrina_HIv1___Sc0000010	6436834	6437255	422	129	69	0.06976744186046512	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	11	0	120	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6468262-6468688	Cluster_3662	Pocillopora_meandrina_HIv1___Sc0000010	6468262	6468688	427	208	114	0.14903846153846154	-	AGUUGACAUAUGGACUGGUACAAACAAGGG	11	16	136	13	8	13	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6504286-6504781	Cluster_3663	Pocillopora_meandrina_HIv1___Sc0000010	6504286	6504781	496	481	62	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUGU	67	1	480	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6531965-6533590	Cluster_3664	Pocillopora_meandrina_HIv1___Sc0000010	6531965	6533590	1626	4367	1069	0.7352873826425463	.	UGUGAAUUUUUGGAUCAUUGGUUGUGUU	141	54	3822	70	37	128	256	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6564274-6564702	Cluster_3665	Pocillopora_meandrina_HIv1___Sc0000010	6564274	6564702	429	344	46	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	70	1	342	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6635003-6635431	Cluster_3666	Pocillopora_meandrina_HIv1___Sc0000010	6635003	6635431	429	416	65	0.0	-	UCUUGCUUUGGGCUAAUGAUAAGACGUG	71	1	415	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6696554-6697112	Cluster_3667	Pocillopora_meandrina_HIv1___Sc0000010	6696554	6697112	559	661	107	0.9773071104387292	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	170	1	651	2	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6735764-6736193	Cluster_3668	Pocillopora_meandrina_HIv1___Sc0000010	6735764	6736193	430	224	58	0.06696428571428571	-	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	45	1	216	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6740567-6740994	Cluster_3669	Pocillopora_meandrina_HIv1___Sc0000010	6740567	6740994	428	183	71	0.10382513661202186	-	ACAAGCGAUAUGUGGACCUUGAUCUGCGA	31	1	177	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6741198-6741626	Cluster_3670	Pocillopora_meandrina_HIv1___Sc0000010	6741198	6741626	429	212	74	0.018867924528301886	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	75	1	195	0	1	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6796012-6796439	Cluster_3671	Pocillopora_meandrina_HIv1___Sc0000010	6796012	6796439	428	273	34	0.9926739926739927	+	AGUGACUGAAAAAAAAAAAAAAAAA	37	12	192	10	18	21	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6844842-6845266	Cluster_3672	Pocillopora_meandrina_HIv1___Sc0000010	6844842	6845266	425	90	41	0.9777777777777777	+	UGUGUAGAUAUGUCUUUUGGACAGGA	25	0	88	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:6995127-6995546	Cluster_3673	Pocillopora_meandrina_HIv1___Sc0000010	6995127	6995546	420	2064	99	0.00048449612403100775	-	GUAGUCGUGGCCGAGUGG	672	2035	7	8	2	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7063587-7064016	Cluster_3674	Pocillopora_meandrina_HIv1___Sc0000010	7063587	7064016	430	257	90	0.027237354085603113	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGC	22	1	241	0	2	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7067135-7067630	Cluster_3675	Pocillopora_meandrina_HIv1___Sc0000010	7067135	7067630	496	487	81	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	73	0	487	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7121699-7122127	Cluster_3676	Pocillopora_meandrina_HIv1___Sc0000010	7121699	7122127	429	413	51	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	81	0	409	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7142086-7142786	Cluster_3677	Pocillopora_meandrina_HIv1___Sc0000010	7142086	7142786	701	591	201	0.19289340101522842	-	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	108	20	541	3	2	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7181896-7182325	Cluster_3678	Pocillopora_meandrina_HIv1___Sc0000010	7181896	7182325	430	995	129	0.0371859296482412	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGU	350	4	963	2	17	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7188769-7189197	Cluster_3679	Pocillopora_meandrina_HIv1___Sc0000010	7188769	7189197	429	332	73	0.012048192771084338	-	UAGGACAACUGAGAAUCCACGUAGACUC	112	1	321	0	7	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7190894-7191322	Cluster_3680	Pocillopora_meandrina_HIv1___Sc0000010	7190894	7191322	429	384	54	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	67	0	383	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7239251-7239778	Cluster_3681	Pocillopora_meandrina_HIv1___Sc0000010	7239251	7239778	528	823	210	0.09234507897934387	-	UGAUAUAAAUGACAAAAAGUAAAGGGC	217	17	744	9	7	29	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7239839-7240261	Cluster_3682	Pocillopora_meandrina_HIv1___Sc0000010	7239839	7240261	423	131	52	0.03816793893129771	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	18	2	125	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7258053-7258481	Cluster_3683	Pocillopora_meandrina_HIv1___Sc0000010	7258053	7258481	429	367	46	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	92	0	365	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7364532-7364960	Cluster_3684	Pocillopora_meandrina_HIv1___Sc0000010	7364532	7364960	429	376	46	0.9946808510638298	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	74	2	373	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7435837-7436265	Cluster_3685	Pocillopora_meandrina_HIv1___Sc0000010	7435837	7436265	429	421	69	0.997624703087886	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	87	1	417	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7460500-7462030	Cluster_3686	Pocillopora_meandrina_HIv1___Sc0000010	7460500	7462030	1531	2027	725	0.9536260483473114	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	89	21	1872	8	12	78	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7462252-7462676	Cluster_3687	Pocillopora_meandrina_HIv1___Sc0000010	7462252	7462676	425	234	138	0.9786324786324786	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	28	4	219	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7463684-7464723	Cluster_3688	Pocillopora_meandrina_HIv1___Sc0000010	7463684	7464723	1040	3679	753	0.983419407447676	+	UCUGUCUGUAUUGUUUUGGACCACGAC	784	34	3569	14	6	28	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7464863-7466466	Cluster_3689	Pocillopora_meandrina_HIv1___Sc0000010	7464863	7466466	1604	1586	736	0.8808322824716267	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	98	19	1456	7	10	20	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7500043-7500465	Cluster_3690	Pocillopora_meandrina_HIv1___Sc0000010	7500043	7500465	423	191	54	0.6335078534031413	.	CAAGUUGUAAAUUAUGGGUCGUG	52	3	109	0	3	54	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7535101-7535529	Cluster_3691	Pocillopora_meandrina_HIv1___Sc0000010	7535101	7535529	429	399	65	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	71	0	399	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7597297-7597855	Cluster_3692	Pocillopora_meandrina_HIv1___Sc0000010	7597297	7597855	559	569	109	0.029876977152899824	-	UGCAAACCCAAUUUGGACGGUUCAACUCC	198	0	565	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7604154-7604584	Cluster_3693	Pocillopora_meandrina_HIv1___Sc0000010	7604154	7604584	431	2928	131	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUGU	485	0	2925	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7665815-7666243	Cluster_3694	Pocillopora_meandrina_HIv1___Sc0000010	7665815	7666243	429	362	43	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	79	0	362	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7738519-7738947	Cluster_3695	Pocillopora_meandrina_HIv1___Sc0000010	7738519	7738947	429	394	53	1.0	+	UCUUGCUUUGGGCUAAUGAUAAGACGUG	68	0	394	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7900802-7901231	Cluster_3696	Pocillopora_meandrina_HIv1___Sc0000010	7900802	7901231	430	978	108	0.9979550102249489	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUA	553	11	887	2	3	8	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:7961220-7961634	Cluster_3697	Pocillopora_meandrina_HIv1___Sc0000010	7961220	7961634	415	94	15	0.9787234042553191	+	CCCUUAGAUGUUCUG	37	93	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8008738-8009160	Cluster_3698	Pocillopora_meandrina_HIv1___Sc0000010	8008738	8009160	423	1047	82	0.9646609360076409	+	UACUUAAAUGUUAUUGGUUUGU	351	14	38	1	557	414	23	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8010736-8011158	Cluster_3699	Pocillopora_meandrina_HIv1___Sc0000010	8010736	8011158	423	1665	113	0.9741741741741742	+	UACUUAAAUGUUAUUGGUUUGU	546	12	47	7	883	684	32	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8012916-8013008	Cluster_3700	Pocillopora_meandrina_HIv1___Sc0000010	8012916	8013008	93	26337	346	0.9903178038500968	+	UACUUCAAUGUUAUCGGUUUGU	7827	450	127	185	12765	11637	1173	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000010:8043324-8043739	Cluster_3701	Pocillopora_meandrina_HIv1___Sc0000010	8043324	8043739	416	99	14	0.020202020202020204	-	GUGUUUUUCGGUCUGU	85	93	4	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8076458-8077344	Cluster_3702	Pocillopora_meandrina_HIv1___Sc0000010	8076458	8077344	887	1491	334	0.31120053655264923	.	UUGUUACAAUGGAAUUCUCAUCUUCUAG	119	23	1410	7	2	28	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8149899-8150321	Cluster_3703	Pocillopora_meandrina_HIv1___Sc0000010	8149899	8150321	423	188	105	0.8776595744680851	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	19	1	174	2	2	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8262784-8263213	Cluster_3704	Pocillopora_meandrina_HIv1___Sc0000010	8262784	8263213	430	115	36	0.22608695652173913	.	UGCUUUGGACGAAAUUUCGAGGUUCACACU	56	7	87	15	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8395007-8395434	Cluster_3705	Pocillopora_meandrina_HIv1___Sc0000010	8395007	8395434	428	209	113	0.7990430622009569	.	UGAUCCGACGAAUAUUAUAAAUGUAAUAAA	14	1	197	0	2	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8396951-8397379	Cluster_3706	Pocillopora_meandrina_HIv1___Sc0000010	8396951	8397379	429	250	117	0.06	-	UAUUGACGAAUUUUCUGAGUACCUUGAAUC	18	1	246	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8397444-8397884	Cluster_3707	Pocillopora_meandrina_HIv1___Sc0000010	8397444	8397884	441	412	204	0.23300970873786409	.	UGCUCGCUCUAUUUCAAACAAAUCUGCACU	24	8	350	4	5	19	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8565038-8565455	Cluster_3708	Pocillopora_meandrina_HIv1___Sc0000010	8565038	8565455	418	132	61	0.0	-	GCGUUGGUGGUAUAGUGGU	31	105	14	2	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8566458-8566931	Cluster_3709	Pocillopora_meandrina_HIv1___Sc0000010	8566458	8566931	474	673	157	0.0014858841010401188	-	GCGUUGGUGGUAUAGUGGU	204	552	74	17	19	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8583914-8584344	Cluster_3710	Pocillopora_meandrina_HIv1___Sc0000010	8583914	8584344	431	309	192	0.4110032362459547	.	UUAACGGCUGUGUAGGAUAGAAUCGUCAACC	22	135	96	57	13	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8672504-8672930	Cluster_3711	Pocillopora_meandrina_HIv1___Sc0000010	8672504	8672930	427	180	29	0.005555555555555556	-	AUGCAUUGCCGAUAUUUACUUUAUUUG	83	2	168	2	7	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8752673-8753159	Cluster_3712	Pocillopora_meandrina_HIv1___Sc0000010	8752673	8753159	487	844	176	0.11729857819905214	-	AAGUUUUCCAACGACUCGUUUCUCUGCG	245	5	788	1	1	15	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8886490-8887042	Cluster_3713	Pocillopora_meandrina_HIv1___Sc0000010	8886490	8887042	553	783	344	0.020434227330779056	-	UGGCUGAGCUUCGCGUGUUU	37	257	227	105	58	75	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8891665-8892085	Cluster_3714	Pocillopora_meandrina_HIv1___Sc0000010	8891665	8892085	421	273	122	0.5970695970695971	.	AUUGUGCACCGUGUACCCUCU	42	107	13	124	20	9	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8902782-8903327	Cluster_3715	Pocillopora_meandrina_HIv1___Sc0000010	8902782	8903327	546	1327	519	0.0293896006028636	-	CGUACGCGCUCGUUGGCCCUC	94	449	190	376	91	134	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:8921529-8922238	Cluster_3716	Pocillopora_meandrina_HIv1___Sc0000010	8921529	8922238	710	897	235	0.9743589743589743	+	UGUAAGACUGACAAAGGCUAAGGUGAACAGC	102	9	851	2	4	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9015035-9015513	Cluster_3717	Pocillopora_meandrina_HIv1___Sc0000010	9015035	9015513	479	11405	1060	0.9979833406400701	+	AUCUAAUGAUGACAGCCUCAGU	2190	3089	1907	918	3670	1468	353	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9079066-9079545	Cluster_3718	Pocillopora_meandrina_HIv1___Sc0000010	9079066	9079545	480	1892	469	0.9989429175475687	+	AGGGAAUGACGAUAACCUUGGAGC	123	558	717	145	149	108	215	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9257329-9257858	Cluster_3719	Pocillopora_meandrina_HIv1___Sc0000010	9257329	9257858	530	7595	1338	0.00026333113890717575	-	GAGGCUACCUCUGACC	592	4349	2119	263	333	237	294	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9271372-9271788	Cluster_3720	Pocillopora_meandrina_HIv1___Sc0000010	9271372	9271788	417	1085	21	0.9990783410138249	+	UUUGUUCUAAGAUUUGC	470	1085	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9315058-9315482	Cluster_3721	Pocillopora_meandrina_HIv1___Sc0000010	9315058	9315482	425	705	108	1.0	+	UGCAAGCAUUAGUGGUGUGUCUCU	171	30	128	23	16	44	464	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9717806-9718228	Cluster_3722	Pocillopora_meandrina_HIv1___Sc0000010	9717806	9718228	423	169	58	0.0	-	GCGGUCUUUGAUUUACAAGUCU	21	25	57	1	45	13	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9759460-9759889	Cluster_3723	Pocillopora_meandrina_HIv1___Sc0000010	9759460	9759889	430	130	38	0.9923076923076923	+	ACUGAAGAAAAUUAUAGAAAGGCAACUGAG	43	6	123	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9776404-9776828	Cluster_3724	Pocillopora_meandrina_HIv1___Sc0000010	9776404	9776828	425	175	58	0.0	-	GUGGUCUUUGAUUUACAAGUCUGGU	50	14	99	3	15	23	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9834830-9835310	Cluster_3725	Pocillopora_meandrina_HIv1___Sc0000010	9834830	9835310	481	799	276	0.9987484355444305	+	CUGAUAAAAGUCAUCAAAACCCUGAGAA	91	117	543	21	40	25	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9838086-9838501	Cluster_3726	Pocillopora_meandrina_HIv1___Sc0000010	9838086	9838501	416	140	18	0.0	-	AUAGAAUGAUGAUGCA	98	137	1	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9847650-9848069	Cluster_3727	Pocillopora_meandrina_HIv1___Sc0000010	9847650	9848069	420	178	23	0.05056179775280899	-	UCUUGAUGUUUGAGCUGAGC	75	166	2	8	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:9938591-9939013	Cluster_3728	Pocillopora_meandrina_HIv1___Sc0000010	9938591	9939013	423	180	35	0.9944444444444445	+	UUAUAAUUUACAAACUCUUCUUA	86	5	23	10	28	110	4	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10103315-10103786	Cluster_3729	Pocillopora_meandrina_HIv1___Sc0000010	10103315	10103786	472	13815	653	0.9994933043792978	+	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	2952	3132	10251	35	282	55	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10172945-10173373	Cluster_3730	Pocillopora_meandrina_HIv1___Sc0000010	10172945	10173373	429	137	45	0.7956204379562044	.	UCGAUUCCACCGAAAGAAAUAACCUGUGC	49	11	120	6	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10888007-10888893	Cluster_3731	Pocillopora_meandrina_HIv1___Sc0000010	10888007	10888893	887	1154	827	0.0034662045060658577	-	CAUUCUGUGCGCUUU	7	357	491	70	83	80	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:10889114-10889526	Cluster_3732	Pocillopora_meandrina_HIv1___Sc0000010	10889114	10889526	413	196	143	0.0	-	GAAGAUCAAGGAAACCAUGAAUACU	6	74	69	7	12	21	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11053919-11054459	Cluster_3733	Pocillopora_meandrina_HIv1___Sc0000010	11053919	11054459	541	995	307	0.0	-	GGUGCACUUGUGAAUGGAGCA	156	433	206	227	78	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11163945-11164388	Cluster_3734	Pocillopora_meandrina_HIv1___Sc0000010	11163945	11164388	444	380	127	0.002631578947368421	-	AUGGCUGAAUUUUACC	85	198	48	29	32	48	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11164832-11165249	Cluster_3735	Pocillopora_meandrina_HIv1___Sc0000010	11164832	11165249	418	231	115	0.0	-	UCAGCCUGAAAGAAAACU	48	161	49	5	5	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11196232-11196659	Cluster_3736	Pocillopora_meandrina_HIv1___Sc0000010	11196232	11196659	428	110	36	1.0	+	UGACAGCUCAUCGAUCAGAAAACAAAGA	28	0	109	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11199054-11199465	Cluster_3737	Pocillopora_meandrina_HIv1___Sc0000010	11199054	11199465	412	167	84	0.6167664670658682	.	UAAACCACGAGUGCUUGCGAAAUCGAUC	15	55	82	17	11	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000010:11584486-11584903	Cluster_3738	Pocillopora_meandrina_HIv1___Sc0000010	11584486	11584903	418	1892	46	1.0	+	AGCUGUGACCCUCGGGC	915	1892	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:204592-205006	Cluster_3739	Pocillopora_meandrina_HIv1___Sc0000011	204592	205006	415	1646	9	0.9981773997569866	+	GCGACUGCUGCCGGC	1612	1646	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:263839-264256	Cluster_3740	Pocillopora_meandrina_HIv1___Sc0000011	263839	264256	418	1486	48	0.005383580080753701	-	CGCUACUUUGACCUCAUA	584	1479	6	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:350050-350469	Cluster_3741	Pocillopora_meandrina_HIv1___Sc0000011	350050	350469	420	104	22	0.0673076923076923	-	UAGUGCUGAGUACUCUGAGCU	45	34	2	57	8	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:716133-716553	Cluster_3742	Pocillopora_meandrina_HIv1___Sc0000011	716133	716553	421	244	161	0.0	-	GGUGACUAAGACUGAGCAAGC	10	67	88	33	17	11	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:728442-728851	Cluster_3743	Pocillopora_meandrina_HIv1___Sc0000011	728442	728851	410	196	114	0.9795918367346939	+	UAACGAACUAUGACAGCAAGGGCCUCAC	16	3	190	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:736998-737412	Cluster_3744	Pocillopora_meandrina_HIv1___Sc0000011	736998	737412	415	93	8	0.010752688172043012	-	GAUGAGGCUCAUAAC	72	93	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:947640-948056	Cluster_3745	Pocillopora_meandrina_HIv1___Sc0000011	947640	948056	417	550	17	0.990909090909091	+	GCGGAUGUGGCGGAAU	324	549	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1136360-1136777	Cluster_3746	Pocillopora_meandrina_HIv1___Sc0000011	1136360	1136777	418	310	14	0.02258064516129032	-	UACCUGGUUGAUUCUGCA	179	307	0	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1205065-1205491	Cluster_3747	Pocillopora_meandrina_HIv1___Sc0000011	1205065	1205491	427	188	85	0.005319148936170213	-	UUUGAUUGACGUACGGUAUUUGAGACGC	19	7	175	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1284991-1285397	Cluster_3748	Pocillopora_meandrina_HIv1___Sc0000011	1284991	1285397	407	177	110	0.4350282485875706	.	UCGGGAUAUGUAGUUGCGUCA	12	97	12	60	5	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1293175-1293610	Cluster_3749	Pocillopora_meandrina_HIv1___Sc0000011	1293175	1293610	436	220	84	0.08181818181818182	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	34	0	200	0	2	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1294907-1295311	Cluster_3750	Pocillopora_meandrina_HIv1___Sc0000011	1294907	1295311	405	166	94	0.08433734939759036	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	24	1	156	1	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1295665-1296094	Cluster_3751	Pocillopora_meandrina_HIv1___Sc0000011	1295665	1296094	430	677	184	0.028064992614475627	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	173	2	660	0	6	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1313428-1313857	Cluster_3752	Pocillopora_meandrina_HIv1___Sc0000011	1313428	1313857	430	221	58	0.05429864253393665	-	AGACAAAACAAGAUUUUGAGAACUGCUUCA	60	4	204	0	2	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1416061-1417125	Cluster_3753	Pocillopora_meandrina_HIv1___Sc0000011	1416061	1417125	1065	1427	382	0.12263489838822705	-	UAUCCAUGGUACAAAAAUUCGACUCACA	138	13	1316	6	6	14	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1425934-1426348	Cluster_3754	Pocillopora_meandrina_HIv1___Sc0000011	1425934	1426348	415	98	14	1.0	+	CAAACGAAGCCGGACU	43	97	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1449371-1449822	Cluster_3755	Pocillopora_meandrina_HIv1___Sc0000011	1449371	1449822	452	320	136	0.29375	.	AGUUGACAUACUGACUGGUACAAAUAAUGGU	21	19	258	1	7	7	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1450350-1450779	Cluster_3756	Pocillopora_meandrina_HIv1___Sc0000011	1450350	1450779	430	719	59	0.019471488178025034	-	UGAAACUCUGAUCUGAAAAUAUUUUUAA	228	4	713	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1575633-1576050	Cluster_3757	Pocillopora_meandrina_HIv1___Sc0000011	1575633	1576050	418	274	13	0.9854014598540146	+	UACCCGGAGGAAAAGAAA	134	270	1	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:1922359-1922776	Cluster_3758	Pocillopora_meandrina_HIv1___Sc0000011	1922359	1922776	418	122	6	0.9836065573770492	+	GCUUUGCAUGGAACAAGG	111	121	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2021516-2021940	Cluster_3759	Pocillopora_meandrina_HIv1___Sc0000011	2021516	2021940	425	98	39	0.9591836734693877	+	UUCUGUGAUAUGGAGGUGCUAUCGUCCGU	22	8	85	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2022131-2022898	Cluster_3760	Pocillopora_meandrina_HIv1___Sc0000011	2022131	2022898	768	3858	217	0.06220839813374806	-	CUGGAAAUUUGACUUGCAUGUAGUGUGAUC	2043	32	3731	20	6	15	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2113956-2114378	Cluster_3761	Pocillopora_meandrina_HIv1___Sc0000011	2113956	2114378	423	164	97	0.0	-	AGAGGAAGAACGUGAACGAA	9	71	55	10	5	16	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2235135-2235748	Cluster_3762	Pocillopora_meandrina_HIv1___Sc0000011	2235135	2235748	614	1710	315	0.9567251461988304	+	UCAAAUACAACACCAAAAGAC	376	219	995	422	10	20	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2235755-2236277	Cluster_3763	Pocillopora_meandrina_HIv1___Sc0000011	2235755	2236277	523	557	270	0.8761220825852782	+	UUCGAACGAGCGUACGCAACGGUGUAUC	34	22	498	11	4	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2290352-2290769	Cluster_3764	Pocillopora_meandrina_HIv1___Sc0000011	2290352	2290769	418	291	35	0.024054982817869417	-	AUCCCUCCGGUGCCUCCC	97	282	4	3	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2464538-2464952	Cluster_3765	Pocillopora_meandrina_HIv1___Sc0000011	2464538	2464952	415	605	11	0.006611570247933884	-	CCGCGACUGCUGCCA	590	603	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2575797-2576978	Cluster_3766	Pocillopora_meandrina_HIv1___Sc0000011	2575797	2576978	1182	4411	445	0.7959646338698708	.	UCAGUCCAAGAUCAUUGAAGCCUCCCGUC	686	49	4227	52	5	32	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2595018-2595447	Cluster_3767	Pocillopora_meandrina_HIv1___Sc0000011	2595018	2595447	430	93	10	1.0	+	UUUGUGAUGAUUGUGGUCUUGCUACUGGUG	73	2	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2740916-2741333	Cluster_3768	Pocillopora_meandrina_HIv1___Sc0000011	2740916	2741333	418	1427	38	0.0	-	CUUUCCGAGGUCGCGGA	387	1426	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2863633-2864064	Cluster_3769	Pocillopora_meandrina_HIv1___Sc0000011	2863633	2864064	432	368	90	0.9429347826086957	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	58	1	367	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:2967607-2968021	Cluster_3770	Pocillopora_meandrina_HIv1___Sc0000011	2967607	2968021	415	128	4	0.0	-	CCGCGACUGCUGCCA	124	128	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3070672-3071108	Cluster_3771	Pocillopora_meandrina_HIv1___Sc0000011	3070672	3071108	437	304	106	0.993421052631579	+	UGAUCAUGCCGUCUGAUGCUAUGCCUUU	78	0	302	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3071247-3071764	Cluster_3772	Pocillopora_meandrina_HIv1___Sc0000011	3071247	3071764	518	4181	558	0.8918918918918919	+	UUGGACGCGUUGCUUGUCUGAACAAGGC	610	19	3848	25	13	140	136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3073868-3074297	Cluster_3773	Pocillopora_meandrina_HIv1___Sc0000011	3073868	3074297	430	156	40	0.9615384615384616	+	UGUACUGUGAACAUAGUGUUACCAACCAUU	77	0	154	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3101017-3101433	Cluster_3774	Pocillopora_meandrina_HIv1___Sc0000011	3101017	3101433	417	137	16	0.15328467153284672	-	AACCCGCAUCUCCACCA	77	137	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3164536-3165009	Cluster_3775	Pocillopora_meandrina_HIv1___Sc0000011	3164536	3165009	474	601	151	0.18302828618968386	-	AAGUAUCGAAACGAUCAAGAAGUAAGUC	127	7	572	1	4	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3260156-3260798	Cluster_3776	Pocillopora_meandrina_HIv1___Sc0000011	3260156	3260798	643	500	381	0.004	-	GCGAUCACUGGGGAAACAAGC	6	167	170	43	41	48	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3261970-3262587	Cluster_3777	Pocillopora_meandrina_HIv1___Sc0000011	3261970	3262587	618	596	423	0.013422818791946308	-	UGUGCCCUGAUGGUAAAACUGUAGAGUA	9	188	224	37	58	39	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3270260-3270678	Cluster_3778	Pocillopora_meandrina_HIv1___Sc0000011	3270260	3270678	419	320	236	0.003125	-	UAAUGAAACAGGACGACCAAGCG	7	134	82	40	14	25	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3341020-3341434	Cluster_3779	Pocillopora_meandrina_HIv1___Sc0000011	3341020	3341434	415	904	11	0.004424778761061947	-	UCUGGAGUCUCGGCC	853	904	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3422687-3423112	Cluster_3780	Pocillopora_meandrina_HIv1___Sc0000011	3422687	3423112	426	169	62	0.8875739644970414	+	UUUGUUAGGAGAGUCUGCAACUAAGC	26	3	155	3	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3431914-3432353	Cluster_3781	Pocillopora_meandrina_HIv1___Sc0000011	3431914	3432353	440	755	160	0.06887417218543046	-	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	122	9	719	5	3	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3437444-3437874	Cluster_3782	Pocillopora_meandrina_HIv1___Sc0000011	3437444	3437874	431	469	133	1.0	+	UGAUCUUUAAAGUGAAAUUCGCAGGACUUAA	118	46	419	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3478591-3478999	Cluster_3783	Pocillopora_meandrina_HIv1___Sc0000011	3478591	3478999	409	158	84	0.4240506329113924	.	ACUGGAUACAAAACUGCUCGAUGC	24	1	113	1	1	4	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3479394-3479821	Cluster_3784	Pocillopora_meandrina_HIv1___Sc0000011	3479394	3479821	428	226	102	0.035398230088495575	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	53	0	220	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3482219-3482714	Cluster_3785	Pocillopora_meandrina_HIv1___Sc0000011	3482219	3482714	496	1664	263	0.109375	-	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	149	12	1614	21	1	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3487323-3487892	Cluster_3786	Pocillopora_meandrina_HIv1___Sc0000011	3487323	3487892	570	371	130	0.9973045822102425	+	UGAACCCGCGUCUGUCGUGCUACCAAGAUA	37	13	348	0	2	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3488573-3488991	Cluster_3787	Pocillopora_meandrina_HIv1___Sc0000011	3488573	3488991	419	117	45	1.0	+	UGUGCAUUGCAACAUCUGCUAGAUCCUUUGC	35	3	112	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3680928-3681467	Cluster_3788	Pocillopora_meandrina_HIv1___Sc0000011	3680928	3681467	540	459	201	0.10239651416122005	-	UUAAACCGACUCACAGUCCGAUUCGAAU	40	3	426	6	3	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3697531-3697936	Cluster_3789	Pocillopora_meandrina_HIv1___Sc0000011	3697531	3697936	406	236	171	0.9957627118644068	+	AUAUUGCAUAGCGCUCACUGAGUA	6	92	69	21	9	23	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3698609-3699028	Cluster_3790	Pocillopora_meandrina_HIv1___Sc0000011	3698609	3699028	420	230	142	0.9956521739130435	+	AAAAGAAUGGGACUUAUU	9	71	92	24	15	21	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3706024-3706443	Cluster_3791	Pocillopora_meandrina_HIv1___Sc0000011	3706024	3706443	420	280	189	0.9964285714285714	+	CGUGAUCUAGAUGCGUGAUUCGGGGAU	15	106	85	28	17	16	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3706668-3707242	Cluster_3792	Pocillopora_meandrina_HIv1___Sc0000011	3706668	3707242	575	396	273	0.9974747474747475	+	CAUCGAAAAGAAUGGGACUUAUU	11	116	136	32	29	40	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3743749-3744169	Cluster_3793	Pocillopora_meandrina_HIv1___Sc0000011	3743749	3744169	421	198	141	1.0	+	GACGUGGUUCGACAACUGAGAGAAU	9	68	85	6	19	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3749236-3749651	Cluster_3794	Pocillopora_meandrina_HIv1___Sc0000011	3749236	3749651	416	106	22	0.14150943396226415	-	GCGGGAAUAGCUCAGC	78	95	3	2	1	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3781168-3781585	Cluster_3795	Pocillopora_meandrina_HIv1___Sc0000011	3781168	3781585	418	157	21	0.050955414012738856	-	ACUCGGCCGUGGAUUGGA	36	153	1	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3851657-3852086	Cluster_3796	Pocillopora_meandrina_HIv1___Sc0000011	3851657	3852086	430	502	139	0.1294820717131474	-	UUGGAUAAUUUUGACGAAACCAGAGACA	171	3	453	2	8	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3852351-3852895	Cluster_3797	Pocillopora_meandrina_HIv1___Sc0000011	3852351	3852895	545	351	148	0.9316239316239316	+	AGUUUGCUGAUUUCCUGGUGCUUUGCGA	32	9	289	2	1	13	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3853490-3854313	Cluster_3798	Pocillopora_meandrina_HIv1___Sc0000011	3853490	3854313	824	903	364	0.49280177187153934	.	ACAGGAAGUACAACCACAGA	90	139	714	8	11	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:3855303-3855819	Cluster_3799	Pocillopora_meandrina_HIv1___Sc0000011	3855303	3855819	517	327	157	0.3058103975535168	.	UGAAUGGGUCUUUCCAAAACUGAUGGGG	15	13	272	1	9	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4137651-4138080	Cluster_3800	Pocillopora_meandrina_HIv1___Sc0000011	4137651	4138080	430	538	48	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUCG	205	0	535	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4143432-4143861	Cluster_3801	Pocillopora_meandrina_HIv1___Sc0000011	4143432	4143861	430	322	69	0.031055900621118012	-	UGAUCAAGUUUCCUAUCGCCUGUAAACACU	85	1	312	3	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4433355-4433903	Cluster_3802	Pocillopora_meandrina_HIv1___Sc0000011	4433355	4433903	549	465	345	1.0	+	CGAUCCUGAACUUUGCACUCA	8	169	148	39	34	49	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4435000-4435404	Cluster_3803	Pocillopora_meandrina_HIv1___Sc0000011	4435000	4435404	405	350	271	0.9914285714285714	+	AACUGACCGUGCCGUAUGCUGU	4	174	86	17	30	24	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4435430-4435847	Cluster_3804	Pocillopora_meandrina_HIv1___Sc0000011	4435430	4435847	418	276	165	1.0	+	UGUGCUGUGGGAUACU	13	168	41	20	23	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4543640-4544059	Cluster_3805	Pocillopora_meandrina_HIv1___Sc0000011	4543640	4544059	420	115	55	1.0	+	UUUCUGCUGGUUGGUGGAGCUCUGGCAGUU	21	29	62	9	7	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4551808-4552227	Cluster_3806	Pocillopora_meandrina_HIv1___Sc0000011	4551808	4552227	420	182	143	0.9945054945054945	+	GGAAACUCGACGUAAACGCU	5	73	59	6	25	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4630466-4630879	Cluster_3807	Pocillopora_meandrina_HIv1___Sc0000011	4630466	4630879	414	131	43	0.3511450381679389	.	CCGUGUUGUAGGCGC	33	109	15	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4710882-4711311	Cluster_3808	Pocillopora_meandrina_HIv1___Sc0000011	4710882	4711311	430	156	54	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	36	0	155	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4885882-4886715	Cluster_3809	Pocillopora_meandrina_HIv1___Sc0000011	4885882	4886715	834	692	82	0.9841040462427746	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	136	3	667	1	0	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4887264-4887693	Cluster_3810	Pocillopora_meandrina_HIv1___Sc0000011	4887264	4887693	430	254	79	0.9803149606299213	+	AUGGGUCUUAUUGAACAUUACAGAACAGCA	61	11	180	3	4	10	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4893406-4893823	Cluster_3811	Pocillopora_meandrina_HIv1___Sc0000011	4893406	4893823	418	133	67	0.9699248120300752	+	AGAGUUUUGAAGUAAAUCGGCGAAUCGUU	13	2	116	1	4	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:4940748-4941167	Cluster_3812	Pocillopora_meandrina_HIv1___Sc0000011	4940748	4941167	420	132	58	0.0	-	CCCUUAACAGCUUGUACUCUG	19	57	22	40	6	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5063660-5064076	Cluster_3813	Pocillopora_meandrina_HIv1___Sc0000011	5063660	5064076	417	274	38	0.0	-	GAAGUCGGCAAAAUGG	47	274	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5215532-5215946	Cluster_3814	Pocillopora_meandrina_HIv1___Sc0000011	5215532	5215946	415	177	3	1.0	+	GCCGGUCGUUGGGGU	174	177	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5464958-5465391	Cluster_3815	Pocillopora_meandrina_HIv1___Sc0000011	5464958	5465391	434	324	88	0.012345679012345678	-	UGUGUUCUUUUCUUCUCGUGUAGAUCCG	46	1	298	16	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5608021-5608440	Cluster_3816	Pocillopora_meandrina_HIv1___Sc0000011	5608021	5608440	420	186	145	0.9838709677419355	+	AGGGCUGAAGCGACAGAGU	6	67	71	17	17	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5682041-5682454	Cluster_3817	Pocillopora_meandrina_HIv1___Sc0000011	5682041	5682454	414	111	89	0.0	-	GAAAUGGCGGUAGGACUCCACAAGGGUCA	4	38	46	5	1	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5740299-5740769	Cluster_3818	Pocillopora_meandrina_HIv1___Sc0000011	5740299	5740769	471	2523	500	0.9996036464526358	+	CCCAAAUGAUGAGCAGAUU	188	828	1205	79	102	120	189	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5891753-5892167	Cluster_3819	Pocillopora_meandrina_HIv1___Sc0000011	5891753	5892167	415	87	9	0.9770114942528736	+	ACGGAGAACUCUUUUUUU	33	85	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5937066-5937486	Cluster_3820	Pocillopora_meandrina_HIv1___Sc0000011	5937066	5937486	421	272	134	0.33088235294117646	.	UCUUGACUCUUCUCGAUAUCCUCUAUGG	27	9	223	5	8	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5937633-5938061	Cluster_3821	Pocillopora_meandrina_HIv1___Sc0000011	5937633	5938061	429	163	33	0.012269938650306749	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	67	0	152	0	0	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:5952504-5952918	Cluster_3822	Pocillopora_meandrina_HIv1___Sc0000011	5952504	5952918	415	91	4	0.0	-	ACGACUGCUGCCGGC	71	91	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6046750-6047559	Cluster_3823	Pocillopora_meandrina_HIv1___Sc0000011	6046750	6047559	810	657	235	0.0547945205479452	-	UCGGUGUUUUCAAUGUUUAUCGGUUCGG	57	0	636	1	5	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6190043-6190464	Cluster_3824	Pocillopora_meandrina_HIv1___Sc0000011	6190043	6190464	422	127	33	0.84251968503937	+	AAUUGGUAAUGAGAAUAAUCUA	60	15	0	13	79	17	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6215869-6216344	Cluster_3825	Pocillopora_meandrina_HIv1___Sc0000011	6215869	6216344	476	1958	345	0.0015321756894790602	-	AGCCAGUGACGACUUAAUAUAUUCA	120	397	1374	27	41	47	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6216755-6217197	Cluster_3826	Pocillopora_meandrina_HIv1___Sc0000011	6216755	6217197	443	350	129	0.005714285714285714	-	CAAAAUUUCUGAGGCCA	52	174	104	11	8	22	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6217611-6218693	Cluster_3827	Pocillopora_meandrina_HIv1___Sc0000011	6217611	6218693	1083	6409	980	0.0003120611639881417	-	CACUCUGUGACUUGAUUAGAAAAUCU	473	1730	3112	355	500	400	312	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6218840-6219312	Cluster_3828	Pocillopora_meandrina_HIv1___Sc0000011	6218840	6219312	473	18419	1094	0.00016287529181823116	-	GUGUGUGAUGACUGCAUAGUUCAACUGAACA	4986	2974	11855	599	605	871	1515	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6219544-6220346	Cluster_3829	Pocillopora_meandrina_HIv1___Sc0000011	6219544	6220346	803	3562	813	0.0005614823133071309	-	GCACCUGAUGAAAUAACCUAUGACACA	144	712	2069	156	200	178	247	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6220823-6221301	Cluster_3830	Pocillopora_meandrina_HIv1___Sc0000011	6220823	6221301	479	1962	572	0.0005096839959225281	-	GAGAAUCAUGACUGUGUCAACUGAAGGUA	56	328	1067	115	177	156	119	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6222022-6222428	Cluster_3831	Pocillopora_meandrina_HIv1___Sc0000011	6222022	6222428	407	220	174	1.0	+	GAGAGUUUGAACUGUGUC	4	71	83	17	19	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6224058-6224472	Cluster_3832	Pocillopora_meandrina_HIv1___Sc0000011	6224058	6224472	415	285	221	0.9964912280701754	+	AAAAAGAGGGAGAAAAGAACAUCU	4	84	103	28	16	31	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6224564-6224977	Cluster_3833	Pocillopora_meandrina_HIv1___Sc0000011	6224564	6224977	414	289	203	0.9965397923875432	+	UUCUUUGAUGGAGAGGACUUCUCAGA	6	107	98	16	13	16	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6225961-6226391	Cluster_3834	Pocillopora_meandrina_HIv1___Sc0000011	6225961	6226391	431	413	265	1.0	+	GUGCUGCUAAUGGACAUGAAAC	16	147	123	20	48	36	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6274499-6274927	Cluster_3835	Pocillopora_meandrina_HIv1___Sc0000011	6274499	6274927	429	265	31	0.1811320754716981	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	150	2	261	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6322906-6323442	Cluster_3836	Pocillopora_meandrina_HIv1___Sc0000011	6322906	6323442	537	2649	496	0.636466591166478	.	AAGAGUGUUAUCUAUUUUAAUAAACUGAGU	476	28	2428	5	12	53	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6422647-6423063	Cluster_3837	Pocillopora_meandrina_HIv1___Sc0000011	6422647	6423063	417	352	29	0.005681818181818182	-	GAGAGGACUCUUUUU	61	351	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6464950-6465484	Cluster_3838	Pocillopora_meandrina_HIv1___Sc0000011	6464950	6465484	535	936	301	0.8728632478632479	+	GCCGGUAUUGGUGCA	46	661	62	124	32	39	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6473164-6473733	Cluster_3839	Pocillopora_meandrina_HIv1___Sc0000011	6473164	6473733	570	4969	705	0.9955725498088146	+	AGAAGCGGUAGGAUCUCCUGUUCG	905	1807	1299	463	204	203	993	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6476865-6477429	Cluster_3840	Pocillopora_meandrina_HIv1___Sc0000011	6476865	6477429	565	3839	1088	0.9885386819484241	+	GAGUAGGUGCACCGCUGACA	142	2048	562	381	434	221	193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6480865-6481343	Cluster_3841	Pocillopora_meandrina_HIv1___Sc0000011	6480865	6481343	479	816	385	0.9791666666666666	+	GUUACUGACGUAGGCUUGA	103	385	162	85	52	63	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6483576-6484155	Cluster_3842	Pocillopora_meandrina_HIv1___Sc0000011	6483576	6484155	580	1049	306	0.9923736892278361	+	AGAAAAGGUGCACCGCUGGCA	50	658	175	142	48	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6485782-6486366	Cluster_3843	Pocillopora_meandrina_HIv1___Sc0000011	6485782	6486366	585	5482	1169	0.9821233126596133	+	AAGUGAUCACCUGCCGUCA	1141	3759	853	347	178	195	150	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6489550-6490252	Cluster_3844	Pocillopora_meandrina_HIv1___Sc0000011	6489550	6490252	703	1904	637	0.993172268907563	+	GUGUUCGGCUUAUAAAACGUCAAGGU	111	833	501	245	94	99	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:6645201-6645716	Cluster_3845	Pocillopora_meandrina_HIv1___Sc0000011	6645201	6645716	516	238	81	0.3445378151260504	.	UUAGCGACGAGUGUUCUAUUUCCCUUCAGG	30	1	231	3	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7000730-7001147	Cluster_3846	Pocillopora_meandrina_HIv1___Sc0000011	7000730	7001147	418	204	15	0.9950980392156863	+	UUCUUGGAAUUGCAUGCC	101	202	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7091777-7092256	Cluster_3847	Pocillopora_meandrina_HIv1___Sc0000011	7091777	7092256	480	301	82	0.6245847176079734	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	102	7	245	2	4	22	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7092809-7093233	Cluster_3848	Pocillopora_meandrina_HIv1___Sc0000011	7092809	7093233	425	703	157	0.829302987197724	+	UGAAGUCGAGCUAGAAGAGGA	91	266	110	240	52	30	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7517305-7517727	Cluster_3849	Pocillopora_meandrina_HIv1___Sc0000011	7517305	7517727	423	93	19	1.0	+	AGUGGAGGCCUGUAAUUGCUGCUC	30	17	32	0	0	14	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7538618-7539082	Cluster_3850	Pocillopora_meandrina_HIv1___Sc0000011	7538618	7539082	465	728	218	0.012362637362637362	-	GGUAGCGUGGCCGAGU	98	617	39	15	27	21	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7637706-7638450	Cluster_3851	Pocillopora_meandrina_HIv1___Sc0000011	7637706	7638450	745	1283	785	0.003117692907248636	-	CCACGGUGAUUGGGGAUUAA	14	375	549	88	79	87	105	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7638532-7638933	Cluster_3852	Pocillopora_meandrina_HIv1___Sc0000011	7638532	7638933	402	184	144	0.005434782608695652	-	GACAGAACUGUUGAUCAGAAAGC	4	64	73	17	5	11	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7716508-7716924	Cluster_3853	Pocillopora_meandrina_HIv1___Sc0000011	7716508	7716924	417	116	12	1.0	+	GUGAAACUGCGAAUGGU	43	110	4	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7745411-7745825	Cluster_3854	Pocillopora_meandrina_HIv1___Sc0000011	7745411	7745825	415	139	13	1.0	+	GAGCCACCUCUGACC	88	139	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:7770864-7771293	Cluster_3855	Pocillopora_meandrina_HIv1___Sc0000011	7770864	7771293	430	381	28	0.0026246719160104987	-	CGUGUUUGGAUUACGAUCACCUGAAGCGU	205	3	378	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8011145-8011573	Cluster_3856	Pocillopora_meandrina_HIv1___Sc0000011	8011145	8011573	429	134	41	0.9925373134328358	+	AAACGAUUGAAUAGCAUAACUGAUG	16	1	132	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8012111-8013449	Cluster_3857	Pocillopora_meandrina_HIv1___Sc0000011	8012111	8013449	1339	1442	613	0.9063800277392511	+	UCCGUGACACAACGACUUUGCCUUGCUU	105	17	1368	4	8	16	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8276049-8276475	Cluster_3858	Pocillopora_meandrina_HIv1___Sc0000011	8276049	8276475	427	147	62	0.23129251700680273	.	UAACAGGAUCAACAAAGUGUCGAGCAGG	25	3	141	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8301205-8301621	Cluster_3859	Pocillopora_meandrina_HIv1___Sc0000011	8301205	8301621	417	376	28	0.9601063829787234	+	CCCCCGCAUCUCCACCA	209	376	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8316675-8317090	Cluster_3860	Pocillopora_meandrina_HIv1___Sc0000011	8316675	8317090	416	154	15	0.012987012987012988	-	GAGUGCGCUCUUAACC	98	153	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8412931-8413349	Cluster_3861	Pocillopora_meandrina_HIv1___Sc0000011	8412931	8413349	419	690	33	0.0	-	GGGGCUGUGGCUCAGUUGG	259	686	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8478554-8479134	Cluster_3862	Pocillopora_meandrina_HIv1___Sc0000011	8478554	8479134	581	1011	389	0.6251236399604352	.	CGUGUAAACAAGCGAUCUGUAAGA	108	37	737	17	15	32	173	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8490498-8491052	Cluster_3863	Pocillopora_meandrina_HIv1___Sc0000011	8490498	8491052	555	740	234	0.8959459459459459	+	UAGUAUAACUUUGAUCUGAUGAAAAUAAUC	276	9	684	1	11	10	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8492338-8492760	Cluster_3864	Pocillopora_meandrina_HIv1___Sc0000011	8492338	8492760	423	139	42	0.9856115107913669	+	UGAUAAUCAAAACGUCGGGCACAAGUCACU	49	0	125	2	2	10	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8494971-8496105	Cluster_3865	Pocillopora_meandrina_HIv1___Sc0000011	8494971	8496105	1135	7105	737	0.9496129486277269	+	UGAAAAAAUCUUCUGUUAUAAACACCUGA	1768	59	6706	23	19	89	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8499550-8500281	Cluster_3866	Pocillopora_meandrina_HIv1___Sc0000011	8499550	8500281	732	2028	260	0.8875739644970414	+	UGAGAAGAACUUCACUAACUUGACUAGUGA	926	10	1985	1	7	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8500386-8500808	Cluster_3867	Pocillopora_meandrina_HIv1___Sc0000011	8500386	8500808	423	175	68	0.68	.	UCAUCUCUAUUAUUGGGUCGCUUGU	26	1	164	0	1	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8534433-8535505	Cluster_3868	Pocillopora_meandrina_HIv1___Sc0000011	8534433	8535505	1073	949	296	0.136986301369863	-	UGCGCAAUCGUGAUCAAAAAUAUCCUC	83	5	899	1	2	15	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8559009-8559423	Cluster_3869	Pocillopora_meandrina_HIv1___Sc0000011	8559009	8559423	415	126	14	1.0	+	CGGAACUGGGCGUCA	81	125	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8580122-8580548	Cluster_3870	Pocillopora_meandrina_HIv1___Sc0000011	8580122	8580548	427	216	134	0.18981481481481483	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	21	2	196	2	0	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8581780-8582479	Cluster_3871	Pocillopora_meandrina_HIv1___Sc0000011	8581780	8582479	700	270	140	0.07407407407407407	-	UGUACUUUGUCUUUGUUGAAUUUGAUUC	20	3	258	1	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8622522-8623855	Cluster_3872	Pocillopora_meandrina_HIv1___Sc0000011	8622522	8623855	1334	2196	744	0.1762295081967213	-	UGGAUUACAAGUAAACACAACUGCCUGU	227	23	1932	10	15	129	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8632776-8633199	Cluster_3873	Pocillopora_meandrina_HIv1___Sc0000011	8632776	8633199	424	155	57	0.9161290322580645	+	UGGGUCGUAUUCCUAAAUCUUGAGCAA	20	18	119	1	1	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8759530-8759949	Cluster_3874	Pocillopora_meandrina_HIv1___Sc0000011	8759530	8759949	420	101	41	0.7326732673267327	.	UAUGCAUUGAACGGUAAGGGUAU	33	20	3	14	4	49	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8942245-8942671	Cluster_3875	Pocillopora_meandrina_HIv1___Sc0000011	8942245	8942671	427	771	86	0.05058365758754864	-	UUUCAAACUAAGGAAGGAGAAAGGGAU	165	13	412	13	36	39	258	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8943032-8943461	Cluster_3876	Pocillopora_meandrina_HIv1___Sc0000011	8943032	8943461	430	1433	94	0.9832519190509421	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	743	7	1414	2	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:8989633-8990060	Cluster_3877	Pocillopora_meandrina_HIv1___Sc0000011	8989633	8990060	428	83	31	0.012048192771084338	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	1	80	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9386857-9387285	Cluster_3878	Pocillopora_meandrina_HIv1___Sc0000011	9386857	9387285	429	2827	79	0.0	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2200	6	2816	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9569667-9570082	Cluster_3879	Pocillopora_meandrina_HIv1___Sc0000011	9569667	9570082	416	156	38	0.9102564102564102	+	CCCGUGUUGUAGGCGU	47	147	5	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9637998-9638410	Cluster_3880	Pocillopora_meandrina_HIv1___Sc0000011	9637998	9638410	413	160	96	0.0	-	UCCAGCUAUGUGAUCUGAACUGAAAAGUUU	33	35	93	7	10	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9680438-9680859	Cluster_3881	Pocillopora_meandrina_HIv1___Sc0000011	9680438	9680859	422	130	81	0.823076923076923	+	UAACACUAUAAACAUUCUGAGGGCGAUU	8	2	113	4	9	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9680873-9681301	Cluster_3882	Pocillopora_meandrina_HIv1___Sc0000011	9680873	9681301	429	185	94	0.8756756756756757	+	UAAUGAACGUAUAGCCAUCCAGUUGAACU	12	2	174	1	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9711846-9712793	Cluster_3883	Pocillopora_meandrina_HIv1___Sc0000011	9711846	9712793	948	2180	745	0.10412844036697248	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	178	23	2036	13	14	27	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9712795-9713663	Cluster_3884	Pocillopora_meandrina_HIv1___Sc0000011	9712795	9713663	869	572	273	0.07517482517482517	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	32	8	534	3	4	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9713864-9715859	Cluster_3885	Pocillopora_meandrina_HIv1___Sc0000011	9713864	9715859	1996	3397	1164	0.06829555490138357	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	195	32	3148	15	19	70	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9739955-9741132	Cluster_3886	Pocillopora_meandrina_HIv1___Sc0000011	9739955	9741132	1178	1310	492	0.09389312977099237	-	UGUCACUUUGCCGAUGGCUUGACUCGGG	92	8	1186	8	12	59	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9742190-9742888	Cluster_3887	Pocillopora_meandrina_HIv1___Sc0000011	9742190	9742888	699	664	239	0.03614457831325301	-	UAGGACGCUCUACUCCCUCAGCAGUACGGU	65	7	612	2	4	5	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9743274-9744734	Cluster_3888	Pocillopora_meandrina_HIv1___Sc0000011	9743274	9744734	1461	3051	798	0.011799410029498525	-	UGACUUUGUACAGGACUGGACCCGUUUGUUC	196	37	2941	15	9	21	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9747736-9748158	Cluster_3889	Pocillopora_meandrina_HIv1___Sc0000011	9747736	9748158	423	530	45	0.9886792452830189	+	UGACUGUCGGUCAACUGUCGGC	210	16	4	9	303	198	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9786853-9788785	Cluster_3890	Pocillopora_meandrina_HIv1___Sc0000011	9786853	9788785	1933	8162	1784	0.04631217838765009	-	UGUGUGGUUUUUGUAAGAACUAAAAAGUUC	1653	77	7897	26	28	39	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9789366-9791702	Cluster_3891	Pocillopora_meandrina_HIv1___Sc0000011	9789366	9791702	2337	5825	2103	0.8041201716738198	+	UCGUAGUAAACAUGGCUUCUUUUUAAAGA	199	143	5198	50	50	193	191	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9794039-9794468	Cluster_3892	Pocillopora_meandrina_HIv1___Sc0000011	9794039	9794468	430	146	21	0.03424657534246575	-	UGAGUAAACCUUCUUUUAAAUUUGAACAUU	61	0	146	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9794660-9795088	Cluster_3893	Pocillopora_meandrina_HIv1___Sc0000011	9794660	9795088	429	144	32	0.0	-	CACCAAAACAACGUAGCUCUUUUGCCAUC	82	0	143	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9806603-9807305	Cluster_3894	Pocillopora_meandrina_HIv1___Sc0000011	9806603	9807305	703	2630	313	0.7448669201520912	.	UGUGUUAGACUUUAACAGGAAAGAAGG	374	14	2581	7	7	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9808077-9808631	Cluster_3895	Pocillopora_meandrina_HIv1___Sc0000011	9808077	9808631	555	257	95	0.8287937743190662	+	UGGAAUGAAGUUUAUGCAGUCUGCUAGA	35	0	233	1	2	1	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9809549-9810654	Cluster_3896	Pocillopora_meandrina_HIv1___Sc0000011	9809549	9810654	1106	2491	486	0.9381774387796066	+	UGACUAUCAUCUGAAAGGGGCAAUUGGU	283	43	2356	9	21	31	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9825528-9826474	Cluster_3897	Pocillopora_meandrina_HIv1___Sc0000011	9825528	9826474	947	1098	413	0.14025500910746813	-	UCUGUCUCGUAUCAUCUCAUCUGUGAGC	76	22	977	10	27	12	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9826663-9827089	Cluster_3898	Pocillopora_meandrina_HIv1___Sc0000011	9826663	9827089	427	265	147	0.06415094339622641	-	UCUUCUCCUUGACUUCCUUUUGUAGAGU	32	9	245	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9828072-9828840	Cluster_3899	Pocillopora_meandrina_HIv1___Sc0000011	9828072	9828840	769	451	189	0.06651884700665188	-	UGAUUCAUCAGUAUUAAUGACUGUAGU	59	11	416	1	4	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9845259-9845688	Cluster_3900	Pocillopora_meandrina_HIv1___Sc0000011	9845259	9845688	430	213	80	0.004694835680751174	-	UAUUCAAAGUAAUCUCUGGAGAAGACUGGC	57	2	210	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9848383-9848810	Cluster_3901	Pocillopora_meandrina_HIv1___Sc0000011	9848383	9848810	428	295	102	0.01694915254237288	-	UCAACGGUGCCACUCUGGACUUUCCUGU	51	2	286	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9849209-9849638	Cluster_3902	Pocillopora_meandrina_HIv1___Sc0000011	9849209	9849638	430	193	53	0.0	-	UGAAUUUGACGUUUGACUGCCUUGUUCAGC	114	5	186	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9861493-9862035	Cluster_3903	Pocillopora_meandrina_HIv1___Sc0000011	9861493	9862035	543	1569	356	0.7724665391969407	.	GAAAGAAUUAGAGAAUGGGCGUCGCAGG	130	28	1013	27	41	116	344	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9869468-9869877	Cluster_3904	Pocillopora_meandrina_HIv1___Sc0000011	9869468	9869877	410	191	97	0.6492146596858639	.	UAAUAUCAGUUUCUGGUCAAGAUCAAGA	20	7	123	0	27	10	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9869941-9870465	Cluster_3905	Pocillopora_meandrina_HIv1___Sc0000011	9869941	9870465	525	539	223	0.922077922077922	+	UGAUAAAUACUCAAGCGACUCUCAAGAUUAG	42	2	473	2	0	6	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9874015-9875090	Cluster_3906	Pocillopora_meandrina_HIv1___Sc0000011	9874015	9875090	1076	574	204	0.0156794425087108	-	UGCUUCCAGGAAACAGGCAGAAAAUAUGC	97	17	545	2	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9876546-9876963	Cluster_3907	Pocillopora_meandrina_HIv1___Sc0000011	9876546	9876963	418	484	95	0.0	-	AUCCCACUUCUGACACCA	172	400	76	0	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9881650-9882549	Cluster_3908	Pocillopora_meandrina_HIv1___Sc0000011	9881650	9882549	900	823	382	0.02187120291616039	-	GACGAAGUGGCCGAA	46	78	715	5	5	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:9883183-9883608	Cluster_3909	Pocillopora_meandrina_HIv1___Sc0000011	9883183	9883608	426	177	88	0.005649717514124294	-	UGCAGAAUCCUGAGCAAUAUUGUCUU	37	3	166	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10009077-10009493	Cluster_3910	Pocillopora_meandrina_HIv1___Sc0000011	10009077	10009493	417	407	18	0.02702702702702703	-	AUCCGCUACUUUGACCA	295	396	5	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10071736-10072152	Cluster_3911	Pocillopora_meandrina_HIv1___Sc0000011	10071736	10072152	417	190	122	0.08947368421052632	-	AUGUGAAGCAAGGAUCAUGAAGACU	16	63	77	16	3	16	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10238980-10239401	Cluster_3912	Pocillopora_meandrina_HIv1___Sc0000011	10238980	10239401	422	172	45	0.9534883720930233	+	AUGAAAAUACGUAAUGCAGCUC	26	14	1	15	85	45	12	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10250224-10250643	Cluster_3913	Pocillopora_meandrina_HIv1___Sc0000011	10250224	10250643	420	1412	16	1.0	+	GAAGUUCUGGUUUAAAAAA	575	1410	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10323715-10326083	Cluster_3914	Pocillopora_meandrina_HIv1___Sc0000011	10323715	10326083	2369	18667	2784	0.9933036910055177	+	UGUGUAACUUAUCGUAUCCUGGUUGUCC	2652	155	18036	33	121	185	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10438249-10438800	Cluster_3915	Pocillopora_meandrina_HIv1___Sc0000011	10438249	10438800	552	414	289	0.9975845410628019	+	AACUUGUGAAUUAAUUGAAUGAUU	20	108	153	37	26	34	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000011:10442936-10443451	Cluster_3916	Pocillopora_meandrina_HIv1___Sc0000011	10442936	10443451	516	1052	265	0.10836501901140684	-	UAAGAUUCCAAGAUAUUUAAAACAAGU	98	13	921	3	8	11	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:125340-125768	Cluster_3917	Pocillopora_meandrina_HIv1___Sc0000012	125340	125768	429	243	101	0.07407407407407407	-	UGUGAAUCUUUUUACUCGUUAUGUUAAGUAG	25	9	225	5	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:127941-128369	Cluster_3918	Pocillopora_meandrina_HIv1___Sc0000012	127941	128369	429	117	21	0.9914529914529915	+	GUGCGAGAUAAGAUCUCUGAAGAUGACAGG	44	4	107	0	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:234590-235005	Cluster_3919	Pocillopora_meandrina_HIv1___Sc0000012	234590	235005	416	246	45	1.0	+	GAGUGUGCUCUUGACA	45	216	13	3	5	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:241083-241498	Cluster_3920	Pocillopora_meandrina_HIv1___Sc0000012	241083	241498	416	161	124	0.9875776397515528	+	AAAGAAAUGAUUGAUCUUGUUCUGGACA	8	52	73	6	12	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:429014-429511	Cluster_3921	Pocillopora_meandrina_HIv1___Sc0000012	429014	429511	498	736	111	0.005434782608695652	-	CGAUCCAACAAGAACAAUAUGUGCUUACUA	162	5	705	1	7	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:546164-546579	Cluster_3922	Pocillopora_meandrina_HIv1___Sc0000012	546164	546579	416	304	25	0.9967105263157895	+	ACACUCUGUCUCGUGA	99	303	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:564147-564561	Cluster_3923	Pocillopora_meandrina_HIv1___Sc0000012	564147	564561	415	183	31	1.0	+	ACGGUGGAUCUCUAG	94	180	1	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:694963-695392	Cluster_3924	Pocillopora_meandrina_HIv1___Sc0000012	694963	695392	430	489	92	0.9611451942740287	+	UGCGUAGCUCAACACGAUUUCGUCAAAGGA	92	8	471	0	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:782088-782502	Cluster_3925	Pocillopora_meandrina_HIv1___Sc0000012	782088	782502	415	98	11	1.0	+	CCCCGUGUUGUAGGCA	34	98	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:879107-879526	Cluster_3926	Pocillopora_meandrina_HIv1___Sc0000012	879107	879526	420	147	97	0.006802721088435374	-	UUAGACAGUAUGCUAAAGACA	5	48	56	12	4	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:927500-927927	Cluster_3927	Pocillopora_meandrina_HIv1___Sc0000012	927500	927927	428	127	38	0.984251968503937	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	33	5	96	0	2	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:934758-935175	Cluster_3928	Pocillopora_meandrina_HIv1___Sc0000012	934758	935175	418	190	22	0.04736842105263158	-	UUGAACUCGACCCUGUCA	132	183	3	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1062766-1063180	Cluster_3929	Pocillopora_meandrina_HIv1___Sc0000012	1062766	1063180	415	85	10	0.9764705882352941	+	CCGUGUUGUAGGCUG	39	84	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1127321-1127875	Cluster_3930	Pocillopora_meandrina_HIv1___Sc0000012	1127321	1127875	555	550	243	0.1	-	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	66	6	522	0	8	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1128453-1128965	Cluster_3931	Pocillopora_meandrina_HIv1___Sc0000012	1128453	1128965	513	205	99	0.024390243902439025	-	UCGUAUCGUUUGUUUCUUUCGCACAGA	18	3	197	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1129185-1129616	Cluster_3932	Pocillopora_meandrina_HIv1___Sc0000012	1129185	1129616	432	337	115	0.0712166172106825	-	UACGUGUAGAAAGCCUUCUCUGACAUC	35	3	315	2	2	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1381154-1381568	Cluster_3933	Pocillopora_meandrina_HIv1___Sc0000012	1381154	1381568	415	91	7	0.054945054945054944	-	GUGGAAGGUAGGUCC	84	89	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1495883-1496342	Cluster_3934	Pocillopora_meandrina_HIv1___Sc0000012	1495883	1496342	460	602	201	0.0	-	CAGACAGAUACGGAGCUUACAGAU	52	155	154	34	106	47	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1574026-1575119	Cluster_3935	Pocillopora_meandrina_HIv1___Sc0000012	1574026	1575119	1094	1248	477	0.9831730769230769	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	101	10	1206	6	5	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1575154-1575556	Cluster_3936	Pocillopora_meandrina_HIv1___Sc0000012	1575154	1575556	403	152	81	0.8947368421052632	+	UGGGAAUCCGAAUCGUGGUACAAAGUCA	22	3	140	1	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1575778-1576202	Cluster_3937	Pocillopora_meandrina_HIv1___Sc0000012	1575778	1576202	425	229	133	0.9606986899563319	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	27	6	207	1	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1576712-1577155	Cluster_3938	Pocillopora_meandrina_HIv1___Sc0000012	1576712	1577155	444	920	319	0.9478260869565217	+	UGUUGCUCAAAGGUCUUACUAUACACCA	75	72	757	49	25	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1577210-1578262	Cluster_3939	Pocillopora_meandrina_HIv1___Sc0000012	1577210	1578262	1053	1719	572	0.9691681210005817	+	UCUGUCUGUAUUGUUUUGGACCACGAC	151	30	1632	13	10	17	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1578389-1579986	Cluster_3940	Pocillopora_meandrina_HIv1___Sc0000012	1578389	1579986	1598	1996	920	0.8421843687374749	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	92	18	1808	17	13	46	94	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1700342-1700751	Cluster_3941	Pocillopora_meandrina_HIv1___Sc0000012	1700342	1700751	410	195	83	0.8153846153846154	+	UUUUGUAUCUGGAUUCCUUGACAUCU	17	8	171	1	4	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1720627-1721054	Cluster_3942	Pocillopora_meandrina_HIv1___Sc0000012	1720627	1721054	428	89	26	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	24	1	86	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1778902-1779366	Cluster_3943	Pocillopora_meandrina_HIv1___Sc0000012	1778902	1779366	465	976	254	0.8288934426229508	+	UCAUCAGUGAUCUCAGUUGAAUUGUAAACC	120	11	840	4	10	72	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1813691-1814109	Cluster_3944	Pocillopora_meandrina_HIv1___Sc0000012	1813691	1814109	419	233	14	0.017167381974248927	-	AACUUUUGACGGUGUCUAU	214	233	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:1967316-1967732	Cluster_3945	Pocillopora_meandrina_HIv1___Sc0000012	1967316	1967732	417	923	60	0.9989165763813651	+	UCUCGGCUCCGGACUG	231	923	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2183586-2184001	Cluster_3946	Pocillopora_meandrina_HIv1___Sc0000012	2183586	2184001	416	125	25	1.0	+	CGAACUAGACCCUGUU	24	122	1	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2208552-2208967	Cluster_3947	Pocillopora_meandrina_HIv1___Sc0000012	2208552	2208967	416	155	9	1.0	+	UGAGACUUGAAGCGGA	60	155	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2637211-2637903	Cluster_3948	Pocillopora_meandrina_HIv1___Sc0000012	2637211	2637903	693	1137	597	0.8988566402814424	+	CAUGUCUGUCUGAGC	30	482	335	87	81	73	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2701391-2701806	Cluster_3949	Pocillopora_meandrina_HIv1___Sc0000012	2701391	2701806	416	113	6	0.0	-	GCUGGAUGAUGAGACA	107	109	1	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2807434-2807851	Cluster_3950	Pocillopora_meandrina_HIv1___Sc0000012	2807434	2807851	418	131	24	0.9694656488549618	+	GAAACAUGCUCUGAGCUC	52	125	4	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2886188-2886621	Cluster_3951	Pocillopora_meandrina_HIv1___Sc0000012	2886188	2886621	434	1388	289	0.0	-	AUUAACUGAAGACACCUGUAACUCUGAAU	240	138	1006	17	115	57	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2886971-2887446	Cluster_3952	Pocillopora_meandrina_HIv1___Sc0000012	2886971	2887446	476	2252	340	0.0	-	UGGAAUGAUGAGUCACUCUUUGAUA	256	528	1421	158	86	19	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2889479-2889955	Cluster_3953	Pocillopora_meandrina_HIv1___Sc0000012	2889479	2889955	477	2325	380	0.0	-	UUAACUGAAGACACCUUUUACUCUGAAU	329	164	1797	47	157	67	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:2926923-2927342	Cluster_3954	Pocillopora_meandrina_HIv1___Sc0000012	2926923	2927342	420	159	56	0.18238993710691823	-	GGGCCUGUUUCGUGAAUCGC	37	108	11	25	10	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3012101-3012517	Cluster_3955	Pocillopora_meandrina_HIv1___Sc0000012	3012101	3012517	417	1135	103	0.014977973568281937	-	GCCCGGUUAGCUCAG	415	1098	19	4	9	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3102775-3103192	Cluster_3956	Pocillopora_meandrina_HIv1___Sc0000012	3102775	3103192	418	224	130	1.0	+	AGUGUUGCUGAACGAAAAAGGAA	11	80	80	19	21	16	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3291569-3291996	Cluster_3957	Pocillopora_meandrina_HIv1___Sc0000012	3291569	3291996	428	160	65	0.33125	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	39	1	144	1	1	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3295696-3296104	Cluster_3958	Pocillopora_meandrina_HIv1___Sc0000012	3295696	3296104	409	119	71	0.3445378151260504	.	UUAAAUCACAUUUACGCUGCAAUCUGG	7	3	95	1	0	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3301242-3301663	Cluster_3959	Pocillopora_meandrina_HIv1___Sc0000012	3301242	3301663	422	121	81	0.7851239669421488	.	UGACUUUAACACUAUAAACAUUCUGAGG	8	2	102	4	3	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3301677-3302104	Cluster_3960	Pocillopora_meandrina_HIv1___Sc0000012	3301677	3302104	428	175	97	0.8685714285714285	+	UAAUGAACGUAUAGCCAUCCAGUUGAACU	15	2	167	1	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3417269-3417874	Cluster_3961	Pocillopora_meandrina_HIv1___Sc0000012	3417269	3417874	606	789	152	0.9239543726235742	+	UGUGACAGCUCUUUUCCUCCUGCAAAGA	121	10	615	116	15	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3443230-3443876	Cluster_3962	Pocillopora_meandrina_HIv1___Sc0000012	3443230	3443876	647	745	309	0.11140939597315436	-	UGAAAUACUUGUUCUUUUCCCUGGUUUGCC	88	2	699	7	7	10	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3443902-3444331	Cluster_3963	Pocillopora_meandrina_HIv1___Sc0000012	3443902	3444331	430	677	71	0.0	-	UCAGCUCUUUCUAACUCUGCAAUUUGAGGU	269	0	675	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3549634-3550060	Cluster_3964	Pocillopora_meandrina_HIv1___Sc0000012	3549634	3550060	427	163	61	0.950920245398773	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	36	1	158	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3702104-3702532	Cluster_3965	Pocillopora_meandrina_HIv1___Sc0000012	3702104	3702532	429	89	23	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	24	0	88	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3728246-3728661	Cluster_3966	Pocillopora_meandrina_HIv1___Sc0000012	3728246	3728661	416	126	13	0.9841269841269841	+	AAGUGUGCUCUUAACC	56	126	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3841351-3841765	Cluster_3967	Pocillopora_meandrina_HIv1___Sc0000012	3841351	3841765	415	129	11	1.0	+	CUUCCCGAGGUCGCA	109	124	5	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:3943388-3943815	Cluster_3968	Pocillopora_meandrina_HIv1___Sc0000012	3943388	3943815	428	99	21	0.030303030303030304	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	30	0	98	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4244145-4244572	Cluster_3969	Pocillopora_meandrina_HIv1___Sc0000012	4244145	4244572	428	113	24	0.008849557522123894	-	GAAGAUUUCUUUGAGAUAGAUGUAGCACA	39	5	104	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4299145-4299601	Cluster_3970	Pocillopora_meandrina_HIv1___Sc0000012	4299145	4299601	457	2512	190	0.9996019108280255	+	UAUUUGUACAUCGCUGACUUGUUU	526	105	706	20	109	561	1011	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4477900-4478319	Cluster_3971	Pocillopora_meandrina_HIv1___Sc0000012	4477900	4478319	420	22704	111	0.0	-	AAUCGGCCGUGGAUU	11854	22704	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4527935-4528337	Cluster_3972	Pocillopora_meandrina_HIv1___Sc0000012	4527935	4528337	403	252	152	0.5753968253968254	.	UUCGCGUCUGAAGCUGUUAA	28	121	58	48	12	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4724333-4724835	Cluster_3973	Pocillopora_meandrina_HIv1___Sc0000012	4724333	4724835	503	400	173	0.99	+	UUCUACUGCUGUAACUUCAUGAAUACUGC	34	8	383	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4724871-4725617	Cluster_3974	Pocillopora_meandrina_HIv1___Sc0000012	4724871	4725617	747	681	276	0.9882525697503671	+	UAAGUGCUUUUUCCGACUAACUUUUCUGU	40	21	637	8	0	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4908638-4909067	Cluster_3975	Pocillopora_meandrina_HIv1___Sc0000012	4908638	4909067	430	302	42	0.006622516556291391	-	AUACUCUAGCAUUCAGACGGAAGAUUCGCU	123	18	276	4	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:4929534-4929950	Cluster_3976	Pocillopora_meandrina_HIv1___Sc0000012	4929534	4929950	417	148	18	0.9864864864864865	+	CGGCCUGAAAAAAAAAA	30	143	0	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5242362-5242790	Cluster_3977	Pocillopora_meandrina_HIv1___Sc0000012	5242362	5242790	429	120	33	1.0	+	UGCAUAUCUUGAACUAGUCGGUUGUGAUU	67	1	116	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5269393-5269873	Cluster_3978	Pocillopora_meandrina_HIv1___Sc0000012	5269393	5269873	481	694	393	0.01585014409221902	-	GUUCGAUUCCGGAGAGGGAGCCG	37	262	177	63	65	85	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5271160-5271578	Cluster_3979	Pocillopora_meandrina_HIv1___Sc0000012	5271160	5271578	419	136	36	0.9705882352941176	+	AACGAGACCUUGACCUGCU	34	133	1	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5275572-5276707	Cluster_3980	Pocillopora_meandrina_HIv1___Sc0000012	5275572	5276707	1136	13238	2498	0.0014352621241879439	-	CUAGUACUGUGAAACUGCGAAUGGCU	874	3357	5584	871	850	910	1666	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5279849-5281604	Cluster_3981	Pocillopora_meandrina_HIv1___Sc0000012	5279849	5281604	1756	1363405	26183	8.214727098697746e-05	-	CAGCUGUGACCCUCGGGU	216329	911825	287984	84201	43603	21828	13964	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5282066-5282632	Cluster_3982	Pocillopora_meandrina_HIv1___Sc0000012	5282066	5282632	567	1299	141	0.0731331793687452	-	UCAUUCACAUCCAUCUGUAAGAAUUUGC	215	6	1218	1	1	4	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5295733-5297102	Cluster_3983	Pocillopora_meandrina_HIv1___Sc0000012	5295733	5297102	1370	7006577	50326	3.0114562360479303e-05	-	CUCGGGCUGAGACUUGAAGCA	1177292	2534697	1060899	1901515	384320	1019582	105564	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5299291-5303737	Cluster_3984	Pocillopora_meandrina_HIv1___Sc0000012	5299291	5303737	4447	950649	83862	0.9995003413457543	+	AACUUUUGACGGUGGAUCU	17713	392151	326262	66213	60921	53421	51681	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5461911-5462332	Cluster_3985	Pocillopora_meandrina_HIv1___Sc0000012	5461911	5462332	422	86	31	0.9534883720930233	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	38	0	84	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5463579-5464005	Cluster_3986	Pocillopora_meandrina_HIv1___Sc0000012	5463579	5464005	427	238	136	0.8907563025210085	+	UGAGUCGAGGUUAUUCACAAUACGAGC	32	9	213	0	1	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5507240-5507668	Cluster_3987	Pocillopora_meandrina_HIv1___Sc0000012	5507240	5507668	429	568	51	0.9066901408450704	+	UCUUAUCGUAAUCAGCACCAAGUAGCAUA	366	0	559	0	1	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5578524-5578951	Cluster_3988	Pocillopora_meandrina_HIv1___Sc0000012	5578524	5578951	428	137	51	0.08759124087591241	-	AAGGAUACCACAUUCGGAAGUGUAAGAGA	44	7	123	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5579115-5579537	Cluster_3989	Pocillopora_meandrina_HIv1___Sc0000012	5579115	5579537	423	91	31	0.27472527472527475	.	UUGUACCGGUCCAUAUGUCAACUGUUG	19	1	88	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5605813-5606228	Cluster_3990	Pocillopora_meandrina_HIv1___Sc0000012	5605813	5606228	416	269	162	0.7992565055762082	.	UAUGACCGUUUGAAUCAGCACAUGUACGAGC	15	75	133	42	11	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5664282-5664696	Cluster_3991	Pocillopora_meandrina_HIv1___Sc0000012	5664282	5664696	415	155	19	0.0	-	CCGCGACUGCUGCCC	91	150	3	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5739796-5740216	Cluster_3992	Pocillopora_meandrina_HIv1___Sc0000012	5739796	5740216	421	520	44	1.0	+	CUCGGGCUGAGACUUGACGAG	109	406	0	114	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5764850-5765263	Cluster_3993	Pocillopora_meandrina_HIv1___Sc0000012	5764850	5765263	414	99	16	0.0	-	AGACUUGAAGCGGUA	19	98	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:5868872-5869338	Cluster_3994	Pocillopora_meandrina_HIv1___Sc0000012	5868872	5869338	467	219	105	0.9178082191780822	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	14	12	154	6	2	18	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6081718-6082147	Cluster_3995	Pocillopora_meandrina_HIv1___Sc0000012	6081718	6082147	430	163	70	0.03067484662576687	-	UUAUCGUCUACGUAUGUGUCUUUGGCUUGU	41	2	156	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6088634-6089061	Cluster_3996	Pocillopora_meandrina_HIv1___Sc0000012	6088634	6089061	428	123	26	0.983739837398374	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	33	1	122	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6098305-6100303	Cluster_3997	Pocillopora_meandrina_HIv1___Sc0000012	6098305	6100303	1999	3864	1365	0.10196687370600414	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	337	32	3625	19	25	46	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6100310-6100737	Cluster_3998	Pocillopora_meandrina_HIv1___Sc0000012	6100310	6100737	428	362	174	0.16298342541436464	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	56	5	335	1	0	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6100856-6101281	Cluster_3999	Pocillopora_meandrina_HIv1___Sc0000012	6100856	6101281	426	159	90	0.05660377358490566	-	UGAACUUCUCGGCUCCAAACACUAUGG	35	3	148	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6101298-6101728	Cluster_4000	Pocillopora_meandrina_HIv1___Sc0000012	6101298	6101728	431	493	198	0.05273833671399594	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	62	5	466	1	0	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6102014-6103188	Cluster_4001	Pocillopora_meandrina_HIv1___Sc0000012	6102014	6103188	1175	1372	574	0.10422740524781342	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	91	32	1207	4	19	45	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6137887-6138307	Cluster_4002	Pocillopora_meandrina_HIv1___Sc0000012	6137887	6138307	421	147	67	0.9523809523809523	+	UACUUAACGUUGGCAGUACUG	34	12	74	54	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6183151-6183691	Cluster_4003	Pocillopora_meandrina_HIv1___Sc0000012	6183151	6183691	541	596	160	0.23657718120805368	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	177	1	573	2	1	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6200813-6201228	Cluster_4004	Pocillopora_meandrina_HIv1___Sc0000012	6200813	6201228	416	150	18	0.04	-	UUACGAGGUCGCGGUC	80	149	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6212286-6212700	Cluster_4005	Pocillopora_meandrina_HIv1___Sc0000012	6212286	6212700	415	75	10	0.013333333333333334	-	CUCGUUGUGUGUGUGUA	30	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6342087-6342495	Cluster_4006	Pocillopora_meandrina_HIv1___Sc0000012	6342087	6342495	409	116	85	0.0	-	UAAGCAAAAACGAAUUCUAGUG	4	39	47	9	10	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6355105-6355520	Cluster_4007	Pocillopora_meandrina_HIv1___Sc0000012	6355105	6355520	416	183	14	0.9453551912568307	+	UCUGGAGUCUCGGAU	66	176	6	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6455183-6455276	Cluster_4008	Pocillopora_meandrina_HIv1___Sc0000012	6455183	6455276	94	2504	138	0.9996006389776357	+	UGAAAUACUCUGACGGAGUCAGC	1078	422	150	42	191	1412	287	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000012:6553869-6554283	Cluster_4009	Pocillopora_meandrina_HIv1___Sc0000012	6553869	6554283	415	169	8	1.0	+	UCCGCUGUAGUAUAG	148	161	8	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6591857-6592296	Cluster_4010	Pocillopora_meandrina_HIv1___Sc0000012	6591857	6592296	440	2331	180	0.001287001287001287	-	UCUGUUAGAAUGAAGAAAGGGACUCCGUC	396	30	2233	8	15	16	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6610946-6611372	Cluster_4011	Pocillopora_meandrina_HIv1___Sc0000012	6610946	6611372	427	190	55	0.33157894736842103	.	CGUGUUUGGAUUGCGAUCACCUGGAGCA	27	5	171	0	3	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6715855-6716293	Cluster_4012	Pocillopora_meandrina_HIv1___Sc0000012	6715855	6716293	439	404	118	0.29207920792079206	.	CAAGAAGUACAAGUGGU	50	114	288	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6743354-6743998	Cluster_4013	Pocillopora_meandrina_HIv1___Sc0000012	6743354	6743998	645	3445	526	0.23222060957910015	.	GUGAUUUUCAGUUCAGGACAAUGCAAUUUU	419	63	2729	17	40	83	513	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6750710-6751474	Cluster_4014	Pocillopora_meandrina_HIv1___Sc0000012	6750710	6751474	765	1542	217	0.3424124513618677	.	UGAGAAAAAUGUGACAUGAGAAAUUGAUU	551	57	1383	2	8	22	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6939591-6940020	Cluster_4015	Pocillopora_meandrina_HIv1___Sc0000012	6939591	6940020	430	404	43	0.0049504950495049506	-	AACUACUGCUCGUGCUCUAGAUAUGACG	146	23	379	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6963867-6964294	Cluster_4016	Pocillopora_meandrina_HIv1___Sc0000012	6963867	6964294	428	210	36	0.009523809523809525	-	AACUACUGCUCGUGCUCUAGAUAUGACA	96	7	202	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6972503-6972930	Cluster_4017	Pocillopora_meandrina_HIv1___Sc0000012	6972503	6972930	428	324	54	0.14814814814814814	-	AGGGACUGAAACAUCGACUGAAGACG	85	4	276	14	0	8	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:6988644-6989901	Cluster_4018	Pocillopora_meandrina_HIv1___Sc0000012	6988644	6989901	1258	5202	1381	0.2764321414840446	.	UGUUGUCGAUUAGCUUUGGUACACAGUU	196	72	4485	38	261	125	221	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7218635-7219064	Cluster_4019	Pocillopora_meandrina_HIv1___Sc0000012	7218635	7219064	430	167	58	0.023952095808383235	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	28	2	162	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7370061-7370475	Cluster_4020	Pocillopora_meandrina_HIv1___Sc0000012	7370061	7370475	415	111	11	0.9819819819819819	+	UUCCGAGGUCGAGGU	44	110	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7399945-7400360	Cluster_4021	Pocillopora_meandrina_HIv1___Sc0000012	7399945	7400360	416	762	16	0.006561679790026247	-	CUUGAAGCGGUUGGGU	705	758	3	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7535780-7536207	Cluster_4022	Pocillopora_meandrina_HIv1___Sc0000012	7535780	7536207	428	137	50	0.014598540145985401	-	UUUGAUCCGUCUUCGCAUGAAAUGCUGC	40	11	119	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7549463-7549893	Cluster_4023	Pocillopora_meandrina_HIv1___Sc0000012	7549463	7549893	431	2643	136	0.00037835792659856227	-	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	671	7	2628	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7554612-7555025	Cluster_4024	Pocillopora_meandrina_HIv1___Sc0000012	7554612	7555025	414	92	21	0.9456521739130435	+	UCCUCGGUAGCUCAGU	47	87	0	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7556170-7556578	Cluster_4025	Pocillopora_meandrina_HIv1___Sc0000012	7556170	7556578	409	108	65	0.9814814814814815	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	8	3	95	1	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7556645-7557690	Cluster_4026	Pocillopora_meandrina_HIv1___Sc0000012	7556645	7557690	1046	2593	768	0.9382954107211724	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	284	64	2390	13	33	38	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7557706-7559193	Cluster_4027	Pocillopora_meandrina_HIv1___Sc0000012	7557706	7559193	1488	3984	1339	0.8980923694779116	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	149	72	3536	15	34	165	162	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7660353-7660768	Cluster_4028	Pocillopora_meandrina_HIv1___Sc0000012	7660353	7660768	416	306	6	0.0	-	CCUGCCGGAACCACCA	154	306	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7917423-7917836	Cluster_4029	Pocillopora_meandrina_HIv1___Sc0000012	7917423	7917836	414	134	68	0.5373134328358209	.	UCUUGAUUCAAGUAGGCUUAACA	41	4	77	0	1	50	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7919105-7919763	Cluster_4030	Pocillopora_meandrina_HIv1___Sc0000012	7919105	7919763	659	1867	438	0.15050883770755222	-	UGUGUAGUUCUUCCUAAGACUUUCGUC	119	19	1701	21	11	30	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7920052-7920756	Cluster_4031	Pocillopora_meandrina_HIv1___Sc0000012	7920052	7920756	705	3689	525	0.059907834101382486	-	UGCAAUGGAUCUAGUACUAUCAAGUUC	900	46	3446	20	66	22	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7921185-7921614	Cluster_4032	Pocillopora_meandrina_HIv1___Sc0000012	7921185	7921614	430	755	135	0.9708609271523179	+	UAGUACUGGUGAUUUCUGUUAAUGGAAAU	144	4	700	7	15	14	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:7922225-7922758	Cluster_4033	Pocillopora_meandrina_HIv1___Sc0000012	7922225	7922758	534	5094	331	0.9925402434236357	+	UAAUAAAGGCAGUGUAUGAAGUUGAUUUC	2940	12	5004	11	14	19	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8079060-8079487	Cluster_4034	Pocillopora_meandrina_HIv1___Sc0000012	8079060	8079487	428	243	96	0.11522633744855967	-	UAUGACCGUUUGAAUCAGCCCAUGUACG	65	35	202	5	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8302325-8302754	Cluster_4035	Pocillopora_meandrina_HIv1___Sc0000012	8302325	8302754	430	102	19	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	51	1	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8477055-8477462	Cluster_4036	Pocillopora_meandrina_HIv1___Sc0000012	8477055	8477462	408	166	138	0.0	-	CGACUAGUGUGAGUA	5	62	59	11	9	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8490105-8490521	Cluster_4037	Pocillopora_meandrina_HIv1___Sc0000012	8490105	8490521	417	1578	115	0.0019011406844106464	-	ACAACUUUUGACGGC	753	1515	22	6	22	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8592535-8592955	Cluster_4038	Pocillopora_meandrina_HIv1___Sc0000012	8592535	8592955	421	111	63	0.036036036036036036	-	AAUGGGAAAACGAGGACAGCGUGA	13	5	69	2	2	11	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8593071-8594026	Cluster_4039	Pocillopora_meandrina_HIv1___Sc0000012	8593071	8594026	956	3560	329	0.008707865168539325	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	1275	16	3440	2	3	32	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8627598-8628014	Cluster_4040	Pocillopora_meandrina_HIv1___Sc0000012	8627598	8628014	417	156	22	0.0	-	UUUGACAACUUUUGACA	64	153	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8669892-8670345	Cluster_4041	Pocillopora_meandrina_HIv1___Sc0000012	8669892	8670345	454	220	104	0.9545454545454546	+	UGAGAGAGCUGCUGAGUGCAAAAAGUACUUC	48	15	199	2	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8678382-8678809	Cluster_4042	Pocillopora_meandrina_HIv1___Sc0000012	8678382	8678809	428	157	75	1.0	+	UGCUACAAAAAAGGACGUGUUGAGCAGGC	22	1	155	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8680468-8680894	Cluster_4043	Pocillopora_meandrina_HIv1___Sc0000012	8680468	8680894	427	258	127	0.9922480620155039	+	UGCUCUUGUCUUGGAUGUAAGUGCCUAACA	27	3	251	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8684119-8684548	Cluster_4044	Pocillopora_meandrina_HIv1___Sc0000012	8684119	8684548	430	326	109	0.99079754601227	+	UGACAUCGACAUAAGACAUAGAAAAAUGCG	83	3	313	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8702728-8703537	Cluster_4045	Pocillopora_meandrina_HIv1___Sc0000012	8702728	8703537	810	1568	263	0.9974489795918368	+	UACAUAGCCUUGAGGGUUGCAUUGCUCCACA	339	17	1484	2	1	57	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8706676-8707249	Cluster_4046	Pocillopora_meandrina_HIv1___Sc0000012	8706676	8707249	574	39494	589	0.9975692510254722	+	UUGUCUACAAGAAGCCUGUCCAUUUUGU	26293	107	39001	15	44	48	279	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8707330-8707984	Cluster_4047	Pocillopora_meandrina_HIv1___Sc0000012	8707330	8707984	655	1879	408	0.9771154869611496	+	UUUUCCCAUUGAACUACAAUAAAACCCAUC	189	94	1716	25	10	12	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8709379-8709804	Cluster_4048	Pocillopora_meandrina_HIv1___Sc0000012	8709379	8709804	426	185	80	0.9945945945945946	+	UGUUGAUUGCUUGACCACUGAGUUGA	50	1	164	7	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8715359-8715779	Cluster_4049	Pocillopora_meandrina_HIv1___Sc0000012	8715359	8715779	421	77	22	0.987012987012987	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	25	0	75	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8718444-8718865	Cluster_4050	Pocillopora_meandrina_HIv1___Sc0000012	8718444	8718865	422	214	121	0.8738317757009346	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	10	4	197	0	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8718887-8719317	Cluster_4051	Pocillopora_meandrina_HIv1___Sc0000012	8718887	8719317	431	310	141	0.9451612903225807	+	UGAUAACUGUACUCUUGAAAUUCAUCGAU	15	4	292	2	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8721579-8722738	Cluster_4052	Pocillopora_meandrina_HIv1___Sc0000012	8721579	8722738	1160	3176	996	0.4836272040302267	.	UGCAUUAUGUCAAAUUUAGAUUCAUCU	209	59	2842	18	26	78	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8726442-8727514	Cluster_4053	Pocillopora_meandrina_HIv1___Sc0000012	8726442	8727514	1073	3789	917	0.8788598574821853	+	UUGGUAACAGUGUGGUGGAGAACGUGAUU	136	43	3581	26	28	46	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8729518-8730305	Cluster_4054	Pocillopora_meandrina_HIv1___Sc0000012	8729518	8730305	788	393	159	0.9745547073791349	+	UCGGUAACUAAACGGUCAAAAUUAUACUUU	74	1	379	1	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8731310-8731727	Cluster_4055	Pocillopora_meandrina_HIv1___Sc0000012	8731310	8731727	418	107	37	0.9906542056074766	+	UGAUCUUUGCAAUGACGUUGUGACUGAAAA	22	4	100	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8749756-8750172	Cluster_4056	Pocillopora_meandrina_HIv1___Sc0000012	8749756	8750172	417	1019	25	0.023552502453385672	-	AUGUACAAUUCUAGACU	915	995	24	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8752386-8752974	Cluster_4057	Pocillopora_meandrina_HIv1___Sc0000012	8752386	8752974	589	6988	572	0.6562678878076703	.	UACGUCUGGCCAGCAAUCAACAUCGUC	1485	230	5737	93	27	42	859	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8753728-8754289	Cluster_4058	Pocillopora_meandrina_HIv1___Sc0000012	8753728	8754289	562	375	103	0.992	+	UAGGUAGUAACGACUGAAAAAAUUCCCU	54	32	332	2	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8759693-8760122	Cluster_4059	Pocillopora_meandrina_HIv1___Sc0000012	8759693	8760122	430	283	111	1.0	+	UGAGCAAGUAACAAAAUCGUUUUGUGGAUU	70	2	269	0	5	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8760474-8760900	Cluster_4060	Pocillopora_meandrina_HIv1___Sc0000012	8760474	8760900	427	339	88	0.8466076696165191	+	UCUGUUUCCAUUGUAUUGAGAGUCUCA	157	7	327	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8762437-8762904	Cluster_4061	Pocillopora_meandrina_HIv1___Sc0000012	8762437	8762904	468	706	227	0.839943342776204	+	UCUUUCGAUCUUCGUCAAACGAACCCGUU	214	106	519	51	19	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8769961-8770387	Cluster_4062	Pocillopora_meandrina_HIv1___Sc0000012	8769961	8770387	427	209	98	0.9330143540669856	+	UGAUUCAUCAGUAUUAAUGACUGUAGU	64	10	190	0	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8770560-8770965	Cluster_4063	Pocillopora_meandrina_HIv1___Sc0000012	8770560	8770965	406	318	195	0.6289308176100629	.	UGACUAAACUGUGCUCGUGGAAUGUAUG	13	9	254	8	5	18	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8771210-8771612	Cluster_4064	Pocillopora_meandrina_HIv1___Sc0000012	8771210	8771612	403	143	99	0.8461538461538461	+	UGCGAGUGGCUACUUUGAAUAAUUUAAAC	7	1	132	0	0	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8771991-8772496	Cluster_4065	Pocillopora_meandrina_HIv1___Sc0000012	8771991	8772496	506	591	232	0.7478849407783418	.	UAGGACAUCAAAUCUGCAAAUUUUCUGU	73	10	532	2	6	13	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8783229-8784510	Cluster_4066	Pocillopora_meandrina_HIv1___Sc0000012	8783229	8784510	1282	3789	1395	0.3106360517286883	.	UAAUGACACAGUCUGGAUAGAAGGAUU	140	83	3268	53	31	77	277	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8785059-8786838	Cluster_4067	Pocillopora_meandrina_HIv1___Sc0000012	8785059	8786838	1780	3131	1163	0.7639731715106994	.	AGGUGUAGAAUGUAAAAAGCAGCU	152	44	2650	33	23	71	310	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8791402-8791822	Cluster_4068	Pocillopora_meandrina_HIv1___Sc0000012	8791402	8791822	421	7410	218	0.03387314439946019	-	GAAUCGGCCGUGGAC	2801	7157	242	0	2	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8806213-8807054	Cluster_4069	Pocillopora_meandrina_HIv1___Sc0000012	8806213	8807054	842	3157	786	0.8818498574596135	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	326	20	2990	17	14	23	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8807244-8810040	Cluster_4070	Pocillopora_meandrina_HIv1___Sc0000012	8807244	8810040	2797	13691	2880	0.8659703454824337	+	UGAUCGAUAGUUUCGCUCUGGAGUUGUG	935	130	12833	54	64	221	389	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8827931-8828910	Cluster_4071	Pocillopora_meandrina_HIv1___Sc0000012	8827931	8828910	980	1251	219	0.9888089528377298	+	UGUCACACUUUGAACACACAAAAAAGGA	303	140	1063	11	7	1	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:8840948-8841362	Cluster_4072	Pocillopora_meandrina_HIv1___Sc0000012	8840948	8841362	415	264	23	0.0946969696969697	-	GAAUCGGCCGUGGCU	225	239	25	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9075476-9076778	Cluster_4073	Pocillopora_meandrina_HIv1___Sc0000012	9075476	9076778	1303	1361	626	0.9823659074210139	+	UGCUUUCUGUUCUCUUGUUCUCCAACAAA	60	14	1295	5	13	20	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9076968-9077377	Cluster_4074	Pocillopora_meandrina_HIv1___Sc0000012	9076968	9077377	410	196	121	0.3979591836734694	.	ACUGGAUACAAAACUGCUCGAUGC	26	4	138	1	3	7	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9077772-9078199	Cluster_4075	Pocillopora_meandrina_HIv1___Sc0000012	9077772	9078199	428	213	93	0.03286384976525822	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	53	2	207	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9079951-9081502	Cluster_4076	Pocillopora_meandrina_HIv1___Sc0000012	9079951	9081502	1552	10635	1887	0.9833568406205924	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1218	102	10198	32	40	78	185	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9102736-9104307	Cluster_4077	Pocillopora_meandrina_HIv1___Sc0000012	9102736	9104307	1572	2283	1014	0.9224704336399474	+	UAGGAUCAUAGUCUUUGAACUCCGACGG	87	26	2082	9	16	97	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9104863-9105713	Cluster_4078	Pocillopora_meandrina_HIv1___Sc0000012	9104863	9105713	851	1573	533	0.901462174189447	+	UGAUUUAUAGGAGUAAUGAGACAUUAU	148	30	1442	17	31	15	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9109032-9110534	Cluster_4079	Pocillopora_meandrina_HIv1___Sc0000012	9109032	9110534	1503	1645	711	0.9641337386018237	+	UGAUUUCCUCUCUGACAUCUAAAGGU	49	19	1537	5	28	20	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9110815-9111244	Cluster_4080	Pocillopora_meandrina_HIv1___Sc0000012	9110815	9111244	430	641	192	0.9781591263650546	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	153	1	621	2	4	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9112220-9113011	Cluster_4081	Pocillopora_meandrina_HIv1___Sc0000012	9112220	9113011	792	1070	439	0.7869158878504673	.	UGCUCAAAACGUUCUACUCCGAAAAGUAU	41	34	891	6	14	66	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9113299-9113734	Cluster_4082	Pocillopora_meandrina_HIv1___Sc0000012	9113299	9113734	436	225	85	0.9333333333333333	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	39	1	203	0	1	15	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9114316-9114857	Cluster_4083	Pocillopora_meandrina_HIv1___Sc0000012	9114316	9114857	542	865	369	0.7965317919075144	.	UCUAUCACUUUGUCGAUGUCGGUUUUCUC	30	58	705	12	8	17	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9116932-9118951	Cluster_4084	Pocillopora_meandrina_HIv1___Sc0000012	9116932	9118951	2020	2988	1225	0.9548192771084337	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	90	24	2826	9	25	53	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9119216-9120301	Cluster_4085	Pocillopora_meandrina_HIv1___Sc0000012	9119216	9120301	1086	6034	591	0.919124958568114	+	UCAUAGAGUUUAAGACAAGCCCAACAGGUC	2370	114	5674	34	114	41	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9126646-9127053	Cluster_4086	Pocillopora_meandrina_HIv1___Sc0000012	9126646	9127053	408	245	134	0.9714285714285714	+	UCUCUAACUCGUCGUCUGCUUCAUCAGC	23	12	225	3	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9127123-9127835	Cluster_4087	Pocillopora_meandrina_HIv1___Sc0000012	9127123	9127835	713	989	193	0.9929221435793731	+	UUAUAACCGAGUGUGCCUUAUAACCGAAU	189	8	973	0	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9144222-9144638	Cluster_4088	Pocillopora_meandrina_HIv1___Sc0000012	9144222	9144638	417	140	30	0.9928571428571429	+	CCAUCCUCGUCGCCA	37	133	5	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9153751-9154827	Cluster_4089	Pocillopora_meandrina_HIv1___Sc0000012	9153751	9154827	1077	4897	1074	0.9085154176026139	+	UCAUCGACAUGCCUUGACUUUGAGCAGU	639	82	4634	23	18	47	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9192779-9193208	Cluster_4090	Pocillopora_meandrina_HIv1___Sc0000012	9192779	9193208	430	293	75	0.0034129692832764505	-	UACUCCGACACUCCGAUAUGUGAUACUAC	77	6	284	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9263570-9263984	Cluster_4091	Pocillopora_meandrina_HIv1___Sc0000012	9263570	9263984	415	87	9	1.0	+	UUACAUCGUGUCUUUU	39	87	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9311500-9311918	Cluster_4092	Pocillopora_meandrina_HIv1___Sc0000012	9311500	9311918	419	156	93	0.019230769230769232	-	CCCAAACUGUAUGUGAAGCUUCA	25	61	25	8	14	35	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9312883-9313417	Cluster_4093	Pocillopora_meandrina_HIv1___Sc0000012	9312883	9313417	535	355	185	0.0	-	AAUAUUGUGGAGGCAGCUGCA	15	154	79	36	19	38	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9331990-9332405	Cluster_4094	Pocillopora_meandrina_HIv1___Sc0000012	9331990	9332405	416	77	4	1.0	+	GGUAAAUAAUUCGGACU	67	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9393358-9393772	Cluster_4095	Pocillopora_meandrina_HIv1___Sc0000012	9393358	9393772	415	113	17	0.8849557522123894	+	AUCUCUAGGCUCACA	81	106	5	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9416464-9416881	Cluster_4096	Pocillopora_meandrina_HIv1___Sc0000012	9416464	9416881	418	883	82	1.0	+	UGGGUGGCGUUUUCUU	229	877	2	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9496538-9497031	Cluster_4097	Pocillopora_meandrina_HIv1___Sc0000012	9496538	9497031	494	219	39	0.5296803652968036	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	69	0	217	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9751541-9751968	Cluster_4098	Pocillopora_meandrina_HIv1___Sc0000012	9751541	9751968	428	89	31	0.9662921348314607	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	32	0	88	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9767406-9767836	Cluster_4099	Pocillopora_meandrina_HIv1___Sc0000012	9767406	9767836	431	1143	89	0.014873140857392825	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	413	0	1143	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9772164-9772580	Cluster_4100	Pocillopora_meandrina_HIv1___Sc0000012	9772164	9772580	417	100	19	1.0	+	AUCCCACUCCUGACACCA	26	97	0	0	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9778224-9778651	Cluster_4101	Pocillopora_meandrina_HIv1___Sc0000012	9778224	9778651	428	132	26	0.9848484848484849	+	UUCCUGCAAUGGUUUGUGCAUCGUCUGGC	29	1	131	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9831019-9831444	Cluster_4102	Pocillopora_meandrina_HIv1___Sc0000012	9831019	9831444	426	198	93	0.9797979797979798	+	UCUGUCUCUACGUCGGUGCAAACCAUGCGC	14	8	184	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9836384-9836811	Cluster_4103	Pocillopora_meandrina_HIv1___Sc0000012	9836384	9836811	428	303	127	0.7557755775577558	.	UCGAUCAGGAGAUACAGAGGGAGCUGAGA	27	10	229	0	13	15	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9922141-9922628	Cluster_4104	Pocillopora_meandrina_HIv1___Sc0000012	9922141	9922628	488	663	221	0.7315233785822021	.	CGGCUGCUCAGUAAUUUUCGAUGGGAGU	78	13	580	13	9	16	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9958130-9958557	Cluster_4105	Pocillopora_meandrina_HIv1___Sc0000012	9958130	9958557	428	172	59	0.12209302325581395	-	AACUGAUAGAGCUGCUACACCUGGAAGC	71	18	126	8	11	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9964596-9965200	Cluster_4106	Pocillopora_meandrina_HIv1___Sc0000012	9964596	9965200	605	6571	307	0.0015218383807639629	-	UACUGAACUGGCUAACAUUUGUACAAAAUC	3411	46	6210	4	37	19	255	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9965344-9965831	Cluster_4107	Pocillopora_meandrina_HIv1___Sc0000012	9965344	9965831	488	495	126	0.0	-	UGUUCUCUGUCUCUUCACCACCAUUUGCAG	66	9	476	1	4	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000012:9966705-9967134	Cluster_4108	Pocillopora_meandrina_HIv1___Sc0000012	9966705	9967134	430	452	122	0.05088495575221239	-	UUUGCUCUCCAUUCUGCCAGUAGGCCA	51	36	405	4	1	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:46261-46675	Cluster_4109	Pocillopora_meandrina_HIv1___Sc0000013	46261	46675	415	153	9	1.0	+	CUUUCCGAGGUCGGG	128	153	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:247172-247662	Cluster_4110	Pocillopora_meandrina_HIv1___Sc0000013	247172	247662	491	617	275	0.3095623987034036	.	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	18	42	427	10	18	41	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:249631-250052	Cluster_4111	Pocillopora_meandrina_HIv1___Sc0000013	249631	250052	422	146	64	0.9657534246575342	+	UCGACAAUGAUUUCGGUCUUCUUUCUUGGA	24	1	136	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:250241-250671	Cluster_4112	Pocillopora_meandrina_HIv1___Sc0000013	250241	250671	431	317	155	0.9148264984227129	+	UGAGGACAGAUCUAAUGUACUGAAAAGCGUU	30	1	305	0	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:250823-251251	Cluster_4113	Pocillopora_meandrina_HIv1___Sc0000013	250823	251251	429	193	81	0.9689119170984456	+	UGAAUAAAUCUUGGUGUGAACAGGCUGCA	42	1	187	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:251265-252162	Cluster_4114	Pocillopora_meandrina_HIv1___Sc0000013	251265	252162	898	881	404	0.8615209988649262	+	UCUACGUCUUUCGCUUGUUUUUCACUGAGU	34	8	804	4	5	21	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:347884-350365	Cluster_4115	Pocillopora_meandrina_HIv1___Sc0000013	347884	350365	2482	5124	1658	0.9311085089773614	+	UCCGAGACUGUAGAUCCGAGUUGAUCCA	190	42	4778	22	28	75	179	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:474790-475216	Cluster_4116	Pocillopora_meandrina_HIv1___Sc0000013	474790	475216	427	177	67	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	19	1	169	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:560422-560849	Cluster_4117	Pocillopora_meandrina_HIv1___Sc0000013	560422	560849	428	462	50	1.0	+	UAAUCGUUGGCUUUUUCUCGAGGCGGG	167	3	459	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:742806-743234	Cluster_4118	Pocillopora_meandrina_HIv1___Sc0000013	742806	743234	429	475	137	0.9768421052631578	+	UGUAGAAUCAAUCUGUUACUAAGACACC	107	5	447	13	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:743992-744451	Cluster_4119	Pocillopora_meandrina_HIv1___Sc0000013	743992	744451	460	1610	494	0.8267080745341615	+	UAUACCUUUGAUUCAUAGCCUUUCUGAUU	79	18	1447	19	20	29	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:744782-746779	Cluster_4120	Pocillopora_meandrina_HIv1___Sc0000013	744782	746779	1998	5352	1634	0.10444693572496264	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	364	74	4986	34	27	67	164	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:746786-747213	Cluster_4121	Pocillopora_meandrina_HIv1___Sc0000013	746786	747213	428	351	183	0.1282051282051282	-	UUGUCGUGAUCUUUCACUGCUUCUUGC	48	6	324	1	1	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:747331-747757	Cluster_4122	Pocillopora_meandrina_HIv1___Sc0000013	747331	747757	427	172	89	0.046511627906976744	-	UGAACUUCUCGGCUCCAAACACUAUGG	43	2	163	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:747773-748277	Cluster_4123	Pocillopora_meandrina_HIv1___Sc0000013	747773	748277	505	736	279	0.09375	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	62	14	666	5	6	16	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:748490-749664	Cluster_4124	Pocillopora_meandrina_HIv1___Sc0000013	748490	749664	1175	1208	483	0.052152317880794705	-	UAAGUGCGCUCUCAUGUAGAUAUAUGGG	95	22	1087	1	23	24	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:922124-922918	Cluster_4125	Pocillopora_meandrina_HIv1___Sc0000013	922124	922918	795	263	114	0.9695817490494296	+	UGAAUUUCUGAAGUGUGUUACUGUGGUA	35	4	245	3	0	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:951699-952118	Cluster_4126	Pocillopora_meandrina_HIv1___Sc0000013	951699	952118	420	223	44	0.13452914798206278	-	GGUUGGGUCCGGCCCGGA	21	223	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1208342-1208772	Cluster_4127	Pocillopora_meandrina_HIv1___Sc0000013	1208342	1208772	431	349	60	0.9885386819484241	+	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	105	2	346	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1574802-1575213	Cluster_4128	Pocillopora_meandrina_HIv1___Sc0000013	1574802	1575213	412	165	99	0.806060606060606	+	UAAGACGCACUCUACUCUGUUGUCAAUAC	13	11	140	2	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1671541-1672316	Cluster_4129	Pocillopora_meandrina_HIv1___Sc0000013	1671541	1672316	776	251	41	0.9681274900398407	+	UUGGACUGUGCAUAACCAUUUGC	118	5	90	3	5	142	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1700378-1701254	Cluster_4130	Pocillopora_meandrina_HIv1___Sc0000013	1700378	1701254	877	5706	1388	0.6254819488257974	.	AAGCAGAAGAAGAUCUUGGUGACA	677	96	3931	34	160	233	1252	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1701277-1701919	Cluster_4131	Pocillopora_meandrina_HIv1___Sc0000013	1701277	1701919	643	558	290	0.34229390681003585	.	ACCCAGUUGAAGAACGAGAGACGU	48	18	397	1	5	26	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1702164-1702858	Cluster_4132	Pocillopora_meandrina_HIv1___Sc0000013	1702164	1702858	695	1057	386	0.05676442762535478	-	UGUUCCUUGAAUUCUGCGUGCACAAAGC	209	25	990	3	7	9	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1702993-1704978	Cluster_4133	Pocillopora_meandrina_HIv1___Sc0000013	1702993	1704978	1986	2791	1207	0.0695091365102114	-	UGAUAACUUGCUAUCGAUCGCGGUACU	84	67	2561	30	18	38	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1705053-1705652	Cluster_4134	Pocillopora_meandrina_HIv1___Sc0000013	1705053	1705652	600	1700	728	0.14470588235294118	-	UAGGUUGGAACUUGCUCACUGUGUGCG	61	49	1418	31	26	80	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1714412-1714827	Cluster_4135	Pocillopora_meandrina_HIv1___Sc0000013	1714412	1714827	416	287	192	0.8745644599303136	+	UCUAUAUUACAAAAUAAAUUGUGGGACGUA	16	98	122	32	19	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1869677-1870651	Cluster_4136	Pocillopora_meandrina_HIv1___Sc0000013	1869677	1870651	975	690	254	0.0782608695652174	-	UGAUCAAGUUUCCUAUCGCCUGUAAACA	88	16	646	2	4	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:1924250-1925026	Cluster_4137	Pocillopora_meandrina_HIv1___Sc0000013	1924250	1925026	777	236	25	0.9957627118644068	+	UUGGACUGUGCAUAACCAUUUGC	113	1	91	0	5	134	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2014873-2016820	Cluster_4138	Pocillopora_meandrina_HIv1___Sc0000013	2014873	2016820	1948	3146	1015	0.24507310870947235	.	UGAUACGAGUAGUUGGAUACAAUCUAAACU	308	35	2859	15	24	51	162	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2017863-2019125	Cluster_4139	Pocillopora_meandrina_HIv1___Sc0000013	2017863	2019125	1263	1320	541	0.7803030303030303	.	UGUAACUGGUUCACUGCGAUUUUGUAGU	99	17	1137	11	14	49	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2019206-2019650	Cluster_4140	Pocillopora_meandrina_HIv1___Sc0000013	2019206	2019650	445	856	260	0.8271028037383178	+	UGAUAUGACCUUCGGCAAAAAACUGGA	86	8	745	2	7	23	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2586733-2587160	Cluster_4141	Pocillopora_meandrina_HIv1___Sc0000013	2586733	2587160	428	198	78	0.010101010101010102	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	35	4	191	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2639722-2640750	Cluster_4142	Pocillopora_meandrina_HIv1___Sc0000013	2639722	2640750	1029	2300	602	0.9839130434782609	+	UCGGAUUACGCACGAUCACACGUGUCGAGC	96	12	2232	6	10	16	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2641296-2642053	Cluster_4143	Pocillopora_meandrina_HIv1___Sc0000013	2641296	2642053	758	712	339	0.9634831460674157	+	UGCGUUCCUGAAGCAACUUUUGCCUC	53	17	661	10	3	7	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2949721-2950122	Cluster_4144	Pocillopora_meandrina_HIv1___Sc0000013	2949721	2950122	402	117	61	0.09401709401709402	-	UGUAAUCAUACGCUUAGCCUCAGUGAACGCU	16	0	106	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2950203-2950680	Cluster_4145	Pocillopora_meandrina_HIv1___Sc0000013	2950203	2950680	478	370	193	0.04054054054054054	-	UAGGUAAUGGCACAAACUGAGAGGCGU	23	4	349	2	2	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:2953747-2954523	Cluster_4146	Pocillopora_meandrina_HIv1___Sc0000013	2953747	2954523	777	248	26	0.9919354838709677	+	UUGGACUGUGCAUAACCAUUUGC	105	1	115	0	7	123	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3143644-3144540	Cluster_4147	Pocillopora_meandrina_HIv1___Sc0000013	3143644	3144540	897	1820	547	0.0967032967032967	-	UAAUAGCGACUUUCAACUUCGUGUUUGUC	187	30	1676	12	23	24	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3145052-3146621	Cluster_4148	Pocillopora_meandrina_HIv1___Sc0000013	3145052	3146621	1570	2212	975	0.06645569620253164	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	66	16	2032	7	13	74	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3236496-3236922	Cluster_4149	Pocillopora_meandrina_HIv1___Sc0000013	3236496	3236922	427	151	59	0.033112582781456956	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	37	0	145	0	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3300861-3301290	Cluster_4150	Pocillopora_meandrina_HIv1___Sc0000013	3300861	3301290	430	635	155	0.9858267716535433	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	121	4	622	1	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3301410-3301941	Cluster_4151	Pocillopora_meandrina_HIv1___Sc0000013	3301410	3301941	532	616	243	0.9918831168831169	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	31	3	601	1	0	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3303861-3304796	Cluster_4152	Pocillopora_meandrina_HIv1___Sc0000013	3303861	3304796	936	553	296	0.9005424954792043	+	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	26	7	498	11	3	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3304810-3305374	Cluster_4153	Pocillopora_meandrina_HIv1___Sc0000013	3304810	3305374	565	3573	702	0.9787293590820039	+	UGAUUUGUACGACCCACUCCUGUUAAC	359	291	3126	9	28	33	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3318564-3319049	Cluster_4154	Pocillopora_meandrina_HIv1___Sc0000013	3318564	3319049	486	499	296	0.22044088176352705	.	UGAAUUUCGAUCUGCAGACUCUCGGUA	18	5	429	1	4	11	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3319168-3320238	Cluster_4155	Pocillopora_meandrina_HIv1___Sc0000013	3319168	3320238	1071	3217	925	0.06154802611128381	-	UAUUGAUCUUACAGGCUCCGCAGCGGUU	177	47	3009	23	16	38	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3320297-3321342	Cluster_4156	Pocillopora_meandrina_HIv1___Sc0000013	3320297	3321342	1046	1001	410	0.04195804195804196	-	UAUAGUUCUUCUGUACUGGCUCAUUGUC	60	13	953	5	7	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3322348-3322772	Cluster_4157	Pocillopora_meandrina_HIv1___Sc0000013	3322348	3322772	425	261	147	0.05363984674329502	-	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	28	4	240	3	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3322994-3323396	Cluster_4158	Pocillopora_meandrina_HIv1___Sc0000013	3322994	3323396	403	150	93	0.06	-	UGGGAAUCCGAAUCGUGGUACAAAGUCA	14	4	128	4	4	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3323431-3324524	Cluster_4159	Pocillopora_meandrina_HIv1___Sc0000013	3323431	3324524	1094	1240	479	0.020161290322580645	-	UGAGACUCUCUUGUUGUAAUAUUGCUUG	99	9	1200	3	5	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3417712-3418164	Cluster_4160	Pocillopora_meandrina_HIv1___Sc0000013	3417712	3418164	453	247	100	0.9595141700404858	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	22	3	238	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3418321-3418748	Cluster_4161	Pocillopora_meandrina_HIv1___Sc0000013	3418321	3418748	428	321	185	0.8473520249221184	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	24	3	285	1	2	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3418981-3422943	Cluster_4162	Pocillopora_meandrina_HIv1___Sc0000013	3418981	3422943	3963	6060	2187	0.8978547854785478	+	UGUACAACCAUCCGAUACUCUUGU	670	217	4546	32	42	95	1128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3423803-3424972	Cluster_4163	Pocillopora_meandrina_HIv1___Sc0000013	3423803	3424972	1170	1404	578	0.8660968660968661	+	UACAAUAACCUCUGAUUUCACUAAAUG	68	14	1286	6	15	17	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3639403-3640179	Cluster_4164	Pocillopora_meandrina_HIv1___Sc0000013	3639403	3640179	777	391	46	0.9923273657289002	+	UUGGACUGUGCAUAACCAUUUGC	113	2	247	1	4	131	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3889072-3889787	Cluster_4165	Pocillopora_meandrina_HIv1___Sc0000013	3889072	3889787	716	388	198	0.028350515463917526	-	UGUAUUCUGCUACUGGUUCUCCCGAGC	32	3	375	3	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3890553-3890979	Cluster_4166	Pocillopora_meandrina_HIv1___Sc0000013	3890553	3890979	427	116	48	0.0603448275862069	-	UGUGUGUAAGUCGAUUGAUAAUAUCUUC	31	4	98	0	1	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:3905243-3905657	Cluster_4167	Pocillopora_meandrina_HIv1___Sc0000013	3905243	3905657	415	255	5	1.0	+	AACUUUUGACGGUGU	250	255	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4059763-4060364	Cluster_4168	Pocillopora_meandrina_HIv1___Sc0000013	4059763	4060364	602	936	313	0.9946581196581197	+	UGUUCUUCUUGACUCUGACGAUCUUCAAC	88	4	921	3	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4060437-4061315	Cluster_4169	Pocillopora_meandrina_HIv1___Sc0000013	4060437	4061315	879	847	376	0.9834710743801653	+	UUAACGACUGGAUUCUUUCAUCUGCUUUC	47	14	797	2	9	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4061438-4062570	Cluster_4170	Pocillopora_meandrina_HIv1___Sc0000013	4061438	4062570	1133	1352	582	0.985207100591716	+	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	78	18	1298	5	5	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4062973-4063457	Cluster_4171	Pocillopora_meandrina_HIv1___Sc0000013	4062973	4063457	485	485	166	0.9938144329896907	+	UACAAAGCUCUCACGAAUUCACAAACAGA	56	1	479	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4081126-4081571	Cluster_4172	Pocillopora_meandrina_HIv1___Sc0000013	4081126	4081571	446	599	75	0.7278797996661102	.	UCGUUUAGAUCAGAGAUCACCUCAACU	217	1	587	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4113474-4113899	Cluster_4173	Pocillopora_meandrina_HIv1___Sc0000013	4113474	4113899	426	96	35	0.9895833333333334	+	UGUGUAGAUAUGUCUUUUGGACAGGA	29	1	94	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4115225-4115643	Cluster_4174	Pocillopora_meandrina_HIv1___Sc0000013	4115225	4115643	419	159	87	0.8930817610062893	+	UAAAAUGACUGUUUCCGAUGUUCCCU	12	1	147	1	7	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4150193-4150672	Cluster_4175	Pocillopora_meandrina_HIv1___Sc0000013	4150193	4150672	480	1734	216	0.9988465974625144	+	UGGACAAAUUCAUAGGUCUGAUGCAAAC	284	31	1680	3	6	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4150722-4151148	Cluster_4176	Pocillopora_meandrina_HIv1___Sc0000013	4150722	4151148	427	183	66	0.9617486338797814	+	UAAGACCCAUCCAUCACUAUCAACUCG	36	2	180	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4151796-4152224	Cluster_4177	Pocillopora_meandrina_HIv1___Sc0000013	4151796	4152224	429	177	37	0.9830508474576272	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	82	1	176	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4157441-4157851	Cluster_4178	Pocillopora_meandrina_HIv1___Sc0000013	4157441	4157851	411	109	44	0.5504587155963303	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	22	0	106	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4160208-4160634	Cluster_4179	Pocillopora_meandrina_HIv1___Sc0000013	4160208	4160634	427	187	63	0.8449197860962567	+	UGUCAAAUUCUCGUCUUCCUAACCUUU	72	0	182	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4178119-4178583	Cluster_4180	Pocillopora_meandrina_HIv1___Sc0000013	4178119	4178583	465	460	170	0.11304347826086956	-	UUAAACCGACUCACAGUCCGAUUCGAAU	94	6	417	7	4	8	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4188969-4190082	Cluster_4181	Pocillopora_meandrina_HIv1___Sc0000013	4188969	4190082	1114	641	334	0.07956318252730109	-	UAGGUAAUGGCACAAACUGAGAGGCGU	26	4	595	2	3	12	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4192997-4193773	Cluster_4182	Pocillopora_meandrina_HIv1___Sc0000013	4192997	4193773	777	244	30	0.9877049180327869	+	UUGGACUGUGCAUAACCAUUUGC	113	0	104	0	1	136	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4470522-4471298	Cluster_4183	Pocillopora_meandrina_HIv1___Sc0000013	4470522	4471298	777	242	34	0.987603305785124	+	UUGGACUGUGCAUAACCAUUUGC	116	0	84	1	7	143	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4504525-4504942	Cluster_4184	Pocillopora_meandrina_HIv1___Sc0000013	4504525	4504942	418	219	3	1.0	+	UGGCCUGAAAAAAAAAAA	177	219	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4609215-4609720	Cluster_4185	Pocillopora_meandrina_HIv1___Sc0000013	4609215	4609720	506	338	133	0.5295857988165681	.	AAGGAUACCACAUUCGGAAGUGUAAGAGA	54	21	291	5	2	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4609804-4610233	Cluster_4186	Pocillopora_meandrina_HIv1___Sc0000013	4609804	4610233	430	354	150	0.9745762711864406	+	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	39	12	249	9	3	28	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4811422-4811847	Cluster_4187	Pocillopora_meandrina_HIv1___Sc0000013	4811422	4811847	426	167	84	0.2934131736526946	.	UGUCGACCGCAACCGCAAGCUUUCCGAGU	22	9	151	2	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4816169-4816691	Cluster_4188	Pocillopora_meandrina_HIv1___Sc0000013	4816169	4816691	523	371	122	0.7250673854447439	.	UACGUAUCAAUACAGACACUUUCGUUCA	122	13	337	1	7	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4839370-4839782	Cluster_4189	Pocillopora_meandrina_HIv1___Sc0000013	4839370	4839782	413	83	22	0.963855421686747	+	GCCGUGCUGGCUGACU	16	80	2	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:4860236-4860664	Cluster_4190	Pocillopora_meandrina_HIv1___Sc0000013	4860236	4860664	429	192	49	0.875	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	71	1	180	1	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5103387-5104122	Cluster_4191	Pocillopora_meandrina_HIv1___Sc0000013	5103387	5104122	736	3768	574	0.982484076433121	+	UGGAAAAGGCUUGUUGGAAAUCUUCACG	763	19	3683	4	6	12	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5105250-5106448	Cluster_4192	Pocillopora_meandrina_HIv1___Sc0000013	5105250	5106448	1199	2617	869	0.8291937332823844	+	UAUUGUCAUUCAUUAGUCUCCGUCUGCUGG	104	39	2404	21	19	39	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5107643-5109614	Cluster_4193	Pocillopora_meandrina_HIv1___Sc0000013	5107643	5109614	1972	5559	1515	0.9363194819212088	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	465	28	5325	18	19	55	114	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5110253-5110885	Cluster_4194	Pocillopora_meandrina_HIv1___Sc0000013	5110253	5110885	633	314	138	0.9331210191082803	+	UAUAUAUUAAAUCUGCUUGAAUGAUCGCUC	14	2	283	4	2	6	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5111128-5111556	Cluster_4195	Pocillopora_meandrina_HIv1___Sc0000013	5111128	5111556	429	576	53	1.0	+	UGUGAGUUGAUGUUUGGUGGGAUACCU	200	9	564	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5111652-5112680	Cluster_4196	Pocillopora_meandrina_HIv1___Sc0000013	5111652	5112680	1029	4323	994	0.8924358084663429	+	UCUGCGACUAUGAAAUAAGGCUUCUGC	482	80	4012	18	22	67	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5112751-5113300	Cluster_4197	Pocillopora_meandrina_HIv1___Sc0000013	5112751	5113300	550	4164	576	0.579731027857829	.	ACAAGACAGAAUUCCAGCUGAUACAGA	464	53	3840	8	39	84	140	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5114630-5115060	Cluster_4198	Pocillopora_meandrina_HIv1___Sc0000013	5114630	5115060	431	919	96	0.009793253536452665	-	UUCAUCUGUUGGUAUUCAUUCUGCAAAC	563	2	896	3	1	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5116587-5118347	Cluster_4199	Pocillopora_meandrina_HIv1___Sc0000013	5116587	5118347	1761	2188	704	0.23308957952468007	.	UGUUCUAAUUUGAAAAUCUGCUUCUGU	92	36	1991	7	4	47	103	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5118827-5119253	Cluster_4200	Pocillopora_meandrina_HIv1___Sc0000013	5118827	5119253	427	146	64	0.03424657534246575	-	UAGGUGAUAUUUUUGAAAUUGUUGAUGU	24	3	142	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5119308-5120041	Cluster_4201	Pocillopora_meandrina_HIv1___Sc0000013	5119308	5120041	734	1138	326	0.06590509666080843	-	UAAGAUCCAAUCUGUAUUUCAAUGUCAC	138	9	1079	4	7	14	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5193210-5194947	Cluster_4202	Pocillopora_meandrina_HIv1___Sc0000013	5193210	5194947	1738	2741	1078	0.045968624589565854	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	111	24	2580	13	28	47	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5199542-5200166	Cluster_4203	Pocillopora_meandrina_HIv1___Sc0000013	5199542	5200166	625	1002	421	0.03792415169660679	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	44	9	953	7	7	4	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5200188-5200852	Cluster_4204	Pocillopora_meandrina_HIv1___Sc0000013	5200188	5200852	665	577	304	0.1438474870017331	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	26	6	500	2	2	13	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5201147-5201896	Cluster_4205	Pocillopora_meandrina_HIv1___Sc0000013	5201147	5201896	750	748	258	0.02807486631016043	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	69	3	729	1	5	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5203239-5204089	Cluster_4206	Pocillopora_meandrina_HIv1___Sc0000013	5203239	5204089	851	1628	532	0.11056511056511056	-	UGAUUUAUAGGAGUAAUGAGACAUUAU	140	21	1487	22	32	18	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5204646-5206216	Cluster_4207	Pocillopora_meandrina_HIv1___Sc0000013	5204646	5206216	1571	2056	943	0.08122568093385214	-	UAUGAUAAAUACUUCUGCCUAGCUCCUGC	60	20	1844	17	13	83	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5206473-5207150	Cluster_4208	Pocillopora_meandrina_HIv1___Sc0000013	5206473	5207150	678	7880	551	0.003553299492385787	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2098	11	7747	7	42	36	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5207204-5208865	Cluster_4209	Pocillopora_meandrina_HIv1___Sc0000013	5207204	5208865	1662	9207	2361	0.07526881720430108	-	UGAUAGACUGCACGACGAUUUACGUCA	549	97	8339	60	81	289	341	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5212065-5212493	Cluster_4210	Pocillopora_meandrina_HIv1___Sc0000013	5212065	5212493	429	104	24	0.0	-	UCAAAUCUGUACCAGUGCCACUCAGCAUC	67	1	103	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5216419-5216850	Cluster_4211	Pocillopora_meandrina_HIv1___Sc0000013	5216419	5216850	432	393	154	0.07888040712468193	-	UGUUUUGGUGUGUUCAAGUAUCUUUGA	30	3	379	0	1	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5219580-5219999	Cluster_4212	Pocillopora_meandrina_HIv1___Sc0000013	5219580	5219999	420	91	46	0.0	-	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	13	2	85	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5221124-5221549	Cluster_4213	Pocillopora_meandrina_HIv1___Sc0000013	5221124	5221549	426	127	44	0.29133858267716534	.	UGUACUUUCUUUGGGCCAUGUAAUCU	19	3	119	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5484731-5485161	Cluster_4214	Pocillopora_meandrina_HIv1___Sc0000013	5484731	5485161	431	200	36	0.995	+	UGUGUGACUUUGUAUGUAUAUUGAGCGU	35	0	200	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5492194-5492621	Cluster_4215	Pocillopora_meandrina_HIv1___Sc0000013	5492194	5492621	428	176	99	0.11363636363636363	-	UGUUUUCCUUGGUCUAUUAAUGAACGUAU	11	0	169	1	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5492635-5493056	Cluster_4216	Pocillopora_meandrina_HIv1___Sc0000013	5492635	5493056	422	130	84	0.19230769230769232	-	UAACACUAUAAACAUUCUGAGGGCGAUU	9	0	116	3	3	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5580444-5580871	Cluster_4217	Pocillopora_meandrina_HIv1___Sc0000013	5580444	5580871	428	103	24	0.02912621359223301	-	UGAACACGCUCUGAGAACUUGUUUUACG	42	0	102	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5586524-5587233	Cluster_4218	Pocillopora_meandrina_HIv1___Sc0000013	5586524	5587233	710	444	197	0.963963963963964	+	UGUGUAGAUAUGUCUUUUGGACAGGA	32	8	417	4	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5587541-5588626	Cluster_4219	Pocillopora_meandrina_HIv1___Sc0000013	5587541	5588626	1086	3614	907	0.9784172661870504	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	129	46	3484	10	17	30	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5588764-5589335	Cluster_4220	Pocillopora_meandrina_HIv1___Sc0000013	5588764	5589335	572	442	183	0.9683257918552036	+	UGCAUUCUCAAGUCGUGCUCUGUAACGG	65	4	404	2	5	4	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5589521-5590015	Cluster_4221	Pocillopora_meandrina_HIv1___Sc0000013	5589521	5590015	495	638	223	0.9529780564263323	+	UGACGUGUCCUAGGUACUCCACAAAACU	60	20	582	1	10	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5590759-5592015	Cluster_4222	Pocillopora_meandrina_HIv1___Sc0000013	5590759	5592015	1257	1405	512	0.9736654804270463	+	UGAUUUGUACGACCCACUCCUGUUAAC	66	33	1321	1	11	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5595130-5595558	Cluster_4223	Pocillopora_meandrina_HIv1___Sc0000013	5595130	5595558	429	314	57	1.0	+	UGGGUUGAGUGAAUUUGUGAGGAAACUGA	130	18	282	3	4	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5595910-5596340	Cluster_4224	Pocillopora_meandrina_HIv1___Sc0000013	5595910	5596340	431	1062	132	0.9990583804143126	+	UUCAUUCUGUAAUCUUCUCUAAGUCUAGA	207	9	1048	3	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5596710-5597139	Cluster_4225	Pocillopora_meandrina_HIv1___Sc0000013	5596710	5597139	430	424	87	0.9009433962264151	+	UGGACAAACAGUAACGUUACUAUUGCGGUU	133	9	409	1	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5735573-5736001	Cluster_4226	Pocillopora_meandrina_HIv1___Sc0000013	5735573	5736001	429	255	97	0.6980392156862745	.	CAGUACCUAAAUCUACAAAGCUUGACCGU	99	10	229	5	4	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5934946-5935366	Cluster_4227	Pocillopora_meandrina_HIv1___Sc0000013	5934946	5935366	421	106	51	0.03773584905660377	-	UAUUUGCACCGUUUUUCUUGAAUAUAGA	19	1	99	0	1	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:5936944-5937371	Cluster_4228	Pocillopora_meandrina_HIv1___Sc0000013	5936944	5937371	428	201	77	0.004975124378109453	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	43	3	194	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6078488-6078915	Cluster_4229	Pocillopora_meandrina_HIv1___Sc0000013	6078488	6078915	428	123	23	0.983739837398374	+	GCACCAAUCAGAGCUGUUGAAAAACAACA	43	0	122	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6097077-6097495	Cluster_4230	Pocillopora_meandrina_HIv1___Sc0000013	6097077	6097495	419	1515	43	0.007260726072607261	-	AACUUGAAGCGGUUGGAU	1215	1507	4	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6168013-6168428	Cluster_4231	Pocillopora_meandrina_HIv1___Sc0000013	6168013	6168428	416	226	18	0.07964601769911504	-	GUGUUCUCGUACGACA	203	218	6	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6278312-6278732	Cluster_4232	Pocillopora_meandrina_HIv1___Sc0000013	6278312	6278732	421	124	65	0.28225806451612906	.	AAGAGUCUGAAGUCAACAAAAUAAACAAGG	11	3	113	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6284962-6285389	Cluster_4233	Pocillopora_meandrina_HIv1___Sc0000013	6284962	6285389	428	129	53	0.007751937984496124	-	UAAAGAACAAUUAAUUAUCUCUGCCACG	26	2	127	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6305354-6305781	Cluster_4234	Pocillopora_meandrina_HIv1___Sc0000013	6305354	6305781	428	100	17	0.06	-	AACUACUGCUCGUGCUCUAGAUAUGACA	68	1	97	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6319583-6320179	Cluster_4235	Pocillopora_meandrina_HIv1___Sc0000013	6319583	6320179	597	5538	493	0.0034308414590104733	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	879	12	5474	6	5	14	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6440807-6441224	Cluster_4236	Pocillopora_meandrina_HIv1___Sc0000013	6440807	6441224	418	298	24	1.0	+	CUGGAGUCUCGGCUU	88	298	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6764524-6764934	Cluster_4237	Pocillopora_meandrina_HIv1___Sc0000013	6764524	6764934	411	115	63	0.991304347826087	+	UGACGAUUUUCGCGGCUCGAUUUUGU	11	1	110	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6783144-6783548	Cluster_4238	Pocillopora_meandrina_HIv1___Sc0000013	6783144	6783548	405	175	87	0.8285714285714286	+	CGGGAUCGAAAAACUAAAUUUUU	8	2	152	0	1	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6788022-6792416	Cluster_4239	Pocillopora_meandrina_HIv1___Sc0000013	6788022	6792416	4395	14717	4063	0.933342393150778	+	UGACUCUUCAAUCUCUGAAACGACUGCUC	514	159	13737	44	75	255	447	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6835668-6836093	Cluster_4240	Pocillopora_meandrina_HIv1___Sc0000013	6835668	6836093	426	114	52	0.0	-	UAAGUUGAUCUCGGUUGUCGAAAGGCAGUA	23	1	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:6869967-6870388	Cluster_4241	Pocillopora_meandrina_HIv1___Sc0000013	6869967	6870388	422	273	162	0.326007326007326	.	AGCGGUCUUCUCUUUUGUGC	14	168	11	66	25	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7081962-7082376	Cluster_4242	Pocillopora_meandrina_HIv1___Sc0000013	7081962	7082376	415	75	3	0.0	-	CCUGUCGGGACCCGA	71	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7230643-7231058	Cluster_4243	Pocillopora_meandrina_HIv1___Sc0000013	7230643	7231058	416	757	7	0.9986789960369881	+	CGGACCUCAGAUCAGA	736	757	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7305232-7305828	Cluster_4244	Pocillopora_meandrina_HIv1___Sc0000013	7305232	7305828	597	5560	493	0.0035971223021582736	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	828	17	5503	3	3	7	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7340257-7341730	Cluster_4245	Pocillopora_meandrina_HIv1___Sc0000013	7340257	7341730	1474	955	472	0.2879581151832461	.	UCAGAACUUCAGUAGCAAUGUGCCUAUA	34	37	853	3	12	22	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7341786-7342214	Cluster_4246	Pocillopora_meandrina_HIv1___Sc0000013	7341786	7342214	429	339	184	0.46017699115044247	.	UAAGAACACAAAGAC	17	41	256	6	14	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7345947-7346369	Cluster_4247	Pocillopora_meandrina_HIv1___Sc0000013	7345947	7346369	423	146	74	0.1643835616438356	-	UUGAACUGUUGCAUGCUUCCAUCAAACAU	14	2	126	0	0	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7347542-7348292	Cluster_4248	Pocillopora_meandrina_HIv1___Sc0000013	7347542	7348292	751	710	177	0.016901408450704224	-	UGUAAUACUUCAACAAGGGUGCCUCUGUC	161	2	701	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7348564-7349496	Cluster_4249	Pocillopora_meandrina_HIv1___Sc0000013	7348564	7349496	933	1094	340	0.04113345521023766	-	UCUUCCUCUUUACUGUUUCAGCUGGUAC	92	14	1027	7	12	14	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7352067-7352496	Cluster_4250	Pocillopora_meandrina_HIv1___Sc0000013	7352067	7352496	430	820	141	0.8914634146341464	+	UUGAGUUGUAUGACACUGGACGUAGAGA	126	4	624	0	5	126	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7354773-7355197	Cluster_4251	Pocillopora_meandrina_HIv1___Sc0000013	7354773	7355197	425	171	78	0.4619883040935672	.	UGUGAAAGCGGAAUUGCUCCACUAUGAGC	13	8	155	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7379717-7380725	Cluster_4252	Pocillopora_meandrina_HIv1___Sc0000013	7379717	7380725	1009	1775	638	0.0016901408450704226	-	UUCUCUGUUUACUGACUCCUUGUGGAAUGU	67	26	1710	2	19	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7384453-7384854	Cluster_4253	Pocillopora_meandrina_HIv1___Sc0000013	7384453	7384854	402	86	36	0.9418604651162791	+	UGUGUUUUCAAGGUCUGCAGCUGAUGU	17	0	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7386581-7387007	Cluster_4254	Pocillopora_meandrina_HIv1___Sc0000013	7386581	7387007	427	319	204	0.6394984326018809	.	UUCUGAGCUCAUGGCACGUG	11	101	159	34	18	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7398727-7400680	Cluster_4255	Pocillopora_meandrina_HIv1___Sc0000013	7398727	7400680	1954	4817	1637	0.11646252854473739	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	354	53	4458	28	33	74	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7400687-7401114	Cluster_4256	Pocillopora_meandrina_HIv1___Sc0000013	7400687	7401114	428	315	138	0.10793650793650794	-	UUGUCGUGAUCUUUCACUGCUUCUUGC	49	5	292	0	1	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7401232-7401658	Cluster_4257	Pocillopora_meandrina_HIv1___Sc0000013	7401232	7401658	427	163	76	0.06134969325153374	-	UGAACUUCUCGGCUCCAAACACUAUGG	39	1	151	0	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7401674-7403566	Cluster_4258	Pocillopora_meandrina_HIv1___Sc0000013	7401674	7403566	1893	1567	644	0.06573069559668156	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	83	18	1465	1	16	30	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7406044-7406903	Cluster_4259	Pocillopora_meandrina_HIv1___Sc0000013	7406044	7406903	860	1555	269	0.043086816720257236	-	UGAUCUGUAUCUGAUGAAAAGCUUCCUC	307	10	1534	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7421857-7422707	Cluster_4260	Pocillopora_meandrina_HIv1___Sc0000013	7421857	7422707	851	1368	485	0.13669590643274854	-	UGUGAAUAUCCAUUUGCUUUGACUGGC	114	31	1230	25	17	18	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7423263-7425037	Cluster_4261	Pocillopora_meandrina_HIv1___Sc0000013	7423263	7425037	1775	2569	1133	0.0903075126508369	-	UAGGAUCAUAGUCUUUGAACUCCGACGG	72	27	2357	10	19	92	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7430118-7430544	Cluster_4262	Pocillopora_meandrina_HIv1___Sc0000013	7430118	7430544	427	142	46	0.014084507042253521	-	UUGGUAACGACUUUCCGGAAAUUUCGGC	25	4	137	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7431063-7432829	Cluster_4263	Pocillopora_meandrina_HIv1___Sc0000013	7431063	7432829	1767	21483	2644	0.14513801610575805	-	UCCGGUCAAUGUUUAGAGAGCUGAAUAA	1392	182	20230	51	120	214	686	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7433202-7433630	Cluster_4264	Pocillopora_meandrina_HIv1___Sc0000013	7433202	7433630	429	396	143	0.7146464646464646	.	UAGGACAAUUAGCAUUACAGCAGCUUA	25	3	371	4	2	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7433650-7435148	Cluster_4265	Pocillopora_meandrina_HIv1___Sc0000013	7433650	7435148	1499	1415	593	0.3674911660777385	.	CGAUUUCUUAUGUUCAUGCGACUGUUGUG	70	37	1228	14	21	31	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7436254-7437564	Cluster_4266	Pocillopora_meandrina_HIv1___Sc0000013	7436254	7437564	1311	1531	694	0.06727629000653168	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	38	14	1416	10	5	28	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7437859-7438607	Cluster_4267	Pocillopora_meandrina_HIv1___Sc0000013	7437859	7438607	749	790	272	0.03291139240506329	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	75	5	771	2	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7441302-7442028	Cluster_4268	Pocillopora_meandrina_HIv1___Sc0000013	7441302	7442028	727	449	240	0.0022271714922048997	-	UGUGUGUCAAAGCUGAACUUAAAGAGCUC	29	8	433	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7453585-7454507	Cluster_4269	Pocillopora_meandrina_HIv1___Sc0000013	7453585	7454507	923	5427	897	0.0062649714391007924	-	UGAUCACUUGGAGGGUUUGCACUCGGAG	734	76	5203	15	24	55	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7464984-7465397	Cluster_4270	Pocillopora_meandrina_HIv1___Sc0000013	7464984	7465397	414	87	22	0.9885057471264368	+	CGCGUAGAACAAAAGGGC	18	86	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7507701-7508574	Cluster_4271	Pocillopora_meandrina_HIv1___Sc0000013	7507701	7508574	874	536	268	0.07462686567164178	-	UGAUAACUGUACUCUUGAAAUUCAUC	17	8	505	2	1	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7511230-7511659	Cluster_4272	Pocillopora_meandrina_HIv1___Sc0000013	7511230	7511659	430	103	27	0.009708737864077669	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	33	1	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7522996-7523424	Cluster_4273	Pocillopora_meandrina_HIv1___Sc0000013	7522996	7523424	429	192	71	0.005208333333333333	-	UAAUAACGACUGCCUUUACUGAAUGGGUC	42	1	189	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7527078-7527803	Cluster_4274	Pocillopora_meandrina_HIv1___Sc0000013	7527078	7527803	726	336	148	0.03869047619047619	-	UUAUAUAUUAAAUCUGCUUGAAUGAUCGC	21	2	307	1	1	4	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7528339-7530310	Cluster_4275	Pocillopora_meandrina_HIv1___Sc0000013	7528339	7530310	1972	5782	1539	0.05984088550674507	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	495	39	5538	14	19	59	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7533026-7533812	Cluster_4276	Pocillopora_meandrina_HIv1___Sc0000013	7533026	7533812	787	728	265	0.0521978021978022	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	42	2	697	3	5	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7535004-7535409	Cluster_4277	Pocillopora_meandrina_HIv1___Sc0000013	7535004	7535409	406	193	95	0.6321243523316062	.	UGAUAUUUUUGACCGGGCAAAAAGAAUUA	15	3	187	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7535593-7536021	Cluster_4278	Pocillopora_meandrina_HIv1___Sc0000013	7535593	7536021	429	364	88	0.9395604395604396	+	UGCAGAUCCAGGGAAAUCACAAUUGACG	86	1	360	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7541850-7543160	Cluster_4279	Pocillopora_meandrina_HIv1___Sc0000013	7541850	7543160	1311	1532	682	0.0685378590078329	-	UCUGUACAGGAAUUAUACGAAUAAUGGC	37	15	1425	10	7	16	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7543455-7544203	Cluster_4280	Pocillopora_meandrina_HIv1___Sc0000013	7543455	7544203	749	731	252	0.038303693570451436	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	62	0	716	1	0	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7546244-7547421	Cluster_4281	Pocillopora_meandrina_HIv1___Sc0000013	7546244	7547421	1178	12155	2148	0.09230769230769231	-	UGUACCACUGAUCUUUGUAACUUUCGCU	437	183	11512	57	84	124	195	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7551769-7552195	Cluster_4282	Pocillopora_meandrina_HIv1___Sc0000013	7551769	7552195	427	190	33	0.07894736842105263	-	UGGGUCUACUUCGAAUUCAUCGUUGUU	82	0	182	0	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7559614-7560998	Cluster_4283	Pocillopora_meandrina_HIv1___Sc0000013	7559614	7560998	1385	8795	1048	0.04388857305287095	-	UGAAGAACUUGGUCGAUUACAUGUUGAUA	4276	53	8457	28	35	69	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7561746-7562427	Cluster_4284	Pocillopora_meandrina_HIv1___Sc0000013	7561746	7562427	682	1449	263	0.031055900621118012	-	UAAUAUCUGCUGUAGUAGUCAACAACUAC	321	11	1404	3	7	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7585879-7586309	Cluster_4285	Pocillopora_meandrina_HIv1___Sc0000013	7585879	7586309	431	1372	137	0.004373177842565598	-	UGGGUUGAGUGAAUUUUUAAGGAAAUUAAA	472	64	1163	8	96	27	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7589860-7590544	Cluster_4286	Pocillopora_meandrina_HIv1___Sc0000013	7589860	7590544	685	673	148	0.0014858841010401188	-	UGCUUCCUGAACAUGUGUUGCUAGAGUGGA	182	14	625	2	25	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7605446-7605875	Cluster_4287	Pocillopora_meandrina_HIv1___Sc0000013	7605446	7605875	430	186	92	0.016129032258064516	-	UUGGUGUAACCACAGCUGUCUUCCAUUUUGA	39	2	180	1	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7605910-7606438	Cluster_4288	Pocillopora_meandrina_HIv1___Sc0000013	7605910	7606438	529	569	255	0.029876977152899824	-	UCUACAUAACUCUGAGUGCUGCAUUUCUGU	34	13	514	2	4	29	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7606715-7608654	Cluster_4289	Pocillopora_meandrina_HIv1___Sc0000013	7606715	7608654	1940	3874	1337	0.031233866804336603	-	UGAUCUGUUCGAUUUCCUGUUUCAAAGC	87	29	3663	10	26	62	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7611227-7612352	Cluster_4290	Pocillopora_meandrina_HIv1___Sc0000013	7611227	7612352	1126	1631	752	0.4064990803188228	.	UCAAGGAUAACUAACUCAUGGCUGAGAUU	37	23	1354	14	17	82	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7615407-7616145	Cluster_4291	Pocillopora_meandrina_HIv1___Sc0000013	7615407	7616145	739	778	330	0.16323907455012854	-	UCAUCUGGUGUGAUUGUAUCGUGUGCAC	41	9	693	10	10	14	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7616597-7617436	Cluster_4292	Pocillopora_meandrina_HIv1___Sc0000013	7616597	7617436	840	434	209	0.16589861751152074	-	UGAGAUCUUUUUAGCUUGAGUUUGUUGA	68	4	403	5	4	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7617489-7618180	Cluster_4293	Pocillopora_meandrina_HIv1___Sc0000013	7617489	7618180	692	603	283	0.13764510779436154	-	UUCUGAAUGAUCUAUCUCGGCAAGUGU	25	15	548	3	2	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7622387-7623211	Cluster_4294	Pocillopora_meandrina_HIv1___Sc0000013	7622387	7623211	825	1152	324	0.017361111111111112	-	UGUUUAUUGUGCGAACUCGACUGCCGCCAC	145	2	1127	1	3	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7624500-7624996	Cluster_4295	Pocillopora_meandrina_HIv1___Sc0000013	7624500	7624996	497	1017	215	0.06686332350049164	-	UGAUAGGACUAAGAGUAUGGUUGAAACC	219	12	933	18	4	23	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7625148-7625559	Cluster_4296	Pocillopora_meandrina_HIv1___Sc0000013	7625148	7625559	412	237	144	0.08860759493670886	-	UAAGGUCUUCCCAAAGUGUCAAUGCGAU	10	5	212	1	4	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7636106-7636536	Cluster_4297	Pocillopora_meandrina_HIv1___Sc0000013	7636106	7636536	431	481	173	0.004158004158004158	-	UGUAUUACUGGAGUAAGUUAGAUCAUCGUCC	72	46	425	3	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7637219-7638133	Cluster_4298	Pocillopora_meandrina_HIv1___Sc0000013	7637219	7638133	915	1266	396	0.022906793048973143	-	UGAAGUCUACCAUUCUCUGACAAAUCGUC	158	13	1205	7	10	17	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7639344-7639771	Cluster_4299	Pocillopora_meandrina_HIv1___Sc0000013	7639344	7639771	428	185	81	0.005405405405405406	-	UCUUCUACUGUUGUGUCUUGUGGAGCACUC	18	3	181	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7644064-7644890	Cluster_4300	Pocillopora_meandrina_HIv1___Sc0000013	7644064	7644890	827	258	49	0.0	-	UUCAUCUGUUUAAGCUUUGAAAUCUUUGC	98	1	253	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7647454-7648695	Cluster_4301	Pocillopora_meandrina_HIv1___Sc0000013	7647454	7648695	1242	11125	1444	0.9786067415730337	+	UCUGACUGACUAACAGGAUAUCUGCUUC	719	54	10816	17	48	72	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7727498-7727914	Cluster_4302	Pocillopora_meandrina_HIv1___Sc0000013	7727498	7727914	417	236	28	0.9872881355932204	+	CCGUGGAAGGUAGGC	133	227	5	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7757601-7758021	Cluster_4303	Pocillopora_meandrina_HIv1___Sc0000013	7757601	7758021	421	199	84	0.010050251256281407	-	UCCGGCUCGAAGGAAACUUUU	22	121	20	34	3	14	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:7936753-7937170	Cluster_4304	Pocillopora_meandrina_HIv1___Sc0000013	7936753	7937170	418	174	28	0.040229885057471264	-	CCUGACUGGCGCCGACACA	53	171	1	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8006199-8006615	Cluster_4305	Pocillopora_meandrina_HIv1___Sc0000013	8006199	8006615	417	336	28	0.9970238095238095	+	GAGACUUGAAGCGGGU	158	325	7	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8128876-8129305	Cluster_4306	Pocillopora_meandrina_HIv1___Sc0000013	8128876	8129305	430	316	57	0.015822784810126583	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	131	2	311	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8130059-8130655	Cluster_4307	Pocillopora_meandrina_HIv1___Sc0000013	8130059	8130655	597	5625	531	0.003022222222222222	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	816	22	5549	7	7	6	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8200834-8201251	Cluster_4308	Pocillopora_meandrina_HIv1___Sc0000013	8200834	8201251	418	33775	86	5.921539600296077e-05	-	CUUGAAGCGGUUGGA	27008	33775	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8279316-8279798	Cluster_4309	Pocillopora_meandrina_HIv1___Sc0000013	8279316	8279798	483	3175	362	0.00031496062992125983	-	CAUAGACGCAAGCUCAAUACACA	1035	269	200	123	1035	1249	299	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8350706-8351129	Cluster_4310	Pocillopora_meandrina_HIv1___Sc0000013	8350706	8351129	424	369	47	1.0	+	UGUCAGUGAAGUUGAUAUGAGU	103	49	6	28	170	13	103	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8717884-8718310	Cluster_4311	Pocillopora_meandrina_HIv1___Sc0000013	8717884	8718310	427	101	36	0.0	-	AAGUAUAGCACUGUGUAUUCUUUAGGAG	16	1	92	0	0	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8718536-8719582	Cluster_4312	Pocillopora_meandrina_HIv1___Sc0000013	8718536	8719582	1047	1198	398	0.3973288814691152	.	UGAGAAUUCUGGAAUUUAUGACAACUCC	74	38	1092	11	15	14	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8784465-8784952	Cluster_4313	Pocillopora_meandrina_HIv1___Sc0000013	8784465	8784952	488	449	192	0.821826280623608	+	UAUGUGAUGCGGUGACCAGACAACGGUGGC	19	7	383	8	9	15	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:8948806-8949223	Cluster_4314	Pocillopora_meandrina_HIv1___Sc0000013	8948806	8949223	418	177	24	1.0	+	CAGCACUCUGCAAAGACG	73	166	11	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9024144-9024558	Cluster_4315	Pocillopora_meandrina_HIv1___Sc0000013	9024144	9024558	415	82	12	1.0	+	CCCCGUGUUGUAGGCG	37	78	3	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9076660-9078397	Cluster_4316	Pocillopora_meandrina_HIv1___Sc0000013	9076660	9078397	1738	2694	1117	0.04602821083890126	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	88	16	2557	6	25	43	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9180155-9180831	Cluster_4317	Pocillopora_meandrina_HIv1___Sc0000013	9180155	9180831	677	7848	543	0.003950050968399592	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2054	16	7698	4	58	34	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9180991-9181394	Cluster_4318	Pocillopora_meandrina_HIv1___Sc0000013	9180991	9181394	404	373	237	0.21179624664879357	.	UCCGAUUUUCUCAACCGCCUCUUGUC	11	11	306	2	8	16	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9261838-9262253	Cluster_4319	Pocillopora_meandrina_HIv1___Sc0000013	9261838	9262253	416	137	16	0.06569343065693431	-	CGCAGCGCGUGCCUCA	65	134	1	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9289978-9290404	Cluster_4320	Pocillopora_meandrina_HIv1___Sc0000013	9289978	9290404	427	148	30	0.9932432432432432	+	UAAUCGUUGGCUUUUUCUCGAGGCGGG	42	1	147	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9301023-9301651	Cluster_4321	Pocillopora_meandrina_HIv1___Sc0000013	9301023	9301651	629	3510	405	0.9723646723646724	+	UCGUAUUCUUUUCCAUCCUCGCCGAAC	875	24	3262	35	77	42	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9396615-9397027	Cluster_4322	Pocillopora_meandrina_HIv1___Sc0000013	9396615	9397027	413	74	12	0.013513513513513514	-	CGCGGGAUGGAGCAGC	42	74	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9512978-9513626	Cluster_4323	Pocillopora_meandrina_HIv1___Sc0000013	9512978	9513626	649	527	223	0.7020872865275142	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	37	5	484	1	4	10	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9530869-9531293	Cluster_4324	Pocillopora_meandrina_HIv1___Sc0000013	9530869	9531293	425	79	27	0.0	-	GCUUGAUGUACGCGAAAGAAAUUCGA	19	1	77	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9537092-9537506	Cluster_4325	Pocillopora_meandrina_HIv1___Sc0000013	9537092	9537506	415	82	27	1.0	+	CAUAUAUAGAGGGCUGUGG	17	56	12	4	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9653262-9653875	Cluster_4326	Pocillopora_meandrina_HIv1___Sc0000013	9653262	9653875	614	1993	358	0.053186151530356246	-	UGAGACUCUUUGAAGCGCAACCCGCACA	541	22	1894	6	4	25	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000013:9815081-9815510	Cluster_4327	Pocillopora_meandrina_HIv1___Sc0000013	9815081	9815510	430	177	57	1.0	+	AAGUGAUUAAAGAUGAGCUGAACCCAGUG	16	3	171	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:12879-13298	Cluster_4328	Pocillopora_meandrina_HIv1___Sc0000014	12879	13298	420	77	24	0.0	-	CUUGAAUCGUUUGGACUGCGCCA	22	5	0	8	23	34	7	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:45180-45605	Cluster_4329	Pocillopora_meandrina_HIv1___Sc0000014	45180	45605	426	274	184	0.3905109489051095	.	AGUGGAGACGUCGGUGA	9	124	61	37	27	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:84566-84987	Cluster_4330	Pocillopora_meandrina_HIv1___Sc0000014	84566	84987	422	401	76	0.7955112219451371	.	UGUGCAGGUAGAGCAGAGGUUA	68	71	5	120	137	55	13	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:96277-96699	Cluster_4331	Pocillopora_meandrina_HIv1___Sc0000014	96277	96699	423	399	120	0.19799498746867167	-	UUCGCGUCUGAAGCUGUUAGAGU	109	62	34	27	71	196	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:137727-138140	Cluster_4332	Pocillopora_meandrina_HIv1___Sc0000014	137727	138140	414	116	48	0.14655172413793102	-	AAUGAUUUCGGAGUGUAUGCG	19	58	0	44	7	7	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:213610-214024	Cluster_4333	Pocillopora_meandrina_HIv1___Sc0000014	213610	214024	415	121	20	0.8677685950413223	+	CAGCCUGAAAAAAAAA	63	112	3	5	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:216454-216869	Cluster_4334	Pocillopora_meandrina_HIv1___Sc0000014	216454	216869	416	1463	16	0.9986329460013671	+	GGUUGGAUCCGGCCU	1343	1462	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:420703-421117	Cluster_4335	Pocillopora_meandrina_HIv1___Sc0000014	420703	421117	415	105	26	0.009523809523809525	-	CCCUUUGACCUCAUC	48	91	11	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:428539-428967	Cluster_4336	Pocillopora_meandrina_HIv1___Sc0000014	428539	428967	429	123	33	0.0	-	UUAGUAACUUCUUGGCUAUCUUUACAGCAU	41	0	123	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:465769-467126	Cluster_4337	Pocillopora_meandrina_HIv1___Sc0000014	465769	467126	1358	1832	553	0.5813318777292577	.	UGUGUAAUCGUUCGGUGUAAUCUUGUGUU	113	18	1764	7	9	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:467823-468252	Cluster_4338	Pocillopora_meandrina_HIv1___Sc0000014	467823	468252	430	358	51	0.0	-	UUCCAUGACUCUGUUUAAACGAAAACGAAC	200	1	356	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:489494-489920	Cluster_4339	Pocillopora_meandrina_HIv1___Sc0000014	489494	489920	427	275	143	0.06545454545454546	-	UGAAUCUGGAUAUUGCUCUCCUCUUUAUGUC	25	8	255	1	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:489970-490592	Cluster_4340	Pocillopora_meandrina_HIv1___Sc0000014	489970	490592	623	785	310	0.12101910828025478	-	UUUAACACAGUUGGCUUUAUGAAUUUCCCU	35	27	726	3	9	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:512220-512756	Cluster_4341	Pocillopora_meandrina_HIv1___Sc0000014	512220	512756	537	2703	561	1.0	+	GUGAUGUAUAAUUCAGAGACAUUU	435	179	1473	111	75	151	714	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:516209-516686	Cluster_4342	Pocillopora_meandrina_HIv1___Sc0000014	516209	516686	478	270	115	1.0	+	GAGGGAAAUCAAUUCUGGAUC	26	53	64	42	25	35	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:571646-572061	Cluster_4343	Pocillopora_meandrina_HIv1___Sc0000014	571646	572061	416	199	6	0.9949748743718593	+	UGAUUUGAGGAAGUUU	157	198	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:660803-661232	Cluster_4344	Pocillopora_meandrina_HIv1___Sc0000014	660803	661232	430	87	19	0.011494252873563218	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	30	1	85	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:700707-701107	Cluster_4345	Pocillopora_meandrina_HIv1___Sc0000014	700707	701107	401	158	98	1.0	+	CAUGUGACUGAGGGGGCA	14	86	20	25	10	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:701482-702107	Cluster_4346	Pocillopora_meandrina_HIv1___Sc0000014	701482	702107	626	4868	842	0.9960969597370584	+	AAUUCGUAGUGGUAUUCUGAUGUGA	214	1682	1848	266	251	387	434	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:764543-764990	Cluster_4347	Pocillopora_meandrina_HIv1___Sc0000014	764543	764990	448	2641	251	0.9996213555471413	+	UAGGGCUGAGAUGAAGU	297	1190	593	67	307	85	399	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:772532-772947	Cluster_4348	Pocillopora_meandrina_HIv1___Sc0000014	772532	772947	416	155	2	1.0	+	CGAGUUAGAUAGAAUA	153	155	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:779972-780389	Cluster_4349	Pocillopora_meandrina_HIv1___Sc0000014	779972	780389	418	758	37	0.0	-	AAUUGCAGAAUUCAGU	240	758	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:792680-793094	Cluster_4350	Pocillopora_meandrina_HIv1___Sc0000014	792680	793094	415	345	12	0.9971014492753624	+	GAAUCGGCCGUGGGU	320	345	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:805528-805955	Cluster_4351	Pocillopora_meandrina_HIv1___Sc0000014	805528	805955	428	321	110	0.7975077881619937	.	UUUUGUAUCUGGAUUCCUUGACAUCU	39	13	274	5	3	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:838169-838597	Cluster_4352	Pocillopora_meandrina_HIv1___Sc0000014	838169	838597	429	146	68	0.00684931506849315	-	UCUUUCGUCUGUUGUCGAUAAAUGAGAGC	30	1	144	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:881327-881750	Cluster_4353	Pocillopora_meandrina_HIv1___Sc0000014	881327	881750	424	301	48	0.08970099667774087	-	UGUGACAAGAUUUUUCCUGAUGU	103	4	20	5	16	161	95	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1099106-1099729	Cluster_4354	Pocillopora_meandrina_HIv1___Sc0000014	1099106	1099729	624	926	379	0.03131749460043196	-	UAAAGUAUCAUUCCUCGUCACGAACCCG	32	14	890	4	2	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1099751-1100428	Cluster_4355	Pocillopora_meandrina_HIv1___Sc0000014	1099751	1100428	678	620	321	0.15	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	38	8	543	2	1	11	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1100711-1101459	Cluster_4356	Pocillopora_meandrina_HIv1___Sc0000014	1100711	1101459	749	782	236	0.020460358056265986	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	72	4	757	5	3	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1121523-1121948	Cluster_4357	Pocillopora_meandrina_HIv1___Sc0000014	1121523	1121948	426	189	81	0.7883597883597884	.	AAUUGACUGCUUUGAGAUUUUUAUUGAGA	31	0	186	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1134417-1135055	Cluster_4358	Pocillopora_meandrina_HIv1___Sc0000014	1134417	1135055	639	561	281	0.5650623885918004	.	CAGGUUCUGAGCCUUCUGACUGACCAGGUC	61	17	520	8	6	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1307073-1307488	Cluster_4359	Pocillopora_meandrina_HIv1___Sc0000014	1307073	1307488	416	143	73	0.958041958041958	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	18	0	138	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1451321-1451767	Cluster_4360	Pocillopora_meandrina_HIv1___Sc0000014	1451321	1451767	447	492	83	0.5304878048780488	.	UCGGUUAUAAGACGCACCCUGAAUUUUU	155	4	484	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1452037-1452460	Cluster_4361	Pocillopora_meandrina_HIv1___Sc0000014	1452037	1452460	424	120	19	0.05	-	UUAACUGGUAGUCAUGACGUCUCC	40	12	14	0	1	4	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1658721-1659133	Cluster_4362	Pocillopora_meandrina_HIv1___Sc0000014	1658721	1659133	413	185	80	0.9405405405405406	+	UGUAGACGUUUGAUCAGUAUAUCAUGAU	12	3	179	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1698695-1699129	Cluster_4363	Pocillopora_meandrina_HIv1___Sc0000014	1698695	1699129	435	534	81	0.9794007490636704	+	UCAGUAGAACACAACUGUCAAGAAGCCACA	178	29	496	3	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1701276-1701705	Cluster_4364	Pocillopora_meandrina_HIv1___Sc0000014	1701276	1701705	430	203	51	1.0	+	UGGAGACUGUUUCAAUUUCUCAUCGAAAUA	89	3	190	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1705301-1705712	Cluster_4365	Pocillopora_meandrina_HIv1___Sc0000014	1705301	1705712	412	119	56	1.0	+	UCCGAUGUCCAUGUCAUGAUUAACAGAAG	15	0	116	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1708938-1710452	Cluster_4366	Pocillopora_meandrina_HIv1___Sc0000014	1708938	1710452	1515	3314	623	0.9969824984912492	+	UAAUAGAAUUUUCAUCAACUUCAAGAGU	674	49	3217	13	12	16	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1715489-1716086	Cluster_4367	Pocillopora_meandrina_HIv1___Sc0000014	1715489	1716086	598	660	232	0.9939393939393939	+	UGAAGUCCAGAUCAUCUUGCUGUAGAAGUU	190	15	630	2	6	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1718254-1718659	Cluster_4368	Pocillopora_meandrina_HIv1___Sc0000014	1718254	1718659	406	100	38	1.0	+	UCCGAUACUGAACACUCCGAUCACUG	25	1	98	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1719216-1719771	Cluster_4369	Pocillopora_meandrina_HIv1___Sc0000014	1719216	1719771	556	1066	232	0.99812382739212	+	GGCUUCUAGGACUUCUAUGUGGAUGGCU	98	15	984	6	21	19	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1720058-1720588	Cluster_4370	Pocillopora_meandrina_HIv1___Sc0000014	1720058	1720588	531	458	134	0.9890829694323144	+	UGAAUUCUCUGACCAAGACGAUAAGAUUGGC	101	14	408	0	0	33	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1721685-1722209	Cluster_4371	Pocillopora_meandrina_HIv1___Sc0000014	1721685	1722209	525	343	146	0.9970845481049563	+	UGCUUUAUCUCUAGAGCCAUGAACUUGAAG	29	6	323	0	4	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1725116-1725540	Cluster_4372	Pocillopora_meandrina_HIv1___Sc0000014	1725116	1725540	425	173	72	1.0	+	UGUAUCUGUAGUGCAUCCUUCGAUUGAGU	16	0	167	2	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1726852-1727274	Cluster_4373	Pocillopora_meandrina_HIv1___Sc0000014	1726852	1727274	423	134	49	0.9925373134328358	+	UGCAAGUUCUGGUUUGGUUUUGUUUGAAUC	41	3	128	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1730237-1730740	Cluster_4374	Pocillopora_meandrina_HIv1___Sc0000014	1730237	1730740	504	2076	431	0.9975915221579962	+	UCUUCUCGAUCUGGCUAAAGUCUGUGUC	190	12	2022	4	3	7	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1736983-1737940	Cluster_4375	Pocillopora_meandrina_HIv1___Sc0000014	1736983	1737940	958	1798	417	0.9888765294771968	+	UGGAAUUGGUAGUUCAUUAAAAGCAGGUG	201	20	1692	3	8	12	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1740024-1742285	Cluster_4376	Pocillopora_meandrina_HIv1___Sc0000014	1740024	1742285	2262	6726	2209	0.9234314600059471	+	UAUGUACGAUUUUAACUGGAAGAAACGUU	162	143	6271	24	44	88	156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1750909-1751877	Cluster_4377	Pocillopora_meandrina_HIv1___Sc0000014	1750909	1751877	969	864	332	0.8240740740740741	+	UGUUCCAAUAUUUUUCGGUCGAGAUCCACU	50	69	743	21	10	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1751983-1752677	Cluster_4378	Pocillopora_meandrina_HIv1___Sc0000014	1751983	1752677	695	2005	506	0.8812967581047382	+	UGUAUGGUUUCUGCUCGUUCUCUCCACA	382	55	1808	14	19	54	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1753796-1754299	Cluster_4379	Pocillopora_meandrina_HIv1___Sc0000014	1753796	1754299	504	1606	128	0.9987546699875467	+	UCAACCAAGCCUUAGAUCAUUCAGUCUGGG	227	7	1575	2	7	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1761367-1762938	Cluster_4380	Pocillopora_meandrina_HIv1___Sc0000014	1761367	1762938	1572	2231	964	0.9224562976243836	+	UAGGAUCAUAGUCUUUGAACUCCGACGG	90	23	2026	10	14	86	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1763494-1764344	Cluster_4381	Pocillopora_meandrina_HIv1___Sc0000014	1763494	1764344	851	1508	491	0.9038461538461539	+	UGAUUUAUAGGAGUAAUGAGACAUUAU	126	21	1389	23	24	18	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1766207-1766705	Cluster_4382	Pocillopora_meandrina_HIv1___Sc0000014	1766207	1766705	499	785	166	0.9057324840764331	+	UGCAUCAUCGAUUCGUAAACUGUGCCAAUG	229	6	754	0	4	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1770787-1771217	Cluster_4383	Pocillopora_meandrina_HIv1___Sc0000014	1770787	1771217	431	598	83	0.9899665551839465	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	273	7	585	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1775331-1775777	Cluster_4384	Pocillopora_meandrina_HIv1___Sc0000014	1775331	1775777	447	1004	155	0.896414342629482	+	UGUAGAGGAGAACACAUACAAAACCAAGAUG	354	20	967	2	1	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1778202-1778631	Cluster_4385	Pocillopora_meandrina_HIv1___Sc0000014	1778202	1778631	430	337	50	0.9970326409495549	+	UUCCAUGACUCUGUUUAAACGAAAACGAAC	214	3	334	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1779599-1780028	Cluster_4386	Pocillopora_meandrina_HIv1___Sc0000014	1779599	1780028	430	156	49	0.9807692307692307	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	19	1	155	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1780553-1780998	Cluster_4387	Pocillopora_meandrina_HIv1___Sc0000014	1780553	1780998	446	453	198	0.8145695364238411	+	UAUGACGUUCCAGAAUCUUUGACAAAA	31	7	426	2	3	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1781168-1781905	Cluster_4388	Pocillopora_meandrina_HIv1___Sc0000014	1781168	1781905	738	849	312	0.9352179034157833	+	UCCGUGACACAACGACUUUGCCUUGCUU	115	4	823	2	0	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1786396-1786797	Cluster_4389	Pocillopora_meandrina_HIv1___Sc0000014	1786396	1786797	402	184	86	0.6793478260869565	.	UGAGCUUCUAACAUUGGCAACAAACCAGA	22	3	167	0	2	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1788267-1788696	Cluster_4390	Pocillopora_meandrina_HIv1___Sc0000014	1788267	1788696	430	334	39	0.9970059880239521	+	UGUAAUCGUAACGUUCUUUCAUGAUAAA	62	5	324	1	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1791429-1791857	Cluster_4391	Pocillopora_meandrina_HIv1___Sc0000014	1791429	1791857	429	114	49	0.9912280701754386	+	GGGUUCAAGGAUUUUAGUGAACAGCCUAGGG	13	1	108	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1792562-1793419	Cluster_4392	Pocillopora_meandrina_HIv1___Sc0000014	1792562	1793419	858	516	207	0.9903100775193798	+	UCCUGAACCUGUUGGAAAGCCAAAUCCAC	39	9	493	4	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1795668-1796092	Cluster_4393	Pocillopora_meandrina_HIv1___Sc0000014	1795668	1796092	425	187	82	0.9946524064171123	+	UGAUGUUGUUGGGAUGAAGUCUUCAAUG	32	4	180	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1796852-1797272	Cluster_4394	Pocillopora_meandrina_HIv1___Sc0000014	1796852	1797272	421	197	95	1.0	+	UCUGAUCUGUCACGGAUGUGGUGUACGC	22	2	193	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1798773-1799502	Cluster_4395	Pocillopora_meandrina_HIv1___Sc0000014	1798773	1799502	730	671	99	0.9687034277198212	+	UGAUUGAUAAACCGGAUGCUGUAGACGU	381	9	654	4	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1799524-1799972	Cluster_4396	Pocillopora_meandrina_HIv1___Sc0000014	1799524	1799972	449	1256	150	0.1982484076433121	-	AAGUAAACGAGGUGUUUAAUGUGCGACUCC	437	30	1197	2	0	8	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1800448-1801044	Cluster_4397	Pocillopora_meandrina_HIv1___Sc0000014	1800448	1801044	597	543	259	0.7237569060773481	.	UACACACUCUCCAGGUUUCAAGUUCUUC	20	22	479	4	7	13	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1814534-1816168	Cluster_4398	Pocillopora_meandrina_HIv1___Sc0000014	1814534	1816168	1635	3159	934	0.9924026590693258	+	UGAAUCUCAUCUUAUCUUCUACUUCAACAUC	184	78	2991	25	11	17	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1816807-1817307	Cluster_4399	Pocillopora_meandrina_HIv1___Sc0000014	1816807	1817307	501	265	113	0.9320754716981132	+	UGAUAUUGUACAAUCUGGCUUUUUUUGAC	41	6	234	2	3	11	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1819526-1820201	Cluster_4400	Pocillopora_meandrina_HIv1___Sc0000014	1819526	1820201	676	240	136	0.9875	+	UCUUUAUGGAUCUAUGCUUUUGCGACACAAA	9	5	226	1	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1823340-1825380	Cluster_4401	Pocillopora_meandrina_HIv1___Sc0000014	1823340	1825380	2041	6789	1654	0.5177493003387833	.	AAAUCUCCUAAAUCUUUGACACAAAUAGA	344	96	5585	44	139	464	461	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1835687-1836563	Cluster_4402	Pocillopora_meandrina_HIv1___Sc0000014	1835687	1836563	877	1317	395	0.5520121488230828	.	UACGUUGCUUGACCUCAUCAUUUUUGG	80	18	1249	12	4	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1839328-1839753	Cluster_4403	Pocillopora_meandrina_HIv1___Sc0000014	1839328	1839753	426	104	29	0.9903846153846154	+	UGUGUAGAUAUGUCUUUUGGACAGGA	33	0	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1849056-1849484	Cluster_4404	Pocillopora_meandrina_HIv1___Sc0000014	1849056	1849484	429	138	42	0.9130434782608695	+	UUGGAUUUGCGUAAAAAAGUAAAAAAUGC	62	0	135	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1849835-1850267	Cluster_4405	Pocillopora_meandrina_HIv1___Sc0000014	1849835	1850267	433	308	112	0.9707792207792207	+	UUAGACGAUCUAGCUUCUGACUUGGUAGA	17	4	298	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1858886-1859308	Cluster_4406	Pocillopora_meandrina_HIv1___Sc0000014	1858886	1859308	423	152	96	0.7894736842105263	.	UAACACUAUAAACAUUCUGAGGGCGAUU	10	0	131	2	7	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1859321-1859749	Cluster_4407	Pocillopora_meandrina_HIv1___Sc0000014	1859321	1859749	429	171	90	0.9064327485380117	+	UAAUGAACGUAUAGCCAUCCAGUUGAACU	13	1	165	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1872858-1873286	Cluster_4408	Pocillopora_meandrina_HIv1___Sc0000014	1872858	1873286	429	225	85	0.9911111111111112	+	UAGGAUGUAUCUGGACGUGUUCUGCACAGU	48	6	215	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1893198-1893619	Cluster_4409	Pocillopora_meandrina_HIv1___Sc0000014	1893198	1893619	422	177	28	1.0	+	AAGACUACAAAUUGCACAUGCC	64	15	3	20	106	31	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1980438-1980863	Cluster_4410	Pocillopora_meandrina_HIv1___Sc0000014	1980438	1980863	426	146	84	0.8904109589041096	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	17	1	132	2	0	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1981951-1982375	Cluster_4411	Pocillopora_meandrina_HIv1___Sc0000014	1981951	1982375	425	131	69	0.916030534351145	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	17	1	121	0	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1982864-1983267	Cluster_4412	Pocillopora_meandrina_HIv1___Sc0000014	1982864	1983267	404	145	86	0.8206896551724138	+	UACUGGAAUAAUAACUUUACGAUCAACA	14	1	137	2	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:1983712-1984120	Cluster_4413	Pocillopora_meandrina_HIv1___Sc0000014	1983712	1984120	409	128	77	0.8671875	+	UGCUUGUGACUUAAGUUGUCGUUCUUCU	12	3	115	1	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2079375-2079803	Cluster_4414	Pocillopora_meandrina_HIv1___Sc0000014	2079375	2079803	429	344	49	0.011627906976744186	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	252	0	340	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2079926-2080341	Cluster_4415	Pocillopora_meandrina_HIv1___Sc0000014	2079926	2080341	416	182	111	0.5934065934065934	.	AAUUACCUGAUUUCGAUUUUCGUCA	13	4	154	1	3	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2108222-2108653	Cluster_4416	Pocillopora_meandrina_HIv1___Sc0000014	2108222	2108653	432	265	70	1.0	+	AUGGAUGAUGAGAAGGAGAUGCUCUGAGG	57	96	150	10	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2117322-2117735	Cluster_4417	Pocillopora_meandrina_HIv1___Sc0000014	2117322	2117735	414	122	69	0.11475409836065574	-	UCCGUGACUUGAUGGAGAACGAAUAAUUCG	15	6	110	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2174421-2174836	Cluster_4418	Pocillopora_meandrina_HIv1___Sc0000014	2174421	2174836	416	216	18	1.0	+	CUUGAGGCGGUUGGA	87	216	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2179577-2180006	Cluster_4419	Pocillopora_meandrina_HIv1___Sc0000014	2179577	2180006	430	205	52	0.8585365853658536	+	UAAUCGUUGGCUUUUUCUCGAGACGUGAGC	75	5	199	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2259035-2259461	Cluster_4420	Pocillopora_meandrina_HIv1___Sc0000014	2259035	2259461	427	211	110	0.2985781990521327	.	UUCAAUCUGAUCCGUGUAACUGGGACUU	13	5	161	14	12	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2338664-2339079	Cluster_4421	Pocillopora_meandrina_HIv1___Sc0000014	2338664	2339079	416	84	11	0.0	-	GUGGAUUGGCCCAGCA	73	83	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2365859-2366281	Cluster_4422	Pocillopora_meandrina_HIv1___Sc0000014	2365859	2366281	423	1413	73	0.0007077140835102619	-	AUUUUUAGCCCGCGGAAGUUGC	624	104	1	96	906	296	10	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2594743-2594833	Cluster_4423	Pocillopora_meandrina_HIv1___Sc0000014	2594743	2594833	91	330	48	0.996969696969697	+	CGUGGUGCGUUAUUGUUUCGGU	53	67	0	16	164	48	35	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000014:2614195-2614659	Cluster_4424	Pocillopora_meandrina_HIv1___Sc0000014	2614195	2614659	465	374	234	1.0	+	GGACAUGUCGGCACA	12	140	120	41	29	15	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2639140-2639553	Cluster_4425	Pocillopora_meandrina_HIv1___Sc0000014	2639140	2639553	414	88	8	0.0	-	UUUCCGAGGUCGCGA	44	88	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2712648-2713129	Cluster_4426	Pocillopora_meandrina_HIv1___Sc0000014	2712648	2713129	482	6796	345	0.9952913478516775	+	GGCGCCGUAGCUCAGUUGG	1833	6620	41	51	12	52	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2718186-2718608	Cluster_4427	Pocillopora_meandrina_HIv1___Sc0000014	2718186	2718608	423	282	198	0.010638297872340425	-	GACGUGUACAUAGAAGAGACAGAUU	8	87	132	19	14	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2733241-2733652	Cluster_4428	Pocillopora_meandrina_HIv1___Sc0000014	2733241	2733652	412	84	25	0.011904761904761904	-	UUCGAAGAGUCGGGC	50	78	2	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:2765844-2766270	Cluster_4429	Pocillopora_meandrina_HIv1___Sc0000014	2765844	2766270	427	133	25	0.007518796992481203	-	UACCGAUUUAUAAGUGAGCAGCUCUAG	30	2	129	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3044176-3044590	Cluster_4430	Pocillopora_meandrina_HIv1___Sc0000014	3044176	3044590	415	213	27	0.009389671361502348	-	CAACUUUUGACGGUA	117	213	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3098235-3098724	Cluster_4431	Pocillopora_meandrina_HIv1___Sc0000014	3098235	3098724	490	566	151	0.0017667844522968198	-	GGGAUGAAUGGGAAUCUUCUCUCUGAGCAUA	104	49	424	9	12	24	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3098874-3099419	Cluster_4432	Pocillopora_meandrina_HIv1___Sc0000014	3098874	3099419	546	621	236	0.0853462157809984	-	GGGAUGAAUGGGAAUCUUCUCUCUGAGCAUA	89	42	442	17	27	46	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3127143-3127559	Cluster_4433	Pocillopora_meandrina_HIv1___Sc0000014	3127143	3127559	417	3060	29	1.0	+	AACUUUUGACGGUGA	2471	3060	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3282437-3282865	Cluster_4434	Pocillopora_meandrina_HIv1___Sc0000014	3282437	3282865	429	95	32	0.9789473684210527	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	0	93	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3337472-3337897	Cluster_4435	Pocillopora_meandrina_HIv1___Sc0000014	3337472	3337897	426	178	70	0.0056179775280898875	-	UUUGAUUGACGUACGGUAUUUGAGACGC	21	4	168	1	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3440063-3440478	Cluster_4436	Pocillopora_meandrina_HIv1___Sc0000014	3440063	3440478	416	100	45	0.88	+	UGUAUUCUGCUACUGGUUCUCCCGAGC	32	3	93	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3441053-3441973	Cluster_4437	Pocillopora_meandrina_HIv1___Sc0000014	3441053	3441973	921	890	313	0.9595505617977528	+	UAUUCGCCGAUGAGGAUAUUCUUUGCCCUUU	51	8	828	5	14	11	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3513949-3514372	Cluster_4438	Pocillopora_meandrina_HIv1___Sc0000014	3513949	3514372	424	337	206	0.011869436201780416	-	CUCGUUGUGUGUGUA	15	141	120	12	14	21	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3515780-3516194	Cluster_4439	Pocillopora_meandrina_HIv1___Sc0000014	3515780	3516194	415	190	104	0.0	-	UCCCUCCGGUGCCUCCU	24	126	33	5	11	9	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3554588-3555007	Cluster_4440	Pocillopora_meandrina_HIv1___Sc0000014	3554588	3555007	420	183	39	0.16393442622950818	-	UCUGACGAAGGGCUGACA	47	98	0	67	17	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3717108-3717591	Cluster_4441	Pocillopora_meandrina_HIv1___Sc0000014	3717108	3717591	484	1750	269	0.9954285714285714	+	GGUAGCGUGGCCGAGC	737	1573	45	57	45	20	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3844744-3845165	Cluster_4442	Pocillopora_meandrina_HIv1___Sc0000014	3844744	3845165	422	114	23	0.9736842105263158	+	UGGGCUGAAAUCAUACACGUGAU	25	7	2	29	31	29	16	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:3912992-3913410	Cluster_4443	Pocillopora_meandrina_HIv1___Sc0000014	3912992	3913410	419	81	8	0.07407407407407407	-	AACGAAGUACAAGUGGUAA	74	76	2	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4130670-4131077	Cluster_4444	Pocillopora_meandrina_HIv1___Sc0000014	4130670	4131077	408	96	49	0.5833333333333334	.	UAGGUAAAGUCUUUCUGUUAACAGAGUU	12	6	83	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4138466-4139487	Cluster_4445	Pocillopora_meandrina_HIv1___Sc0000014	4138466	4139487	1022	770	584	0.005194805194805195	-	GAUCUGACUGACUACCUCAUGAA	7	235	312	55	52	62	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4140341-4140745	Cluster_4446	Pocillopora_meandrina_HIv1___Sc0000014	4140341	4140745	405	314	228	0.006369426751592357	-	GACGAAGACGUUGCUGCU	6	147	64	32	19	27	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4288485-4288910	Cluster_4447	Pocillopora_meandrina_HIv1___Sc0000014	4288485	4288910	426	169	42	0.30177514792899407	.	AGGGACUGAAACAUCGACUGAAGACG	36	2	144	3	0	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4558169-4559414	Cluster_4448	Pocillopora_meandrina_HIv1___Sc0000014	4558169	4559414	1246	1237	503	0.09781729991915926	-	UACAAACUGCAAAACGGUCUCACCUGGU	98	18	1157	6	8	13	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4559645-4560080	Cluster_4449	Pocillopora_meandrina_HIv1___Sc0000014	4559645	4560080	436	1286	291	0.04665629860031104	-	UGAUCUGUCGUGACUCUGAAUUAAGUUC	157	40	1190	3	6	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4560279-4560706	Cluster_4450	Pocillopora_meandrina_HIv1___Sc0000014	4560279	4560706	428	139	46	0.06474820143884892	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	65	1	130	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4560790-4561216	Cluster_4451	Pocillopora_meandrina_HIv1___Sc0000014	4560790	4561216	427	300	121	0.08333333333333333	-	UCCAAUCACACACAGUUCUCCUGCGGC	75	3	285	2	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4561591-4562018	Cluster_4452	Pocillopora_meandrina_HIv1___Sc0000014	4561591	4562018	428	245	126	0.05714285714285714	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	25	0	233	0	0	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4658496-4658911	Cluster_4453	Pocillopora_meandrina_HIv1___Sc0000014	4658496	4658911	416	562	25	0.99644128113879	+	GUUCUAUUUUGUUGAU	378	556	0	0	3	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4664447-4664868	Cluster_4454	Pocillopora_meandrina_HIv1___Sc0000014	4664447	4664868	422	120	68	0.95	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	16	0	114	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4665960-4666384	Cluster_4455	Pocillopora_meandrina_HIv1___Sc0000014	4665960	4666384	425	126	76	0.873015873015873	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	11	2	114	1	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4666873-4667276	Cluster_4456	Pocillopora_meandrina_HIv1___Sc0000014	4666873	4667276	404	144	83	0.8958333333333334	+	UAAAUCUCUCGGGUCAAUACAGAUGCGUA	16	3	138	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4684320-4684737	Cluster_4457	Pocillopora_meandrina_HIv1___Sc0000014	4684320	4684737	418	159	110	0.9937106918238994	+	UGGUGCCAGCAAUGUAGACU	7	33	63	19	13	19	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4686843-4687244	Cluster_4458	Pocillopora_meandrina_HIv1___Sc0000014	4686843	4687244	402	117	87	0.9829059829059829	+	AGUGAAUGGGGUGGAACUGCU	4	40	39	13	9	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4687373-4687774	Cluster_4459	Pocillopora_meandrina_HIv1___Sc0000014	4687373	4687774	402	368	269	1.0	+	GCCGUGAAUGGACUGACACUA	10	174	97	33	14	30	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4812850-4813466	Cluster_4460	Pocillopora_meandrina_HIv1___Sc0000014	4812850	4813466	617	555	239	0.7045045045045045	.	AAAGAGCUGAAAAAAAGAAUGUUUC	132	32	456	9	6	15	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4814569-4814996	Cluster_4461	Pocillopora_meandrina_HIv1___Sc0000014	4814569	4814996	428	102	10	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	71	0	101	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4815922-4816551	Cluster_4462	Pocillopora_meandrina_HIv1___Sc0000014	4815922	4816551	630	3201	282	0.15089034676663543	-	UUGAAUGUUGCGAAGCUCUUUGUCCAAA	1093	34	3029	5	16	74	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:4993243-4993667	Cluster_4463	Pocillopora_meandrina_HIv1___Sc0000014	4993243	4993667	425	89	34	0.033707865168539325	-	UGUGUAGAUAUGUCUUUUGGACAGGA	29	1	88	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5029629-5030045	Cluster_4464	Pocillopora_meandrina_HIv1___Sc0000014	5029629	5030045	417	293	16	0.0	-	GAGACUUGAAGCGGC	103	293	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5048490-5048913	Cluster_4465	Pocillopora_meandrina_HIv1___Sc0000014	5048490	5048913	424	525	49	0.0	-	UCUCAUAAAGAGCGUAAAGGGGC	252	14	26	7	16	409	53	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5075503-5075932	Cluster_4466	Pocillopora_meandrina_HIv1___Sc0000014	5075503	5075932	430	454	171	0.0	-	GUUUAUGAUGACAUACAGAUCUGAAA	78	103	293	14	9	25	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5082611-5083021	Cluster_4467	Pocillopora_meandrina_HIv1___Sc0000014	5082611	5083021	411	116	80	1.0	+	CUUGUUAUCCAGGACAAAGAGAAGGCU	6	28	54	3	12	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5297933-5298348	Cluster_4468	Pocillopora_meandrina_HIv1___Sc0000014	5297933	5298348	416	109	39	0.0	-	GCCGGUCUGCCGCGAU	34	92	9	3	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5335148-5335674	Cluster_4469	Pocillopora_meandrina_HIv1___Sc0000014	5335148	5335674	527	921	412	0.010857763300760043	-	GUUUCUACUGUUUGCCUGUCAAU	26	192	481	31	47	63	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5357271-5357697	Cluster_4470	Pocillopora_meandrina_HIv1___Sc0000014	5357271	5357697	427	181	106	0.08839779005524862	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	22	3	168	1	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5380501-5380918	Cluster_4471	Pocillopora_meandrina_HIv1___Sc0000014	5380501	5380918	418	319	17	0.006269592476489028	-	CUGGAGUCUCGGCUU	153	318	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5520891-5521316	Cluster_4472	Pocillopora_meandrina_HIv1___Sc0000014	5520891	5521316	426	2178	52	0.9977043158861341	+	CGGCCUGAAAAAAAAAAAA	502	1338	555	109	66	48	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5733165-5733582	Cluster_4473	Pocillopora_meandrina_HIv1___Sc0000014	5733165	5733582	418	125	52	0.408	.	UGAGCCGAUCCUGACGCAGCA	34	33	17	43	20	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5823677-5824090	Cluster_4474	Pocillopora_meandrina_HIv1___Sc0000014	5823677	5824090	414	88	20	0.9545454545454546	+	CACAAAAGGUGUUGGU	20	88	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5977392-5977814	Cluster_4475	Pocillopora_meandrina_HIv1___Sc0000014	5977392	5977814	423	90	40	0.9111111111111111	+	UGUACUGUUUGUAUUUUUUUUCCUGGGC	16	1	86	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5985949-5987920	Cluster_4476	Pocillopora_meandrina_HIv1___Sc0000014	5985949	5987920	1972	5675	1541	0.9390308370044053	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	480	42	5429	23	20	48	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:5988456-5988881	Cluster_4477	Pocillopora_meandrina_HIv1___Sc0000014	5988456	5988881	426	243	106	0.9958847736625515	+	UAUUAUACUGCGGGUUACUCAGCCAAGC	18	3	235	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6025672-6026087	Cluster_4478	Pocillopora_meandrina_HIv1___Sc0000014	6025672	6026087	416	284	8	0.9859154929577465	+	GGGACUGUAGUUCAAC	262	281	2	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6048618-6049034	Cluster_4479	Pocillopora_meandrina_HIv1___Sc0000014	6048618	6049034	417	430	17	0.0069767441860465115	-	GAUGGAUGGAGACUGCG	413	425	3	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6119359-6119778	Cluster_4480	Pocillopora_meandrina_HIv1___Sc0000014	6119359	6119778	420	204	92	0.6568627450980392	.	AAGCCUGUUUCGUGAAUCGCA	33	119	6	70	6	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6393303-6393732	Cluster_4481	Pocillopora_meandrina_HIv1___Sc0000014	6393303	6393732	430	231	65	1.0	+	UGCAUAGUGCAGCAAAUUCCAUC	34	13	102	5	32	60	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6491369-6491793	Cluster_4482	Pocillopora_meandrina_HIv1___Sc0000014	6491369	6491793	425	200	79	0.99	+	CUCUAUGAAAGAUUUGCACACAAUU	62	16	113	11	10	14	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6570607-6571538	Cluster_4483	Pocillopora_meandrina_HIv1___Sc0000014	6570607	6571538	932	901	280	0.9544950055493896	+	AGAACUUGGAGGAGCAAAAAGAAUUCCA	75	35	763	23	14	36	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6641266-6641681	Cluster_4484	Pocillopora_meandrina_HIv1___Sc0000014	6641266	6641681	416	260	13	0.9884615384615385	+	GCGGAACUGGCGGAAU	110	259	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6659357-6659784	Cluster_4485	Pocillopora_meandrina_HIv1___Sc0000014	6659357	6659784	428	147	62	0.21768707482993196	.	GCGUUUAAAUUCUCUUCUGGCUCCCAGG	37	5	132	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6660037-6660525	Cluster_4486	Pocillopora_meandrina_HIv1___Sc0000014	6660037	6660525	489	2091	260	0.711142993782879	.	UUUGGGAUCAAAGACGAAACGAGU	443	34	776	154	28	313	786	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:6909065-6910206	Cluster_4487	Pocillopora_meandrina_HIv1___Sc0000014	6909065	6910206	1142	15293	1287	0.019486039364415092	-	UUUGUAGGCUCUAACAGUACAUUGUU	4278	1452	13557	46	40	59	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7024208-7024732	Cluster_4488	Pocillopora_meandrina_HIv1___Sc0000014	7024208	7024732	525	2621	438	0.9557420831743609	+	UGCUUGAAUUCUGCCGAACUGUACUGC	832	21	2497	4	9	44	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7025303-7026004	Cluster_4489	Pocillopora_meandrina_HIv1___Sc0000014	7025303	7026004	702	264	139	0.9015151515151515	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	28	4	247	1	6	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7027233-7027663	Cluster_4490	Pocillopora_meandrina_HIv1___Sc0000014	7027233	7027663	431	285	148	0.8631578947368421	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	39	4	256	1	4	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7060991-7061421	Cluster_4491	Pocillopora_meandrina_HIv1___Sc0000014	7060991	7061421	431	1004	130	0.00099601593625498	-	UCCGUACUUAAAAUCCCUCACAUUGACUGU	417	25	964	4	5	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7087511-7087930	Cluster_4492	Pocillopora_meandrina_HIv1___Sc0000014	7087511	7087930	420	129	58	0.1937984496124031	-	UCUUGAAGCGUUAUCUGCCGGUCUGCC	10	18	102	6	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7166952-7167381	Cluster_4493	Pocillopora_meandrina_HIv1___Sc0000014	7166952	7167381	430	17383	297	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCC	4095	65	17227	11	20	17	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7171665-7172105	Cluster_4494	Pocillopora_meandrina_HIv1___Sc0000014	7171665	7172105	441	1078	188	0.05380333951762523	-	UUUACAACGUCCGGCUUGACCAUUUACA	123	21	1005	7	8	16	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7209425-7209861	Cluster_4495	Pocillopora_meandrina_HIv1___Sc0000014	7209425	7209861	437	7062	249	0.0	-	UCUUGAAGCGUUAUCUGCUGGUCUGCCUG	2429	23	7031	2	3	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7239259-7239676	Cluster_4496	Pocillopora_meandrina_HIv1___Sc0000014	7239259	7239676	418	126	24	0.7063492063492064	.	GAAACUGCGAAUGGCA	30	105	1	4	5	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7247934-7248428	Cluster_4497	Pocillopora_meandrina_HIv1___Sc0000014	7247934	7248428	495	276	85	0.927536231884058	+	UGAUGCAAUCUGUUUCUGCAUGAGGGC	45	0	266	0	5	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7249050-7249473	Cluster_4498	Pocillopora_meandrina_HIv1___Sc0000014	7249050	7249473	424	161	82	0.9130434782608695	+	UAUUUUCAAACUGCGACGAUUGCUUCUGA	30	3	151	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7351086-7351515	Cluster_4499	Pocillopora_meandrina_HIv1___Sc0000014	7351086	7351515	430	153	39	0.006535947712418301	-	CUCUCUCGAACAUUUUACUAUUUAGGUA	30	6	140	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7462664-7463081	Cluster_4500	Pocillopora_meandrina_HIv1___Sc0000014	7462664	7463081	418	133	22	0.0	-	GGAAUUGGUAGACGCGCU	50	132	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7526838-7527264	Cluster_4501	Pocillopora_meandrina_HIv1___Sc0000014	7526838	7527264	427	194	104	0.8969072164948454	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	22	0	181	2	2	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7560462-7560889	Cluster_4502	Pocillopora_meandrina_HIv1___Sc0000014	7560462	7560889	428	113	36	0.9911504424778761	+	UGUGCCAAAGGUUUAGAACGAAAGAACG	27	1	110	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:7822908-7823325	Cluster_4503	Pocillopora_meandrina_HIv1___Sc0000014	7822908	7823325	418	1061	18	0.9962299717247879	+	CUGAGAUUGCUGUAGGCU	525	1061	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8090277-8090759	Cluster_4504	Pocillopora_meandrina_HIv1___Sc0000014	8090277	8090759	483	2566	634	0.9988308651597818	+	ACUGGGAGAGAAUCAAACUGAUGCUU	217	569	1362	111	101	298	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8094498-8094979	Cluster_4505	Pocillopora_meandrina_HIv1___Sc0000014	8094498	8094979	482	607	190	1.0	+	ACUGGGAGAGAAUCAAACUGAUGGU	33	83	286	51	63	51	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8096153-8096633	Cluster_4506	Pocillopora_meandrina_HIv1___Sc0000014	8096153	8096633	481	407	235	0.9926289926289926	+	CUAGGAGAGAAUCCAGCUGAUGCUC	19	104	201	18	27	21	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8097363-8097787	Cluster_4507	Pocillopora_meandrina_HIv1___Sc0000014	8097363	8097787	425	225	97	0.9955555555555555	+	AACCUCCUAAGUAAAUAACACCACU	22	42	110	18	15	22	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8099444-8099927	Cluster_4508	Pocillopora_meandrina_HIv1___Sc0000014	8099444	8099927	484	516	252	0.9961240310077519	+	AACCUCCUUCUUGGCAUCGCUGCAUGA	35	128	242	46	39	23	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8105938-8106354	Cluster_4509	Pocillopora_meandrina_HIv1___Sc0000014	8105938	8106354	417	185	11	0.9891891891891892	+	UGCUACGAUCUUCUGAA	96	183	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8120360-8120776	Cluster_4510	Pocillopora_meandrina_HIv1___Sc0000014	8120360	8120776	417	100	7	0.98	+	UGGAAGAGGUCCUGGAUU	55	99	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8244722-8247613	Cluster_4511	Pocillopora_meandrina_HIv1___Sc0000014	8244722	8247613	2892	31326	5559	0.010949371129413268	-	UGGUCUCACGAACUUCUUUUUUUCAAGA	1493	278	30230	168	89	191	370	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8314931-8315357	Cluster_4512	Pocillopora_meandrina_HIv1___Sc0000014	8314931	8315357	427	102	33	0.00980392156862745	-	UCUGCCUCAUUUAAGAACUCUAGCCCAAGG	16	2	97	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8514304-8514718	Cluster_4513	Pocillopora_meandrina_HIv1___Sc0000014	8514304	8514718	415	147	16	1.0	+	GUUAGGCGGAACCUG	44	147	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8548728-8549222	Cluster_4514	Pocillopora_meandrina_HIv1___Sc0000014	8548728	8549222	495	6077	1384	0.9876583840710877	+	AAAUUGGAACGAUACAGAGAAGA	132	1133	2968	457	421	640	458	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8675063-8675485	Cluster_4515	Pocillopora_meandrina_HIv1___Sc0000014	8675063	8675485	423	92	41	1.0	+	UGAUUGCAGAGCACAGCAUUGCCACCAGC	10	0	89	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:8695815-8696221	Cluster_4516	Pocillopora_meandrina_HIv1___Sc0000014	8695815	8696221	407	130	92	0.007692307692307693	-	CACUGGCGUAGAACCAAGUUGGGACU	8	37	56	6	7	12	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9018696-9019111	Cluster_4517	Pocillopora_meandrina_HIv1___Sc0000014	9018696	9019111	416	100	13	1.0	+	GAGACUUGAAGCGGGU	75	100	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9034686-9035113	Cluster_4518	Pocillopora_meandrina_HIv1___Sc0000014	9034686	9035113	428	4713	41	0.0	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAA	2423	737	3853	47	31	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9077979-9078682	Cluster_4519	Pocillopora_meandrina_HIv1___Sc0000014	9077979	9078682	704	567	243	0.054673721340388004	-	UAAUUUAUCCAUGUAUUCUUGAAGACGU	33	8	523	4	4	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9158628-9159057	Cluster_4520	Pocillopora_meandrina_HIv1___Sc0000014	9158628	9159057	430	892	169	0.9820627802690582	+	AUUUAUCCAAAGAACAACGACUCGAGGUC	202	23	706	4	28	9	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9192245-9192674	Cluster_4521	Pocillopora_meandrina_HIv1___Sc0000014	9192245	9192674	430	3284	156	0.9957369062119367	+	GUGUAGAUCAGCCGACUUCAACAUGUCUU	1411	11	3251	1	2	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9355807-9356269	Cluster_4522	Pocillopora_meandrina_HIv1___Sc0000014	9355807	9356269	463	239	164	0.9790794979079498	+	GUGAAUUUGGAUAAACUGUGGUCCCU	5	64	113	16	18	22	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9356489-9356904	Cluster_4523	Pocillopora_meandrina_HIv1___Sc0000014	9356489	9356904	416	215	118	0.986046511627907	+	CGCAGAGCUGAAGAAA	28	115	48	21	8	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9365459-9365552	Cluster_4524	Pocillopora_meandrina_HIv1___Sc0000014	9365459	9365552	94	10858	144	0.0	-	UUCCAGAUUUGUAUCAUUGUUAU	7330	88	18	141	246	9968	397	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000014:9408787-9409201	Cluster_4525	Pocillopora_meandrina_HIv1___Sc0000014	9408787	9409201	415	143	15	1.0	+	CCGUGUUGUAGGCUC	117	139	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000014:9519073-9519499	Cluster_4526	Pocillopora_meandrina_HIv1___Sc0000014	9519073	9519499	427	139	77	0.7266187050359713	.	UAUCAAUUAGAUUGUCUGUGAGUUUCCCUA	10	4	124	2	3	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:37645-38073	Cluster_4527	Pocillopora_meandrina_HIv1___Sc0000015	37645	38073	429	163	55	0.03680981595092025	-	UGAAAACUUAACAACGGACGGUAGGUCAUU	32	2	144	1	4	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:84063-84975	Cluster_4528	Pocillopora_meandrina_HIv1___Sc0000015	84063	84975	913	3660	544	0.4715846994535519	.	AUUUGUGAAAGAAAUGAUUUGGAGACCCC	443	33	3404	12	115	23	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:85347-85924	Cluster_4529	Pocillopora_meandrina_HIv1___Sc0000015	85347	85924	578	3559	411	0.5400393368923855	.	UAACAAUAUUGGUGUGUCAGAGGAUUUCU	395	65	3349	4	17	26	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:86507-86955	Cluster_4530	Pocillopora_meandrina_HIv1___Sc0000015	86507	86955	449	1341	123	0.4541387024608501	.	AAAACACUGAUCCUUCUUUUGGUAAAGAA	287	20	1286	12	12	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:87437-88212	Cluster_4531	Pocillopora_meandrina_HIv1___Sc0000015	87437	88212	776	7207	442	0.09310392673789371	-	UCACCAUGAAAAGACUCUGGGCCAAAG	1790	24	7050	8	14	69	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:122289-123222	Cluster_4532	Pocillopora_meandrina_HIv1___Sc0000015	122289	123222	934	647	155	0.5595054095826894	.	UGUACUUUCUUUGGGCCAUGUAAUCU	81	10	592	5	9	3	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:237145-237560	Cluster_4533	Pocillopora_meandrina_HIv1___Sc0000015	237145	237560	416	106	24	1.0	+	GUGAGGCCUCCUGACU	37	105	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:308150-308556	Cluster_4534	Pocillopora_meandrina_HIv1___Sc0000015	308150	308556	407	223	153	1.0	+	AACGGUGCCAAGAAGAA	6	98	70	9	10	18	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:309011-309465	Cluster_4535	Pocillopora_meandrina_HIv1___Sc0000015	309011	309465	455	1256	239	0.9968152866242038	+	UCGGCCCUUUCGAAGCUCAGAGC	365	148	353	91	49	530	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:376420-377588	Cluster_4536	Pocillopora_meandrina_HIv1___Sc0000015	376420	377588	1169	1081	233	0.7363552266419982	.	UAUUUUCUUCUGGUGGUUGAUGUCCUC	210	17	1033	4	8	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:377611-378021	Cluster_4537	Pocillopora_meandrina_HIv1___Sc0000015	377611	378021	411	136	66	0.5220588235294118	.	UUAACUCCACAACAGAACUCAAAUUCA	18	2	108	3	2	14	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:424997-425421	Cluster_4538	Pocillopora_meandrina_HIv1___Sc0000015	424997	425421	425	89	30	0.9887640449438202	+	CAAGACCGUGGGUGAGCUUCAAGACAUGA	31	5	82	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:473953-474380	Cluster_4539	Pocillopora_meandrina_HIv1___Sc0000015	473953	474380	428	619	127	0.8885298869143781	+	UGUGACAGCUCUUUUCCUCCUGCAAAGA	135	24	573	4	1	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:503926-504356	Cluster_4540	Pocillopora_meandrina_HIv1___Sc0000015	503926	504356	431	320	70	0.0	-	CGGAUGUCCAUUCAAGAACCUGAAAACUAU	54	6	306	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:566206-566621	Cluster_4541	Pocillopora_meandrina_HIv1___Sc0000015	566206	566621	416	157	11	0.9936305732484076	+	AGUGUGCCCUUAACUA	142	153	3	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:963175-963592	Cluster_4542	Pocillopora_meandrina_HIv1___Sc0000015	963175	963592	418	1746	28	0.010309278350515464	-	CUUUCUGGAGUUAAGGCG	1701	1738	4	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1021790-1022210	Cluster_4543	Pocillopora_meandrina_HIv1___Sc0000015	1021790	1022210	421	90	15	1.0	+	UCCGUGUGUUUGAUUGGAACAU	27	11	7	10	39	23	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1067869-1068297	Cluster_4544	Pocillopora_meandrina_HIv1___Sc0000015	1067869	1068297	429	152	46	0.9868421052631579	+	GAAGAGACCAAUCCCAAGUGGCGUAGAUA	93	10	129	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1164772-1165200	Cluster_4545	Pocillopora_meandrina_HIv1___Sc0000015	1164772	1165200	429	226	31	0.9911504424778761	+	UAGCAAAACAAACAGGUCUUUCGAUGGGA	142	5	219	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1253254-1253683	Cluster_4546	Pocillopora_meandrina_HIv1___Sc0000015	1253254	1253683	430	682	121	1.0	+	UCGGUACUCUGUUCAAUAAUAUUUCUC	235	4	671	0	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1520535-1520962	Cluster_4547	Pocillopora_meandrina_HIv1___Sc0000015	1520535	1520962	428	172	29	0.09883720930232558	-	UUGCAAAGAUAAAUCCGUGGUGAACUUC	69	3	164	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1564041-1564464	Cluster_4548	Pocillopora_meandrina_HIv1___Sc0000015	1564041	1564464	424	136	35	0.9264705882352942	+	UCGGAUUUUAAGGAGACAGCCCGUCAGU	34	3	66	4	2	21	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1699629-1700330	Cluster_4549	Pocillopora_meandrina_HIv1___Sc0000015	1699629	1700330	702	306	165	0.8921568627450981	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	25	5	285	2	5	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1701560-1701989	Cluster_4550	Pocillopora_meandrina_HIv1___Sc0000015	1701560	1701989	430	213	120	0.8403755868544601	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	30	1	194	0	1	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1754938-1755365	Cluster_4551	Pocillopora_meandrina_HIv1___Sc0000015	1754938	1755365	428	177	66	0.9943502824858758	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	3	169	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1761143-1761570	Cluster_4552	Pocillopora_meandrina_HIv1___Sc0000015	1761143	1761570	428	161	62	0.055900621118012424	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	46	1	154	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1784171-1784596	Cluster_4553	Pocillopora_meandrina_HIv1___Sc0000015	1784171	1784596	426	234	130	0.0641025641025641	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	19	3	219	0	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1884414-1884922	Cluster_4554	Pocillopora_meandrina_HIv1___Sc0000015	1884414	1884922	509	374	142	1.0	+	UGUGUCUUGUAUGCUCUUAAGGAGUCGUC	29	5	365	0	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1908015-1908445	Cluster_4555	Pocillopora_meandrina_HIv1___Sc0000015	1908015	1908445	431	428	174	0.8621495327102804	+	UGUAAGACGCACUCUACUCUGUUGU	63	32	361	8	6	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1913033-1913474	Cluster_4556	Pocillopora_meandrina_HIv1___Sc0000015	1913033	1913474	442	257	75	0.3151750972762646	.	AAAGUUAUGAAUAAAAGGAUCUCUGAAGUG	28	0	252	2	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1920978-1922480	Cluster_4557	Pocillopora_meandrina_HIv1___Sc0000015	1920978	1922480	1503	3622	1061	0.9668691330756488	+	UGAUUUCCUCUCUGACAUCUAAAGGUAG	254	36	3433	10	35	49	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1930537-1930964	Cluster_4558	Pocillopora_meandrina_HIv1___Sc0000015	1930537	1930964	428	101	13	1.0	+	UACCAAGGUCUUGUAGUCUAGUACAACU	63	0	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1948482-1949012	Cluster_4559	Pocillopora_meandrina_HIv1___Sc0000015	1948482	1949012	531	6420	425	0.02367601246105919	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	1599	12	6199	2	40	15	152	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:1984623-1985038	Cluster_4560	Pocillopora_meandrina_HIv1___Sc0000015	1984623	1985038	416	177	6	0.0	-	CGUUGCCUAGAUUUGU	107	177	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2137008-2137431	Cluster_4561	Pocillopora_meandrina_HIv1___Sc0000015	2137008	2137431	424	104	37	0.07692307692307693	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	29	2	98	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2179033-2179463	Cluster_4562	Pocillopora_meandrina_HIv1___Sc0000015	2179033	2179463	431	512	66	1.0	+	UGACAAUCAUGCUGCUAAGUUCCUACGC	134	0	506	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2217630-2218098	Cluster_4563	Pocillopora_meandrina_HIv1___Sc0000015	2217630	2218098	469	388	258	0.002577319587628866	-	CAGUGACUAUCUUGAAUCAGCA	8	131	155	25	30	18	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2219352-2219768	Cluster_4564	Pocillopora_meandrina_HIv1___Sc0000015	2219352	2219768	417	188	141	0.010638297872340425	-	CGAACUAUAGAUCAGCUGAAGAAAACUGUU	6	52	94	10	15	14	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2313548-2313964	Cluster_4565	Pocillopora_meandrina_HIv1___Sc0000015	2313548	2313964	417	131	24	0.9389312977099237	+	GCGAUUACAGGCGACGAA	23	129	1	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2354737-2355151	Cluster_4566	Pocillopora_meandrina_HIv1___Sc0000015	2354737	2355151	415	127	39	0.7480314960629921	.	CUUGCGGCGGGGCCU	61	107	7	2	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2366479-2366907	Cluster_4567	Pocillopora_meandrina_HIv1___Sc0000015	2366479	2366907	429	482	280	0.008298755186721992	-	GAAGGAAUAAAAACGAUCGACA	29	172	150	46	55	31	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2498054-2498639	Cluster_4568	Pocillopora_meandrina_HIv1___Sc0000015	2498054	2498639	586	616	422	0.0	-	GAUGAUAGAGACUGGGACUACC	8	231	200	53	48	44	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2499478-2499890	Cluster_4569	Pocillopora_meandrina_HIv1___Sc0000015	2499478	2499890	413	173	113	0.0	-	GACGGACCAAAAGGACC	11	87	31	4	8	21	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2588192-2588865	Cluster_4570	Pocillopora_meandrina_HIv1___Sc0000015	2588192	2588865	674	393	178	0.06615776081424936	-	UAUUAUACUGCGGGUUACUCAGCCAAGC	26	2	360	2	1	9	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2589511-2591482	Cluster_4571	Pocillopora_meandrina_HIv1___Sc0000015	2589511	2591482	1972	6773	1722	0.057138638712535064	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	458	47	6477	13	27	83	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2691120-2691596	Cluster_4572	Pocillopora_meandrina_HIv1___Sc0000015	2691120	2691596	477	2131	291	0.999061473486626	+	GGCCUGUUGGUCUAGUGGCAUGAUUCU	801	307	1731	21	20	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2693842-2694272	Cluster_4573	Pocillopora_meandrina_HIv1___Sc0000015	2693842	2694272	431	1151	214	0.0008688097306689834	-	GGCCUGUUGGUCUAGUGGCAUGAUUCU	429	96	998	8	13	14	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2695144-2695613	Cluster_4574	Pocillopora_meandrina_HIv1___Sc0000015	2695144	2695613	470	2731	351	0.9992676675210546	+	GGCCUGUUGGUCUAGUGGUAUGAUUCU	1165	342	2286	21	36	29	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2747588-2748003	Cluster_4575	Pocillopora_meandrina_HIv1___Sc0000015	2747588	2748003	416	982	28	0.0	-	CUUUCCGAGGUCGCCA	327	982	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2831547-2831973	Cluster_4576	Pocillopora_meandrina_HIv1___Sc0000015	2831547	2831973	427	83	30	0.03614457831325301	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	0	81	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2908426-2908849	Cluster_4577	Pocillopora_meandrina_HIv1___Sc0000015	2908426	2908849	424	98	42	0.9897959183673469	+	UGUUUGAUCUUUAGGUCCUUCGGACAUAGUU	13	2	95	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2943925-2944456	Cluster_4578	Pocillopora_meandrina_HIv1___Sc0000015	2943925	2944456	532	10993	536	0.9996361320840534	+	CGGAUAAGUACACUUGGCACAUUC	4115	460	4725	137	121	200	5350	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:2945554-2946088	Cluster_4579	Pocillopora_meandrina_HIv1___Sc0000015	2945554	2946088	535	4508	578	0.9991126885536823	+	GUGCUACAUUAGAACCCAGUCUACUGA	428	439	2524	203	225	460	657	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3136577-3136995	Cluster_4580	Pocillopora_meandrina_HIv1___Sc0000015	3136577	3136995	419	127	64	1.0	+	UGACAAUUCUGAUGGUUUUCACAAUUCUGA	34	5	118	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3137198-3137725	Cluster_4581	Pocillopora_meandrina_HIv1___Sc0000015	3137198	3137725	528	324	145	0.9876543209876543	+	UACCUAAUUAGAUACAUCCUGUUCACAGA	15	5	308	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3138374-3138792	Cluster_4582	Pocillopora_meandrina_HIv1___Sc0000015	3138374	3138792	419	120	54	0.9916666666666667	+	UGAAGAUCUGUAGCAAGGCAAAACUUAGC	26	4	111	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3139218-3139827	Cluster_4583	Pocillopora_meandrina_HIv1___Sc0000015	3139218	3139827	610	1239	334	0.9983857949959645	+	UGUUGUCUUCGCAGGUUGCAGUUGUCC	147	20	1182	4	12	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3142394-3142954	Cluster_4584	Pocillopora_meandrina_HIv1___Sc0000015	3142394	3142954	561	1022	212	0.9696673189823874	+	UGAAACGUCAAGUGCUGCAGAAAUUCUGC	192	38	958	13	8	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3143027-3143693	Cluster_4585	Pocillopora_meandrina_HIv1___Sc0000015	3143027	3143693	667	11026	966	0.9622709958280428	+	UAGGAAGAUACAAGACUACAAAUUUUAGU	1496	205	10345	24	43	212	197	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3143740-3145496	Cluster_4586	Pocillopora_meandrina_HIv1___Sc0000015	3143740	3145496	1757	2100	744	0.9909523809523809	+	UGUAAACUUCUAUGGGUUUCUUUGACGU	79	28	2020	8	4	18	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3147305-3147741	Cluster_4587	Pocillopora_meandrina_HIv1___Sc0000015	3147305	3147741	437	479	162	0.9937369519832986	+	UUUCCGGUCUUUUUGCAGCUUUUCUGUGA	51	7	465	0	0	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3149186-3149832	Cluster_4588	Pocillopora_meandrina_HIv1___Sc0000015	3149186	3149832	647	576	252	0.7135416666666666	.	UUUGCAGGAAAUGUGAUUUAAAAGGAAAUGU	38	6	520	1	3	17	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3149890-3150317	Cluster_4589	Pocillopora_meandrina_HIv1___Sc0000015	3149890	3150317	428	372	59	0.0	-	ACUGAGAUUCUGGCUGGAUUGUUCCACU	147	1	366	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3150652-3152265	Cluster_4590	Pocillopora_meandrina_HIv1___Sc0000015	3150652	3152265	1614	4328	873	0.8410351201478743	+	UAACACAACUCGCUUCCGGUCACGACACU	374	47	4079	21	32	53	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3152357-3152773	Cluster_4591	Pocillopora_meandrina_HIv1___Sc0000015	3152357	3152773	417	128	62	0.953125	+	UUACAGAAAUUAAUGCGGGAAACAGUACG	18	5	122	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3152945-3153763	Cluster_4592	Pocillopora_meandrina_HIv1___Sc0000015	3152945	3153763	819	726	355	0.9889807162534435	+	UGUAAACUUCUACGGGUUUCUUUGACGU	57	12	675	11	2	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3155089-3155640	Cluster_4593	Pocillopora_meandrina_HIv1___Sc0000015	3155089	3155640	552	228	82	0.9254385964912281	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	40	2	196	2	4	16	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3156880-3158100	Cluster_4594	Pocillopora_meandrina_HIv1___Sc0000015	3156880	3158100	1221	2009	488	0.8028870084619214	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	519	19	1892	7	9	23	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3159946-3161226	Cluster_4595	Pocillopora_meandrina_HIv1___Sc0000015	3159946	3161226	1281	4124	1074	0.7623666343355965	.	UCAGCGAAGAAUUAAAGAAGAACGG	161	76	3624	16	23	62	323	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3162249-3164089	Cluster_4596	Pocillopora_meandrina_HIv1___Sc0000015	3162249	3164089	1841	5336	1380	0.9336581709145427	+	UGAGAACGACGUCACCAGGCUUUAAGG	178	85	4924	12	30	92	193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3164893-3165320	Cluster_4597	Pocillopora_meandrina_HIv1___Sc0000015	3164893	3165320	428	330	175	0.8575757575757575	+	UGCUCUCGGAUACGCACUUGAAGAAAUGCUU	13	7	292	3	4	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3165435-3167679	Cluster_4598	Pocillopora_meandrina_HIv1___Sc0000015	3165435	3167679	2245	5058	1664	0.8964017398181099	+	UGUAUCCUGAAGCAUAAGACGCAGUCG	160	123	4545	25	57	75	233	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3167847-3168312	Cluster_4599	Pocillopora_meandrina_HIv1___Sc0000015	3167847	3168312	466	428	175	0.9929906542056075	+	UGUGCUGUUGUCGGAAGCUUGCUGGCAGU	48	7	410	0	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3170293-3170722	Cluster_4600	Pocillopora_meandrina_HIv1___Sc0000015	3170293	3170722	430	175	72	0.9942857142857143	+	UGAGAUUACGAAUUUUACGAGCGAGAACGU	40	2	166	2	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3171419-3171845	Cluster_4601	Pocillopora_meandrina_HIv1___Sc0000015	3171419	3171845	427	167	70	0.9940119760479041	+	UGCAACGAUUUUCAGUGGACACAAAUGGGA	53	1	162	0	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3175207-3176560	Cluster_4602	Pocillopora_meandrina_HIv1___Sc0000015	3175207	3176560	1354	8444	1661	0.9359308384651823	+	UGAGACUUGUUGUUGGGUAACUGACGUG	936	68	8080	21	33	108	134	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3497367-3497787	Cluster_4603	Pocillopora_meandrina_HIv1___Sc0000015	3497367	3497787	421	91	20	0.0	-	UACUGCUAUUCUUCUUCAGGC	37	6	1	40	18	20	6	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3719411-3719837	Cluster_4604	Pocillopora_meandrina_HIv1___Sc0000015	3719411	3719837	427	157	44	0.27388535031847133	.	UGAUUGGUGCAUUUCGAUCCUUGCUGU	69	3	150	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3752670-3753087	Cluster_4605	Pocillopora_meandrina_HIv1___Sc0000015	3752670	3753087	418	133	43	0.10526315789473684	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	26	8	58	24	17	18	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3776683-3777111	Cluster_4606	Pocillopora_meandrina_HIv1___Sc0000015	3776683	3777111	429	150	40	0.006666666666666667	-	UGAAACGUGUUGCUGAACGCUUGUUGUA	24	1	148	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3777214-3777641	Cluster_4607	Pocillopora_meandrina_HIv1___Sc0000015	3777214	3777641	428	101	20	0.0297029702970297	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	35	1	99	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3822576-3823004	Cluster_4608	Pocillopora_meandrina_HIv1___Sc0000015	3822576	3823004	429	101	16	0.9900990099009901	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	51	0	100	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3855316-3855749	Cluster_4609	Pocillopora_meandrina_HIv1___Sc0000015	3855316	3855749	434	216	142	0.4444444444444444	.	CCGGCAAAUACAAGAAUAAAUACAUCGU	7	11	184	3	1	11	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:3932069-3932483	Cluster_4610	Pocillopora_meandrina_HIv1___Sc0000015	3932069	3932483	415	88	15	0.011363636363636364	-	AGUGUGCUCCUAACGG	20	88	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4067580-4068007	Cluster_4611	Pocillopora_meandrina_HIv1___Sc0000015	4067580	4068007	428	266	110	0.9060150375939849	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	3	248	2	0	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4161872-4162300	Cluster_4612	Pocillopora_meandrina_HIv1___Sc0000015	4161872	4162300	429	911	17	0.0	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	789	0	911	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4266460-4266875	Cluster_4613	Pocillopora_meandrina_HIv1___Sc0000015	4266460	4266875	416	171	13	1.0	+	CUGUUCGAGCGUCAUU	93	168	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4272438-4272852	Cluster_4614	Pocillopora_meandrina_HIv1___Sc0000015	4272438	4272852	415	97	21	0.14432989690721648	-	CUUUCCGUGGUCGCG	57	86	5	0	3	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4602749-4603152	Cluster_4615	Pocillopora_meandrina_HIv1___Sc0000015	4602749	4603152	404	222	176	0.0	-	UGCUGGAACCUGUACGCAAGGAGACA	5	93	66	9	22	18	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4606846-4607255	Cluster_4616	Pocillopora_meandrina_HIv1___Sc0000015	4606846	4607255	410	131	98	0.022900763358778626	-	AGGAAAGACGAUGUUGCUGCC	5	51	29	13	8	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4719321-4719736	Cluster_4617	Pocillopora_meandrina_HIv1___Sc0000015	4719321	4719736	416	247	76	0.9635627530364372	+	UGUAUCCCAACCAAGU	152	159	80	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4858468-4858886	Cluster_4618	Pocillopora_meandrina_HIv1___Sc0000015	4858468	4858886	419	136	26	1.0	+	AGAGAGCUUUCUGAACCAGAA	39	37	0	42	56	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:4859061-4859670	Cluster_4619	Pocillopora_meandrina_HIv1___Sc0000015	4859061	4859670	610	605	62	0.9983471074380166	+	UGUGGUUCGGAAUGCUUUCUCC	352	30	2	59	485	20	9	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5252570-5253000	Cluster_4620	Pocillopora_meandrina_HIv1___Sc0000015	5252570	5253000	431	338	128	0.11834319526627218	-	UGUGUCAGAUGCGUUUCAGAAAUGGUU	95	3	317	2	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5253150-5253805	Cluster_4621	Pocillopora_meandrina_HIv1___Sc0000015	5253150	5253805	656	636	311	0.38836477987421386	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	26	7	559	2	14	14	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5254025-5254682	Cluster_4622	Pocillopora_meandrina_HIv1___Sc0000015	5254025	5254682	658	1093	327	0.08142726440988106	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	100	2	1041	3	1	25	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5254920-5255346	Cluster_4623	Pocillopora_meandrina_HIv1___Sc0000015	5254920	5255346	427	269	152	0.13382899628252787	-	UGAGUCGAGGUUAUUCACAAUACGAGC	32	9	229	2	1	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5319061-5319480	Cluster_4624	Pocillopora_meandrina_HIv1___Sc0000015	5319061	5319480	420	23852	107	4.192520543350663e-05	-	CUUUCUGGAGUUAAGGCA	10464	23852	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5640164-5640591	Cluster_4625	Pocillopora_meandrina_HIv1___Sc0000015	5640164	5640591	428	130	49	1.0	+	AAACGAUUGAAUAGCAUAACUGAUG	13	2	127	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:5920350-5920918	Cluster_4626	Pocillopora_meandrina_HIv1___Sc0000015	5920350	5920918	569	1764	382	0.10034013605442177	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	280	17	1678	4	4	42	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6137366-6138033	Cluster_4627	Pocillopora_meandrina_HIv1___Sc0000015	6137366	6138033	668	631	119	0.2091917591125198	.	UCGACGUCGAUAUCAACAUUCUUAAUGU	195	2	514	0	21	1	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6142344-6142771	Cluster_4628	Pocillopora_meandrina_HIv1___Sc0000015	6142344	6142771	428	277	128	0.5848375451263538	.	UGCGAUUACAGAGGUGCGUUGGAACUCU	34	25	224	5	8	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6290041-6290469	Cluster_4629	Pocillopora_meandrina_HIv1___Sc0000015	6290041	6290469	429	523	76	0.9866156787762906	+	UUGUGUAUUAAGUGAGUUGUGAUUUCGUU	142	6	360	6	7	37	107	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6307677-6308079	Cluster_4630	Pocillopora_meandrina_HIv1___Sc0000015	6307677	6308079	403	88	43	1.0	+	AACUGUGAGAUUGUGUGAGAGGUGAGC	16	10	68	4	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6409860-6410277	Cluster_4631	Pocillopora_meandrina_HIv1___Sc0000015	6409860	6410277	418	113	41	0.035398230088495575	-	CUUGCAGUGCUCCGCGACC	13	93	0	5	1	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6426310-6426739	Cluster_4632	Pocillopora_meandrina_HIv1___Sc0000015	6426310	6426739	430	1179	101	0.0008481764206955047	-	UUACGUAUGCUCUUCACACUCAAGCCUAA	342	21	1118	7	15	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6434563-6434974	Cluster_4633	Pocillopora_meandrina_HIv1___Sc0000015	6434563	6434974	412	88	26	0.07954545454545454	-	UCCGCUACUUUGACCUCGU	25	82	2	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6538539-6538960	Cluster_4634	Pocillopora_meandrina_HIv1___Sc0000015	6538539	6538960	422	279	114	0.11827956989247312	-	UGCGUCUGUUCAGUGAUGGAU	60	123	20	105	23	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6803488-6803949	Cluster_4635	Pocillopora_meandrina_HIv1___Sc0000015	6803488	6803949	462	34258	821	0.00011676104851421566	-	GCACUGAUGGUUCAGUGGUAGAAUUCUC	14449	1000	31951	290	401	244	372	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6806070-6806578	Cluster_4636	Pocillopora_meandrina_HIv1___Sc0000015	6806070	6806578	509	492	137	0.9288617886178862	+	GCACUUGUGGUUCAGUGGUUGAACGCU	52	237	163	41	36	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6810457-6810877	Cluster_4637	Pocillopora_meandrina_HIv1___Sc0000015	6810457	6810877	421	80	29	0.0	-	GGGGGCAUAGCUCAGUGGUAGAGCAUU	16	4	49	6	11	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6812948-6813520	Cluster_4638	Pocillopora_meandrina_HIv1___Sc0000015	6812948	6813520	573	724	471	0.008287292817679558	-	CGUUGGGGCGGUGUC	25	295	240	55	42	56	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6817521-6818119	Cluster_4639	Pocillopora_meandrina_HIv1___Sc0000015	6817521	6818119	599	791	483	0.007585335018963337	-	GACCGAAUGGAAACUCUUUACGUUGACGU	14	284	289	66	49	57	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6819204-6819622	Cluster_4640	Pocillopora_meandrina_HIv1___Sc0000015	6819204	6819622	419	90	62	0.0	-	CAGUAGAUCGAGAUCCAAGCUCUGACC	4	24	34	19	5	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6821249-6821667	Cluster_4641	Pocillopora_meandrina_HIv1___Sc0000015	6821249	6821667	419	398	279	0.0	-	AGGACGAUGCGCUGUC	6	139	141	24	41	25	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:6933551-6933966	Cluster_4642	Pocillopora_meandrina_HIv1___Sc0000015	6933551	6933966	416	244	10	0.9672131147540983	+	GCUGGAUGAUGAGACA	234	238	4	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7024427-7024838	Cluster_4643	Pocillopora_meandrina_HIv1___Sc0000015	7024427	7024838	412	193	139	0.0051813471502590676	-	GUAAACUGUAAAAUGGUAG	5	63	85	8	12	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7029745-7030429	Cluster_4644	Pocillopora_meandrina_HIv1___Sc0000015	7029745	7030429	685	15952	3328	0.9851429287863591	+	CCCUCGUGGCUGAUCUGGUGAU	671	5197	5003	1340	2224	1135	1053	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7075190-7075786	Cluster_4645	Pocillopora_meandrina_HIv1___Sc0000015	7075190	7075786	597	5611	518	0.0019604348600962395	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	871	17	5554	3	3	7	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7220786-7221213	Cluster_4646	Pocillopora_meandrina_HIv1___Sc0000015	7220786	7221213	428	272	139	0.6360294117647058	.	UGGCCGAUCUGGACACUCGUU	14	114	38	67	25	24	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7385939-7386363	Cluster_4647	Pocillopora_meandrina_HIv1___Sc0000015	7385939	7386363	425	258	131	0.35271317829457366	.	UGCGAAAUGAACUCAGAGCUUUCUG	44	6	227	2	3	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7387855-7388282	Cluster_4648	Pocillopora_meandrina_HIv1___Sc0000015	7387855	7388282	428	97	5	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	65	0	97	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7563932-7564528	Cluster_4649	Pocillopora_meandrina_HIv1___Sc0000015	7563932	7564528	597	5713	520	0.9970243304743567	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	871	29	5641	5	3	7	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7642041-7642588	Cluster_4650	Pocillopora_meandrina_HIv1___Sc0000015	7642041	7642588	548	603	220	0.04311774461028192	-	UAUCUGGAAAACUAUAUGAUCUUAACUUUA	65	9	571	1	4	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7782375-7782875	Cluster_4651	Pocillopora_meandrina_HIv1___Sc0000015	7782375	7782875	501	624	194	0.8237179487179487	+	UGUAAACCUCUGAUUACC	67	108	458	1	1	17	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:7789352-7789778	Cluster_4652	Pocillopora_meandrina_HIv1___Sc0000015	7789352	7789778	427	191	102	0.8848167539267016	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	18	0	173	1	3	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8022317-8022743	Cluster_4653	Pocillopora_meandrina_HIv1___Sc0000015	8022317	8022743	427	192	99	0.828125	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	28	1	178	0	0	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8038314-8038740	Cluster_4654	Pocillopora_meandrina_HIv1___Sc0000015	8038314	8038740	427	194	96	0.8711340206185567	+	UGAUCCGCUCCCAUUCGAACUUUAGGC	23	1	181	3	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8138598-8139026	Cluster_4655	Pocillopora_meandrina_HIv1___Sc0000015	8138598	8139026	429	178	74	1.0	+	GAAGAGUUGAGUAGGAUGUUGAACGAAGA	30	9	160	5	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8146443-8146854	Cluster_4656	Pocillopora_meandrina_HIv1___Sc0000015	8146443	8146854	412	254	192	0.9960629921259843	+	GGGUUGAUGCAAACGUGAACUGGUGCU	6	81	117	14	16	11	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8253460-8253904	Cluster_4657	Pocillopora_meandrina_HIv1___Sc0000015	8253460	8253904	445	398	135	0.9748743718592965	+	UAAUCUUUGAUUGACGUACGGUAUUUGAGA	29	13	371	3	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8262262-8262689	Cluster_4658	Pocillopora_meandrina_HIv1___Sc0000015	8262262	8262689	428	195	73	0.9794871794871794	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	24	5	181	0	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8263467-8263913	Cluster_4659	Pocillopora_meandrina_HIv1___Sc0000015	8263467	8263913	447	338	146	0.7899408284023669	.	UCUUGUCUUAAAUUCUGAAUUCUCACUUC	58	10	313	0	3	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8294636-8295050	Cluster_4660	Pocillopora_meandrina_HIv1___Sc0000015	8294636	8295050	415	178	13	0.9943820224719101	+	AGUGUGCUCUUGACU	130	177	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8339361-8339960	Cluster_4661	Pocillopora_meandrina_HIv1___Sc0000015	8339361	8339960	600	5943	1149	0.9993269392562679	+	UGCCCAGUGACGAUAAAGAUGA	295	2189	1417	433	698	477	729	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8387393-8387801	Cluster_4662	Pocillopora_meandrina_HIv1___Sc0000015	8387393	8387801	409	205	151	0.00975609756097561	-	UUAGAUCGAUGACGUGCCC	6	69	80	19	16	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8497462-8497984	Cluster_4663	Pocillopora_meandrina_HIv1___Sc0000015	8497462	8497984	523	1327	413	0.0	-	GGCCAAAGUGAUAACGCUUAUACUCUGAUG	117	258	764	90	74	72	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8498175-8498704	Cluster_4664	Pocillopora_meandrina_HIv1___Sc0000015	8498175	8498704	530	962	357	0.0010395010395010396	-	GAUAAAAAAUAAAGUCUGACACUG	149	365	227	70	78	49	173	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8500922-8501444	Cluster_4665	Pocillopora_meandrina_HIv1___Sc0000015	8500922	8501444	523	964	323	0.0031120331950207467	-	GAUAAAAUUGCAAGUCUGAUACUGA	91	187	474	75	41	65	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8543212-8543629	Cluster_4666	Pocillopora_meandrina_HIv1___Sc0000015	8543212	8543629	418	106	19	0.9811320754716981	+	UGGCCUAAAAAAAAAAAA	13	81	0	14	11	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8630535-8630951	Cluster_4667	Pocillopora_meandrina_HIv1___Sc0000015	8630535	8630951	417	116	29	0.7586206896551724	.	CUUAACUGAGUGUCUAU	85	98	8	1	1	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8687559-8687991	Cluster_4668	Pocillopora_meandrina_HIv1___Sc0000015	8687559	8687991	433	484833	846	2.0625658731975752e-06	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	188136	19	484016	5	24	60	709	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8753275-8753749	Cluster_4669	Pocillopora_meandrina_HIv1___Sc0000015	8753275	8753749	475	5055	414	0.0	-	UCCCAUAUGGUCUAGCGGUUAGGAUUCCU	1393	206	3811	442	421	128	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8753833-8754251	Cluster_4670	Pocillopora_meandrina_HIv1___Sc0000015	8753833	8754251	419	158	69	0.0189873417721519	-	CCGGUGUGGGAACCG	35	88	57	8	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8756244-8756664	Cluster_4671	Pocillopora_meandrina_HIv1___Sc0000015	8756244	8756664	421	323	19	1.0	+	UCGACUCCCGGUAUGGGAACA	286	1	2	300	14	6	0	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8783889-8784306	Cluster_4672	Pocillopora_meandrina_HIv1___Sc0000015	8783889	8784306	418	221	12	0.004524886877828055	-	CGGCCUGAAAAAAAAAA	96	218	0	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8809819-8810235	Cluster_4673	Pocillopora_meandrina_HIv1___Sc0000015	8809819	8810235	417	328	17	0.9969512195121951	+	UAGAAUGUUUACUCGUG	188	328	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8850227-8850641	Cluster_4674	Pocillopora_meandrina_HIv1___Sc0000015	8850227	8850641	415	202	16	0.0594059405940594	-	UCUGGAGUCUCGGCA	184	198	2	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8855523-8855937	Cluster_4675	Pocillopora_meandrina_HIv1___Sc0000015	8855523	8855937	415	118	92	0.0	-	GGAUUCUACUGUAGCUCCGUAAGUGCU	3	37	48	6	14	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:8957311-8957726	Cluster_4676	Pocillopora_meandrina_HIv1___Sc0000015	8957311	8957726	416	400	7	0.0	-	UGUAUCCCAACCAAGC	346	399	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9017659-9018085	Cluster_4677	Pocillopora_meandrina_HIv1___Sc0000015	9017659	9018085	427	436	69	1.0	+	GGGGGCAUAGCUCAGUGGUAGAGCAUU	206	20	351	13	14	9	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9071577-9072007	Cluster_4678	Pocillopora_meandrina_HIv1___Sc0000015	9071577	9072007	431	76549	306	0.9999346823603182	+	GCACUGGUGGUUCAGUGGUAGAAUUCU	47755	37	75814	6	15	37	640	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9072831-9073262	Cluster_4679	Pocillopora_meandrina_HIv1___Sc0000015	9072831	9073262	432	556954	951	1.0	+	GCACUGGUGGUUCAGUGGUAGAAUUCUCGCC	155885	97	555686	23	53	83	1012	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9225606-9226032	Cluster_4680	Pocillopora_meandrina_HIv1___Sc0000015	9225606	9226032	427	406	307	0.0049261083743842365	-	AGAAAGUAGAAAAGGAAAUUCGUCGUUGGCU	8	147	163	21	36	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000015:9227729-9228147	Cluster_4681	Pocillopora_meandrina_HIv1___Sc0000015	9227729	9228147	419	161	116	0.012422360248447204	-	GAAGGGUCUUGUGCUGAGCA	8	64	42	23	11	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:129098-129526	Cluster_4682	Pocillopora_meandrina_HIv1___Sc0000016	129098	129526	429	134	29	0.9925373134328358	+	UGAGACCUGUCUGCAUUGAGCUUUAGUGU	83	7	124	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:166043-166473	Cluster_4683	Pocillopora_meandrina_HIv1___Sc0000016	166043	166473	431	128	46	0.9921875	+	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	48	1	125	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:302160-302583	Cluster_4684	Pocillopora_meandrina_HIv1___Sc0000016	302160	302583	424	87	46	0.9770114942528736	+	UGUGUAGAUAUGUCUUUUGGACAGGA	18	0	86	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:303144-303887	Cluster_4685	Pocillopora_meandrina_HIv1___Sc0000016	303144	303887	744	1368	425	0.8866959064327485	+	UGACGAUUGGUGUGAGUAGCUCAGCAC	89	15	1237	9	5	18	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:331685-332113	Cluster_4686	Pocillopora_meandrina_HIv1___Sc0000016	331685	332113	429	301	59	0.9966777408637874	+	UGGAAUUCGAAGCAAGUAACAAUCGACA	94	1	297	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:336418-337461	Cluster_4687	Pocillopora_meandrina_HIv1___Sc0000016	336418	337461	1044	773	363	0.9831824062095731	+	UAGGUAAUGGCACAAACUGAGAGGCGU	31	5	756	3	1	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:337919-338534	Cluster_4688	Pocillopora_meandrina_HIv1___Sc0000016	337919	338534	616	547	309	0.9378427787934186	+	UGCAAGAAGUACUGGGUUCACUGAGACC	24	5	521	2	0	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:339033-340012	Cluster_4689	Pocillopora_meandrina_HIv1___Sc0000016	339033	340012	980	1749	626	0.9371069182389937	+	UGAUUCUGACGCUUUAUUCCCCUGGAGA	109	19	1626	4	11	29	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:357787-358206	Cluster_4690	Pocillopora_meandrina_HIv1___Sc0000016	357787	358206	420	183	132	0.18032786885245902	-	UGGUGGAGCGCUGCACCGGU	6	78	44	17	17	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:399937-400364	Cluster_4691	Pocillopora_meandrina_HIv1___Sc0000016	399937	400364	428	179	85	0.21787709497206703	.	UCACGGUAGUAGUGUUGUUCAAUAGACUG	26	4	154	1	3	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:408747-409166	Cluster_4692	Pocillopora_meandrina_HIv1___Sc0000016	408747	409166	420	374	216	0.5106951871657754	.	UGGAAUAAAGCAACUACGUG	27	254	8	84	23	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:411660-412087	Cluster_4693	Pocillopora_meandrina_HIv1___Sc0000016	411660	412087	428	160	71	0.9625	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	45	1	154	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:423086-423757	Cluster_4694	Pocillopora_meandrina_HIv1___Sc0000016	423086	423757	672	342	150	0.3742690058479532	.	UGUGAUUUCAACUGUGAGUGUCAGAA	15	10	233	2	5	36	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:429147-429576	Cluster_4695	Pocillopora_meandrina_HIv1___Sc0000016	429147	429576	430	159	59	0.012578616352201259	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	44	6	152	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:430259-430690	Cluster_4696	Pocillopora_meandrina_HIv1___Sc0000016	430259	430690	432	350	149	0.008571428571428572	-	UGACGGCCUUUCAUCUUUGACGCAAUGAUC	22	2	341	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:430801-431229	Cluster_4697	Pocillopora_meandrina_HIv1___Sc0000016	430801	431229	429	114	38	0.03508771929824561	-	CUCUAGCACACUCGCACAAGUUAAAGGCA	27	9	104	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:449295-449715	Cluster_4698	Pocillopora_meandrina_HIv1___Sc0000016	449295	449715	421	182	90	0.016483516483516484	-	UGUAUCUCCAGCGUCUGAACAAGUCAUGU	29	24	133	8	7	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:515713-516351	Cluster_4699	Pocillopora_meandrina_HIv1___Sc0000016	515713	516351	639	439	331	0.9726651480637813	+	GUUGAUCGAGCAUUGCCCCGCGUGACU	7	170	136	25	44	30	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:519563-520144	Cluster_4700	Pocillopora_meandrina_HIv1___Sc0000016	519563	520144	582	416	262	0.9927884615384616	+	AGAGGGGGUAAGAGCGCU	15	157	140	33	27	27	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:700335-700758	Cluster_4701	Pocillopora_meandrina_HIv1___Sc0000016	700335	700758	424	85	30	0.2235294117647059	.	UUGGCACGUGUUGUUCCACAAAGAUAGAGU	38	1	83	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:703480-703895	Cluster_4702	Pocillopora_meandrina_HIv1___Sc0000016	703480	703895	416	462	33	0.9935064935064936	+	AAGUGUGCUCUUAACC	190	447	2	1	8	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:705545-706139	Cluster_4703	Pocillopora_meandrina_HIv1___Sc0000016	705545	706139	595	198	39	0.030303030303030304	-	UACCAUAGAACUCACUUGAACAUUUCAUC	57	3	190	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:714375-714789	Cluster_4704	Pocillopora_meandrina_HIv1___Sc0000016	714375	714789	415	125	43	0.344	.	CAGUCGGUAGAGCACG	22	97	4	17	3	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:786273-786694	Cluster_4705	Pocillopora_meandrina_HIv1___Sc0000016	786273	786694	422	999	51	0.997997997997998	+	UCUGACGAGGGGCUGACACUCA	398	45	0	490	446	11	7	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:792206-792630	Cluster_4706	Pocillopora_meandrina_HIv1___Sc0000016	792206	792630	425	94	36	0.02127659574468085	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	0	93	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:911271-911685	Cluster_4707	Pocillopora_meandrina_HIv1___Sc0000016	911271	911685	415	938	14	1.0	+	CGGCCUGAAAAAAAA	903	938	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1497797-1498305	Cluster_4708	Pocillopora_meandrina_HIv1___Sc0000016	1497797	1498305	509	2254	233	0.04081632653061224	-	UGAGACAGUACACACGAUUUGAUAU	525	9	2191	1	4	22	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1506420-1506847	Cluster_4709	Pocillopora_meandrina_HIv1___Sc0000016	1506420	1506847	428	195	89	0.9333333333333333	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	73	5	181	0	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1508878-1509287	Cluster_4710	Pocillopora_meandrina_HIv1___Sc0000016	1508878	1509287	410	342	202	0.7339181286549707	.	CGCGGUUACAAAGAAGAUGACAGA	25	1	277	2	1	17	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1509441-1510523	Cluster_4711	Pocillopora_meandrina_HIv1___Sc0000016	1509441	1510523	1083	1247	531	0.8500400962309543	+	UGAUGACUUUGGACUGAAACCAUGAACA	135	17	1106	11	30	27	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1528767-1529419	Cluster_4712	Pocillopora_meandrina_HIv1___Sc0000016	1528767	1529419	653	642	236	0.06697819314641744	-	UAAUGACUUCAGAGUAGACAGAGACGGU	81	10	604	7	3	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1530112-1530550	Cluster_4713	Pocillopora_meandrina_HIv1___Sc0000016	1530112	1530550	439	301	127	0.39867109634551495	.	AUAUCCUACAUCUUGUUCAGACGCUGACU	37	5	268	3	2	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1542070-1542496	Cluster_4714	Pocillopora_meandrina_HIv1___Sc0000016	1542070	1542496	427	84	21	1.0	+	AGGAUGGACUGUGUUCCAGAGGAGACUG	22	0	75	0	9	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1564855-1565893	Cluster_4715	Pocillopora_meandrina_HIv1___Sc0000016	1564855	1565893	1039	1211	592	0.6440957886044592	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	55	33	1065	15	15	30	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1567184-1567608	Cluster_4716	Pocillopora_meandrina_HIv1___Sc0000016	1567184	1567608	425	253	153	0.15019762845849802	-	CUUGGAUUGAUGCAGAAGUUAACA	20	2	223	1	0	1	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1961743-1963021	Cluster_4717	Pocillopora_meandrina_HIv1___Sc0000016	1961743	1963021	1279	4167	1212	0.497960163186945	.	UGAACCAGGAACACUUCGAGCUUUGAUU	212	101	3767	38	43	50	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1963372-1964203	Cluster_4718	Pocillopora_meandrina_HIv1___Sc0000016	1963372	1964203	832	4271	896	0.7429173495668462	.	UGUGACUGAAAAGAUCUUGAAAGAACUUA	448	95	3787	29	35	67	258	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1964293-1964722	Cluster_4719	Pocillopora_meandrina_HIv1___Sc0000016	1964293	1964722	430	414	82	0.9492753623188406	+	AAACAGAAGACAAAGAUUGUUGAGACAGA	206	0	405	0	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1973704-1974132	Cluster_4720	Pocillopora_meandrina_HIv1___Sc0000016	1973704	1974132	429	137	44	0.0	-	UGAACGUCUGUGAGCGUCUGUACGCUUAUU	61	2	133	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1975076-1975490	Cluster_4721	Pocillopora_meandrina_HIv1___Sc0000016	1975076	1975490	415	145	66	0.006896551724137931	-	UGUUAACUCACCAUCUAAAACGAAUAGAUU	16	2	142	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1979755-1980183	Cluster_4722	Pocillopora_meandrina_HIv1___Sc0000016	1979755	1980183	429	136	28	0.0	-	UGUUUCAAAGGGAUUCAGUAAGAUUAAUA	71	13	121	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1980877-1982515	Cluster_4723	Pocillopora_meandrina_HIv1___Sc0000016	1980877	1982515	1639	3882	1118	0.030139103554868624	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	251	25	3691	12	38	55	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1983933-1984362	Cluster_4724	Pocillopora_meandrina_HIv1___Sc0000016	1983933	1984362	430	222	110	0.009009009009009009	-	UGCACCGGUCUUUUUCGAGUCACUGACUUUU	24	5	214	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1985561-1987066	Cluster_4725	Pocillopora_meandrina_HIv1___Sc0000016	1985561	1987066	1506	9024	1452	0.08754432624113476	-	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCG	600	90	8375	51	39	100	369	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1987515-1987941	Cluster_4726	Pocillopora_meandrina_HIv1___Sc0000016	1987515	1987941	427	247	114	0.06477732793522267	-	UUCUUCAUUGCUUUAGUCACAGACUUU	42	3	231	0	3	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1988558-1988986	Cluster_4727	Pocillopora_meandrina_HIv1___Sc0000016	1988558	1988986	429	1229	143	0.025223759153783564	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	764	5	1198	0	3	2	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1992023-1992434	Cluster_4728	Pocillopora_meandrina_HIv1___Sc0000016	1992023	1992434	412	105	40	0.01904761904761905	-	UGCCAUCUUGAAGAUCUGUGUGCACCAUC	51	3	94	1	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1992665-1994013	Cluster_4729	Pocillopora_meandrina_HIv1___Sc0000016	1992665	1994013	1349	11933	1539	0.01960948629849996	-	UGUAACAUUUUGCAUCGAUCGACGGUACA	1365	87	11516	111	26	49	144	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1994460-1994868	Cluster_4730	Pocillopora_meandrina_HIv1___Sc0000016	1994460	1994868	409	226	118	0.035398230088495575	-	UAGCACAUCAAGGCAGUCAAAGAACUAGUC	29	1	214	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1995076-1995817	Cluster_4731	Pocillopora_meandrina_HIv1___Sc0000016	1995076	1995817	742	1182	308	0.001692047377326565	-	ACGGCAACUUCUCAUCUGUAACCUGCAC	189	11	1126	7	2	3	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1997344-1997863	Cluster_4732	Pocillopora_meandrina_HIv1___Sc0000016	1997344	1997863	520	564	283	0.051418439716312055	-	UCGGUGACGAAGGUAAAUAACUAAUGACGU	60	34	508	4	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1998333-1999692	Cluster_4733	Pocillopora_meandrina_HIv1___Sc0000016	1998333	1999692	1360	18092	1547	0.04593190360380279	-	UCUGCCGGGAGCUUCUUGUAGAAGACGG	1144	128	16859	55	61	287	702	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:1999773-2000611	Cluster_4734	Pocillopora_meandrina_HIv1___Sc0000016	1999773	2000611	839	550	249	0.005454545454545455	-	UGAUUAUCCGUCUUGGUUAGAAGUUUGCC	34	17	512	3	5	3	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2000859-2002047	Cluster_4735	Pocillopora_meandrina_HIv1___Sc0000016	2000859	2002047	1189	1050	413	0.002857142857142857	-	UUUCCAACAUCUGCAGGCGAGACUGC	52	30	993	4	6	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2004356-2005245	Cluster_4736	Pocillopora_meandrina_HIv1___Sc0000016	2004356	2005245	890	1445	468	0.0006920415224913495	-	UGAGAACUGCUGAUUGGGCUACAAGAUCGC	147	20	1230	4	12	169	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2005478-2006329	Cluster_4737	Pocillopora_meandrina_HIv1___Sc0000016	2005478	2006329	852	3337	324	0.4920587353910698	.	GAUUGGAACAGUCAUCAGACGGGUGGACA	449	367	2848	8	17	42	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2007745-2008172	Cluster_4738	Pocillopora_meandrina_HIv1___Sc0000016	2007745	2008172	428	202	67	0.01485148514851485	-	UGCUGAACAUUGCUCUUCUAAGAAGAUGAC	46	2	183	1	0	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2009468-2010177	Cluster_4739	Pocillopora_meandrina_HIv1___Sc0000016	2009468	2010177	710	1494	382	0.24564926372155288	.	UUUCCGUUGCAUUAGAGGACUUCUUGUC	188	29	1293	19	12	17	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2010241-2010664	Cluster_4740	Pocillopora_meandrina_HIv1___Sc0000016	2010241	2010664	424	163	67	0.8343558282208589	+	UUUCUUCGAAAACGUGGCAAUCCG	33	7	88	1	8	5	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2011247-2011657	Cluster_4741	Pocillopora_meandrina_HIv1___Sc0000016	2011247	2011657	411	146	73	0.5273972602739726	.	UUAACUCCACAACAGAACUCAAAUUCA	14	2	115	3	4	19	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2011707-2012152	Cluster_4742	Pocillopora_meandrina_HIv1___Sc0000016	2011707	2012152	446	2015	168	0.17866004962779156	-	UGCGAUAAUAAAAUUCCAGGACUUUCCAGG	390	3	1793	4	9	65	141	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2012397-2013719	Cluster_4743	Pocillopora_meandrina_HIv1___Sc0000016	2012397	2013719	1323	1563	727	0.07613563659628919	-	UGUGAGAAAAGGAUUGAUCUGUUUUGC	37	18	1455	7	10	17	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2014002-2014753	Cluster_4744	Pocillopora_meandrina_HIv1___Sc0000016	2014002	2014753	752	843	256	0.03084223013048636	-	UGAACGAUCUUUCCGACAGGUUCUCAACU	80	1	822	2	2	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2015470-2015897	Cluster_4745	Pocillopora_meandrina_HIv1___Sc0000016	2015470	2015897	428	104	6	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	71	0	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2018256-2019743	Cluster_4746	Pocillopora_meandrina_HIv1___Sc0000016	2018256	2019743	1488	4017	1334	0.10405775454319144	-	UAGCGGUAUUUUCUUCAAUAGUAAGGU	150	65	3553	22	34	174	169	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2019759-2020804	Cluster_4747	Pocillopora_meandrina_HIv1___Sc0000016	2019759	2020804	1046	2531	792	0.06440142236270249	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	277	63	2337	13	28	46	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2020871-2021281	Cluster_4748	Pocillopora_meandrina_HIv1___Sc0000016	2020871	2021281	411	115	70	0.02608695652173913	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	13	0	102	1	8	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2021407-2022449	Cluster_4749	Pocillopora_meandrina_HIv1___Sc0000016	2021407	2022449	1043	1050	400	0.31142857142857144	.	CAACUUCGCAAAGACCUGACAAGA	63	28	829	60	3	30	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2028107-2028519	Cluster_4750	Pocillopora_meandrina_HIv1___Sc0000016	2028107	2028519	413	84	48	0.9880952380952381	+	AAAGGUAACUACUGUAGGCU	9	36	22	19	5	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2030384-2031291	Cluster_4751	Pocillopora_meandrina_HIv1___Sc0000016	2030384	2031291	908	1449	580	0.06901311249137336	-	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	49	8	1384	5	10	13	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2031617-2032028	Cluster_4752	Pocillopora_meandrina_HIv1___Sc0000016	2031617	2032028	412	168	91	0.005952380952380952	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	20	1	159	1	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2032248-2032679	Cluster_4753	Pocillopora_meandrina_HIv1___Sc0000016	2032248	2032679	432	304	125	0.07236842105263158	-	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	26	10	278	0	2	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2047356-2048281	Cluster_4754	Pocillopora_meandrina_HIv1___Sc0000016	2047356	2048281	926	6762	889	0.7522922212363207	.	UGUGAUUGCAUGGCUGGUCUUGGAGAGAGC	1112	149	5624	81	68	274	566	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2049709-2052600	Cluster_4755	Pocillopora_meandrina_HIv1___Sc0000016	2049709	2052600	2892	31447	5548	0.011511431933093777	-	UGGUCUCACGAACUUCUUUUUUUCAAGA	1431	263	30331	166	94	230	363	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2052862-2053462	Cluster_4756	Pocillopora_meandrina_HIv1___Sc0000016	2052862	2053462	601	2015	489	0.337468982630273	.	CGUACCUAAAUCUGUGAAUCCUGAACUUCC	135	125	1780	11	16	40	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2054561-2055417	Cluster_4757	Pocillopora_meandrina_HIv1___Sc0000016	2054561	2055417	857	648	204	0.625	.	UCACGAUUUUGAAUGGUAUGGGCA	101	37	444	3	6	31	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2057549-2059148	Cluster_4758	Pocillopora_meandrina_HIv1___Sc0000016	2057549	2059148	1600	1342	512	0.05588673621460507	-	UCCGAGAAGCUGAUUUCUGGACCAGUA	57	66	1250	5	6	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2059179-2059855	Cluster_4759	Pocillopora_meandrina_HIv1___Sc0000016	2059179	2059855	677	374	178	0.013368983957219251	-	UGAUCAAGGAGCUCUUUAGCUUUAACCCU	26	7	354	2	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2059892-2060338	Cluster_4760	Pocillopora_meandrina_HIv1___Sc0000016	2059892	2060338	447	460	205	0.034782608695652174	-	UGUGCCAUCCAAGGUCUUGAAGGAUUUGAU	32	21	433	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2060396-2060823	Cluster_4761	Pocillopora_meandrina_HIv1___Sc0000016	2060396	2060823	428	255	107	0.00784313725490196	-	UGCAUUUUUCCGAUAUAGAGCUGGACGU	46	3	247	2	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2061622-2062935	Cluster_4762	Pocillopora_meandrina_HIv1___Sc0000016	2061622	2062935	1314	7199	1541	0.009862480900125018	-	UGUGCAUUCAGGUUUGUCAUUGUCAAUAAC	525	62	6779	23	113	164	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2062993-2064048	Cluster_4763	Pocillopora_meandrina_HIv1___Sc0000016	2062993	2064048	1056	1950	706	0.011794871794871795	-	UGGGAACAUCUUUGAAGUCAUUUUUAUG	81	34	1829	12	20	32	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2064707-2065899	Cluster_4764	Pocillopora_meandrina_HIv1___Sc0000016	2064707	2065899	1193	3129	887	0.24704378395653565	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	501	32	2823	8	120	66	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2067316-2069300	Cluster_4765	Pocillopora_meandrina_HIv1___Sc0000016	2067316	2069300	1985	4766	1522	0.7773814519513219	.	UAAAACGACUUCCUCUUUCCUUUUGGAG	232	82	4042	36	30	138	438	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2069354-2070004	Cluster_4766	Pocillopora_meandrina_HIv1___Sc0000016	2069354	2070004	651	2512	488	0.03304140127388535	-	UGUUUCAAAGAAAGUCACUAAGACUGAGA	245	46	2412	3	19	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2070375-2070801	Cluster_4767	Pocillopora_meandrina_HIv1___Sc0000016	2070375	2070801	427	177	87	0.03954802259887006	-	UCACAUGUAGGUACCAGAUCUCUUCAAAG	17	5	165	0	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2071265-2073716	Cluster_4768	Pocillopora_meandrina_HIv1___Sc0000016	2071265	2073716	2452	12024	3079	0.03967065868263473	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	488	137	11005	68	94	176	544	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2074388-2074816	Cluster_4769	Pocillopora_meandrina_HIv1___Sc0000016	2074388	2074816	429	380	176	0.1763157894736842	-	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	95	6	339	5	9	11	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2075275-2075720	Cluster_4770	Pocillopora_meandrina_HIv1___Sc0000016	2075275	2075720	446	308	112	0.022727272727272728	-	UCCGACUUAUUAUAAUUCUUGAAAGACUGA	25	1	299	3	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2076668-2077241	Cluster_4771	Pocillopora_meandrina_HIv1___Sc0000016	2076668	2077241	574	2565	309	0.007017543859649123	-	UGUUUCUUUUUAAGUCUAUGUAAGUCCACU	712	24	2488	13	14	12	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2078691-2079490	Cluster_4772	Pocillopora_meandrina_HIv1___Sc0000016	2078691	2079490	800	410	238	0.1048780487804878	-	UGAUUUUGGAAUGUUGUUUACGUUGUG	19	5	373	4	1	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2081725-2082293	Cluster_4773	Pocillopora_meandrina_HIv1___Sc0000016	2081725	2082293	569	5889	537	0.010867719476991	-	UGUCAAAUUCUCAUCUUCCUAAGCUUU	1183	81	5700	45	13	13	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2083081-2083505	Cluster_4774	Pocillopora_meandrina_HIv1___Sc0000016	2083081	2083505	425	210	83	0.22380952380952382	.	UCAGCAAAAAUUGAUCAACAUUCCUACUUU	25	2	161	1	5	2	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2083699-2084123	Cluster_4775	Pocillopora_meandrina_HIv1___Sc0000016	2083699	2084123	425	154	64	0.09090909090909091	-	UCCAUAACUAUUUCUUGUUCCAGCU	22	4	141	0	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2086534-2086961	Cluster_4776	Pocillopora_meandrina_HIv1___Sc0000016	2086534	2086961	428	171	61	0.017543859649122806	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	52	0	166	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2087546-2088032	Cluster_4777	Pocillopora_meandrina_HIv1___Sc0000016	2087546	2088032	487	3453	360	0.0	-	UUCCUGCAGAUAUUUGAGCCAGAUAU	408	359	2780	19	15	37	243	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2088102-2089069	Cluster_4778	Pocillopora_meandrina_HIv1___Sc0000016	2088102	2089069	968	2524	426	0.001584786053882726	-	UAAACCUCUUGGCAAUAUAAGAUAACUCA	493	21	2472	5	7	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2089563-2090649	Cluster_4779	Pocillopora_meandrina_HIv1___Sc0000016	2089563	2090649	1087	814	355	0.0012285012285012285	-	UUUUGCUUCUCCAGCUGUAGUUCUUGG	45	36	764	5	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2090934-2091801	Cluster_4780	Pocillopora_meandrina_HIv1___Sc0000016	2090934	2091801	868	2383	259	0.006714225765841376	-	UAGGGUGCAACACCAUCUGUAUUGAAUGAG	614	12	2356	0	5	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2098714-2100470	Cluster_4781	Pocillopora_meandrina_HIv1___Sc0000016	2098714	2100470	1757	3445	862	0.0040638606676342524	-	UACAAGGCCAUCUAAAAUAGAAUCAAU	401	46	3321	6	7	43	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2100713-2101564	Cluster_4782	Pocillopora_meandrina_HIv1___Sc0000016	2100713	2101564	852	3599	611	0.0013892747985551543	-	UGACAUCAGCUCUGUGACUCUUUUGG	541	38	3301	4	17	85	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2101591-2102134	Cluster_4783	Pocillopora_meandrina_HIv1___Sc0000016	2101591	2102134	544	663	186	0.0	-	UCCUAGAUGUAUGAUGACUGAGCAUUUCAU	34	13	610	1	4	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2108815-2109222	Cluster_4784	Pocillopora_meandrina_HIv1___Sc0000016	2108815	2109222	408	86	40	0.0	-	UGUGAACUUCUUUCUGACCUGUGAAUGC	13	0	85	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2109276-2109705	Cluster_4785	Pocillopora_meandrina_HIv1___Sc0000016	2109276	2109705	430	102	31	0.0	-	UGAUUUAAAGUUACUGUAUGAGCUAGCUGU	45	2	98	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2155127-2155546	Cluster_4786	Pocillopora_meandrina_HIv1___Sc0000016	2155127	2155546	420	153	82	0.9084967320261438	+	UUUGAUCGGUUUUGGCGUGU	27	95	9	43	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2330302-2330729	Cluster_4787	Pocillopora_meandrina_HIv1___Sc0000016	2330302	2330729	428	86	22	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	24	0	85	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2345038-2345465	Cluster_4788	Pocillopora_meandrina_HIv1___Sc0000016	2345038	2345465	428	102	14	0.029411764705882353	-	AACUACUGCUCGUGCUCUAGAUAUGACA	70	1	99	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2383238-2383667	Cluster_4789	Pocillopora_meandrina_HIv1___Sc0000016	2383238	2383667	430	329	142	0.6565349544072948	.	UAGUGUUUGAAUUGUUGAAAGAAAUGGUC	66	52	256	12	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2403203-2403628	Cluster_4790	Pocillopora_meandrina_HIv1___Sc0000016	2403203	2403628	426	97	46	0.030927835051546393	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	1	94	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2457237-2457651	Cluster_4791	Pocillopora_meandrina_HIv1___Sc0000016	2457237	2457651	415	75	4	0.02666666666666667	-	CCGGACUGUUACAGCU	70	75	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2542146-2542562	Cluster_4792	Pocillopora_meandrina_HIv1___Sc0000016	2542146	2542562	417	378	17	0.005291005291005291	-	CGGCCUGAAAAAAAAAA	326	372	3	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2746694-2747109	Cluster_4793	Pocillopora_meandrina_HIv1___Sc0000016	2746694	2747109	416	186	39	0.9946236559139785	+	CAGCGUGGGUCGGAA	59	185	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2869347-2869910	Cluster_4794	Pocillopora_meandrina_HIv1___Sc0000016	2869347	2869910	564	558	358	0.974910394265233	+	UUUUGAACAGGAUCGAGGCU	9	168	261	37	29	23	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2977687-2978110	Cluster_4795	Pocillopora_meandrina_HIv1___Sc0000016	2977687	2978110	424	101	39	0.0	-	ACUGAGAUUCUGGCUGGAUUGUUCC	16	4	84	0	1	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:2998303-2998837	Cluster_4796	Pocillopora_meandrina_HIv1___Sc0000016	2998303	2998837	535	923	409	0.0010834236186348862	-	UAGGUCUGAUGCUGAAUAGGUUGUCACAAUU	83	318	449	27	48	43	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3036411-3036839	Cluster_4797	Pocillopora_meandrina_HIv1___Sc0000016	3036411	3036839	429	273	131	0.42857142857142855	.	AAGGAUACCACAUUCGGAAGUAUAAGAGA	51	12	238	4	4	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3090988-3091978	Cluster_4798	Pocillopora_meandrina_HIv1___Sc0000016	3090988	3091978	991	1579	588	0.8923369221025966	+	UUUGCUGAGAUACAUUUUCCUUCUGA	61	15	1395	4	16	62	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3094680-3095109	Cluster_4799	Pocillopora_meandrina_HIv1___Sc0000016	3094680	3095109	430	220	82	0.95	+	UAAUCCCAGGUCUUGUAUUGUAAUACUUCA	74	0	212	2	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3210812-3211240	Cluster_4800	Pocillopora_meandrina_HIv1___Sc0000016	3210812	3211240	429	1086	143	0.9714548802946593	+	UUCAGAUAUUUCAGCUGCGAGAUUGA	468	4	1070	1	5	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3211324-3212437	Cluster_4801	Pocillopora_meandrina_HIv1___Sc0000016	3211324	3212437	1114	3494	768	0.8763594733829422	+	UGUGGUAGACUUGUUUUUGACAUGGCA	168	110	2966	64	60	151	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3214743-3215578	Cluster_4802	Pocillopora_meandrina_HIv1___Sc0000016	3214743	3215578	836	369	159	0.01084010840108401	-	UGACAUUGUUCCUUCAACUGUUUUUUGAC	36	3	358	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3215721-3216149	Cluster_4803	Pocillopora_meandrina_HIv1___Sc0000016	3215721	3216149	429	168	30	0.011904761904761904	-	UGCUAUCUAGUCUUCUUAAUUGUCUGAUC	82	0	165	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3276360-3276777	Cluster_4804	Pocillopora_meandrina_HIv1___Sc0000016	3276360	3276777	418	109	5	0.0	-	AAGGUGAACAAAGCGAUA	84	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3425021-3425524	Cluster_4805	Pocillopora_meandrina_HIv1___Sc0000016	3425021	3425524	504	1917	189	0.006781429316640584	-	AGGAUGGACAGUGAUCCAGAAGAGGACGGA	668	114	1682	18	82	15	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3486771-3487188	Cluster_4806	Pocillopora_meandrina_HIv1___Sc0000016	3486771	3487188	418	105	23	0.9809523809523809	+	CGGCCUGAAAAAAAAAAAA	22	74	20	5	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3529474-3529903	Cluster_4807	Pocillopora_meandrina_HIv1___Sc0000016	3529474	3529903	430	385	121	0.8311688311688312	+	GGGAUGGACAGUGAUCCAGAAGAGAAUGGA	48	27	296	42	15	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3635522-3635950	Cluster_4808	Pocillopora_meandrina_HIv1___Sc0000016	3635522	3635950	429	119	51	0.9831932773109243	+	AUGGACAGUGAUCCAGAAGAGAAUGGAUG	27	10	104	2	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3640172-3640599	Cluster_4809	Pocillopora_meandrina_HIv1___Sc0000016	3640172	3640599	428	100	25	0.0	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	23	0	100	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3672349-3672777	Cluster_4810	Pocillopora_meandrina_HIv1___Sc0000016	3672349	3672777	429	215	88	0.7953488372093023	.	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	41	37	156	15	7	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3736896-3737393	Cluster_4811	Pocillopora_meandrina_HIv1___Sc0000016	3736896	3737393	498	444	173	0.013513513513513514	-	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	49	89	278	19	19	25	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3786097-3786594	Cluster_4812	Pocillopora_meandrina_HIv1___Sc0000016	3786097	3786594	498	308	111	0.8896103896103896	+	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	73	17	273	10	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3853179-3853635	Cluster_4813	Pocillopora_meandrina_HIv1___Sc0000016	3853179	3853635	457	397	175	0.7934508816120907	.	UGAAGAGUAUCACGAUUUCUGUCCACAAUGC	35	11	353	3	7	9	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3853803-3854408	Cluster_4814	Pocillopora_meandrina_HIv1___Sc0000016	3853803	3854408	606	1336	358	0.7387724550898204	.	UUUGACGGAAACAGUUAUGGACGGAUCC	61	26	991	36	41	121	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3877356-3877856	Cluster_4815	Pocillopora_meandrina_HIv1___Sc0000016	3877356	3877856	501	289	110	0.01384083044982699	-	GGGAUGGACAGUGAUCCAGGAGAAAAUGG	25	69	178	20	7	13	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3880780-3881525	Cluster_4816	Pocillopora_meandrina_HIv1___Sc0000016	3880780	3881525	746	2101	590	0.10376011423131842	-	UCAUCUGGUGUGAUUGUAUCGUGUGCAC	145	29	1971	6	33	25	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3881973-3882376	Cluster_4817	Pocillopora_meandrina_HIv1___Sc0000016	3881973	3882376	404	138	78	0.10869565217391304	-	UACUGGAAUAAUAACUUUACGAUCAACA	13	3	130	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3882866-3883290	Cluster_4818	Pocillopora_meandrina_HIv1___Sc0000016	3882866	3883290	425	136	87	0.1323529411764706	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	11	3	119	3	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3884381-3884802	Cluster_4819	Pocillopora_meandrina_HIv1___Sc0000016	3884381	3884802	422	129	64	0.046511627906976744	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	16	0	122	0	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3960711-3961139	Cluster_4820	Pocillopora_meandrina_HIv1___Sc0000016	3960711	3961139	429	204	88	0.7941176470588235	.	UGGCUUCGGUAACUUGGUCGGUGAAUUUU	43	17	154	23	6	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3965357-3965785	Cluster_4821	Pocillopora_meandrina_HIv1___Sc0000016	3965357	3965785	429	160	50	0.0125	-	GGGAUGGACAGUGAUCCAGGAGAAAAUGG	25	19	134	1	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:3984525-3985964	Cluster_4822	Pocillopora_meandrina_HIv1___Sc0000016	3984525	3985964	1440	2577	670	0.9491656965463717	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	216	7	2487	3	16	20	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4504286-4505176	Cluster_4823	Pocillopora_meandrina_HIv1___Sc0000016	4504286	4505176	891	1763	450	0.9449801474758933	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	201	8	1700	7	17	12	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4870761-4871167	Cluster_4824	Pocillopora_meandrina_HIv1___Sc0000016	4870761	4871167	407	109	55	0.27522935779816515	.	UUGGCUCCGAAUGAAAGAUCUUGAAUUACA	16	3	93	2	0	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:4964957-4965385	Cluster_4825	Pocillopora_meandrina_HIv1___Sc0000016	4964957	4965385	429	170	30	0.17647058823529413	-	AAAUGAAGCUCUCUUUGGUGAAAAUGUUG	60	1	166	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5158486-5158914	Cluster_4826	Pocillopora_meandrina_HIv1___Sc0000016	5158486	5158914	429	278	77	0.0	-	UGAAAGAUCUUCUCCACGAUUGCAGCGAA	70	2	268	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5159620-5160222	Cluster_4827	Pocillopora_meandrina_HIv1___Sc0000016	5159620	5160222	603	1267	192	0.0023677979479084454	-	UCCAAUCCCCACCGAGAAAGUAUUCAAUAUU	501	7	1246	0	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5257907-5258425	Cluster_4828	Pocillopora_meandrina_HIv1___Sc0000016	5257907	5258425	519	278	121	0.0035971223021582736	-	GGGGUUGAUGCUGAAUA	22	172	77	5	11	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5309996-5310407	Cluster_4829	Pocillopora_meandrina_HIv1___Sc0000016	5309996	5310407	412	122	72	0.9754098360655737	+	UGUACUUGAGUAAAGAUUGUUAGAAACU	8	1	108	0	8	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5310474-5313022	Cluster_4830	Pocillopora_meandrina_HIv1___Sc0000016	5310474	5313022	2549	6514	2074	0.9137242861529015	+	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	263	141	5855	41	57	199	221	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5321552-5321970	Cluster_4831	Pocillopora_meandrina_HIv1___Sc0000016	5321552	5321970	419	207	136	0.9855072463768116	+	CAGUUGAGCUCUGGGAAGCCCA	9	111	38	12	26	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5324507-5325076	Cluster_4832	Pocillopora_meandrina_HIv1___Sc0000016	5324507	5325076	570	457	332	0.9934354485776805	+	CGUGCUAGAGCUGUGUGAGGA	6	196	122	32	47	23	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5325764-5326185	Cluster_4833	Pocillopora_meandrina_HIv1___Sc0000016	5325764	5326185	422	374	268	0.9919786096256684	+	GCCUUGUAGUAAGCAGAUGACA	17	139	115	28	38	24	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5327726-5328223	Cluster_4834	Pocillopora_meandrina_HIv1___Sc0000016	5327726	5328223	498	531	386	0.9736346516007532	+	UCCGUCUGGGGCUGUUUCUGUGAAGAU	6	208	188	42	37	29	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5329153-5329568	Cluster_4835	Pocillopora_meandrina_HIv1___Sc0000016	5329153	5329568	416	230	170	1.0	+	CGUGUACUCGGACUUACAUUCUGCA	8	56	92	26	16	16	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5329740-5330156	Cluster_4836	Pocillopora_meandrina_HIv1___Sc0000016	5329740	5330156	417	271	204	0.996309963099631	+	CCACUGGAGAACUAAACGU	15	123	60	30	28	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5330505-5331187	Cluster_4837	Pocillopora_meandrina_HIv1___Sc0000016	5330505	5331187	683	613	432	0.9951060358890701	+	GCGCAGGCAAGCUGGACU	19	260	180	55	28	52	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5331757-5332175	Cluster_4838	Pocillopora_meandrina_HIv1___Sc0000016	5331757	5332175	419	465	352	0.9935483870967742	+	GAUUCAACAGAACUGCUGA	5	167	145	46	30	48	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5332327-5333037	Cluster_4839	Pocillopora_meandrina_HIv1___Sc0000016	5332327	5333037	711	941	663	0.9936238044633369	+	GAGACUGAAAAAGGACU	16	337	374	71	57	55	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5333537-5334266	Cluster_4840	Pocillopora_meandrina_HIv1___Sc0000016	5333537	5334266	730	972	697	0.9969135802469136	+	CUUCAAGAGGACGUGGAAU	12	305	396	81	73	55	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5334971-5335390	Cluster_4841	Pocillopora_meandrina_HIv1___Sc0000016	5334971	5335390	420	407	296	0.9975429975429976	+	CCCAUAGUUGGAAAUGUAACCGUC	10	153	126	17	27	46	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5335782-5336460	Cluster_4842	Pocillopora_meandrina_HIv1___Sc0000016	5335782	5336460	679	803	609	0.9975093399750934	+	AAACAGUUGCGUGCUUUAGAUGUU	6	253	305	68	67	49	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5337453-5337914	Cluster_4843	Pocillopora_meandrina_HIv1___Sc0000016	5337453	5337914	462	547	398	0.9616087751371115	+	UCGUGUUGUAGGCUU	16	194	226	46	24	23	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5338024-5339073	Cluster_4844	Pocillopora_meandrina_HIv1___Sc0000016	5338024	5339073	1050	1234	865	1.0	+	UAAGGCUGUAGUUAUGGCAGAUA	11	401	539	76	73	72	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5339267-5340206	Cluster_4845	Pocillopora_meandrina_HIv1___Sc0000016	5339267	5340206	940	1065	787	0.9971830985915493	+	CUCUAUCCAAACUGUUAAUGCUCCACGAU	34	338	460	70	62	64	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5340852-5341260	Cluster_4846	Pocillopora_meandrina_HIv1___Sc0000016	5340852	5341260	409	379	282	0.9947229551451188	+	GAUAAGCGCUUACAACCUGACUAA	5	136	116	38	27	25	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5341532-5342020	Cluster_4847	Pocillopora_meandrina_HIv1___Sc0000016	5341532	5342020	489	744	501	0.9946236559139785	+	CGACGAGGAUUGCUGAAAGCUAAGA	15	217	304	61	65	45	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5342024-5342789	Cluster_4848	Pocillopora_meandrina_HIv1___Sc0000016	5342024	5342789	766	948	690	0.9873417721518988	+	CUCGGACUAGGAACUACU	9	327	363	65	66	70	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5343093-5343674	Cluster_4849	Pocillopora_meandrina_HIv1___Sc0000016	5343093	5343674	582	549	413	0.9927140255009107	+	GGAGAUCGUCUGCGAUGUCGAGCA	10	213	190	43	24	35	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5343803-5344297	Cluster_4850	Pocillopora_meandrina_HIv1___Sc0000016	5343803	5344297	495	428	309	1.0	+	ACAGGGAAUGCGACUCGAGC	7	160	140	42	29	30	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5344478-5344937	Cluster_4851	Pocillopora_meandrina_HIv1___Sc0000016	5344478	5344937	460	645	457	0.9875968992248062	+	GGGGCUUUUGAGCAUCUGAAGUU	8	186	263	50	40	55	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:5345593-5346596	Cluster_4852	Pocillopora_meandrina_HIv1___Sc0000016	5345593	5346596	1004	1082	707	0.9990757855822551	+	UUCGAAGAGUAGGCUU	14	350	432	73	77	87	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6063552-6063966	Cluster_4853	Pocillopora_meandrina_HIv1___Sc0000016	6063552	6063966	415	231	9	0.0	-	GAGACUUGAAGCGGA	180	230	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6183757-6184302	Cluster_4854	Pocillopora_meandrina_HIv1___Sc0000016	6183757	6184302	546	227	95	0.20704845814977973	.	UGAUUUCUGAUGGAGACUCUAAGUCUU	27	12	192	1	4	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6353412-6353839	Cluster_4855	Pocillopora_meandrina_HIv1___Sc0000016	6353412	6353839	428	537	45	0.9925512104283054	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	298	3	531	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6523026-6523703	Cluster_4856	Pocillopora_meandrina_HIv1___Sc0000016	6523026	6523703	678	7924	563	0.0035335689045936395	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2160	15	7791	5	59	18	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6523841-6524266	Cluster_4857	Pocillopora_meandrina_HIv1___Sc0000016	6523841	6524266	426	387	240	0.18604651162790697	-	UCUUUCAGUCACUUAGAAGCCUCCAGG	9	5	313	3	5	21	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6558913-6563252	Cluster_4858	Pocillopora_meandrina_HIv1___Sc0000016	6558913	6563252	4340	11795	3654	0.0847816871555744	-	UGACUCUUCAAUCUCUGAAACGACUGCUC	500	165	10848	33	78	250	421	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6597189-6597603	Cluster_4859	Pocillopora_meandrina_HIv1___Sc0000016	6597189	6597603	415	154	2	0.0	-	AACUUUUGACGGUGU	153	153	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6721874-6722290	Cluster_4860	Pocillopora_meandrina_HIv1___Sc0000016	6721874	6722290	417	239	4	0.0	-	GAUGGAUGGAGACUGCA	236	237	0	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6777921-6778642	Cluster_4861	Pocillopora_meandrina_HIv1___Sc0000016	6777921	6778642	722	451	163	0.36807095343680707	.	CAAAGUCUCAAUUACCCACUGUCAUUG	57	21	377	3	5	13	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6879376-6880291	Cluster_4862	Pocillopora_meandrina_HIv1___Sc0000016	6879376	6880291	916	934	247	0.1284796573875803	-	UGUGACAGCUCUUUUCCUCCUGCAAAGA	127	44	782	6	9	70	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6885388-6885814	Cluster_4863	Pocillopora_meandrina_HIv1___Sc0000016	6885388	6885814	427	253	78	0.924901185770751	+	UUGGAACGUGUUGCUGAACGCUUGCU	41	6	239	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6906122-6906540	Cluster_4864	Pocillopora_meandrina_HIv1___Sc0000016	6906122	6906540	419	343	15	0.9970845481049563	+	CAUUAAUGCUGUAGGUGAA	267	342	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6943448-6943855	Cluster_4865	Pocillopora_meandrina_HIv1___Sc0000016	6943448	6943855	408	156	100	0.9935897435897436	+	GCCGCUAGAACCAGGAAGU	7	94	22	11	15	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:6944636-6945051	Cluster_4866	Pocillopora_meandrina_HIv1___Sc0000016	6944636	6945051	416	143	103	0.993006993006993	+	GAAAGACAACUGGAACC	5	58	46	15	10	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7074438-7074852	Cluster_4867	Pocillopora_meandrina_HIv1___Sc0000016	7074438	7074852	415	99	22	0.04040404040404041	-	GAGACUUGAAGCGGAU	23	92	3	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7162884-7163339	Cluster_4868	Pocillopora_meandrina_HIv1___Sc0000016	7162884	7163339	456	1705	221	0.09325513196480939	-	UAAGAAAUCUUCCACUGAUCGUUGAGUUGA	308	6	1623	9	7	12	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7271419-7271841	Cluster_4869	Pocillopora_meandrina_HIv1___Sc0000016	7271419	7271841	423	172	19	0.9883720930232558	+	UGAUCCUAAAGCAUUUUCUGAA	65	3	2	3	73	91	0	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7496676-7497091	Cluster_4870	Pocillopora_meandrina_HIv1___Sc0000016	7496676	7497091	416	148	30	1.0	+	AUCGGCCGUGGAUUGU	86	136	6	3	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7549557-7549654	Cluster_4871	Pocillopora_meandrina_HIv1___Sc0000016	7549557	7549654	98	19477	365	1.0	+	UCAGUUCCACCAGCUCACCAAU	5411	2389	15	976	8895	7170	32	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7549905-7550358	Cluster_4872	Pocillopora_meandrina_HIv1___Sc0000016	7549905	7550358	454	12036	299	0.99991691591891	+	UCAGUUCCACCAGCUCACCAAU	3526	1244	35	947	5276	4383	151	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7550593-7550685	Cluster_4873	Pocillopora_meandrina_HIv1___Sc0000016	7550593	7550685	93	86236	557	0.9999884039148383	+	UCAGUCCCACCAUCUCACCAAU	39228	13030	179	7445	57991	7312	279	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7553282-7553379	Cluster_4874	Pocillopora_meandrina_HIv1___Sc0000016	7553282	7553379	98	4973	259	0.9997989141363363	+	AGGUGAGCUGUGGGAACUCUUA	2427	413	36	786	3114	535	89	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7555639-7555733	Cluster_4875	Pocillopora_meandrina_HIv1___Sc0000016	7555639	7555733	95	15701	317	1.0	+	UCAGUCCCACCAGCUCACCAAU	3732	3509	41	3605	5490	2995	61	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7556327-7556421	Cluster_4876	Pocillopora_meandrina_HIv1___Sc0000016	7556327	7556421	95	629	85	0.9984101748807631	+	UCAGUUCCACCAGCUCACCAAU	157	90	23	35	252	223	6	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000016:7702668-7703451	Cluster_4877	Pocillopora_meandrina_HIv1___Sc0000016	7702668	7703451	784	2579	199	0.031795269484296236	-	UCGGACUGUGCAUAACCAUUUGCAAAC	1270	153	2234	5	4	72	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7726812-7727228	Cluster_4878	Pocillopora_meandrina_HIv1___Sc0000016	7726812	7727228	417	210	14	1.0	+	UUCCGAAGUCGCGGUC	63	210	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7737325-7737739	Cluster_4879	Pocillopora_meandrina_HIv1___Sc0000016	7737325	7737739	415	117	39	0.9658119658119658	+	GGAGGGGGAGAGCUCUCUUG	37	103	8	3	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7918333-7918749	Cluster_4880	Pocillopora_meandrina_HIv1___Sc0000016	7918333	7918749	417	583	18	0.0	-	AGUGUGCUCUUAACCA	413	575	6	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7925013-7925738	Cluster_4881	Pocillopora_meandrina_HIv1___Sc0000016	7925013	7925738	726	651	214	0.0629800307219662	-	UGAUAAACCUGUAGCUGAAGCUUCUGCA	76	10	612	5	8	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:7981204-7981630	Cluster_4882	Pocillopora_meandrina_HIv1___Sc0000016	7981204	7981630	427	90	30	0.011111111111111112	-	CAGUAUCCUUGUCUUCUGUUGAUGUGUC	21	3	84	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8190428-8190841	Cluster_4883	Pocillopora_meandrina_HIv1___Sc0000016	8190428	8190841	414	206	109	0.970873786407767	+	UAGGAGACUUUACGCUGCGAACGAGCCUUU	11	5	198	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8193241-8193668	Cluster_4884	Pocillopora_meandrina_HIv1___Sc0000016	8193241	8193668	428	164	76	0.9634146341463414	+	UGAAUGCGUAACAUAACUCCGAUCGAGU	28	1	163	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8243509-8243925	Cluster_4885	Pocillopora_meandrina_HIv1___Sc0000016	8243509	8243925	417	476	18	0.0	-	GAGUGUGCUCUUAACCA	290	475	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8250872-8251332	Cluster_4886	Pocillopora_meandrina_HIv1___Sc0000016	8250872	8251332	461	1044	220	0.04118773946360153	-	UGUAAUCUCAAUAUCUACCUCUUGACA	253	11	994	4	21	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8251379-8252098	Cluster_4887	Pocillopora_meandrina_HIv1___Sc0000016	8251379	8252098	720	1077	307	0.9340761374187558	+	UCUUCGUUUUGUACAAAUUCCCACCGA	204	4	1047	1	2	7	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8274017-8274445	Cluster_4888	Pocillopora_meandrina_HIv1___Sc0000016	8274017	8274445	429	128	37	0.015625	-	AUCUAAACGAACUUGUUUUUCUUAUGAGCA	48	0	124	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8355046-8355474	Cluster_4889	Pocillopora_meandrina_HIv1___Sc0000016	8355046	8355474	429	188	49	0.047872340425531915	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	68	2	168	0	0	3	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8546527-8546951	Cluster_4890	Pocillopora_meandrina_HIv1___Sc0000016	8546527	8546951	425	155	61	0.9354838709677419	+	UAACACAAUGAACCAAGGCACGUCCAGA	24	5	141	1	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8551184-8552319	Cluster_4891	Pocillopora_meandrina_HIv1___Sc0000016	8551184	8552319	1136	2762	578	0.9254163649529327	+	UAACACAAUGAACCAAGGCACGUCCAGA	471	25	2609	3	11	54	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8637811-8638451	Cluster_4892	Pocillopora_meandrina_HIv1___Sc0000016	8637811	8638451	641	1291	317	0.008520526723470178	-	UAGGCGUAAAUCUUGACUCCGAUCGACUAA	130	8	1258	3	2	2	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:8955875-8956296	Cluster_4893	Pocillopora_meandrina_HIv1___Sc0000016	8955875	8956296	422	111	55	0.9819819819819819	+	CAUGUAGUUACUCAGGAAGAAGUC	28	11	43	3	13	3	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000016:9066858-9067275	Cluster_4894	Pocillopora_meandrina_HIv1___Sc0000016	9066858	9067275	418	417	17	0.002398081534772182	-	AGCUGUGACCCUCGGGC	197	417	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:52305-52730	Cluster_4895	Pocillopora_meandrina_HIv1___Sc0000017	52305	52730	426	108	41	0.9814814814814815	+	UCCGAUUUAAAAGAUUCUUUGUUUGU	26	1	100	0	2	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:210371-210799	Cluster_4896	Pocillopora_meandrina_HIv1___Sc0000017	210371	210799	429	429	122	0.9533799533799534	+	UGUAGAAUCAAUCUGUUACUAAGACACC	102	0	407	6	2	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:281713-282126	Cluster_4897	Pocillopora_meandrina_HIv1___Sc0000017	281713	282126	414	78	14	0.01282051282051282	-	GGUCUGGAGUCUCGGCUU	28	78	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:390054-390665	Cluster_4898	Pocillopora_meandrina_HIv1___Sc0000017	390054	390665	612	583	145	0.5797598627787307	.	UCACUCGUAAAGAAUCGCUCGUAAAUUGAUC	149	20	521	7	7	11	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:396273-396699	Cluster_4899	Pocillopora_meandrina_HIv1___Sc0000017	396273	396699	427	175	61	0.17714285714285713	-	UGUCAAAUUCUCGUCUUCCUAACCUUU	62	2	170	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:399056-399467	Cluster_4900	Pocillopora_meandrina_HIv1___Sc0000017	399056	399467	412	121	36	0.45454545454545453	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	27	0	120	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:404683-405111	Cluster_4901	Pocillopora_meandrina_HIv1___Sc0000017	404683	405111	429	170	43	0.023529411764705882	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	67	0	170	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:406230-406708	Cluster_4902	Pocillopora_meandrina_HIv1___Sc0000017	406230	406708	479	1753	232	0.0005704506560182544	-	UGGACAAAUUCAUAGGUCUGAUGCAAACAUG	248	40	1680	7	9	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:483166-483771	Cluster_4903	Pocillopora_meandrina_HIv1___Sc0000017	483166	483771	606	1739	303	0.9706728004600345	+	UAGGAACACGAGAAGAUCUAGAAGAAACUCU	276	119	1538	4	35	27	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:484009-484666	Cluster_4904	Pocillopora_meandrina_HIv1___Sc0000017	484009	484666	658	1055	298	0.9355450236966825	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	108	4	1017	5	1	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:484886-485541	Cluster_4905	Pocillopora_meandrina_HIv1___Sc0000017	484886	485541	656	613	311	0.6084828711256117	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	28	7	550	1	4	19	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:485566-486337	Cluster_4906	Pocillopora_meandrina_HIv1___Sc0000017	485566	486337	772	2433	523	0.9276613234689683	+	UGGAUAUACGUACACAAUCUAGGCUAA	807	24	2334	10	6	21	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:566559-566986	Cluster_4907	Pocillopora_meandrina_HIv1___Sc0000017	566559	566986	428	86	9	0.03488372093023256	-	UCGGAUAUAAGGCGGUUAUCAAGCGCUUA	54	2	81	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:575298-575843	Cluster_4908	Pocillopora_meandrina_HIv1___Sc0000017	575298	575843	546	732	302	0.2937158469945355	.	UAACUCCUUACAUUUAUCGCUAUUAAGCUU	40	3	667	8	4	15	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:591378-591902	Cluster_4909	Pocillopora_meandrina_HIv1___Sc0000017	591378	591902	525	246	99	0.34146341463414637	.	GCAACGGAAAUUGUCUGUUCCUCGUUUGGGU	37	9	204	6	5	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:771549-771950	Cluster_4910	Pocillopora_meandrina_HIv1___Sc0000017	771549	771950	402	125	88	0.992	+	GACAGUUGUUCUGUGUGUGU	6	57	40	11	5	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:773602-774099	Cluster_4911	Pocillopora_meandrina_HIv1___Sc0000017	773602	774099	498	429	291	0.9883449883449883	+	GCGGUGUCGUUGCUCAGACA	9	160	141	32	25	25	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:784268-784713	Cluster_4912	Pocillopora_meandrina_HIv1___Sc0000017	784268	784713	446	292	65	0.5547945205479452	.	UAAGAUCUGAUACAUUCUUUGGCGGUG	36	1	278	0	3	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:788139-788564	Cluster_4913	Pocillopora_meandrina_HIv1___Sc0000017	788139	788564	426	79	21	0.0	-	UUGCAAUUGAAGACGAUCUCGGGCGCCCA	47	0	79	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:862335-862763	Cluster_4914	Pocillopora_meandrina_HIv1___Sc0000017	862335	862763	429	83	15	0.0	-	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	39	1	81	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1204140-1204540	Cluster_4915	Pocillopora_meandrina_HIv1___Sc0000017	1204140	1204540	401	114	76	0.0	-	GGGCUGGACAGUGUUUCAGAAGAGACUGGAC	5	24	65	6	2	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1303714-1304136	Cluster_4916	Pocillopora_meandrina_HIv1___Sc0000017	1303714	1304136	423	87	38	0.9770114942528736	+	UUCUUCUACCACUUCUUUUUCAAACAAUGU	20	2	85	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1312169-1312763	Cluster_4917	Pocillopora_meandrina_HIv1___Sc0000017	1312169	1312763	595	332	204	0.6204819277108434	.	UGAGAUCGUGGAAGGCCAAGUUCCUUGC	23	14	298	3	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1324597-1325023	Cluster_4918	Pocillopora_meandrina_HIv1___Sc0000017	1324597	1325023	427	166	56	0.0	-	UGAUUGACGUACGGUAUUUGAGACGC	22	4	153	0	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1379429-1379855	Cluster_4919	Pocillopora_meandrina_HIv1___Sc0000017	1379429	1379855	427	110	31	0.7909090909090909	.	UACGUAACUUUCGGUUUUUCUUUCCGUA	33	4	106	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1550842-1551662	Cluster_4920	Pocillopora_meandrina_HIv1___Sc0000017	1550842	1551662	821	1211	130	0.652353426919901	.	UCUUGUCAAUUCUGUCCAGGGUGAACCA	483	9	1192	1	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1612900-1613329	Cluster_4921	Pocillopora_meandrina_HIv1___Sc0000017	1612900	1613329	430	329	51	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	139	0	327	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1631655-1632082	Cluster_4922	Pocillopora_meandrina_HIv1___Sc0000017	1631655	1632082	428	243	46	0.9506172839506173	+	UAAAGUGUAUAAAAUGGGCUUCUCAGGA	159	1	242	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1636697-1637604	Cluster_4923	Pocillopora_meandrina_HIv1___Sc0000017	1636697	1637604	908	931	365	0.9903329752953813	+	UCUGCAACGGACUUCUAAGGGGUAAAGGC	67	19	898	0	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1638965-1639903	Cluster_4924	Pocillopora_meandrina_HIv1___Sc0000017	1638965	1639903	939	595	229	0.9781512605042016	+	UAUCUUGAACUCUGUAAUGAUGGGUGAC	80	24	561	1	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1641559-1642074	Cluster_4925	Pocillopora_meandrina_HIv1___Sc0000017	1641559	1642074	516	7583	390	0.9997362521429514	+	UGUGUCGAGCUUCUCUUGUAGCAGGAGU	2885	74	7423	4	52	17	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1661006-1661433	Cluster_4926	Pocillopora_meandrina_HIv1___Sc0000017	1661006	1661433	428	107	12	1.0	+	UACCAAGGUCUUGUAGUCUAGUACAACU	60	0	106	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1662584-1663020	Cluster_4927	Pocillopora_meandrina_HIv1___Sc0000017	1662584	1663020	437	503	128	0.011928429423459244	-	UGCGAAAGAAACAGGGAAAGUUUGACGAUG	60	1	437	3	10	28	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1693895-1694324	Cluster_4928	Pocillopora_meandrina_HIv1___Sc0000017	1693895	1694324	430	351	121	0.7207977207977208	.	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	47	4	333	5	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1789680-1790121	Cluster_4929	Pocillopora_meandrina_HIv1___Sc0000017	1789680	1790121	442	384	53	0.9739583333333334	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	162	0	378	2	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1793808-1794252	Cluster_4930	Pocillopora_meandrina_HIv1___Sc0000017	1793808	1794252	445	700	77	0.15428571428571428	-	GUGUAGAUCAGCCGACUUCAACAUGUUU	397	4	673	2	4	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1891308-1891734	Cluster_4931	Pocillopora_meandrina_HIv1___Sc0000017	1891308	1891734	427	79	20	0.012658227848101266	-	CUGGUUCAAACAACGAUCGAGUGGUCAUU	37	0	77	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1900038-1900467	Cluster_4932	Pocillopora_meandrina_HIv1___Sc0000017	1900038	1900467	430	375	55	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	151	2	372	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1926176-1926677	Cluster_4933	Pocillopora_meandrina_HIv1___Sc0000017	1926176	1926677	502	698	127	0.5300859598853869	.	UAAAGUGUAUAAAAUGGGCUUCUCAGGA	125	11	658	2	22	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:1933470-1933898	Cluster_4934	Pocillopora_meandrina_HIv1___Sc0000017	1933470	1933898	429	169	37	0.023668639053254437	-	UUCUAAGUGUCGCUGAUGUGGGGACUAUU	44	6	161	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2080328-2080757	Cluster_4935	Pocillopora_meandrina_HIv1___Sc0000017	2080328	2080757	430	312	52	0.0	-	AGGAUGGACAGUGAUCCAGAAGAGACUAU	121	0	311	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2089210-2089639	Cluster_4936	Pocillopora_meandrina_HIv1___Sc0000017	2089210	2089639	430	303	125	0.9834983498349835	+	UCCAAGGAUCUUAUCGACCUCAUCGUAGUA	94	4	285	0	1	1	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2113863-2114291	Cluster_4937	Pocillopora_meandrina_HIv1___Sc0000017	2113863	2114291	429	152	63	0.05921052631578947	-	UAAGAUAUCGUUAACAACUCGAAGAAGCG	26	0	150	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2186612-2187049	Cluster_4938	Pocillopora_meandrina_HIv1___Sc0000017	2186612	2187049	438	38556	493	2.5936300446104367e-05	-	UGGAUGGACUGUGUUCCAGAAGAGACAGG	14639	182	37806	13	533	11	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2206514-2206944	Cluster_4939	Pocillopora_meandrina_HIv1___Sc0000017	2206514	2206944	431	2298	171	0.999129677980853	+	AGGAUGGACAGUGUUCCAAAAG	748	22	1368	4	894	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2220757-2221169	Cluster_4940	Pocillopora_meandrina_HIv1___Sc0000017	2220757	2221169	413	83	32	1.0	+	AGGAUGGACAGUGUUCCAAAAGAGACUGG	16	5	63	0	13	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2276537-2276951	Cluster_4941	Pocillopora_meandrina_HIv1___Sc0000017	2276537	2276951	415	776	3	1.0	+	GCGACUGCUGCCGGA	774	776	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2455876-2456293	Cluster_4942	Pocillopora_meandrina_HIv1___Sc0000017	2455876	2456293	418	252	8	1.0	+	UGGCCUGAAAAAAAAAAA	169	251	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2473930-2474359	Cluster_4943	Pocillopora_meandrina_HIv1___Sc0000017	2473930	2474359	430	230	45	0.008695652173913044	-	ACAGUCAGUCUAUUAUGCAACGCACCCAAU	116	4	221	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2489765-2490167	Cluster_4944	Pocillopora_meandrina_HIv1___Sc0000017	2489765	2490167	403	272	113	0.003676470588235294	-	UCUGACCAGUAAUAUUAAGUUUGUAUGAUC	24	9	262	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2494345-2495070	Cluster_4945	Pocillopora_meandrina_HIv1___Sc0000017	2494345	2495070	726	2044	293	0.2089041095890411	.	UAUAUGACGAUUUGUACAAAAUGAUGGAC	447	21	1830	34	38	41	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2498020-2498449	Cluster_4946	Pocillopora_meandrina_HIv1___Sc0000017	2498020	2498449	430	164	61	0.006097560975609756	-	UGUAUAUGGUGGAUUGCCAAUGACGGGCGUU	43	2	159	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2543963-2544376	Cluster_4947	Pocillopora_meandrina_HIv1___Sc0000017	2543963	2544376	414	123	93	0.016260162601626018	-	GCGCUGGACUCUGGGUCGGACGGCCCGU	3	63	40	6	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2694841-2695270	Cluster_4948	Pocillopora_meandrina_HIv1___Sc0000017	2694841	2695270	430	156	35	0.0	-	UAAUGUGUGACUUUUUCGCUUUUGUUUUGA	69	0	156	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2737275-2737704	Cluster_4949	Pocillopora_meandrina_HIv1___Sc0000017	2737275	2737704	430	202	36	0.019801980198019802	-	UUCACUCCAGAAUGUUUGGCCUCUUUAGCC	140	2	200	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2780735-2781180	Cluster_4950	Pocillopora_meandrina_HIv1___Sc0000017	2780735	2781180	446	1543	215	0.17692806221646143	-	UCCUUCACUCCAGAAUGUUUGGCCUCUU	147	29	1374	8	7	67	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2897925-2898341	Cluster_4951	Pocillopora_meandrina_HIv1___Sc0000017	2897925	2898341	417	539	25	0.0	-	GAGACUUGAAGCGGG	258	526	6	3	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2985643-2986056	Cluster_4952	Pocillopora_meandrina_HIv1___Sc0000017	2985643	2986056	414	100	64	0.99	+	AUCGAUCCAGCAAAGUGUAGGCA	8	32	26	4	11	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2989912-2990431	Cluster_4953	Pocillopora_meandrina_HIv1___Sc0000017	2989912	2990431	520	613	388	0.9967373572593801	+	CCAGGCUGGCUGAGU	19	366	121	39	35	26	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2993139-2993883	Cluster_4954	Pocillopora_meandrina_HIv1___Sc0000017	2993139	2993883	745	495	359	0.997979797979798	+	AACUACCAAGUUCUGAGCGAAAAUGAU	7	233	115	50	36	28	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2995620-2996138	Cluster_4955	Pocillopora_meandrina_HIv1___Sc0000017	2995620	2996138	519	551	351	0.9981851179673321	+	ACGAAUCGUUGUGGCACAGAUGCUCCA	22	246	181	34	29	26	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:2998480-2998881	Cluster_4956	Pocillopora_meandrina_HIv1___Sc0000017	2998480	2998881	402	131	80	1.0	+	CUCGUCGAUCCUGAAUG	11	84	25	6	8	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3011903-3012317	Cluster_4957	Pocillopora_meandrina_HIv1___Sc0000017	3011903	3012317	415	94	18	1.0	+	GUGGUCCGGACGGUG	46	94	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3046579-3046986	Cluster_4958	Pocillopora_meandrina_HIv1___Sc0000017	3046579	3046986	408	109	88	0.009174311926605505	-	GUACUAGACUGUAAGCCA	4	41	40	3	7	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3160389-3160827	Cluster_4959	Pocillopora_meandrina_HIv1___Sc0000017	3160389	3160827	439	292	146	0.7602739726027398	.	UCUAACGGAUACAGCUGCUGUACUGCU	24	18	254	1	6	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3160835-3161244	Cluster_4960	Pocillopora_meandrina_HIv1___Sc0000017	3160835	3161244	410	97	62	0.27835051546391754	.	GGUUAUACUAGACGUAGAGGUUGCAGUC	12	8	61	1	2	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3161421-3161847	Cluster_4961	Pocillopora_meandrina_HIv1___Sc0000017	3161421	3161847	427	231	106	0.7835497835497836	.	UCACGAAUCUUUGCCAUUGUGAGGCUC	20	6	208	2	3	12	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3163210-3164061	Cluster_4962	Pocillopora_meandrina_HIv1___Sc0000017	3163210	3164061	852	1326	260	0.09351432880844646	-	CGUGUACGACGCCUCUGCCCGAGCUUCAG	383	10	1279	18	2	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3164686-3165391	Cluster_4963	Pocillopora_meandrina_HIv1___Sc0000017	3164686	3165391	706	553	239	0.6600361663652803	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	62	8	529	0	0	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3210425-3210843	Cluster_4964	Pocillopora_meandrina_HIv1___Sc0000017	3210425	3210843	419	149	26	1.0	+	GUGUGUGUCUUUUUUCUCU	59	143	1	5	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3255875-3256290	Cluster_4965	Pocillopora_meandrina_HIv1___Sc0000017	3255875	3256290	416	87	4	0.0	-	CCCUUUCCGAGGUCGU	56	87	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3343078-3344815	Cluster_4966	Pocillopora_meandrina_HIv1___Sc0000017	3343078	3344815	1738	2761	1104	0.961970300615719	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	87	29	2613	11	23	45	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3563626-3564054	Cluster_4967	Pocillopora_meandrina_HIv1___Sc0000017	3563626	3564054	429	356	95	0.0028089887640449437	-	AAGGAAAUUAAUGAUUGUAUAUGUGAGG	49	2	333	1	0	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3564620-3565836	Cluster_4968	Pocillopora_meandrina_HIv1___Sc0000017	3564620	3565836	1217	2122	343	0.003298774740810556	-	UGACAAUCAAACCAUGGACAAACUAAUUUGU	188	34	1934	6	65	20	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3581223-3581652	Cluster_4969	Pocillopora_meandrina_HIv1___Sc0000017	3581223	3581652	430	1840	97	0.0005434782608695652	-	AGUAGAUGCAGUUAGGAAUAAAAUUUUGGA	867	8	1810	4	12	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3581866-3582294	Cluster_4970	Pocillopora_meandrina_HIv1___Sc0000017	3581866	3582294	429	216	48	0.07407407407407407	-	AAGAGAAUCAAGAGCCUGUGCUCCGCGGC	87	9	196	1	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3700714-3701141	Cluster_4971	Pocillopora_meandrina_HIv1___Sc0000017	3700714	3701141	428	100	28	0.07	-	UUUUCAGUAAUUAUGCCAAGCACUCAUCGUC	34	0	97	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3761173-3761589	Cluster_4972	Pocillopora_meandrina_HIv1___Sc0000017	3761173	3761589	417	607	12	0.0032948929159802307	-	GACUCGGCCGUGGAU	330	605	0	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3929273-3929689	Cluster_4973	Pocillopora_meandrina_HIv1___Sc0000017	3929273	3929689	417	153	32	0.006535947712418301	-	CAGCGAUGAUGAAGACG	30	146	5	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3979364-3979924	Cluster_4974	Pocillopora_meandrina_HIv1___Sc0000017	3979364	3979924	561	624	333	0.4358974358974359	.	UUUAUCUGGAUGUACAUUGG	27	358	19	173	48	20	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:3981302-3981865	Cluster_4975	Pocillopora_meandrina_HIv1___Sc0000017	3981302	3981865	564	734	340	0.391008174386921	.	UCUUCCACUCGGCCAUCGU	34	429	5	217	58	14	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4136569-4136996	Cluster_4976	Pocillopora_meandrina_HIv1___Sc0000017	4136569	4136996	428	93	18	0.043010752688172046	-	AACUACUGCUCGUGCUCUAGAUAUGACA	38	0	90	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4143141-4143569	Cluster_4977	Pocillopora_meandrina_HIv1___Sc0000017	4143141	4143569	429	291	42	0.9828178694158075	+	AUUGUCUUUAUGGAUCUACUAGGCCAAA	110	1	290	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4180542-4181079	Cluster_4978	Pocillopora_meandrina_HIv1___Sc0000017	4180542	4181079	538	369	174	0.04065040650406504	-	UGCAGUAUUCCAAGGAACUUCUUUGA	43	11	343	4	4	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4181357-4181905	Cluster_4979	Pocillopora_meandrina_HIv1___Sc0000017	4181357	4181905	549	529	235	0.20793950850661624	.	UUAUUCCUCGCGAUUUUGAAGCAGUUCA	28	33	442	4	8	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4182045-4182481	Cluster_4980	Pocillopora_meandrina_HIv1___Sc0000017	4182045	4182481	437	457	208	0.1772428884026258	-	UAUGACGUUCCAGAAUCUUUGACAAAA	38	3	433	1	4	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4183015-4183444	Cluster_4981	Pocillopora_meandrina_HIv1___Sc0000017	4183015	4183444	430	162	60	0.012345679012345678	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	17	0	159	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4204601-4205017	Cluster_4982	Pocillopora_meandrina_HIv1___Sc0000017	4204601	4205017	417	239	8	1.0	+	CUUGUGAAUAGGCGGUG	206	239	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4261931-4262359	Cluster_4983	Pocillopora_meandrina_HIv1___Sc0000017	4261931	4262359	429	167	32	0.9940119760479041	+	GGUGCCUUUGAUGUCUACUGUGACCAGACA	53	5	161	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4272965-4274234	Cluster_4984	Pocillopora_meandrina_HIv1___Sc0000017	4272965	4274234	1270	3065	888	0.8845024469820555	+	UCCGAUACAAACUGAGCUGCAUUGUCAGAC	312	34	2852	17	16	31	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4274424-4277164	Cluster_4985	Pocillopora_meandrina_HIv1___Sc0000017	4274424	4277164	2741	6409	2222	0.7823373381182712	.	UGAACUCGUGCAACAUCUUGAAGGACA	308	88	5694	66	51	194	316	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4299963-4300364	Cluster_4986	Pocillopora_meandrina_HIv1___Sc0000017	4299963	4300364	402	89	14	0.21348314606741572	.	GUGUUUUUCGGUCUGU	69	71	9	2	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4311274-4311701	Cluster_4987	Pocillopora_meandrina_HIv1___Sc0000017	4311274	4311701	428	206	87	0.9223300970873787	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	82	2	197	1	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4313732-4314141	Cluster_4988	Pocillopora_meandrina_HIv1___Sc0000017	4313732	4314141	410	336	208	0.7351190476190477	.	CGCGGUUACAAAGAAGAUGACAGA	18	3	263	4	7	16	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4314952-4315373	Cluster_4989	Pocillopora_meandrina_HIv1___Sc0000017	4314952	4315373	422	197	88	0.7461928934010152	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	24	7	176	3	4	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4365732-4366159	Cluster_4990	Pocillopora_meandrina_HIv1___Sc0000017	4365732	4366159	428	194	65	1.0	+	GGGGUGGGCAGUUUUUCAAAAGAGAAUGGA	32	23	126	14	12	11	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4379414-4379829	Cluster_4991	Pocillopora_meandrina_HIv1___Sc0000017	4379414	4379829	416	1847	21	1.0	+	UCGGUGGGACCUCCA	908	1847	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4401446-4402222	Cluster_4992	Pocillopora_meandrina_HIv1___Sc0000017	4401446	4402222	777	580	143	0.39655172413793105	.	CCUUUCUACAUCUCUGGCUGCAG	80	19	280	51	7	84	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4404038-4404654	Cluster_4993	Pocillopora_meandrina_HIv1___Sc0000017	4404038	4404654	617	956	287	0.9330543933054394	+	UUCGAGCUAUCACUGAAAGAGGGAGUGGU	97	22	909	5	2	5	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4459675-4460103	Cluster_4994	Pocillopora_meandrina_HIv1___Sc0000017	4459675	4460103	429	110	38	0.0	-	UGACUCAUCUUUUCUUAUUAUUUCUGGCU	22	1	89	4	2	0	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4482226-4482640	Cluster_4995	Pocillopora_meandrina_HIv1___Sc0000017	4482226	4482640	415	120	56	0.6416666666666667	.	UUCGCUGUUAGCUUUGUUCUCUGU	14	10	73	3	2	6	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4517328-4517754	Cluster_4996	Pocillopora_meandrina_HIv1___Sc0000017	4517328	4517754	427	203	67	0.0049261083743842365	-	UGGACGGUGUUUCAGAGGAGACUGGAUG	31	6	160	1	4	7	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4573969-4574396	Cluster_4997	Pocillopora_meandrina_HIv1___Sc0000017	4573969	4574396	428	157	56	0.03821656050955414	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	25	1	149	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4618885-4619312	Cluster_4998	Pocillopora_meandrina_HIv1___Sc0000017	4618885	4619312	428	127	45	0.007874015748031496	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	26	0	123	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4623169-4623669	Cluster_4999	Pocillopora_meandrina_HIv1___Sc0000017	4623169	4623669	501	503	140	0.6282306163021869	.	UAACCUGUGCCACCCAAGCUUCGACUCGA	160	37	415	19	13	13	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4693316-4693727	Cluster_5000	Pocillopora_meandrina_HIv1___Sc0000017	4693316	4693727	412	199	98	0.7035175879396985	.	UCGAUUCCACCGAAAGAAAUAACCUGUA	27	25	132	15	7	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4707666-4708094	Cluster_5001	Pocillopora_meandrina_HIv1___Sc0000017	4707666	4708094	429	198	77	1.0	+	GUGUUUCAAAAAAGACAGGAUGGCUCGGU	31	8	186	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4742250-4742677	Cluster_5002	Pocillopora_meandrina_HIv1___Sc0000017	4742250	4742677	428	193	66	0.9896373056994818	+	GGGGUGGACGGUGUUCCAAAAGAGACUG	32	6	172	1	8	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4763452-4763880	Cluster_5003	Pocillopora_meandrina_HIv1___Sc0000017	4763452	4763880	429	200	73	0.96	+	GGGGUGGACGGUGUUCCAAAAGAGACUG	34	11	172	3	7	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4787179-4787608	Cluster_5004	Pocillopora_meandrina_HIv1___Sc0000017	4787179	4787608	430	91	9	0.989010989010989	+	CACAAGACAAGACUCAGUAUUCGCAAGUUG	75	6	84	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4790270-4790684	Cluster_5005	Pocillopora_meandrina_HIv1___Sc0000017	4790270	4790684	415	110	25	0.0	-	GAGACUUGAAGCGGG	20	107	0	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4866060-4866489	Cluster_5006	Pocillopora_meandrina_HIv1___Sc0000017	4866060	4866489	430	376	26	0.0026595744680851063	-	AAGAUGUCGAGCGUUAGUUUCCAAACGGG	156	10	362	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4883414-4883842	Cluster_5007	Pocillopora_meandrina_HIv1___Sc0000017	4883414	4883842	429	414	125	0.0024154589371980675	-	GCGUCGGUGGUAUAGUGGUGAGCAUAGCU	73	68	307	4	20	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:4972305-4972719	Cluster_5008	Pocillopora_meandrina_HIv1___Sc0000017	4972305	4972719	415	97	22	0.0	-	UUGUAGGCGUGGGUU	21	97	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5041786-5042306	Cluster_5009	Pocillopora_meandrina_HIv1___Sc0000017	5041786	5042306	521	2727	421	0.0	-	UUGCACUGUGAAAAUCUGACA	1157	338	688	1369	58	117	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5050908-5051000	Cluster_5010	Pocillopora_meandrina_HIv1___Sc0000017	5050908	5051000	93	129153	682	0.0	-	AACUGCUGAGAUUCUAUGGAUUU	45976	5739	267	1089	21682	97170	3206	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000017:5144143-5144575	Cluster_5011	Pocillopora_meandrina_HIv1___Sc0000017	5144143	5144575	433	2219	156	0.9995493465525012	+	UGGCUGGACAGUAUUUCAGAAGAGACUUG	836	17	2193	1	4	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5299193-5299608	Cluster_5012	Pocillopora_meandrina_HIv1___Sc0000017	5299193	5299608	416	231	16	0.987012987012987	+	GGUGUGCUCUUAACUA	165	228	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5607872-5608285	Cluster_5013	Pocillopora_meandrina_HIv1___Sc0000017	5607872	5608285	414	118	52	0.00847457627118644	-	GGCGGACGUGUCGGGC	44	87	18	5	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5636506-5636931	Cluster_5014	Pocillopora_meandrina_HIv1___Sc0000017	5636506	5636931	426	384	247	0.7890625	.	UCCGAUUUUCUCAACCGCCUCUUGUCC	11	12	313	6	6	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5637069-5637746	Cluster_5015	Pocillopora_meandrina_HIv1___Sc0000017	5637069	5637746	678	7886	567	0.9972102460055795	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2152	12	7743	5	54	36	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5647951-5648365	Cluster_5016	Pocillopora_meandrina_HIv1___Sc0000017	5647951	5648365	415	80	13	0.125	-	CGGGCUUUCAAAGAUA	52	80	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5785384-5785798	Cluster_5017	Pocillopora_meandrina_HIv1___Sc0000017	5785384	5785798	415	84	7	0.0	-	GAAGUCGGCAAAAUG	41	84	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5824989-5825524	Cluster_5018	Pocillopora_meandrina_HIv1___Sc0000017	5824989	5825524	536	1997	438	0.0	-	UUGGUCUUCUGGCUUCAACAUUA	461	246	648	134	188	597	184	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5874598-5875018	Cluster_5019	Pocillopora_meandrina_HIv1___Sc0000017	5874598	5875018	421	91	36	0.3516483516483517	.	CCAAUACCGAAACAACAUAGAUGAACUAACA	12	2	84	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5875339-5875766	Cluster_5020	Pocillopora_meandrina_HIv1___Sc0000017	5875339	5875766	428	425	90	0.9223529411764706	+	UGUUGUGCUUUUUGUUUGUCUUUGAAAA	181	1	406	2	0	4	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5875966-5876475	Cluster_5021	Pocillopora_meandrina_HIv1___Sc0000017	5875966	5876475	510	441	89	0.9705215419501134	+	AACUACUGCUCGUACUCUAGAUAUGAC	79	14	414	5	4	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:5988289-5988704	Cluster_5022	Pocillopora_meandrina_HIv1___Sc0000017	5988289	5988704	416	232	22	0.9870689655172413	+	UUGGUGGAGAUGGAU	72	230	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6029746-6030162	Cluster_5023	Pocillopora_meandrina_HIv1___Sc0000017	6029746	6030162	417	83	8	0.9879518072289156	+	GACUUGAGGCGGUUGGA	60	82	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6108318-6108792	Cluster_5024	Pocillopora_meandrina_HIv1___Sc0000017	6108318	6108792	475	3087	226	0.9948169744088111	+	UCUCGGUGGGACCUCCG	730	2930	14	29	48	55	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6109021-6109449	Cluster_5025	Pocillopora_meandrina_HIv1___Sc0000017	6109021	6109449	429	248	115	0.008064516129032258	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	42	69	114	6	9	21	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6109524-6110002	Cluster_5026	Pocillopora_meandrina_HIv1___Sc0000017	6109524	6110002	479	940	370	0.02553191489361702	-	GGUCCCAUGGUGUAAUGGUUAGCACUCUG	75	407	363	64	55	29	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6397577-6398003	Cluster_5027	Pocillopora_meandrina_HIv1___Sc0000017	6397577	6398003	427	82	16	0.04878048780487805	-	UAAGAAAAGCGCAAAUGUAGUCAUGUGGA	22	0	82	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6458993-6459407	Cluster_5028	Pocillopora_meandrina_HIv1___Sc0000017	6458993	6459407	415	154	34	0.14935064935064934	-	CCUUUCCGAGGUCGU	106	139	11	2	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6694333-6694803	Cluster_5029	Pocillopora_meandrina_HIv1___Sc0000017	6694333	6694803	471	2225	285	0.001348314606741573	-	GAUAUAAUUCUGCAAUGAUGAGGACA	385	449	1304	122	127	84	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:6794015-6794430	Cluster_5030	Pocillopora_meandrina_HIv1___Sc0000017	6794015	6794430	416	114	18	0.008771929824561403	-	ACUGACGCAGUGCUCA	34	113	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7031277-7033410	Cluster_5031	Pocillopora_meandrina_HIv1___Sc0000017	7031277	7033410	2134	5925	1212	0.03814345991561181	-	UGUAAUACAAAGUCAUGUGCCACCUCUGC	287	69	5687	12	13	57	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7034028-7034455	Cluster_5032	Pocillopora_meandrina_HIv1___Sc0000017	7034028	7034455	428	323	67	0.11145510835913312	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	166	4	288	1	2	0	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7034719-7035146	Cluster_5033	Pocillopora_meandrina_HIv1___Sc0000017	7034719	7035146	428	119	43	0.025210084033613446	-	UACAAGACGUACUGGAGAGCAUUGAACAAAU	22	2	114	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7036864-7037297	Cluster_5034	Pocillopora_meandrina_HIv1___Sc0000017	7036864	7037297	434	308	110	0.38311688311688313	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	68	4	274	2	2	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7101999-7102417	Cluster_5035	Pocillopora_meandrina_HIv1___Sc0000017	7101999	7102417	419	230	24	0.9695652173913043	+	CCUUUGUUCUAAGAUUUGC	59	214	6	8	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7103692-7104222	Cluster_5036	Pocillopora_meandrina_HIv1___Sc0000017	7103692	7104222	531	1059	373	0.0	-	CAUCUCCACUCUAGCCCAUCUGU	70	291	275	179	71	160	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7115531-7115956	Cluster_5037	Pocillopora_meandrina_HIv1___Sc0000017	7115531	7115956	426	340	241	0.0029411764705882353	-	CAGACUGGGAGCUACUUGCUUUA	6	119	123	22	21	31	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7116270-7116676	Cluster_5038	Pocillopora_meandrina_HIv1___Sc0000017	7116270	7116676	407	115	87	0.0	-	GUGCUCUGCCUUUAAAAA	4	65	17	17	4	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7213310-7213741	Cluster_5039	Pocillopora_meandrina_HIv1___Sc0000017	7213310	7213741	432	1774	174	0.002818489289740699	-	UGAAAGGACAUUUACAUUUGAGGAUGG	266	31	1662	44	11	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7235293-7235729	Cluster_5040	Pocillopora_meandrina_HIv1___Sc0000017	7235293	7235729	437	335	76	0.573134328358209	.	UCAAAUAAGGUUGCAUGAGCCUCAUGACC	130	8	300	0	2	12	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7254938-7255365	Cluster_5041	Pocillopora_meandrina_HIv1___Sc0000017	7254938	7255365	428	190	51	0.042105263157894736	-	GUGUGACUCAAGUAAUGGUUAUUGUUGU	54	2	178	0	2	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7255604-7257170	Cluster_5042	Pocillopora_meandrina_HIv1___Sc0000017	7255604	7257170	1567	5437	1140	0.9439028876218503	+	UUAAAUGAAGUUUCCAAUGUUUGACUGUC	797	48	5101	18	35	118	117	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7257234-7257695	Cluster_5043	Pocillopora_meandrina_HIv1___Sc0000017	7257234	7257695	462	531	273	0.8983050847457628	+	UUGGCAAUGAUCCUCUUUAAGUCUUCAAA	21	6	474	5	6	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7257722-7258828	Cluster_5044	Pocillopora_meandrina_HIv1___Sc0000017	7257722	7258828	1107	1909	620	0.9460450497642745	+	UGAAUGUGACACUAUCAUGUUGAGACUGAA	107	40	1803	16	10	15	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7299626-7300051	Cluster_5045	Pocillopora_meandrina_HIv1___Sc0000017	7299626	7300051	426	159	63	0.006289308176100629	-	UUUGAUUGACGUACGGUAUUUGAGACGC	20	4	150	0	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7302129-7302556	Cluster_5046	Pocillopora_meandrina_HIv1___Sc0000017	7302129	7302556	428	199	46	0.010050251256281407	-	UCGUAGAACAUCGCAUUACGAGGACCGA	86	2	196	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7303251-7303777	Cluster_5047	Pocillopora_meandrina_HIv1___Sc0000017	7303251	7303777	527	6614	296	0.9696099183550045	+	UCUGUUUCCAUAUUUGAACGCUGACGAC	3108	40	6363	20	11	20	160	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7321863-7322291	Cluster_5048	Pocillopora_meandrina_HIv1___Sc0000017	7321863	7322291	429	463	65	0.9913606911447084	+	UGAAAGGACAUUUACAUUUGAGGAUGGAG	98	12	425	17	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7343995-7344418	Cluster_5049	Pocillopora_meandrina_HIv1___Sc0000017	7343995	7344418	424	119	24	1.0	+	UCUGUUUCCAUGUUUGAACGCUGACGAC	42	1	116	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7346096-7346508	Cluster_5050	Pocillopora_meandrina_HIv1___Sc0000017	7346096	7346508	413	126	77	0.023809523809523808	-	UGCUCAUAUCUAAUAGAACUACUGCCGUU	18	1	119	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7348006-7348429	Cluster_5051	Pocillopora_meandrina_HIv1___Sc0000017	7348006	7348429	424	108	41	0.0	-	UCUGUUUCCAUGUUUGAACGCUGACGAC	34	1	106	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7409563-7410036	Cluster_5052	Pocillopora_meandrina_HIv1___Sc0000017	7409563	7410036	474	309	127	0.9967637540453075	+	CCGACAUGCCUGACUAUUUCAAACAAGC	47	17	267	9	6	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7410725-7411234	Cluster_5053	Pocillopora_meandrina_HIv1___Sc0000017	7410725	7411234	510	556	136	0.9694244604316546	+	CUGUGGCUCAUGUUAACCCUUUGUAACUG	65	7	543	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7416579-7417006	Cluster_5054	Pocillopora_meandrina_HIv1___Sc0000017	7416579	7417006	428	1605	56	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAA	1381	1	1566	0	0	0	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7448131-7448836	Cluster_5055	Pocillopora_meandrina_HIv1___Sc0000017	7448131	7448836	706	380	143	0.1763157894736842	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	83	0	348	2	1	5	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7465662-7466067	Cluster_5056	Pocillopora_meandrina_HIv1___Sc0000017	7465662	7466067	406	113	65	0.4247787610619469	.	UCUGUUUCCAUAUUUUAACGCUGACGAC	17	0	111	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7508338-7508762	Cluster_5057	Pocillopora_meandrina_HIv1___Sc0000017	7508338	7508762	425	169	69	0.9940828402366864	+	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	18	5	156	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7557760-7558187	Cluster_5058	Pocillopora_meandrina_HIv1___Sc0000017	7557760	7558187	428	291	46	0.9965635738831615	+	UCGUAGAACAUCGCAUUACGAGGACCGA	150	1	288	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7590477-7590904	Cluster_5059	Pocillopora_meandrina_HIv1___Sc0000017	7590477	7590904	428	89	22	0.0	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	39	0	88	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7605253-7605798	Cluster_5060	Pocillopora_meandrina_HIv1___Sc0000017	7605253	7605798	546	274	93	0.9817518248175182	+	UGUACUGAUCUUUGUCUUCUGCAGCCAGA	40	1	270	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7607254-7607681	Cluster_5061	Pocillopora_meandrina_HIv1___Sc0000017	7607254	7607681	428	190	37	0.9894736842105263	+	UGGUAAACUUCCCUAACAUUGGCCUGUG	35	0	188	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7607940-7608367	Cluster_5062	Pocillopora_meandrina_HIv1___Sc0000017	7607940	7608367	428	104	20	0.9807692307692307	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	34	0	104	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7611048-7611495	Cluster_5063	Pocillopora_meandrina_HIv1___Sc0000017	7611048	7611495	448	445	109	0.43595505617977526	.	AUAGCUCGAACGAGGACUCGUCCUUAACA	87	6	387	1	6	5	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7629197-7629671	Cluster_5064	Pocillopora_meandrina_HIv1___Sc0000017	7629197	7629671	475	335	105	0.3970149253731343	.	UCUGUUUCCAUAUUUGAACACUGUCGAC	103	10	303	4	2	3	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7631065-7632147	Cluster_5065	Pocillopora_meandrina_HIv1___Sc0000017	7631065	7632147	1083	7336	248	0.0004089422028353326	-	UUUCCAUAUUUGAACGCUGACGACAGUAGG	4937	5	7330	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7632391-7632822	Cluster_5066	Pocillopora_meandrina_HIv1___Sc0000017	7632391	7632822	432	353	86	0.0	-	UGUUGAUUCUUUUCCAUUUAAUACAAU	43	3	342	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7635624-7636052	Cluster_5067	Pocillopora_meandrina_HIv1___Sc0000017	7635624	7636052	429	114	33	0.017543859649122806	-	UCGGAUCUGAAAAAAACUGCGUUUGUUUUC	25	2	111	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7636103-7636532	Cluster_5068	Pocillopora_meandrina_HIv1___Sc0000017	7636103	7636532	430	162	79	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	36	0	156	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7636880-7637309	Cluster_5069	Pocillopora_meandrina_HIv1___Sc0000017	7636880	7637309	430	146	52	0.0	-	UGUACGCGUAUCUCUUGUUUAUCGAGCUUU	50	2	143	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7639204-7639914	Cluster_5070	Pocillopora_meandrina_HIv1___Sc0000017	7639204	7639914	711	430	126	0.004651162790697674	-	UGUCAAAUCUUCAAUUGGUCUCUGUGCCGGA	76	0	418	7	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7640771-7641262	Cluster_5071	Pocillopora_meandrina_HIv1___Sc0000017	7640771	7641262	492	501	184	0.001996007984031936	-	UGGGCAUCCAUCUAUAAAAGUGGGAAAGUU	60	2	486	6	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7707419-7707848	Cluster_5072	Pocillopora_meandrina_HIv1___Sc0000017	7707419	7707848	430	359	105	1.0	+	UGACCCAAUAAGUGGACUUCCGUAUUCC	54	2	319	0	1	33	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7726734-7727160	Cluster_5073	Pocillopora_meandrina_HIv1___Sc0000017	7726734	7727160	427	183	65	0.0	-	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	20	2	171	4	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7809959-7810434	Cluster_5074	Pocillopora_meandrina_HIv1___Sc0000017	7809959	7810434	476	298	116	1.0	+	CCGACAUGCCUGACUAUUUCAAACAAGC	35	17	258	6	6	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7811089-7811591	Cluster_5075	Pocillopora_meandrina_HIv1___Sc0000017	7811089	7811591	503	1705	222	0.9624633431085043	+	UCGUAGAACAUCGCAUUACGAGGACCGA	817	6	1660	4	5	19	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7824092-7824816	Cluster_5076	Pocillopora_meandrina_HIv1___Sc0000017	7824092	7824816	725	6335	329	0.00015785319652722967	-	UUUCCAUAUUUGAACGCUGACGACAGUACGU	1604	3	6257	1	2	7	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7827790-7828211	Cluster_5077	Pocillopora_meandrina_HIv1___Sc0000017	7827790	7828211	422	83	30	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	35	0	82	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7839161-7839570	Cluster_5078	Pocillopora_meandrina_HIv1___Sc0000017	7839161	7839570	410	103	51	0.7961165048543689	.	UGAAAGGACAUUUACAUUUGAGGAUGGAGG	11	6	92	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7872587-7874183	Cluster_5079	Pocillopora_meandrina_HIv1___Sc0000017	7872587	7874183	1597	10151	866	0.0008866121564377894	-	UUUCCAUAUUUGAACGCUGACGACAGUAGG	4903	60	9999	13	13	54	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7876569-7876996	Cluster_5080	Pocillopora_meandrina_HIv1___Sc0000017	7876569	7876996	428	214	98	0.0	-	UAGUGUAUACCUGAAGAUCUAUUUUUAGC	16	4	206	0	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7877574-7878003	Cluster_5081	Pocillopora_meandrina_HIv1___Sc0000017	7877574	7878003	430	158	74	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	34	0	158	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7880962-7881390	Cluster_5082	Pocillopora_meandrina_HIv1___Sc0000017	7880962	7881390	429	150	45	0.0	-	UAAAUCUUGCAUUGGAACCACUUGGCGCG	26	1	148	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7885546-7885972	Cluster_5083	Pocillopora_meandrina_HIv1___Sc0000017	7885546	7885972	427	239	127	0.0041841004184100415	-	UGCUAAAUGUGUCUUCGUCGGUAUUACGU	15	3	233	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7910611-7911035	Cluster_5084	Pocillopora_meandrina_HIv1___Sc0000017	7910611	7911035	425	224	100	0.5178571428571429	.	CUGUGGCUCAUGUUAACCCUUUGUAACC	34	5	211	3	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7957991-7958416	Cluster_5085	Pocillopora_meandrina_HIv1___Sc0000017	7957991	7958416	426	188	68	0.9946808510638298	+	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	19	4	167	2	1	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7971859-7972287	Cluster_5086	Pocillopora_meandrina_HIv1___Sc0000017	7971859	7972287	429	154	34	0.025974025974025976	-	UACGACGUGGUUCGGAGGCAGUGUGACCA	26	1	148	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7980367-7980781	Cluster_5087	Pocillopora_meandrina_HIv1___Sc0000017	7980367	7980781	415	73	5	1.0	+	CUUUCCGAGGUCGCA	64	73	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:7997759-7998189	Cluster_5088	Pocillopora_meandrina_HIv1___Sc0000017	7997759	7998189	431	393	67	0.9949109414758269	+	UCUGUUUCUAUAUUUGAACGCUGACGAC	87	2	385	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8006653-8007086	Cluster_5089	Pocillopora_meandrina_HIv1___Sc0000017	8006653	8007086	434	840	81	0.9976190476190476	+	UUUCCAUAUUUGAACGCUGACGACAGUAC	223	2	821	1	0	1	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8014796-8015205	Cluster_5090	Pocillopora_meandrina_HIv1___Sc0000017	8014796	8015205	410	159	66	0.006289308176100629	-	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	17	3	145	5	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8043563-8043996	Cluster_5091	Pocillopora_meandrina_HIv1___Sc0000017	8043563	8043996	434	701	70	0.011412268188302425	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	256	8	678	1	1	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8073302-8076351	Cluster_5092	Pocillopora_meandrina_HIv1___Sc0000017	8073302	8076351	3050	73604	4530	0.04395141568393022	-	UGAUCAUGGAUUCUAAACUGGUAAUGGCC	23109	732	69808	262	236	1004	1562	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8086133-8086560	Cluster_5093	Pocillopora_meandrina_HIv1___Sc0000017	8086133	8086560	428	156	24	1.0	+	UCUGUUUCCAUAUUUGGACGCUGACGAC	96	0	155	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8099388-8100423	Cluster_5094	Pocillopora_meandrina_HIv1___Sc0000017	8099388	8100423	1036	2117	581	0.2021728861596599	.	UCGAUCAAUUGGCCUAUAUGAUUCUU	144	41	1675	25	14	132	230	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8106102-8106537	Cluster_5095	Pocillopora_meandrina_HIv1___Sc0000017	8106102	8106537	436	192	76	1.0	+	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	26	1	188	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8115360-8116284	Cluster_5096	Pocillopora_meandrina_HIv1___Sc0000017	8115360	8116284	925	12383	525	1.0	+	UUUCCAUAUUUGAACGCUGACGACAGUAC	2383	9	12208	2	5	10	149	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8161609-8162037	Cluster_5097	Pocillopora_meandrina_HIv1___Sc0000017	8161609	8162037	429	226	70	0.9778761061946902	+	UGACCCAAUAAGUGGACUUCCGUAUUCC	34	5	198	1	0	18	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8171890-8172377	Cluster_5098	Pocillopora_meandrina_HIv1___Sc0000017	8171890	8172377	488	54756	595	1.0	+	UUUCCAUAUUUGAACGCUGACGACAGUACA	14861	19	53916	10	12	33	766	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8180906-8181326	Cluster_5099	Pocillopora_meandrina_HIv1___Sc0000017	8180906	8181326	421	181	76	0.0055248618784530384	-	ACUUUCGUCAGUCUUCAAAUAUGGAAACAGA	16	7	164	2	5	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8209815-8210249	Cluster_5100	Pocillopora_meandrina_HIv1___Sc0000017	8209815	8210249	435	10648	320	0.004132231404958678	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	4194	12	10344	4	16	9	263	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8261341-8261768	Cluster_5101	Pocillopora_meandrina_HIv1___Sc0000017	8261341	8261768	428	143	21	0.0	-	UCUGUUUCCAUAUUUGAACACUGUCGAC	95	0	135	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8261986-8262485	Cluster_5102	Pocillopora_meandrina_HIv1___Sc0000017	8261986	8262485	500	344	84	0.06976744186046512	-	UGUUGGAGACGGUCAUUUUCUGAAAGGA	100	7	324	2	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8265837-8266260	Cluster_5103	Pocillopora_meandrina_HIv1___Sc0000017	8265837	8266260	424	120	41	0.6583333333333333	.	UUUCCAUACUUGAACGCUGACGACAGUAGG	27	1	109	2	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8280144-8280570	Cluster_5104	Pocillopora_meandrina_HIv1___Sc0000017	8280144	8280570	427	569	135	0.2478031634446397	.	AUUGAUUCUAUUUUGUACGGCCUAGU	187	1	543	1	3	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8284831-8285250	Cluster_5105	Pocillopora_meandrina_HIv1___Sc0000017	8284831	8285250	420	81	33	0.9876543209876543	+	UGAAAGGACAUUUACAUUUGAGGAUGG	10	6	71	3	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8285928-8286355	Cluster_5106	Pocillopora_meandrina_HIv1___Sc0000017	8285928	8286355	428	109	38	0.981651376146789	+	UCGUAGAACAUCGCAUUACGAGGACCGA	45	2	104	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8345457-8345870	Cluster_5107	Pocillopora_meandrina_HIv1___Sc0000017	8345457	8345870	414	158	74	0.9873417721518988	+	CCGACAUGCAUGACUAUUUCAAACAAGC	23	5	138	5	5	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8355853-8356266	Cluster_5108	Pocillopora_meandrina_HIv1___Sc0000017	8355853	8356266	414	265	137	0.9849056603773585	+	UGUAACAGCUCUUGUGUCUUCAGGCCUCGA	22	4	253	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8356873-8357301	Cluster_5109	Pocillopora_meandrina_HIv1___Sc0000017	8356873	8357301	429	1494	153	0.9933065595716198	+	UCUUUCGGUUCUUUGGUGAGGUCGCCAUC	685	49	1439	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8359861-8360291	Cluster_5110	Pocillopora_meandrina_HIv1___Sc0000017	8359861	8360291	431	230	125	0.9304347826086956	+	UCCCGAUCGCGAAUAUCGAACCGUCGAUAUG	29	1	208	0	3	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8361688-8362276	Cluster_5111	Pocillopora_meandrina_HIv1___Sc0000017	8361688	8362276	589	54421	1164	9.187629775270575e-05	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	22166	82	53935	17	32	199	156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8411027-8411454	Cluster_5112	Pocillopora_meandrina_HIv1___Sc0000017	8411027	8411454	428	144	40	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAC	40	0	144	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8418421-8418852	Cluster_5113	Pocillopora_meandrina_HIv1___Sc0000017	8418421	8418852	432	194	78	0.0	-	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	32	0	193	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8424151-8425401	Cluster_5114	Pocillopora_meandrina_HIv1___Sc0000017	8424151	8425401	1251	5300	758	0.959622641509434	+	UCGAUCAAUUGGCUUAUAUGAUUCUU	639	27	5042	11	12	60	148	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8437082-8437511	Cluster_5115	Pocillopora_meandrina_HIv1___Sc0000017	8437082	8437511	430	1322	160	0.057488653555219364	-	UGUGAUUGCAUGGCUGGUCUUGGAGAGAGC	382	43	1057	36	17	71	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8439842-8440269	Cluster_5116	Pocillopora_meandrina_HIv1___Sc0000017	8439842	8440269	428	178	25	0.0	-	UCUGUUUCCAUAUUUGGACGCUGACGAC	98	0	172	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8450021-8450534	Cluster_5117	Pocillopora_meandrina_HIv1___Sc0000017	8450021	8450534	514	10085	639	0.854933068914229	+	UACGAUCACGUCCGCCAUUAUCACUGAC	2609	36	9135	36	39	282	557	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8458470-8458895	Cluster_5118	Pocillopora_meandrina_HIv1___Sc0000017	8458470	8458895	426	141	45	0.12056737588652482	-	UCUGUUUCCAUAUUUGAACACUGACGAC	33	11	117	7	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8472664-8473118	Cluster_5119	Pocillopora_meandrina_HIv1___Sc0000017	8472664	8473118	455	297	114	1.0	+	CCGACAUGCCUGACUAUUUCAAACAAGC	36	23	247	10	3	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8478790-8479217	Cluster_5120	Pocillopora_meandrina_HIv1___Sc0000017	8478790	8479217	428	1715	57	0.0	-	UCUGUUUCCAUAUUUGAACGCUGACGAA	1434	0	1658	0	1	1	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8485860-8486289	Cluster_5121	Pocillopora_meandrina_HIv1___Sc0000017	8485860	8486289	430	113	17	0.0	-	UGGACUUCCGUAUUCCUCUAGAAUAAGAUA	82	0	113	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8491348-8491803	Cluster_5122	Pocillopora_meandrina_HIv1___Sc0000017	8491348	8491803	456	563	150	0.0017761989342806395	-	UCUUCAAUUGGUCUCUGUGCCGGACUGA	64	10	451	25	4	8	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8521175-8521606	Cluster_5123	Pocillopora_meandrina_HIv1___Sc0000017	8521175	8521606	432	384	63	1.0	+	UCUGUUUCUAUAUUUGAACGCUGACGAC	91	0	382	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8533693-8534118	Cluster_5124	Pocillopora_meandrina_HIv1___Sc0000017	8533693	8534118	426	175	60	0.0	-	CCGACAUGCAUGACUAUUUCAAACAAGC	22	3	168	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8579114-8579615	Cluster_5125	Pocillopora_meandrina_HIv1___Sc0000017	8579114	8579615	502	372	136	0.21236559139784947	.	UGUACUGUUUGUAUUUUUUUUCCUGGG	45	6	313	6	11	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8588735-8589162	Cluster_5126	Pocillopora_meandrina_HIv1___Sc0000017	8588735	8589162	428	118	30	0.9830508474576272	+	UACGACGUGGUUCGGAGGCAGUGUGACC	21	2	114	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8589297-8589725	Cluster_5127	Pocillopora_meandrina_HIv1___Sc0000017	8589297	8589725	429	367	87	0.9209809264305178	+	UGUUGGAGACGGUCAUUUUCUGAAAGGA	106	1	355	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8600200-8600944	Cluster_5128	Pocillopora_meandrina_HIv1___Sc0000017	8600200	8600944	745	474	254	0.79957805907173	.	UGUAAACUUGAGAGUCGUCAGCGUAACA	20	1	431	1	11	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8602143-8602976	Cluster_5129	Pocillopora_meandrina_HIv1___Sc0000017	8602143	8602976	834	574	238	0.06445993031358885	-	UCUGAUCUCCAUUUGAGUACAUCGAACACUC	44	3	553	1	2	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8614396-8614831	Cluster_5130	Pocillopora_meandrina_HIv1___Sc0000017	8614396	8614831	436	13309	415	0.9982718461191675	+	UCUGUUUCCAUAUUUGAACGCUGACGAU	4116	144	12640	20	127	105	273	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8622621-8623331	Cluster_5131	Pocillopora_meandrina_HIv1___Sc0000017	8622621	8623331	711	868	259	0.9953917050691244	+	UGUCAAAUCUUCAAUUGGUCUCUGUGCCGGA	86	2	844	14	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8623502-8623931	Cluster_5132	Pocillopora_meandrina_HIv1___Sc0000017	8623502	8623931	430	269	118	1.0	+	UGUUUCAAUCUGUUCUAUACCCUCUUGG	18	2	262	1	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8626007-8626568	Cluster_5133	Pocillopora_meandrina_HIv1___Sc0000017	8626007	8626568	562	340	163	1.0	+	UAUUUCUAAGCUUCAGAUCUGGCUACUGUC	29	7	323	0	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8629991-8631498	Cluster_5134	Pocillopora_meandrina_HIv1___Sc0000017	8629991	8631498	1508	14798	1263	0.9856737396945533	+	UUUCCAUAUUUGAACGCUGACGACAGUAGG	3223	265	14332	13	29	131	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8631650-8632066	Cluster_5135	Pocillopora_meandrina_HIv1___Sc0000017	8631650	8632066	417	117	58	1.0	+	UCCUUCACCUUCGAUCUCAAAGUAAUGUUC	13	0	116	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8636006-8636685	Cluster_5136	Pocillopora_meandrina_HIv1___Sc0000017	8636006	8636685	680	628	252	0.8550955414012739	+	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	34	13	573	7	2	12	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8642086-8642602	Cluster_5137	Pocillopora_meandrina_HIv1___Sc0000017	8642086	8642602	517	1861	307	0.9108006448146158	+	UACGACGUGGUUCUGAGGCAGCGUGACC	128	15	1770	5	8	19	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8642733-8643702	Cluster_5138	Pocillopora_meandrina_HIv1___Sc0000017	8642733	8643702	970	1019	340	0.5014720314033366	.	UCUGUUUCCAUAUUUGAACACUGUCGAC	101	10	946	8	17	16	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8654467-8654883	Cluster_5139	Pocillopora_meandrina_HIv1___Sc0000017	8654467	8654883	417	139	15	0.9856115107913669	+	GCCGGGAUAGCUCAGUC	66	135	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8660635-8661065	Cluster_5140	Pocillopora_meandrina_HIv1___Sc0000017	8660635	8661065	431	566	144	0.9558303886925795	+	UUUACAACGUCCGGCUUGACCAUUUACA	69	5	533	2	7	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8715732-8716380	Cluster_5141	Pocillopora_meandrina_HIv1___Sc0000017	8715732	8716380	649	496	216	0.9314516129032258	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	25	10	447	4	3	9	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8855629-8856058	Cluster_5142	Pocillopora_meandrina_HIv1___Sc0000017	8855629	8856058	430	191	24	1.0	+	UUGAUCCAUGUUAUGACUAUCCGACUGACA	46	2	187	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8903791-8904209	Cluster_5143	Pocillopora_meandrina_HIv1___Sc0000017	8903791	8904209	419	88	27	1.0	+	GCCUUGUAGAAUUCUUUGUAGG	13	39	13	7	16	11	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:8971228-8971653	Cluster_5144	Pocillopora_meandrina_HIv1___Sc0000017	8971228	8971653	426	149	46	0.006711409395973154	-	CACUUCCUGAUUUUAACCACAACUGUGUGGU	42	12	123	1	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9006632-9007115	Cluster_5145	Pocillopora_meandrina_HIv1___Sc0000017	9006632	9007115	484	467	210	0.9528907922912205	+	UUCAAUGGGAAAACGAGAAUAGCGUGAGU	21	32	301	17	8	30	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9062627-9063057	Cluster_5146	Pocillopora_meandrina_HIv1___Sc0000017	9062627	9063057	431	10918	429	0.9995420406667888	+	GCGUUGGUGGUAUAGUGGUGAGCAUAGCU	3816	297	10418	20	36	91	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9089557-9089973	Cluster_5147	Pocillopora_meandrina_HIv1___Sc0000017	9089557	9089973	417	1020	28	0.0029411764705882353	-	CUUUCCGAGGUCACA	765	1019	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9090045-9090720	Cluster_5148	Pocillopora_meandrina_HIv1___Sc0000017	9090045	9090720	676	8001	558	0.0032495938007749033	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2120	8	7879	4	43	30	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9090774-9092546	Cluster_5149	Pocillopora_meandrina_HIv1___Sc0000017	9090774	9092546	1773	9275	2432	0.07256064690026955	-	UGAUAGACUGCACGACGAUUUACGUCA	540	98	8440	59	85	274	319	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9151739-9152167	Cluster_5150	Pocillopora_meandrina_HIv1___Sc0000017	9151739	9152167	429	259	60	0.9845559845559846	+	AAGGAGUUAACGACAAGUUGAAGGCGAAG	67	7	226	8	3	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000017:9244465-9244894	Cluster_5151	Pocillopora_meandrina_HIv1___Sc0000017	9244465	9244894	430	237	102	0.9662447257383966	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	74	3	229	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:79690-80104	Cluster_5152	Pocillopora_meandrina_HIv1___Sc0000018	79690	80104	415	82	12	0.012195121951219513	-	UCCCCGCGUCUCCACCA	25	82	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:125517-125940	Cluster_5153	Pocillopora_meandrina_HIv1___Sc0000018	125517	125940	424	9346	166	0.0010699764605178687	-	UCUGACGAAGGGCUGACACUCA	5714	221	12	2739	6168	131	75	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:167341-167766	Cluster_5154	Pocillopora_meandrina_HIv1___Sc0000018	167341	167766	426	80	25	0.975	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	0	78	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:177215-177766	Cluster_5155	Pocillopora_meandrina_HIv1___Sc0000018	177215	177766	552	323	102	0.015479876160990712	-	UGUGACUGAAAAGAUCCUGAAGGAACUGAAC	77	25	288	1	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:204995-205696	Cluster_5156	Pocillopora_meandrina_HIv1___Sc0000018	204995	205696	702	269	135	0.9182156133828996	+	UGUACUUUGUCUUUGUUGAAUUUGAUUC	27	6	258	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:206928-207353	Cluster_5157	Pocillopora_meandrina_HIv1___Sc0000018	206928	207353	426	257	144	0.8754863813229572	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	20	2	238	3	3	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:218817-219711	Cluster_5158	Pocillopora_meandrina_HIv1___Sc0000018	218817	219711	895	825	336	0.7127272727272728	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	124	14	710	11	10	20	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:246943-247783	Cluster_5159	Pocillopora_meandrina_HIv1___Sc0000018	246943	247783	841	814	133	0.004914004914004914	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	190	3	742	0	63	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:255356-256079	Cluster_5160	Pocillopora_meandrina_HIv1___Sc0000018	255356	256079	724	1111	286	0.046804680468046804	-	UUGUGUUGCUAACAUCGUCCUCUAUCUUG	87	18	1005	3	17	12	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:267369-267831	Cluster_5161	Pocillopora_meandrina_HIv1___Sc0000018	267369	267831	463	1127	184	0.03904170363797693	-	UAUUCACACGUGUUAUCUCGUCGCUCG	138	3	1084	1	1	0	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:269536-270067	Cluster_5162	Pocillopora_meandrina_HIv1___Sc0000018	269536	270067	532	2133	271	0.4763244256915143	.	UUCUAGCUCGACUUCACGCU	236	1022	179	365	467	95	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:290221-290739	Cluster_5163	Pocillopora_meandrina_HIv1___Sc0000018	290221	290739	519	516	136	0.003875968992248062	-	AGAUUACUCAUGCGGCCUUUUGGAUAAGA	83	11	489	7	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:303788-304217	Cluster_5164	Pocillopora_meandrina_HIv1___Sc0000018	303788	304217	430	922	74	0.0010845986984815619	-	GAAAUUCGGAGUGGCUGCUUAUUUCAUAGC	540	4	914	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:317638-318339	Cluster_5165	Pocillopora_meandrina_HIv1___Sc0000018	317638	318339	702	296	156	0.9324324324324325	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	31	2	277	3	5	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:319569-319998	Cluster_5166	Pocillopora_meandrina_HIv1___Sc0000018	319569	319998	430	249	143	0.8273092369477911	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	32	1	217	1	5	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:325038-325443	Cluster_5167	Pocillopora_meandrina_HIv1___Sc0000018	325038	325443	406	228	153	0.09210526315789473	-	GAGAUGGAUGGAGACG	6	92	91	12	13	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:342075-342489	Cluster_5168	Pocillopora_meandrina_HIv1___Sc0000018	342075	342489	415	205	65	0.0	-	UGGGUUCUGUUGGAA	127	160	20	4	6	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:396275-396705	Cluster_5169	Pocillopora_meandrina_HIv1___Sc0000018	396275	396705	431	4218	160	0.0011853959222380276	-	UGAUGAACUAGAGAACCAGUGCU	1112	19	857	5	37	2986	314	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:454437-454858	Cluster_5170	Pocillopora_meandrina_HIv1___Sc0000018	454437	454858	422	141	72	0.851063829787234	+	ACUACCGUGAGACUGAAGAACACAACUAUA	11	19	88	9	1	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:456707-457148	Cluster_5171	Pocillopora_meandrina_HIv1___Sc0000018	456707	457148	442	413	43	0.7796610169491526	.	AUCAGCAAGAAAAGCAGGUGCC	105	10	267	1	107	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:467842-468271	Cluster_5172	Pocillopora_meandrina_HIv1___Sc0000018	467842	468271	430	206	38	0.9951456310679612	+	GUGAGUCUGAUACAUCUUGCCGCACAUGGA	99	2	151	0	1	9	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:776830-777245	Cluster_5173	Pocillopora_meandrina_HIv1___Sc0000018	776830	777245	416	123	12	0.008130081300813009	-	AACAAGAAUAGAGGCA	84	122	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:781042-781472	Cluster_5174	Pocillopora_meandrina_HIv1___Sc0000018	781042	781472	431	196	65	0.00510204081632653	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	27	1	194	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:784358-784785	Cluster_5175	Pocillopora_meandrina_HIv1___Sc0000018	784358	784785	428	133	50	0.9699248120300752	+	UGAUUGCAGAGCACAGCAUUGCCACC	18	6	121	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:844183-844587	Cluster_5176	Pocillopora_meandrina_HIv1___Sc0000018	844183	844587	405	96	38	0.6354166666666666	.	GUAUCUGCACUUGACU	26	71	16	1	2	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:1177770-1178195	Cluster_5177	Pocillopora_meandrina_HIv1___Sc0000018	1177770	1178195	426	159	61	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	18	0	154	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2098006-2098514	Cluster_5178	Pocillopora_meandrina_HIv1___Sc0000018	2098006	2098514	509	7438	1198	0.9995966657703684	+	GCUAGUGAUGACAAAAAGAUGACGAGCCUGA	405	1954	3020	644	644	547	629	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2098964-2099438	Cluster_5179	Pocillopora_meandrina_HIv1___Sc0000018	2098964	2099438	475	13754	1035	0.9984004653191799	+	AUAGAAUGAUGAUGCUUUAGACUAGAGU	1958	3162	7487	534	379	1574	618	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2099479-2099957	Cluster_5180	Pocillopora_meandrina_HIv1___Sc0000018	2099479	2099957	479	4341	467	1.0	+	AUAUCUGAUGAAAACCCCUUUCUGACA	448	684	3172	184	123	126	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2100300-2101798	Cluster_5181	Pocillopora_meandrina_HIv1___Sc0000018	2100300	2101798	1499	11469	1716	0.9990408928415729	+	GAUAAGUCACGUCAGUCUGAUU	559	5830	2363	724	1365	645	542	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2102107-2102876	Cluster_5182	Pocillopora_meandrina_HIv1___Sc0000018	2102107	2102876	770	7399	906	1.0	+	GUGGAAUGAUGUAAAAACUU	699	4528	943	599	382	461	486	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2328246-2328664	Cluster_5183	Pocillopora_meandrina_HIv1___Sc0000018	2328246	2328664	419	321	11	0.9906542056074766	+	GGUGUGUGAUGACUGAAA	131	321	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2367661-2368074	Cluster_5184	Pocillopora_meandrina_HIv1___Sc0000018	2367661	2368074	414	281	180	0.010676156583629894	-	CUGACUUGAGGAAAUUGCCAUGAUA	17	107	100	16	15	19	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2443250-2443677	Cluster_5185	Pocillopora_meandrina_HIv1___Sc0000018	2443250	2443677	428	419	196	0.011933174224343675	-	CAGUGGAAGCGUGCU	22	249	103	23	25	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2462000-2462480	Cluster_5186	Pocillopora_meandrina_HIv1___Sc0000018	2462000	2462480	481	420	133	1.0	+	AGCAGAUGAUGAUUAUGACC	25	106	143	53	48	38	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2542917-2544876	Cluster_5187	Pocillopora_meandrina_HIv1___Sc0000018	2542917	2544876	1960	5391	1456	0.06195511036913374	-	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	469	32	5166	12	20	52	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2564907-2565323	Cluster_5188	Pocillopora_meandrina_HIv1___Sc0000018	2564907	2565323	417	526	30	0.0	-	GCUACUUUGACCUCACA	222	526	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2582233-2582685	Cluster_5189	Pocillopora_meandrina_HIv1___Sc0000018	2582233	2582685	453	5739	178	0.0013939710751001916	-	UUUAUUCUGAUAUCAGGGUCACCACCCU	1384	54	4750	154	57	677	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2693273-2693700	Cluster_5190	Pocillopora_meandrina_HIv1___Sc0000018	2693273	2693700	428	126	55	0.9920634920634921	+	UGAGAUCGUGAUGAAAAUUAUUGCUGGAUU	37	21	93	7	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2695721-2696135	Cluster_5191	Pocillopora_meandrina_HIv1___Sc0000018	2695721	2696135	415	631	31	1.0	+	GCGGAUGUGGCGGAA	349	616	5	2	5	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2797804-2798222	Cluster_5192	Pocillopora_meandrina_HIv1___Sc0000018	2797804	2798222	419	1120	40	1.0	+	UGCCCGGGUCCUCCACCA	547	1120	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2808567-2808976	Cluster_5193	Pocillopora_meandrina_HIv1___Sc0000018	2808567	2808976	410	133	80	0.13533834586466165	-	UGAAUUGAUACGUACUCUCUGAUAUCU	9	1	121	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:2886488-2886905	Cluster_5194	Pocillopora_meandrina_HIv1___Sc0000018	2886488	2886905	418	91	4	0.01098901098901099	-	UUGAACUCGACCCUGUCG	86	90	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3029533-3029960	Cluster_5195	Pocillopora_meandrina_HIv1___Sc0000018	3029533	3029960	428	112	22	0.8482142857142857	+	AUUGAAGAUAUUUCAGCGGCUGAGUUGA	78	2	107	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3274720-3275233	Cluster_5196	Pocillopora_meandrina_HIv1___Sc0000018	3274720	3275233	514	232	142	0.004310344827586207	-	AAUUGAAGUGGAAUAAAAGCA	18	69	60	39	25	23	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3276305-3276958	Cluster_5197	Pocillopora_meandrina_HIv1___Sc0000018	3276305	3276958	654	356	215	0.008426966292134831	-	UUCGCAUCUCGGGAAGA	21	184	105	17	14	9	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3348228-3348658	Cluster_5198	Pocillopora_meandrina_HIv1___Sc0000018	3348228	3348658	431	1122	77	0.9857397504456328	+	GUGUAGAUCAGCCGACUUCAACAUGUUUC	301	4	1106	0	1	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3520326-3520879	Cluster_5199	Pocillopora_meandrina_HIv1___Sc0000018	3520326	3520879	554	2010	148	0.9771144278606965	+	UCGUAUUCUUUUCCAUCCUCGCCGAACAGA	635	5	1958	2	4	13	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3750631-3751057	Cluster_5200	Pocillopora_meandrina_HIv1___Sc0000018	3750631	3751057	427	193	107	0.8393782383419689	+	UGAGUCGAGGUUAUUCACAAUACGAGC	38	4	166	1	8	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:3869724-3870153	Cluster_5201	Pocillopora_meandrina_HIv1___Sc0000018	3869724	3870153	430	237	48	0.0	-	UGAUCAAUUUGUGAAUGUCUGCACACCACU	75	2	233	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4040818-4041232	Cluster_5202	Pocillopora_meandrina_HIv1___Sc0000018	4040818	4041232	415	73	15	0.0	-	GUGUGUGAUGACUGAAAAAA	14	72	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4194708-4195136	Cluster_5203	Pocillopora_meandrina_HIv1___Sc0000018	4194708	4195136	429	173	7	0.9942196531791907	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	147	0	173	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4273656-4274071	Cluster_5204	Pocillopora_meandrina_HIv1___Sc0000018	4273656	4274071	416	1614	15	0.9993804213135068	+	CCGGCUGUCGCACCA	953	1613	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4337764-4338188	Cluster_5205	Pocillopora_meandrina_HIv1___Sc0000018	4337764	4338188	425	615	99	1.0	+	UAGAUCAAGUGUGGUUACUUUAAU	104	54	53	82	113	149	164	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4414758-4415184	Cluster_5206	Pocillopora_meandrina_HIv1___Sc0000018	4414758	4415184	427	208	53	0.004807692307692308	-	CGCGUUUCGAUCGUCAACGUAGGGGAGG	35	4	201	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4484034-4484452	Cluster_5207	Pocillopora_meandrina_HIv1___Sc0000018	4484034	4484452	419	856	30	0.9941588785046729	+	CGGCCUGAAAAAAAAAA	267	824	1	17	11	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4508024-4508579	Cluster_5208	Pocillopora_meandrina_HIv1___Sc0000018	4508024	4508579	556	5560	593	0.0014388489208633094	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1213	33	5501	1	9	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4508612-4510664	Cluster_5209	Pocillopora_meandrina_HIv1___Sc0000018	4508612	4510664	2053	3066	1294	0.017938682322243965	-	UGACCACGAGCAUUCUGAAUAUCGAGAUUC	76	21	2907	14	9	29	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4564884-4564976	Cluster_5210	Pocillopora_meandrina_HIv1___Sc0000018	4564884	4564976	93	522	63	0.9980842911877394	+	UAACCUUAUUUGUCUUCACAUGU	136	40	0	41	117	268	56	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000018:4621884-4622307	Cluster_5211	Pocillopora_meandrina_HIv1___Sc0000018	4621884	4622307	424	112	44	0.9553571428571429	+	UGUUGUAUCAAGCGAAAACCGAGAGA	14	10	96	1	0	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4692501-4692940	Cluster_5212	Pocillopora_meandrina_HIv1___Sc0000018	4692501	4692940	440	260	139	0.0038461538461538464	-	GCAGUCAUUGUGGCAAGUGUGUAAUAUCU	12	48	142	25	24	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4839414-4839830	Cluster_5213	Pocillopora_meandrina_HIv1___Sc0000018	4839414	4839830	417	232	149	0.9827586206896551	+	AAUUACUCGAGAUCUUGGAACA	12	84	62	12	27	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4870098-4870516	Cluster_5214	Pocillopora_meandrina_HIv1___Sc0000018	4870098	4870516	419	181	97	0.0055248618784530384	-	GGUCAAGGAUGAUAAUCUCU	12	58	51	30	15	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4873669-4874121	Cluster_5215	Pocillopora_meandrina_HIv1___Sc0000018	4873669	4874121	453	901	57	0.9988901220865705	+	UGGUAGAACCAACUUCGUGUCGA	477	19	8	1	97	756	20	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:4969282-4969712	Cluster_5216	Pocillopora_meandrina_HIv1___Sc0000018	4969282	4969712	431	177	64	1.0	+	AAACCGAUACUUCUACCGUUCAACCUGAGA	20	28	112	1	15	13	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5069169-5069664	Cluster_5217	Pocillopora_meandrina_HIv1___Sc0000018	5069169	5069664	496	458	195	0.9956331877729258	+	GUAGUCGUGGCCGAGG	135	315	64	28	23	16	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5070502-5070916	Cluster_5218	Pocillopora_meandrina_HIv1___Sc0000018	5070502	5070916	415	130	96	0.9923076923076923	+	CGCUUGGUCAAGGACAUGAAGAUCA	4	44	53	7	9	9	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5071007-5071630	Cluster_5219	Pocillopora_meandrina_HIv1___Sc0000018	5071007	5071630	624	617	369	0.9773095623987034	+	GUACGUCGUGGCUACUGGGGUAACA	41	203	259	36	35	41	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5072027-5072447	Cluster_5220	Pocillopora_meandrina_HIv1___Sc0000018	5072027	5072447	421	319	231	0.9968652037617555	+	AGGGGAACUGGUAUUGUGUCU	5	130	113	24	24	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5072563-5073052	Cluster_5221	Pocillopora_meandrina_HIv1___Sc0000018	5072563	5073052	490	365	262	0.9972602739726028	+	CCUGGCAAAGAAUCACUCAGGACAGAGAGCU	8	139	133	28	19	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5104121-5105290	Cluster_5222	Pocillopora_meandrina_HIv1___Sc0000018	5104121	5105290	1170	1816	364	0.23733480176211455	.	UCAACGCUUAGCAGACUGGUUUAGUGAUC	220	21	1638	3	7	22	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5127916-5128340	Cluster_5223	Pocillopora_meandrina_HIv1___Sc0000018	5127916	5128340	425	121	24	0.9834710743801653	+	AGUGAUUGAAAAAAAAAAAAAAAAAAA	18	3	83	4	4	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5153909-5154328	Cluster_5224	Pocillopora_meandrina_HIv1___Sc0000018	5153909	5154328	420	73	12	0.0	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	50	0	73	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5399535-5399962	Cluster_5225	Pocillopora_meandrina_HIv1___Sc0000018	5399535	5399962	428	125	31	0.0	-	UGAACUACUGCUCGUACUCUAGAUGACA	20	0	124	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5727822-5728237	Cluster_5226	Pocillopora_meandrina_HIv1___Sc0000018	5727822	5728237	416	98	26	0.0	-	CAAAUUUGAAAUCUCCGA	41	92	3	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5914049-5914457	Cluster_5227	Pocillopora_meandrina_HIv1___Sc0000018	5914049	5914457	409	86	54	0.38372093023255816	.	UAGCACGACGUUUGGAAUAGG	6	48	6	13	5	14	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5932011-5932789	Cluster_5228	Pocillopora_meandrina_HIv1___Sc0000018	5932011	5932789	779	795	353	0.37735849056603776	.	UGUAUUCACUUGGGUUAACUCUUCCACA	101	21	691	2	11	18	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5934317-5934745	Cluster_5229	Pocillopora_meandrina_HIv1___Sc0000018	5934317	5934745	429	456	130	0.039473684210526314	-	UGUAGAAUCAAUCUGUUACUAAGACACC	99	2	440	4	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5946594-5947626	Cluster_5230	Pocillopora_meandrina_HIv1___Sc0000018	5946594	5947626	1033	4396	790	0.02570518653321201	-	UGUACUGGUUCUUCAAAUGCUUAACUUUGC	751	28	4224	7	12	55	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5962547-5963374	Cluster_5231	Pocillopora_meandrina_HIv1___Sc0000018	5962547	5963374	828	1808	602	0.37444690265486724	.	UGUAUCUGGUUUUUCUGUCUUGAACAAUG	193	46	1423	31	22	187	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5979022-5979452	Cluster_5232	Pocillopora_meandrina_HIv1___Sc0000018	5979022	5979452	431	1457	89	0.0	-	UUCCAGAACAGAGAACCUCUCCCGAUGACC	608	12	1435	0	3	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5985449-5986116	Cluster_5233	Pocillopora_meandrina_HIv1___Sc0000018	5985449	5986116	668	918	170	0.002178649237472767	-	UCUGGUACUUGGACGAUCAACAUGCC	176	12	893	0	0	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5987227-5987656	Cluster_5234	Pocillopora_meandrina_HIv1___Sc0000018	5987227	5987656	430	196	19	0.0	-	UACGAAACUCAUGAUGACAAACAACAAAUG	113	0	195	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5988897-5989560	Cluster_5235	Pocillopora_meandrina_HIv1___Sc0000018	5988897	5989560	664	257	117	0.019455252918287938	-	UCUCUGCUCCUUGAACUGAUAUUAUGAAGC	29	4	236	4	2	7	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:5992644-5993138	Cluster_5236	Pocillopora_meandrina_HIv1___Sc0000018	5992644	5993138	495	1373	249	0.010924981791697014	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	265	3	1344	3	3	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6015913-6016348	Cluster_5237	Pocillopora_meandrina_HIv1___Sc0000018	6015913	6016348	436	842	144	0.0035629453681710215	-	UGAUUUAUUCCACUCUGAUAUCGUACAG	232	45	787	2	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6018266-6018690	Cluster_5238	Pocillopora_meandrina_HIv1___Sc0000018	6018266	6018690	425	241	141	0.06224066390041494	-	UGACUUCGUAUCGGUCUUCGCUCCAUGCA	12	2	226	1	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6023501-6023925	Cluster_5239	Pocillopora_meandrina_HIv1___Sc0000018	6023501	6023925	425	126	14	0.9682539682539683	+	GUGAAGACGAUUAAGUUGACUGGGG	57	6	106	0	0	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6024504-6024931	Cluster_5240	Pocillopora_meandrina_HIv1___Sc0000018	6024504	6024931	428	215	64	0.06046511627906977	-	UGAUGUCUGCUACUUCCUCUUUUUCAGG	35	4	203	1	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6025057-6025753	Cluster_5241	Pocillopora_meandrina_HIv1___Sc0000018	6025057	6025753	697	1188	361	0.3686868686868687	.	ACAUGACUUAUCUCCAGAAGAAUUUGAGG	93	17	1059	8	38	15	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6026053-6026481	Cluster_5242	Pocillopora_meandrina_HIv1___Sc0000018	6026053	6026481	429	194	106	0.1134020618556701	-	UCAUCUUUAGUAAAACUGAAAACGUUGUGGA	14	4	180	2	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6041457-6042847	Cluster_5243	Pocillopora_meandrina_HIv1___Sc0000018	6041457	6042847	1391	2916	672	0.12311385459533608	-	UUUCAAAUGCUUUUGUAGAUCAUCUCCAAA	485	47	2786	9	12	32	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6044345-6045176	Cluster_5244	Pocillopora_meandrina_HIv1___Sc0000018	6044345	6045176	832	454	176	0.0881057268722467	-	UUCUGAAGUACUUUCCCAAUAACAUUGAAA	52	7	414	3	5	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6049558-6049986	Cluster_5245	Pocillopora_meandrina_HIv1___Sc0000018	6049558	6049986	429	252	80	0.0	-	UGAUCUGCUCGAACGUGACUUAGCACUAC	29	2	242	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6052012-6052435	Cluster_5246	Pocillopora_meandrina_HIv1___Sc0000018	6052012	6052435	424	111	47	0.0	-	UGACAGUGCGUGAUCUUCUCUUGAUGUU	24	5	102	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6052990-6053419	Cluster_5247	Pocillopora_meandrina_HIv1___Sc0000018	6052990	6053419	430	249	111	0.0	-	UCUAGUUAACGGUUUGUCUUUGAGAACGAC	37	5	237	0	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6054042-6054708	Cluster_5248	Pocillopora_meandrina_HIv1___Sc0000018	6054042	6054708	667	286	101	0.0	-	UUGGACUGUGCAGCCUUAAUCAGGAACAAC	79	20	211	40	11	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6055724-6056149	Cluster_5249	Pocillopora_meandrina_HIv1___Sc0000018	6055724	6056149	426	86	37	0.0	-	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	12	0	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6060238-6060667	Cluster_5250	Pocillopora_meandrina_HIv1___Sc0000018	6060238	6060667	430	206	74	0.0	-	UUCACGUGCUUGACUCUUUCACCCCAGAUA	27	6	198	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6060683-6061195	Cluster_5251	Pocillopora_meandrina_HIv1___Sc0000018	6060683	6061195	513	309	107	0.009708737864077669	-	UGAGACUAUAGAGCCUGCUACAAUUAAGGU	43	51	250	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6061223-6061651	Cluster_5252	Pocillopora_meandrina_HIv1___Sc0000018	6061223	6061651	429	124	40	0.0	-	UUGAUUUCUGCUUCAAGGGACUGUUGUGG	49	3	121	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6066391-6066817	Cluster_5253	Pocillopora_meandrina_HIv1___Sc0000018	6066391	6066817	427	178	74	0.016853932584269662	-	UGUUUGUCGAUUAGGCUGAGAAAUUUGUGU	12	25	143	5	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6067322-6067752	Cluster_5254	Pocillopora_meandrina_HIv1___Sc0000018	6067322	6067752	431	1351	128	0.0051813471502590676	-	UGACUCAACUUUACGUAACUUAUGGCUUU	250	14	1286	0	4	9	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6068424-6068852	Cluster_5255	Pocillopora_meandrina_HIv1___Sc0000018	6068424	6068852	429	147	57	0.05442176870748299	-	CAGGUAUAGGUUACUCAAGAUUAAUUGAU	34	8	124	2	9	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6073845-6074272	Cluster_5256	Pocillopora_meandrina_HIv1___Sc0000018	6073845	6074272	428	317	119	0.006309148264984227	-	UAGGACAGUACAUGGUGUAGCUACCAUCAUC	43	6	307	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6075188-6075808	Cluster_5257	Pocillopora_meandrina_HIv1___Sc0000018	6075188	6075808	621	393	136	0.01272264631043257	-	UGCGAACUCCAAACUUUCUGUAUCCACAGC	46	9	377	0	4	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6083880-6084581	Cluster_5258	Pocillopora_meandrina_HIv1___Sc0000018	6083880	6084581	702	532	151	0.02443609022556391	-	UAUGACGGUACUUUCAAUGGCUUCAGGC	132	14	477	3	16	13	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6085167-6085592	Cluster_5259	Pocillopora_meandrina_HIv1___Sc0000018	6085167	6085592	426	176	85	0.022727272727272728	-	UGAUUGACGUACGGUAUUUGAGACGC	14	7	158	2	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6086451-6088566	Cluster_5260	Pocillopora_meandrina_HIv1___Sc0000018	6086451	6088566	2116	20995	3802	0.019480828768754465	-	UGUGAUCUUGUAGAGUUUCAGAAAAUGA	1643	184	20278	55	64	191	223	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6090997-6091424	Cluster_5261	Pocillopora_meandrina_HIv1___Sc0000018	6090997	6091424	428	292	129	0.017123287671232876	-	CUGUUGCUGAAUUCGAUACCCAUUUUCGG	18	5	282	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6092880-6093306	Cluster_5262	Pocillopora_meandrina_HIv1___Sc0000018	6092880	6093306	427	230	102	0.02608695652173913	-	UUGGCUGUGCUUUGCUGAAUCUUGUCC	16	5	221	2	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6098947-6099535	Cluster_5263	Pocillopora_meandrina_HIv1___Sc0000018	6098947	6099535	589	243	116	0.00411522633744856	-	UCCUCGAUCUCGUUUUGAAUAGUUUCAAC	23	4	237	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6100825-6101227	Cluster_5264	Pocillopora_meandrina_HIv1___Sc0000018	6100825	6101227	403	186	102	0.0	-	UGGCAGUAGAAUGGGGUUCCUCGAGUUC	8	3	181	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6103919-6104805	Cluster_5265	Pocillopora_meandrina_HIv1___Sc0000018	6103919	6104805	887	2532	366	0.04186413902053712	-	AUCCCACUCCUGACACCA	624	1429	1036	9	4	14	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6108751-6109178	Cluster_5266	Pocillopora_meandrina_HIv1___Sc0000018	6108751	6109178	428	121	25	0.024793388429752067	-	UAACCCGAGAACUGACACGUGAGUAGUC	79	4	107	3	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6110873-6111291	Cluster_5267	Pocillopora_meandrina_HIv1___Sc0000018	6110873	6111291	419	190	83	0.010526315789473684	-	UCUUUAAUCUUGUGUAGUACUCCUAUCAGU	22	5	181	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6111313-6111742	Cluster_5268	Pocillopora_meandrina_HIv1___Sc0000018	6111313	6111742	430	241	115	0.004149377593360996	-	UGACUCUUGGUAAUCUGAACUGAUCUC	21	12	224	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6112787-6113215	Cluster_5269	Pocillopora_meandrina_HIv1___Sc0000018	6112787	6113215	429	133	38	0.015037593984962405	-	AUCCUGUACAAUUCUGUAUAUCAGACCAUG	36	6	118	0	5	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6161081-6161508	Cluster_5270	Pocillopora_meandrina_HIv1___Sc0000018	6161081	6161508	428	93	24	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	1	89	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6241773-6242189	Cluster_5271	Pocillopora_meandrina_HIv1___Sc0000018	6241773	6242189	417	167	24	0.0718562874251497	-	CGUGGUGGACUGCUUAC	116	163	2	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6362099-6362513	Cluster_5272	Pocillopora_meandrina_HIv1___Sc0000018	6362099	6362513	415	98	11	0.01020408163265306	-	UCCCACUCUGAUCACCA	37	98	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6492736-6493260	Cluster_5273	Pocillopora_meandrina_HIv1___Sc0000018	6492736	6493260	525	1273	156	0.9984289080911233	+	CGACCAAAAAUCUUCUAGUGGGGGCUGGA	695	12	1229	6	15	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6621203-6621632	Cluster_5274	Pocillopora_meandrina_HIv1___Sc0000018	6621203	6621632	430	146	31	0.0	-	UCUAAGACAAUAAUUGGUACUGCAACG	40	0	146	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6654618-6655045	Cluster_5275	Pocillopora_meandrina_HIv1___Sc0000018	6654618	6655045	428	126	35	0.0	-	UCUAAGACAAUAAUUGGUACUGCAACGAGU	34	1	125	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6671296-6671836	Cluster_5276	Pocillopora_meandrina_HIv1___Sc0000018	6671296	6671836	541	580	244	0.8517241379310345	+	UGUAUGAUGUUCAGGAUUUCAGGUCUGA	31	33	513	1	4	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6672102-6672809	Cluster_5277	Pocillopora_meandrina_HIv1___Sc0000018	6672102	6672809	708	1942	407	0.94129763130793	+	UGAUGUGAUUUCCUGUUUGACUUGGUU	169	20	1856	4	11	22	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6674039-6674468	Cluster_5278	Pocillopora_meandrina_HIv1___Sc0000018	6674039	6674468	430	266	148	0.8947368421052632	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	30	2	245	0	1	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6855499-6855592	Cluster_5279	Pocillopora_meandrina_HIv1___Sc0000018	6855499	6855592	94	6818	305	1.0	+	GGAUUAAAAUUUGUUGGGUGUGC	1218	740	316	516	435	3365	1446	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000018:6857660-6858086	Cluster_5280	Pocillopora_meandrina_HIv1___Sc0000018	6857660	6858086	427	19692	326	1.0	+	CUCCGAACAGUUUUAGUCUGA	5559	4276	138	6383	1435	4617	2843	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6967801-6968229	Cluster_5281	Pocillopora_meandrina_HIv1___Sc0000018	6967801	6968229	429	88	17	0.0	-	UCCAGCAUCUGAACAAGUCAUGUAAAAUACC	45	0	85	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6980526-6981623	Cluster_5282	Pocillopora_meandrina_HIv1___Sc0000018	6980526	6981623	1098	1634	489	0.13280293757649939	-	UCCUUGAGCAUUAUAGAAAACUGGGCUUA	116	37	1331	58	47	89	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:6981728-6982155	Cluster_5283	Pocillopora_meandrina_HIv1___Sc0000018	6981728	6982155	428	383	117	0.09399477806788512	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	95	5	361	2	4	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7025700-7026117	Cluster_5284	Pocillopora_meandrina_HIv1___Sc0000018	7025700	7026117	418	187	34	0.9946524064171123	+	UCCGGCUCGAAGGACCA	52	184	1	2	0	0	0	N	N	mse-miR-2779;ipu-miR-7550;oni-miR-7550
Pocillopora_meandrina_HIv1___Sc0000018:7138820-7139235	Cluster_5285	Pocillopora_meandrina_HIv1___Sc0000018	7138820	7139235	416	306	219	0.9869281045751634	+	AUAAGAUGUUGUCGUGUGCU	7	125	100	19	26	15	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7593444-7593872	Cluster_5286	Pocillopora_meandrina_HIv1___Sc0000018	7593444	7593872	429	160	89	0.99375	+	GAUGACUACGUUAAAAGAUUACUGAACGCU	20	27	109	2	11	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7623762-7624181	Cluster_5287	Pocillopora_meandrina_HIv1___Sc0000018	7623762	7624181	420	85	34	0.9647058823529412	+	CUGUUAGAACCUGACCAAGCAU	11	10	25	14	14	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7694980-7695392	Cluster_5288	Pocillopora_meandrina_HIv1___Sc0000018	7694980	7695392	413	91	34	0.0989010989010989	-	AACUACUGCUCGUACUCUAGAUAUGAU	20	16	69	3	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7843989-7844410	Cluster_5289	Pocillopora_meandrina_HIv1___Sc0000018	7843989	7844410	422	4315	99	0.9988412514484357	+	UGAAAAUCUUUGCUCUGA	1409	3820	0	414	32	6	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7849913-7850377	Cluster_5290	Pocillopora_meandrina_HIv1___Sc0000018	7849913	7850377	465	313	161	0.019169329073482427	-	UUGUAGGCGUGGGUU	28	209	43	24	27	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7852651-7853079	Cluster_5291	Pocillopora_meandrina_HIv1___Sc0000018	7852651	7853079	429	2621	98	1.0	+	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1585	0	2610	2	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7863900-7864328	Cluster_5292	Pocillopora_meandrina_HIv1___Sc0000018	7863900	7864328	429	177	64	0.9774011299435028	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	53	3	159	0	0	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7864532-7864959	Cluster_5293	Pocillopora_meandrina_HIv1___Sc0000018	7864532	7864959	428	163	60	0.9386503067484663	+	ACAAGCGAUAUGUGGACCUUGAUCUGCGA	26	1	160	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7869456-7869886	Cluster_5294	Pocillopora_meandrina_HIv1___Sc0000018	7869456	7869886	431	233	56	0.9484978540772532	+	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	46	2	223	2	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7966082-7967275	Cluster_5295	Pocillopora_meandrina_HIv1___Sc0000018	7966082	7967275	1194	1168	476	0.07448630136986302	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	116	11	1078	2	5	25	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7967561-7969176	Cluster_5296	Pocillopora_meandrina_HIv1___Sc0000018	7967561	7969176	1616	2903	1078	0.061660351360661385	-	UCGGACAUGACGUGUGAAAGAACCGCGCC	109	29	2720	11	9	50	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7969310-7969754	Cluster_5297	Pocillopora_meandrina_HIv1___Sc0000018	7969310	7969754	445	352	160	0.02556818181818182	-	UGACUAUCUGUUCUGGAAUUCCAAAUC	21	1	346	1	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:7999960-8000374	Cluster_5298	Pocillopora_meandrina_HIv1___Sc0000018	7999960	8000374	415	118	6	0.9745762711864406	+	AAAUCGGCCGUGGAC	96	116	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8063916-8065986	Cluster_5299	Pocillopora_meandrina_HIv1___Sc0000018	8063916	8065986	2071	6003	1436	0.08612360486423455	-	UGUGAAUACUUCAGCUGGCCAACGAUC	844	141	5427	68	53	115	199	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8066079-8066502	Cluster_5300	Pocillopora_meandrina_HIv1___Sc0000018	8066079	8066502	424	674	106	0.028189910979228485	-	AAGGAAACUCUCACGUAUGAAGA	304	139	100	5	37	365	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8128517-8129091	Cluster_5301	Pocillopora_meandrina_HIv1___Sc0000018	8128517	8129091	575	878	280	0.15375854214123008	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	130	6	821	5	4	15	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8129368-8129860	Cluster_5302	Pocillopora_meandrina_HIv1___Sc0000018	8129368	8129860	493	936	280	0.11538461538461539	-	UAUAUAUCCUCUGUGAUUGUCUGAUCAC	184	8	868	5	6	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8130166-8131142	Cluster_5303	Pocillopora_meandrina_HIv1___Sc0000018	8130166	8131142	977	1141	274	0.08851884312007012	-	UUAACUCCGAUCCGAUGACCUAGAAAGU	144	9	1097	2	3	6	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8131538-8132215	Cluster_5304	Pocillopora_meandrina_HIv1___Sc0000018	8131538	8132215	678	267	156	0.06367041198501873	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	27	4	247	4	0	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8253613-8254028	Cluster_5305	Pocillopora_meandrina_HIv1___Sc0000018	8253613	8254028	416	153	77	0.8954248366013072	+	UUGUUGAUUUUCUCUUGAAGAGUUUGGA	11	2	147	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8255315-8255732	Cluster_5306	Pocillopora_meandrina_HIv1___Sc0000018	8255315	8255732	418	147	27	0.9727891156462585	+	GGCCGUGGUCGAGGUGAA	42	143	2	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8312293-8312720	Cluster_5307	Pocillopora_meandrina_HIv1___Sc0000018	8312293	8312720	428	161	33	0.968944099378882	+	UCUUGCUUUGGGCUAACGAUAAGACGUG	42	1	156	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8324947-8325369	Cluster_5308	Pocillopora_meandrina_HIv1___Sc0000018	8324947	8325369	423	125	55	0.736	.	UCGUGCAAUUUUGAGAACUUUCA	61	20	19	2	5	74	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8380667-8381089	Cluster_5309	Pocillopora_meandrina_HIv1___Sc0000018	8380667	8381089	423	376	57	0.9787234042553191	+	UUCGCGUCUGAAGCUGUUAGAGU	166	29	12	6	81	240	8	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8453579-8454328	Cluster_5310	Pocillopora_meandrina_HIv1___Sc0000018	8453579	8454328	750	803	264	0.9688667496886675	+	UGAACGAUCUUUCCGACAGGUUCUCAACU	73	1	779	4	1	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8454611-8455933	Cluster_5311	Pocillopora_meandrina_HIv1___Sc0000018	8454611	8455933	1323	1606	731	0.9178082191780822	+	UCUGUACAGGAAUUAUACGAAUAAUGGC	36	18	1485	5	5	19	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8545759-8546159	Cluster_5312	Pocillopora_meandrina_HIv1___Sc0000018	8545759	8546159	401	167	87	0.023952095808383235	-	UAAUUCAAUUUUUGGAGGAACAGGGACGUU	26	3	151	3	2	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8546193-8547525	Cluster_5313	Pocillopora_meandrina_HIv1___Sc0000018	8546193	8547525	1333	1863	624	0.1202361782071927	-	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	450	26	1749	5	14	19	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8548058-8548777	Cluster_5314	Pocillopora_meandrina_HIv1___Sc0000018	8548058	8548777	720	399	177	0.09523809523809523	-	UGUGUCAGAACCCGGCUUGCAUAAGUGA	98	5	363	2	2	23	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8548969-8549396	Cluster_5315	Pocillopora_meandrina_HIv1___Sc0000018	8548969	8549396	428	143	66	0.013986013986013986	-	UAGGUAUACCGUGAUUGGAGAAAUGGCGUU	16	0	141	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8549583-8550019	Cluster_5316	Pocillopora_meandrina_HIv1___Sc0000018	8549583	8550019	437	2231	361	0.010309278350515464	-	UGAUGUAACCGUGAUCUUUGAAGGCCCGA	397	7	2158	16	3	8	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8573136-8573551	Cluster_5317	Pocillopora_meandrina_HIv1___Sc0000018	8573136	8573551	416	158	3	0.9936708860759493	+	CGCGGGAUAGAGCAGU	145	158	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000018:8575007-8575423	Cluster_5318	Pocillopora_meandrina_HIv1___Sc0000018	8575007	8575423	417	167	22	0.0	-	AGCGUGGCUAGUUGACU	57	167	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:18658-19086	Cluster_5319	Pocillopora_meandrina_HIv1___Sc0000019	18658	19086	429	196	41	0.00510204081632653	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	85	0	187	0	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:37218-37646	Cluster_5320	Pocillopora_meandrina_HIv1___Sc0000019	37218	37646	429	179	46	0.01675977653631285	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	76	0	168	0	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:55061-55491	Cluster_5321	Pocillopora_meandrina_HIv1___Sc0000019	55061	55491	431	388	74	0.01804123711340206	-	UGAUGAGCGAUAUCGCAGAACAGCUGCUGA	66	1	384	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:55801-56229	Cluster_5322	Pocillopora_meandrina_HIv1___Sc0000019	55801	56229	429	179	40	0.0223463687150838	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	80	1	165	0	0	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:75217-76278	Cluster_5323	Pocillopora_meandrina_HIv1___Sc0000019	75217	76278	1062	3167	682	0.6150931480896747	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	405	34	2888	15	54	55	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:154260-154856	Cluster_5324	Pocillopora_meandrina_HIv1___Sc0000019	154260	154856	597	5651	517	0.9969916828879845	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	785	18	5587	4	4	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:173786-174200	Cluster_5325	Pocillopora_meandrina_HIv1___Sc0000019	173786	174200	415	103	7	0.9902912621359223	+	UUCCGAGGUCGCGGG	74	103	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:182875-183304	Cluster_5326	Pocillopora_meandrina_HIv1___Sc0000019	182875	183304	430	295	43	0.0	-	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	114	0	295	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:184691-185100	Cluster_5327	Pocillopora_meandrina_HIv1___Sc0000019	184691	185100	410	77	36	0.8181818181818182	+	UCUUUCCAUUUACAGACUCAAGUGGCUGU	20	1	73	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:187362-187790	Cluster_5328	Pocillopora_meandrina_HIv1___Sc0000019	187362	187790	429	117	45	0.0	-	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	41	0	107	1	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:213664-214087	Cluster_5329	Pocillopora_meandrina_HIv1___Sc0000019	213664	214087	424	1534	94	1.0	+	UACAAAAUGUGCUUCAGGUCCAAU	647	120	38	103	60	308	905	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:410966-411377	Cluster_5330	Pocillopora_meandrina_HIv1___Sc0000019	410966	411377	412	256	175	0.0	-	CUUCUGUUCUGGAAAUUCUUGACA	8	64	128	18	10	10	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:412392-413053	Cluster_5331	Pocillopora_meandrina_HIv1___Sc0000019	412392	413053	662	527	376	0.0018975332068311196	-	CUCGGCUUUUGUGGAGAGGGU	19	169	164	62	42	44	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:414464-414890	Cluster_5332	Pocillopora_meandrina_HIv1___Sc0000019	414464	414890	427	327	219	0.0061162079510703364	-	AUCGAGUUUGGAGAGCUGUAAGGAGUUGA	13	100	132	33	18	18	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:422640-423056	Cluster_5333	Pocillopora_meandrina_HIv1___Sc0000019	422640	423056	417	188	14	0.005319148936170213	-	GAUGAGGCUCAUAAAA	57	187	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:454047-454847	Cluster_5334	Pocillopora_meandrina_HIv1___Sc0000019	454047	454847	801	1558	525	0.05648267008985879	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	208	21	1450	9	14	34	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:646583-647106	Cluster_5335	Pocillopora_meandrina_HIv1___Sc0000019	646583	647106	524	1374	238	0.024017467248908297	-	UUUGAUAUAAAGGUUGUGGAAAAACAGU	154	23	1281	6	8	26	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:697656-698070	Cluster_5336	Pocillopora_meandrina_HIv1___Sc0000019	697656	698070	415	86	23	0.046511627906976744	-	UGGCACUUGAAUUCUAC	25	45	27	10	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:813193-813621	Cluster_5337	Pocillopora_meandrina_HIv1___Sc0000019	813193	813621	429	419	105	0.026252983293556086	-	UGUAGAAUCAAUCUGUUACUAAGACACC	112	3	401	5	6	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:904555-904984	Cluster_5338	Pocillopora_meandrina_HIv1___Sc0000019	904555	904984	430	208	38	0.009615384615384616	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	95	3	203	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:905738-906334	Cluster_5339	Pocillopora_meandrina_HIv1___Sc0000019	905738	906334	597	5606	525	0.0035676061362825543	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	810	16	5536	1	5	18	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1035043-1035449	Cluster_5340	Pocillopora_meandrina_HIv1___Sc0000019	1035043	1035449	407	166	112	0.012048192771084338	-	AACAGAAACUGACGCGUCA	9	60	63	11	14	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1236348-1236769	Cluster_5341	Pocillopora_meandrina_HIv1___Sc0000019	1236348	1236769	422	301	137	0.9933554817275747	+	GGUGUCUGAAUCUGACUGAGA	58	81	64	78	30	37	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1262957-1263485	Cluster_5342	Pocillopora_meandrina_HIv1___Sc0000019	1262957	1263485	529	3354	823	0.003875968992248062	-	GUUUGAUGAUGACUUCUGCCAUGCU	159	1096	1162	204	189	186	517	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1280313-1280734	Cluster_5343	Pocillopora_meandrina_HIv1___Sc0000019	1280313	1280734	422	499	63	0.9679358717434869	+	UGGAAUAAUAAUAGUGGUACU	192	34	0	286	158	19	2	21	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1446512-1447028	Cluster_5344	Pocillopora_meandrina_HIv1___Sc0000019	1446512	1447028	517	16043	565	0.9546219534999688	+	CGAUCCAACAAGAACAAUAUGUGCUGACC	3744	65	15587	27	107	59	198	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1824339-1824957	Cluster_5345	Pocillopora_meandrina_HIv1___Sc0000019	1824339	1824957	619	595	235	0.32605042016806723	.	UGGGAAUGCACGAUAUCUGAAGAAACUUC	80	1	524	4	4	12	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1884122-1884540	Cluster_5346	Pocillopora_meandrina_HIv1___Sc0000019	1884122	1884540	419	2836	109	0.9989421720733427	+	CGCUACUUUGACCUCAUU	814	2830	1	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1960329-1960763	Cluster_5347	Pocillopora_meandrina_HIv1___Sc0000019	1960329	1960763	435	1250	272	0.0008	-	GAAUAAUUUUGUUGAGGUGCAUUAUCUGACU	134	148	958	44	30	28	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1960846-1961285	Cluster_5348	Pocillopora_meandrina_HIv1___Sc0000019	1960846	1961285	440	1184	259	0.0016891891891891893	-	UUUUGAUGUUGAGAUGCAGUUAUCUGACU	128	67	1024	29	22	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1990219-1990640	Cluster_5349	Pocillopora_meandrina_HIv1___Sc0000019	1990219	1990640	422	1436	59	1.0	+	UCUGACGAAGGGCUGACACUCA	888	27	2	405	964	24	14	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:1996129-1996560	Cluster_5350	Pocillopora_meandrina_HIv1___Sc0000019	1996129	1996560	432	235	105	0.23829787234042554	.	UUGCCAGAAGUGUGAAACUACUUGAACCG	18	9	215	4	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2008390-2008806	Cluster_5351	Pocillopora_meandrina_HIv1___Sc0000019	2008390	2008806	417	246	36	0.9959349593495935	+	AAAGAAGUACAAGUGAU	140	202	17	0	22	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2023002-2023431	Cluster_5352	Pocillopora_meandrina_HIv1___Sc0000019	2023002	2023431	430	333	61	0.975975975975976	+	GGCAGUGGUUUUUUGGAUUCUGAUCAGUGU	106	5	318	4	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2026998-2027430	Cluster_5353	Pocillopora_meandrina_HIv1___Sc0000019	2026998	2027430	433	324	118	0.3333333333333333	.	AAGUGUGAAACUACUUGAACCGGUUCG	26	9	303	0	1	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2048332-2048767	Cluster_5354	Pocillopora_meandrina_HIv1___Sc0000019	2048332	2048767	436	727	153	0.9105914718019257	+	GGCAGUGGUUUUUUGGAUUCUGAUCAGUGU	119	22	689	7	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2052530-2052965	Cluster_5355	Pocillopora_meandrina_HIv1___Sc0000019	2052530	2052965	436	369	160	0.34146341463414637	.	AUCUACUACAGAUCGCUUGAUGGAUUGCA	31	23	332	3	0	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2099238-2099680	Cluster_5356	Pocillopora_meandrina_HIv1___Sc0000019	2099238	2099680	443	534	126	0.2602996254681648	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	203	2	514	4	1	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2393898-2394310	Cluster_5357	Pocillopora_meandrina_HIv1___Sc0000019	2393898	2394310	413	76	6	0.0	-	GUGUGUCUCUCUGUCC	33	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2423518-2424063	Cluster_5358	Pocillopora_meandrina_HIv1___Sc0000019	2423518	2424063	546	3537	397	0.034209782301385355	-	UCGAUUCGUAAACUGUGCCAAUGGUUGUC	551	41	3437	4	11	12	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2426209-2426803	Cluster_5359	Pocillopora_meandrina_HIv1___Sc0000019	2426209	2426803	595	580	207	0.16896551724137931	-	UGUAAUAAAGUAUCUGUAACACCUGAUGGGC	71	5	555	1	1	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2463849-2464507	Cluster_5360	Pocillopora_meandrina_HIv1___Sc0000019	2463849	2464507	659	24931	723	0.0	-	UUUCCAUAUUUGAACGCUGACGACAGUACGU	4967	12	24648	1	4	121	145	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2480011-2480551	Cluster_5361	Pocillopora_meandrina_HIv1___Sc0000019	2480011	2480551	541	556	152	0.1906474820143885	-	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	174	0	540	4	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2566821-2567246	Cluster_5362	Pocillopora_meandrina_HIv1___Sc0000019	2566821	2567246	426	220	117	0.0	-	GAUGGAUGACCUUGAAUGAUGGGAGCA	19	45	110	11	9	30	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2716498-2716927	Cluster_5363	Pocillopora_meandrina_HIv1___Sc0000019	2716498	2716927	430	107	33	0.9532710280373832	+	GUGAGUCUGAUACAUCUUGCCGCACAUGGA	66	0	102	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2737294-2737718	Cluster_5364	Pocillopora_meandrina_HIv1___Sc0000019	2737294	2737718	425	266	32	0.0	-	AGGGACUGAAACAUCGACUGAAGACA	59	3	85	42	1	31	104	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2823636-2824052	Cluster_5365	Pocillopora_meandrina_HIv1___Sc0000019	2823636	2824052	417	135	7	1.0	+	UAGAAUGUUUACUCGUG	127	135	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2861479-2861904	Cluster_5366	Pocillopora_meandrina_HIv1___Sc0000019	2861479	2861904	426	183	78	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	25	3	175	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:2977964-2978402	Cluster_5367	Pocillopora_meandrina_HIv1___Sc0000019	2977964	2978402	439	452	173	0.0	-	UCCUAAAUCGAUCUUAUCUGUCUGUAAUU	37	3	416	5	2	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3051036-3051453	Cluster_5368	Pocillopora_meandrina_HIv1___Sc0000019	3051036	3051453	418	124	23	0.04838709677419355	-	CACUCCCUAGACCUCAUU	77	123	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3406670-3407099	Cluster_5369	Pocillopora_meandrina_HIv1___Sc0000019	3406670	3407099	430	864	144	0.9942129629629629	+	AAAAGAACGAAGAAGCUGCCAAGA	236	18	332	103	7	68	336	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3506639-3507081	Cluster_5370	Pocillopora_meandrina_HIv1___Sc0000019	3506639	3507081	443	267	99	0.6217228464419475	.	UGUGACACUUUGAGACACUCGUGAGACA	35	0	252	5	0	8	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3563986-3564415	Cluster_5371	Pocillopora_meandrina_HIv1___Sc0000019	3563986	3564415	430	154	29	0.0	-	UGUACUGUGAACAUAGUGUUACCAACCAUU	84	0	154	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3566354-3567050	Cluster_5372	Pocillopora_meandrina_HIv1___Sc0000019	3566354	3567050	697	1837	320	0.027762656505171474	-	UUGGACGCGUUGCUUGUCUGAACAAGGC	220	3	1685	100	7	10	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3567084-3567520	Cluster_5373	Pocillopora_meandrina_HIv1___Sc0000019	3567084	3567520	437	317	123	0.022082018927444796	-	UGAUCAUGCCGUCUGAUGCUAUGCCUUU	57	1	310	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3593610-3594039	Cluster_5374	Pocillopora_meandrina_HIv1___Sc0000019	3593610	3594039	430	417	100	0.0	-	UUAGACAAGGAGAAUUCCAGCAGAUGGAUU	59	38	282	88	1	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3721232-3721657	Cluster_5375	Pocillopora_meandrina_HIv1___Sc0000019	3721232	3721657	426	118	25	0.0	-	UCUUUCUGUGUUCAGUAGUGAUCUGCAUC	34	1	117	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3735302-3735776	Cluster_5376	Pocillopora_meandrina_HIv1___Sc0000019	3735302	3735776	475	270	104	0.018518518518518517	-	UGAAUCUUGAUGUGAGUGCUGUCAACACA	37	3	257	2	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3736324-3736752	Cluster_5377	Pocillopora_meandrina_HIv1___Sc0000019	3736324	3736752	429	1041	136	0.01729106628242075	-	UGUUGAACUCUUGCUGCUUGUCAGUGAC	524	6	996	0	28	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3740698-3741142	Cluster_5378	Pocillopora_meandrina_HIv1___Sc0000019	3740698	3741142	445	937	280	0.1824973319103522	-	UGAUAUGACCUUCGGCAAAAAACUGGA	102	5	830	5	4	25	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3741223-3741663	Cluster_5379	Pocillopora_meandrina_HIv1___Sc0000019	3741223	3741663	441	634	214	0.1056782334384858	-	UGUAACUGGUUCACUGCGAUUUUGUAGU	89	8	605	3	0	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3741680-3742486	Cluster_5380	Pocillopora_meandrina_HIv1___Sc0000019	3741680	3742486	807	486	251	0.34156378600823045	.	AGAGAGAAUAACUGACAAUGAUGU	35	10	363	5	7	26	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3744261-3745833	Cluster_5381	Pocillopora_meandrina_HIv1___Sc0000019	3744261	3745833	1573	3567	987	0.7639472946453603	.	UUGGUUCGGUUGUUGUCACUUUUGAAGU	260	79	3210	22	35	59	162	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3746117-3746545	Cluster_5382	Pocillopora_meandrina_HIv1___Sc0000019	3746117	3746545	429	225	128	0.18222222222222223	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	34	2	202	1	4	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3747775-3748476	Cluster_5383	Pocillopora_meandrina_HIv1___Sc0000019	3747775	3748476	702	282	142	0.10283687943262411	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	29	5	265	0	3	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3750255-3750997	Cluster_5384	Pocillopora_meandrina_HIv1___Sc0000019	3750255	3750997	743	572	231	0.9038461538461539	+	UCGCUGUAUUAAUGAACGCUUUUUCGGGA	60	10	528	2	4	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3756008-3758566	Cluster_5385	Pocillopora_meandrina_HIv1___Sc0000019	3756008	3758566	2559	4452	1333	0.04919137466307277	-	CUCCAUCUUGUCUGUUGAGUUCAACACC	171	54	4195	16	12	76	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3764466-3764886	Cluster_5386	Pocillopora_meandrina_HIv1___Sc0000019	3764466	3764886	421	130	72	0.007692307692307693	-	UGUAAGACUGACGAAGGCUGAGGUGAACAGC	22	4	120	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3765660-3766695	Cluster_5387	Pocillopora_meandrina_HIv1___Sc0000019	3765660	3766695	1036	2374	697	0.07329401853411963	-	UCCAAGUUCUUCAUUUAAAAUUUCUGCA	124	40	2170	34	11	43	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3766787-3767719	Cluster_5388	Pocillopora_meandrina_HIv1___Sc0000019	3766787	3767719	933	1341	440	0.15137956748695003	-	UGUGUGUUGAUGACAUCUUUGGGUAAAA	105	25	1148	7	14	57	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3769159-3769591	Cluster_5389	Pocillopora_meandrina_HIv1___Sc0000019	3769159	3769591	433	273	112	0.19047619047619047	-	UGUGAUUUCAACUGUGAGUGUCAGAA	17	7	223	2	9	10	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3769609-3770163	Cluster_5390	Pocillopora_meandrina_HIv1___Sc0000019	3769609	3770163	555	1169	276	0.02480752780153978	-	UGCUUGACUUAUAGUCACUGUACAACUGACU	127	13	1147	0	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3773356-3773782	Cluster_5391	Pocillopora_meandrina_HIv1___Sc0000019	3773356	3773782	427	217	99	0.0	-	UCGGAAACUCUGUCGCUCUCUUAUAUUCU	17	7	203	0	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3774114-3774760	Cluster_5392	Pocillopora_meandrina_HIv1___Sc0000019	3774114	3774760	647	2441	413	0.010651372388365424	-	UCCAACUGUCAUGAACUUGUUACAAUUUAC	242	27	2347	5	13	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3775176-3775611	Cluster_5393	Pocillopora_meandrina_HIv1___Sc0000019	3775176	3775611	436	997	118	0.0010030090270812437	-	UAAUAUCAUCUUACAAAUGUUUAGGACAGG	278	7	984	1	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3776588-3777012	Cluster_5394	Pocillopora_meandrina_HIv1___Sc0000019	3776588	3777012	425	158	69	0.006329113924050633	-	UGUUCUCUGCGAUGUGAUAGAAUCCACGUGC	27	9	143	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3777318-3777835	Cluster_5395	Pocillopora_meandrina_HIv1___Sc0000019	3777318	3777835	518	411	160	0.019464720194647202	-	UCUUAUCUGCAAGAUGCUUCUGGAAACGC	30	9	391	0	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3779713-3781221	Cluster_5396	Pocillopora_meandrina_HIv1___Sc0000019	3779713	3781221	1509	30505	3247	0.04897557777413539	-	UGUGAAACCCCGGUCUGCCAUAACCAUGUC	3790	404	28936	100	194	272	599	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3782569-3783025	Cluster_5397	Pocillopora_meandrina_HIv1___Sc0000019	3782569	3783025	457	280	142	0.0	-	UAAGAACGAGACGUCCAGAAGAAGACUUUU	33	8	264	1	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3783437-3784268	Cluster_5398	Pocillopora_meandrina_HIv1___Sc0000019	3783437	3784268	832	667	214	0.010494752623688156	-	UUCGCGCGAAGAUCUAAAAAAAACAUUUGU	152	9	646	5	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3787982-3788407	Cluster_5399	Pocillopora_meandrina_HIv1___Sc0000019	3787982	3788407	426	184	67	0.021739130434782608	-	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	29	1	171	0	1	10	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3792172-3792891	Cluster_5400	Pocillopora_meandrina_HIv1___Sc0000019	3792172	3792891	720	103268	1482	0.00015493666963628617	-	UAGGAAUUGCCCUGGACUGCAGUAGAGGC	23572	240	102256	85	35	442	210	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3793197-3793857	Cluster_5401	Pocillopora_meandrina_HIv1___Sc0000019	3793197	3793857	661	7293	521	0.16138763197586728	-	UUGAUUUUGAUGGGAUGCUGCUGCCCUGUA	788	219	6331	40	111	317	275	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3796495-3797437	Cluster_5402	Pocillopora_meandrina_HIv1___Sc0000019	3796495	3797437	943	6492	797	0.034195933456561925	-	UGCUUCAGAUUACUCGACAUGCUAGACA	433	220	5961	62	42	54	153	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3797743-3799350	Cluster_5403	Pocillopora_meandrina_HIv1___Sc0000019	3797743	3799350	1608	8089	1208	0.020892570157003337	-	UAUGAUCUUACAAGAACUGAACUGUGUA	822	24	7916	11	23	38	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3802608-3803032	Cluster_5404	Pocillopora_meandrina_HIv1___Sc0000019	3802608	3803032	425	141	55	0.0070921985815602835	-	UGAUGUUAUACUGUGAAAUCUCGUACCCA	16	2	135	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3804226-3805530	Cluster_5405	Pocillopora_meandrina_HIv1___Sc0000019	3804226	3805530	1305	12198	1389	0.06943761272339728	-	UAUAAUCUGACCACGUCUCUGACUGGGC	1569	307	11081	78	67	274	391	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3809982-3810411	Cluster_5406	Pocillopora_meandrina_HIv1___Sc0000019	3809982	3810411	430	391	81	0.020460358056265986	-	UGAGGAACUUGAAUGGAUAACUCCGGAU	96	2	347	1	3	1	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3814287-3815766	Cluster_5407	Pocillopora_meandrina_HIv1___Sc0000019	3814287	3815766	1480	14554	2015	0.06554898996839358	-	UCCAUCUAUUGAAACAGCAACUUUGCACACU	1383	128	13311	58	190	232	635	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3816735-3817153	Cluster_5408	Pocillopora_meandrina_HIv1___Sc0000019	3816735	3817153	419	213	90	0.018779342723004695	-	AAAGAAGUACAAGUGGUAGAU	32	62	97	50	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3822005-3823273	Cluster_5409	Pocillopora_meandrina_HIv1___Sc0000019	3822005	3823273	1269	7671	1241	0.026463303350280278	-	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1523	66	7361	15	59	86	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3823324-3824688	Cluster_5410	Pocillopora_meandrina_HIv1___Sc0000019	3823324	3824688	1365	2645	965	0.0026465028355387526	-	UAUCUAUGGAAGUCUGGGCGUCAGAACAU	141	25	2552	6	14	27	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3825490-3825910	Cluster_5411	Pocillopora_meandrina_HIv1___Sc0000019	3825490	3825910	421	468	196	0.26495726495726496	.	UGAUAACUAUGGACACUGGCC	59	41	291	120	11	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3825919-3826345	Cluster_5412	Pocillopora_meandrina_HIv1___Sc0000019	3825919	3826345	427	164	62	0.6829268292682927	.	CACCAAGCUCUUGAUCUCCGUACAACA	31	2	148	3	0	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3828011-3828678	Cluster_5413	Pocillopora_meandrina_HIv1___Sc0000019	3828011	3828678	668	1850	355	0.002162162162162162	-	UACGGUGAAUUCGUCGACUACAACAUGGA	373	38	1781	10	7	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3829320-3830050	Cluster_5414	Pocillopora_meandrina_HIv1___Sc0000019	3829320	3830050	731	645	284	0.0031007751937984496	-	UGGUAGAAAUCCGUCUGAUACAAUCUUC	56	23	602	2	2	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3830252-3832893	Cluster_5415	Pocillopora_meandrina_HIv1___Sc0000019	3830252	3832893	2642	11374	2250	0.00931950061543872	-	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1236	77	11072	18	28	58	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3833269-3835567	Cluster_5416	Pocillopora_meandrina_HIv1___Sc0000019	3833269	3835567	2299	3727	1201	0.0029514354708881137	-	UCGCUUGCCUUACUUUUAAGCCAUACUGU	180	143	3491	12	26	18	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3835593-3836222	Cluster_5417	Pocillopora_meandrina_HIv1___Sc0000019	3835593	3836222	630	1033	357	0.0	-	UCGGUCAGAAAUGUUGAAAUACACUUUGA	55	8	996	3	3	3	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3836384-3836793	Cluster_5418	Pocillopora_meandrina_HIv1___Sc0000019	3836384	3836793	410	154	87	0.0	-	UGGUAGACAAACUCAUUGACUGCGCUCUGC	22	7	136	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3836844-3838486	Cluster_5419	Pocillopora_meandrina_HIv1___Sc0000019	3836844	3838486	1643	6718	1252	0.0028282226853230128	-	UUGCAUCACUUUUAAACAAUGCUGUGGGU	521	150	6477	16	20	36	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3839036-3839953	Cluster_5420	Pocillopora_meandrina_HIv1___Sc0000019	3839036	3839953	918	2901	726	0.001034126163391934	-	UGGAAAUGAUCCCGAUUGAACCUUACGUC	196	25	2813	13	7	25	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3840104-3841485	Cluster_5421	Pocillopora_meandrina_HIv1___Sc0000019	3840104	3841485	1382	46521	2672	0.0026654629092237913	-	UAGGAUCGAAAGUAACCAAUCAUUGAAUA	4480	630	45108	202	100	149	332	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3841533-3842366	Cluster_5422	Pocillopora_meandrina_HIv1___Sc0000019	3841533	3842366	834	33186	2167	0.0030735852467908154	-	UUCGAUAUUUUGCUAGAAGUGUGAAAA	4874	470	31758	175	120	128	535	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3842842-3844850	Cluster_5423	Pocillopora_meandrina_HIv1___Sc0000019	3842842	3844850	2009	19281	1805	0.0015559358954411078	-	UUUAGGAUCGAAAGUAACCAAUCAUCGAGU	5594	812	17467	242	122	445	193	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3845352-3845877	Cluster_5424	Pocillopora_meandrina_HIv1___Sc0000019	3845352	3845877	526	1593	279	0.007532956685499058	-	UGAUUUAUGAUUGGCUGUUAGGCUGGCUC	198	52	1451	16	37	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3846212-3847404	Cluster_5425	Pocillopora_meandrina_HIv1___Sc0000019	3846212	3847404	1193	19304	1771	0.0015022793203481144	-	UAGGAUCGAAAGUAACCAAUCAUUGAAUA	2770	336	18428	112	60	83	285	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3848216-3848646	Cluster_5426	Pocillopora_meandrina_HIv1___Sc0000019	3848216	3848646	431	486	171	0.00205761316872428	-	UACAAAGCUCUCACGAAUUCACAAACAGA	51	2	482	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3849104-3849970	Cluster_5427	Pocillopora_meandrina_HIv1___Sc0000019	3849104	3849970	867	1174	439	0.009369676320272573	-	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	76	8	1142	1	6	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3850360-3851232	Cluster_5428	Pocillopora_meandrina_HIv1___Sc0000019	3850360	3851232	873	918	398	0.018518518518518517	-	UGCUGAAACGAUUUUGACAGGUUGUCA	54	19	865	4	2	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3851645-3852097	Cluster_5429	Pocillopora_meandrina_HIv1___Sc0000019	3851645	3852097	453	870	313	0.011494252873563218	-	UGUUCUUCUUGACUCUGACGAUCUUCAAC	93	7	848	1	1	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3852504-3853375	Cluster_5430	Pocillopora_meandrina_HIv1___Sc0000019	3852504	3853375	872	6661	688	0.0007506380423359856	-	UUUAGGAUCGAAAGUAACCAAUCAUUGAAUA	980	39	6526	9	18	19	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3920176-3920892	Cluster_5431	Pocillopora_meandrina_HIv1___Sc0000019	3920176	3920892	717	395	201	0.0810126582278481	-	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	27	6	361	1	7	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3923035-3923564	Cluster_5432	Pocillopora_meandrina_HIv1___Sc0000019	3923035	3923564	530	627	252	0.007974481658692184	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	30	3	614	4	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3923685-3924114	Cluster_5433	Pocillopora_meandrina_HIv1___Sc0000019	3923685	3924114	430	662	158	0.012084592145015106	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	148	6	650	3	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3930877-3932086	Cluster_5434	Pocillopora_meandrina_HIv1___Sc0000019	3930877	3932086	1210	3894	880	0.9527478171545968	+	UGUGACGGUUGACAUCAUGAUGGCGUA	235	63	3671	10	20	43	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3932170-3932597	Cluster_5435	Pocillopora_meandrina_HIv1___Sc0000019	3932170	3932597	428	143	44	0.9300699300699301	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	63	1	135	1	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3933467-3934738	Cluster_5436	Pocillopora_meandrina_HIv1___Sc0000019	3933467	3934738	1272	1214	491	0.9225700164744646	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	84	19	1144	3	3	14	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3969781-3970333	Cluster_5437	Pocillopora_meandrina_HIv1___Sc0000019	3969781	3970333	553	237	77	0.9240506329113924	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	39	2	207	2	2	17	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:3970686-3971284	Cluster_5438	Pocillopora_meandrina_HIv1___Sc0000019	3970686	3971284	599	1520	287	0.8065789473684211	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	503	10	1431	4	8	24	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4255204-4255620	Cluster_5439	Pocillopora_meandrina_HIv1___Sc0000019	4255204	4255620	417	872	25	0.9954128440366973	+	CCCCGUGUUGUAGGCA	404	872	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4411192-4411606	Cluster_5440	Pocillopora_meandrina_HIv1___Sc0000019	4411192	4411606	415	239	16	0.008368200836820083	-	CUUUCCGAGGUCGGG	118	238	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4422719-4423146	Cluster_5441	Pocillopora_meandrina_HIv1___Sc0000019	4422719	4423146	428	86	7	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	60	0	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4618105-4618521	Cluster_5442	Pocillopora_meandrina_HIv1___Sc0000019	4618105	4618521	417	122	11	0.0	-	CAGCUGUGACCCUCGCA	90	122	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4626626-4627050	Cluster_5443	Pocillopora_meandrina_HIv1___Sc0000019	4626626	4627050	425	133	16	0.9924812030075187	+	UGGUCUGAAGAAAAAAAAAAAAAAA	35	2	83	1	6	12	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4697499-4697931	Cluster_5444	Pocillopora_meandrina_HIv1___Sc0000019	4697499	4697931	433	438	96	0.0273972602739726	-	UCGAUUCCGCGAUGACUACAAUACGUUCUGU	114	1	435	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4747098-4747592	Cluster_5445	Pocillopora_meandrina_HIv1___Sc0000019	4747098	4747592	495	1177	283	0.42990654205607476	.	AUCGAUCGUAAAUGAACAGGGUGUUGUUU	252	85	760	19	37	115	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:4988939-4989352	Cluster_5446	Pocillopora_meandrina_HIv1___Sc0000019	4988939	4989352	414	124	67	0.6935483870967742	.	AACACUACUACCGUGAGACUGAAG	20	4	71	4	1	8	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5004635-5005059	Cluster_5447	Pocillopora_meandrina_HIv1___Sc0000019	5004635	5005059	425	186	94	0.03225806451612903	-	UACGUACUCUCUGAUAUCUGAAUGAAAGAU	13	4	175	0	3	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5181281-5181698	Cluster_5448	Pocillopora_meandrina_HIv1___Sc0000019	5181281	5181698	418	86	3	0.9883720930232558	+	UUGAACUCGACCCUGUCG	83	85	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5259204-5259623	Cluster_5449	Pocillopora_meandrina_HIv1___Sc0000019	5259204	5259623	420	248	170	0.9838709677419355	+	GACGGAAUUGCUAGUGUUAAACACGAAAU	13	59	121	14	25	20	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5416500-5416927	Cluster_5450	Pocillopora_meandrina_HIv1___Sc0000019	5416500	5416927	428	168	72	0.017857142857142856	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	22	1	159	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5428082-5428745	Cluster_5451	Pocillopora_meandrina_HIv1___Sc0000019	5428082	5428745	664	475	210	0.21052631578947367	.	UGCACUUGAAUCUUCCAAAAUAAUUGUUGA	30	10	432	5	8	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5430084-5430794	Cluster_5452	Pocillopora_meandrina_HIv1___Sc0000019	5430084	5430794	711	924	194	0.35714285714285715	.	UUCUACCCAUCAACUGUGCGAUUUCAAGA	108	25	873	6	6	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5434354-5434782	Cluster_5453	Pocillopora_meandrina_HIv1___Sc0000019	5434354	5434782	429	118	33	0.025423728813559324	-	UCCGUGAUUCAGAUUAAAAAUUCAGAUGAAU	21	0	112	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5435342-5435770	Cluster_5454	Pocillopora_meandrina_HIv1___Sc0000019	5435342	5435770	429	143	56	0.006993006993006993	-	UGUUCAAUACGUGGGCUGUCUUAUUCAAGC	39	2	138	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5437593-5437995	Cluster_5455	Pocillopora_meandrina_HIv1___Sc0000019	5437593	5437995	403	83	34	0.024096385542168676	-	UCCACGUGUAAAUGAUCGAGUCUGUAUCAC	29	4	79	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5443093-5443583	Cluster_5456	Pocillopora_meandrina_HIv1___Sc0000019	5443093	5443583	491	301	106	0.0033222591362126247	-	UAGGGAUAAUCGGUCUUCUAAUGUACUGGA	37	69	228	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5444458-5444886	Cluster_5457	Pocillopora_meandrina_HIv1___Sc0000019	5444458	5444886	429	304	50	0.0	-	UAUAGAACUCUUUAGGUUGUGAGAUGGAG	105	7	213	80	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5446708-5447270	Cluster_5458	Pocillopora_meandrina_HIv1___Sc0000019	5446708	5447270	563	791	230	0.0012642225031605564	-	UCUUGCUUUGGCUGAGACGAGAGACUGUGU	58	5	771	3	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5447713-5448138	Cluster_5459	Pocillopora_meandrina_HIv1___Sc0000019	5447713	5448138	426	154	78	0.0	-	UGAGUAGAUCACUCUGGGACGUCCUCGCC	19	7	138	4	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5448830-5449258	Cluster_5460	Pocillopora_meandrina_HIv1___Sc0000019	5448830	5449258	429	299	76	0.0	-	UGUAAAGAGCUACUCUGGAAACUUGAAGC	76	1	297	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5458238-5458661	Cluster_5461	Pocillopora_meandrina_HIv1___Sc0000019	5458238	5458661	424	123	61	0.016260162601626018	-	UGAUCUGAUCUUGGCGACAUUAUCCUC	21	6	114	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5460529-5460955	Cluster_5462	Pocillopora_meandrina_HIv1___Sc0000019	5460529	5460955	427	108	34	0.009259259259259259	-	UCCGACUGGGUCUCUCUGUAUUUGAGAAGC	19	2	103	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5467821-5468262	Cluster_5463	Pocillopora_meandrina_HIv1___Sc0000019	5467821	5468262	442	266	65	0.3609022556390977	.	AUCCCUUUUAGUAACCUUAUUGAA	78	19	130	6	5	16	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5468366-5469115	Cluster_5464	Pocillopora_meandrina_HIv1___Sc0000019	5468366	5469115	750	2625	471	0.019428571428571427	-	UCGUUUCUCAUCUACCUUGUGUUCUUG	184	37	2497	2	33	24	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5474494-5474917	Cluster_5465	Pocillopora_meandrina_HIv1___Sc0000019	5474494	5474917	424	118	48	0.0	-	UGAGUGUAUUCUUGAACUGUUUUCCAAC	44	1	115	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5477906-5478336	Cluster_5466	Pocillopora_meandrina_HIv1___Sc0000019	5477906	5478336	431	191	67	0.0	-	UUCAAUGUGAAAUAGUUUAUUGAGGAAUGGU	51	0	189	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5478779-5479182	Cluster_5467	Pocillopora_meandrina_HIv1___Sc0000019	5478779	5479182	404	216	99	0.004629629629629629	-	UGUUUACAGAGGUUUGGGUUGAUGAUCUU	17	3	206	3	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5482081-5482491	Cluster_5468	Pocillopora_meandrina_HIv1___Sc0000019	5482081	5482491	411	207	114	0.033816425120772944	-	UGACAUGACUGUACCGUACAGAACACCA	9	14	187	0	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5482975-5483420	Cluster_5469	Pocillopora_meandrina_HIv1___Sc0000019	5482975	5483420	446	850	171	0.012941176470588235	-	UAACUCUGAUUGCUUAAUCCCUCACUGAGG	155	11	819	2	7	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5483634-5485029	Cluster_5470	Pocillopora_meandrina_HIv1___Sc0000019	5483634	5485029	1396	4561	1287	0.15391361543521156	-	AUCCCACUUCUGACACCA	171	454	3745	27	67	126	142	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5485609-5486184	Cluster_5471	Pocillopora_meandrina_HIv1___Sc0000019	5485609	5486184	576	427	182	0.03747072599531616	-	UAUCACACUUGUGCUGCCAUGCUGGACA	50	6	400	1	1	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5486851-5489302	Cluster_5472	Pocillopora_meandrina_HIv1___Sc0000019	5486851	5489302	2452	11907	3015	0.03854875283446712	-	UGAGGACUUUUCAAAUUUAGCUACAGAUU	458	161	10966	51	83	159	487	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5489974-5490852	Cluster_5473	Pocillopora_meandrina_HIv1___Sc0000019	5489974	5490852	879	879	435	0.2036405005688282	.	AGGUCUAUUAUUAGAAGGGAAUUUUUUGU	94	20	751	13	21	21	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5490888-5491827	Cluster_5474	Pocillopora_meandrina_HIv1___Sc0000019	5490888	5491827	940	751	302	0.09320905459387484	-	UAUUCCAAUCUCCUCUGAAACUCUUCCGGA	74	8	683	2	2	26	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5492614-5493023	Cluster_5475	Pocillopora_meandrina_HIv1___Sc0000019	5492614	5493023	410	165	105	0.15151515151515152	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	17	0	149	0	1	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5493357-5493791	Cluster_5476	Pocillopora_meandrina_HIv1___Sc0000019	5493357	5493791	435	436	180	0.02981651376146789	-	UCUGUUCUGACUUGAUAGGACCUUAUGUC	47	7	415	4	1	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5494121-5494552	Cluster_5477	Pocillopora_meandrina_HIv1___Sc0000019	5494121	5494552	432	858	264	0.43356643356643354	.	ACCCAGUUGAAGAACGAGAGACGU	121	9	532	1	9	79	228	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5495048-5495685	Cluster_5478	Pocillopora_meandrina_HIv1___Sc0000019	5495048	5495685	638	2295	460	0.025272331154684097	-	UGUUCCUUGAAUUCUGCGUGCACAAAGC	318	31	2171	12	15	21	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5495833-5498398	Cluster_5479	Pocillopora_meandrina_HIv1___Sc0000019	5495833	5498398	2566	6191	1872	0.0741398804716524	-	UGUUUGCAGUUAUGAAUGAAUCUCUUUAGC	489	131	5708	50	40	91	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5498925-5499650	Cluster_5480	Pocillopora_meandrina_HIv1___Sc0000019	5498925	5499650	726	2367	378	0.01689902830587241	-	UGACAAAUUUUCAUGGCUCCUUUCACAGA	467	76	2184	14	19	21	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5500882-5501311	Cluster_5481	Pocillopora_meandrina_HIv1___Sc0000019	5500882	5501311	430	277	83	0.039711191335740074	-	UGGUCUUGAAAUAUGGUGACACCCAAUCUG	66	14	252	4	2	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5511087-5512628	Cluster_5482	Pocillopora_meandrina_HIv1___Sc0000019	5511087	5512628	1542	1537	329	0.11841249186727391	-	UCAGUGUUUUGUAGUCCAAUGAAACUAAGC	307	34	1434	16	11	13	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5515544-5516386	Cluster_5483	Pocillopora_meandrina_HIv1___Sc0000019	5515544	5516386	843	4583	554	0.007636919048658084	-	UGAACUGUUGAACCACAAGUGAAGAUAC	411	169	4226	26	115	30	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5518101-5518533	Cluster_5484	Pocillopora_meandrina_HIv1___Sc0000019	5518101	5518533	433	299	119	0.020066889632107024	-	UCACAUGUAAACACCUUGCCAUUAUCGAUC	62	11	276	1	6	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5519625-5520293	Cluster_5485	Pocillopora_meandrina_HIv1___Sc0000019	5519625	5520293	669	759	171	0.026350461133069828	-	UCGACGUCGAUAUCAACAUUCUUAAUGU	231	9	729	3	1	6	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5528722-5529214	Cluster_5486	Pocillopora_meandrina_HIv1___Sc0000019	5528722	5529214	493	217	78	0.004608294930875576	-	UGGGCGAUUUGCAAUUCAUGGAAAAAUGU	43	8	206	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5530161-5530594	Cluster_5487	Pocillopora_meandrina_HIv1___Sc0000019	5530161	5530594	434	225	74	0.3288888888888889	.	AAGCUCUUUAAGAUCAUUGAACA	39	4	160	0	6	44	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5531747-5532717	Cluster_5488	Pocillopora_meandrina_HIv1___Sc0000019	5531747	5532717	971	849	186	0.002355712603062426	-	UGAGCAAUGAAUUCUUCAAACACAAAACAGA	194	18	815	2	5	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5537339-5538414	Cluster_5489	Pocillopora_meandrina_HIv1___Sc0000019	5537339	5538414	1076	696	312	0.11637931034482758	-	UCGGCUUUGAUUCCUGGCAGCUUAUCAA	73	26	615	4	3	8	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5538438-5538865	Cluster_5490	Pocillopora_meandrina_HIv1___Sc0000019	5538438	5538865	428	325	126	0.08923076923076922	-	UACUUUGACAAGAACUAUAGGAUGGCAA	54	15	291	2	5	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5538984-5539389	Cluster_5491	Pocillopora_meandrina_HIv1___Sc0000019	5538984	5539389	406	161	80	0.16149068322981366	-	UCCAUUCUAUACAGCUCUUCACAAUCGUU	16	6	131	0	1	2	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5540324-5540983	Cluster_5492	Pocillopora_meandrina_HIv1___Sc0000019	5540324	5540983	660	511	132	0.08806262230919765	-	UCUUGUACGUUGCUUAGAAGAUUCAC	142	42	418	2	2	27	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5541815-5542236	Cluster_5493	Pocillopora_meandrina_HIv1___Sc0000019	5541815	5542236	422	125	54	0.0	-	UAAAACGAUAUUGCUGACAGAAAAAUAACA	26	2	121	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5543717-5544953	Cluster_5494	Pocillopora_meandrina_HIv1___Sc0000019	5543717	5544953	1237	995	318	0.02814070351758794	-	UGAACGACUCAAAAUCUCCACUGUUGAAAGG	151	10	956	4	6	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5546262-5547320	Cluster_5495	Pocillopora_meandrina_HIv1___Sc0000019	5546262	5547320	1059	1996	698	0.10671342685370741	-	UACGCUGAAAUUUCUGCUUGGGU	114	94	1552	38	31	194	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5548045-5548473	Cluster_5496	Pocillopora_meandrina_HIv1___Sc0000019	5548045	5548473	429	123	51	0.0	-	UUGGUCUUCCUGUAAUGUGCUGAUUGUGGC	19	1	121	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5549965-5550394	Cluster_5497	Pocillopora_meandrina_HIv1___Sc0000019	5549965	5550394	430	180	47	0.0	-	UGGUUUCUGAAAUUUUGAAUGUGGAAGUUC	62	5	165	2	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5554945-5555364	Cluster_5498	Pocillopora_meandrina_HIv1___Sc0000019	5554945	5555364	420	540	91	0.001851851851851852	-	AAAUCUUACACUCUUUGCCA	142	374	163	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5555767-5556170	Cluster_5499	Pocillopora_meandrina_HIv1___Sc0000019	5555767	5556170	404	188	85	0.0	-	UGAGUCCUCGUUUUAGCAGCAUGUACUGUU	24	5	176	2	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5556470-5556917	Cluster_5500	Pocillopora_meandrina_HIv1___Sc0000019	5556470	5556917	448	651	238	0.004608294930875576	-	UGUCCAGGUCUAGUUGUUCUCCUUCGAUU	67	13	621	3	4	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5558976-5559395	Cluster_5501	Pocillopora_meandrina_HIv1___Sc0000019	5558976	5559395	420	192	101	0.10416666666666667	-	UUCUAAAGCUAGAGAACUGACUCAACUUC	14	14	151	5	1	6	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5562928-5564415	Cluster_5502	Pocillopora_meandrina_HIv1___Sc0000019	5562928	5564415	1488	4025	1315	0.1013664596273292	-	UAGCGGUAUUUUCUUCAAUAGUAAGGU	147	70	3583	16	34	156	166	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5564431-5565476	Cluster_5503	Pocillopora_meandrina_HIv1___Sc0000019	5564431	5565476	1046	2508	753	0.06220095693779904	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	258	61	2333	17	24	27	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5565540-5565953	Cluster_5504	Pocillopora_meandrina_HIv1___Sc0000019	5565540	5565953	414	136	71	0.029411764705882353	-	UGAGUAAAGAUUGUUAGAAACUGUUUCA	17	1	125	2	4	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5608758-5609173	Cluster_5505	Pocillopora_meandrina_HIv1___Sc0000019	5608758	5609173	416	120	12	0.95	+	UCCGGACUGUUACAGU	56	119	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:5960842-5961269	Cluster_5506	Pocillopora_meandrina_HIv1___Sc0000019	5960842	5961269	428	153	76	0.058823529411764705	-	UCUGACUUGUAGACUUUGGUGAACUGCA	24	0	148	1	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6018847-6019274	Cluster_5507	Pocillopora_meandrina_HIv1___Sc0000019	6018847	6019274	428	184	87	0.03804347826086957	-	UCUGACUUGUAGACUUUGGUGAACUGCA	32	2	179	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6044301-6044722	Cluster_5508	Pocillopora_meandrina_HIv1___Sc0000019	6044301	6044722	422	221	133	0.8371040723981901	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	11	4	211	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6044744-6045174	Cluster_5509	Pocillopora_meandrina_HIv1___Sc0000019	6044744	6045174	431	302	139	0.956953642384106	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	20	2	296	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6067663-6068288	Cluster_5510	Pocillopora_meandrina_HIv1___Sc0000019	6067663	6068288	626	458	187	0.05021834061135371	-	UCUGACUUGUAGACUUUGGUGAACUGCA	62	1	447	3	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6195085-6195499	Cluster_5511	Pocillopora_meandrina_HIv1___Sc0000019	6195085	6195499	415	105	9	0.0	-	AAGAAGAUUCGGGCU	46	104	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6301471-6302094	Cluster_5512	Pocillopora_meandrina_HIv1___Sc0000019	6301471	6302094	624	1689	223	0.009473060982830076	-	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	456	0	1674	2	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6393114-6393565	Cluster_5513	Pocillopora_meandrina_HIv1___Sc0000019	6393114	6393565	452	240	92	0.975	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	25	2	231	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6393721-6396888	Cluster_5514	Pocillopora_meandrina_HIv1___Sc0000019	6393721	6396888	3168	5154	1784	0.9229724485836244	+	UGUACAACCAUCCGAUACUCUUGU	645	58	3793	29	26	146	1102	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6397161-6398342	Cluster_5515	Pocillopora_meandrina_HIv1___Sc0000019	6397161	6398342	1182	1641	698	0.7995124923826935	.	CUUUCCGAGGUCGCGA	93	177	1364	5	15	32	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6398638-6399065	Cluster_5516	Pocillopora_meandrina_HIv1___Sc0000019	6398638	6399065	428	302	175	0.8112582781456954	+	UGUUGUUCCAGGUAGUAUAAGCAAUCUG	11	12	260	3	5	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6399266-6400373	Cluster_5517	Pocillopora_meandrina_HIv1___Sc0000019	6399266	6400373	1108	8135	1168	0.8796558082360172	+	UACAAUAACCUCUGAUUUCACUAAAUG	1106	58	7410	43	73	198	353	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6411186-6411617	Cluster_5518	Pocillopora_meandrina_HIv1___Sc0000019	6411186	6411617	432	542	139	0.033210332103321034	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	144	6	528	2	4	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6423926-6424355	Cluster_5519	Pocillopora_meandrina_HIv1___Sc0000019	6423926	6424355	430	95	26	0.010526315789473684	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	35	2	91	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6434231-6434651	Cluster_5520	Pocillopora_meandrina_HIv1___Sc0000019	6434231	6434651	421	171	100	0.9766081871345029	+	UGUAUUACUGGGCUGCCUAUCUUCAUUGGA	14	3	164	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6437833-6439058	Cluster_5521	Pocillopora_meandrina_HIv1___Sc0000019	6437833	6439058	1226	7496	1417	0.07083778014941303	-	UGUUUUGUUUCUGAUUAACCUUGUGU	592	147	6963	34	40	106	206	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6439915-6441043	Cluster_5522	Pocillopora_meandrina_HIv1___Sc0000019	6439915	6441043	1129	5179	815	0.9700714423633906	+	UGCUUGUAAUGUAAUAUCUCCUGGAGG	520	23	4885	23	26	112	110	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6441090-6441643	Cluster_5523	Pocillopora_meandrina_HIv1___Sc0000019	6441090	6441643	554	2862	395	0.9856743535988819	+	UAUAUCCUUUUAUUAAGGGUUUGGCGGUAG	773	22	2799	2	3	11	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6446818-6447245	Cluster_5524	Pocillopora_meandrina_HIv1___Sc0000019	6446818	6447245	428	171	46	0.04093567251461988	-	UCAAAUCGAUUCUGAAUGUUCUCUUUUA	48	0	168	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6457181-6458234	Cluster_5525	Pocillopora_meandrina_HIv1___Sc0000019	6457181	6458234	1054	1261	365	0.8992862807295797	+	UCAUCUCUAUUAUUGGGUCGCUUGUAGU	212	10	1213	7	6	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6462929-6463921	Cluster_5526	Pocillopora_meandrina_HIv1___Sc0000019	6462929	6463921	993	7148	971	0.9601287073307219	+	UGUUCAACUCUUUCAAUGGCAGCUGUG	647	133	6729	31	49	86	120	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6469159-6469574	Cluster_5527	Pocillopora_meandrina_HIv1___Sc0000019	6469159	6469574	416	220	7	0.9863636363636363	+	GACACUGGCUUCGGUU	207	220	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6490502-6491050	Cluster_5528	Pocillopora_meandrina_HIv1___Sc0000019	6490502	6491050	549	1785	231	0.011764705882352941	-	UGUUCAAAAUUAUCGUCUACGUAUGUGU	138	4	1693	4	18	4	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6651474-6651886	Cluster_5529	Pocillopora_meandrina_HIv1___Sc0000019	6651474	6651886	413	197	128	0.09137055837563451	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	31	4	182	2	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6653731-6654780	Cluster_5530	Pocillopora_meandrina_HIv1___Sc0000019	6653731	6654780	1050	709	337	0.7545839210155149	.	UGAUCAUAUAUUAUUCUAUCUGGAGA	26	5	655	10	5	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6655040-6655470	Cluster_5531	Pocillopora_meandrina_HIv1___Sc0000019	6655040	6655470	431	643	198	0.9222395023328149	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	91	5	555	4	4	8	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6679737-6680164	Cluster_5532	Pocillopora_meandrina_HIv1___Sc0000019	6679737	6680164	428	237	118	0.8776371308016878	+	UACUGAUAGUGAAACUGCUCCUUGAACC	24	7	218	0	1	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000019:6680180-6680610	Cluster_5533	Pocillopora_meandrina_HIv1___Sc0000019	6680180	6680610	431	322	146	0.9440993788819876	+	UGAUAACUGUACUCUUGAAAUUCAUCA	15	5	304	1	3	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:130515-130932	Cluster_5534	Pocillopora_meandrina_HIv1___Sc0000020	130515	130932	418	208	45	0.004807692307692308	-	GCUGGCUGACUUUGGUGG	29	207	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:312674-314365	Cluster_5535	Pocillopora_meandrina_HIv1___Sc0000020	312674	314365	1692	4084	1310	0.09622918707149854	-	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	378	52	3801	22	28	48	133	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:314372-314799	Cluster_5536	Pocillopora_meandrina_HIv1___Sc0000020	314372	314799	428	369	171	0.15718157181571815	-	UUUGUCGUGAUCUUUCACUGCUUCUUGC	50	5	343	1	2	12	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:314917-315343	Cluster_5537	Pocillopora_meandrina_HIv1___Sc0000020	314917	315343	427	166	77	0.0963855421686747	-	UGAACUUCUCGGCUCCAAACACUAUGG	42	0	156	0	1	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:315360-315790	Cluster_5538	Pocillopora_meandrina_HIv1___Sc0000020	315360	315790	431	483	179	0.060041407867494824	-	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	65	2	455	3	2	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:316076-317295	Cluster_5539	Pocillopora_meandrina_HIv1___Sc0000020	316076	317295	1220	1224	470	0.05473856209150327	-	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	88	15	1126	5	13	17	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:324384-324812	Cluster_5540	Pocillopora_meandrina_HIv1___Sc0000020	324384	324812	429	178	64	0.03932584269662921	-	UGUAUUCUUUUAUAACUCUUAGGUUGUGAC	30	4	170	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:336427-336854	Cluster_5541	Pocillopora_meandrina_HIv1___Sc0000020	336427	336854	428	154	81	0.012987012987012988	-	UGACGUGAAAGUUUCUGGACUUGUUUCGA	17	2	148	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:338038-338466	Cluster_5542	Pocillopora_meandrina_HIv1___Sc0000020	338038	338466	429	288	147	0.125	-	UCGGAACAACGGUCGGUCUUCAGGCU	16	14	243	0	1	9	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:347036-347464	Cluster_5543	Pocillopora_meandrina_HIv1___Sc0000020	347036	347464	429	332	166	0.28313253012048195	.	UGUGAUUUCUUUGUCUGGCGAAUUUCUCC	32	10	301	3	4	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:351542-351968	Cluster_5544	Pocillopora_meandrina_HIv1___Sc0000020	351542	351968	427	231	130	0.008658008658008658	-	UUAGAUCGUUCAUGGUUGCAUUCGUGA	27	3	226	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:361845-362341	Cluster_5545	Pocillopora_meandrina_HIv1___Sc0000020	361845	362341	497	1147	200	0.011333914559721011	-	UGAAACUGUUGCAUUUGAUUCUGUUGCUGC	306	3	1130	0	0	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:380637-381078	Cluster_5546	Pocillopora_meandrina_HIv1___Sc0000020	380637	381078	442	901	144	0.195338512763596	-	UGAACUUGAACUAUUUGCUGGAGACGA	228	7	722	51	15	11	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:382358-382785	Cluster_5547	Pocillopora_meandrina_HIv1___Sc0000020	382358	382785	428	189	72	0.0	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	34	2	177	0	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:395351-395774	Cluster_5548	Pocillopora_meandrina_HIv1___Sc0000020	395351	395774	424	152	56	0.6381578947368421	.	UUGUCUUGUCAAACAGACCCUGGAGAUA	14	3	121	0	2	1	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:775334-775783	Cluster_5549	Pocillopora_meandrina_HIv1___Sc0000020	775334	775783	450	612	257	0.06862745098039216	-	UUACCGGAGUGUUCUCUCGACGCAGUUUC	36	4	572	0	5	21	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:775949-776378	Cluster_5550	Pocillopora_meandrina_HIv1___Sc0000020	775949	776378	430	337	102	0.020771513353115726	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	50	0	335	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:857382-857811	Cluster_5551	Pocillopora_meandrina_HIv1___Sc0000020	857382	857811	430	312	51	0.003205128205128205	-	ACAAAGAACGAAUUGAGCCGACUUCAUGAU	74	5	298	3	2	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:859609-860032	Cluster_5552	Pocillopora_meandrina_HIv1___Sc0000020	859609	860032	424	91	32	0.0	-	UGGUAGAGCCAGUGAGGAAGCAGCUAAAG	18	11	71	3	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:869363-870043	Cluster_5553	Pocillopora_meandrina_HIv1___Sc0000020	869363	870043	681	1429	178	0.052484254723582924	-	UUCUGCUAUAUUGUGAAAUAACCUCAACAU	284	37	1348	5	12	14	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:929870-930286	Cluster_5554	Pocillopora_meandrina_HIv1___Sc0000020	929870	930286	417	827	35	0.0	-	UGACAACUUUUGACG	380	825	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1050285-1050710	Cluster_5555	Pocillopora_meandrina_HIv1___Sc0000020	1050285	1050710	426	107	39	0.04672897196261682	-	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	33	0	105	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1057769-1058236	Cluster_5556	Pocillopora_meandrina_HIv1___Sc0000020	1057769	1058236	468	461	190	0.18655097613882862	-	UUCCUCAUCUGAAGACUCUUCUAGAAUC	33	17	425	4	12	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1058725-1059943	Cluster_5557	Pocillopora_meandrina_HIv1___Sc0000020	1058725	1059943	1219	10544	1531	0.04059180576631259	-	UGAAUCACUGUCAUCAAAACCAUGAAC	1204	136	9970	46	92	115	185	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1061581-1062328	Cluster_5558	Pocillopora_meandrina_HIv1___Sc0000020	1061581	1062328	748	6427	712	0.2830247393807375	.	UAAGAAGAGGAAAAUUUACAUGUUUGA	692	69	5781	19	18	443	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1142046-1142566	Cluster_5559	Pocillopora_meandrina_HIv1___Sc0000020	1142046	1142566	521	371	85	0.8706199460916442	+	UGACUUGAUUUUUUACGGCAUUUUGUAUC	182	5	340	4	3	4	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1162645-1163072	Cluster_5560	Pocillopora_meandrina_HIv1___Sc0000020	1162645	1163072	428	152	38	1.0	+	UGUGCCAAAGAUUUAGAACGAAAGAACGA	44	1	148	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1409826-1410256	Cluster_5561	Pocillopora_meandrina_HIv1___Sc0000020	1409826	1410256	431	231	57	0.012987012987012988	-	UGUGUGACUUUGUAUGUAUAUUGAGCGU	38	0	228	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1425149-1425562	Cluster_5562	Pocillopora_meandrina_HIv1___Sc0000020	1425149	1425562	414	80	29	0.9875	+	UGCCAAGCGAUGGAAAGGGAGGAAGAGA	27	4	66	1	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1482548-1482962	Cluster_5563	Pocillopora_meandrina_HIv1___Sc0000020	1482548	1482962	415	157	11	0.012738853503184714	-	ACGGAGAACUCUUUU	120	154	2	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:1665286-1665721	Cluster_5564	Pocillopora_meandrina_HIv1___Sc0000020	1665286	1665721	436	633	135	0.9605055292259084	+	UGCGAUUUCGUUCCUCGUCCUUGAUGAGG	153	1	610	0	2	2	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2018665-2019080	Cluster_5565	Pocillopora_meandrina_HIv1___Sc0000020	2018665	2019080	416	127	81	0.023622047244094488	-	GGAAGAACGAAAGCGUUAGACCUGACU	12	34	71	3	5	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2071022-2071437	Cluster_5566	Pocillopora_meandrina_HIv1___Sc0000020	2071022	2071437	416	336	10	0.002976190476190476	-	GUUCUAUUUUGUUUGU	304	336	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2137330-2138632	Cluster_5567	Pocillopora_meandrina_HIv1___Sc0000020	2137330	2138632	1303	15198	2464	0.09777602316094224	-	UCGAAUGCAUAAGUUUACUGGGGCUUGACC	1958	149	14414	43	68	224	300	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2139970-2140397	Cluster_5568	Pocillopora_meandrina_HIv1___Sc0000020	2139970	2140397	428	657	111	0.9330289193302892	+	UGUAUCUAGCUCUCUCUGAACCACAGG	178	7	598	1	2	1	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2140982-2141636	Cluster_5569	Pocillopora_meandrina_HIv1___Sc0000020	2140982	2141636	655	3129	490	0.06263982102908278	-	UACGAUGUGAUGUCUGAUCUUGACCCCGAU	576	19	2933	4	18	59	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2154149-2157219	Cluster_5570	Pocillopora_meandrina_HIv1___Sc0000020	2154149	2157219	3071	6518	2241	0.016569499846578704	-	UGAGACUUAAUUUCACACUACAGGAAUUGU	211	129	6160	32	35	78	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2157971-2158803	Cluster_5571	Pocillopora_meandrina_HIv1___Sc0000020	2157971	2158803	833	951	411	0.006309148264984227	-	UGAUUAAGAUAAGUUCUCUCAUUGGGCAUU	30	43	864	11	12	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2159004-2159497	Cluster_5572	Pocillopora_meandrina_HIv1___Sc0000020	2159004	2159497	494	336	128	0.011904761904761904	-	UAAAGCUGUGUCCACUAUAUCUGAGUAUU	27	7	319	0	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2162622-2163356	Cluster_5573	Pocillopora_meandrina_HIv1___Sc0000020	2162622	2163356	735	4266	270	0.011251758087201125	-	UGUUCCGUUAAUGACAUAAACCUUAGUCCUU	801	43	4128	6	3	10	76	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2165991-2166419	Cluster_5574	Pocillopora_meandrina_HIv1___Sc0000020	2165991	2166419	429	284	104	0.0	-	UAAUCUUGUCUUCACUGAACUCUAGGCA	56	6	272	3	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2167227-2167640	Cluster_5575	Pocillopora_meandrina_HIv1___Sc0000020	2167227	2167640	414	206	100	0.009708737864077669	-	UGUAAACUUCCGCAUCAGCUGUAUUUCAAC	25	9	192	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2167723-2168861	Cluster_5576	Pocillopora_meandrina_HIv1___Sc0000020	2167723	2168861	1139	731	223	0.016415868673050615	-	UGAGAUCUUUAACAUUGCUGAGAUGAUAU	123	24	693	1	3	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2171482-2173096	Cluster_5577	Pocillopora_meandrina_HIv1___Sc0000020	2171482	2173096	1615	9832	1762	0.14574857607811229	-	UACUUGUCGAAGUCCUGGCCCUCUAGCC	666	113	8952	41	127	191	408	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2180252-2180666	Cluster_5578	Pocillopora_meandrina_HIv1___Sc0000020	2180252	2180666	415	233	132	0.012875536480686695	-	UGAAACGCAUCGUCACAUUGUAUAACUGA	14	19	212	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2183526-2183955	Cluster_5579	Pocillopora_meandrina_HIv1___Sc0000020	2183526	2183955	430	181	76	0.0055248618784530384	-	UCCGAUCAAAGAAACAUCAAAGUGCUCGC	19	1	175	4	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2184160-2185184	Cluster_5580	Pocillopora_meandrina_HIv1___Sc0000020	2184160	2185184	1025	1586	850	0.00819672131147541	-	GGGAGCCUGAGAAACGU	55	896	356	112	88	72	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2187009-2187437	Cluster_5581	Pocillopora_meandrina_HIv1___Sc0000020	2187009	2187437	429	270	107	0.014814814814814815	-	UGUUGCUCUAAAUGUAUCUUUGAUGUAUA	41	4	262	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2187594-2188625	Cluster_5582	Pocillopora_meandrina_HIv1___Sc0000020	2187594	2188625	1032	1199	283	0.007506255212677231	-	UGUUAGAAAUUCCAGAAACUGCUUGUGUGC	271	10	1169	2	2	10	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2193899-2194735	Cluster_5583	Pocillopora_meandrina_HIv1___Sc0000020	2193899	2194735	837	8746	1696	0.004687857306197119	-	CUUAGAUGUUCUGGGCCGCACGCGCGCUA	264	3691	3380	454	357	393	471	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2196742-2197517	Cluster_5584	Pocillopora_meandrina_HIv1___Sc0000020	2196742	2197517	776	591	347	0.008460236886632826	-	UAGGAUCUGAUUUCAAUCCAUUUGCUGUC	28	12	554	5	5	10	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2197561-2199013	Cluster_5585	Pocillopora_meandrina_HIv1___Sc0000020	2197561	2199013	1453	4299	1055	0.0104675505931612	-	UACAAAGUCAUGUGCCACCUCUGCAACA	450	69	4141	9	8	28	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2199973-2200508	Cluster_5586	Pocillopora_meandrina_HIv1___Sc0000020	2199973	2200508	536	512	224	0.0	-	UCUUUUAGUAUCGCCAACUGUGGCUUCGGA	38	5	493	6	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2200810-2201288	Cluster_5587	Pocillopora_meandrina_HIv1___Sc0000020	2200810	2201288	479	1027	275	0.0009737098344693282	-	UGUUGUCAUAUUGUUUCUCCAUUCAUC	129	6	977	2	3	25	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2202506-2202922	Cluster_5588	Pocillopora_meandrina_HIv1___Sc0000020	2202506	2202922	417	134	72	0.014925373134328358	-	UGCACUGUAUCGAUACCACUUAUAGGGAAA	23	3	127	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2203171-2204060	Cluster_5589	Pocillopora_meandrina_HIv1___Sc0000020	2203171	2204060	890	818	329	0.004889975550122249	-	UGAUAUUAUACAGAUCUUCUGCCUGCAUAGC	95	36	761	9	1	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2204387-2206467	Cluster_5590	Pocillopora_meandrina_HIv1___Sc0000020	2204387	2206467	2081	16107	1981	0.05153039051344136	-	UCGGUAUAGCUUUCAAAACUGUUGUCACU	2293	497	13956	75	153	776	650	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2206824-2207412	Cluster_5591	Pocillopora_meandrina_HIv1___Sc0000020	2206824	2207412	589	1398	352	0.07439198855507868	-	UAAACAACGCUCUGAUCGCCAUUAGGUU	104	9	1300	8	11	44	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2207421-2208625	Cluster_5592	Pocillopora_meandrina_HIv1___Sc0000020	2207421	2208625	1205	1440	628	0.11041666666666666	-	UCGUCCGUCAGUUUGUUCCACUUUAAAC	85	31	1313	7	22	29	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2208662-2209312	Cluster_5593	Pocillopora_meandrina_HIv1___Sc0000020	2208662	2209312	651	1286	503	0.104199066874028	-	UGCUUCUCAAUUUCGUCUGUUGUCAGGG	94	22	1174	9	7	26	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2210292-2210722	Cluster_5594	Pocillopora_meandrina_HIv1___Sc0000020	2210292	2210722	431	435	89	0.04367816091954023	-	UCUAUGCUAUUAUUCUGUUUCCGACACACU	99	4	428	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2213520-2214628	Cluster_5595	Pocillopora_meandrina_HIv1___Sc0000020	2213520	2214628	1109	1384	412	0.016618497109826588	-	UGACAAUCAUGCUGCUAAGUUCCUACGC	154	47	1310	2	7	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2215351-2215781	Cluster_5596	Pocillopora_meandrina_HIv1___Sc0000020	2215351	2215781	431	523	169	0.0019120458891013384	-	UAAUUUUGGAUGUGAGCUUCCCGAUAGCC	51	9	503	3	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2215844-2216273	Cluster_5597	Pocillopora_meandrina_HIv1___Sc0000020	2215844	2216273	430	325	139	0.0	-	UUGUGUCACUAACAAGGGACCUAGAAGAGU	47	6	316	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2218100-2218724	Cluster_5598	Pocillopora_meandrina_HIv1___Sc0000020	2218100	2218724	625	233	85	0.33047210300429186	.	UGUAUCCCAACCAAGA	41	77	155	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2219677-2220083	Cluster_5599	Pocillopora_meandrina_HIv1___Sc0000020	2219677	2220083	407	87	33	0.011494252873563218	-	UGACUUAACUGAACUUUCACCUGCAGUGGA	41	1	81	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2222506-2223158	Cluster_5600	Pocillopora_meandrina_HIv1___Sc0000020	2222506	2223158	653	3707	572	0.2684111141084435	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	746	93	3103	45	23	118	325	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2223405-2224021	Cluster_5601	Pocillopora_meandrina_HIv1___Sc0000020	2223405	2224021	617	2437	377	0.1300779647107099	-	UUACAUGAUUUUUAUAGGAGCUGAAUAA	816	29	2279	2	6	23	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2247886-2248410	Cluster_5602	Pocillopora_meandrina_HIv1___Sc0000020	2247886	2248410	525	888	209	0.44932432432432434	.	UGGGUUCUCGAUCACGUCUAAAUACACG	78	14	836	3	6	17	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2257511-2258054	Cluster_5603	Pocillopora_meandrina_HIv1___Sc0000020	2257511	2258054	544	647	161	0.0571870170015456	-	UGAAUAACCACUGAGACGUUCGGUAGA	53	29	584	8	8	2	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2259957-2262435	Cluster_5604	Pocillopora_meandrina_HIv1___Sc0000020	2259957	2262435	2479	9327	1108	0.050927415031628606	-	UGAGACGAAACCCGACUACAGAAUAGCU	1511	44	8875	18	24	51	315	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2339084-2339501	Cluster_5605	Pocillopora_meandrina_HIv1___Sc0000020	2339084	2339501	418	312	14	0.016025641025641024	-	CGGCCUGAAAAAAAAAA	191	306	3	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2446206-2446622	Cluster_5606	Pocillopora_meandrina_HIv1___Sc0000020	2446206	2446622	417	333	31	0.006006006006006006	-	GAUGGAUGGAGACCGCU	240	326	3	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2449892-2450318	Cluster_5607	Pocillopora_meandrina_HIv1___Sc0000020	2449892	2450318	427	197	92	0.005076142131979695	-	GACGGUGUAUGCCUCUGAUGGUUGUA	18	71	87	7	12	10	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2454190-2454610	Cluster_5608	Pocillopora_meandrina_HIv1___Sc0000020	2454190	2454610	421	130	29	0.0	-	UCCAGCACCAAUGUUAUUGUUA	40	17	1	50	51	11	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2455027-2455510	Cluster_5609	Pocillopora_meandrina_HIv1___Sc0000020	2455027	2455510	484	709	203	0.0	-	CUAGCCCCGUGCUCCUGUAACAUUU	167	184	359	35	65	23	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2557825-2558240	Cluster_5610	Pocillopora_meandrina_HIv1___Sc0000020	2557825	2558240	416	5152	51	1.0	+	GUUCUAUUUUGUUGGC	4607	5150	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2571080-2571525	Cluster_5611	Pocillopora_meandrina_HIv1___Sc0000020	2571080	2571525	446	2536	179	0.0015772870662460567	-	GGCCGUGAUCGUAUAGUGGUUAGUACAUU	788	428	2060	12	8	6	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2582171-2582597	Cluster_5612	Pocillopora_meandrina_HIv1___Sc0000020	2582171	2582597	427	247	165	0.05668016194331984	-	AUUGGAACGAUACAGAGAAGA	10	55	96	30	28	18	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2598848-2599327	Cluster_5613	Pocillopora_meandrina_HIv1___Sc0000020	2598848	2599327	480	2332	789	0.9729845626072041	+	AUUGGAACGAUACAGAGAAGAUUAGCA	76	654	960	227	148	170	173	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2609484-2609984	Cluster_5614	Pocillopora_meandrina_HIv1___Sc0000020	2609484	2609984	501	9202	1725	0.009128450336883287	-	GCACAUAUACUAAAAUUGGAACGAUA	232	2132	4085	734	624	947	680	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2623402-2623828	Cluster_5615	Pocillopora_meandrina_HIv1___Sc0000020	2623402	2623828	427	133	55	0.022556390977443608	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	34	0	128	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2642180-2642605	Cluster_5616	Pocillopora_meandrina_HIv1___Sc0000020	2642180	2642605	426	609	70	0.9983579638752053	+	GGCCGUGAUCGUAUAGUGG	179	468	98	6	6	2	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2644695-2645122	Cluster_5617	Pocillopora_meandrina_HIv1___Sc0000020	2644695	2645122	428	201	95	0.9502487562189055	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	46	1	196	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2645517-2645926	Cluster_5618	Pocillopora_meandrina_HIv1___Sc0000020	2645517	2645926	410	167	100	0.6107784431137725	.	ACUGGAUACAAAACUGCUCGAUGC	18	2	121	1	2	7	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2844026-2844600	Cluster_5619	Pocillopora_meandrina_HIv1___Sc0000020	2844026	2844600	575	934	340	0.8029978586723768	+	UUCGAAGAGAACAAACUACCUGCAAGC	115	19	817	9	6	18	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2844636-2845066	Cluster_5620	Pocillopora_meandrina_HIv1___Sc0000020	2844636	2845066	431	1441	135	0.027758501040943788	-	AUGUGAUUUAAACGAGUCUUUACUCUGUCU	308	0	1411	3	6	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2848877-2849478	Cluster_5621	Pocillopora_meandrina_HIv1___Sc0000020	2848877	2849478	602	294	95	0.05782312925170068	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	62	1	273	0	2	6	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2873316-2873820	Cluster_5622	Pocillopora_meandrina_HIv1___Sc0000020	2873316	2873820	505	28206	581	0.9996100120541729	+	GGCCGUGAUCGUAUAGUGGUUAGUACAUU	8932	4203	23648	41	19	69	226	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:2989771-2990214	Cluster_5623	Pocillopora_meandrina_HIv1___Sc0000020	2989771	2990214	444	268	35	0.43656716417910446	.	UGUUUGAUUUUUACAGACUAGCGCUCUUAA	60	19	194	4	10	31	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3034007-3034545	Cluster_5624	Pocillopora_meandrina_HIv1___Sc0000020	3034007	3034545	539	601	226	0.09983361064891846	-	UCCGGUCAGAUUCUUUCCCACUAGCUC	46	18	530	0	9	12	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3036056-3036482	Cluster_5625	Pocillopora_meandrina_HIv1___Sc0000020	3036056	3036482	427	305	134	0.898360655737705	+	UUGGAACGUGUUGCUGAACGCUUGCU	40	27	247	6	13	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3038315-3038790	Cluster_5626	Pocillopora_meandrina_HIv1___Sc0000020	3038315	3038790	476	401	124	0.02493765586034913	-	UCAAUUGUUUACUUUCCUGGCAGGUUGCC	68	7	371	8	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3257820-3258260	Cluster_5627	Pocillopora_meandrina_HIv1___Sc0000020	3257820	3258260	441	1188	170	0.9806397306397306	+	UCUUCCACUGAUCGUUGAGUUGAAGACUA	208	22	1031	16	21	31	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3808509-3808933	Cluster_5628	Pocillopora_meandrina_HIv1___Sc0000020	3808509	3808933	425	155	46	0.0	-	AAGGAAAAGAUCUGAAUCACCGAAUGGUUU	40	5	144	2	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:3891312-3891737	Cluster_5629	Pocillopora_meandrina_HIv1___Sc0000020	3891312	3891737	426	115	31	0.9043478260869565	+	AUAGAUCCAAAAGGUAAAAUUCCAGAA	29	7	105	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4042336-4042752	Cluster_5630	Pocillopora_meandrina_HIv1___Sc0000020	4042336	4042752	417	156	51	0.057692307692307696	-	CUCUGUAGCAGUCAAUU	44	72	80	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4052858-4053283	Cluster_5631	Pocillopora_meandrina_HIv1___Sc0000020	4052858	4053283	426	196	68	0.9438775510204082	+	UUUGUUAGGAGAGUCUGCAACUAAGC	31	5	182	0	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4152005-4152427	Cluster_5632	Pocillopora_meandrina_HIv1___Sc0000020	4152005	4152427	423	85	35	0.9647058823529412	+	UGUGUAGAUAUGUCUUUUGGACAGGA	18	0	82	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4152989-4153419	Cluster_5633	Pocillopora_meandrina_HIv1___Sc0000020	4152989	4153419	431	618	178	0.9838187702265372	+	UGACUGACUGUGCUUGUGUACGAUACA	78	2	602	1	1	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4269388-4269816	Cluster_5634	Pocillopora_meandrina_HIv1___Sc0000020	4269388	4269816	429	282	117	0.7730496453900709	.	UGACUAUUCAACAGCUGUUCUUCUACCG	35	4	258	3	3	3	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4295667-4296096	Cluster_5635	Pocillopora_meandrina_HIv1___Sc0000020	4295667	4296096	430	185	54	0.010810810810810811	-	UGUGCCAAAGAUUUAGAACGAAAGAACGA	51	0	178	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4304724-4305153	Cluster_5636	Pocillopora_meandrina_HIv1___Sc0000020	4304724	4305153	430	196	80	0.9897959183673469	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	60	1	193	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4385038-4385501	Cluster_5637	Pocillopora_meandrina_HIv1___Sc0000020	4385038	4385501	464	677	148	0.930576070901034	+	UGUUUCAAAGAAAGUCACCAAGGCCAAGA	175	15	648	2	2	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4408578-4409006	Cluster_5638	Pocillopora_meandrina_HIv1___Sc0000020	4408578	4409006	429	165	52	0.0	-	UGUGCCAAAGAUUUAGAACGAAAGAACGA	35	0	162	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4615931-4616347	Cluster_5639	Pocillopora_meandrina_HIv1___Sc0000020	4615931	4616347	417	200	30	0.9	+	UCCCCGCAUCUCCACCU	112	184	12	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4625045-4625486	Cluster_5640	Pocillopora_meandrina_HIv1___Sc0000020	4625045	4625486	442	274	144	0.0	-	CCAGUCGCUGAAUUCGGGUACUGUAGACU	14	92	109	23	14	21	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4921931-4922354	Cluster_5641	Pocillopora_meandrina_HIv1___Sc0000020	4921931	4922354	424	106	24	1.0	+	UACCGUAGAACUUUCCAGAACAUU	50	10	24	1	1	4	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:4935851-4936265	Cluster_5642	Pocillopora_meandrina_HIv1___Sc0000020	4935851	4936265	415	203	18	0.0	-	CGCUUGAUUUUGAUU	156	203	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5066931-5067527	Cluster_5643	Pocillopora_meandrina_HIv1___Sc0000020	5066931	5067527	597	5654	507	0.9969932790944465	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	824	18	5591	4	5	7	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5120302-5120732	Cluster_5644	Pocillopora_meandrina_HIv1___Sc0000020	5120302	5120732	431	2425	197	0.01443298969072165	-	UUCGAAGAAACUCUUGCCAUCGCCUGGA	789	5	2355	0	4	8	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5121680-5122107	Cluster_5645	Pocillopora_meandrina_HIv1___Sc0000020	5121680	5122107	428	99	7	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	66	0	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5197520-5197934	Cluster_5646	Pocillopora_meandrina_HIv1___Sc0000020	5197520	5197934	415	77	5	0.974025974025974	+	AUCCAGCGAUCGCGG	65	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5222988-5223470	Cluster_5647	Pocillopora_meandrina_HIv1___Sc0000020	5222988	5223470	483	1076	190	0.9888475836431226	+	AAUGGGAAAACGAGAACAGCGUGA	95	33	640	20	12	157	214	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5315836-5316254	Cluster_5648	Pocillopora_meandrina_HIv1___Sc0000020	5315836	5316254	419	159	38	0.7924528301886793	.	AUAUGAGAUUAUGAAAGUA	91	136	13	3	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5327766-5328181	Cluster_5649	Pocillopora_meandrina_HIv1___Sc0000020	5327766	5328181	416	145	25	0.0	-	CAGCUGUGACCUCAUU	96	126	13	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5453827-5454256	Cluster_5650	Pocillopora_meandrina_HIv1___Sc0000020	5453827	5454256	430	1277	57	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUG	1021	0	1277	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5490480-5490903	Cluster_5651	Pocillopora_meandrina_HIv1___Sc0000020	5490480	5490903	424	241	108	0.7966804979253111	.	GUGGAGUUAAAAGUAGGGACAAC	14	16	161	6	7	25	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5542041-5542469	Cluster_5652	Pocillopora_meandrina_HIv1___Sc0000020	5542041	5542469	429	415	54	0.00963855421686747	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	296	1	403	3	0	7	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5542610-5543025	Cluster_5653	Pocillopora_meandrina_HIv1___Sc0000020	5542610	5543025	416	192	109	0.3802083333333333	.	UUUUGCUCUUUAUCGGGUGUCUGGACCAU	13	0	173	0	4	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5600503-5601310	Cluster_5654	Pocillopora_meandrina_HIv1___Sc0000020	5600503	5601310	808	153316	1098	0.9936405854574865	+	UUCUGCUGAACUACUUUGAGAACGAGU	75782	978	149469	94	87	241	2447	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5780162-5780592	Cluster_5655	Pocillopora_meandrina_HIv1___Sc0000020	5780162	5780592	431	750	80	0.992	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	243	2	742	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5821891-5822314	Cluster_5656	Pocillopora_meandrina_HIv1___Sc0000020	5821891	5822314	424	554	69	0.8754512635379061	+	AGUGACAAGAUUUUUCCUGAUGUA	205	10	61	5	46	196	236	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5872644-5873058	Cluster_5657	Pocillopora_meandrina_HIv1___Sc0000020	5872644	5873058	415	380	13	0.02368421052631579	-	GGUUGGAUCCGGCCA	362	373	3	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5914229-5914656	Cluster_5658	Pocillopora_meandrina_HIv1___Sc0000020	5914229	5914656	428	99	10	0.98989898989899	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	43	0	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5915278-5915693	Cluster_5659	Pocillopora_meandrina_HIv1___Sc0000020	5915278	5915693	416	103	62	0.9805825242718447	+	UGGGAAAACGAGAACAGCGUGAGUGUUU	13	0	81	3	0	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5931893-5932319	Cluster_5660	Pocillopora_meandrina_HIv1___Sc0000020	5931893	5932319	427	141	42	0.0070921985815602835	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	40	2	135	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5977080-5978351	Cluster_5661	Pocillopora_meandrina_HIv1___Sc0000020	5977080	5978351	1272	1252	507	0.08945686900958466	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	83	15	1194	5	1	10	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5979221-5979648	Cluster_5662	Pocillopora_meandrina_HIv1___Sc0000020	5979221	5979648	428	139	49	0.08633093525179857	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	58	0	129	0	4	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5979732-5980211	Cluster_5663	Pocillopora_meandrina_HIv1___Sc0000020	5979732	5980211	480	355	135	0.09577464788732394	-	UCCAAUCACACACAGUUCUCCUGCGGC	82	5	328	0	3	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5980533-5980960	Cluster_5664	Pocillopora_meandrina_HIv1___Sc0000020	5980533	5980960	428	268	123	0.029850746268656716	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	33	2	256	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:5981188-5981602	Cluster_5665	Pocillopora_meandrina_HIv1___Sc0000020	5981188	5981602	415	185	105	0.04864864864864865	-	UGCGAAUCUGAAAAUUGGACGGAGAGC	21	4	170	1	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6091599-6092028	Cluster_5666	Pocillopora_meandrina_HIv1___Sc0000020	6091599	6092028	430	368	45	0.970108695652174	+	CGAAGAUGGAAUCAAUAAAUGCAGAACAGG	144	5	315	4	44	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6480082-6480500	Cluster_5667	Pocillopora_meandrina_HIv1___Sc0000020	6480082	6480500	419	161	22	0.0	-	UUUGACAACUUUUGACGGA	57	161	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6695856-6696272	Cluster_5668	Pocillopora_meandrina_HIv1___Sc0000020	6695856	6696272	417	235	9	0.01702127659574468	-	AUGGAAGAAGAUCUUUU	198	231	2	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000020:6703789-6704212	Cluster_5669	Pocillopora_meandrina_HIv1___Sc0000020	6703789	6704212	424	777	80	0.9974259974259975	+	GACGGAUUGAGGAAGCA	543	648	71	7	11	3	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:191190-191604	Cluster_5670	Pocillopora_meandrina_HIv1___Sc0000021	191190	191604	415	2026	18	0.9970384995064165	+	GGUUGGAUCCGGCCA	1981	2019	2	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:193763-194190	Cluster_5671	Pocillopora_meandrina_HIv1___Sc0000021	193763	194190	428	88	13	0.022727272727272728	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	41	1	86	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:324463-324937	Cluster_5672	Pocillopora_meandrina_HIv1___Sc0000021	324463	324937	475	45749	2466	0.9982950447004306	+	GAGGUCCGGACGGUGGAGGGUUAUCCACU	5122	10709	29736	2175	1501	878	750	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:326001-326467	Cluster_5673	Pocillopora_meandrina_HIv1___Sc0000021	326001	326467	467	2781	446	0.9964041711614527	+	AUACCCUUCUCAUAACUUGACUUCCU	270	372	1886	99	180	101	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:326663-327132	Cluster_5674	Pocillopora_meandrina_HIv1___Sc0000021	326663	327132	470	240424	4128	0.9995008817755299	+	GAGGUCCGGACGGCUGAGGGUUAUCUCACA	47919	30385	176287	10144	12583	6898	4127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:593502-593928	Cluster_5675	Pocillopora_meandrina_HIv1___Sc0000021	593502	593928	427	273	214	1.0	+	CGGAGUGCCUGAUGAAAAGACA	5	86	97	27	25	12	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:608946-609366	Cluster_5676	Pocillopora_meandrina_HIv1___Sc0000021	608946	609366	421	242	178	0.9958677685950413	+	UUGCGGUAGAAAUACGGAAGAGACU	5	64	93	20	17	17	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:758132-758551	Cluster_5677	Pocillopora_meandrina_HIv1___Sc0000021	758132	758551	420	1899	91	0.9994734070563455	+	CCCGGGUCUCGGCACCA	629	1899	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:784913-785341	Cluster_5678	Pocillopora_meandrina_HIv1___Sc0000021	784913	785341	429	137	38	0.014598540145985401	-	UAAGCAACAUGGGAGCUAUGGUAUUCUUG	33	7	115	3	9	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:896386-896814	Cluster_5679	Pocillopora_meandrina_HIv1___Sc0000021	896386	896814	429	497	62	0.01609657947686117	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	303	3	490	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:916951-917365	Cluster_5680	Pocillopora_meandrina_HIv1___Sc0000021	916951	917365	415	96	15	0.0	-	CGGGCUGAGAUUUGU	75	89	5	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:975531-975948	Cluster_5681	Pocillopora_meandrina_HIv1___Sc0000021	975531	975948	418	252	161	0.003968253968253968	-	AGCCGGUUUUAGGAAUGUUA	9	87	64	34	26	27	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:985212-985614	Cluster_5682	Pocillopora_meandrina_HIv1___Sc0000021	985212	985614	403	131	53	0.0	-	GUGUGGUCCGGACGGG	60	101	18	4	3	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1005509-1005931	Cluster_5683	Pocillopora_meandrina_HIv1___Sc0000021	1005509	1005931	423	295	159	0.0	-	AAAAAGAAUGGGACUGUCUGUAAUA	26	101	98	14	17	43	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1065156-1065870	Cluster_5684	Pocillopora_meandrina_HIv1___Sc0000021	1065156	1065870	715	372	195	0.10483870967741936	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	24	7	334	3	3	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1068005-1068536	Cluster_5685	Pocillopora_meandrina_HIv1___Sc0000021	1068005	1068536	532	783	268	0.05874840357598978	-	UGUACUAAUCUUUCCGCCUGACCAUUGGUU	116	9	739	5	4	10	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1068665-1069095	Cluster_5686	Pocillopora_meandrina_HIv1___Sc0000021	1068665	1069095	431	654	179	0.013761467889908258	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	124	6	634	4	2	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1316204-1316618	Cluster_5687	Pocillopora_meandrina_HIv1___Sc0000021	1316204	1316618	415	153	20	0.0	-	UCGACCGUGGUGGAU	53	153	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1499718-1500140	Cluster_5688	Pocillopora_meandrina_HIv1___Sc0000021	1499718	1500140	423	1230	66	0.9983739837398374	+	UGUGAUUGGAGACUUUUAUCGU	674	56	1	10	1084	66	13	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1662373-1662790	Cluster_5689	Pocillopora_meandrina_HIv1___Sc0000021	1662373	1662790	418	111	45	0.8828828828828829	+	UGCUUUGGACGAAAUUUCGAGGUUCACACC	17	5	90	5	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1663270-1663727	Cluster_5690	Pocillopora_meandrina_HIv1___Sc0000021	1663270	1663727	458	5048	163	0.014064976228209191	-	UGCAUUGUGUUUGCUUCCAGACUUGACUU	1155	73	4914	3	14	26	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1663833-1664359	Cluster_5691	Pocillopora_meandrina_HIv1___Sc0000021	1663833	1664359	527	1294	183	0.9219474497681608	+	AUUUUAAUCAUGUUGGGACUUAAAGGUG	238	18	1178	2	15	49	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1708235-1708663	Cluster_5692	Pocillopora_meandrina_HIv1___Sc0000021	1708235	1708663	429	187	54	0.5721925133689839	.	UACCAUAGAUCUCUCCAAAGCAUUUGACU	32	4	176	3	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1805532-1805954	Cluster_5693	Pocillopora_meandrina_HIv1___Sc0000021	1805532	1805954	423	168	12	0.0	-	UUUAGAUUGUGUAAGUAGUGUGA	89	10	1	14	40	92	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1807854-1808415	Cluster_5694	Pocillopora_meandrina_HIv1___Sc0000021	1807854	1808415	562	1085	268	0.5788018433179724	.	AAAAGAACGAAGACGCUGCCAAGA	63	78	831	38	16	25	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1810323-1810759	Cluster_5695	Pocillopora_meandrina_HIv1___Sc0000021	1810323	1810759	437	1002	143	0.9570858283433133	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	412	22	951	13	6	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1814973-1815409	Cluster_5696	Pocillopora_meandrina_HIv1___Sc0000021	1814973	1815409	437	823	136	0.795868772782503	.	UCAAGCUCUUCCUGACACCUGUUGUGU	227	10	740	6	8	13	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:1823807-1824425	Cluster_5697	Pocillopora_meandrina_HIv1___Sc0000021	1823807	1824425	619	560	130	0.6321428571428571	.	AAGGAUACCACAUUCGGAAGUGUAAGAGA	114	31	466	8	7	33	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2036658-2037086	Cluster_5698	Pocillopora_meandrina_HIv1___Sc0000021	2036658	2037086	429	168	8	0.0	-	UAACGAGAUUAAAAUGGCAAUGAACAAUA	105	2	166	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2067953-2068642	Cluster_5699	Pocillopora_meandrina_HIv1___Sc0000021	2067953	2068642	690	1353	348	0.4604582409460458	.	GUACUCGAUAUUGUCUGGAAUUCUGCCA	303	12	1285	4	12	13	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2068762-2069179	Cluster_5700	Pocillopora_meandrina_HIv1___Sc0000021	2068762	2069179	418	163	86	0.7668711656441718	.	UCCGGUCAAUGUUUAGAGAGCUGAAUAAAU	14	0	146	2	1	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2290519-2290934	Cluster_5701	Pocillopora_meandrina_HIv1___Sc0000021	2290519	2290934	416	752	25	0.9946808510638298	+	UCUGGAGUUAAGGCG	394	749	2	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2342535-2343348	Cluster_5702	Pocillopora_meandrina_HIv1___Sc0000021	2342535	2343348	814	429	234	0.09324009324009325	-	UGAUUUUGGAAUGUUGUUUACGUUGUGCA	19	4	399	3	1	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2362599-2363026	Cluster_5703	Pocillopora_meandrina_HIv1___Sc0000021	2362599	2363026	428	136	63	0.17647058823529413	-	UGUGUUAACGUUUCACGGACAAGCUACCGA	46	20	108	2	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2484436-2485055	Cluster_5704	Pocillopora_meandrina_HIv1___Sc0000021	2484436	2485055	620	713	149	0.5750350631136045	.	UGAAGAAUUCACAGUUACUUACUUUAGAUA	92	13	683	4	0	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2487317-2487747	Cluster_5705	Pocillopora_meandrina_HIv1___Sc0000021	2487317	2487747	431	803	130	0.0049813200498132005	-	CAACAAAUCAAACUUGGAGGCUCUUCA	107	3	756	6	2	12	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2598247-2598676	Cluster_5706	Pocillopora_meandrina_HIv1___Sc0000021	2598247	2598676	430	610	137	0.9918032786885246	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	126	2	603	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2598797-2599327	Cluster_5707	Pocillopora_meandrina_HIv1___Sc0000021	2598797	2599327	531	597	229	0.9899497487437185	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	35	5	583	3	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2601469-2601896	Cluster_5708	Pocillopora_meandrina_HIv1___Sc0000021	2601469	2601896	428	156	72	0.9487179487179487	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	27	0	149	1	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2658471-2658887	Cluster_5709	Pocillopora_meandrina_HIv1___Sc0000021	2658471	2658887	417	110	31	0.7090909090909091	.	CAAACCACUAAUUGUUGA	57	77	32	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2907106-2907527	Cluster_5710	Pocillopora_meandrina_HIv1___Sc0000021	2907106	2907527	422	141	30	0.0	-	CGGGCUGUGAAAUAUCUUUA	39	47	36	8	17	8	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:2924427-2924957	Cluster_5711	Pocillopora_meandrina_HIv1___Sc0000021	2924427	2924957	531	1262	372	1.0	+	AGUUGAUGAUGAUAAACACUGCGC	286	167	342	57	48	167	481	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3151853-3152285	Cluster_5712	Pocillopora_meandrina_HIv1___Sc0000021	3151853	3152285	433	317	88	0.9873817034700315	+	UGUACAUUCUCCCGAUCGCAGGACAGCU	41	0	311	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3254633-3255037	Cluster_5713	Pocillopora_meandrina_HIv1___Sc0000021	3254633	3255037	405	191	90	0.9895287958115183	+	UACGUAGACAUGAUACCC	24	44	138	1	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3261369-3262002	Cluster_5714	Pocillopora_meandrina_HIv1___Sc0000021	3261369	3262002	634	2027	278	0.011840157868771583	-	UGAACCGUGCCGAUCUGCUGCCCUUUGA	429	9	1984	3	3	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3399015-3399445	Cluster_5715	Pocillopora_meandrina_HIv1___Sc0000021	3399015	3399445	431	769	113	0.002600780234070221	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	346	36	716	8	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3402070-3402499	Cluster_5716	Pocillopora_meandrina_HIv1___Sc0000021	3402070	3402499	430	175	51	0.0	-	GAGGUCCGGAUGGUUGAGGGUUACCAAAUC	59	23	146	2	3	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3403523-3403994	Cluster_5717	Pocillopora_meandrina_HIv1___Sc0000021	3403523	3403994	472	123231	1757	0.00014606714219636292	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	27144	13159	103199	3013	1766	823	1271	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3412619-3413043	Cluster_5718	Pocillopora_meandrina_HIv1___Sc0000021	3412619	3413043	425	236	136	0.21610169491525424	.	UCCUGACAUGAUUCUUUGAGUUCUUUC	19	6	219	0	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3414502-3414908	Cluster_5719	Pocillopora_meandrina_HIv1___Sc0000021	3414502	3414908	407	84	26	0.2261904761904762	.	UGUUACAAAACCAUUAGAACUAUCAGUU	19	1	69	0	2	0	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3418513-3419451	Cluster_5720	Pocillopora_meandrina_HIv1___Sc0000021	3418513	3419451	939	11299	977	0.002478095406673157	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	1154	1200	9198	313	222	157	209	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3422717-3423187	Cluster_5721	Pocillopora_meandrina_HIv1___Sc0000021	3422717	3423187	471	17979	855	0.000945547583291618	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	2850	2033	14370	663	445	253	215	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3424993-3425419	Cluster_5722	Pocillopora_meandrina_HIv1___Sc0000021	3424993	3425419	427	126	42	0.0	-	GAGGUCCGGAUGGGU	23	52	72	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3426420-3426906	Cluster_5723	Pocillopora_meandrina_HIv1___Sc0000021	3426420	3426906	487	1536	422	0.9895833333333334	+	CUCCCCUCUUCCACUCACUUGACCUCCU	105	427	867	79	78	51	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3428560-3429035	Cluster_5724	Pocillopora_meandrina_HIv1___Sc0000021	3428560	3429035	476	33530	945	0.0033701163137488817	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	6621	3266	27754	943	746	439	382	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3442714-3443124	Cluster_5725	Pocillopora_meandrina_HIv1___Sc0000021	3442714	3443124	411	123	80	0.04878048780487805	-	CAUCCGCUACUUUGACUU	7	78	21	15	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3460874-3461359	Cluster_5726	Pocillopora_meandrina_HIv1___Sc0000021	3460874	3461359	486	331	90	0.972809667673716	+	GAGGUCCGGAUGGUUGAGGGUUAUCAAAUC	58	51	252	13	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3462997-3463468	Cluster_5727	Pocillopora_meandrina_HIv1___Sc0000021	3462997	3463468	472	7991	703	0.003378801151295207	-	CACCCCUCAUCCGCUACUUUGACCUCAUU	945	851	6427	293	216	115	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:3535980-3536395	Cluster_5728	Pocillopora_meandrina_HIv1___Sc0000021	3535980	3536395	416	411	27	0.0024330900243309003	-	AGUGUGCUCCUAACU	216	409	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4157525-4157935	Cluster_5729	Pocillopora_meandrina_HIv1___Sc0000021	4157525	4157935	411	127	67	0.36220472440944884	.	UGAGGACAUAACUACAACAGAAGACACAACA	7	16	103	4	3	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4236543-4236968	Cluster_5730	Pocillopora_meandrina_HIv1___Sc0000021	4236543	4236968	426	107	33	0.9719626168224299	+	UGUGUAGAUAUGUCUUUUGGACAGGA	33	0	107	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4328885-4329594	Cluster_5731	Pocillopora_meandrina_HIv1___Sc0000021	4328885	4329594	710	1188	303	0.8232323232323232	+	UUCGGCAAAAACUAAAAGCGGGCGAAGA	287	6	1099	6	3	15	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4351639-4352057	Cluster_5732	Pocillopora_meandrina_HIv1___Sc0000021	4351639	4352057	419	161	43	1.0	+	ACUGAUAUUCACCAAGUG	32	75	4	42	24	13	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4582089-4582510	Cluster_5733	Pocillopora_meandrina_HIv1___Sc0000021	4582089	4582510	422	119	25	0.03361344537815126	-	UGGGCUGAAAUCAUACACGUGA	32	8	4	20	36	35	16	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4665570-4666091	Cluster_5734	Pocillopora_meandrina_HIv1___Sc0000021	4665570	4666091	522	380	125	0.013157894736842105	-	UCGAAUCCCACUUCUGACACCA	100	237	7	23	105	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4684925-4685352	Cluster_5735	Pocillopora_meandrina_HIv1___Sc0000021	4684925	4685352	428	93	24	1.0	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	30	0	91	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4711499-4711915	Cluster_5736	Pocillopora_meandrina_HIv1___Sc0000021	4711499	4711915	417	171	60	0.2807017543859649	.	GUGGUGGACUGCUUGCAAU	21	143	21	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:4905508-4906190	Cluster_5737	Pocillopora_meandrina_HIv1___Sc0000021	4905508	4906190	683	4296	515	0.319366852886406	.	GUAUCUUCGAAGCUGGAUUACUGUAAUGCC	307	13	4142	7	11	27	96	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5105603-5106129	Cluster_5738	Pocillopora_meandrina_HIv1___Sc0000021	5105603	5106129	527	773	137	0.4217335058214748	.	UAUUCUUAUCAUCUGCGUUUGGUCUACUGC	115	5	756	0	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5110514-5110942	Cluster_5739	Pocillopora_meandrina_HIv1___Sc0000021	5110514	5110942	429	179	9	0.9888268156424581	+	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	151	1	177	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5129429-5129854	Cluster_5740	Pocillopora_meandrina_HIv1___Sc0000021	5129429	5129854	426	103	42	0.9320388349514563	+	UGAAACUCUGGUCUGAAAAUAUUUUUAAAAC	24	5	94	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5192296-5192709	Cluster_5741	Pocillopora_meandrina_HIv1___Sc0000021	5192296	5192709	414	77	14	0.0	-	AAGCUGUGACCCUCA	36	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5199336-5199754	Cluster_5742	Pocillopora_meandrina_HIv1___Sc0000021	5199336	5199754	419	226	50	0.017699115044247787	-	CACCCCUUGUAGUAGUCAG	40	213	1	7	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5276848-5277938	Cluster_5743	Pocillopora_meandrina_HIv1___Sc0000021	5276848	5277938	1091	105483	2458	0.9999525989969947	+	UUCAUUCUAACAGACGCUUUGUAAAAUCCU	9773	304	102764	184	567	1495	169	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5278062-5278487	Cluster_5744	Pocillopora_meandrina_HIv1___Sc0000021	5278062	5278487	426	247	102	0.9959514170040485	+	UUCUUUGACGUGUUACACCAUACAGAUGGUC	53	4	237	1	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5306354-5306783	Cluster_5745	Pocillopora_meandrina_HIv1___Sc0000021	5306354	5306783	430	1180	78	0.9966101694915255	+	UUCGAAUGAAGCAAGGUGUUCCUGAACUU	600	7	1168	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5319271-5319708	Cluster_5746	Pocillopora_meandrina_HIv1___Sc0000021	5319271	5319708	438	469	143	0.997867803837953	+	GUUAGAAUGAAGAAGGGCGUUCCUUCACU	44	98	323	11	2	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5329308-5329728	Cluster_5747	Pocillopora_meandrina_HIv1___Sc0000021	5329308	5329728	421	111	62	1.0	+	UCGUUUCUUCUGGAAUCUCAAUUCUGUGGA	10	0	107	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5602206-5603069	Cluster_5748	Pocillopora_meandrina_HIv1___Sc0000021	5602206	5603069	864	1989	358	0.029663147310206132	-	UGUUCUGGACGUACGCAUUCACGAUCUCGC	121	5	1958	5	3	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5603857-5604284	Cluster_5749	Pocillopora_meandrina_HIv1___Sc0000021	5603857	5604284	428	220	83	0.10909090909090909	-	UGAAUUCUUCGUAAACGGUUUCCUGGUC	70	3	205	0	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5605710-5606138	Cluster_5750	Pocillopora_meandrina_HIv1___Sc0000021	5605710	5606138	429	175	68	0.14285714285714285	-	UUUGCUUGCCAGAUCCUUUAUCCAAUGAA	24	3	150	0	0	4	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5607117-5607544	Cluster_5751	Pocillopora_meandrina_HIv1___Sc0000021	5607117	5607544	428	153	38	0.0	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	45	0	153	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5659077-5659491	Cluster_5752	Pocillopora_meandrina_HIv1___Sc0000021	5659077	5659491	415	154	38	0.22077922077922077	.	GGAGGUUGGCUUAGA	75	133	13	2	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5659494-5659922	Cluster_5753	Pocillopora_meandrina_HIv1___Sc0000021	5659494	5659922	429	240	68	0.9916666666666667	+	AGAAGAUGGUUCAUACACUGUUGUUAUGA	73	21	196	7	9	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5770832-5771370	Cluster_5754	Pocillopora_meandrina_HIv1___Sc0000021	5770832	5771370	539	3491	630	0.998281294757949	+	CUAUGACUGGUCAUUUCAACUGUAACAUUG	333	385	2041	61	169	225	610	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5811526-5811954	Cluster_5755	Pocillopora_meandrina_HIv1___Sc0000021	5811526	5811954	429	284	150	1.0	+	UGGCAAAAUCUACGAGGUCCGACUCAUGAU	28	66	178	7	11	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5820043-5820457	Cluster_5756	Pocillopora_meandrina_HIv1___Sc0000021	5820043	5820457	415	230	50	0.24782608695652175	.	ACGACUGCUGCCGGU	168	205	15	3	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5886427-5886842	Cluster_5757	Pocillopora_meandrina_HIv1___Sc0000021	5886427	5886842	416	404	22	0.0	-	CGUGGAAGGUAGGUCC	259	399	4	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:5973937-5974361	Cluster_5758	Pocillopora_meandrina_HIv1___Sc0000021	5973937	5974361	425	89	29	0.02247191011235955	-	UGUGUAGAUAUGUCUUUUGGACAGGA	23	0	88	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6003028-6003443	Cluster_5759	Pocillopora_meandrina_HIv1___Sc0000021	6003028	6003443	416	597	26	0.0	-	UUGACAACUUUUGACA	311	596	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6041010-6041435	Cluster_5760	Pocillopora_meandrina_HIv1___Sc0000021	6041010	6041435	426	164	68	0.9878048780487805	+	UGAUUGACGUACGGUAUUUGAGACGC	19	1	152	1	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6107460-6107961	Cluster_5761	Pocillopora_meandrina_HIv1___Sc0000021	6107460	6107961	502	479	118	0.0709812108559499	-	UGAAUGACUUCGUUUGUGCAUUGGUAGGC	85	0	467	1	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6157720-6158164	Cluster_5762	Pocillopora_meandrina_HIv1___Sc0000021	6157720	6158164	445	613	208	0.6231647634584013	.	UCACGGUAGUAGUGUUGUUCAAUAGAUU	71	22	466	4	11	70	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6160724-6161150	Cluster_5763	Pocillopora_meandrina_HIv1___Sc0000021	6160724	6161150	427	175	37	0.0	-	UGAUAUCAUCUUUAGCUCUUGAAAAUG	87	7	168	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6165598-6166346	Cluster_5764	Pocillopora_meandrina_HIv1___Sc0000021	6165598	6166346	749	679	252	0.05743740795287187	-	UUCAUGAUCGUUAUGCGAUAGCAGCAAC	51	6	607	1	1	7	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6166615-6167399	Cluster_5765	Pocillopora_meandrina_HIv1___Sc0000021	6166615	6167399	785	533	256	0.11444652908067542	-	UGGUUGAAUGAUGUUGUCGAGUAGAUU	59	12	455	3	21	16	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6171648-6172089	Cluster_5766	Pocillopora_meandrina_HIv1___Sc0000021	6171648	6172089	442	406	189	0.034482758620689655	-	UACUCUUUGUGGACUUUAAACGAUCGUAA	40	19	373	1	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6172139-6172585	Cluster_5767	Pocillopora_meandrina_HIv1___Sc0000021	6172139	6172585	447	515	206	0.0	-	UGCUUUCUCGAUGACUGCUUGUUGUGC	40	10	484	10	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6173344-6174077	Cluster_5768	Pocillopora_meandrina_HIv1___Sc0000021	6173344	6174077	734	478	197	0.006276150627615063	-	UGAGUUUGUAGAAGCAAUUUGCCGUCUGC	92	11	458	1	3	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6181743-6182314	Cluster_5769	Pocillopora_meandrina_HIv1___Sc0000021	6181743	6182314	572	595	240	0.08907563025210084	-	UGUUUGUGGUAGACUUGUUUUUGACGUG	50	21	460	10	31	34	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6183967-6184395	Cluster_5770	Pocillopora_meandrina_HIv1___Sc0000021	6183967	6184395	429	455	132	0.03956043956043956	-	UGUAGAAUCAAUCUGUUACUAAGACACC	107	4	422	14	2	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6186532-6186960	Cluster_5771	Pocillopora_meandrina_HIv1___Sc0000021	6186532	6186960	429	256	145	0.16796875	-	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	21	3	235	1	0	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6188190-6189044	Cluster_5772	Pocillopora_meandrina_HIv1___Sc0000021	6188190	6189044	855	527	257	0.09108159392789374	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	35	4	499	1	3	6	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6191858-6192273	Cluster_5773	Pocillopora_meandrina_HIv1___Sc0000021	6191858	6192273	416	213	62	0.046948356807511735	-	UGUAUCCCAACCAAGU	131	136	67	2	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6192308-6193276	Cluster_5774	Pocillopora_meandrina_HIv1___Sc0000021	6192308	6193276	969	7102	756	0.036750211208110395	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	1777	30	6958	7	19	32	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6200869-6201439	Cluster_5775	Pocillopora_meandrina_HIv1___Sc0000021	6200869	6201439	571	444	192	0.0472972972972973	-	UUGGAACUAUUGGUGUACUAGCGCUCGAU	20	25	408	0	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6201989-6202417	Cluster_5776	Pocillopora_meandrina_HIv1___Sc0000021	6201989	6202417	429	501	83	0.001996007984031936	-	UUGUAAACUUCUCGAACAUUGGCCUAUU	117	6	488	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6211840-6212255	Cluster_5777	Pocillopora_meandrina_HIv1___Sc0000021	6211840	6212255	416	161	77	0.006211180124223602	-	UUAACGACUUCAAUGAUUGCUCUUUUGGC	15	2	158	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6214988-6215440	Cluster_5778	Pocillopora_meandrina_HIv1___Sc0000021	6214988	6215440	453	389	198	0.015424164524421594	-	UGUAUGUGAGCGGCCUUGACUUGGUUGUA	23	8	360	5	3	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6215617-6216857	Cluster_5779	Pocillopora_meandrina_HIv1___Sc0000021	6215617	6216857	1241	11004	1511	0.026172300981461286	-	UCUGACUGACUAACAGGAUAUCUGCUUC	693	52	10656	26	28	73	169	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6219624-6220590	Cluster_5780	Pocillopora_meandrina_HIv1___Sc0000021	6219624	6220590	967	27645	1433	0.0013383975402423585	-	UAUGUUGAAUGAGAACUGGAGACCUCGAUU	4311	631	26241	86	152	216	319	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6220880-6221308	Cluster_5781	Pocillopora_meandrina_HIv1___Sc0000021	6220880	6221308	429	402	58	0.009950248756218905	-	UAACGAGAUUAAAAUGGCAAUGAACAAUA	214	1	398	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6221535-6221964	Cluster_5782	Pocillopora_meandrina_HIv1___Sc0000021	6221535	6221964	430	414	131	0.0	-	UGCAUUGGCAUGUUUAACUUAAGUU	53	1	379	12	1	0	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6222052-6222481	Cluster_5783	Pocillopora_meandrina_HIv1___Sc0000021	6222052	6222481	430	759	135	0.0	-	UGUAUUCGGACAUUUGCAAUUCCACAGG	146	4	739	3	6	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6223464-6223892	Cluster_5784	Pocillopora_meandrina_HIv1___Sc0000021	6223464	6223892	429	224	90	0.03571428571428571	-	UGCAACAAGUUUGGUUUAUGGACAAAAUC	19	5	205	3	1	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6226713-6227743	Cluster_5785	Pocillopora_meandrina_HIv1___Sc0000021	6226713	6227743	1031	18273	1994	0.0016417665407978984	-	UCACAGAACCUGAACCCUCUAAUGGAUGGUC	2944	210	17696	45	110	94	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6228305-6229009	Cluster_5786	Pocillopora_meandrina_HIv1___Sc0000021	6228305	6229009	705	5333	936	0.04181511344459029	-	UCAGUGUACUUGAGAUUGUGCAGCUCA	547	83	5006	41	18	90	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6229283-6231268	Cluster_5787	Pocillopora_meandrina_HIv1___Sc0000021	6229283	6231268	1986	4224	880	0.016571969696969696	-	UGAUACUUGCAUCAACUUGCACUACUGGC	595	73	4082	12	9	26	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6232091-6233002	Cluster_5788	Pocillopora_meandrina_HIv1___Sc0000021	6232091	6233002	912	734	313	0.010899182561307902	-	UAAAUUCACUGGUUCUCUGGAGUCAACC	28	20	696	4	2	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6485758-6486209	Cluster_5789	Pocillopora_meandrina_HIv1___Sc0000021	6485758	6486209	452	670	266	0.8970149253731343	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	102	7	606	1	4	12	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6486565-6486991	Cluster_5790	Pocillopora_meandrina_HIv1___Sc0000021	6486565	6486991	427	332	138	0.9096385542168675	+	UCCAAUCACACACAGUUCUCCUGCGGC	52	2	313	1	2	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6487009-6487615	Cluster_5791	Pocillopora_meandrina_HIv1___Sc0000021	6487009	6487615	607	1535	441	0.7687296416938111	.	ACCGCUUUUAAGAUUCUGAAAC	96	23	1241	30	114	37	90	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000021:6488372-6489644	Cluster_5792	Pocillopora_meandrina_HIv1___Sc0000021	6488372	6489644	1273	2935	832	0.9063032367972743	+	UUUUACAUGUUUGACCUCUGGCAGGGCA	346	35	2736	12	15	49	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:155778-156215	Cluster_5793	Pocillopora_meandrina_HIv1___Sc0000022	155778	156215	438	215	100	0.44651162790697674	.	UGAUAAAAAAACAGCAACAUCUCUGCCAGC	28	11	191	2	2	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:158085-158499	Cluster_5794	Pocillopora_meandrina_HIv1___Sc0000022	158085	158499	415	155	81	0.8129032258064516	+	UUCAAUCUCAGACCAUCCAGAUACU	16	3	141	0	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:159825-160246	Cluster_5795	Pocillopora_meandrina_HIv1___Sc0000022	159825	160246	422	265	119	0.7396226415094339	.	AGUGUUCUUAGUCAGCUGAAAGAAAUUUU	18	4	245	3	0	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:160663-161072	Cluster_5796	Pocillopora_meandrina_HIv1___Sc0000022	160663	161072	410	181	91	0.5966850828729282	.	UCGGAAUAUCAUUUUGAAGUCAUUUAUG	23	2	149	1	2	15	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:282851-283277	Cluster_5797	Pocillopora_meandrina_HIv1___Sc0000022	282851	283277	427	151	42	0.7814569536423841	.	CUGUAAUAAAACUAUCUACUGGCAAGU	43	0	146	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:318503-318947	Cluster_5798	Pocillopora_meandrina_HIv1___Sc0000022	318503	318947	445	527	90	0.9981024667931688	+	UGAUAUAUGUUCAUGUUUGGGUGUAAGUGC	67	0	521	0	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:554095-554523	Cluster_5799	Pocillopora_meandrina_HIv1___Sc0000022	554095	554523	429	615	163	0.9934959349593496	+	UGUUGAUGUAACCGUGAUCUUUGAAGG	91	3	564	7	3	11	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:554720-555134	Cluster_5800	Pocillopora_meandrina_HIv1___Sc0000022	554720	555134	415	192	103	0.921875	+	UGGUGACUAGCUCGAACUCAUAAGCGG	10	2	175	1	0	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:555710-556154	Cluster_5801	Pocillopora_meandrina_HIv1___Sc0000022	555710	556154	445	481	203	0.918918918918919	+	UCGAAUCAAAGUACUUGAGGACUGGGG	27	5	461	0	0	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:556205-556633	Cluster_5802	Pocillopora_meandrina_HIv1___Sc0000022	556205	556633	429	251	104	0.9561752988047809	+	UGAAAAAUUUCCGGGGCUGGAGUAAUUCC	33	5	242	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:556704-557595	Cluster_5803	Pocillopora_meandrina_HIv1___Sc0000022	556704	557595	892	1831	429	0.8203167667941016	+	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	823	19	1707	7	8	21	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:557670-558303	Cluster_5804	Pocillopora_meandrina_HIv1___Sc0000022	557670	558303	634	1608	410	0.8519900497512438	+	UGUGAUAAAUGCAGCCACUCGAUACUCG	90	15	1530	7	12	10	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:558307-558725	Cluster_5805	Pocillopora_meandrina_HIv1___Sc0000022	558307	558725	419	184	112	0.13043478260869565	-	UCUUGUGAUCUAUUCGAAUUGUUUGUGAU	9	9	143	6	8	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:559206-559633	Cluster_5806	Pocillopora_meandrina_HIv1___Sc0000022	559206	559633	428	137	35	0.9927007299270073	+	UGUAAAAUCUGGCAUCCUAUUGGAUAAC	74	2	134	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:561059-562462	Cluster_5807	Pocillopora_meandrina_HIv1___Sc0000022	561059	562462	1404	9318	1192	0.9568576947842885	+	UUGGAUUGUAAUAAGGUACAAGAGGCUG	1589	96	8885	40	49	155	93	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:568214-568797	Cluster_5808	Pocillopora_meandrina_HIv1___Sc0000022	568214	568797	584	962	345	0.9927234927234927	+	UGUUCUUCUUGACUCUGACGAUCUUCAAC	109	7	943	0	2	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:569079-569951	Cluster_5809	Pocillopora_meandrina_HIv1___Sc0000022	569079	569951	873	891	379	0.98989898989899	+	UGCUGAAACGAUUUUGACAGGUUGUCA	64	5	841	5	9	11	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:570341-571206	Cluster_5810	Pocillopora_meandrina_HIv1___Sc0000022	570341	571206	866	1169	426	0.9931565440547476	+	UGAAUUUUCUUCGUCUGCUGUUCUUCAGU	88	7	1137	3	4	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:571607-572035	Cluster_5811	Pocillopora_meandrina_HIv1___Sc0000022	571607	572035	429	195	105	0.9794871794871794	+	UGUGAUUUCUGCCUUUUCAUCCGGUGACU	14	3	187	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:572521-574176	Cluster_5812	Pocillopora_meandrina_HIv1___Sc0000022	572521	574176	1656	9124	2383	0.9239368697939501	+	UGAUAGACUGCACGACGAUUUACGUCA	487	131	8246	72	69	273	333	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:574230-575302	Cluster_5813	Pocillopora_meandrina_HIv1___Sc0000022	574230	575302	1073	8550	661	0.995672514619883	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2222	13	8412	5	39	31	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:579552-579976	Cluster_5814	Pocillopora_meandrina_HIv1___Sc0000022	579552	579976	425	103	49	1.0	+	UGUGUAGAUAUGUCUUUUGGACAGGA	24	2	99	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:583226-583653	Cluster_5815	Pocillopora_meandrina_HIv1___Sc0000022	583226	583653	428	220	111	0.9818181818181818	+	UCGGACUUGACUGCGUAAAUGGCGUGAAA	22	8	201	0	2	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:591923-593905	Cluster_5816	Pocillopora_meandrina_HIv1___Sc0000022	591923	593905	1983	4805	1483	0.23059313215400623	.	UUACGAAAUAUCUGAUGGCUGAUC	250	83	4009	27	40	159	487	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:595321-596514	Cluster_5817	Pocillopora_meandrina_HIv1___Sc0000022	595321	596514	1194	3307	953	0.7481100695494406	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	538	48	2950	14	145	61	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:601615-603554	Cluster_5818	Pocillopora_meandrina_HIv1___Sc0000022	601615	603554	1940	2284	1113	0.8918563922942206	+	UCCACGAUUCUUGCUGUCAGUUUUCACU	51	82	1989	29	30	55	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:603560-605304	Cluster_5819	Pocillopora_meandrina_HIv1___Sc0000022	603560	605304	1745	4234	1327	0.8993859234766178	+	UGUUUGUUGGUAGUUCUGGAUGAUUUCC	310	71	3895	24	36	92	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:609880-610281	Cluster_5820	Pocillopora_meandrina_HIv1___Sc0000022	609880	610281	402	149	93	0.9798657718120806	+	UACUGUCACAGAACUUGCACCUUGCCGUU	8	3	139	0	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:612083-612567	Cluster_5821	Pocillopora_meandrina_HIv1___Sc0000022	612083	612567	485	388	155	0.8994845360824743	+	UUAUUCACAAAUAUCUCCAAAUGUUCAA	51	7	357	5	3	2	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:613100-614026	Cluster_5822	Pocillopora_meandrina_HIv1___Sc0000022	613100	614026	927	2732	844	0.8554172767203514	+	UCUGCUUUAUCUAUUGUUUCUGUAAACU	259	64	2503	21	20	53	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:620315-621672	Cluster_5823	Pocillopora_meandrina_HIv1___Sc0000022	620315	621672	1358	1551	628	0.6118633139909736	.	UGUACUUCUCAAUAUUAAAAACUUCACU	89	28	1290	8	16	58	151	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:628300-628714	Cluster_5824	Pocillopora_meandrina_HIv1___Sc0000022	628300	628714	415	144	62	0.7986111111111112	.	UAAUUCUUAACGACUGUUCAUGUCCAUA	35	1	134	1	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:629958-630386	Cluster_5825	Pocillopora_meandrina_HIv1___Sc0000022	629958	630386	429	394	135	0.9543147208121827	+	UGCGACAAAGUACACCAUUUCUGAAGA	32	1	350	1	0	5	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:630924-631339	Cluster_5826	Pocillopora_meandrina_HIv1___Sc0000022	630924	631339	416	106	47	0.27358490566037735	.	GGGUUUCGUAUCUUGGACAUGUGGUCACA	31	5	72	1	6	17	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:635883-636299	Cluster_5827	Pocillopora_meandrina_HIv1___Sc0000022	635883	636299	417	115	58	0.034782608695652174	-	UCUUCUCGUGAUUUCCGUUUCCUUCUC	20	2	105	2	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:642188-642683	Cluster_5828	Pocillopora_meandrina_HIv1___Sc0000022	642188	642683	496	297	140	0.5084175084175084	.	AGCUUCAUGAUGAAAACACCAACAUUCUGA	22	4	267	1	2	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:670832-671259	Cluster_5829	Pocillopora_meandrina_HIv1___Sc0000022	670832	671259	428	159	81	0.9685534591194969	+	UGUAGUUAUCUCUUUCUCCAAUUUUAGG	33	3	150	0	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:672155-672579	Cluster_5830	Pocillopora_meandrina_HIv1___Sc0000022	672155	672579	425	115	45	0.9739130434782609	+	UAGCGAUAGAAAAUCUUAACAAUUAU	26	2	112	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:675440-675925	Cluster_5831	Pocillopora_meandrina_HIv1___Sc0000022	675440	675925	486	979	217	0.9846782431052093	+	UGUUCCAAUAUUUUUCGGUCGAGAUCCACU	213	14	911	43	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:676246-676915	Cluster_5832	Pocillopora_meandrina_HIv1___Sc0000022	676246	676915	670	2591	638	0.9540717869548437	+	UGAUAGCAACAAUGA	316	551	1916	13	12	40	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:680302-680730	Cluster_5833	Pocillopora_meandrina_HIv1___Sc0000022	680302	680730	429	246	67	0.9349593495934959	+	UUCUUUAGGUCUUGGCAUUCAUCAGCA	44	2	231	0	3	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:720458-721170	Cluster_5834	Pocillopora_meandrina_HIv1___Sc0000022	720458	721170	713	3723	708	0.9782433521353747	+	UGUGAUAUUCCGAACACUUGAAUGAGUCA	221	40	3507	17	14	47	98	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:736660-737892	Cluster_5835	Pocillopora_meandrina_HIv1___Sc0000022	736660	737892	1233	2663	647	0.9147577919639505	+	UGGGAUUACAUGUGGAAUUAUUUGACCGCU	132	54	2443	7	10	48	101	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:768014-768798	Cluster_5836	Pocillopora_meandrina_HIv1___Sc0000022	768014	768798	785	1422	403	0.8860759493670886	+	UGCUGUCUAGUUCCGACUAUCAUAAACUC	68	28	1315	1	6	15	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:775968-776448	Cluster_5837	Pocillopora_meandrina_HIv1___Sc0000022	775968	776448	481	3125	241	0.03424	-	UGUGACAGCUCUUUUCCUCCUGCAAAGA	625	46	2438	443	42	57	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:776499-776938	Cluster_5838	Pocillopora_meandrina_HIv1___Sc0000022	776499	776938	440	1256	237	0.01751592356687898	-	UACUGAACUUCUUCCAACCAGUGGAGAGA	254	20	1189	4	13	4	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:788297-788726	Cluster_5839	Pocillopora_meandrina_HIv1___Sc0000022	788297	788726	430	283	43	1.0	+	UGCAUUUCUAAUUCUGGUUUCGGUUACUCC	140	1	282	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:813610-814041	Cluster_5840	Pocillopora_meandrina_HIv1___Sc0000022	813610	814041	432	20691	259	0.0028031511285099803	-	UAACUUCAACUAGAUCGAAAUGCUCGUGA	14770	17	20592	1	2	2	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:836778-837204	Cluster_5841	Pocillopora_meandrina_HIv1___Sc0000022	836778	837204	427	188	125	0.851063829787234	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	14	1	173	1	2	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:837291-837705	Cluster_5842	Pocillopora_meandrina_HIv1___Sc0000022	837291	837705	415	313	207	0.9137380191693291	+	UCAGACACGUGGAUACUUGCGAUGAAGU	16	3	292	0	0	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:838065-838479	Cluster_5843	Pocillopora_meandrina_HIv1___Sc0000022	838065	838479	415	226	127	0.8893805309734514	+	UCUACGUCUAUCAACCAGGAAUGAAACUCGU	18	1	205	1	3	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:839221-839647	Cluster_5844	Pocillopora_meandrina_HIv1___Sc0000022	839221	839647	427	163	61	0.7484662576687117	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	23	1	136	1	0	1	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:844611-845312	Cluster_5845	Pocillopora_meandrina_HIv1___Sc0000022	844611	845312	702	267	145	0.9438202247191011	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	26	4	250	1	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:846542-846970	Cluster_5846	Pocillopora_meandrina_HIv1___Sc0000022	846542	846970	429	286	159	0.8216783216783217	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	23	2	257	1	1	5	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:879816-880281	Cluster_5847	Pocillopora_meandrina_HIv1___Sc0000022	879816	880281	466	340	163	0.17941176470588235	-	CGCGAUCUUCGGUUGCCUGA	17	240	32	43	13	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:978644-979058	Cluster_5848	Pocillopora_meandrina_HIv1___Sc0000022	978644	979058	415	310	16	1.0	+	GCCGCGAUAGCUCAA	166	310	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1097609-1098031	Cluster_5849	Pocillopora_meandrina_HIv1___Sc0000022	1097609	1098031	423	87	33	0.0	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUU	20	0	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1101425-1101852	Cluster_5850	Pocillopora_meandrina_HIv1___Sc0000022	1101425	1101852	428	173	60	0.09826589595375723	-	UGUAAUAAUCGUUUUGGGUAAUCUCAACA	56	3	157	0	3	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1103330-1103759	Cluster_5851	Pocillopora_meandrina_HIv1___Sc0000022	1103330	1103759	430	823	155	0.9586877278250304	+	UAGUAUAACUUUGAUCUGAUGAAAAUCAUC	293	1	804	1	5	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1209666-1210079	Cluster_5852	Pocillopora_meandrina_HIv1___Sc0000022	1209666	1210079	414	126	72	0.9761904761904762	+	UGCUCAUAUCUAAUAGAACUACUGCCGUU	15	1	122	0	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1339659-1340085	Cluster_5853	Pocillopora_meandrina_HIv1___Sc0000022	1339659	1340085	427	150	23	0.9933333333333333	+	UGUUGAACAAUCGUGUACGGUGUGGGA	83	0	144	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1443632-1444314	Cluster_5854	Pocillopora_meandrina_HIv1___Sc0000022	1443632	1444314	683	430	143	0.9534883720930233	+	AAAGAUCUGAAUUGACAAAUAGUGUACAGU	98	11	354	2	2	16	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1490221-1490638	Cluster_5855	Pocillopora_meandrina_HIv1___Sc0000022	1490221	1490638	418	280	191	0.9964285714285714	+	GAGCUAUUGAAAUUUUGACGAAAU	11	65	130	17	26	16	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1491419-1491833	Cluster_5856	Pocillopora_meandrina_HIv1___Sc0000022	1491419	1491833	415	93	15	0.043010752688172046	-	GUUGGAUCCGGCCCACA	55	84	9	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1654973-1655388	Cluster_5857	Pocillopora_meandrina_HIv1___Sc0000022	1654973	1655388	416	358	5	0.0	-	UUCCGAGGUCGCGGUG	347	358	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1757056-1757482	Cluster_5858	Pocillopora_meandrina_HIv1___Sc0000022	1757056	1757482	427	151	61	0.9536423841059603	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	42	3	140	0	1	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1877285-1878073	Cluster_5859	Pocillopora_meandrina_HIv1___Sc0000022	1877285	1878073	789	874	326	0.05263157894736842	-	UCCGUGACACAACGACUUUGCCUUGCUU	116	12	835	2	1	11	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1878243-1878679	Cluster_5860	Pocillopora_meandrina_HIv1___Sc0000022	1878243	1878679	437	428	205	0.1705607476635514	-	UAUGACGUUCCAGAAUCUUUGACAAAA	26	3	407	3	4	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1879213-1879642	Cluster_5861	Pocillopora_meandrina_HIv1___Sc0000022	1879213	1879642	430	138	46	0.0	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	20	0	136	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:1973582-1973996	Cluster_5862	Pocillopora_meandrina_HIv1___Sc0000022	1973582	1973996	415	101	22	0.06930693069306931	-	GAAGGAAUCGGCCGA	72	98	0	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2039814-2040242	Cluster_5863	Pocillopora_meandrina_HIv1___Sc0000022	2039814	2040242	429	304	57	0.7993421052631579	.	UGAUAUCAUAUUCUCUGUUUCCUCAUC	111	13	238	10	7	29	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2304232-2304647	Cluster_5864	Pocillopora_meandrina_HIv1___Sc0000022	2304232	2304647	416	98	10	0.0	-	GGGUAACUUUGGUGGA	70	98	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2722531-2722950	Cluster_5865	Pocillopora_meandrina_HIv1___Sc0000022	2722531	2722950	420	84	34	0.03571428571428571	-	UGAACUUGAACUAUUUGCUGGAGACGAAAG	18	1	80	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2724250-2724677	Cluster_5866	Pocillopora_meandrina_HIv1___Sc0000022	2724250	2724677	428	175	65	0.005714285714285714	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	27	2	168	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2864952-2865381	Cluster_5867	Pocillopora_meandrina_HIv1___Sc0000022	2864952	2865381	430	332	109	0.015060240963855422	-	UUUUCCGUGUUUUGGUAGUCCAAGUGAUC	38	2	325	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2866527-2867222	Cluster_5868	Pocillopora_meandrina_HIv1___Sc0000022	2866527	2867222	696	251	117	0.4541832669322709	.	UCCGAAAAAUGUCAACAGAGAACUGCUUG	29	5	240	4	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2931954-2932373	Cluster_5869	Pocillopora_meandrina_HIv1___Sc0000022	2931954	2932373	420	212	58	0.02358490566037736	-	CUCUGUCUCUGUCCGUGUCU	37	179	12	5	7	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:2937470-2937899	Cluster_5870	Pocillopora_meandrina_HIv1___Sc0000022	2937470	2937899	430	150	47	0.98	+	ACAUAUACCGGGUAUUUCUAAACACUGCUU	30	8	133	1	5	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3074527-3074941	Cluster_5871	Pocillopora_meandrina_HIv1___Sc0000022	3074527	3074941	415	91	14	0.0	-	GAUGGAUGGAGACGG	29	90	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3392153-3392705	Cluster_5872	Pocillopora_meandrina_HIv1___Sc0000022	3392153	3392705	553	601	414	0.0	-	GAAGGAGUUCGGUGGAGCUGUAGACA	9	197	226	41	59	41	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3440864-3441278	Cluster_5873	Pocillopora_meandrina_HIv1___Sc0000022	3440864	3441278	415	169	15	0.9526627218934911	+	CCGUGUUGUAGGCUC	128	164	3	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3645061-3645476	Cluster_5874	Pocillopora_meandrina_HIv1___Sc0000022	3645061	3645476	416	206	19	0.019417475728155338	-	AGUGUGUUCUUAACU	95	205	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:3774038-3774452	Cluster_5875	Pocillopora_meandrina_HIv1___Sc0000022	3774038	3774452	415	99	13	1.0	+	GCUUGGGCUGCCGGGGC	59	97	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4088218-4088633	Cluster_5876	Pocillopora_meandrina_HIv1___Sc0000022	4088218	4088633	416	521	43	0.9980806142034548	+	ACUGCUGCCGGUCGUC	383	502	15	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4272758-4273191	Cluster_5877	Pocillopora_meandrina_HIv1___Sc0000022	4272758	4273191	434	433	64	0.006928406466512702	-	UGAUUUGUGACUGCUGUUGUUGCAUGGC	179	4	426	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4274319-4274899	Cluster_5878	Pocillopora_meandrina_HIv1___Sc0000022	4274319	4274899	581	589	242	0.7283531409168081	.	UCAAAAUCUUCGUAAUUCUGGUAAGGA	42	9	522	8	5	21	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4311659-4312086	Cluster_5879	Pocillopora_meandrina_HIv1___Sc0000022	4311659	4312086	428	92	28	0.9130434782608695	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	47	0	86	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4315335-4315931	Cluster_5880	Pocillopora_meandrina_HIv1___Sc0000022	4315335	4315931	597	5553	504	0.0032414910858995136	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	843	14	5486	3	10	12	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4334556-4334977	Cluster_5881	Pocillopora_meandrina_HIv1___Sc0000022	4334556	4334977	422	225	21	0.9866666666666667	+	UCUGACGAAGGGCUGACGCUCA	181	5	1	9	197	10	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4355422-4355839	Cluster_5882	Pocillopora_meandrina_HIv1___Sc0000022	4355422	4355839	418	117	11	0.0	-	CGGCUUGAAAAAAAAAAA	39	117	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4404045-4404461	Cluster_5883	Pocillopora_meandrina_HIv1___Sc0000022	4404045	4404461	417	1086	10	0.0	-	AAGUGUGCUCUUAACUA	1049	1086	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4451644-4452060	Cluster_5884	Pocillopora_meandrina_HIv1___Sc0000022	4451644	4452060	417	424	12	0.0023584905660377358	-	GAGUGCGCUCUUAACUA	292	424	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4496866-4497284	Cluster_5885	Pocillopora_meandrina_HIv1___Sc0000022	4496866	4497284	419	831	12	0.9987966305655837	+	AUGGACUAUGAUUUUUU	270	831	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4641549-4641973	Cluster_5886	Pocillopora_meandrina_HIv1___Sc0000022	4641549	4641973	425	96	31	0.9583333333333334	+	UGUGUAGAUAUGUCUUUUGGACAGGA	34	2	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4679819-4680359	Cluster_5887	Pocillopora_meandrina_HIv1___Sc0000022	4679819	4680359	541	499	171	0.49899799599198397	.	AUGAGAUUCAUGAAUGGAGACAACC	50	10	441	2	10	5	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4681239-4681674	Cluster_5888	Pocillopora_meandrina_HIv1___Sc0000022	4681239	4681674	436	500	117	1.0	+	UGUAAGACUGACAAAGGCUAAGGUGAACAGC	117	6	470	2	3	6	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4694362-4694777	Cluster_5889	Pocillopora_meandrina_HIv1___Sc0000022	4694362	4694777	416	79	17	1.0	+	UCCCACUCCUGACACCA	24	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4773435-4774094	Cluster_5890	Pocillopora_meandrina_HIv1___Sc0000022	4773435	4774094	660	628	124	0.9585987261146497	+	AUGGGUCUUAUUGAGCAUUACAGA	97	6	471	3	8	13	127	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4809610-4810026	Cluster_5891	Pocillopora_meandrina_HIv1___Sc0000022	4809610	4810026	417	112	14	0.9553571428571429	+	GACGGAUUGAGGAAGCA	86	104	7	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4949269-4950124	Cluster_5892	Pocillopora_meandrina_HIv1___Sc0000022	4949269	4950124	856	672	328	0.3482142857142857	.	UGCUGUAUCAUCUGAAAACAAAGAAUGC	35	8	589	12	5	14	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:4995172-4995791	Cluster_5893	Pocillopora_meandrina_HIv1___Sc0000022	4995172	4995791	620	20853	2824	0.0009590946146837385	-	CCUCUGAGCGCGAAGCACGUUGCC	1244	6326	6424	1618	2367	1670	2448	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5033872-5034408	Cluster_5894	Pocillopora_meandrina_HIv1___Sc0000022	5033872	5034408	537	1085	331	1.0	+	CAGUUCUGUGACAGUC	70	411	404	114	61	69	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5073836-5074251	Cluster_5895	Pocillopora_meandrina_HIv1___Sc0000022	5073836	5074251	416	143	7	0.986013986013986	+	GAGUGUGCUCUUAGCC	97	142	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5113155-5113580	Cluster_5896	Pocillopora_meandrina_HIv1___Sc0000022	5113155	5113580	426	99	38	0.010101010101010102	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	1	98	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5232770-5233198	Cluster_5897	Pocillopora_meandrina_HIv1___Sc0000022	5232770	5233198	429	102	30	0.9705882352941176	+	AACUGAAGAACCGAUCUCUAAAAUUGAUU	44	1	96	2	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5310368-5310789	Cluster_5898	Pocillopora_meandrina_HIv1___Sc0000022	5310368	5310789	422	170	16	1.0	+	UCUGACGAAGGGCUGACGCUCA	131	10	0	9	144	7	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5319088-5319516	Cluster_5899	Pocillopora_meandrina_HIv1___Sc0000022	5319088	5319516	429	167	73	0.9221556886227545	+	UCGAUGUUACUGUCCGUUCUCCGUUGA	36	3	154	1	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5625640-5626072	Cluster_5900	Pocillopora_meandrina_HIv1___Sc0000022	5625640	5626072	433	351	111	0.9743589743589743	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	44	10	320	2	6	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5637573-5637993	Cluster_5901	Pocillopora_meandrina_HIv1___Sc0000022	5637573	5637993	421	231	30	0.0	-	GUGAUAGAUCUUUUGGAGACGA	49	165	0	16	49	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5787456-5787885	Cluster_5902	Pocillopora_meandrina_HIv1___Sc0000022	5787456	5787885	430	591	129	0.9949238578680203	+	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	130	3	581	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5788006-5788536	Cluster_5903	Pocillopora_meandrina_HIv1___Sc0000022	5788006	5788536	531	593	236	0.984822934232715	+	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	32	4	579	3	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5790680-5791105	Cluster_5904	Pocillopora_meandrina_HIv1___Sc0000022	5790680	5791105	426	132	65	0.9772727272727273	+	UGUGAGUUAUGUGACCCUGAACAGCGGU	28	0	123	2	0	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:5984962-5985377	Cluster_5905	Pocillopora_meandrina_HIv1___Sc0000022	5984962	5985377	416	683	13	0.01171303074670571	-	CGGCUUGAAAAAAAAA	488	677	4	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000022:6057719-6058222	Cluster_5906	Pocillopora_meandrina_HIv1___Sc0000022	6057719	6058222	504	2025	416	0.0009876543209876543	-	GAAGGAUGAUGACCUAAAAGGCC	182	392	486	134	352	484	177	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3659-5396	Cluster_5907	Pocillopora_meandrina_HIv1___Sc0000023	3659	5396	1738	2699	1091	0.04038532789922193	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	84	26	2558	9	24	40	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:132586-133142	Cluster_5908	Pocillopora_meandrina_HIv1___Sc0000023	132586	133142	557	538	202	0.0	-	GAAUUUUGCAGGCUCAUACAACU	45	130	235	30	45	69	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:134704-135255	Cluster_5909	Pocillopora_meandrina_HIv1___Sc0000023	134704	135255	552	1909	435	0.001571503404924044	-	GCUUACUGCCAGACUACAGAC	201	620	673	343	94	117	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:288293-288718	Cluster_5910	Pocillopora_meandrina_HIv1___Sc0000023	288293	288718	426	125	31	0.984	+	UUUGACUGUAUUUUUUAUUCCUA	29	2	87	2	1	33	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:542562-542976	Cluster_5911	Pocillopora_meandrina_HIv1___Sc0000023	542562	542976	415	117	5	0.0	-	UCAGGGAUUGUGGUA	110	117	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:613556-613981	Cluster_5912	Pocillopora_meandrina_HIv1___Sc0000023	613556	613981	426	120	53	0.016666666666666666	-	ACGAUCACGUCGAACUGUAUGGCAGCUAGC	18	4	111	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:622107-622951	Cluster_5913	Pocillopora_meandrina_HIv1___Sc0000023	622107	622951	845	733	271	0.2742155525238745	.	AAAAGUAACAAGUAUUGGGGAUUCAAUC	54	9	640	10	3	19	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:662022-662449	Cluster_5914	Pocillopora_meandrina_HIv1___Sc0000023	662022	662449	428	243	92	0.25925925925925924	.	UAGGACAAUUAGCAUUACAGCAGCUUA	24	1	217	4	8	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:723792-724220	Cluster_5915	Pocillopora_meandrina_HIv1___Sc0000023	723792	724220	429	135	31	0.9851851851851852	+	UGUUAAUCGAGAGAAGCAUAGACGCAAAUC	58	0	135	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:754024-754453	Cluster_5916	Pocillopora_meandrina_HIv1___Sc0000023	754024	754453	430	350	39	1.0	+	UUCCAUGACUCUGUUUAAACGAAAACGAAC	223	1	346	2	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:757105-757624	Cluster_5917	Pocillopora_meandrina_HIv1___Sc0000023	757105	757624	520	4724	300	0.9953429297205758	+	UGUUAUUUGUGUCUAAUGUUGUCGAACAC	929	14	4667	7	9	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:757806-758231	Cluster_5918	Pocillopora_meandrina_HIv1___Sc0000023	757806	758231	426	201	109	0.13432835820895522	-	UGAGGAAUCGAGAUGGCUAGCUGUGUU	32	22	142	8	8	8	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:758300-758730	Cluster_5919	Pocillopora_meandrina_HIv1___Sc0000023	758300	758730	431	655	58	0.0061068702290076335	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	248	0	654	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:765065-766077	Cluster_5920	Pocillopora_meandrina_HIv1___Sc0000023	765065	766077	1013	2902	435	0.9627842866988284	+	UCGGAUCUUUCACCUCAUGAGCAGCGAGA	858	14	2839	3	1	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:938847-939261	Cluster_5921	Pocillopora_meandrina_HIv1___Sc0000023	938847	939261	415	92	11	1.0	+	CAAGUGUGCUCUUAACUA	23	90	0	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1061848-1062274	Cluster_5922	Pocillopora_meandrina_HIv1___Sc0000023	1061848	1062274	427	199	25	0.9698492462311558	+	UGGUAAAAUUCUGUUCAAAGUAGGUGC	161	5	192	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1084399-1084814	Cluster_5923	Pocillopora_meandrina_HIv1___Sc0000023	1084399	1084814	416	106	12	1.0	+	CAAGUGUGCUCUUAACUA	26	106	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1539199-1539697	Cluster_5924	Pocillopora_meandrina_HIv1___Sc0000023	1539199	1539697	499	382	199	0.020942408376963352	-	AAGACAACGACACAUUUGUGCAUUC	36	90	167	37	16	26	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1594033-1594461	Cluster_5925	Pocillopora_meandrina_HIv1___Sc0000023	1594033	1594461	429	91	19	0.0	-	CUCAUGUACAGCAGAACUUGUUGAAUCUG	53	3	86	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1635912-1636355	Cluster_5926	Pocillopora_meandrina_HIv1___Sc0000023	1635912	1636355	444	1009	182	1.0	+	UUCCUCUCUGAGCUUACCACAGUCAUGUGAU	218	188	600	75	16	67	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1636538-1636961	Cluster_5927	Pocillopora_meandrina_HIv1___Sc0000023	1636538	1636961	424	138	74	0.9492753623188406	+	AUGUGGAUUAUUUGGUUUAUGAUA	24	20	64	5	4	12	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1648832-1649372	Cluster_5928	Pocillopora_meandrina_HIv1___Sc0000023	1648832	1649372	541	3769	896	0.9997346776333245	+	ACCCAAAGUGUCAAAUUCCUGGAUA	393	729	1879	516	174	215	256	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1653651-1654082	Cluster_5929	Pocillopora_meandrina_HIv1___Sc0000023	1653651	1654082	432	502	153	1.0	+	ACUAUGUUGAUAUUAGGACGGCAUGAGGUUG	64	193	253	9	12	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1661773-1662195	Cluster_5930	Pocillopora_meandrina_HIv1___Sc0000023	1661773	1662195	423	122	53	1.0	+	AUGUGGAUUAUUUGGUUUAUGAUA	16	6	62	6	12	17	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1887619-1888048	Cluster_5931	Pocillopora_meandrina_HIv1___Sc0000023	1887619	1888048	430	194	76	0.005154639175257732	-	AACGUGUCACUUGCGAAGAAAUCUGAAGU	23	4	185	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:1889295-1889722	Cluster_5932	Pocillopora_meandrina_HIv1___Sc0000023	1889295	1889722	428	184	78	0.9782608695652174	+	UGAACCGUGCCGAUCUGCUGCCCUUUGAC	36	0	178	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2039299-2039724	Cluster_5933	Pocillopora_meandrina_HIv1___Sc0000023	2039299	2039724	426	96	29	0.010416666666666666	-	UGUGUAGAUAUGUCUUUUGGACAGGA	38	0	95	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2092559-2092986	Cluster_5934	Pocillopora_meandrina_HIv1___Sc0000023	2092559	2092986	428	116	27	0.034482758620689655	-	UCUACAUAAUCUCUUUCUGCAUCACUGAAG	51	5	110	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2332953-2333368	Cluster_5935	Pocillopora_meandrina_HIv1___Sc0000023	2332953	2333368	416	95	7	0.010526315789473684	-	GUAGGCUGCUGUGAGC	72	95	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2508726-2509156	Cluster_5936	Pocillopora_meandrina_HIv1___Sc0000023	2508726	2509156	431	139	31	0.007194244604316547	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	56	0	139	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2562485-2562913	Cluster_5937	Pocillopora_meandrina_HIv1___Sc0000023	2562485	2562913	429	140	58	1.0	+	UGCUUCUAACUCGGGCUGUCUGCCACAGUGG	29	4	134	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2586871-2587290	Cluster_5938	Pocillopora_meandrina_HIv1___Sc0000023	2586871	2587290	420	1279	35	1.0	+	CUUUCUGGAGUUAAGGAU	491	1274	0	5	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2620430-2620844	Cluster_5939	Pocillopora_meandrina_HIv1___Sc0000023	2620430	2620844	415	84	12	0.0	-	GAUUUGGAUGGAGCUU	26	84	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2665435-2666773	Cluster_5940	Pocillopora_meandrina_HIv1___Sc0000023	2665435	2666773	1339	3093	248	0.9935337859683155	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	1635	13	3039	4	5	7	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2667925-2668655	Cluster_5941	Pocillopora_meandrina_HIv1___Sc0000023	2667925	2668655	731	340	130	0.45588235294117646	.	CUUGUCUUCGAUCGACAGAGUCAUGUAGU	28	23	245	19	6	8	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2752938-2754132	Cluster_5942	Pocillopora_meandrina_HIv1___Sc0000023	2752938	2754132	1195	3102	860	0.25209542230818827	.	UGCAGACUCUCGACGAAUUAUUAGGUUG	537	37	2779	14	144	53	75	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2755547-2757529	Cluster_5943	Pocillopora_meandrina_HIv1___Sc0000023	2755547	2757529	1983	4658	1471	0.7816659510519536	.	UUACGAAAUAUCUGAUGGCUGAUC	254	79	3878	35	41	138	487	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2850001-2850429	Cluster_5944	Pocillopora_meandrina_HIv1___Sc0000023	2850001	2850429	429	155	40	0.9806451612903225	+	UGCUUUAGUCACAGACUUUGCACCUGAAA	56	8	144	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:2851851-2852313	Cluster_5945	Pocillopora_meandrina_HIv1___Sc0000023	2851851	2852313	463	406	123	0.7733990147783252	.	UUUAUGCGGUCUUUGAUGCCGAGAAGUCUGC	73	20	370	1	2	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3040453-3040893	Cluster_5946	Pocillopora_meandrina_HIv1___Sc0000023	3040453	3040893	441	1619	107	0.8801729462631254	+	UGAAUCCGCUUUGCAGCAUAAAUGAGC	955	11	1416	11	3	17	161	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3041761-3042170	Cluster_5947	Pocillopora_meandrina_HIv1___Sc0000023	3041761	3042170	410	154	83	0.6038961038961039	.	UGGAAUCAUGCCUUGCAUCUGUUAUAACAC	11	1	112	0	2	26	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3042931-3043511	Cluster_5948	Pocillopora_meandrina_HIv1___Sc0000023	3042931	3043511	581	284	123	0.897887323943662	+	UGAUAAGCUCAGAUCGCUCGAUGUCAGU	34	7	267	2	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3062450-3062972	Cluster_5949	Pocillopora_meandrina_HIv1___Sc0000023	3062450	3062972	523	4910	495	0.9319755600814664	+	UAUGUUGAACGAGAACUGAGGACCUCGAUC	781	39	4691	11	22	87	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3120578-3121006	Cluster_5950	Pocillopora_meandrina_HIv1___Sc0000023	3120578	3121006	429	1369	71	0.9992695398100804	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	928	3	1364	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3121387-3121812	Cluster_5951	Pocillopora_meandrina_HIv1___Sc0000023	3121387	3121812	426	172	62	0.38372093023255816	.	UCUGCAUGAAGAACAGACCACCUGAUGA	17	2	161	3	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3123006-3123575	Cluster_5952	Pocillopora_meandrina_HIv1___Sc0000023	3123006	3123575	570	1194	223	0.8525963149078727	+	UGAUAAGCUCAGAUCGCUCGAUGUCAGU	276	14	1138	8	7	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3142922-3143504	Cluster_5953	Pocillopora_meandrina_HIv1___Sc0000023	3142922	3143504	583	1754	353	0.7052451539338654	.	UGAUAAGCUCAGAUCGCUCGAUGUCAGUCA	193	21	1612	18	15	21	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3160642-3161069	Cluster_5954	Pocillopora_meandrina_HIv1___Sc0000023	3160642	3161069	428	199	88	0.8693467336683417	+	UGAUGCCGAGAAGUCUGCUCUCCUGAGU	33	6	185	0	3	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3235979-3236404	Cluster_5955	Pocillopora_meandrina_HIv1___Sc0000023	3235979	3236404	426	109	38	0.8440366972477065	+	UGCUUUAGUCACAGACUUUGCACCUGAAA	31	2	103	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3237033-3237462	Cluster_5956	Pocillopora_meandrina_HIv1___Sc0000023	3237033	3237462	430	693	203	0.9826839826839827	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	170	3	672	1	3	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3237511-3238230	Cluster_5957	Pocillopora_meandrina_HIv1___Sc0000023	3237511	3238230	720	506	268	0.9486166007905138	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	22	20	449	2	2	5	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3239517-3239952	Cluster_5958	Pocillopora_meandrina_HIv1___Sc0000023	3239517	3239952	436	247	96	0.9635627530364372	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	39	2	232	0	0	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3240038-3240459	Cluster_5959	Pocillopora_meandrina_HIv1___Sc0000023	3240038	3240459	422	259	158	0.9111969111969112	+	UAAACUCCUGAACAUCUUGUUCUACAUU	18	0	248	1	0	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3240562-3240979	Cluster_5960	Pocillopora_meandrina_HIv1___Sc0000023	3240562	3240979	418	279	166	0.8530465949820788	+	UGACUCACCGACCUCCUGUACUCUCUGA	11	8	237	3	0	6	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3309346-3309773	Cluster_5961	Pocillopora_meandrina_HIv1___Sc0000023	3309346	3309773	428	266	124	0.5451127819548872	.	UGCAUUCUUUGUGGCGUACGUUCUGCUU	29	3	251	3	0	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3394591-3395020	Cluster_5962	Pocillopora_meandrina_HIv1___Sc0000023	3394591	3395020	430	219	49	0.0136986301369863	-	GCUUGGUUGAUAUUUGUACAAAAUUGAAAUA	60	3	212	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3409028-3409442	Cluster_5963	Pocillopora_meandrina_HIv1___Sc0000023	3409028	3409442	415	147	77	0.034013605442176874	-	UUGGACGUAGAUGUUUGUUUACAUCGGG	17	0	141	2	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3436895-3437312	Cluster_5964	Pocillopora_meandrina_HIv1___Sc0000023	3436895	3437312	418	210	4	1.0	+	UGGCCUGAAAAAAAAAAA	166	210	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3471903-3472332	Cluster_5965	Pocillopora_meandrina_HIv1___Sc0000023	3471903	3472332	430	336	92	0.6964285714285714	.	UGAAGUAAGCACCCUGGUCUCUGCCAAG	74	3	320	0	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3700810-3701236	Cluster_5966	Pocillopora_meandrina_HIv1___Sc0000023	3700810	3701236	427	201	84	0.12437810945273632	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	38	2	183	2	3	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3723474-3723972	Cluster_5967	Pocillopora_meandrina_HIv1___Sc0000023	3723474	3723972	499	4550	330	0.9934065934065934	+	UGCUUCUCGAUUCACAUUUUCAUUCUGC	1086	18	4501	7	6	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3791717-3792146	Cluster_5968	Pocillopora_meandrina_HIv1___Sc0000023	3791717	3792146	430	302	136	0.1423841059602649	-	UGUACCAUCUGACCUUGCCAAAAUUCGAGC	33	19	262	4	4	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3830315-3830718	Cluster_5969	Pocillopora_meandrina_HIv1___Sc0000023	3830315	3830718	404	135	60	0.8592592592592593	+	UGAAAAACUGUGACCA	43	100	7	15	8	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3933279-3934530	Cluster_5970	Pocillopora_meandrina_HIv1___Sc0000023	3933279	3934530	1252	1046	470	0.6443594646271511	.	UUGGAUUGUAAUAAGGUACAAGAGGCUG	36	14	822	11	23	115	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3936607-3937027	Cluster_5971	Pocillopora_meandrina_HIv1___Sc0000023	3936607	3937027	421	175	80	0.10285714285714286	-	UCAGUGAUCAUGGAAAUUUCG	17	6	101	30	3	32	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3938981-3939424	Cluster_5972	Pocillopora_meandrina_HIv1___Sc0000023	3938981	3939424	444	198	51	0.25757575757575757	.	UAAAGAGGACUGAUAAUCUCAGGUUAUC	42	3	149	0	4	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:3939486-3939910	Cluster_5973	Pocillopora_meandrina_HIv1___Sc0000023	3939486	3939910	425	184	55	0.016304347826086956	-	UGCCGUGGAAAGGUUAAUCUCGAGG	41	3	125	1	13	13	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4040027-4040515	Cluster_5974	Pocillopora_meandrina_HIv1___Sc0000023	4040027	4040515	489	216	99	0.7916666666666666	.	UGUAAGACGCACUCUACUCUGUUGU	33	28	170	6	1	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4040697-4041185	Cluster_5975	Pocillopora_meandrina_HIv1___Sc0000023	4040697	4041185	489	1930	166	0.12072538860103627	-	UUAACUCCACGGUGCCAAUGACUUUCUU	476	20	1839	9	10	21	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4042476-4042969	Cluster_5976	Pocillopora_meandrina_HIv1___Sc0000023	4042476	4042969	494	292	132	0.8767123287671232	+	UUGGAACGUGUUGCUGAACGCUUGCUA	37	18	251	4	6	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4071655-4072059	Cluster_5977	Pocillopora_meandrina_HIv1___Sc0000023	4071655	4072059	405	88	44	0.9545454545454546	+	UGAUUACACUGUCAAAAAUUCCUGCGAA	18	4	79	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4152717-4153133	Cluster_5978	Pocillopora_meandrina_HIv1___Sc0000023	4152717	4153133	417	291	18	1.0	+	UCCCUGCUGCUGUAUGU	77	286	3	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4326953-4327367	Cluster_5979	Pocillopora_meandrina_HIv1___Sc0000023	4326953	4327367	415	293	13	0.0034129692832764505	-	GGUUGGAUCCGGCCG	271	293	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4466900-4467330	Cluster_5980	Pocillopora_meandrina_HIv1___Sc0000023	4466900	4467330	431	673	73	0.008915304606240713	-	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	225	0	662	0	1	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4544171-4544592	Cluster_5981	Pocillopora_meandrina_HIv1___Sc0000023	4544171	4544592	422	86	6	0.9767441860465116	+	UCUGACGAAGGGCUGACACUCG	80	0	1	1	83	1	0	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4579509-4579936	Cluster_5982	Pocillopora_meandrina_HIv1___Sc0000023	4579509	4579936	428	94	33	0.0425531914893617	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	31	1	91	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4681114-4681542	Cluster_5983	Pocillopora_meandrina_HIv1___Sc0000023	4681114	4681542	429	213	38	1.0	+	CGCGGAAAGAGGGGAAAUUGCACUCUCCC	34	22	167	4	2	1	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4714493-4714932	Cluster_5984	Pocillopora_meandrina_HIv1___Sc0000023	4714493	4714932	440	305	159	0.9934426229508196	+	AGAUUGAACCACCCAUAGGCUGAUA	23	71	173	17	12	15	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4716503-4716988	Cluster_5985	Pocillopora_meandrina_HIv1___Sc0000023	4716503	4716988	486	826	270	0.9963680387409201	+	AGAAAUGAUGACAGAAU	75	393	341	31	18	15	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4794386-4794809	Cluster_5986	Pocillopora_meandrina_HIv1___Sc0000023	4794386	4794809	424	25908	211	3.85981164119191e-05	-	UGUCUGUGAGAAUUUAGCUCGU	13246	2199	24	288	21114	2018	265	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:4966723-4967139	Cluster_5987	Pocillopora_meandrina_HIv1___Sc0000023	4966723	4967139	417	149	14	0.013422818791946308	-	AUGCAAGUCGAACGGUA	66	147	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5048164-5049133	Cluster_5988	Pocillopora_meandrina_HIv1___Sc0000023	5048164	5049133	970	783	316	0.8109833971902938	+	UGUGUAUAUUAUUCAGGUCAGAUUGAAA	113	23	695	4	9	15	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5063418-5063846	Cluster_5989	Pocillopora_meandrina_HIv1___Sc0000023	5063418	5063846	429	180	53	0.005555555555555556	-	UGUUAAUCGAGAGAAGCAUAGACGCAAAUC	56	1	172	3	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5256083-5256502	Cluster_5990	Pocillopora_meandrina_HIv1___Sc0000023	5256083	5256502	420	214	19	1.0	+	AUUGUGGUUUUGAUCUUUUU	72	189	0	24	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5493397-5493824	Cluster_5991	Pocillopora_meandrina_HIv1___Sc0000023	5493397	5493824	428	190	58	1.0	+	UCUUGAAGCCUUGUCAGCUGGUCUGCCU	25	12	176	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5719271-5720758	Cluster_5992	Pocillopora_meandrina_HIv1___Sc0000023	5719271	5720758	1488	8006	1960	0.2183362478141394	.	UGCAGUGAAUGGAGAGAUCUGACAUCAGUC	676	151	6846	59	48	287	615	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5720774-5721819	Cluster_5993	Pocillopora_meandrina_HIv1___Sc0000023	5720774	5721819	1046	2517	762	0.06158124751688518	-	UUAGUCGAAAUGCAUCCUCAGUAAAUGC	272	62	2331	20	25	36	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000023:5721886-5722294	Cluster_5994	Pocillopora_meandrina_HIv1___Sc0000023	5721886	5722294	409	115	73	0.034782608695652174	-	UAUAUCACUGGAAAGCUUAUGAACUAUA	8	3	99	1	5	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:147469-147898	Cluster_5995	Pocillopora_meandrina_HIv1___Sc0000024	147469	147898	430	1202	22	0.9941763727121464	+	UGUGAUGUAGAUUGCAACAUUUCGACUGC	510	4	1190	3	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:210383-212120	Cluster_5996	Pocillopora_meandrina_HIv1___Sc0000024	210383	212120	1738	2500	1011	0.0408	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	99	17	2378	7	19	38	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:467363-467770	Cluster_5997	Pocillopora_meandrina_HIv1___Sc0000024	467363	467770	408	75	33	0.013333333333333334	-	UGUGUAGAUAUGUCUUUUGGACAGGA	22	1	73	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:704434-704953	Cluster_5998	Pocillopora_meandrina_HIv1___Sc0000024	704434	704953	520	1503	345	0.07451763140385895	-	UCCUCGCUAAGAAUUCUUAUUUCGUCG	175	16	1382	18	30	19	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:705080-706057	Cluster_5999	Pocillopora_meandrina_HIv1___Sc0000024	705080	706057	978	1088	404	0.6930147058823529	.	UAACUUCUUGGCUGAUUUAAAAUUUAUGUC	59	8	1023	2	5	22	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:776195-776622	Cluster_6000	Pocillopora_meandrina_HIv1___Sc0000024	776195	776622	428	166	65	0.9939759036144579	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	31	9	151	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:778552-778961	Cluster_6001	Pocillopora_meandrina_HIv1___Sc0000024	778552	778961	410	134	71	0.8507462686567164	+	UGGUUAUGUAAAUGAGGUUUCCUGUGAAGG	23	3	123	1	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:956651-957078	Cluster_6002	Pocillopora_meandrina_HIv1___Sc0000024	956651	957078	428	131	31	0.0	-	UGCUCAAUGUCCAGGACUCUCUCUGAGUAG	31	0	131	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1007371-1007818	Cluster_6003	Pocillopora_meandrina_HIv1___Sc0000024	1007371	1007818	448	415	106	0.5542168674698795	.	AUAGCUCGAACGAGGACUCGUCCUUAACA	77	4	353	2	3	13	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1008128-1008555	Cluster_6004	Pocillopora_meandrina_HIv1___Sc0000024	1008128	1008555	428	201	36	0.004975124378109453	-	UGGUAAACUUCCCUAACAUUGGCCUGUG	48	0	200	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1010264-1010698	Cluster_6005	Pocillopora_meandrina_HIv1___Sc0000024	1010264	1010698	435	4468	290	0.006714413607878245	-	UUGUUUACCUCUUGUCGUCUCUUAGUUUG	937	40	4366	3	18	32	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1010709-1011221	Cluster_6006	Pocillopora_meandrina_HIv1___Sc0000024	1010709	1011221	513	966	285	0.08178053830227744	-	UUCUUCUUUGGCCUCUCUGAGUCUGAGC	99	15	918	1	3	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1094343-1094767	Cluster_6007	Pocillopora_meandrina_HIv1___Sc0000024	1094343	1094767	425	88	26	0.0	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	0	87	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1592893-1593986	Cluster_6008	Pocillopora_meandrina_HIv1___Sc0000024	1592893	1593986	1094	1222	445	0.9787234042553191	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	100	10	1180	2	2	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1594021-1594711	Cluster_6009	Pocillopora_meandrina_HIv1___Sc0000024	1594021	1594711	691	361	194	0.9529085872576177	+	UGGGAAUCCGAAUCGUGGUACAAAGUCA	19	6	332	6	2	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1596081-1597118	Cluster_6010	Pocillopora_meandrina_HIv1___Sc0000024	1596081	1597118	1038	889	356	0.9550056242969629	+	UAACAUCUCUCUUUCCGACUUUAACAGC	52	13	841	4	7	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1597181-1598249	Cluster_6011	Pocillopora_meandrina_HIv1___Sc0000024	1597181	1598249	1069	1351	527	0.9393042190969653	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	105	15	1280	5	4	15	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1598368-1598862	Cluster_6012	Pocillopora_meandrina_HIv1___Sc0000024	1598368	1598862	495	469	276	0.8081023454157783	+	GGAAGAAUUAGAUAAUGAGAAGCU	12	4	413	3	8	4	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1737905-1738332	Cluster_6013	Pocillopora_meandrina_HIv1___Sc0000024	1737905	1738332	428	119	8	0.008403361344537815	-	UAACCCGAGAACUGACACGUGAGUAGUC	72	21	91	0	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1742427-1742854	Cluster_6014	Pocillopora_meandrina_HIv1___Sc0000024	1742427	1742854	428	100	11	0.01	-	UAACCCGAGAACUGACACGUGAGUAGUC	70	0	90	0	0	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1971890-1972315	Cluster_6015	Pocillopora_meandrina_HIv1___Sc0000024	1971890	1972315	426	185	68	0.9783783783783784	+	UCUCUGUUGUCUUAAUUAUUGCUAGAAC	31	1	177	1	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1972818-1973250	Cluster_6016	Pocillopora_meandrina_HIv1___Sc0000024	1972818	1973250	433	696	174	0.889367816091954	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	98	2	668	0	9	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1975327-1975861	Cluster_6017	Pocillopora_meandrina_HIv1___Sc0000024	1975327	1975861	535	648	137	0.9737654320987654	+	UCAGACUGUGCAUAACCAUUUGCAAACG	86	4	599	0	12	13	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:1988581-1989093	Cluster_6018	Pocillopora_meandrina_HIv1___Sc0000024	1988581	1989093	513	3033	185	0.9212001318826245	+	UUGUCUAGUAUUGACCUUGUGACUUGUGC	1418	14	2999	9	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2043031-2044270	Cluster_6019	Pocillopora_meandrina_HIv1___Sc0000024	2043031	2044270	1240	5621	1214	0.19053549190535493	-	UCUCCAGGAUUUAAAUACUCGAAAAUGG	367	64	5122	14	23	78	320	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2122924-2124411	Cluster_6020	Pocillopora_meandrina_HIv1___Sc0000024	2122924	2124411	1488	10598	2107	0.05265144366861672	-	UCGACGAUCUUAAAAUCCUUUCCUUCUU	750	182	9903	60	48	166	239	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2126407-2126823	Cluster_6021	Pocillopora_meandrina_HIv1___Sc0000024	2126407	2126823	417	144	14	0.9930555555555556	+	UAGUGUGCUCUUAACGG	70	144	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2257156-2257583	Cluster_6022	Pocillopora_meandrina_HIv1___Sc0000024	2257156	2257583	428	212	86	0.02358490566037736	-	UUACUUCUGAUAUAUGACUGUUCCAGGU	32	6	200	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2388554-2388980	Cluster_6023	Pocillopora_meandrina_HIv1___Sc0000024	2388554	2388980	427	111	26	0.9819819819819819	+	UGAACUACUGCUCGUACUCUAGAUAUG	33	4	105	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2467312-2467738	Cluster_6024	Pocillopora_meandrina_HIv1___Sc0000024	2467312	2467738	427	167	92	0.11377245508982035	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUG	17	3	161	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2584993-2585605	Cluster_6025	Pocillopora_meandrina_HIv1___Sc0000024	2584993	2585605	613	868	146	0.05184331797235023	-	UGGUAAAAUUCUGUUCAAAGUAGGUGU	155	7	778	69	2	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2627559-2627975	Cluster_6026	Pocillopora_meandrina_HIv1___Sc0000024	2627559	2627975	417	99	23	0.98989898989899	+	AUCCCACUUCUGACACCA	34	91	7	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2629691-2630637	Cluster_6027	Pocillopora_meandrina_HIv1___Sc0000024	2629691	2630637	947	745	204	0.07516778523489932	-	UGUGACAGCUCUUUUCCUCCUGCAAAGAAG	86	24	685	10	3	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2645965-2646399	Cluster_6028	Pocillopora_meandrina_HIv1___Sc0000024	2645965	2646399	435	256	85	0.7109375	.	UCUGACCAAUUAAUUAUUUUCUGUACCACA	51	2	188	1	1	20	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2695960-2697393	Cluster_6029	Pocillopora_meandrina_HIv1___Sc0000024	2695960	2697393	1434	14854	2702	0.7408105560791706	.	UCUUGGUACUGAAUUUGUUUAUCGGCGU	556	154	13536	88	125	408	543	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2852508-2853971	Cluster_6030	Pocillopora_meandrina_HIv1___Sc0000024	2852508	2853971	1464	10705	1211	0.09378794955628211	-	UGCAGAUUGCCCUGACACGAAAUAUCGUC	1959	119	9693	242	172	228	251	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2856088-2856516	Cluster_6031	Pocillopora_meandrina_HIv1___Sc0000024	2856088	2856516	429	464	111	0.01939655172413793	-	UGUAGAAUCAAUCUGUUACUAAGACACC	115	3	441	14	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2868577-2869002	Cluster_6032	Pocillopora_meandrina_HIv1___Sc0000024	2868577	2869002	426	248	111	0.24193548387096775	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	31	9	221	2	4	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2872254-2872681	Cluster_6033	Pocillopora_meandrina_HIv1___Sc0000024	2872254	2872681	428	181	75	0.049723756906077346	-	UAUACACGUUUAGGAUCUUCAUUUUUGA	78	2	175	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2879631-2880057	Cluster_6034	Pocillopora_meandrina_HIv1___Sc0000024	2879631	2880057	427	176	58	0.19886363636363635	-	UGUCAAAUUCUCGUCUUCCUAACCUUU	67	1	170	3	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2882444-2882854	Cluster_6035	Pocillopora_meandrina_HIv1___Sc0000024	2882444	2882854	411	100	39	0.47	.	AAUGGAAAGAAAACACUGAAAAAUGACGU	25	0	99	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2886028-2886445	Cluster_6036	Pocillopora_meandrina_HIv1___Sc0000024	2886028	2886445	418	171	71	0.017543859649122806	-	UGUUCUCUAGAUGUUGCUGACACUUGUC	18	0	164	1	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2888072-2888500	Cluster_6037	Pocillopora_meandrina_HIv1___Sc0000024	2888072	2888500	429	176	26	0.017045454545454544	-	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	89	1	173	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2888791-2889209	Cluster_6038	Pocillopora_meandrina_HIv1___Sc0000024	2888791	2889209	419	155	64	0.0	-	UCUAUCCCACCUGUAAUGAAAAAAUCUUUGU	27	0	153	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2889642-2890085	Cluster_6039	Pocillopora_meandrina_HIv1___Sc0000024	2889642	2890085	444	813	151	0.01968019680196802	-	UGUGAAACUCUGGAACUCAACAAUUCC	182	14	762	17	3	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2893298-2894396	Cluster_6040	Pocillopora_meandrina_HIv1___Sc0000024	2893298	2894396	1099	2086	477	0.11553211888782358	-	UGUGAAUUUUUGGAUCAUUGGUUGUGUU	138	29	1982	8	11	15	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2894481-2894908	Cluster_6041	Pocillopora_meandrina_HIv1___Sc0000024	2894481	2894908	428	399	122	0.12781954887218044	-	UUCAGAUAUUUCAGCUGCGAGAUUGA	87	3	370	4	2	9	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2904527-2905081	Cluster_6042	Pocillopora_meandrina_HIv1___Sc0000024	2904527	2905081	555	478	136	0.6652719665271967	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	71	6	435	10	5	13	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2909494-2911796	Cluster_6043	Pocillopora_meandrina_HIv1___Sc0000024	2909494	2911796	2303	13912	2627	0.1101926394479586	-	UUAUAUGUUUCUCUAAUUCUGCACGAGU	863	212	12953	85	71	167	424	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2912380-2914163	Cluster_6044	Pocillopora_meandrina_HIv1___Sc0000024	2912380	2914163	1784	4051	1268	0.9340903480622068	+	UGAUCUUGUAACAAUUUCCCUGUCAGA	411	59	3861	23	11	31	66	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2919104-2919605	Cluster_6045	Pocillopora_meandrina_HIv1___Sc0000024	2919104	2919605	502	495	242	0.3434343434343434	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	31	13	451	2	3	5	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2921056-2921472	Cluster_6046	Pocillopora_meandrina_HIv1___Sc0000024	2921056	2921472	417	120	51	0.008333333333333333	-	UGACUAACCAUGACCAAGACUGAUCAUAUU	47	3	116	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2923270-2924756	Cluster_6047	Pocillopora_meandrina_HIv1___Sc0000024	2923270	2924756	1487	129667	3306	0.0004241634340271619	-	UGCGUUUCUGGUAGACUUAUGUUUUGAAA	24913	2383	122524	711	915	1336	1798	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2925030-2926622	Cluster_6048	Pocillopora_meandrina_HIv1___Sc0000024	2925030	2926622	1593	1644	652	0.0006082725060827251	-	UCGGUAUUUUCUGCAAGAAACAGCAAGAGA	78	32	1570	9	11	9	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2927288-2927864	Cluster_6049	Pocillopora_meandrina_HIv1___Sc0000024	2927288	2927864	577	594	240	0.021885521885521887	-	UCCCGGUAAUCACUCAAAGAAUAAUGAGA	68	10	562	3	6	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2928128-2928571	Cluster_6050	Pocillopora_meandrina_HIv1___Sc0000024	2928128	2928571	444	2793	252	0.0028643036161833156	-	UUAAGAUUAAUUGAUAGGAGAAGUAAAUU	1236	32	2706	18	4	16	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2928771-2929204	Cluster_6051	Pocillopora_meandrina_HIv1___Sc0000024	2928771	2929204	434	288	154	0.05555555555555555	-	UGACUAAUGAAUAUGAAAGACGGAUGCGGGU	15	11	267	4	1	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2929949-2930654	Cluster_6052	Pocillopora_meandrina_HIv1___Sc0000024	2929949	2930654	706	574	271	0.041811846689895474	-	UGAUUUUAGCAGACUGGGUGGCUCCUA	53	38	520	1	4	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2930984-2931761	Cluster_6053	Pocillopora_meandrina_HIv1___Sc0000024	2930984	2931761	778	466	205	0.004291845493562232	-	UACAACCUUGACCGUUUUACCUCUGAAUAGU	32	22	428	2	5	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2932911-2934246	Cluster_6054	Pocillopora_meandrina_HIv1___Sc0000024	2932911	2934246	1336	33255	1892	0.0003909186588482935	-	UGUGGAUAAUUUAAUAACUGCAGUAAGGAUG	2437	442	29178	329	251	2542	513	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2935134-2936135	Cluster_6055	Pocillopora_meandrina_HIv1___Sc0000024	2935134	2936135	1002	79405	1543	0.0002518733077262137	-	UCAGACUCACUGAAGGUACCGCUUGAAGUA	22565	215	78916	50	61	75	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2938496-2938922	Cluster_6056	Pocillopora_meandrina_HIv1___Sc0000024	2938496	2938922	427	103	19	0.0	-	CUCUGCUGACUGCAGGACCUUCCUUGC	56	0	103	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2939249-2939713	Cluster_6057	Pocillopora_meandrina_HIv1___Sc0000024	2939249	2939713	465	5519	291	0.0003623844899438304	-	UAGACUGUUUCCGCCCGUUGUAUGUGUAC	1219	22	5474	4	6	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2939960-2940388	Cluster_6058	Pocillopora_meandrina_HIv1___Sc0000024	2939960	2940388	429	129	45	0.0	-	UUGGACUUUGAACCGCAGACCAUGCUGUU	17	4	125	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2940581-2941092	Cluster_6059	Pocillopora_meandrina_HIv1___Sc0000024	2940581	2941092	512	472	203	0.0	-	UCAGGUCUGUCUUCCUCUGCUACAAGC	25	5	451	3	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2943422-2943998	Cluster_6060	Pocillopora_meandrina_HIv1___Sc0000024	2943422	2943998	577	311	131	0.003215434083601286	-	UGUUUGACUGCACAAUUCCUUACUGCACA	39	7	290	2	5	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2944854-2946315	Cluster_6061	Pocillopora_meandrina_HIv1___Sc0000024	2944854	2946315	1462	5894	1077	0.0037326094333220224	-	UCUUUGUUUACCCCAGUUCUGUUUAACU	505	70	5653	13	21	45	92	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2946412-2947090	Cluster_6062	Pocillopora_meandrina_HIv1___Sc0000024	2946412	2947090	679	2924	616	0.002051983584131327	-	UGUGUCUUUGCCAGUGUGCAACUCUGUGCUC	182	31	2826	9	8	23	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2947621-2948036	Cluster_6063	Pocillopora_meandrina_HIv1___Sc0000024	2947621	2948036	416	96	53	0.010416666666666666	-	UGAUAUUUUAACUUUCAUUUUAGUAGUGC	9	2	86	0	0	0	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2948127-2948556	Cluster_6064	Pocillopora_meandrina_HIv1___Sc0000024	2948127	2948556	430	253	96	0.0	-	AAAGAGCUGAUUUGUUAUUGAAGGUUAAC	29	2	248	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2949354-2950434	Cluster_6065	Pocillopora_meandrina_HIv1___Sc0000024	2949354	2950434	1081	2294	394	0.02005231037489102	-	AGGUAUAGGUUACUCAAGAUUAAUUGAU	251	38	2159	22	4	13	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2951226-2951636	Cluster_6066	Pocillopora_meandrina_HIv1___Sc0000024	2951226	2951636	411	184	109	0.010869565217391304	-	UGAUUUUAGCAGACUGGGUGGCUCCUA	12	9	166	0	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2951811-2952697	Cluster_6067	Pocillopora_meandrina_HIv1___Sc0000024	2951811	2952697	887	930	323	0.0032258064516129032	-	UGGUUCACUUCUUUAGCACACACAUCAAGA	89	27	875	5	4	12	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2953534-2955247	Cluster_6068	Pocillopora_meandrina_HIv1___Sc0000024	2953534	2955247	1714	15358	1449	0.00032556322437817426	-	UGAUUAAGCUCCUCUAGUUCUCGGCAGC	2305	351	14220	76	163	393	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2955586-2956354	Cluster_6069	Pocillopora_meandrina_HIv1___Sc0000024	2955586	2956354	769	1023	399	0.006842619745845552	-	UAAGACAAAUGGGGCUUAUGGCAAUGACC	120	22	977	4	8	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2956923-2957505	Cluster_6070	Pocillopora_meandrina_HIv1___Sc0000024	2956923	2957505	583	463	212	0.0021598272138228943	-	UGUGAUUUGUUAUUACCUAUGGUGGGAUU	28	12	438	0	4	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2957673-2959749	Cluster_6071	Pocillopora_meandrina_HIv1___Sc0000024	2957673	2959749	2077	4348	1297	0.002529898804047838	-	AGCAGCAAAUCACACUACGUGCACUCAAC	686	80	4153	9	31	35	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2961623-2962054	Cluster_6072	Pocillopora_meandrina_HIv1___Sc0000024	2961623	2962054	432	583	111	0.003430531732418525	-	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	224	2	575	4	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2962808-2963480	Cluster_6073	Pocillopora_meandrina_HIv1___Sc0000024	2962808	2963480	673	2125	648	0.12941176470588237	-	UGUGCGUGUUUUCACUGCGGCGACUGUCGC	193	63	1766	22	24	66	184	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:2964138-2964604	Cluster_6074	Pocillopora_meandrina_HIv1___Sc0000024	2964138	2964604	467	418	240	0.0023923444976076554	-	UGUGCGUUUCCCCUGCAGAGGACUUUGU	18	13	392	1	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3011473-3011900	Cluster_6075	Pocillopora_meandrina_HIv1___Sc0000024	3011473	3011900	428	172	30	0.9593023255813954	+	UAGGAAAUAAAAAACGGAGAAGCAAUUA	43	2	159	7	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3012456-3012891	Cluster_6076	Pocillopora_meandrina_HIv1___Sc0000024	3012456	3012891	436	340	160	0.029411764705882353	-	UGAAUUCUGCCAGAAUCUCUUCGUCUGUC	23	2	321	9	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3026184-3026614	Cluster_6077	Pocillopora_meandrina_HIv1___Sc0000024	3026184	3026614	431	294	8	0.003401360544217687	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	285	0	293	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3128967-3129382	Cluster_6078	Pocillopora_meandrina_HIv1___Sc0000024	3128967	3129382	416	108	11	0.9814814814814815	+	GCUGGGAUUUUGCACC	71	108	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3322378-3322792	Cluster_6079	Pocillopora_meandrina_HIv1___Sc0000024	3322378	3322792	415	139	6	1.0	+	UGGCUGGCUAGGCGG	75	139	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3340389-3340814	Cluster_6080	Pocillopora_meandrina_HIv1___Sc0000024	3340389	3340814	426	2625	130	0.0015238095238095239	-	UCUCUCAUUGCUUUGCACGAAUUAG	1212	49	2218	13	17	316	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3341706-3342134	Cluster_6081	Pocillopora_meandrina_HIv1___Sc0000024	3341706	3342134	429	528	32	0.003787878787878788	-	UGAACUCUUGAACAGUCAUGUGUG	236	12	106	6	150	18	236	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3344845-3345260	Cluster_6082	Pocillopora_meandrina_HIv1___Sc0000024	3344845	3345260	416	157	7	0.006369426751592357	-	GCUGGAUGAUGAGACC	141	157	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3418564-3421305	Cluster_6083	Pocillopora_meandrina_HIv1___Sc0000024	3418564	3421305	2742	9756	1978	0.975809758097581	+	UUUGACGUUUUUGAGUGGAUGAAGCUUC	1508	101	9319	22	66	130	118	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3513701-3514144	Cluster_6084	Pocillopora_meandrina_HIv1___Sc0000024	3513701	3514144	444	372	292	0.08602150537634409	-	GAAGAGACAAGGUCGCACUCUGUACGGCUU	7	142	155	26	19	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3537929-3538343	Cluster_6085	Pocillopora_meandrina_HIv1___Sc0000024	3537929	3538343	415	82	25	1.0	+	CAGCUGGUGCUCAGUUAGGUUAGU	39	6	5	9	1	5	56	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3627742-3628216	Cluster_6086	Pocillopora_meandrina_HIv1___Sc0000024	3627742	3628216	475	2664	202	0.9568318318318318	+	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	1410	4	2636	1	3	13	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3838751-3839209	Cluster_6087	Pocillopora_meandrina_HIv1___Sc0000024	3838751	3839209	459	458	145	0.8100436681222707	+	UAGUCGACUGAAUUGCUCCGUGUAAGAGG	44	17	403	3	2	9	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3842999-3843408	Cluster_6088	Pocillopora_meandrina_HIv1___Sc0000024	3842999	3843408	410	150	79	0.8733333333333333	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	11	2	137	1	1	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3896813-3898219	Cluster_6089	Pocillopora_meandrina_HIv1___Sc0000024	3896813	3898219	1407	5025	605	0.014925373134328358	-	UAUGAUCUUACAAGAACUGAACUGUGUA	794	4	4969	1	4	20	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:3979358-3979772	Cluster_6090	Pocillopora_meandrina_HIv1___Sc0000024	3979358	3979772	415	99	7	1.0	+	UGCAACUCUGGAACA	38	99	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4039267-4039915	Cluster_6091	Pocillopora_meandrina_HIv1___Sc0000024	4039267	4039915	649	567	253	0.7248677248677249	.	UAGAUCUUCAUUAUGCUGUUUAGCCUGU	37	6	527	1	4	10	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4056716-4057308	Cluster_6092	Pocillopora_meandrina_HIv1___Sc0000024	4056716	4057308	593	5287	555	0.6667297143937961	.	UCGACAUCGUCAAUGCACUCUUUGCGCG	385	99	4027	71	24	87	979	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4058901-4059349	Cluster_6093	Pocillopora_meandrina_HIv1___Sc0000024	4058901	4059349	449	1586	234	0.9716267339218159	+	UGAAUGCUGGUAUCUUGAUAGUAGAACA	242	6	1538	0	2	32	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4083649-4086648	Cluster_6094	Pocillopora_meandrina_HIv1___Sc0000024	4083649	4086648	3000	20777	3529	0.1039129806998123	-	UGAUUUCCACUGAUCGGCUGUGAAGCCCC	1093	233	18694	89	200	425	1136	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4093656-4094411	Cluster_6095	Pocillopora_meandrina_HIv1___Sc0000024	4093656	4094411	756	6657	701	0.5577587501877723	.	CCUCUUCUUAUUGGGAUGUGUACUCUUUC	1307	40	6348	24	32	88	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4106585-4107013	Cluster_6096	Pocillopora_meandrina_HIv1___Sc0000024	4106585	4107013	429	223	112	0.9103139013452914	+	UGAUUUUGGAAUGUUGUUUACGUUGUG	18	3	213	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4127709-4128274	Cluster_6097	Pocillopora_meandrina_HIv1___Sc0000024	4127709	4128274	566	703	207	0.9445234708392604	+	UGAUUAGAAUCGGGAACAACCA	162	10	498	5	167	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4161863-4162403	Cluster_6098	Pocillopora_meandrina_HIv1___Sc0000024	4161863	4162403	541	1417	333	0.08821453775582216	-	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	271	18	1289	10	12	20	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4163095-4163523	Cluster_6099	Pocillopora_meandrina_HIv1___Sc0000024	4163095	4163523	429	218	91	0.06880733944954129	-	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	34	0	202	1	1	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4164820-4165226	Cluster_6100	Pocillopora_meandrina_HIv1___Sc0000024	4164820	4165226	407	151	92	0.11258278145695365	-	UGCUACAUAAUCUUCGACAUCUUUGUUCA	25	0	143	0	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4165578-4166007	Cluster_6101	Pocillopora_meandrina_HIv1___Sc0000024	4165578	4166007	430	683	204	0.008784773060029283	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	189	2	668	0	3	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4201911-4202457	Cluster_6102	Pocillopora_meandrina_HIv1___Sc0000024	4201911	4202457	547	627	174	0.011164274322169059	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	73	5	611	0	0	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4207685-4208168	Cluster_6103	Pocillopora_meandrina_HIv1___Sc0000024	4207685	4208168	484	531	176	0.864406779661017	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	140	1	515	3	3	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4208466-4208893	Cluster_6104	Pocillopora_meandrina_HIv1___Sc0000024	4208466	4208893	428	145	40	0.9517241379310345	+	UGGAAUUCGAAGCAAGUAACAAUGGACA	31	4	130	4	4	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4211041-4211469	Cluster_6105	Pocillopora_meandrina_HIv1___Sc0000024	4211041	4211469	429	327	75	0.021406727828746176	-	UAGGACAACUGAGAAUCCACGUAGACUC	87	0	316	2	7	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4413137-4413552	Cluster_6106	Pocillopora_meandrina_HIv1___Sc0000024	4413137	4413552	416	245	17	0.9959183673469387	+	GACGGAGCUUGGAGCC	88	245	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4472787-4473204	Cluster_6107	Pocillopora_meandrina_HIv1___Sc0000024	4472787	4473204	418	141	16	0.0070921985815602835	-	GAAGUUCUGGUUUAAAAA	98	137	2	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4490178-4490607	Cluster_6108	Pocillopora_meandrina_HIv1___Sc0000024	4490178	4490607	430	219	100	0.9771689497716894	+	UACAAUGAAUACUGUUCCAGAAUUAAGGGC	51	4	204	3	2	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4543520-4543968	Cluster_6109	Pocillopora_meandrina_HIv1___Sc0000024	4543520	4543968	449	2065	226	0.03292978208232446	-	CGAUCCAACAAGAACAAUAUGUGCAGACU	414	26	1885	7	26	22	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4629024-4629867	Cluster_6110	Pocillopora_meandrina_HIv1___Sc0000024	4629024	4629867	844	1867	1063	0.998393144081414	+	UAGGGUUGCCCCAGAGGAACA	16	857	594	128	104	93	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4630626-4631871	Cluster_6111	Pocillopora_meandrina_HIv1___Sc0000024	4630626	4631871	1246	4559	2573	0.9984645755648168	+	ACCGACUACUUGAUGAAGAUCUUGAC	37	1534	1688	322	384	302	329	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4692842-4693265	Cluster_6112	Pocillopora_meandrina_HIv1___Sc0000024	4692842	4693265	424	96	32	0.0	-	AAAGGAAUUAGGACUCUGGGAUCG	14	5	51	0	4	8	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4699114-4699771	Cluster_6113	Pocillopora_meandrina_HIv1___Sc0000024	4699114	4699771	658	2933	277	0.9338561200136379	+	UGUGGUGUAAAAUCGAUCUUUGUUCUUU	542	2	2871	10	5	5	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4706038-4706444	Cluster_6114	Pocillopora_meandrina_HIv1___Sc0000024	4706038	4706444	407	95	59	0.0	-	CUUGAGACGAGGAGCUUUUGUGCA	10	31	32	4	3	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4808666-4808760	Cluster_6115	Pocillopora_meandrina_HIv1___Sc0000024	4808666	4808760	95	3172	172	0.9996847414880202	+	AGAACCCAAGAAUCUCGA	871	2846	1	297	24	3	1	N	Y	NA
Pocillopora_meandrina_HIv1___Sc0000024:4920463-4920900	Cluster_6116	Pocillopora_meandrina_HIv1___Sc0000024	4920463	4920900	438	342	148	0.6871345029239766	.	UACUGCAUUUUGGAAAGCUUCGGCUCA	39	17	289	6	2	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:4986862-4987297	Cluster_6117	Pocillopora_meandrina_HIv1___Sc0000024	4986862	4987297	436	369	96	0.9322493224932249	+	UCUUCCACUGAUCGUUGAGUUGAAGACUG	47	5	333	10	6	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5009879-5010307	Cluster_6118	Pocillopora_meandrina_HIv1___Sc0000024	5009879	5010307	429	200	92	0.105	-	UGAACGUAUAGCCAUCCAGUUGAACUGG	17	2	188	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5010321-5010742	Cluster_6119	Pocillopora_meandrina_HIv1___Sc0000024	5010321	5010742	422	146	95	0.2465753424657534	.	UGACUUUAACACUAUAAACAUUCUGAGG	8	2	123	3	5	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5029510-5029936	Cluster_6120	Pocillopora_meandrina_HIv1___Sc0000024	5029510	5029936	427	118	46	0.9661016949152542	+	UGAUCCAACAAGAACAAUAUGUGCUGA	34	1	111	0	0	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5042981-5043407	Cluster_6121	Pocillopora_meandrina_HIv1___Sc0000024	5042981	5043407	427	169	67	0.727810650887574	.	UAGGAUAUAUCACUUGCGUAAUUUACAACA	32	15	143	5	4	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5153233-5153738	Cluster_6122	Pocillopora_meandrina_HIv1___Sc0000024	5153233	5153738	506	542	255	0.2896678966789668	.	UGUUCUCGGUUAUCAGCUCAGAAAUGCA	24	26	444	6	10	12	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5154716-5155141	Cluster_6123	Pocillopora_meandrina_HIv1___Sc0000024	5154716	5155141	426	102	40	0.0196078431372549	-	UGUGUAGAUAUGUCUUUUGGACAGGA	27	0	101	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5201310-5201725	Cluster_6124	Pocillopora_meandrina_HIv1___Sc0000024	5201310	5201725	416	99	8	0.98989898989899	+	GGCCGUGAUCGUAUAA	86	99	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5206554-5207098	Cluster_6125	Pocillopora_meandrina_HIv1___Sc0000024	5206554	5207098	545	2507	372	0.9988033506182689	+	UAGCAUUGUCGGUAUCUGCAGCU	629	263	583	55	121	1398	87	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000024:5274612-5275041	Cluster_6126	Pocillopora_meandrina_HIv1___Sc0000024	5274612	5275041	430	302	63	0.9039735099337748	+	UUCUGGUUAUCUUGCGAGAAUUUUGUCACC	85	10	277	6	2	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:52013-52437	Cluster_6127	Pocillopora_meandrina_HIv1___Sc0000025	52013	52437	425	166	51	0.1144578313253012	-	UACUGAACUGGCUAGGAUUUGUGCA	21	29	121	0	0	0	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:52666-53245	Cluster_6128	Pocillopora_meandrina_HIv1___Sc0000025	52666	53245	580	356	160	0.23876404494382023	.	UGAACGAUCCAUUUCAGCCACGGCUAAAGUA	17	5	332	1	4	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:57453-62607	Cluster_6129	Pocillopora_meandrina_HIv1___Sc0000025	57453	62607	5155	26069	5616	0.09321416241512909	-	UGUAUUGUUGAAUCUUCUGGUUUGUCGA	1253	572	23910	178	266	411	732	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:65003-65609	Cluster_6130	Pocillopora_meandrina_HIv1___Sc0000025	65003	65609	607	217	67	0.11059907834101383	-	UCGUCUCACGGGCUGCCAAGCGAUGCGG	43	6	182	3	5	3	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:65671-66099	Cluster_6131	Pocillopora_meandrina_HIv1___Sc0000025	65671	66099	429	220	45	0.004545454545454545	-	UUGGUCAUAAAGCACAUGAAGAACCGC	55	3	216	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:81390-81833	Cluster_6132	Pocillopora_meandrina_HIv1___Sc0000025	81390	81833	444	888	176	0.21396396396396397	.	UCCAGAUCGUUAAGAAAUAUAUUGAACA	227	10	769	8	6	27	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:85045-85474	Cluster_6133	Pocillopora_meandrina_HIv1___Sc0000025	85045	85474	430	138	47	0.007246376811594203	-	UCAAAACCUUGUUGGCUGUAUUCUCUCAUC	46	3	129	0	5	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:120662-121091	Cluster_6134	Pocillopora_meandrina_HIv1___Sc0000025	120662	121091	430	1132	181	0.006183745583038869	-	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	237	0	1118	4	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:132328-132754	Cluster_6135	Pocillopora_meandrina_HIv1___Sc0000025	132328	132754	427	179	63	0.0335195530726257	-	UGCCUCUUAUAAAACAUAUCGUUAUGCUGUA	58	10	165	2	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:133277-133808	Cluster_6136	Pocillopora_meandrina_HIv1___Sc0000025	133277	133808	532	1346	362	0.01411589895988113	-	UGAAGGAACGUGUGGCCCCUCACGAGGUA	78	10	1303	3	6	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:134251-134678	Cluster_6137	Pocillopora_meandrina_HIv1___Sc0000025	134251	134678	428	201	61	0.03980099502487562	-	UUUAUCCUUUGAUUCUGGUUCGGCGGCC	39	0	189	0	4	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:138089-138621	Cluster_6138	Pocillopora_meandrina_HIv1___Sc0000025	138089	138621	533	486	217	0.38065843621399176	.	UCAAUGUACAAAGCUUAGAGACGCUCGGGA	52	6	456	1	4	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:139246-140097	Cluster_6139	Pocillopora_meandrina_HIv1___Sc0000025	139246	140097	852	1271	245	0.911093627065303	+	CGUGUACGACGCCUCUGCCCGAGCUUCAG	366	10	1218	12	4	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:141465-141886	Cluster_6140	Pocillopora_meandrina_HIv1___Sc0000025	141465	141886	422	168	79	0.15476190476190477	-	UCACGAAUCUUUGCCAUUGUGAGGCUC	20	6	154	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:142044-142474	Cluster_6141	Pocillopora_meandrina_HIv1___Sc0000025	142044	142474	431	379	192	0.36147757255936674	.	UACGUCUAGUAUAACCUCCUCUAACUCGG	21	9	310	5	6	30	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:142480-142918	Cluster_6142	Pocillopora_meandrina_HIv1___Sc0000025	142480	142918	439	298	150	0.23154362416107382	.	UCUAACGGAUACAGCUGCUGUACUGCU	31	22	252	5	4	2	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:151851-152280	Cluster_6143	Pocillopora_meandrina_HIv1___Sc0000025	151851	152280	430	257	34	0.0038910505836575876	-	UCAGAAUCAAAUUUUUAGCAGUGGGUAGAUC	62	67	189	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:152606-153036	Cluster_6144	Pocillopora_meandrina_HIv1___Sc0000025	152606	153036	431	280	17	0.010714285714285714	-	UCAGCUCCAUAUCUUGUUUAACAUCUUAAAC	195	1	278	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:153609-154122	Cluster_6145	Pocillopora_meandrina_HIv1___Sc0000025	153609	154122	514	488	66	0.0	-	UCAAAUGACUGUAGUCUCCAGUGCCAAGACU	106	5	483	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:159877-160308	Cluster_6146	Pocillopora_meandrina_HIv1___Sc0000025	159877	160308	432	2066	45	0.0	-	UCCAGAACUUUUUCACGACCCAAAUGUGGUA	1199	6	2054	2	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:174244-174676	Cluster_6147	Pocillopora_meandrina_HIv1___Sc0000025	174244	174676	433	469	71	0.010660980810234541	-	AACUACUGCUCGUGCUCUAGAUAUGACA	122	18	446	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:177572-177986	Cluster_6148	Pocillopora_meandrina_HIv1___Sc0000025	177572	177986	415	98	38	0.0	-	AAACUGUCUCAUUUCUGUGCGGAUCAUG	21	21	74	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:189065-189920	Cluster_6149	Pocillopora_meandrina_HIv1___Sc0000025	189065	189920	856	2471	645	0.04896802913800081	-	UCUUCAACAUGGACAGGCGAGUUAUCUAUC	253	45	2268	15	31	52	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:189972-190401	Cluster_6150	Pocillopora_meandrina_HIv1___Sc0000025	189972	190401	430	1070	39	0.005607476635514018	-	UCGGGCUUCUUAGCUUUCAAGUCUUUGGGA	526	2	1062	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:197269-197991	Cluster_6151	Pocillopora_meandrina_HIv1___Sc0000025	197269	197991	723	1566	247	0.017879948914431672	-	UGGAAAGUUCUCUGGUAUGCGAGUCAGC	432	23	1505	10	4	15	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:198924-199356	Cluster_6152	Pocillopora_meandrina_HIv1___Sc0000025	198924	199356	433	1350	161	0.0014814814814814814	-	UGUUGUGGUUUAGGCGUUCUGUAUCUCUAC	262	14	1314	4	2	8	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:200022-200444	Cluster_6153	Pocillopora_meandrina_HIv1___Sc0000025	200022	200444	423	257	79	0.05058365758754864	-	UCGGUAUAGCUUUCAAAACAGUC	88	11	139	0	2	100	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:215224-215973	Cluster_6154	Pocillopora_meandrina_HIv1___Sc0000025	215224	215973	750	2606	290	0.024558710667689946	-	UCAAUGCUUCUUGUCUGUACCAUCUGUGC	867	11	2580	1	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:309386-309814	Cluster_6155	Pocillopora_meandrina_HIv1___Sc0000025	309386	309814	429	180	47	0.05	-	GCCCGACUAGCUCAGUCGGUAGAGCAUGA	64	5	170	1	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:595825-596251	Cluster_6156	Pocillopora_meandrina_HIv1___Sc0000025	595825	596251	427	257	82	0.9455252918287937	+	UGAAACUCUGAUCUGAAAAUAUUUUC	58	20	204	5	3	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:664697-665127	Cluster_6157	Pocillopora_meandrina_HIv1___Sc0000025	664697	665127	431	1845	147	0.001084010840108401	-	UCACUCGUAAGUGGUCGCUCGUAAAUACGU	546	8	1779	14	10	29	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:721626-722045	Cluster_6158	Pocillopora_meandrina_HIv1___Sc0000025	721626	722045	420	180	104	0.9333333333333333	+	UCGGGCUAUGUAAACACGGA	15	128	14	22	9	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:733525-733950	Cluster_6159	Pocillopora_meandrina_HIv1___Sc0000025	733525	733950	426	176	100	0.08522727272727272	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	23	1	166	0	2	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:787805-788233	Cluster_6160	Pocillopora_meandrina_HIv1___Sc0000025	787805	788233	429	107	26	0.9906542056074766	+	ACUGGUACAAACAAGGGUCGCGUAGCCUUU	41	5	101	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:816336-816776	Cluster_6161	Pocillopora_meandrina_HIv1___Sc0000025	816336	816776	441	2609	526	0.9693369106937524	+	UAUUGUAUCUGAUGUUUUCAAUGGUGUA	376	38	2453	5	13	39	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:816830-817505	Cluster_6162	Pocillopora_meandrina_HIv1___Sc0000025	816830	817505	676	7850	578	0.9970700636942675	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2056	15	7716	7	42	27	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:884368-885553	Cluster_6163	Pocillopora_meandrina_HIv1___Sc0000025	884368	885553	1186	14133	1363	0.030354489492676714	-	UUUGUAGGCUCUAACAGUACAUUGUU	4270	301	13476	60	56	108	132	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:896573-897169	Cluster_6164	Pocillopora_meandrina_HIv1___Sc0000025	896573	897169	597	5643	505	0.9973418394471026	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	857	20	5573	2	8	11	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1160970-1161596	Cluster_6165	Pocillopora_meandrina_HIv1___Sc0000025	1160970	1161596	627	785	131	0.025477707006369428	-	UCCUUUGACUGAUACUCAACUUUCGAUAUC	363	1	776	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1169802-1170230	Cluster_6166	Pocillopora_meandrina_HIv1___Sc0000025	1169802	1170230	429	102	17	0.00980392156862745	-	ACUGGUACAAACAAGGGUCGCGUAGCCUUU	49	1	101	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1275199-1275824	Cluster_6167	Pocillopora_meandrina_HIv1___Sc0000025	1275199	1275824	626	446	101	0.03587443946188341	-	UCCUUUGACUGAUACUCAACUUUCGAUAUC	179	1	440	0	0	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1324924-1325353	Cluster_6168	Pocillopora_meandrina_HIv1___Sc0000025	1324924	1325353	430	249	74	0.0321285140562249	-	UAAGGAUCUCAAGGCGAAUAAAGCAAAG	55	9	236	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1480405-1481707	Cluster_6169	Pocillopora_meandrina_HIv1___Sc0000025	1480405	1481707	1303	1620	608	0.019135802469135803	-	UAUCUGUUACGUCAUCAAAUUAUAAUGCAC	149	13	1559	3	5	17	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1483451-1483951	Cluster_6170	Pocillopora_meandrina_HIv1___Sc0000025	1483451	1483951	501	254	125	0.015748031496062992	-	UAUGAUACAUCUUCUUUACGUCUCCGAU	18	4	250	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1486022-1486435	Cluster_6171	Pocillopora_meandrina_HIv1___Sc0000025	1486022	1486435	414	203	117	0.009852216748768473	-	UAAUAAGCUUGGAAAGUAGUCUCGAGUCCA	10	6	194	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1486636-1487065	Cluster_6172	Pocillopora_meandrina_HIv1___Sc0000025	1486636	1487065	430	1442	146	0.0034674063800277394	-	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	695	25	1254	0	0	5	158	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:1777996-1778413	Cluster_6173	Pocillopora_meandrina_HIv1___Sc0000025	1777996	1778413	418	168	87	0.5833333333333334	.	UCUUAAAAAUGCUGCCCUCGGC	31	59	8	35	57	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2071414-2071843	Cluster_6174	Pocillopora_meandrina_HIv1___Sc0000025	2071414	2071843	430	289	97	0.9965397923875432	+	UGCCUCAAUUAUUUGUUUCCACUGUUGAUC	117	3	278	1	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2075374-2075803	Cluster_6175	Pocillopora_meandrina_HIv1___Sc0000025	2075374	2075803	430	304	78	1.0	+	UACGAGUACGUGGCUCAGAAUUUCCCUUGG	47	31	269	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2224827-2225241	Cluster_6176	Pocillopora_meandrina_HIv1___Sc0000025	2224827	2225241	415	85	39	0.023529411764705882	-	UAAACGCUGUGCUUUCUCGUAAUUUCUUUG	17	0	82	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2231869-2232296	Cluster_6177	Pocillopora_meandrina_HIv1___Sc0000025	2231869	2232296	428	78	25	0.9871794871794872	+	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	14	1	77	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2234954-2235379	Cluster_6178	Pocillopora_meandrina_HIv1___Sc0000025	2234954	2235379	426	244	145	0.8647540983606558	+	UAUCCUUAAUCUUGAUGGCUCGAGACGU	11	2	234	2	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2235397-2235827	Cluster_6179	Pocillopora_meandrina_HIv1___Sc0000025	2235397	2235827	431	330	156	0.9515151515151515	+	UGAUAACUGUACUCUUGAAAUUCAUCGAUGC	19	5	313	3	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2369398-2369822	Cluster_6180	Pocillopora_meandrina_HIv1___Sc0000025	2369398	2369822	425	306	61	1.0	+	CGCGGAAAGAGGAGAAAUUGCACU	48	25	148	3	7	2	121	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2646833-2647260	Cluster_6181	Pocillopora_meandrina_HIv1___Sc0000025	2646833	2647260	428	199	70	0.9396984924623115	+	UGAAUUCAGUAGAGCCGUCGAUCCAAUU	63	21	161	9	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2853101-2853516	Cluster_6182	Pocillopora_meandrina_HIv1___Sc0000025	2853101	2853516	416	111	8	0.9819819819819819	+	GUGUUUUUCGGUCUGC	49	111	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2908337-2908753	Cluster_6183	Pocillopora_meandrina_HIv1___Sc0000025	2908337	2908753	417	273	18	0.007326007326007326	-	UAACGGUCCUAAGGUAG	110	273	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:2974458-2974886	Cluster_6184	Pocillopora_meandrina_HIv1___Sc0000025	2974458	2974886	429	198	20	0.1111111111111111	-	UAAGAGCUCCGCUUUUAGGCUUGACUAAA	150	0	197	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3200807-3201225	Cluster_6185	Pocillopora_meandrina_HIv1___Sc0000025	3200807	3201225	419	131	73	0.26717557251908397	.	UGUGUUGAAAAAUGUAGACAACGUUCUCUGC	11	1	105	1	7	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3255410-3255825	Cluster_6186	Pocillopora_meandrina_HIv1___Sc0000025	3255410	3255825	416	132	14	0.0	-	CGUGGAAGGUAGGUAU	42	132	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3258105-3258783	Cluster_6187	Pocillopora_meandrina_HIv1___Sc0000025	3258105	3258783	679	603	218	0.06467661691542288	-	UCAUCUCCGAGGCUGUUGUAUCAUCAAC	58	10	570	2	2	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3395192-3395616	Cluster_6188	Pocillopora_meandrina_HIv1___Sc0000025	3395192	3395616	425	102	21	0.8431372549019608	+	UGGAUUUUCCUCUACAUCGUUUGCU	78	2	98	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3421163-3421658	Cluster_6189	Pocillopora_meandrina_HIv1___Sc0000025	3421163	3421658	496	679	100	0.7908689248895434	.	UGAGAUAUGAAUUAAAAACUGAAUGUGGA	99	1	655	1	7	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3587727-3588154	Cluster_6190	Pocillopora_meandrina_HIv1___Sc0000025	3587727	3588154	428	353	86	0.9801699716713881	+	UUGUGAUGGAGGCGAUGAGCAGUGAAGA	45	16	199	3	8	14	113	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3682065-3682492	Cluster_6191	Pocillopora_meandrina_HIv1___Sc0000025	3682065	3682492	428	146	53	0.958904109589041	+	UAUCAAGUAGAGAUGUCUGAGCCCGAGG	20	3	139	0	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3683402-3683929	Cluster_6192	Pocillopora_meandrina_HIv1___Sc0000025	3683402	3683929	528	1299	326	0.9676674364896074	+	UUUUCGGCUACUUCUGUCCAUUUUUUGGC	130	14	1256	1	1	11	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3694598-3695084	Cluster_6193	Pocillopora_meandrina_HIv1___Sc0000025	3694598	3695084	487	232	113	0.9051724137931034	+	UUAAGGAGCAGAUUUCAAGCUGAGGACGG	15	10	216	2	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:3699216-3700043	Cluster_6194	Pocillopora_meandrina_HIv1___Sc0000025	3699216	3700043	828	636	456	0.015723270440251572	-	CACAUGACGAUCUGUACGUGAGCU	12	177	249	56	39	41	74	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4002468-4002889	Cluster_6195	Pocillopora_meandrina_HIv1___Sc0000025	4002468	4002889	422	113	19	0.017699115044247787	-	AAGACUACAAAUUGCACAUGCC	57	8	3	8	79	13	2	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4039565-4039984	Cluster_6196	Pocillopora_meandrina_HIv1___Sc0000025	4039565	4039984	420	100	6	0.99	+	GGUGGGCUGUUGGAUCUUGA	95	100	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4070287-4070818	Cluster_6197	Pocillopora_meandrina_HIv1___Sc0000025	4070287	4070818	532	469	217	0.9402985074626866	+	UGAAUUCUUCGUAAACGGUUUCCUGGUC	84	5	445	3	0	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4072253-4072661	Cluster_6198	Pocillopora_meandrina_HIv1___Sc0000025	4072253	4072661	409	232	135	0.21982758620689655	.	UACGUUGCUUGACCUCAUCAUUUUUGG	9	2	221	2	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4077669-4078087	Cluster_6199	Pocillopora_meandrina_HIv1___Sc0000025	4077669	4078087	419	131	68	0.6870229007633588	.	UCGGUUCUUCAAUGCUACUGCUCCAACU	11	3	119	2	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4114969-4115401	Cluster_6200	Pocillopora_meandrina_HIv1___Sc0000025	4114969	4115401	433	441	106	0.2653061224489796	.	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	176	5	421	2	1	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4342566-4342989	Cluster_6201	Pocillopora_meandrina_HIv1___Sc0000025	4342566	4342989	424	97	36	0.9381443298969072	+	CGAUGGAUAAAAAGGAGAUCACGG	29	3	35	0	2	6	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4472859-4473281	Cluster_6202	Pocillopora_meandrina_HIv1___Sc0000025	4472859	4473281	423	259	47	0.04633204633204633	-	UUCGCGUCUGAAGCUGUUAGAGU	91	17	8	2	61	165	6	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4554604-4555029	Cluster_6203	Pocillopora_meandrina_HIv1___Sc0000025	4554604	4555029	426	75	13	0.013333333333333334	-	UUCAAUGUGAAAAGUUUAUUUAGGAUGA	43	0	74	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4762569-4763126	Cluster_6204	Pocillopora_meandrina_HIv1___Sc0000025	4762569	4763126	558	381	205	0.5538057742782152	.	AAUACAAGCAAAGGAGUUAGAAAAUCACGA	22	5	335	2	6	5	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4764445-4765953	Cluster_6205	Pocillopora_meandrina_HIv1___Sc0000025	4764445	4765953	1509	1472	561	0.1875	-	UGGGAAACGGCUGUACUCGUCUAUGACGACC	74	14	1320	4	6	42	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4766196-4766830	Cluster_6206	Pocillopora_meandrina_HIv1___Sc0000025	4766196	4766830	635	915	202	0.033879781420765025	-	UGAGACGUUCGGUAGAAACACAAUGAUAUU	116	8	891	1	3	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:4902893-4903307	Cluster_6207	Pocillopora_meandrina_HIv1___Sc0000025	4902893	4903307	415	137	29	1.0	+	AGCGUGCUCUUAACGG	29	125	7	1	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5014489-5014908	Cluster_6208	Pocillopora_meandrina_HIv1___Sc0000025	5014489	5014908	420	1746	77	0.0	-	AUCCCACUCCUGACACCA	424	1742	0	4	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5091291-5091963	Cluster_6209	Pocillopora_meandrina_HIv1___Sc0000025	5091291	5091963	673	1204	351	0.526578073089701	.	UUUCUUCGAAAACGUGGCAAUCCGUGAUA	132	47	989	12	18	23	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5092925-5093743	Cluster_6210	Pocillopora_meandrina_HIv1___Sc0000025	5092925	5093743	819	954	258	0.4716981132075472	.	UAUUUUCUUCUGGUGGUUGAUGUCCUC	127	12	896	2	12	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5093750-5094195	Cluster_6211	Pocillopora_meandrina_HIv1___Sc0000025	5093750	5094195	446	427	135	0.7423887587822015	.	AUUCAUGUUAGGUGGUAGAGGUGU	76	11	229	4	9	44	130	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5095175-5095865	Cluster_6212	Pocillopora_meandrina_HIv1___Sc0000025	5095175	5095865	691	6583	489	0.07762418350296217	-	UUCAUACGGCUUCUAGAAUUUAUCCAGU	3088	68	6180	26	25	48	236	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5098043-5098471	Cluster_6213	Pocillopora_meandrina_HIv1___Sc0000025	5098043	5098471	429	151	53	0.8675496688741722	+	AGCAAGGGCACUUUUGUAAGAGAUUUUGG	27	9	131	2	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5110648-5111424	Cluster_6214	Pocillopora_meandrina_HIv1___Sc0000025	5110648	5111424	777	288	54	0.9479166666666666	+	UUGGACUGUGCAUAACCAUUUGC	127	1	125	1	5	148	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5219139-5219559	Cluster_6215	Pocillopora_meandrina_HIv1___Sc0000025	5219139	5219559	421	188	98	0.5797872340425532	.	UUCACCAUACGGACCGACCCUUU	17	77	4	37	37	26	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5246768-5247196	Cluster_6216	Pocillopora_meandrina_HIv1___Sc0000025	5246768	5247196	429	437	121	0.029748283752860413	-	UGUAGAAUCAAUCUGUUACUAAGACACC	97	3	414	10	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5293601-5294027	Cluster_6217	Pocillopora_meandrina_HIv1___Sc0000025	5293601	5294027	427	188	69	0.75	.	UUCAUGCUCUCGUUGUUCGACUGAACG	30	0	176	3	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5305154-5306148	Cluster_6218	Pocillopora_meandrina_HIv1___Sc0000025	5305154	5306148	995	1758	460	0.07906712172923777	-	UGAUAUUGUUGUCACAGAUACUUGAAAACA	242	27	1671	6	8	20	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5402913-5403340	Cluster_6219	Pocillopora_meandrina_HIv1___Sc0000025	5402913	5403340	428	190	68	0.9526315789473684	+	UGCGUGUUCUCAUUUCGGGUUGGUGAUC	24	3	180	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5405410-5405838	Cluster_6220	Pocillopora_meandrina_HIv1___Sc0000025	5405410	5405838	429	314	109	0.9299363057324841	+	UACGUGUAGAAAGCCUUCUCUGACAUC	34	1	288	2	1	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5406058-5406471	Cluster_6221	Pocillopora_meandrina_HIv1___Sc0000025	5406058	5406471	414	175	93	0.9657142857142857	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	30	0	170	0	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5406912-5407702	Cluster_6222	Pocillopora_meandrina_HIv1___Sc0000025	5406912	5407702	791	12013	1430	0.8812120203113294	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	1721	116	11373	20	245	105	154	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000025:5608384-5608800	Cluster_6223	Pocillopora_meandrina_HIv1___Sc0000025	5608384	5608800	417	501	2	0.0	-	GAUGGAUGGAGACUGCA	499	501	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:166158-166685	Cluster_6224	Pocillopora_meandrina_HIv1___Sc0000026	166158	166685	528	259	118	0.07335907335907337	-	UCGGCAACAACUGGAGUAAAAAAUUCGGGA	33	7	226	6	1	10	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:282952-283847	Cluster_6225	Pocillopora_meandrina_HIv1___Sc0000026	282952	283847	896	1293	342	0.5839133797370456	.	UGAUAAGAAAGACAUAAGAAGUUUUGG	137	18	1189	12	15	10	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:288092-289261	Cluster_6226	Pocillopora_meandrina_HIv1___Sc0000026	288092	289261	1170	2463	654	0.2679658952496955	.	AUGAGCGAUAUCGCAGAACAGCUGCUGAG	221	22	2359	9	10	16	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:335002-335416	Cluster_6227	Pocillopora_meandrina_HIv1___Sc0000026	335002	335416	415	92	15	0.021739130434782608	-	UCCGGUGCGCUCUCA	60	91	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:444352-444766	Cluster_6228	Pocillopora_meandrina_HIv1___Sc0000026	444352	444766	415	92	7	0.010869565217391304	-	CUUUCCGAGGCCGCG	86	91	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:525538-526180	Cluster_6229	Pocillopora_meandrina_HIv1___Sc0000026	525538	526180	643	1871	188	0.005344735435595938	-	UGUCAAGUAACCAAGCUUUUUCAAGACUGUU	438	8	1851	0	1	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:526212-527014	Cluster_6230	Pocillopora_meandrina_HIv1___Sc0000026	526212	527014	803	1562	303	0.24263764404609475	.	UUAGUUAACAGUCUUUUGCCCAUCACAUA	229	10	1269	23	3	42	215	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:527039-527466	Cluster_6231	Pocillopora_meandrina_HIv1___Sc0000026	527039	527466	428	375	85	0.016	-	UGCUUCUCGAUUCACAUUUUCAUUCUGU	182	7	358	1	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:569583-569989	Cluster_6232	Pocillopora_meandrina_HIv1___Sc0000026	569583	569989	407	340	240	1.0	+	GCGCUGUGCUGAAGU	12	157	82	38	19	21	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:571893-572312	Cluster_6233	Pocillopora_meandrina_HIv1___Sc0000026	571893	572312	420	236	160	0.9957627118644068	+	UGACUGCUCAACUAGCUAUGGAAAU	11	110	68	10	23	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:573346-574087	Cluster_6234	Pocillopora_meandrina_HIv1___Sc0000026	573346	574087	742	622	429	0.9935691318327974	+	CGCUUUGCGAUUGUAGAAACUGAACGCA	10	207	265	42	46	43	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:621538-621958	Cluster_6235	Pocillopora_meandrina_HIv1___Sc0000026	621538	621958	421	340	92	0.9970588235294118	+	AAGGAGGUUUUUUGAAAAA	50	199	38	61	15	5	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:630397-630858	Cluster_6236	Pocillopora_meandrina_HIv1___Sc0000026	630397	630858	462	1434	255	0.99860529986053	+	UUGAAAUGAUGCAGAAACAUGUUAGACU	185	109	960	21	56	234	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:632280-632716	Cluster_6237	Pocillopora_meandrina_HIv1___Sc0000026	632280	632716	437	1025	189	0.9882926829268293	+	ACCUACAAUGAGACUG	155	847	86	52	14	16	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:688781-689195	Cluster_6238	Pocillopora_meandrina_HIv1___Sc0000026	688781	689195	415	83	13	1.0	+	CUGUGUUGUAGGCUU	51	83	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:698283-699067	Cluster_6239	Pocillopora_meandrina_HIv1___Sc0000026	698283	699067	785	807	345	0.18835192069392812	-	UUUAGACUUGCAAACUUUGCUAAAAUGA	94	16	722	5	13	19	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:699942-700645	Cluster_6240	Pocillopora_meandrina_HIv1___Sc0000026	699942	700645	704	323	154	0.05572755417956656	-	UGUACUUUGUCUUUGUUGAAUUUGAUU	39	6	307	1	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:741428-741843	Cluster_6241	Pocillopora_meandrina_HIv1___Sc0000026	741428	741843	416	362	31	0.06906077348066299	-	CUUUCCGAGGUCGAG	130	345	9	4	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:791196-791826	Cluster_6242	Pocillopora_meandrina_HIv1___Sc0000026	791196	791826	631	1514	408	0.9682959048877147	+	UGUCGAAGAUAAGUAGCGAAGUUCUAUU	174	21	1436	21	6	8	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:792189-792607	Cluster_6243	Pocillopora_meandrina_HIv1___Sc0000026	792189	792607	419	165	101	0.9333333333333333	+	UAUAAUCAAACGUAAAACUGUGACGUGGGC	22	14	135	5	2	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:949839-950323	Cluster_6244	Pocillopora_meandrina_HIv1___Sc0000026	949839	950323	485	384	214	0.984375	+	CCUUCGAUAGCUCAGUUGGUAGAGCGGA	17	199	97	33	9	23	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:977072-977501	Cluster_6245	Pocillopora_meandrina_HIv1___Sc0000026	977072	977501	430	247	19	0.0	-	UGAAUGCUCUGCGACUGAGUGUAGGACGAG	103	5	239	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:989151-989567	Cluster_6246	Pocillopora_meandrina_HIv1___Sc0000026	989151	989567	417	212	28	1.0	+	CUUUUCGAGGUCGCG	50	205	2	3	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1030723-1031142	Cluster_6247	Pocillopora_meandrina_HIv1___Sc0000026	1030723	1031142	420	120	55	0.275	.	UCGAUUCCUGAUGUUUCCCGAGA	29	37	18	4	4	53	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1128307-1128734	Cluster_6248	Pocillopora_meandrina_HIv1___Sc0000026	1128307	1128734	428	204	101	0.04411764705882353	-	UACGAUCGCUUUGACUUGACUCGCGUCACA	17	8	191	2	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1131534-1132189	Cluster_6249	Pocillopora_meandrina_HIv1___Sc0000026	1131534	1132189	656	669	241	0.08071748878923767	-	UAAUGACUUCAGAGUAGACAGAGACGGU	76	9	633	4	3	2	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1132889-1133482	Cluster_6250	Pocillopora_meandrina_HIv1___Sc0000026	1132889	1133482	594	347	185	0.2420749279538905	.	UCAGACUAGCAACAUGAUCUUCGGUGACAGU	19	4	315	1	1	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1133495-1133918	Cluster_6251	Pocillopora_meandrina_HIv1___Sc0000026	1133495	1133918	424	205	91	0.05853658536585366	-	UCAAAAGCUGCCGAUAAAUCUAAA	40	2	145	1	3	3	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1138806-1139366	Cluster_6252	Pocillopora_meandrina_HIv1___Sc0000026	1138806	1139366	561	384	142	0.0390625	-	UCUAUUUUCUUCUCGGUGCCGAUGACGUGU	32	16	361	2	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1142826-1143245	Cluster_6253	Pocillopora_meandrina_HIv1___Sc0000026	1142826	1143245	420	177	72	0.011299435028248588	-	UGUAUCUUCGUCCGUGUUCCAUUUGACUC	27	2	164	2	4	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1143715-1144144	Cluster_6254	Pocillopora_meandrina_HIv1___Sc0000026	1143715	1144144	430	317	82	0.006309148264984227	-	UGAAUUCGUAGUGCUCGUCGUAGAUCAUGA	133	7	291	17	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1154719-1154813	Cluster_6255	Pocillopora_meandrina_HIv1___Sc0000026	1154719	1154813	95	23691	166	0.0	-	UAAGAUCAAGUUCAUGGUAUUCU	13847	97	52	26	598	22466	452	23	Y	NA
Pocillopora_meandrina_HIv1___Sc0000026:1240547-1240965	Cluster_6256	Pocillopora_meandrina_HIv1___Sc0000026	1240547	1240965	419	429	62	0.1445221445221445	-	CGGCCUGAAAAAAAAAA	151	364	27	19	6	5	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1299033-1299450	Cluster_6257	Pocillopora_meandrina_HIv1___Sc0000026	1299033	1299450	418	23422	40	0.9999573050977714	+	CGGCCUGAAAAAAAAA	18263	23422	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1327345-1327760	Cluster_6258	Pocillopora_meandrina_HIv1___Sc0000026	1327345	1327760	416	248	9	0.0	-	GCUGGAUGAUGAGACC	231	248	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1413056-1413485	Cluster_6259	Pocillopora_meandrina_HIv1___Sc0000026	1413056	1413485	430	1555	137	0.003215434083601286	-	UCUUUCGGUCACGUGGGCUUCAAACGCGU	541	5	1540	2	1	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1577564-1577980	Cluster_6260	Pocillopora_meandrina_HIv1___Sc0000026	1577564	1577980	417	520	33	0.9980769230769231	+	CCGUGGAAGGUAGGC	297	515	4	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1606997-1608102	Cluster_6261	Pocillopora_meandrina_HIv1___Sc0000026	1606997	1608102	1106	1283	820	0.002338269680436477	-	CUUGACGAUUGUUUUGGGUUUCACU	28	425	505	75	85	94	99	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1610525-1610928	Cluster_6262	Pocillopora_meandrina_HIv1___Sc0000026	1610525	1610928	404	188	134	0.0	-	GAGGAGCAGAAUCAGACA	10	85	40	26	16	9	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1613405-1613814	Cluster_6263	Pocillopora_meandrina_HIv1___Sc0000026	1613405	1613814	410	139	97	0.014388489208633094	-	AGAGAGAAAAUGUCACGUUGUGGAAUGAGCU	11	54	61	5	4	6	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1614939-1615346	Cluster_6264	Pocillopora_meandrina_HIv1___Sc0000026	1614939	1615346	408	147	103	0.006802721088435374	-	GGGGUCUGCGAUCUGAGAAA	6	55	46	9	10	17	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1616657-1617081	Cluster_6265	Pocillopora_meandrina_HIv1___Sc0000026	1616657	1617081	425	284	203	0.0035211267605633804	-	AAUGCCGAUGAAGACUGGAGACGGAGAUU	7	96	101	25	25	19	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1842927-1843348	Cluster_6266	Pocillopora_meandrina_HIv1___Sc0000026	1842927	1843348	422	151	72	0.9933774834437086	+	CAAAGAACUGAGCACAGA	12	64	42	14	15	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1905946-1906379	Cluster_6267	Pocillopora_meandrina_HIv1___Sc0000026	1905946	1906379	434	456	215	0.16885964912280702	-	UAUGACGUUCCAGAAUCUUUGACAAAA	40	8	424	3	7	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1906917-1907345	Cluster_6268	Pocillopora_meandrina_HIv1___Sc0000026	1906917	1907345	429	132	43	0.030303030303030304	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	22	3	129	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1937549-1937964	Cluster_6269	Pocillopora_meandrina_HIv1___Sc0000026	1937549	1937964	416	239	64	0.9581589958158996	+	UGUAUCCCAACCAAGU	147	151	80	0	0	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:1997710-1998125	Cluster_6270	Pocillopora_meandrina_HIv1___Sc0000026	1997710	1998125	416	177	12	0.02824858757062147	-	GGGUGUGCUCUUAACC	109	174	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2020697-2021125	Cluster_6271	Pocillopora_meandrina_HIv1___Sc0000026	2020697	2021125	429	183	52	0.9890710382513661	+	GUUUCCGUAGUGUAGUGGUUAUCACGUGC	50	56	112	5	4	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2099923-2100397	Cluster_6272	Pocillopora_meandrina_HIv1___Sc0000026	2099923	2100397	475	5321	500	0.009396729937981583	-	GCCCGGUUAGCUCAGUCGGUAGAGCAUC	1059	1503	3646	27	76	44	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2270068-2270496	Cluster_6273	Pocillopora_meandrina_HIv1___Sc0000026	2270068	2270496	429	102	31	1.0	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	35	0	101	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2272756-2273165	Cluster_6274	Pocillopora_meandrina_HIv1___Sc0000026	2272756	2273165	410	78	35	0.21794871794871795	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	23	0	75	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2274567-2274996	Cluster_6275	Pocillopora_meandrina_HIv1___Sc0000026	2274567	2274996	430	200	45	0.975	+	UGGAGAUGGAAUCAAGAAAUGCAAAACAGG	68	6	182	1	4	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2275173-2275598	Cluster_6276	Pocillopora_meandrina_HIv1___Sc0000026	2275173	2275598	426	217	43	0.16589861751152074	-	UAGUUUGAAAAGAUAUCGCUCAGUG	92	4	202	5	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2496420-2496840	Cluster_6277	Pocillopora_meandrina_HIv1___Sc0000026	2496420	2496840	421	146	17	0.0	-	AAAGUUCUGGUUUAAAAAAAAA	39	61	1	30	43	11	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2593187-2593614	Cluster_6278	Pocillopora_meandrina_HIv1___Sc0000026	2593187	2593614	428	297	34	0.9966329966329966	+	AACUACUGCUCGUACUCUAGAUAUGACA	84	15	281	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2699237-2699665	Cluster_6279	Pocillopora_meandrina_HIv1___Sc0000026	2699237	2699665	429	421	58	0.009501187648456057	-	UGACCGGUUUGCCCGACUGAAUAUCUCUC	219	4	412	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2700106-2700534	Cluster_6280	Pocillopora_meandrina_HIv1___Sc0000026	2700106	2700534	429	166	43	0.006024096385542169	-	UUGGAUAAAUUGGGUGUUAGUGAGAAGCC	43	3	163	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2809839-2810254	Cluster_6281	Pocillopora_meandrina_HIv1___Sc0000026	2809839	2810254	416	140	14	0.9642857142857143	+	UCCCAAGGAUGAAGAA	95	134	5	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2854077-2854491	Cluster_6282	Pocillopora_meandrina_HIv1___Sc0000026	2854077	2854491	415	136	29	0.19852941176470587	-	AAGUGUGCUCUUAACC	42	112	23	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2854799-2855381	Cluster_6283	Pocillopora_meandrina_HIv1___Sc0000026	2854799	2855381	583	1668	264	0.9808153477218226	+	UUUGAUCUUGAAAUUAUGAUACCUGGAAA	511	7	1631	3	5	16	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2855709-2856305	Cluster_6284	Pocillopora_meandrina_HIv1___Sc0000026	2855709	2856305	597	5467	507	0.9968904335101518	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	858	17	5407	2	5	9	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2858479-2858891	Cluster_6285	Pocillopora_meandrina_HIv1___Sc0000026	2858479	2858891	413	98	46	0.9897959183673469	+	AGUUUCUUACUUCGGACAUCAAAUUUUGU	15	5	92	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2861063-2861801	Cluster_6286	Pocillopora_meandrina_HIv1___Sc0000026	2861063	2861801	739	1678	274	0.9970202622169249	+	UAACGAGAUUAAAACGACAAUGAACAAUAUA	384	14	1653	0	3	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2861901-2863409	Cluster_6287	Pocillopora_meandrina_HIv1___Sc0000026	2861901	2863409	1509	7938	628	0.999748047367095	+	UCUGGAAAAUUUUCAGCGUGUGGGCAUCUC	2667	18	7866	7	12	14	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2864434-2864857	Cluster_6288	Pocillopora_meandrina_HIv1___Sc0000026	2864434	2864857	424	232	116	0.9956896551724138	+	UUAGAGACACGAGCUGAACUCCAUUGUAGC	19	6	224	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2864896-2865622	Cluster_6289	Pocillopora_meandrina_HIv1___Sc0000026	2864896	2865622	727	399	159	0.9949874686716792	+	UUUUGUUACAAGAAUCGAUCUGUGGUUCCAC	33	4	391	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2865714-2866301	Cluster_6290	Pocillopora_meandrina_HIv1___Sc0000026	2865714	2866301	588	471	150	0.9957537154989384	+	UUUUCCCAUAUCUAGGAUUAAAUAUCUAU	123	15	448	2	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2866335-2866990	Cluster_6291	Pocillopora_meandrina_HIv1___Sc0000026	2866335	2866990	656	5338	555	0.9992506556762832	+	UGAAAUGACUCUCGGUACAGGACCAUGUG	1000	36	5243	13	6	5	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2867361-2867821	Cluster_6292	Pocillopora_meandrina_HIv1___Sc0000026	2867361	2867821	461	1092	149	0.9981684981684982	+	UUAUAAGCUUGUGAUCGUUUAUCCAACUGGC	371	22	1061	4	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2867919-2868544	Cluster_6293	Pocillopora_meandrina_HIv1___Sc0000026	2867919	2868544	626	2081	188	1.0	+	UGCAACUUGCCGUCCAUUGUAAAGAACGAU	1129	6	2061	0	7	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2874318-2875769	Cluster_6294	Pocillopora_meandrina_HIv1___Sc0000026	2874318	2875769	1452	12405	1427	0.9854091092301491	+	UCCGAUCCCUGAUCUAAUCCCUGACCCGA	1659	187	11956	29	53	116	64	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:2877087-2877596	Cluster_6295	Pocillopora_meandrina_HIv1___Sc0000026	2877087	2877596	510	433	96	0.9330254041570438	+	UUGGUUCCCUCUUCCACUAGAUGGUAAGU	69	48	369	4	6	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3143476-3144415	Cluster_6296	Pocillopora_meandrina_HIv1___Sc0000026	3143476	3144415	940	890	396	0.8707865168539326	+	UUCGAUCUUUUCUGUGUAAUGUGUAGCCG	33	9	802	3	7	29	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3240248-3240674	Cluster_6297	Pocillopora_meandrina_HIv1___Sc0000026	3240248	3240674	427	153	19	0.0	-	UGAAACUCUGAUCUGAAAACAUUUGUC	57	2	151	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3383355-3383785	Cluster_6298	Pocillopora_meandrina_HIv1___Sc0000026	3383355	3383785	431	543	81	0.994475138121547	+	AAUUAAAUGUAUAAACGAAAAUAGUAGAAU	100	10	524	2	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3714299-3714726	Cluster_6299	Pocillopora_meandrina_HIv1___Sc0000026	3714299	3714726	428	100	26	0.0	-	AGUCAUUUCGAAACAUGGACAACUGGGU	31	2	96	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3864683-3865111	Cluster_6300	Pocillopora_meandrina_HIv1___Sc0000026	3864683	3865111	429	194	38	0.0	-	AGGAUGGACUGUGUUCCAGAAGAGACUG	45	11	178	0	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3907219-3907656	Cluster_6301	Pocillopora_meandrina_HIv1___Sc0000026	3907219	3907656	438	578	200	0.9844290657439446	+	CCCGCCGGGGAGCCA	68	160	345	3	42	12	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:3912046-3912474	Cluster_6302	Pocillopora_meandrina_HIv1___Sc0000026	3912046	3912474	429	301	94	0.292358803986711	.	GACGCGUAUAAUGUAGCUCUGGUUGAGG	52	16	264	11	1	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4115811-4116237	Cluster_6303	Pocillopora_meandrina_HIv1___Sc0000026	4115811	4116237	427	107	44	0.9626168224299065	+	AGGAUGGACAGUGUUUCAGAAGAGACUGG	13	10	84	2	5	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4340247-4340654	Cluster_6304	Pocillopora_meandrina_HIv1___Sc0000026	4340247	4340654	408	181	119	0.011049723756906077	-	AAAUCGGCCGUGGAUU	11	113	42	12	6	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4542219-4542774	Cluster_6305	Pocillopora_meandrina_HIv1___Sc0000026	4542219	4542774	556	5321	391	0.2601014846833302	.	UCCGGUGUAAAAUAAAACAGAAGCAUU	1256	85	4495	351	32	108	250	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4570036-4570464	Cluster_6306	Pocillopora_meandrina_HIv1___Sc0000026	4570036	4570464	429	391	45	0.005115089514066497	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	289	3	388	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4606865-4607294	Cluster_6307	Pocillopora_meandrina_HIv1___Sc0000026	4606865	4607294	430	288	94	0.9826388888888888	+	UGUAAAGACGUUUUGAGGCUUUGGAGACA	58	3	279	1	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4661408-4661833	Cluster_6308	Pocillopora_meandrina_HIv1___Sc0000026	4661408	4661833	426	132	64	0.03787878787878788	-	UGCUCGAUUAAUUUGGACAAAGUGUCAUCUC	11	3	127	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4824249-4824664	Cluster_6309	Pocillopora_meandrina_HIv1___Sc0000026	4824249	4824664	416	161	17	1.0	+	UGCAAAUCGAUCGUCA	105	161	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4829174-4829590	Cluster_6310	Pocillopora_meandrina_HIv1___Sc0000026	4829174	4829590	417	237	11	0.0	-	AGCGUGCUCUUAACU	91	237	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4831712-4832128	Cluster_6311	Pocillopora_meandrina_HIv1___Sc0000026	4831712	4832128	417	212	10	0.0	-	AGCGUGCUCUUAACU	79	212	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4836278-4836694	Cluster_6312	Pocillopora_meandrina_HIv1___Sc0000026	4836278	4836694	417	228	16	0.008771929824561403	-	AGCGUGCUCUUAACU	80	228	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4840641-4841057	Cluster_6313	Pocillopora_meandrina_HIv1___Sc0000026	4840641	4841057	417	232	8	0.0	-	AGCGUGCUCUUAACU	89	232	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4894731-4895145	Cluster_6314	Pocillopora_meandrina_HIv1___Sc0000026	4894731	4895145	415	95	27	0.9894736842105263	+	GGCCGGGAGGUGGGGGG	39	93	0	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:4918463-4918885	Cluster_6315	Pocillopora_meandrina_HIv1___Sc0000026	4918463	4918885	423	155	30	0.9935483870967742	+	UUCGCGUCUGAAGCUGUUAGAGU	76	18	2	2	13	120	0	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5244402-5244920	Cluster_6316	Pocillopora_meandrina_HIv1___Sc0000026	5244402	5244920	519	3222	320	0.999689633767846	+	GUUGUCAGUCAACUCUCAAACAUCU	1078	153	2575	36	322	64	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5310165-5311667	Cluster_6317	Pocillopora_meandrina_HIv1___Sc0000026	5310165	5311667	1503	1726	756	0.04055619930475087	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	57	15	1614	7	23	25	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5321896-5322314	Cluster_6318	Pocillopora_meandrina_HIv1___Sc0000026	5321896	5322314	419	706	74	0.018413597733711047	-	GAUGGAUGGAGACUGCUC	132	695	5	2	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5391496-5391926	Cluster_6319	Pocillopora_meandrina_HIv1___Sc0000026	5391496	5391926	431	41230	415	0.9999757458161533	+	GCACUGGUGGUUCAGUGGUAGAAUUCUC	12814	36	41102	0	5	7	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5482131-5482553	Cluster_6320	Pocillopora_meandrina_HIv1___Sc0000026	5482131	5482553	423	157	41	0.9936305732484076	+	UAACGUCAACUUCUUGUCUCUAGA	45	13	18	11	2	57	56	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000026:5486208-5486634	Cluster_6321	Pocillopora_meandrina_HIv1___Sc0000026	5486208	5486634	427	727	148	1.0	+	GCAAAAUGAUGAAGAACCAUGGGC	144	62	124	35	41	102	363	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:222628-223057	Cluster_6322	Pocillopora_meandrina_HIv1___Sc0000027	222628	223057	430	224	21	1.0	+	UUAUAACCGAGUGUGCCUUAUAACCGAAU	100	0	224	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:242475-242889	Cluster_6323	Pocillopora_meandrina_HIv1___Sc0000027	242475	242889	415	92	20	0.03260869565217391	-	UUUGUUCUAAGAUUUGC	31	89	1	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:433322-433863	Cluster_6324	Pocillopora_meandrina_HIv1___Sc0000027	433322	433863	542	6003	805	0.0004997501249375312	-	GGUGACCCGCUUACUUCUGCG	705	2984	1194	1338	205	176	106	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:440347-440761	Cluster_6325	Pocillopora_meandrina_HIv1___Sc0000027	440347	440761	415	160	55	0.96875	+	GAGGUCCGGACGGGG	83	131	13	2	5	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:489845-490265	Cluster_6326	Pocillopora_meandrina_HIv1___Sc0000027	489845	490265	421	265	190	0.9886792452830189	+	CAUGACCCUGGACGCGGUGCACCGUU	6	113	61	27	16	21	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:490699-491360	Cluster_6327	Pocillopora_meandrina_HIv1___Sc0000027	490699	491360	662	429	286	0.9976689976689976	+	GAGGGAACUAUUGUCUGCAAU	27	165	95	65	34	46	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:633030-635072	Cluster_6328	Pocillopora_meandrina_HIv1___Sc0000027	633030	635072	2043	9467	1645	0.02049223618886659	-	UACGAGCGAUAGAUCUUAAGCAUGUGCUGC	894	32	8673	107	41	83	531	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:639475-639959	Cluster_6329	Pocillopora_meandrina_HIv1___Sc0000027	639475	639959	485	2600	335	0.06307692307692307	-	UAGGCGUUAAACUUUCAUUGAUAA	832	23	1614	3	4	17	939	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:661511-662214	Cluster_6330	Pocillopora_meandrina_HIv1___Sc0000027	661511	662214	704	3941	741	0.9515351433646283	+	UUCAUCGGGAUCUCCUAAAAUAAGUGG	766	18	3808	9	14	38	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:662408-662994	Cluster_6331	Pocillopora_meandrina_HIv1___Sc0000027	662408	662994	587	556	228	0.5251798561151079	.	CAGGAAUGUAGUGCUGAACAACCA	30	7	400	20	6	56	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:663455-663885	Cluster_6332	Pocillopora_meandrina_HIv1___Sc0000027	663455	663885	431	251	101	0.8446215139442231	+	UGAAGUAUAGAACAACAACAUCCCAACCAGG	20	5	207	0	3	35	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:665653-666080	Cluster_6333	Pocillopora_meandrina_HIv1___Sc0000027	665653	666080	428	93	24	0.978494623655914	+	UGAACAGAGGUAAAUCUUCGUACAUGAAUGA	47	2	91	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:698437-698866	Cluster_6334	Pocillopora_meandrina_HIv1___Sc0000027	698437	698866	430	154	39	0.01948051948051948	-	UGUACUGUGAACAUAGUGUUACCAACCAUU	76	0	152	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:704407-704834	Cluster_6335	Pocillopora_meandrina_HIv1___Sc0000027	704407	704834	428	185	63	0.6486486486486487	.	UUGUCUACAAGAAGCUUGACCAUUUUGU	51	7	168	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:764669-765087	Cluster_6336	Pocillopora_meandrina_HIv1___Sc0000027	764669	765087	419	274	177	0.9927007299270073	+	AAGAACCCCUGAGCGCGG	21	149	63	19	11	18	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:765966-766467	Cluster_6337	Pocillopora_meandrina_HIv1___Sc0000027	765966	766467	502	815	461	0.9914110429447853	+	CAUAGCGUGAACUCAAGAGAGCU	54	226	291	34	46	148	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:783466-783891	Cluster_6338	Pocillopora_meandrina_HIv1___Sc0000027	783466	783891	426	103	32	0.009708737864077669	-	UGUGUAGAUAUGUCUUUUGGACAGGA	32	1	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:802361-802789	Cluster_6339	Pocillopora_meandrina_HIv1___Sc0000027	802361	802789	429	2216	81	0.9986462093862816	+	UCUUGGACUGCCAGAGAACUUUGAGCAUU	1351	22	2185	3	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:837534-837952	Cluster_6340	Pocillopora_meandrina_HIv1___Sc0000027	837534	837952	419	131	45	0.022900763358778626	-	UAGGGAUUGGAGGGU	20	78	4	8	28	13	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:890314-890729	Cluster_6341	Pocillopora_meandrina_HIv1___Sc0000027	890314	890729	416	205	15	0.004878048780487805	-	AUUCUAUUUUGUUGGU	182	205	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:953118-953545	Cluster_6342	Pocillopora_meandrina_HIv1___Sc0000027	953118	953545	428	111	37	0.018018018018018018	-	UGAAACGUGUUGCUGAACGCUUGUUGUAG	17	1	109	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:953647-954075	Cluster_6343	Pocillopora_meandrina_HIv1___Sc0000027	953647	954075	429	114	23	0.043859649122807015	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	49	1	112	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1050277-1050697	Cluster_6344	Pocillopora_meandrina_HIv1___Sc0000027	1050277	1050697	421	151	55	0.0	-	AACUGGUGCACUUGUAGUGGGUGAUC	54	7	132	3	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1055663-1056079	Cluster_6345	Pocillopora_meandrina_HIv1___Sc0000027	1055663	1056079	417	310	46	0.07096774193548387	-	UAGUGUGCUCUUAACUA	116	267	41	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1068731-1069156	Cluster_6346	Pocillopora_meandrina_HIv1___Sc0000027	1068731	1069156	426	107	36	0.009345794392523364	-	UGCCGAAAGAGGAGAGAUUGCCCUGU	14	1	100	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1198676-1199103	Cluster_6347	Pocillopora_meandrina_HIv1___Sc0000027	1198676	1199103	428	229	88	0.9606986899563319	+	UAAAGACUCAUCAUGACAAUCGGUCAGA	38	9	206	3	1	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1397486-1398306	Cluster_6348	Pocillopora_meandrina_HIv1___Sc0000027	1397486	1398306	821	3486	1593	0.0017211703958691911	-	CUUGUCAAUGAUAAAAGUUCUACCCA	59	1299	1261	267	214	260	185	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1400735-1401245	Cluster_6349	Pocillopora_meandrina_HIv1___Sc0000027	1400735	1401245	511	737	412	0.0	-	GAUCUGGAGAAACAUGUUAAUGAAU	18	326	206	53	53	54	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1401646-1402540	Cluster_6350	Pocillopora_meandrina_HIv1___Sc0000027	1401646	1402540	895	3910	1384	0.006138107416879796	-	ACAGUGAUUGAACGAGGCA	179	1746	830	413	393	303	225	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1405676-1406712	Cluster_6351	Pocillopora_meandrina_HIv1___Sc0000027	1405676	1406712	1037	1085	790	0.0009216589861751152	-	AUUUAGGUCUGGGAACAGUGUAUCC	11	363	414	67	94	85	62	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1406775-1407194	Cluster_6352	Pocillopora_meandrina_HIv1___Sc0000027	1406775	1407194	420	205	107	0.0	-	UUAGAAAAAGACGUGUACCA	26	125	32	28	8	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1408831-1409253	Cluster_6353	Pocillopora_meandrina_HIv1___Sc0000027	1408831	1409253	423	163	125	0.0	-	UGUGGACAAAGUGUGAAAUGCA	3	48	62	7	18	14	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1541116-1541543	Cluster_6354	Pocillopora_meandrina_HIv1___Sc0000027	1541116	1541543	428	344	74	0.0	-	CUCGUGGCUGUCAGGUUCGCUGUGCUGU	54	49	169	54	15	48	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1658367-1658797	Cluster_6355	Pocillopora_meandrina_HIv1___Sc0000027	1658367	1658797	431	383	82	0.06266318537859007	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	131	8	362	3	3	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1662174-1662991	Cluster_6356	Pocillopora_meandrina_HIv1___Sc0000027	1662174	1662991	818	676	159	0.03698224852071006	-	UACUAGAAUCUAACGAACAGCUCGAACACU	71	40	610	1	2	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1668827-1669254	Cluster_6357	Pocillopora_meandrina_HIv1___Sc0000027	1668827	1669254	428	275	38	0.03272727272727273	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	133	0	271	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1769526-1769940	Cluster_6358	Pocillopora_meandrina_HIv1___Sc0000027	1769526	1769940	415	91	34	0.9560439560439561	+	CCUGUGCAAUUUUGUUGUC	18	54	20	1	3	10	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1772385-1772801	Cluster_6359	Pocillopora_meandrina_HIv1___Sc0000027	1772385	1772801	417	212	44	0.018867924528301886	-	GACUUUGGUGGAGAUG	38	204	1	0	4	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1871789-1872212	Cluster_6360	Pocillopora_meandrina_HIv1___Sc0000027	1871789	1872212	424	2207	100	0.9977344811961939	+	UAGUUUUGAUUGUUGACAGCGUU	999	84	11	26	407	1534	145	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1874812-1875227	Cluster_6361	Pocillopora_meandrina_HIv1___Sc0000027	1874812	1875227	416	92	11	0.0	-	UAUAUCAGAACGGAAU	32	92	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1884809-1885224	Cluster_6362	Pocillopora_meandrina_HIv1___Sc0000027	1884809	1885224	416	177	25	0.01694915254237288	-	CGCCUUCCGGACCUC	65	175	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1963239-1963651	Cluster_6363	Pocillopora_meandrina_HIv1___Sc0000027	1963239	1963651	413	149	101	0.026845637583892617	-	GUAGUCGAGCUGUAGUUUGCA	5	51	50	11	10	15	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1965564-1966263	Cluster_6364	Pocillopora_meandrina_HIv1___Sc0000027	1965564	1966263	700	750	510	0.008	-	GAGGGCAAUUGUAGUCGAGCU	13	234	293	61	54	59	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1970770-1971419	Cluster_6365	Pocillopora_meandrina_HIv1___Sc0000027	1970770	1971419	650	1550	733	0.005161290322580645	-	CAUCGAUGUAGAAAUAAAUGUAACACUUUU	18	536	618	115	97	98	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1974267-1974685	Cluster_6366	Pocillopora_meandrina_HIv1___Sc0000027	1974267	1974685	419	347	221	0.01440922190201729	-	GCAAAAGGGACGAAGA	16	172	74	21	38	22	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1977430-1977831	Cluster_6367	Pocillopora_meandrina_HIv1___Sc0000027	1977430	1977831	402	161	121	0.012422360248447204	-	CUUCACAAGGACUGAUGUGUUCC	6	41	58	15	14	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1981425-1981877	Cluster_6368	Pocillopora_meandrina_HIv1___Sc0000027	1981425	1981877	453	342	246	0.008771929824561403	-	CAGUUAGGACACGUUGCGCAU	8	107	126	26	32	28	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:1981889-1982310	Cluster_6369	Pocillopora_meandrina_HIv1___Sc0000027	1981889	1982310	422	184	112	0.010869565217391304	-	GACGACUGUGUACUGCUGU	10	85	58	11	12	11	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2333763-2334178	Cluster_6370	Pocillopora_meandrina_HIv1___Sc0000027	2333763	2334178	416	350	10	0.002857142857142857	-	CGGACCUCAGAUCCGG	230	348	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2334838-2335266	Cluster_6371	Pocillopora_meandrina_HIv1___Sc0000027	2334838	2335266	429	190	54	1.0	+	UCUGACGAGAAACGAGCUUUCCCAAAAUC	59	4	182	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2343596-2344207	Cluster_6372	Pocillopora_meandrina_HIv1___Sc0000027	2343596	2344207	612	516	155	0.9631782945736435	+	UAAUGCUGCUUAAUUCUUCCUCCAAUAGGA	96	8	493	2	6	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2345299-2345713	Cluster_6373	Pocillopora_meandrina_HIv1___Sc0000027	2345299	2345713	415	127	59	0.84251968503937	+	UUGAAUGUUUUCUGCACUGUAGAGAAGAC	18	6	107	0	6	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2346269-2346696	Cluster_6374	Pocillopora_meandrina_HIv1___Sc0000027	2346269	2346696	428	240	128	0.7791666666666667	.	UGAACUACACGAGGAACUAGACGAACUUUAC	12	14	199	0	4	8	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2449992-2450524	Cluster_6375	Pocillopora_meandrina_HIv1___Sc0000027	2449992	2450524	533	1191	268	0.8648194794290512	+	UUAUUUCUACAUAGAGCGAGCUCACAUC	512	65	1056	17	11	37	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2497199-2497614	Cluster_6376	Pocillopora_meandrina_HIv1___Sc0000027	2497199	2497614	416	183	61	0.06557377049180328	-	UGUAUCCCAACCAAGU	97	102	69	1	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2691298-2691725	Cluster_6377	Pocillopora_meandrina_HIv1___Sc0000027	2691298	2691725	428	91	19	0.967032967032967	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	41	1	88	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2889739-2890161	Cluster_6378	Pocillopora_meandrina_HIv1___Sc0000027	2889739	2890161	423	322	68	0.046583850931677016	-	UUCGCGUCUGAAGCUGUUAGAGU	126	24	16	12	53	210	7	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2974520-2974943	Cluster_6379	Pocillopora_meandrina_HIv1___Sc0000027	2974520	2974943	424	163	18	0.9938650306748467	+	UUUGAACUCCUAAGAUCUGAUUGU	97	1	6	1	0	2	153	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2994565-2994993	Cluster_6380	Pocillopora_meandrina_HIv1___Sc0000027	2994565	2994993	429	199	62	0.2663316582914573	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	35	1	166	1	1	2	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2995725-2996153	Cluster_6381	Pocillopora_meandrina_HIv1___Sc0000027	2995725	2996153	429	230	111	0.1	-	UGAAAGAACUUUCAUGAUGCGUUUUACCU	19	5	205	3	1	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:2996504-2996923	Cluster_6382	Pocillopora_meandrina_HIv1___Sc0000027	2996504	2996923	420	315	190	0.050793650793650794	-	UCAGACACGUGGAUACUUGCGAUGAAGU	22	1	295	1	3	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3271772-3272346	Cluster_6383	Pocillopora_meandrina_HIv1___Sc0000027	3271772	3272346	575	910	266	0.14835164835164835	-	UAAGUAACAUUUGUUUUCGGCGUGCAGA	129	11	860	1	1	17	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3272708-3273120	Cluster_6384	Pocillopora_meandrina_HIv1___Sc0000027	3272708	3273120	413	247	126	0.1700404858299595	-	UGAACUUAACGACACCUAGAUCUGCACA	13	8	212	3	7	4	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3273423-3274148	Cluster_6385	Pocillopora_meandrina_HIv1___Sc0000027	3273423	3274148	726	1013	245	0.16781836130306022	-	UAACUCCGAUCCGAUGACCUAGAAAGUC	148	6	948	7	5	10	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3274796-3275472	Cluster_6386	Pocillopora_meandrina_HIv1___Sc0000027	3274796	3275472	677	256	145	0.125	-	UGACAUGUCGAAACCCGUAAUCUAAAGU	18	5	230	5	4	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3402621-3403050	Cluster_6387	Pocillopora_meandrina_HIv1___Sc0000027	3402621	3403050	430	336	108	0.9464285714285714	+	UAGUAUAACUUUGAUCUGAUGAAAAUC	71	1	327	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3414587-3415537	Cluster_6388	Pocillopora_meandrina_HIv1___Sc0000027	3414587	3415537	951	2907	590	0.9253525971792226	+	UGACUCCUUUCAAUCUGGCACAACCC	385	65	2646	35	27	75	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3747916-3748344	Cluster_6389	Pocillopora_meandrina_HIv1___Sc0000027	3747916	3748344	429	271	76	0.0	-	AAGGAAACCGAUCAGUUUAGACUCACAUU	109	6	258	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3929345-3929772	Cluster_6390	Pocillopora_meandrina_HIv1___Sc0000027	3929345	3929772	428	178	77	0.9775280898876404	+	UUACUUCUGAUAUAUGACUGUUCCAGGU	25	3	168	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3931257-3932300	Cluster_6391	Pocillopora_meandrina_HIv1___Sc0000027	3931257	3932300	1044	709	349	0.7588152327221439	.	UCUUCCUGUUCUGUACUGAAACCAGUC	24	5	664	5	3	17	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3932560-3932990	Cluster_6392	Pocillopora_meandrina_HIv1___Sc0000027	3932560	3932990	431	633	224	0.8988941548183255	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	83	3	533	4	7	7	79	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:3973506-3973954	Cluster_6393	Pocillopora_meandrina_HIv1___Sc0000027	3973506	3973954	449	2601	172	0.839677047289504	+	UCCAUCUUCACCUAUUCUUGCACUGCU	477	13	2525	3	16	13	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4051379-4051821	Cluster_6394	Pocillopora_meandrina_HIv1___Sc0000027	4051379	4051821	443	486	147	0.14814814814814814	-	UAGGAACCAAAUACUUUCACAGUAAAGC	93	7	433	5	2	29	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4138015-4138983	Cluster_6395	Pocillopora_meandrina_HIv1___Sc0000027	4138015	4138983	969	1360	396	0.14926470588235294	-	UCACAGGUAUAUAUUCUAUCGCUCUUCAAC	81	24	1229	9	5	38	55	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4142855-4143281	Cluster_6396	Pocillopora_meandrina_HIv1___Sc0000027	4142855	4143281	427	119	24	1.0	+	UAAAAGCUCCUGUGCAACCUGCACUGA	55	1	118	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4191637-4192761	Cluster_6397	Pocillopora_meandrina_HIv1___Sc0000027	4191637	4192761	1125	2177	585	0.06522737712448323	-	UCGUAUGAAAUGAGCUUCUGAACUAGGA	229	22	2063	3	10	20	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4311001-4311455	Cluster_6398	Pocillopora_meandrina_HIv1___Sc0000027	4311001	4311455	455	189	67	0.0	-	AAGGAAACGGAUCGGUUUAGACUCACAUU	36	9	146	9	2	17	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4356950-4357770	Cluster_6399	Pocillopora_meandrina_HIv1___Sc0000027	4356950	4357770	821	1384	194	0.15895953757225434	-	UAAUCGUUGGCUUUUUCUCGAGGCGGG	281	108	1237	6	9	19	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4585570-4587589	Cluster_6400	Pocillopora_meandrina_HIv1___Sc0000027	4585570	4587589	2020	6440	1717	0.21366459627329193	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	440	256	5718	22	42	169	233	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4588481-4588903	Cluster_6401	Pocillopora_meandrina_HIv1___Sc0000027	4588481	4588903	423	204	110	0.22058823529411764	.	UCCGCUACGUUUUGCUCUCCUGGGACGUGU	11	4	186	3	0	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4589618-4590375	Cluster_6402	Pocillopora_meandrina_HIv1___Sc0000027	4589618	4590375	758	915	335	0.048087431693989074	-	UGUGUGUCUGAAUGGUCCUUGUGGAACA	63	8	892	0	1	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4691830-4692243	Cluster_6403	Pocillopora_meandrina_HIv1___Sc0000027	4691830	4692243	414	200	140	0.995	+	CGCGGUGCUUCGGAAGA	6	102	51	13	14	14	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4692661-4693174	Cluster_6404	Pocillopora_meandrina_HIv1___Sc0000027	4692661	4693174	514	333	251	0.996996996996997	+	AUCGUGCUGUCAUGUGGAC	8	98	130	27	21	29	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4723163-4723578	Cluster_6405	Pocillopora_meandrina_HIv1___Sc0000027	4723163	4723578	416	104	6	1.0	+	CGUGGAUUGGCCCAGCC	65	104	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4746753-4747703	Cluster_6406	Pocillopora_meandrina_HIv1___Sc0000027	4746753	4747703	951	2448	476	0.997140522875817	+	UCGUUUGUUCCGAGGAUAAGAUGUACGGG	442	47	2369	8	3	12	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4756637-4757053	Cluster_6407	Pocillopora_meandrina_HIv1___Sc0000027	4756637	4757053	417	115	24	0.043478260869565216	-	GUCCUGGCAGGGUCGCCA	46	110	2	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4766494-4766910	Cluster_6408	Pocillopora_meandrina_HIv1___Sc0000027	4766494	4766910	417	1126	33	0.0008880994671403197	-	CUUUCCGAGGUCGAG	979	1125	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:4943975-4944393	Cluster_6409	Pocillopora_meandrina_HIv1___Sc0000027	4943975	4944393	419	1172	72	1.0	+	UGCCCGGGUCCUCCACCA	528	1148	24	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:5348420-5348854	Cluster_6410	Pocillopora_meandrina_HIv1___Sc0000027	5348420	5348854	435	360	64	0.002777777777777778	-	UGUGUCUAAUGUUGUCGAACGCCCCGCA	112	2	346	4	2	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000027:5491142-5492079	Cluster_6411	Pocillopora_meandrina_HIv1___Sc0000027	5491142	5492079	938	667	331	0.13493253373313344	-	UUCGAUCUUUUCUGUGUAAUGUGUAGC	24	20	590	6	4	8	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:96302-96724	Cluster_6412	Pocillopora_meandrina_HIv1___Sc0000028	96302	96724	423	159	49	0.16981132075471697	-	AAUCUCUUUAAGCAUGGACCUGG	42	0	40	1	0	75	43	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:213783-214226	Cluster_6413	Pocillopora_meandrina_HIv1___Sc0000028	213783	214226	444	375	295	0.9973333333333333	+	GACAUCAAAGAGAAGCUCUGUUA	5	128	133	30	24	29	31	N	N	gga-miR-3533
Pocillopora_meandrina_HIv1___Sc0000028:215953-216389	Cluster_6414	Pocillopora_meandrina_HIv1___Sc0000028	215953	216389	437	494	335	0.9959514170040485	+	GAACUGUGAGUAUACUGAAGGU	8	171	158	48	52	35	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:217988-218637	Cluster_6415	Pocillopora_meandrina_HIv1___Sc0000028	217988	218637	650	834	548	0.9988009592326139	+	AGAAGGAAAUCACUGCUCUGGCU	17	278	285	66	87	73	45	N	N	gga-miR-3533
Pocillopora_meandrina_HIv1___Sc0000028:407248-407667	Cluster_6416	Pocillopora_meandrina_HIv1___Sc0000028	407248	407667	420	97	33	0.0	-	UUUUUCACGCAUGUUGUUAUGG	16	11	1	6	50	26	3	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:512013-512673	Cluster_6417	Pocillopora_meandrina_HIv1___Sc0000028	512013	512673	661	767	487	0.9986962190352021	+	GAAGAACGUGUGUAGUAAAACCUA	23	284	240	54	65	57	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:526854-527269	Cluster_6418	Pocillopora_meandrina_HIv1___Sc0000028	526854	527269	416	122	10	0.9918032786885246	+	GCGGGAAUAGCUCAGC	88	121	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:535351-535780	Cluster_6419	Pocillopora_meandrina_HIv1___Sc0000028	535351	535780	430	110	23	0.9545454545454546	+	UUCAGUCCCUCAAGCAAGUUGUCAAGCGGU	43	3	105	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:546898-548916	Cluster_6420	Pocillopora_meandrina_HIv1___Sc0000028	546898	548916	2019	2407	914	0.6730369754881596	.	UGAGGAAUAUGAUCUACACCAUUGCUGC	62	124	1926	38	84	77	158	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:598975-599397	Cluster_6421	Pocillopora_meandrina_HIv1___Sc0000028	598975	599397	423	122	44	0.13114754098360656	-	UAUGAUAUCACUGUGGAGCGAGG	44	17	24	5	3	59	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:795185-795603	Cluster_6422	Pocillopora_meandrina_HIv1___Sc0000028	795185	795603	419	322	218	1.0	+	UUUGCAGAUGUGGAAAAUGACC	7	142	84	33	31	13	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:797935-798365	Cluster_6423	Pocillopora_meandrina_HIv1___Sc0000028	797935	798365	431	335	236	0.9970149253731343	+	AGUGUGCUCUUGACC	10	101	139	27	17	34	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:820275-820700	Cluster_6424	Pocillopora_meandrina_HIv1___Sc0000028	820275	820700	426	176	19	0.0	-	UGGAUUCUUGAAAAAAAAAAAAAAAA	36	6	124	2	7	13	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:866909-867338	Cluster_6425	Pocillopora_meandrina_HIv1___Sc0000028	866909	867338	430	490	120	0.9551020408163265	+	UGUUUAUCUUCUGUAUGAUUUGGCUCGGU	107	7	454	15	4	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:867670-868097	Cluster_6426	Pocillopora_meandrina_HIv1___Sc0000028	867670	868097	428	140	47	0.9357142857142857	+	UGAACGCAGAACAGUAGGCCCGUUGGUGA	23	5	124	1	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:893322-893750	Cluster_6427	Pocillopora_meandrina_HIv1___Sc0000028	893322	893750	429	227	127	0.013215859030837005	-	CAACAAUGGACAUAGAAGAGUACAAUGCAU	16	8	206	3	4	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:925585-926031	Cluster_6428	Pocillopora_meandrina_HIv1___Sc0000028	925585	926031	447	238	92	0.2857142857142857	.	GAAGAGCUGAAAAAACAGAAACAGAAGACA	32	20	212	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:928630-929114	Cluster_6429	Pocillopora_meandrina_HIv1___Sc0000028	928630	929114	485	407	92	0.24324324324324326	.	GCUGAAAACAACAAUGGACAUAGAAGAGC	92	16	358	4	3	3	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:929523-930086	Cluster_6430	Pocillopora_meandrina_HIv1___Sc0000028	929523	930086	564	696	273	0.007183908045977011	-	AACAGUGAAGUGUGAAUCUCUAAUGAUCUU	71	43	570	30	23	12	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:935841-936270	Cluster_6431	Pocillopora_meandrina_HIv1___Sc0000028	935841	936270	430	274	89	0.0036496350364963502	-	UCUCAAAGCCAUAUCUGCUGGUCUUCCAGU	54	14	242	2	7	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:975759-976189	Cluster_6432	Pocillopora_meandrina_HIv1___Sc0000028	975759	976189	431	116	28	0.008620689655172414	-	UGUGACUGAAAAGAUCCUGAAGGAACUGAAC	66	3	107	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:980374-980928	Cluster_6433	Pocillopora_meandrina_HIv1___Sc0000028	980374	980928	555	554	271	0.09927797833935018	-	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	42	9	519	2	9	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:981598-982018	Cluster_6434	Pocillopora_meandrina_HIv1___Sc0000028	981598	982018	421	205	106	0.00975609756097561	-	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	31	2	197	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:982238-982666	Cluster_6435	Pocillopora_meandrina_HIv1___Sc0000028	982238	982666	429	297	111	0.07407407407407407	-	UACGUGUAGAAAGCCUUCUCUGACAUC	25	1	276	2	3	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1030156-1030585	Cluster_6436	Pocillopora_meandrina_HIv1___Sc0000028	1030156	1030585	430	393	123	0.7659033078880407	.	UUUUGUGUUAUCUUGUCUUGGAGA	59	11	250	19	7	38	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1031663-1032256	Cluster_6437	Pocillopora_meandrina_HIv1___Sc0000028	1031663	1032256	594	1764	404	0.93140589569161	+	UAUGAAAGAUCUUGAUGUGGUGCGUCA	149	28	1687	4	10	10	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1032408-1032895	Cluster_6438	Pocillopora_meandrina_HIv1___Sc0000028	1032408	1032895	488	3299	286	0.9615034859048196	+	UAAGAUCUCUUCGGUCAGAUCGUCACGG	1174	21	3251	1	6	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1044986-1045476	Cluster_6439	Pocillopora_meandrina_HIv1___Sc0000028	1044986	1045476	491	1334	351	0.24212893553223389	.	GAAGAGCUGAAAAAAUGGAAACAGAAGAC	90	68	1203	11	16	13	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1045550-1046459	Cluster_6440	Pocillopora_meandrina_HIv1___Sc0000028	1045550	1046459	910	1509	424	0.12392312789927104	-	GCUGAAAACAACGAUGGACACAGAAGAGU	259	47	1344	8	70	12	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1049910-1050670	Cluster_6441	Pocillopora_meandrina_HIv1___Sc0000028	1049910	1050670	761	1912	709	0.01778242677824268	-	CAACUAACCAUCCGUCGAUAUUGCAGUGA	79	108	1590	21	25	40	128	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1083748-1084176	Cluster_6442	Pocillopora_meandrina_HIv1___Sc0000028	1083748	1084176	429	155	25	0.03870967741935484	-	UUGACUGACAGAAGAUCUGGAAACUGA	42	7	142	2	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1084464-1084890	Cluster_6443	Pocillopora_meandrina_HIv1___Sc0000028	1084464	1084890	427	250	110	0.232	.	ACAAAUCCCAAAAGACUGAGCCCUCAACUC	41	7	220	5	3	7	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1085052-1085838	Cluster_6444	Pocillopora_meandrina_HIv1___Sc0000028	1085052	1085838	787	620	293	0.21129032258064517	.	UGCAUCUUUCUUUGUCGGACUCCACAGUU	35	7	531	2	4	9	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1092280-1093012	Cluster_6445	Pocillopora_meandrina_HIv1___Sc0000028	1092280	1093012	733	510	250	0.01764705882352941	-	UUUCCCUGAAAGGCUAUGAUGUAGUUGCA	34	13	443	1	5	29	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1114711-1115140	Cluster_6446	Pocillopora_meandrina_HIv1___Sc0000028	1114711	1115140	430	427	111	0.5011709601873536	.	UCUGUCUCAACAAUCUUUGUCUUCUGUU	50	1	414	3	4	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1115370-1115798	Cluster_6447	Pocillopora_meandrina_HIv1___Sc0000028	1115370	1115798	429	235	118	0.0851063829787234	-	GAAAAGAUCUUGAAGGAACUGAACCUGGCA	16	7	216	1	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1116461-1117551	Cluster_6448	Pocillopora_meandrina_HIv1___Sc0000028	1116461	1117551	1091	2783	898	0.08731584620912684	-	AUGGAUCCAAUUUGUUCACGUCUACUGCG	95	79	2394	51	50	54	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1141498-1141925	Cluster_6449	Pocillopora_meandrina_HIv1___Sc0000028	1141498	1141925	428	1331	81	0.9962434259954921	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	669	1	1324	3	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1151158-1151877	Cluster_6450	Pocillopora_meandrina_HIv1___Sc0000028	1151158	1151877	720	2517	575	0.17123559793404847	-	UUAAACCGACUCACAGUCCGAUUCGAAU	260	59	2113	8	31	206	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1158472-1158900	Cluster_6451	Pocillopora_meandrina_HIv1___Sc0000028	1158472	1158900	429	340	107	0.0	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	70	3	333	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1165516-1165927	Cluster_6452	Pocillopora_meandrina_HIv1___Sc0000028	1165516	1165927	412	104	55	0.5480769230769231	.	AUGUCGGCCAUCUUUGUUAA	13	60	14	21	4	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1204201-1204631	Cluster_6453	Pocillopora_meandrina_HIv1___Sc0000028	1204201	1204631	431	113	33	0.017699115044247787	-	UGGAUUAUCGACGUUUAACAGAGAACUUGCC	48	5	102	3	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1221414-1222060	Cluster_6454	Pocillopora_meandrina_HIv1___Sc0000028	1221414	1222060	647	399	192	0.005012531328320802	-	AAUGAAUCAAAGUUGGCUGUAGACAGAUC	17	4	352	1	0	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1261645-1262093	Cluster_6455	Pocillopora_meandrina_HIv1___Sc0000028	1261645	1262093	449	617	170	0.14100486223662884	-	GAAGAGCUGAAAAAAUGGAAACAGAAGACA	86	3	605	0	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1264644-1265502	Cluster_6456	Pocillopora_meandrina_HIv1___Sc0000028	1264644	1265502	859	1624	436	0.02647783251231527	-	GCUGAAAACAACAAUGGACAUAGAAGAGU	80	44	1453	6	62	27	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1269510-1270947	Cluster_6457	Pocillopora_meandrina_HIv1___Sc0000028	1269510	1270947	1438	10731	2188	0.10371819960861056	-	AUCAGUCAGAUUUGGUUGCUCUGCCAUCCC	680	378	9734	67	96	179	277	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1373147-1373575	Cluster_6458	Pocillopora_meandrina_HIv1___Sc0000028	1373147	1373575	429	105	39	1.0	+	UCUCAAAGCCAUAUCUGCUGGUCUUCCAGU	23	4	100	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1395524-1396507	Cluster_6459	Pocillopora_meandrina_HIv1___Sc0000028	1395524	1396507	984	1303	467	0.9416730621642364	+	AUGGAUCCAAUUUGUACACGUCUACUGUG	82	47	1187	11	14	23	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1397764-1398188	Cluster_6460	Pocillopora_meandrina_HIv1___Sc0000028	1397764	1398188	425	170	82	1.0	+	GCUGAAAACAACAAUGGAUGAGGGAGAGU	14	7	151	2	0	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1558478-1558895	Cluster_6461	Pocillopora_meandrina_HIv1___Sc0000028	1558478	1558895	418	949	28	0.9778714436248683	+	GAAGUUCUGGUUUAAAAA	692	937	5	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1830461-1830875	Cluster_6462	Pocillopora_meandrina_HIv1___Sc0000028	1830461	1830875	415	379	44	0.8733509234828496	+	UGGCCUGAAAAAAAA	262	344	27	4	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1838433-1838839	Cluster_6463	Pocillopora_meandrina_HIv1___Sc0000028	1838433	1838839	407	158	106	0.0	-	AAGUUGGCAGAGAAUU	5	71	51	8	11	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1844679-1845079	Cluster_6464	Pocillopora_meandrina_HIv1___Sc0000028	1844679	1845079	401	222	167	0.0045045045045045045	-	UUUGACAGCAAGAAAUGGGU	4	105	55	19	18	7	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:1959386-1959901	Cluster_6465	Pocillopora_meandrina_HIv1___Sc0000028	1959386	1959901	516	416	164	0.8605769230769231	+	UGAGAUUGUGUAGGUAUGUCUUUUGGACAGG	28	5	358	0	1	44	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2035084-2035513	Cluster_6466	Pocillopora_meandrina_HIv1___Sc0000028	2035084	2035513	430	863	61	1.0	+	CUUGCAAGGAUCAACCGAUGGAAAUUAUGU	371	3	846	2	7	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2235435-2235851	Cluster_6467	Pocillopora_meandrina_HIv1___Sc0000028	2235435	2235851	417	944	50	0.001059322033898305	-	CUCGUUGUGUGUGUGU	406	944	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2254255-2254724	Cluster_6468	Pocillopora_meandrina_HIv1___Sc0000028	2254255	2254724	470	535	201	0.018691588785046728	-	GCUGAAAACAACAAUAGACGUAGAAGAGU	66	23	484	3	0	13	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2269759-2270188	Cluster_6469	Pocillopora_meandrina_HIv1___Sc0000028	2269759	2270188	430	296	47	0.9797297297297297	+	UGAUCAAGUUUCCUAUCGCCUGUAAACA	90	1	294	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2272485-2273583	Cluster_6470	Pocillopora_meandrina_HIv1___Sc0000028	2272485	2273583	1099	1190	449	0.2218487394957983	.	UCCGUGACACAACGACUUUGCCUUGCUU	111	22	1032	12	3	24	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2273753-2274200	Cluster_6471	Pocillopora_meandrina_HIv1___Sc0000028	2273753	2274200	448	497	201	0.18309859154929578	-	UAUGACGUUCCAGAAUCUUUGACAAAA	47	2	467	5	8	4	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2274766-2275194	Cluster_6472	Pocillopora_meandrina_HIv1___Sc0000028	2274766	2275194	429	126	42	0.0	-	AAACGAUUGAAUAGCAUAACUGAUGAACU	25	0	123	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2281627-2282045	Cluster_6473	Pocillopora_meandrina_HIv1___Sc0000028	2281627	2282045	419	153	71	0.026143790849673203	-	UGAAGAUCUGAACGUCUUGGCAUUGUC	30	4	146	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2285050-2285476	Cluster_6474	Pocillopora_meandrina_HIv1___Sc0000028	2285050	2285476	427	95	15	0.9789473684210527	+	AACUACUGCUCGUGCUCUAGAUAUGACA	53	0	93	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2318943-2319363	Cluster_6475	Pocillopora_meandrina_HIv1___Sc0000028	2318943	2319363	421	492	30	0.0	-	UGGCAUGAAAAAAAA	158	396	0	57	39	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2340694-2341108	Cluster_6476	Pocillopora_meandrina_HIv1___Sc0000028	2340694	2341108	415	79	7	0.02531645569620253	-	AUAGGUAGCUGGAUCA	46	77	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2502458-2502858	Cluster_6477	Pocillopora_meandrina_HIv1___Sc0000028	2502458	2502858	401	355	229	0.8450704225352113	+	UCCGAUUUUCUCAACCGCCUCUUGUCC	12	10	293	3	7	19	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2503021-2503697	Cluster_6478	Pocillopora_meandrina_HIv1___Sc0000028	2503021	2503697	677	8121	561	0.9950744982145056	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2210	13	7975	0	55	43	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2506422-2506837	Cluster_6479	Pocillopora_meandrina_HIv1___Sc0000028	2506422	2506837	416	129	52	0.5891472868217055	.	UAGUCCUAAUCAGUCAUUAAAUUUGGUC	22	7	114	3	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2516269-2516951	Cluster_6480	Pocillopora_meandrina_HIv1___Sc0000028	2516269	2516951	683	1483	328	0.7498314227916386	.	UGAAAACUUUGAACAGACUUUACCUGAAAA	136	13	1429	14	8	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:2655966-2656393	Cluster_6481	Pocillopora_meandrina_HIv1___Sc0000028	2655966	2656393	428	255	53	0.011764705882352941	-	UGUUGUGUUGUUUGAUCGUGGGUAUCCA	104	0	247	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3016606-3017082	Cluster_6482	Pocillopora_meandrina_HIv1___Sc0000028	3016606	3017082	477	3461251	1655	1.7334772889917547e-06	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	1109389	6205	3450389	130	348	347	3832	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3652276-3652691	Cluster_6483	Pocillopora_meandrina_HIv1___Sc0000028	3652276	3652691	416	436	28	1.0	+	GAGUGUGCUCUUAAU	217	436	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3737511-3738213	Cluster_6484	Pocillopora_meandrina_HIv1___Sc0000028	3737511	3738213	703	2045	504	0.3926650366748166	.	ACACAGUGCAACUCUCGAAUCUUAAAAAU	184	19	1861	15	14	56	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3889829-3890245	Cluster_6485	Pocillopora_meandrina_HIv1___Sc0000028	3889829	3890245	417	166	3	0.0	-	GAUGGAUGGAGACUGCC	162	166	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:3991237-3991652	Cluster_6486	Pocillopora_meandrina_HIv1___Sc0000028	3991237	3991652	416	153	15	0.0196078431372549	-	GUUGGAUCCGGCCCAA	58	153	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4089363-4089779	Cluster_6487	Pocillopora_meandrina_HIv1___Sc0000028	4089363	4089779	417	949	19	0.002107481559536354	-	GAGUGUGCUCUUAACCA	768	947	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4165139-4165567	Cluster_6488	Pocillopora_meandrina_HIv1___Sc0000028	4165139	4165567	429	177	56	0.022598870056497175	-	UAACGAACAGCUCGAACACUCGAUACCAGC	30	2	171	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4188650-4189071	Cluster_6489	Pocillopora_meandrina_HIv1___Sc0000028	4188650	4189071	422	133	78	0.7593984962406015	.	UAACACUAUAAACAUUCUGAGGGCGAUU	10	0	115	2	4	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4189085-4189513	Cluster_6490	Pocillopora_meandrina_HIv1___Sc0000028	4189085	4189513	429	189	91	0.8994708994708994	+	UAAUGAACGUAUAGCCAUCCAGUUGAACU	16	3	182	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4264041-4264455	Cluster_6491	Pocillopora_meandrina_HIv1___Sc0000028	4264041	4264455	415	96	11	0.9583333333333334	+	UCCGGCCCGGACCUC	80	96	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4337321-4337736	Cluster_6492	Pocillopora_meandrina_HIv1___Sc0000028	4337321	4337736	416	230	69	0.9695652173913043	+	UGUAUCCCAACCAAGU	138	144	77	1	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4395480-4395908	Cluster_6493	Pocillopora_meandrina_HIv1___Sc0000028	4395480	4395908	429	304	78	0.1611842105263158	-	AUUGAUUCUAUUUUGUACGGCCUAGU	104	9	279	4	4	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4630292-4630706	Cluster_6494	Pocillopora_meandrina_HIv1___Sc0000028	4630292	4630706	415	109	18	1.0	+	GAAUCGGCUGUGGAUU	32	109	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000028:4997301-4997774	Cluster_6495	Pocillopora_meandrina_HIv1___Sc0000028	4997301	4997774	474	1296	200	1.0	+	GCAGCUGAUGAAUUAAAAUU	148	898	97	167	82	31	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:241050-241477	Cluster_6496	Pocillopora_meandrina_HIv1___Sc0000029	241050	241477	428	337	130	0.9436201780415431	+	UCUGUCUCCUCUGUAAUAAUGACACUGA	73	4	318	2	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:269350-269760	Cluster_6497	Pocillopora_meandrina_HIv1___Sc0000029	269350	269760	411	181	107	0.06077348066298342	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	39	4	169	1	2	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:271605-272654	Cluster_6498	Pocillopora_meandrina_HIv1___Sc0000029	271605	272654	1050	710	336	0.7887323943661971	.	UGAUCAUAUAUUAUUCUAUCUGGAGA	26	7	665	7	2	14	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:272914-273344	Cluster_6499	Pocillopora_meandrina_HIv1___Sc0000029	272914	273344	431	628	219	0.8869426751592356	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	88	7	539	3	2	12	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:354102-354884	Cluster_6500	Pocillopora_meandrina_HIv1___Sc0000029	354102	354884	783	1887	353	0.8547959724430313	+	UUCAUGCUCUCGUUGUUCAACUGAACGAAG	288	268	1530	7	3	59	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:478823-479302	Cluster_6501	Pocillopora_meandrina_HIv1___Sc0000029	478823	479302	480	1697	225	0.9988214496169712	+	UGGACAAAUUCAUAGGUCUGAUGCAAAC	272	48	1620	3	9	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:480405-480833	Cluster_6502	Pocillopora_meandrina_HIv1___Sc0000029	480405	480833	429	190	35	0.9736842105263158	+	UCUUCAUCAUCUGGUUCACUGGCUGUAAA	89	1	189	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:486033-486480	Cluster_6503	Pocillopora_meandrina_HIv1___Sc0000029	486033	486480	448	756	125	0.7605820105820106	.	UCUUUCCAUUUACAGACUCAAGUGGCUGU	142	3	742	2	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:488897-489351	Cluster_6504	Pocillopora_meandrina_HIv1___Sc0000029	488897	489351	455	1460	267	0.834931506849315	+	UUUCCAACGUAUCGAAGAAAAUUUCACUGA	168	13	1375	1	10	26	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:958370-958779	Cluster_6505	Pocillopora_meandrina_HIv1___Sc0000029	958370	958779	410	86	27	0.023255813953488372	-	UGAAAAACUGUGACCGAGGC	26	58	3	21	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1029893-1030594	Cluster_6506	Pocillopora_meandrina_HIv1___Sc0000029	1029893	1030594	702	276	141	0.9130434782608695	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	24	4	263	0	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1031824-1032253	Cluster_6507	Pocillopora_meandrina_HIv1___Sc0000029	1031824	1032253	430	335	193	0.7880597014925373	.	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	26	6	301	3	1	6	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1036434-1036847	Cluster_6508	Pocillopora_meandrina_HIv1___Sc0000029	1036434	1036847	414	137	84	0.9197080291970803	+	UUUGAUCGGUUUUGGCGUGU	16	81	1	43	10	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1128233-1128662	Cluster_6509	Pocillopora_meandrina_HIv1___Sc0000029	1128233	1128662	430	141	66	0.9574468085106383	+	UGUUUACUUUCUUUACAACUUCGGAUACGGG	28	0	135	1	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1356522-1356951	Cluster_6510	Pocillopora_meandrina_HIv1___Sc0000029	1356522	1356951	430	5917	25	0.0011830319418624302	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAA	2896	136	5743	8	11	7	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1493958-1494373	Cluster_6511	Pocillopora_meandrina_HIv1___Sc0000029	1493958	1494373	416	1080	8	0.002777777777777778	-	CGUGGAAGGUAGGUCC	936	1080	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1617394-1617993	Cluster_6512	Pocillopora_meandrina_HIv1___Sc0000029	1617394	1617993	600	1521	272	0.20512820512820512	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	503	12	1441	6	7	14	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1618346-1618896	Cluster_6513	Pocillopora_meandrina_HIv1___Sc0000029	1618346	1618896	551	227	79	0.08370044052863436	-	UAUACUCCAAAGGUUCUGAAAACGAAUG	31	3	191	2	2	22	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1638242-1638651	Cluster_6514	Pocillopora_meandrina_HIv1___Sc0000029	1638242	1638651	410	168	68	0.7678571428571429	.	UUGUUAACUUUGUCUACA	22	54	84	2	0	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1726811-1727238	Cluster_6515	Pocillopora_meandrina_HIv1___Sc0000029	1726811	1727238	428	214	89	0.9158878504672897	+	UUAAAUGGCUUGUAAUGACUAAUAAACA	41	0	214	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1727380-1728146	Cluster_6516	Pocillopora_meandrina_HIv1___Sc0000029	1727380	1728146	767	1814	527	0.8792723263506064	+	UGGAUCAAUCUGUUUUUUAUGACAAUA	105	9	1704	2	26	32	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1729528-1730826	Cluster_6517	Pocillopora_meandrina_HIv1___Sc0000029	1729528	1730826	1299	9738	1879	0.5736290819470117	.	ACAUGACAAAACUACGAGCUUAGAAGA	729	76	7895	64	736	318	649	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1983857-1984287	Cluster_6518	Pocillopora_meandrina_HIv1___Sc0000029	1983857	1984287	431	118	26	0.06779661016949153	-	UAAUUCAAACUAUUUGGACACUGGCUUCAAU	66	3	109	1	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:1991849-1992264	Cluster_6519	Pocillopora_meandrina_HIv1___Sc0000029	1991849	1992264	416	274	9	0.01824817518248175	-	GCUGGAUGAUGAGACA	259	270	0	0	0	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2110212-2110620	Cluster_6520	Pocillopora_meandrina_HIv1___Sc0000029	2110212	2110620	409	150	87	0.006666666666666667	-	UCCCACAUGGUCUAGCGGUUAGGAUUCCU	15	42	76	15	4	8	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2127060-2127473	Cluster_6521	Pocillopora_meandrina_HIv1___Sc0000029	2127060	2127473	414	188	138	0.0	-	UAAAUGUACUGUGGGUUGAUACACUUGCCGC	5	44	100	17	6	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2144180-2144602	Cluster_6522	Pocillopora_meandrina_HIv1___Sc0000029	2144180	2144602	423	2283	42	0.9995619798510732	+	CGGCCUGAAGAAAAAAAA	345	1457	1	311	284	227	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2159103-2159904	Cluster_6523	Pocillopora_meandrina_HIv1___Sc0000029	2159103	2159904	802	383	136	0.33159268929503916	.	UUCGCGUCUGAAGCUGUUAGAGU	100	64	19	30	29	214	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2406015-2406432	Cluster_6524	Pocillopora_meandrina_HIv1___Sc0000029	2406015	2406432	418	107	48	0.04672897196261682	-	UAUUGCUGAACAGACGCACA	33	90	3	6	6	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2576425-2576847	Cluster_6525	Pocillopora_meandrina_HIv1___Sc0000029	2576425	2576847	423	246	53	0.032520325203252036	-	UGGUUUUGUUAGACGAAUGAUG	46	36	2	10	125	68	5	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2755286-2755714	Cluster_6526	Pocillopora_meandrina_HIv1___Sc0000029	2755286	2755714	429	1001	99	0.999000999000999	+	AAGUUGAACAGUACAUACUUGGAGGGCA	326	8	944	1	24	7	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2828034-2828449	Cluster_6527	Pocillopora_meandrina_HIv1___Sc0000029	2828034	2828449	416	993	14	1.0	+	ACGGAGAACUCUUUU	762	990	1	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2865054-2865470	Cluster_6528	Pocillopora_meandrina_HIv1___Sc0000029	2865054	2865470	417	1109	34	0.004508566275924256	-	AAGUGUGCUCUUAACGG	592	1098	6	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:2960057-2960471	Cluster_6529	Pocillopora_meandrina_HIv1___Sc0000029	2960057	2960471	415	164	19	0.9329268292682927	+	ACAACUUUUGACGGA	144	157	3	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3026372-3026789	Cluster_6530	Pocillopora_meandrina_HIv1___Sc0000029	3026372	3026789	418	2166	16	0.9986149584487535	+	CUUUCCGAGGUCGCA	1999	2163	1	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3051144-3051553	Cluster_6531	Pocillopora_meandrina_HIv1___Sc0000029	3051144	3051553	410	167	73	0.6107784431137725	.	UCGGUUAUAAGACGCACCCUGAAUUUUU	40	2	146	1	3	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3159055-3159478	Cluster_6532	Pocillopora_meandrina_HIv1___Sc0000029	3159055	3159478	424	161	45	0.031055900621118012	-	UUAACUGGUAGUCAUGACGUCUCC	52	6	100	0	0	2	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3218961-3219391	Cluster_6533	Pocillopora_meandrina_HIv1___Sc0000029	3218961	3219391	431	4655	148	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUC	1474	7	4646	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3310559-3310967	Cluster_6534	Pocillopora_meandrina_HIv1___Sc0000029	3310559	3310967	409	170	142	0.9882352941176471	+	AUAAAGGAUCACGAGAUAGAGAGCU	4	50	66	15	13	13	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3399940-3400368	Cluster_6535	Pocillopora_meandrina_HIv1___Sc0000029	3399940	3400368	429	446	20	0.002242152466367713	-	ACAUUACCGAAUGACUGUUCUAAAGAAUU	306	3	434	1	2	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3440457-3440885	Cluster_6536	Pocillopora_meandrina_HIv1___Sc0000029	3440457	3440885	429	132	38	0.9924242424242424	+	AAACGAUUGAAUAGCAUAACUGAUGAACU	25	1	131	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3518051-3518964	Cluster_6537	Pocillopora_meandrina_HIv1___Sc0000029	3518051	3518964	914	2150	603	0.2372093023255814	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	148	22	1795	11	21	192	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:3632843-3633257	Cluster_6538	Pocillopora_meandrina_HIv1___Sc0000029	3632843	3633257	415	761	19	0.00788436268068331	-	CCUUCCGAGGUCGCG	484	761	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4083264-4083680	Cluster_6539	Pocillopora_meandrina_HIv1___Sc0000029	4083264	4083680	417	172	120	0.005813953488372093	-	CAAAGAUUGGUGUGUA	8	68	68	9	9	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4149965-4150380	Cluster_6540	Pocillopora_meandrina_HIv1___Sc0000029	4149965	4150380	416	152	22	0.006578947368421052	-	GACACUCUGUCUCGUA	41	152	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4301144-4301558	Cluster_6541	Pocillopora_meandrina_HIv1___Sc0000029	4301144	4301558	415	130	5	0.0	-	UUGUUUAUGCCGUGA	108	130	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4531906-4532322	Cluster_6542	Pocillopora_meandrina_HIv1___Sc0000029	4531906	4532322	417	988	28	0.0010121457489878543	-	UGAAAAUCUUUGCUCGG	809	987	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4582445-4583042	Cluster_6543	Pocillopora_meandrina_HIv1___Sc0000029	4582445	4583042	598	638	397	0.0	-	GAGAGAGGACGAAUUGCU	15	296	170	55	51	31	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000029:4784120-4784526	Cluster_6544	Pocillopora_meandrina_HIv1___Sc0000029	4784120	4784526	407	131	71	0.9694656488549618	+	GCUUCUAUUACCGUCAGAUCUUUGAAGAGU	33	27	89	3	8	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:81358-81775	Cluster_6545	Pocillopora_meandrina_HIv1___Sc0000030	81358	81775	418	104	7	0.9711538461538461	+	CUUCCAAGACUCCAGACA	80	104	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:124286-124707	Cluster_6546	Pocillopora_meandrina_HIv1___Sc0000030	124286	124707	422	232	93	0.5	.	AACGUGUCGAUUGUGAGUUUUCAC	20	10	149	1	11	20	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:125789-126216	Cluster_6547	Pocillopora_meandrina_HIv1___Sc0000030	125789	126216	428	99	28	0.0	-	UUAAAUGAGCUUUCGCGAUAACAUGAGGA	43	0	98	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:126305-126731	Cluster_6548	Pocillopora_meandrina_HIv1___Sc0000030	126305	126731	427	230	73	0.0	-	UCUUUCUGGAUACGGCAGCUUCUUGAA	71	15	210	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:128747-129161	Cluster_6549	Pocillopora_meandrina_HIv1___Sc0000030	128747	129161	415	346	28	0.9335260115606936	+	GCCCGGCUAGCUCCG	179	324	20	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:130028-130451	Cluster_6550	Pocillopora_meandrina_HIv1___Sc0000030	130028	130451	424	122	52	0.01639344262295082	-	UCCGUUGUCACUUCGAAUCUCCUUGGGGC	25	1	117	1	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:161973-162400	Cluster_6551	Pocillopora_meandrina_HIv1___Sc0000030	161973	162400	428	100	31	0.96	+	UAUUUGCACUAUUGUGGAAAAUUCCUGGC	14	2	98	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:334192-334597	Cluster_6552	Pocillopora_meandrina_HIv1___Sc0000030	334192	334597	406	302	231	0.9933774834437086	+	CCAUUUGUGGAACGUCUGCUCAAGAAGGGU	5	118	100	19	26	13	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:334765-335299	Cluster_6553	Pocillopora_meandrina_HIv1___Sc0000030	334765	335299	535	902	328	0.9922394678492239	+	GAAGACCAACUGUUAUGUUAAUGAAGC	50	185	495	27	44	56	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:369631-370103	Cluster_6554	Pocillopora_meandrina_HIv1___Sc0000030	369631	370103	473	429	119	0.5407925407925408	.	CAAGAACUCAGCUACCCUCGAUAUUUCCUU	56	8	393	3	16	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:430966-431890	Cluster_6555	Pocillopora_meandrina_HIv1___Sc0000030	430966	431890	925	1274	275	0.5070643642072213	.	UCUUCCUUUUAUCUCCUGUCCUUUUUAGA	195	26	1148	7	11	26	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:487052-487460	Cluster_6556	Pocillopora_meandrina_HIv1___Sc0000030	487052	487460	409	135	73	0.14814814814814814	-	UGUAGACGUUUGAUCAGUAUAUCAUGAUU	12	3	122	0	0	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:512019-512447	Cluster_6557	Pocillopora_meandrina_HIv1___Sc0000030	512019	512447	429	314	88	0.1624203821656051	-	AUUGAUUCUAUUUUGUACGGCCUAGU	94	9	284	3	10	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:528530-529053	Cluster_6558	Pocillopora_meandrina_HIv1___Sc0000030	528530	529053	524	1040	171	0.9903846153846154	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	351	34	911	10	2	13	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:634495-634911	Cluster_6559	Pocillopora_meandrina_HIv1___Sc0000030	634495	634911	417	130	12	0.0	-	UAAAAUUCUGAGCAGGA	83	130	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:794156-794584	Cluster_6560	Pocillopora_meandrina_HIv1___Sc0000030	794156	794584	429	194	101	0.9948453608247423	+	UGGCAAGACAGUAGAGUUAGCAUUAUGGGA	30	44	117	12	13	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:802573-802987	Cluster_6561	Pocillopora_meandrina_HIv1___Sc0000030	802573	802987	415	155	101	0.9935483870967742	+	CGGCAAGACAGUAGAGUUAGCAUUAUGGG	16	27	89	14	8	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:976254-976669	Cluster_6562	Pocillopora_meandrina_HIv1___Sc0000030	976254	976669	416	1110	45	0.9990990990990991	+	AAUGUGCUCUUAACUG	363	1109	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1038302-1038717	Cluster_6563	Pocillopora_meandrina_HIv1___Sc0000030	1038302	1038717	416	161	121	0.006211180124223602	-	UACUGGCUGAGUUACGACUGUGAAA	4	60	62	12	13	11	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1096429-1096854	Cluster_6564	Pocillopora_meandrina_HIv1___Sc0000030	1096429	1096854	426	227	159	0.0	-	UCUGAGGAUCAAGAAUUUUGGUGUUU	8	75	92	14	18	17	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1302849-1303275	Cluster_6565	Pocillopora_meandrina_HIv1___Sc0000030	1302849	1303275	427	218	45	0.09174311926605505	-	UGAAACUCUGAUCUGAAAACAUUUGUC	70	27	182	6	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1409546-1410032	Cluster_6566	Pocillopora_meandrina_HIv1___Sc0000030	1409546	1410032	487	1518	350	0.9993412384716732	+	ACACUCAUUGCUGUGUUUAUUCUUGACAUG	177	116	1259	20	24	34	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1504933-1505351	Cluster_6567	Pocillopora_meandrina_HIv1___Sc0000030	1504933	1505351	419	149	55	0.0	-	UUAGUUGUUAAAACGGCUGCUCU	17	21	15	14	43	44	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1620502-1621065	Cluster_6568	Pocillopora_meandrina_HIv1___Sc0000030	1620502	1621065	564	763	251	0.035386631716906945	-	UGACUCGUGUUAGUGCUCGGUGCUUCG	104	13	718	5	7	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1621328-1621755	Cluster_6569	Pocillopora_meandrina_HIv1___Sc0000030	1621328	1621755	428	144	65	0.020833333333333332	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	28	0	139	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1623898-1624427	Cluster_6570	Pocillopora_meandrina_HIv1___Sc0000030	1623898	1624427	530	599	230	0.01001669449081803	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	24	3	584	1	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:1624548-1624977	Cluster_6571	Pocillopora_meandrina_HIv1___Sc0000030	1624548	1624977	430	658	146	0.022796352583586626	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	140	1	642	6	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2184565-2184991	Cluster_6572	Pocillopora_meandrina_HIv1___Sc0000030	2184565	2184991	427	214	47	0.9906542056074766	+	UAAUCGUUGGCUUUUUCUCGAGACGGG	44	4	204	1	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2250966-2251677	Cluster_6573	Pocillopora_meandrina_HIv1___Sc0000030	2250966	2251677	712	366	139	0.7158469945355191	.	UUUUGCAGUUGAACUUAAGGAACAUAGC	45	8	318	13	3	3	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2351815-2352244	Cluster_6574	Pocillopora_meandrina_HIv1___Sc0000030	2351815	2352244	430	2015	192	0.0004962779156327543	-	UUGGAACGUGUUGCUGAACGCUUGUUGU	766	9	1999	0	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2352347-2352778	Cluster_6575	Pocillopora_meandrina_HIv1___Sc0000030	2352347	2352778	432	2704	159	0.0033284023668639054	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	1005	1	2700	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2441886-2442310	Cluster_6576	Pocillopora_meandrina_HIv1___Sc0000030	2441886	2442310	425	86	35	0.9883720930232558	+	UGUGUAGAUAUGUCUUUUGGACAGGA	24	0	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2443376-2443803	Cluster_6577	Pocillopora_meandrina_HIv1___Sc0000030	2443376	2443803	428	201	101	0.9104477611940298	+	UGUUCUCGGUUAUCAGCUCAGAAAUGCG	17	1	184	1	2	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2455657-2457394	Cluster_6578	Pocillopora_meandrina_HIv1___Sc0000030	2455657	2457394	1738	2730	1096	0.958974358974359	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	85	24	2585	14	25	43	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2530379-2530788	Cluster_6579	Pocillopora_meandrina_HIv1___Sc0000030	2530379	2530788	410	117	48	0.5213675213675214	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	21	4	107	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2535115-2535893	Cluster_6580	Pocillopora_meandrina_HIv1___Sc0000030	2535115	2535893	779	2207	546	0.2342546443135478	.	UUUUCCAUUUCGUCUUUCAGAAAGCUGAU	171	59	2008	5	14	43	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2541437-2541859	Cluster_6581	Pocillopora_meandrina_HIv1___Sc0000030	2541437	2541859	423	514	67	0.9766536964980544	+	UUCGCGUCUGAAGCUGUUAGAGU	225	60	11	8	93	332	10	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2552047-2553299	Cluster_6582	Pocillopora_meandrina_HIv1___Sc0000030	2552047	2553299	1253	13655	1113	0.02980593189307946	-	UUUGUAGGCUCUAACAGUACAUUGUU	4354	182	13207	24	43	44	155	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2561843-2563369	Cluster_6583	Pocillopora_meandrina_HIv1___Sc0000030	2561843	2563369	1527	18238	1869	0.04715429323390723	-	UUUGUAGGCUCUAACAGUACAUUGUU	4410	370	17271	43	48	106	400	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2574974-2575596	Cluster_6584	Pocillopora_meandrina_HIv1___Sc0000030	2574974	2575596	623	587	218	0.9948892674616695	+	UGUAUUGUAGCCGUAAGAUUCCUUUUGGAUC	115	5	565	2	2	0	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2575919-2576424	Cluster_6585	Pocillopora_meandrina_HIv1___Sc0000030	2575919	2576424	506	1686	212	0.998220640569395	+	UGAAACUCUUUGUAUAAUGUACGUAUCCGG	710	8	1669	1	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2583026-2583561	Cluster_6586	Pocillopora_meandrina_HIv1___Sc0000030	2583026	2583561	536	286	138	0.23076923076923078	.	UACCAGAUCUAGCAAUUAUAGAAGUAUGCC	21	9	247	1	1	8	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2588002-2588429	Cluster_6587	Pocillopora_meandrina_HIv1___Sc0000030	2588002	2588429	428	143	45	0.986013986013986	+	AUGUUUACCAGAGUCGAAAUGAAUCGCC	20	2	136	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2592360-2592789	Cluster_6588	Pocillopora_meandrina_HIv1___Sc0000030	2592360	2592789	430	388	145	0.9278350515463918	+	UGAUGAUAUUUCAGUGAUCACUUUUCUGUU	134	3	369	1	1	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2599239-2599668	Cluster_6589	Pocillopora_meandrina_HIv1___Sc0000030	2599239	2599668	430	114	34	0.9736842105263158	+	AACCACUGCAGAGCCAUAGAAACUUUUUGU	55	6	107	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2616697-2617207	Cluster_6590	Pocillopora_meandrina_HIv1___Sc0000030	2616697	2617207	511	476	127	0.9432773109243697	+	UGUAUCCCAACCAAGU	227	233	223	1	2	3	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2627661-2628089	Cluster_6591	Pocillopora_meandrina_HIv1___Sc0000030	2627661	2628089	429	228	41	0.11403508771929824	-	UAAUCGACGAAUACAAUCCAGGUAUAACC	84	6	194	1	0	19	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2666798-2667351	Cluster_6592	Pocillopora_meandrina_HIv1___Sc0000030	2666798	2667351	554	322	191	0.9813664596273292	+	CCUUAUGCCAAGACUGUGUUAAAACA	33	65	215	13	9	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2738659-2739073	Cluster_6593	Pocillopora_meandrina_HIv1___Sc0000030	2738659	2739073	415	105	10	0.9809523809523809	+	UCCGGCCCGGACCUC	75	104	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:2997180-2997594	Cluster_6594	Pocillopora_meandrina_HIv1___Sc0000030	2997180	2997594	415	373	4	1.0	+	CCGCGACUGCUGCCA	367	373	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3024772-3025323	Cluster_6595	Pocillopora_meandrina_HIv1___Sc0000030	3024772	3025323	552	204	69	0.9313725490196079	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	37	4	183	0	2	12	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3025677-3026276	Cluster_6596	Pocillopora_meandrina_HIv1___Sc0000030	3025677	3026276	600	1422	297	0.8094233473980309	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	474	8	1349	4	6	16	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3073309-3073870	Cluster_6597	Pocillopora_meandrina_HIv1___Sc0000030	3073309	3073870	562	899	340	0.0	-	AGGGAUGGUGAAAUUCAUAGUUCUGAGGCA	179	162	611	28	32	36	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3271465-3271884	Cluster_6598	Pocillopora_meandrina_HIv1___Sc0000030	3271465	3271884	420	239	9	0.008368200836820083	-	GAAGUUCUGGUUUUAAAAAA	84	237	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3297483-3297913	Cluster_6599	Pocillopora_meandrina_HIv1___Sc0000030	3297483	3297913	431	197	80	0.8071065989847716	+	UCGAUUCAAAUUUGACAGUGGCGUGGUUCUU	23	18	156	8	5	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3306546-3306971	Cluster_6600	Pocillopora_meandrina_HIv1___Sc0000030	3306546	3306971	426	130	59	0.11538461538461539	-	UCUUCUUUAUCGUAUUGCUGGUCGUCUCGUC	9	0	117	0	1	1	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3427575-3427996	Cluster_6601	Pocillopora_meandrina_HIv1___Sc0000030	3427575	3427996	422	217	38	0.009216589861751152	-	UCGAAUCCCACUCCUGACACCA	74	115	0	21	74	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3477521-3477947	Cluster_6602	Pocillopora_meandrina_HIv1___Sc0000030	3477521	3477947	427	236	49	0.01694915254237288	-	UGGUAAAAUUCUGUUCAAAGUAGGUGU	57	2	222	6	1	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3555015-3555433	Cluster_6603	Pocillopora_meandrina_HIv1___Sc0000030	3555015	3555433	419	909	76	0.10121012101210121	-	CAACUUUUGACGGUG	265	909	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3568440-3569612	Cluster_6604	Pocillopora_meandrina_HIv1___Sc0000030	3568440	3569612	1173	3003	659	0.374958374958375	.	UGAUUCUGCAGACACUAAAAUAACUCCAUU	284	74	2683	17	19	86	124	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3772717-3773145	Cluster_6605	Pocillopora_meandrina_HIv1___Sc0000030	3772717	3773145	429	172	39	0.9883720930232558	+	UCUUGCUGAGUGACUAAUGUUAGUUCGUA	82	4	157	10	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:3906159-3906573	Cluster_6606	Pocillopora_meandrina_HIv1___Sc0000030	3906159	3906573	415	398	27	0.002512562814070352	-	CUUUCCGAGGUCGAG	295	383	12	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4034894-4035309	Cluster_6607	Pocillopora_meandrina_HIv1___Sc0000030	4034894	4035309	416	104	30	0.038461538461538464	-	GUAGUCGUGGCCGAGUAA	23	91	7	1	2	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4047045-4047691	Cluster_6608	Pocillopora_meandrina_HIv1___Sc0000030	4047045	4047691	647	2462	382	0.0966693744922827	-	UACACUGUGCCAAAUAGCUUGCCUUAUU	278	27	2290	5	7	86	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4091857-4093102	Cluster_6609	Pocillopora_meandrina_HIv1___Sc0000030	4091857	4093102	1246	5064	1343	0.7156398104265402	.	UGUUGUCGAUUAGCUUUGGUACACAGUU	186	72	4301	38	313	123	217	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4101884-4102307	Cluster_6610	Pocillopora_meandrina_HIv1___Sc0000030	4101884	4102307	424	274	63	0.5547445255474452	.	UCUUCUAGCUCGACUUCACGCA	33	123	1	70	59	19	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4165619-4166034	Cluster_6611	Pocillopora_meandrina_HIv1___Sc0000030	4165619	4166034	416	176	19	1.0	+	UAUUAAUGCUGUAGG	76	176	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4407822-4408603	Cluster_6612	Pocillopora_meandrina_HIv1___Sc0000030	4407822	4408603	782	1533	747	0.0019569471624266144	-	UGGAAAUGAUGAAAAUUGGUUU	30	488	509	165	177	103	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4490492-4491402	Cluster_6613	Pocillopora_meandrina_HIv1___Sc0000030	4490492	4491402	911	1131	446	0.9062776304155614	+	UGUGUGUCUGAAUGGUCCUUGUGGAACA	63	18	1058	9	11	19	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4491505-4491930	Cluster_6614	Pocillopora_meandrina_HIv1___Sc0000030	4491505	4491930	426	184	109	0.9130434782608695	+	UGAGCUCGAACGAUCCAGUACUUUGUU	13	2	178	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4493118-4494019	Cluster_6615	Pocillopora_meandrina_HIv1___Sc0000030	4493118	4494019	902	967	314	0.9069286452947259	+	UGAGACUUGUUGUUGGGUAACUGACGUG	125	12	908	6	2	12	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4494056-4496075	Cluster_6616	Pocillopora_meandrina_HIv1___Sc0000030	4494056	4496075	2020	6356	1663	0.7874449339207048	.	UGAAGUCUGACCGGAAGAUCGCAUAGUC	449	253	5637	27	45	182	212	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4522602-4523017	Cluster_6617	Pocillopora_meandrina_HIv1___Sc0000030	4522602	4523017	416	138	75	0.08695652173913043	-	UUUGACGUUCUUGCUUCUGUCUCACCAG	18	6	126	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4528996-4529423	Cluster_6618	Pocillopora_meandrina_HIv1___Sc0000030	4528996	4529423	428	104	13	1.0	+	UUGUCUACGAGAAGCCUGUCCAUUUUGU	89	5	99	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000030:4530096-4530525	Cluster_6619	Pocillopora_meandrina_HIv1___Sc0000030	4530096	4530525	430	2245	79	0.977728285077951	+	UUAACUCCACGGUGCCAAUGACUUUCUU	772	5	2214	3	1	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:189661-190091	Cluster_6620	Pocillopora_meandrina_HIv1___Sc0000031	189661	190091	431	232	58	1.0	+	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	71	2	227	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:228829-229279	Cluster_6621	Pocillopora_meandrina_HIv1___Sc0000031	228829	229279	451	928	184	0.9989224137931034	+	GACGAGGUGGCCGAGUGG	164	793	63	14	23	27	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:308440-308868	Cluster_6622	Pocillopora_meandrina_HIv1___Sc0000031	308440	308868	429	113	54	0.11504424778761062	-	AAAGUUAUGAAUAAAAGGAUCUCUGAAGUG	13	0	100	0	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:687296-687714	Cluster_6623	Pocillopora_meandrina_HIv1___Sc0000031	687296	687714	419	88	24	0.9886363636363636	+	AAAGAAGUACAAGUGGUGA	22	75	0	13	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:840559-840994	Cluster_6624	Pocillopora_meandrina_HIv1___Sc0000031	840559	840994	436	344	246	0.00872093023255814	-	GAGGUGCUAGAACAAGACA	11	128	113	26	44	20	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:851738-852138	Cluster_6625	Pocillopora_meandrina_HIv1___Sc0000031	851738	852138	401	140	102	0.007142857142857143	-	AAGGUCUCCGUUGGU	7	74	29	17	6	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:852697-853125	Cluster_6626	Pocillopora_meandrina_HIv1___Sc0000031	852697	853125	429	126	48	0.9920634920634921	+	AUUGGUGAAAGAGUAAGAUUCUGGUUGCG	48	1	114	4	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:857199-857628	Cluster_6627	Pocillopora_meandrina_HIv1___Sc0000031	857199	857628	430	354	38	1.0	+	UGAAGAUGGAAUCAAGAAAUGCAAAACAGG	149	0	354	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:950692-951110	Cluster_6628	Pocillopora_meandrina_HIv1___Sc0000031	950692	951110	419	1688	24	0.0	-	UAUUAGUGCUGUAGGUGAA	1406	1688	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:978865-979284	Cluster_6629	Pocillopora_meandrina_HIv1___Sc0000031	978865	979284	420	79	15	0.02531645569620253	-	AGACGAAGGACUAACGCUCGAAA	21	9	0	12	12	35	11	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1104429-1104843	Cluster_6630	Pocillopora_meandrina_HIv1___Sc0000031	1104429	1104843	415	482	6	1.0	+	AGGAGAACGUAGGGC	466	482	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1353862-1354290	Cluster_6631	Pocillopora_meandrina_HIv1___Sc0000031	1353862	1354290	429	262	67	0.9236641221374046	+	GUGUAGAUCAGCCGACUUCAAUAUGUUU	75	22	222	3	5	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1455545-1457074	Cluster_6632	Pocillopora_meandrina_HIv1___Sc0000031	1455545	1457074	1530	2102	766	0.8710751665080876	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	110	38	1905	9	14	53	83	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1584679-1585097	Cluster_6633	Pocillopora_meandrina_HIv1___Sc0000031	1584679	1585097	419	16726	55	0.0	-	UCCCCGCAUCUCCACCA	11958	16726	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1782267-1782719	Cluster_6634	Pocillopora_meandrina_HIv1___Sc0000031	1782267	1782719	453	2205	230	0.9977324263038548	+	GACGAGGUGGCCGAG	354	2100	43	18	18	14	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1884998-1885415	Cluster_6635	Pocillopora_meandrina_HIv1___Sc0000031	1884998	1885415	418	230	37	1.0	+	CUUGAAGCGGUUGGCU	62	223	3	0	2	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:1938093-1938628	Cluster_6636	Pocillopora_meandrina_HIv1___Sc0000031	1938093	1938628	536	487	143	0.2299794661190965	.	UGCAUUCUUUCUUUUCCACUGAAAUUCC	33	12	436	0	3	5	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2002024-2002452	Cluster_6637	Pocillopora_meandrina_HIv1___Sc0000031	2002024	2002452	429	504	84	0.9761904761904762	+	UACAAACAACAGAAUGUUCGAACGGCU	93	6	475	7	1	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2010008-2010431	Cluster_6638	Pocillopora_meandrina_HIv1___Sc0000031	2010008	2010431	424	112	50	0.09821428571428571	-	UGGAAAGUUCUGUGGUAUGCAAGUCAGC	28	4	93	3	2	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2021776-2022192	Cluster_6639	Pocillopora_meandrina_HIv1___Sc0000031	2021776	2022192	417	1178	11	1.0	+	AAGUGUGCUCUUAACU	682	1178	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2027398-2027814	Cluster_6640	Pocillopora_meandrina_HIv1___Sc0000031	2027398	2027814	417	1117	10	1.0	+	AAGUGUGCUCUUAACU	670	1117	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2041983-2042399	Cluster_6641	Pocillopora_meandrina_HIv1___Sc0000031	2041983	2042399	417	1110	14	0.9990990990990991	+	AAGUGUGCUCUUAACU	671	1110	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2085244-2085670	Cluster_6642	Pocillopora_meandrina_HIv1___Sc0000031	2085244	2085670	427	190	115	0.9052631578947369	+	UAUUCCAAGAUUGGCCGUACCAGAGACA	18	4	174	3	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2339148-2339563	Cluster_6643	Pocillopora_meandrina_HIv1___Sc0000031	2339148	2339563	416	217	12	1.0	+	GGGCCUGUAGCUUAGU	160	214	2	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2457665-2458080	Cluster_6644	Pocillopora_meandrina_HIv1___Sc0000031	2457665	2458080	416	130	17	0.007692307692307693	-	GGUGUGCUCUUAACGG	51	130	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2469935-2470363	Cluster_6645	Pocillopora_meandrina_HIv1___Sc0000031	2469935	2470363	429	2626	85	1.0	+	UUCCUGUAAUGGUUUGCACAUCGUCUGGC	1553	5	2616	0	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2609712-2610141	Cluster_6646	Pocillopora_meandrina_HIv1___Sc0000031	2609712	2610141	430	160	29	0.0	-	AAAAUACUGAAGUGUGCUAGUAAUGAUGAC	96	3	156	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2621728-2622157	Cluster_6647	Pocillopora_meandrina_HIv1___Sc0000031	2621728	2622157	430	2800	139	0.9992857142857143	+	GUGAUAAGAAACAUGCUCUGAGCUU	902	680	1658	117	54	221	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2642435-2642850	Cluster_6648	Pocillopora_meandrina_HIv1___Sc0000031	2642435	2642850	416	210	145	1.0	+	AUUACCGUUGCUACGCGGAUGAAGAGGCU	8	92	57	16	17	20	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2645497-2645918	Cluster_6649	Pocillopora_meandrina_HIv1___Sc0000031	2645497	2645918	422	290	205	0.9896551724137931	+	GGCUAAAAGGACGUGUCACACUCAACA	6	90	107	32	16	20	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2651920-2652331	Cluster_6650	Pocillopora_meandrina_HIv1___Sc0000031	2651920	2652331	412	254	187	0.9921259842519685	+	GUGUGGAGUCCUGUAAAACCAUUUUGGCUU	8	76	121	20	12	10	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2661085-2661507	Cluster_6651	Pocillopora_meandrina_HIv1___Sc0000031	2661085	2661507	423	290	208	0.996551724137931	+	GGAUGGAGUCUGAAGAAUU	7	99	98	13	32	28	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2663002-2663419	Cluster_6652	Pocillopora_meandrina_HIv1___Sc0000031	2663002	2663419	418	296	198	0.9763513513513513	+	UUCAUGGUGACAACUUUGACUGGACA	8	131	91	26	21	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2665484-2666077	Cluster_6653	Pocillopora_meandrina_HIv1___Sc0000031	2665484	2666077	594	319	215	0.9968652037617555	+	AGGGACUGCGUGGAAAGCU	15	139	92	21	28	9	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2666313-2666858	Cluster_6654	Pocillopora_meandrina_HIv1___Sc0000031	2666313	2666858	546	333	231	0.984984984984985	+	GACAUAGCGAUCGAUGACAUAACAU	7	90	145	35	30	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2671298-2671706	Cluster_6655	Pocillopora_meandrina_HIv1___Sc0000031	2671298	2671706	409	175	128	0.9942857142857143	+	AACGACACGGCUGGAUUGGUUAGU	5	61	59	9	12	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2671864-2672313	Cluster_6656	Pocillopora_meandrina_HIv1___Sc0000031	2671864	2672313	450	218	145	1.0	+	CGUGGCAAAAAGUUGGCUCUCA	7	49	86	14	25	24	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2679984-2680394	Cluster_6657	Pocillopora_meandrina_HIv1___Sc0000031	2679984	2680394	411	222	166	1.0	+	GCAGCGAGUAGACUGUGGCUAU	9	92	64	18	24	10	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2688633-2689044	Cluster_6658	Pocillopora_meandrina_HIv1___Sc0000031	2688633	2689044	412	248	193	0.9798387096774194	+	GACGACUGUGGUGAUAACUCAGAUGAAGU	6	77	96	9	23	26	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2689280-2689700	Cluster_6659	Pocillopora_meandrina_HIv1___Sc0000031	2689280	2689700	421	219	166	0.9954337899543378	+	GGGACCUAUGUUCGACCACACUCUC	5	71	99	10	13	14	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2691784-2692205	Cluster_6660	Pocillopora_meandrina_HIv1___Sc0000031	2691784	2692205	422	226	130	1.0	+	CAAGAGCGGCAGUGCCUGGACU	17	83	52	13	42	22	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2693226-2693643	Cluster_6661	Pocillopora_meandrina_HIv1___Sc0000031	2693226	2693643	418	266	211	0.9962406015037594	+	GAUUUCUCUGAUGAUUGUGGUGAUGAGAG	4	87	87	24	26	20	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2693729-2694134	Cluster_6662	Pocillopora_meandrina_HIv1___Sc0000031	2693729	2694134	406	184	135	0.9945652173913043	+	GACAGGACCGUUGAAGGGA	6	85	44	16	9	14	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2694855-2695658	Cluster_6663	Pocillopora_meandrina_HIv1___Sc0000031	2694855	2695658	804	604	432	0.9950331125827815	+	AACAUCGGAUAUCUGCAGGU	11	191	219	51	61	53	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2695761-2696222	Cluster_6664	Pocillopora_meandrina_HIv1___Sc0000031	2695761	2696222	462	304	222	1.0	+	UCCGGUGCGAUAGUGGACACU	6	107	96	31	23	29	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2698211-2698629	Cluster_6665	Pocillopora_meandrina_HIv1___Sc0000031	2698211	2698629	419	265	159	0.9962264150943396	+	CAAAGGAUAUGUGCAACUGGAGUAACUCCA	12	98	92	26	9	21	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2700120-2700524	Cluster_6666	Pocillopora_meandrina_HIv1___Sc0000031	2700120	2700524	405	317	214	0.917981072555205	+	CUUUCCGAAGUCGCA	11	122	120	15	19	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2701372-2701782	Cluster_6667	Pocillopora_meandrina_HIv1___Sc0000031	2701372	2701782	411	229	161	0.9868995633187773	+	GUUCGGCUGCGUCAGUGAUGGCA	5	83	81	17	12	22	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2702731-2703137	Cluster_6668	Pocillopora_meandrina_HIv1___Sc0000031	2702731	2703137	407	155	112	1.0	+	AUGGCUGCAGGGAACU	7	74	37	17	4	10	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2703836-2704285	Cluster_6669	Pocillopora_meandrina_HIv1___Sc0000031	2703836	2704285	450	289	172	0.9965397923875432	+	CAGUCAGGGACCUUGCGACU	13	130	50	34	25	27	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2704509-2704956	Cluster_6670	Pocillopora_meandrina_HIv1___Sc0000031	2704509	2704956	448	369	278	1.0	+	AUAUGCAGAACGUGUGGAGCAAAGUU	6	127	148	19	32	21	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2705918-2706347	Cluster_6671	Pocillopora_meandrina_HIv1___Sc0000031	2705918	2706347	430	332	204	0.9909638554216867	+	ACCCGGCUAGCUCAG	21	134	93	26	36	21	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2706831-2707232	Cluster_6672	Pocillopora_meandrina_HIv1___Sc0000031	2706831	2707232	402	320	250	0.990625	+	GAUCGGAUCAAGACAACUAUUGAAGGU	9	113	135	13	25	15	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2708475-2708898	Cluster_6673	Pocillopora_meandrina_HIv1___Sc0000031	2708475	2708898	424	302	222	0.9966887417218543	+	GAACAUGGUCUAUGUCUGUACU	6	84	143	24	19	19	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2710378-2710796	Cluster_6674	Pocillopora_meandrina_HIv1___Sc0000031	2710378	2710796	419	324	237	0.9938271604938271	+	AAAAUGACUGUGGAGACAACU	11	104	102	38	17	33	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2713483-2713891	Cluster_6675	Pocillopora_meandrina_HIv1___Sc0000031	2713483	2713891	409	188	125	1.0	+	UCUGGAAAUCGAGAG	16	90	36	21	11	23	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2714892-2715406	Cluster_6676	Pocillopora_meandrina_HIv1___Sc0000031	2714892	2715406	515	434	233	1.0	+	CAGGACUGUACUGAUGGCGAAGAUGAACUC	70	111	233	21	23	22	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2718804-2719218	Cluster_6677	Pocillopora_meandrina_HIv1___Sc0000031	2718804	2719218	415	318	246	0.9905660377358491	+	GCAUCCGACUGUGGCCGGC	8	153	74	28	22	21	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2719463-2720010	Cluster_6678	Pocillopora_meandrina_HIv1___Sc0000031	2719463	2720010	548	372	234	0.9946236559139785	+	AACGGUGUGGAUUGCCAGAGAGCU	9	144	124	32	20	18	34	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2723553-2723968	Cluster_6679	Pocillopora_meandrina_HIv1___Sc0000031	2723553	2723968	416	147	103	0.9795918367346939	+	AAUUACAACGGUGCAAGAUGUCAGAACUGUA	5	36	63	14	12	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2724658-2725074	Cluster_6680	Pocillopora_meandrina_HIv1___Sc0000031	2724658	2725074	417	176	111	0.9886363636363636	+	CUUCUGACUAUGUCGGCCAACGAUGUGACA	21	44	97	9	9	13	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:2728505-2728923	Cluster_6681	Pocillopora_meandrina_HIv1___Sc0000031	2728505	2728923	419	227	161	0.9955947136563876	+	GAAAACGAGACUAGAAGAACAUUGCUGUCU	5	56	94	26	22	15	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3008660-3009316	Cluster_6682	Pocillopora_meandrina_HIv1___Sc0000031	3008660	3009316	657	2217	765	0.0045105999097880016	-	GUUGUGAUCACUGGAGUAGUUAGGACAGU	72	910	753	138	104	156	156	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3010334-3010901	Cluster_6683	Pocillopora_meandrina_HIv1___Sc0000031	3010334	3010901	568	1157	431	0.000864304235090752	-	ACCUUCCCUUUAAAAGCACCACACU	100	227	640	42	80	83	85	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3146487-3146911	Cluster_6684	Pocillopora_meandrina_HIv1___Sc0000031	3146487	3146911	425	142	61	0.11971830985915492	-	UGUUGCAUACAAGAUCUCCUGGUUGUAAGA	29	0	131	0	5	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3147356-3148464	Cluster_6685	Pocillopora_meandrina_HIv1___Sc0000031	3147356	3148464	1109	948	464	0.2858649789029536	.	GAUGAGGCUCAUAAA	52	74	835	4	6	7	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3160689-3161116	Cluster_6686	Pocillopora_meandrina_HIv1___Sc0000031	3160689	3161116	428	107	7	0.0	-	UACCAAGGUCUUGUAGUCUAGUACAACU	64	0	106	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3163105-3164114	Cluster_6687	Pocillopora_meandrina_HIv1___Sc0000031	3163105	3164114	1010	1090	295	0.9412844036697248	+	UCAAAUACAACACCAAAAGAC	229	54	713	284	4	12	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3181659-3182069	Cluster_6688	Pocillopora_meandrina_HIv1___Sc0000031	3181659	3182069	411	122	81	0.6885245901639344	.	UUGUCGGGAUAUGUAGUUGCA	12	50	10	41	18	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3190505-3190919	Cluster_6689	Pocillopora_meandrina_HIv1___Sc0000031	3190505	3190919	415	237	174	0.004219409282700422	-	CCUCUGUAGAUUAGUAAAUGGGCU	8	84	69	18	11	32	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3198438-3198858	Cluster_6690	Pocillopora_meandrina_HIv1___Sc0000031	3198438	3198858	421	94	27	0.0	-	AAGGGCAAGGAUGACAAUUACAUU	26	7	10	5	16	25	31	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3273943-3274358	Cluster_6691	Pocillopora_meandrina_HIv1___Sc0000031	3273943	3274358	416	634	16	0.0	-	CGAGUUAGAUAGAAUA	602	622	10	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3318396-3318825	Cluster_6692	Pocillopora_meandrina_HIv1___Sc0000031	3318396	3318825	430	207	50	0.7101449275362319	.	UAGUGUUUGUAUUGUUGGAAUAAAUGGUCA	41	14	182	5	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3335148-3335573	Cluster_6693	Pocillopora_meandrina_HIv1___Sc0000031	3335148	3335573	426	168	70	0.9940476190476191	+	UGAUUGACGUACGGUAUUUGAGACGC	21	4	153	2	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3369381-3369798	Cluster_6694	Pocillopora_meandrina_HIv1___Sc0000031	3369381	3369798	418	137	47	0.014598540145985401	-	UAAUAUGUGAUGAACUUA	41	84	50	0	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3548527-3549587	Cluster_6695	Pocillopora_meandrina_HIv1___Sc0000031	3548527	3549587	1061	4880	753	0.19795081967213116	-	UGUAAGUGCAUCUGUUGACUUUUGAAGA	1749	53	4435	17	208	59	108	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3551577-3552004	Cluster_6696	Pocillopora_meandrina_HIv1___Sc0000031	3551577	3552004	428	190	76	0.11052631578947368	-	UUAAAUGGCUUGUAAUGACUAAUAAACA	32	0	187	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3648357-3648774	Cluster_6697	Pocillopora_meandrina_HIv1___Sc0000031	3648357	3648774	418	316	19	0.990506329113924	+	GCUACUUUGACCUCACU	175	314	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3651114-3651647	Cluster_6698	Pocillopora_meandrina_HIv1___Sc0000031	3651114	3651647	534	821	252	0.001218026796589525	-	UUUGCCCUUAGAGGUGUUGCUCUUCA	84	76	371	45	85	173	71	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3673549-3673970	Cluster_6699	Pocillopora_meandrina_HIv1___Sc0000031	3673549	3673970	422	167	78	0.029940119760479042	-	UGACACCAUAGUGCUCUAACUUCUGUAA	15	2	152	1	6	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3674200-3674615	Cluster_6700	Pocillopora_meandrina_HIv1___Sc0000031	3674200	3674615	416	108	64	0.009259259259259259	-	UGACGAUUUUCGCGGCUCGAUUUUGU	10	1	106	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3832189-3832605	Cluster_6701	Pocillopora_meandrina_HIv1___Sc0000031	3832189	3832605	417	118	18	0.13559322033898305	-	CGGCCUGAAAAAAAAAA	54	114	0	3	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3863646-3864063	Cluster_6702	Pocillopora_meandrina_HIv1___Sc0000031	3863646	3864063	418	81	30	0.9506172839506173	+	CCAGGACAUAUUUUCGUUAACCGGUACACC	21	10	52	1	2	14	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3872540-3872947	Cluster_6703	Pocillopora_meandrina_HIv1___Sc0000031	3872540	3872947	408	178	126	0.37640449438202245	.	UCUUCUCUUUUGUGCGGACA	9	109	13	36	10	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3882014-3882836	Cluster_6704	Pocillopora_meandrina_HIv1___Sc0000031	3882014	3882836	823	629	101	0.9968203497615262	+	CCAGGAUAUAGAAUGUUGGUUUGCACUGC	140	18	530	2	4	2	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3894259-3894687	Cluster_6705	Pocillopora_meandrina_HIv1___Sc0000031	3894259	3894687	429	247	64	0.9635627530364372	+	UGCAUGUGCUUUGUCUUGGAUUUCAUAGU	52	12	227	1	4	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3894807-3895230	Cluster_6706	Pocillopora_meandrina_HIv1___Sc0000031	3894807	3895230	424	150	65	0.7933333333333333	.	UGUUACAAAACCAUUAGAACUAUCAGUU	24	4	123	2	0	5	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3896116-3897020	Cluster_6707	Pocillopora_meandrina_HIv1___Sc0000031	3896116	3897020	905	2126	510	0.7986829727187206	.	UCCUGACAUGAUUCUUUGAGUUCUUUC	236	48	1886	26	21	48	97	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:3902215-3902722	Cluster_6708	Pocillopora_meandrina_HIv1___Sc0000031	3902215	3902722	508	4494	365	0.9283489096573209	+	UUAUAUCUUCGGUCAAAAAGUGCACUUU	1300	10	4350	8	6	9	111	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4007449-4007866	Cluster_6709	Pocillopora_meandrina_HIv1___Sc0000031	4007449	4007866	418	393	14	0.017811704834605598	-	CGGCCUGAAAAAAAAAA	277	391	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4019453-4019988	Cluster_6710	Pocillopora_meandrina_HIv1___Sc0000031	4019453	4019988	536	3008	444	0.0003324468085106383	-	AUCCUCCUUUGUUCCAGUGGCUGUGUU	480	243	2357	50	64	67	227	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4163166-4163586	Cluster_6711	Pocillopora_meandrina_HIv1___Sc0000031	4163166	4163586	421	94	31	1.0	+	UCUUCGUUAGCGUUGUUCGAAAUCUAUAAG	26	0	92	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000031:4501137-4501681	Cluster_6712	Pocillopora_meandrina_HIv1___Sc0000031	4501137	4501681	545	2875	398	0.9986086956521739	+	UUUGCCUUGAUAAGUGUUGCUCUGUCA	439	150	2143	26	132	361	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:4496-5713	Cluster_6713	Pocillopora_meandrina_HIv1___Sc0000032	4496	5713	1218	7788	734	0.9198767334360555	+	UGACGGAAAAGCGAUUCUCCCCUGACAAGGC	1862	59	7342	22	21	201	143	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:35625-36051	Cluster_6714	Pocillopora_meandrina_HIv1___Sc0000032	35625	36051	427	314	93	0.9522292993630573	+	UGACUAUUCAACAGCUGUUCUUCUACCA	55	4	285	1	4	7	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:554647-555065	Cluster_6715	Pocillopora_meandrina_HIv1___Sc0000032	554647	555065	419	152	57	0.9868421052631579	+	UGAAAAACUGUGACCG	14	91	6	29	20	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:591284-591713	Cluster_6716	Pocillopora_meandrina_HIv1___Sc0000032	591284	591713	430	287	74	0.06968641114982578	-	UGAACAAGUGAGCAAGAUGAUCUUCAUGAA	109	0	277	0	3	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:592847-593274	Cluster_6717	Pocillopora_meandrina_HIv1___Sc0000032	592847	593274	428	107	35	0.018691588785046728	-	AUGUUUACCAGAGUCGAAAUGAAUCGCC	26	0	103	0	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:680956-681371	Cluster_6718	Pocillopora_meandrina_HIv1___Sc0000032	680956	681371	416	218	16	0.0045871559633027525	-	AUAGAAUGAUGAUGCA	182	212	0	5	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:705796-706224	Cluster_6719	Pocillopora_meandrina_HIv1___Sc0000032	705796	706224	429	173	42	0.057803468208092484	-	AUCUAAACGAACUUGUUUUUCUUAUGAACA	49	2	160	0	1	4	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:732298-734036	Cluster_6720	Pocillopora_meandrina_HIv1___Sc0000032	732298	734036	1739	2683	1094	0.049944092433842714	-	UGAGACCGUUGAUGAUAGCAUCACUAUC	99	28	2540	5	27	36	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:906845-907303	Cluster_6721	Pocillopora_meandrina_HIv1___Sc0000032	906845	907303	459	4424	312	0.9990958408679927	+	GGGGAUGUAGCUCAGUGGU	1177	2786	1076	145	74	84	259	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:976625-977084	Cluster_6722	Pocillopora_meandrina_HIv1___Sc0000032	976625	977084	460	270	185	0.011111111111111112	-	GUACUGUGGAAAAUGCU	7	109	76	31	21	19	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:977545-977959	Cluster_6723	Pocillopora_meandrina_HIv1___Sc0000032	977545	977959	415	256	179	0.0	-	GGCAAGCAGUUGGAAGAUGGACGUACC	12	94	96	17	22	13	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:978627-979053	Cluster_6724	Pocillopora_meandrina_HIv1___Sc0000032	978627	979053	427	202	131	0.0049504950495049506	-	CUCUGACUGGGAAGACCAU	10	91	59	14	8	15	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1022751-1023800	Cluster_6725	Pocillopora_meandrina_HIv1___Sc0000032	1022751	1023800	1050	756	354	0.7976190476190477	.	UAUAUGAUCAGUCUGAGUCUAGCCCAGG	32	4	713	4	5	18	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1024060-1024490	Cluster_6726	Pocillopora_meandrina_HIv1___Sc0000032	1024060	1024490	431	636	207	0.9150943396226415	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	93	3	546	4	0	10	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1036766-1037180	Cluster_6727	Pocillopora_meandrina_HIv1___Sc0000032	1036766	1037180	415	111	7	0.0	-	CUUUCCGAGGUCGCA	101	110	0	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1084086-1085480	Cluster_6728	Pocillopora_meandrina_HIv1___Sc0000032	1084086	1085480	1395	16710	6115	0.9991621783363256	+	GAUCUGGAUGAGAAUUGCU	120	6107	5902	1112	1411	1094	1084	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1118221-1118745	Cluster_6729	Pocillopora_meandrina_HIv1___Sc0000032	1118221	1118745	525	413	174	0.11138014527845036	-	UUGGACCAAGAUAGGCUGCUUUAGCAAGU	28	13	385	2	3	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1287751-1288194	Cluster_6730	Pocillopora_meandrina_HIv1___Sc0000032	1287751	1288194	444	343	178	0.9912536443148688	+	GGAGAGAAGUCCUUUGAAUCCUUUGAAAGA	22	49	242	15	8	16	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1289450-1289886	Cluster_6731	Pocillopora_meandrina_HIv1___Sc0000032	1289450	1289886	437	207	142	1.0	+	GUUUAGCUGCGAUGUAUUUUCUGUG	7	65	78	22	15	18	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1290726-1291993	Cluster_6732	Pocillopora_meandrina_HIv1___Sc0000032	1290726	1291993	1268	1225	693	0.9983673469387755	+	CUCGGAAAUUUUGCAAAGAAACUGACAA	20	478	423	62	93	102	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1292775-1293294	Cluster_6733	Pocillopora_meandrina_HIv1___Sc0000032	1292775	1293294	520	744	520	0.9973118279569892	+	GGAAACUGAAGGCUCAGCACGGUG	7	249	269	55	65	54	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1293439-1293866	Cluster_6734	Pocillopora_meandrina_HIv1___Sc0000032	1293439	1293866	428	410	303	1.0	+	UAAGAACCUCUUCCCCCA	7	132	179	19	29	19	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1332112-1332537	Cluster_6735	Pocillopora_meandrina_HIv1___Sc0000032	1332112	1332537	426	102	27	1.0	+	UGAGAUAGAAUUCUGUAAAAGCAGAAAGCU	19	16	81	0	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1333095-1333525	Cluster_6736	Pocillopora_meandrina_HIv1___Sc0000032	1333095	1333525	431	331	61	1.0	+	CAUAAUCUGACACUUUACCUCGCCUUUAGUU	71	0	325	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1334774-1335201	Cluster_6737	Pocillopora_meandrina_HIv1___Sc0000032	1334774	1335201	428	103	31	1.0	+	UGUGCCAAAGGUUUAGAACGAAAGAACG	30	0	101	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1335767-1336197	Cluster_6738	Pocillopora_meandrina_HIv1___Sc0000032	1335767	1336197	431	552	100	0.9981884057971014	+	CACCAAAACUGUACACAUCAACCUUAAAA	151	7	527	2	2	9	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1336655-1337342	Cluster_6739	Pocillopora_meandrina_HIv1___Sc0000032	1336655	1337342	688	736	269	0.9660326086956522	+	UUCUAUGGUAUGCAAGUCAGCAUGACUCAGC	57	35	676	8	3	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1338475-1339347	Cluster_6740	Pocillopora_meandrina_HIv1___Sc0000032	1338475	1339347	873	1173	268	0.9872122762148338	+	UCGGAUAUAAGGCGGUUAUCAAGCGCUCA	127	17	1122	4	6	3	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1553445-1553862	Cluster_6741	Pocillopora_meandrina_HIv1___Sc0000032	1553445	1553862	418	3112	55	0.0006426735218508997	-	GAGAUUGCUGUAGGCU	883	3111	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1645916-1646410	Cluster_6742	Pocillopora_meandrina_HIv1___Sc0000032	1645916	1646410	495	1539	301	0.9688109161793372	+	AAUGGGAAAACGAGAACAGCGUGA	191	42	881	26	16	272	302	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1728758-1729173	Cluster_6743	Pocillopora_meandrina_HIv1___Sc0000032	1728758	1729173	416	141	79	0.028368794326241134	-	AGAGUUUUGAAGUAAAUCGGCGAAUCGUU	12	1	121	1	1	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1742365-1742803	Cluster_6744	Pocillopora_meandrina_HIv1___Sc0000032	1742365	1742803	439	309	124	0.2783171521035599	.	UUAUUUCCUUCUCAACUGUCCGUCACC	27	14	218	12	19	35	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1830044-1830459	Cluster_6745	Pocillopora_meandrina_HIv1___Sc0000032	1830044	1830459	416	110	14	0.1	-	CCCCGCAUCUCCACCG	79	106	4	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1873092-1873504	Cluster_6746	Pocillopora_meandrina_HIv1___Sc0000032	1873092	1873504	413	116	80	0.0	-	CGCGGGUUAGACUGUGCU	12	71	30	6	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1891335-1891764	Cluster_6747	Pocillopora_meandrina_HIv1___Sc0000032	1891335	1891764	430	94	12	0.9893617021276596	+	GGUAAAUCCAUUGGAGAGAUUUGAGCUCGUG	71	7	86	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1959359-1959775	Cluster_6748	Pocillopora_meandrina_HIv1___Sc0000032	1959359	1959775	417	549	26	0.0	-	GUUGGGGCGGUGUUCC	313	543	6	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1972904-1973319	Cluster_6749	Pocillopora_meandrina_HIv1___Sc0000032	1972904	1973319	416	690	36	0.0	-	AACUUUUGACGGGGG	503	686	1	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:1997294-1997768	Cluster_6750	Pocillopora_meandrina_HIv1___Sc0000032	1997294	1997768	475	7521	555	0.9996011168727563	+	GCGACAGUGGUGUAACGGUUAUCAUGGC	1205	3164	3686	58	151	271	191	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2061737-2062151	Cluster_6751	Pocillopora_meandrina_HIv1___Sc0000032	2061737	2062151	415	77	5	0.974025974025974	+	CGGGAUGUAGCGCAGU	43	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2121789-2122216	Cluster_6752	Pocillopora_meandrina_HIv1___Sc0000032	2121789	2122216	428	86	13	0.9883720930232558	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	30	0	86	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2230250-2230655	Cluster_6753	Pocillopora_meandrina_HIv1___Sc0000032	2230250	2230655	406	193	94	0.24870466321243523	.	UCUUCAUAAUGUCUCUAGGCCUCGCUU	17	8	146	4	20	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2274273-2274682	Cluster_6754	Pocillopora_meandrina_HIv1___Sc0000032	2274273	2274682	410	191	110	0.08376963350785341	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	20	3	178	2	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2345790-2346718	Cluster_6755	Pocillopora_meandrina_HIv1___Sc0000032	2345790	2346718	929	507	316	0.8796844181459567	+	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	15	3	457	2	6	7	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2347077-2347491	Cluster_6756	Pocillopora_meandrina_HIv1___Sc0000032	2347077	2347491	415	235	119	0.9319148936170213	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	20	2	219	1	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2348233-2348660	Cluster_6757	Pocillopora_meandrina_HIv1___Sc0000032	2348233	2348660	428	194	59	0.6907216494845361	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	33	0	152	0	1	4	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2375641-2376066	Cluster_6758	Pocillopora_meandrina_HIv1___Sc0000032	2375641	2376066	426	241	98	0.6804979253112033	.	GUGUAUCCUAUGGUAACAGUUGACGUGA	34	3	231	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2376095-2376521	Cluster_6759	Pocillopora_meandrina_HIv1___Sc0000032	2376095	2376521	427	329	172	0.23404255319148937	.	UCCAACUCUGUUCCAGGUGACA	13	9	267	4	20	18	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2378160-2378587	Cluster_6760	Pocillopora_meandrina_HIv1___Sc0000032	2378160	2378587	428	199	59	0.07035175879396985	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	56	2	188	0	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2412513-2412940	Cluster_6761	Pocillopora_meandrina_HIv1___Sc0000032	2412513	2412940	428	189	82	0.91005291005291	+	UAUACACGUUUAGGAUCUUCAUUUUUGA	73	1	183	0	0	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2414703-2415380	Cluster_6762	Pocillopora_meandrina_HIv1___Sc0000032	2414703	2415380	678	402	228	0.8059701492537313	+	UGAAGAGUGUGCUGUGGAUUGGUCCUGC	29	6	341	2	5	15	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2416192-2416616	Cluster_6763	Pocillopora_meandrina_HIv1___Sc0000032	2416192	2416616	425	244	112	0.7172131147540983	.	ACGUAAGAAAUAUUCCUUUUCAACUGCAGA	31	7	221	2	3	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2453605-2454032	Cluster_6764	Pocillopora_meandrina_HIv1___Sc0000032	2453605	2454032	428	187	108	0.0962566844919786	-	UGACGUCACGAUCUUUGCGCGCUACCAU	17	9	169	0	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2461526-2463348	Cluster_6765	Pocillopora_meandrina_HIv1___Sc0000032	2461526	2463348	1823	26277	2947	0.06439091220458956	-	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2180	250	24940	80	119	335	553	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2596196-2596611	Cluster_6766	Pocillopora_meandrina_HIv1___Sc0000032	2596196	2596611	416	432	34	0.0	-	CUGUGAAUAGGCGGUA	278	432	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2788210-2789661	Cluster_6767	Pocillopora_meandrina_HIv1___Sc0000032	2788210	2789661	1452	1790	837	0.43966480446927375	.	UGUGUCAGAUGCGUUUCAGAAAUGGUU	95	28	1437	13	14	114	184	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2789881-2790538	Cluster_6768	Pocillopora_meandrina_HIv1___Sc0000032	2789881	2790538	658	1105	346	0.08235294117647059	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	103	12	1039	6	3	26	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2790590-2791202	Cluster_6769	Pocillopora_meandrina_HIv1___Sc0000032	2790590	2791202	613	551	225	0.13430127041742287	-	UCUGCGUAAAAGAUUUCUUCACUGAGU	85	13	497	3	5	18	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:2880680-2881094	Cluster_6770	Pocillopora_meandrina_HIv1___Sc0000032	2880680	2881094	415	149	12	0.0	-	GAGACUUGAAGCGGC	73	147	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3114106-3114518	Cluster_6771	Pocillopora_meandrina_HIv1___Sc0000032	3114106	3114518	413	144	84	0.13194444444444445	-	UCUGGAGUCUCGGUC	11	69	60	1	5	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3128253-3128667	Cluster_6772	Pocillopora_meandrina_HIv1___Sc0000032	3128253	3128667	415	76	6	0.9868421052631579	+	GUUGACCUCGGAUCA	45	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3147841-3148258	Cluster_6773	Pocillopora_meandrina_HIv1___Sc0000032	3147841	3148258	418	320	14	1.0	+	UAUUAAUGCUGUAGGCUU	256	314	5	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3170645-3171054	Cluster_6774	Pocillopora_meandrina_HIv1___Sc0000032	3170645	3171054	410	194	121	0.14432989690721648	-	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	15	1	185	1	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3217476-3217899	Cluster_6775	Pocillopora_meandrina_HIv1___Sc0000032	3217476	3217899	424	78	26	0.02564102564102564	-	AAAGAACCCGGUCACCUGUGCUGCAAAGG	33	0	75	1	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3385327-3385741	Cluster_6776	Pocillopora_meandrina_HIv1___Sc0000032	3385327	3385741	415	83	8	0.9759036144578314	+	CGGGGGCGUGUUGUC	64	83	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000032:3521771-3522185	Cluster_6777	Pocillopora_meandrina_HIv1___Sc0000032	3521771	3522185	415	171	14	1.0	+	AUUGGAUCCGGCCCA	141	166	3	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:64932-65347	Cluster_6778	Pocillopora_meandrina_HIv1___Sc0000033	64932	65347	416	131	12	0.0	-	UUGACAACUUUUGACA	63	130	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:189713-190129	Cluster_6779	Pocillopora_meandrina_HIv1___Sc0000033	189713	190129	417	1448	55	0.9979281767955801	+	AACUUUUGACGGUGG	736	1442	4	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:205780-206208	Cluster_6780	Pocillopora_meandrina_HIv1___Sc0000033	205780	206208	429	117	39	0.0	-	AUGCAGUUGAAGAAACUAGUUAGACAAGG	25	6	107	1	3	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:352602-353035	Cluster_6781	Pocillopora_meandrina_HIv1___Sc0000033	352602	353035	434	19002	501	0.9981580886222503	+	UACAACGGGGACUAGCUCCGAUCUCUCAAG	2999	91	18878	11	4	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:510947-511358	Cluster_6782	Pocillopora_meandrina_HIv1___Sc0000033	510947	511358	412	86	16	1.0	+	ACUGCUGCCGGUCGUG	42	86	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:512580-513003	Cluster_6783	Pocillopora_meandrina_HIv1___Sc0000033	512580	513003	424	131	68	0.9923664122137404	+	AUAGUGGCACCGACUUUGAAGUAUGGAUU	7	5	121	3	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:534254-534684	Cluster_6784	Pocillopora_meandrina_HIv1___Sc0000033	534254	534684	431	346	74	0.014450867052023121	-	UGGCUGGGAACCAACCUCGGAGAAAAUGAC	72	14	297	11	1	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:534887-535315	Cluster_6785	Pocillopora_meandrina_HIv1___Sc0000033	534887	535315	429	139	34	0.0	-	AGCAUUUCCCGAGGGUCUGACUUACGACA	35	2	136	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:542928-544164	Cluster_6786	Pocillopora_meandrina_HIv1___Sc0000033	542928	544164	1237	5104	1085	0.11324451410658307	-	UAUUUGAUCUGUCUACCUCUUUAAAGGA	243	312	4398	182	49	41	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:586365-586785	Cluster_6787	Pocillopora_meandrina_HIv1___Sc0000033	586365	586785	421	131	29	0.9770992366412213	+	UUGGAUAUCCUAACACGUGUGA	32	31	1	25	63	10	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:588868-589295	Cluster_6788	Pocillopora_meandrina_HIv1___Sc0000033	588868	589295	428	146	42	0.00684931506849315	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	48	1	143	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:601778-602205	Cluster_6789	Pocillopora_meandrina_HIv1___Sc0000033	601778	602205	428	136	40	0.007352941176470588	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	42	0	134	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:614818-615245	Cluster_6790	Pocillopora_meandrina_HIv1___Sc0000033	614818	615245	428	150	40	0.013333333333333334	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	47	1	146	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:640337-640764	Cluster_6791	Pocillopora_meandrina_HIv1___Sc0000033	640337	640764	428	144	51	0.020833333333333332	-	AGCAUUUCCCGAGGGUCUAACAUACGAC	34	5	134	0	1	4	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:659174-659761	Cluster_6792	Pocillopora_meandrina_HIv1___Sc0000033	659174	659761	588	3680	403	0.9839673913043478	+	UGUAGAAUCAAUCUGUUACUAAGACACC	639	23	3544	65	8	25	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:661531-662065	Cluster_6793	Pocillopora_meandrina_HIv1___Sc0000033	661531	662065	535	543	187	0.8084714548802947	+	UGUAUUCACUUGGGUUAACUCUUCCACA	116	1	527	0	3	8	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:670511-670940	Cluster_6794	Pocillopora_meandrina_HIv1___Sc0000033	670511	670940	430	394	60	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	114	0	393	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:677264-677691	Cluster_6795	Pocillopora_meandrina_HIv1___Sc0000033	677264	677691	428	331	48	0.00906344410876133	-	UAGGUAAAGUCUUUCUGUUGACAGAGUU	128	1	327	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:683227-683663	Cluster_6796	Pocillopora_meandrina_HIv1___Sc0000033	683227	683663	437	51483	720	9.711943748421809e-05	-	AGCAUUUCCCGAAGGUCUGACAUACGAC	11297	223	50852	131	129	67	81	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:703744-704547	Cluster_6797	Pocillopora_meandrina_HIv1___Sc0000033	703744	704547	804	253	63	0.0	-	UGCAAAAGAAGACGCUUGGCUGGGAACCA	61	1	249	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:719371-719799	Cluster_6798	Pocillopora_meandrina_HIv1___Sc0000033	719371	719799	429	97	26	0.0	-	UGCAAAAGAAGACGCUUGGCUGGGAACCA	56	1	95	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:719973-720403	Cluster_6799	Pocillopora_meandrina_HIv1___Sc0000033	719973	720403	431	1049	102	0.0	-	AGCAUUUCCCGAAGGUCUGACAUACGAC	180	5	1038	2	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:743365-743782	Cluster_6800	Pocillopora_meandrina_HIv1___Sc0000033	743365	743782	418	145	82	0.903448275862069	+	GAGUAGAUCAGCCGACUUCAACAUGUUU	19	6	125	3	1	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:747341-747769	Cluster_6801	Pocillopora_meandrina_HIv1___Sc0000033	747341	747769	429	233	56	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	65	1	230	0	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:778352-778780	Cluster_6802	Pocillopora_meandrina_HIv1___Sc0000033	778352	778780	429	745	89	0.9664429530201343	+	GUGUAGAUCAGCCGACUUCAACAUGUUC	152	25	578	7	34	38	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:789486-789913	Cluster_6803	Pocillopora_meandrina_HIv1___Sc0000033	789486	789913	428	225	58	0.0044444444444444444	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	57	0	221	1	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:794105-794535	Cluster_6804	Pocillopora_meandrina_HIv1___Sc0000033	794105	794535	431	264	99	0.011363636363636364	-	UGCUGAAAAUCUGGACUUCUCGUAGAGC	48	2	252	1	0	7	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:809830-810258	Cluster_6805	Pocillopora_meandrina_HIv1___Sc0000033	809830	810258	429	247	48	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGAC	73	3	243	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:819636-820064	Cluster_6806	Pocillopora_meandrina_HIv1___Sc0000033	819636	820064	429	224	47	0.0	-	AGCAUUUCCCGAGGGUCUGACAUACGACA	59	0	221	1	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:831472-831899	Cluster_6807	Pocillopora_meandrina_HIv1___Sc0000033	831472	831899	428	125	32	1.0	+	AGCAUUUCCCGAGGGUCUAACAUACGAC	40	1	122	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:848924-849351	Cluster_6808	Pocillopora_meandrina_HIv1___Sc0000033	848924	849351	428	163	27	0.9815950920245399	+	UGAAUCGUCGAUGAGAGUGAAUAAUACU	85	2	158	1	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:864987-865401	Cluster_6809	Pocillopora_meandrina_HIv1___Sc0000033	864987	865401	415	93	8	0.043010752688172046	-	UCUGGAGUCUCGGCA	85	90	3	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1073974-1074484	Cluster_6810	Pocillopora_meandrina_HIv1___Sc0000033	1073974	1074484	511	2926	447	0.01674641148325359	-	GGUCCGUUAGCUCAG	445	2591	129	75	66	43	22	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1123428-1123881	Cluster_6811	Pocillopora_meandrina_HIv1___Sc0000033	1123428	1123881	454	1357	97	0.0014738393515106854	-	UUUGCUAGUUGCUUUUGUCCCGUU	354	38	41	33	48	575	622	24	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1435428-1435837	Cluster_6812	Pocillopora_meandrina_HIv1___Sc0000033	1435428	1435837	410	113	63	0.49557522123893805	.	CACCCGGUCAAUUUUGCGUCAAAAAUAAUUU	9	5	91	5	1	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1528802-1529228	Cluster_6813	Pocillopora_meandrina_HIv1___Sc0000033	1528802	1529228	427	161	79	0.9316770186335404	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	21	0	153	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1652824-1653254	Cluster_6814	Pocillopora_meandrina_HIv1___Sc0000033	1652824	1653254	431	627	160	0.9776714513556619	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	166	2	615	0	0	2	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1655295-1655800	Cluster_6815	Pocillopora_meandrina_HIv1___Sc0000033	1655295	1655800	506	567	219	0.48853615520282184	.	UAAGUCUGUAACCCCUGUGGCAC	161	8	302	10	6	217	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1687808-1688227	Cluster_6816	Pocillopora_meandrina_HIv1___Sc0000033	1687808	1688227	420	469	74	0.9957356076759062	+	CACUCUCAUGACCACUUU	65	463	0	6	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1689820-1690239	Cluster_6817	Pocillopora_meandrina_HIv1___Sc0000033	1689820	1690239	420	131	48	0.09923664122137404	-	CCGGGCUACUUCUUCGCAGU	35	83	5	20	1	18	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1752365-1752775	Cluster_6818	Pocillopora_meandrina_HIv1___Sc0000033	1752365	1752775	411	86	27	0.9302325581395349	+	UGAUAUAUGUUCAUGUUUGGGUGUAAGC	25	6	80	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:1935370-1935788	Cluster_6819	Pocillopora_meandrina_HIv1___Sc0000033	1935370	1935788	419	10559	24	0.9999052940619377	+	ACCCCGCAUCUCCACCA	5787	10559	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2087740-2088163	Cluster_6820	Pocillopora_meandrina_HIv1___Sc0000033	2087740	2088163	424	203	102	0.9605911330049262	+	UCAAAAGCUGCCGAUAAAUCUAAA	31	5	154	1	2	4	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2088176-2088602	Cluster_6821	Pocillopora_meandrina_HIv1___Sc0000033	2088176	2088602	427	160	83	0.85625	+	UCAGACUAGCAACAUGAUCUUCGGUGA	25	1	146	2	1	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2089472-2090403	Cluster_6822	Pocillopora_meandrina_HIv1___Sc0000033	2089472	2090403	932	962	339	0.9521829521829522	+	UAAUGACUUCAGAGUAGACAGAGACGGU	76	10	934	5	3	3	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2227624-2228243	Cluster_6823	Pocillopora_meandrina_HIv1___Sc0000033	2227624	2228243	620	779	171	0.6906290115532734	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	150	5	630	3	3	111	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2528642-2529053	Cluster_6824	Pocillopora_meandrina_HIv1___Sc0000033	2528642	2529053	412	110	66	0.16363636363636364	-	UUCUAGACGAGAUCUUUAGUAAAAAGCA	7	18	65	12	10	5	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2557559-2557973	Cluster_6825	Pocillopora_meandrina_HIv1___Sc0000033	2557559	2557973	415	129	10	0.0	-	UUUGUCUGAGGCUGA	112	127	1	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2644728-2645137	Cluster_6826	Pocillopora_meandrina_HIv1___Sc0000033	2644728	2645137	410	156	98	0.46794871794871795	.	UUACUGAACAGACGCACGGC	19	89	6	33	13	13	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2647969-2648391	Cluster_6827	Pocillopora_meandrina_HIv1___Sc0000033	2647969	2648391	423	261	156	0.9808429118773946	+	GAUCAAAGUUGGCCG	12	101	84	21	23	22	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2718101-2718522	Cluster_6828	Pocillopora_meandrina_HIv1___Sc0000033	2718101	2718522	422	327	248	0.0	-	UGAGUAUGUAGACAUUAAGAGACU	5	79	124	29	31	23	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2718874-2719527	Cluster_6829	Pocillopora_meandrina_HIv1___Sc0000033	2718874	2719527	654	658	472	0.0121580547112462	-	AAUGACGAGAAUCGAUGAAUACGUGGACGU	12	192	309	32	40	35	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2866423-2867925	Cluster_6830	Pocillopora_meandrina_HIv1___Sc0000033	2866423	2867925	1503	1737	766	0.046632124352331605	-	UGAUUUCCUCUCUGACAUCUAAAGGUAG	53	11	1625	11	19	30	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2891328-2891743	Cluster_6831	Pocillopora_meandrina_HIv1___Sc0000033	2891328	2891743	416	141	6	0.9858156028368794	+	GAGUGUGCUCUUAGCA	136	141	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2894610-2895027	Cluster_6832	Pocillopora_meandrina_HIv1___Sc0000033	2894610	2895027	418	126	15	0.9682539682539683	+	GACUUUUGACGGUGGAUC	33	126	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2910222-2910664	Cluster_6833	Pocillopora_meandrina_HIv1___Sc0000033	2910222	2910664	443	540	123	0.2388888888888889	.	UGUCAAAUUCUCGUCUUCCUAACCUUU	174	7	511	1	3	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2913085-2913489	Cluster_6834	Pocillopora_meandrina_HIv1___Sc0000033	2913085	2913489	405	75	40	0.09333333333333334	-	UCUUUCCAUUUACAGACUCAAGUGGCUGU	16	2	69	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:2921411-2921823	Cluster_6835	Pocillopora_meandrina_HIv1___Sc0000033	2921411	2921823	413	79	34	0.9240506329113924	+	UGUUGAACCCCUGGCAC	17	42	28	1	0	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3000626-3001042	Cluster_6836	Pocillopora_meandrina_HIv1___Sc0000033	3000626	3001042	417	232	26	0.0	-	AACUUUUGACGGCGGA	51	232	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3079765-3080198	Cluster_6837	Pocillopora_meandrina_HIv1___Sc0000033	3079765	3080198	434	234	80	0.0	-	UGUCUGAACUCUAAAACUUCAUUUGGGAUC	53	6	226	1	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3082789-3083404	Cluster_6838	Pocillopora_meandrina_HIv1___Sc0000033	3082789	3083404	616	654	248	0.41437308868501527	.	UGCAAGAACAAGUUCGCGACGUGGUAUU	98	24	587	11	9	11	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3084271-3084715	Cluster_6839	Pocillopora_meandrina_HIv1___Sc0000033	3084271	3084715	445	582	225	0.003436426116838488	-	UGAAAUAAGAAAUCUUGUAAAGCGACUGAUA	40	10	560	0	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3084987-3085943	Cluster_6840	Pocillopora_meandrina_HIv1___Sc0000033	3084987	3085943	957	2080	483	0.016346153846153847	-	UGAUUGACGUUGACGACAGAAGAAAAACA	214	14	2001	4	13	25	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3086920-3087460	Cluster_6841	Pocillopora_meandrina_HIv1___Sc0000033	3086920	3087460	541	1575	286	0.006984126984126984	-	UCACUCACGAUAGAAUUUUAAACAGAU	194	4	1550	0	3	14	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3093993-3096069	Cluster_6842	Pocillopora_meandrina_HIv1___Sc0000033	3093993	3096069	2077	14539	2201	0.04972831694064241	-	UGUUAGCUCGUCGACCUGAACGCCACUUUC	1514	485	13361	51	159	216	267	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3096363-3096844	Cluster_6843	Pocillopora_meandrina_HIv1___Sc0000033	3096363	3096844	482	422	233	0.030805687203791468	-	UGAUUUUUGUUCUUUUUGUUGAGGCUGCAA	22	5	402	0	4	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3096867-3097773	Cluster_6844	Pocillopora_meandrina_HIv1___Sc0000033	3096867	3097773	907	1456	440	0.0020604395604395605	-	UAAGACAAGUACUUCAAACACUCUCUAGUAG	121	9	1398	6	10	7	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3098436-3101538	Cluster_6845	Pocillopora_meandrina_HIv1___Sc0000033	3098436	3101538	3103	9133	2485	0.16916675791087266	-	UGUUAAAUCUCCUCUAAACUUUGUAAUGA	373	243	7814	124	105	435	412	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3101625-3102135	Cluster_6846	Pocillopora_meandrina_HIv1___Sc0000033	3101625	3102135	511	7784	686	0.21878211716341212	.	UGAUUUCUCUGAUAUUACCAUCAGCGC	927	90	7098	34	286	119	157	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3102350-3102782	Cluster_6847	Pocillopora_meandrina_HIv1___Sc0000033	3102350	3102782	433	3148	260	0.01747141041931385	-	UGCACUAAGCAAUGAUUUGUCACCUGAAUU	1020	28	3092	1	3	4	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3102834-3103816	Cluster_6848	Pocillopora_meandrina_HIv1___Sc0000033	3102834	3103816	983	1203	397	0.012468827930174564	-	UAAAACGAUAUUGCUGACAGAAAAAUAACA	120	16	1153	5	7	8	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3103948-3104677	Cluster_6849	Pocillopora_meandrina_HIv1___Sc0000033	3103948	3104677	730	3363	624	0.0044603033006244425	-	UGAUCAAUCAAGGAAAAUGUCUCGUACUGUU	294	20	3283	2	9	16	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3104763-3110355	Cluster_6850	Pocillopora_meandrina_HIv1___Sc0000033	3104763	3110355	5593	31117	5723	0.007166500626667095	-	UGCAAAGUCCCAUAUAUCCAUUGUAACAUU	1648	452	29666	192	206	306	295	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3110696-3111545	Cluster_6851	Pocillopora_meandrina_HIv1___Sc0000033	3110696	3111545	850	1556	391	0.37660668380462725	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	182	22	1480	12	8	11	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3111595-3112752	Cluster_6852	Pocillopora_meandrina_HIv1___Sc0000033	3111595	3112752	1158	2492	920	0.0008025682182985554	-	UUACCGGUUUGAUGCCAAGACAUUUGA	109	44	2288	26	33	55	46	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3112803-3117488	Cluster_6853	Pocillopora_meandrina_HIv1___Sc0000033	3112803	3117488	4686	62535	6321	0.0012153194211241706	-	UAGGUGCUGCCCUGCAAAUUCCCAUAUAUC	5028	3759	54352	700	1068	1470	1186	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3117976-3118918	Cluster_6854	Pocillopora_meandrina_HIv1___Sc0000033	3117976	3118918	943	27170	747	0.006993006993006993	-	UGCUAUCAACUUAAAUUUAUGAACCUCACU	10576	184	26197	116	116	323	234	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3119235-3125163	Cluster_6855	Pocillopora_meandrina_HIv1___Sc0000033	3119235	3125163	5929	89213	6992	0.0010760763565848027	-	UAGGUGCUGCCCUGCAAAUUCCCAUAUAUC	17798	6988	78286	903	913	1231	892	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3125753-3126547	Cluster_6856	Pocillopora_meandrina_HIv1___Sc0000033	3125753	3126547	795	1823	492	0.0	-	UGAUCUAACUGAUGUUGACUCAUUCUGAC	109	19	1735	6	17	28	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3126776-3127230	Cluster_6857	Pocillopora_meandrina_HIv1___Sc0000033	3126776	3127230	455	321	153	0.003115264797507788	-	UGAGGACUUUGCAUCAGAAAAGACAGUUGUU	33	7	296	7	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3127267-3129880	Cluster_6858	Pocillopora_meandrina_HIv1___Sc0000033	3127267	3129880	2614	8056	1844	0.0021102284011916585	-	UAUCAGCAAAGUGAAGAUAAUGUAGAACCUA	843	382	7398	37	44	107	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000033:3130174-3130636	Cluster_6859	Pocillopora_meandrina_HIv1___Sc0000033	3130174	3130636	463	376	154	0.007978723404255319	-	UCAUCCGACCUUUCGAAAUCUAGCUUGUU	41	14	359	1	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:33075-33504	Cluster_6860	Pocillopora_meandrina_HIv1___Sc0000034	33075	33504	430	804	110	0.007462686567164179	-	ACUGUGUACGAACUCUGUCAAAUGGAUGA	168	15	708	1	5	36	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:106992-107419	Cluster_6861	Pocillopora_meandrina_HIv1___Sc0000034	106992	107419	428	134	40	0.9402985074626866	+	UUCAUGCUCUCGUUGUUCGACUGAACGA	34	0	134	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:167436-167927	Cluster_6862	Pocillopora_meandrina_HIv1___Sc0000034	167436	167927	492	35562	1331	0.00025307912940779483	-	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	9499	3829	31088	79	112	323	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:215119-215548	Cluster_6863	Pocillopora_meandrina_HIv1___Sc0000034	215119	215548	430	516	123	0.07170542635658915	-	UGCAGUAGCUUUGAAAUCGUUGGCGGGU	66	5	490	1	3	12	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:217331-217746	Cluster_6864	Pocillopora_meandrina_HIv1___Sc0000034	217331	217746	416	201	39	0.004975124378109453	-	UUGUUCUAAGAUUUGU	71	161	39	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:218602-219029	Cluster_6865	Pocillopora_meandrina_HIv1___Sc0000034	218602	219029	428	188	55	0.02127659574468085	-	UUUGAGACAUAAACUGUUCAGUUUGAGC	78	2	183	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:233015-234459	Cluster_6866	Pocillopora_meandrina_HIv1___Sc0000034	233015	234459	1445	4325	1334	0.7072832369942197	.	UGCGACUUUCCUUUUCUUUGGCACAA	200	70	3828	37	37	104	249	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:234969-235374	Cluster_6867	Pocillopora_meandrina_HIv1___Sc0000034	234969	235374	406	232	137	0.008620689655172414	-	UCGGCUAACGUUAAACUUCACAGCGUUCUUU	13	6	221	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:236155-236577	Cluster_6868	Pocillopora_meandrina_HIv1___Sc0000034	236155	236577	423	274	139	0.05474452554744526	-	UUGGACAACCUCAUGAGAGUAACCCUCGUC	20	13	244	2	4	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:251674-252102	Cluster_6869	Pocillopora_meandrina_HIv1___Sc0000034	251674	252102	429	170	85	0.11764705882352941	-	UUAGAUCAAUGACUUCUGAGAUGAUGCCUU	13	5	149	3	1	5	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:252438-252864	Cluster_6870	Pocillopora_meandrina_HIv1___Sc0000034	252438	252864	427	183	59	0.04918032786885246	-	UUGAAUGUUUUCUGCACUGUAGAGA	24	4	163	1	3	7	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:254737-255177	Cluster_6871	Pocillopora_meandrina_HIv1___Sc0000034	254737	255177	441	209	87	0.4784688995215311	.	UGAAGACAUAGUAGAAAGAUCACU	19	22	133	0	2	5	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:264353-264780	Cluster_6872	Pocillopora_meandrina_HIv1___Sc0000034	264353	264780	428	182	88	0.0	-	UAACGAUCUUGCUGUCGCUGUUGGGAGC	19	4	171	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:268956-269690	Cluster_6873	Pocillopora_meandrina_HIv1___Sc0000034	268956	269690	735	381	150	0.028871391076115485	-	UAAAUGGCCAUUAUUGAUCUCAGUACAUC	33	9	354	0	7	2	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:273601-274030	Cluster_6874	Pocillopora_meandrina_HIv1___Sc0000034	273601	274030	430	323	73	0.8823529411764706	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	138	3	281	0	0	2	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:281232-281664	Cluster_6875	Pocillopora_meandrina_HIv1___Sc0000034	281232	281664	433	3507	200	0.00028514399771884804	-	UGAACAGACUUGAUGACUACUGCAUAUGCUU	981	2	3494	1	2	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:284152-284563	Cluster_6876	Pocillopora_meandrina_HIv1___Sc0000034	284152	284563	412	120	61	0.008333333333333333	-	UGUGUCGACGAUAGUAACACCAGCUUGAGG	8	5	115	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:300245-301292	Cluster_6877	Pocillopora_meandrina_HIv1___Sc0000034	300245	301292	1048	4569	660	0.001969796454366382	-	UGACAGCUGGCUCUUCUGAGCAUUUAGGAG	512	132	4301	52	15	22	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:303277-303698	Cluster_6878	Pocillopora_meandrina_HIv1___Sc0000034	303277	303698	422	87	42	0.05747126436781609	-	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	20	0	84	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:304345-304926	Cluster_6879	Pocillopora_meandrina_HIv1___Sc0000034	304345	304926	582	434	183	0.03225806451612903	-	UGUAAAGACGUUUUGAGGCUUUGGAGACA	34	8	410	3	1	6	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:306994-307423	Cluster_6880	Pocillopora_meandrina_HIv1___Sc0000034	306994	307423	430	331	114	0.00906344410876133	-	UGAUCAACCAGUAUCGAACAGGAUUUAAGU	87	7	315	0	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:309422-309848	Cluster_6881	Pocillopora_meandrina_HIv1___Sc0000034	309422	309848	427	329	152	0.00911854103343465	-	UGUUCUGUGUUCGUUCUCUGUGAAGGC	34	8	310	2	0	6	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:309881-310309	Cluster_6882	Pocillopora_meandrina_HIv1___Sc0000034	309881	310309	429	414	145	0.00966183574879227	-	UUCUUGUCGCCACUUCUCCCACUGUGGGC	119	16	391	1	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:310314-311240	Cluster_6883	Pocillopora_meandrina_HIv1___Sc0000034	310314	311240	927	2163	525	0.0013869625520110957	-	UGUGAGACAUUGUGAAUCUUCUGACAGCUGC	170	22	2108	6	7	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:311485-311999	Cluster_6884	Pocillopora_meandrina_HIv1___Sc0000034	311485	311999	515	611	149	0.14566284779050737	-	UUCAUUGUGAGGAGAUGAUUCGGUGUUA	84	91	503	4	6	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:377601-378031	Cluster_6885	Pocillopora_meandrina_HIv1___Sc0000034	377601	378031	431	958	138	0.9498956158663883	+	UGAGACAGUACACACGAUUUGAUAU	247	4	936	1	1	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:408804-409230	Cluster_6886	Pocillopora_meandrina_HIv1___Sc0000034	408804	409230	427	151	66	0.2913907284768212	.	UGUGUGCAGUUUUCUCUAAUCUUGUUU	21	1	135	0	1	2	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:443822-444250	Cluster_6887	Pocillopora_meandrina_HIv1___Sc0000034	443822	444250	429	172	42	0.9941860465116279	+	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	70	0	156	0	0	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:564007-564436	Cluster_6888	Pocillopora_meandrina_HIv1___Sc0000034	564007	564436	430	3310	179	0.00030211480362537764	-	UGGAACAUGGUAGGAGAGUGCAUGCAGG	769	62	3167	7	20	17	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:674187-674617	Cluster_6889	Pocillopora_meandrina_HIv1___Sc0000034	674187	674617	431	266	115	0.9924812030075187	+	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	66	4	259	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:832827-833649	Cluster_6890	Pocillopora_meandrina_HIv1___Sc0000034	832827	833649	823	1998	106	0.006006006006006006	-	UUGGACUGUGCAUAACCAUUUGU	1117	11	732	0	37	1159	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:864099-864526	Cluster_6891	Pocillopora_meandrina_HIv1___Sc0000034	864099	864526	428	91	25	0.03296703296703297	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	30	1	87	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:909162-909584	Cluster_6892	Pocillopora_meandrina_HIv1___Sc0000034	909162	909584	423	95	26	0.8526315789473684	+	AGCAUGACGAAGGUUAGAGAUCGAC	33	4	56	1	2	3	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1151290-1151705	Cluster_6893	Pocillopora_meandrina_HIv1___Sc0000034	1151290	1151705	416	615	10	0.0016260162601626016	-	CGCGGGGUAGAGCAGU	507	613	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1411822-1412249	Cluster_6894	Pocillopora_meandrina_HIv1___Sc0000034	1411822	1412249	428	75	14	0.0	-	UGUCCUGGUGUGCCGGUUAACGAAACUUGC	54	0	75	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1425589-1426014	Cluster_6895	Pocillopora_meandrina_HIv1___Sc0000034	1425589	1426014	426	127	51	0.9133858267716536	+	UUAAACCGACUCACAGUCCGAUUCGAAU	31	1	120	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1690392-1690810	Cluster_6896	Pocillopora_meandrina_HIv1___Sc0000034	1690392	1690810	419	467	19	0.01284796573875803	-	UAUUAAUGCUGUAGGUGAU	193	465	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:1758628-1759046	Cluster_6897	Pocillopora_meandrina_HIv1___Sc0000034	1758628	1759046	419	78	32	1.0	+	GCUAGUUGGACACAUAUGUAG	12	16	31	14	10	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2059786-2060212	Cluster_6898	Pocillopora_meandrina_HIv1___Sc0000034	2059786	2060212	427	228	135	0.8552631578947368	+	UGAGUCGAGGUUAUUCACAAUACGAGC	41	13	197	1	1	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2060450-2061107	Cluster_6899	Pocillopora_meandrina_HIv1___Sc0000034	2060450	2061107	658	1186	349	0.8946037099494097	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	105	17	1101	9	5	31	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2061327-2061779	Cluster_6900	Pocillopora_meandrina_HIv1___Sc0000034	2061327	2061779	453	415	200	0.5060240963855421	.	AUAAGAGAUAUAAACUUCUGAAAGCCUGUG	27	2	391	3	4	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2061904-2062549	Cluster_6901	Pocillopora_meandrina_HIv1___Sc0000034	2061904	2062549	646	602	290	0.8106312292358804	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	94	9	539	5	3	11	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2128480-2128893	Cluster_6902	Pocillopora_meandrina_HIv1___Sc0000034	2128480	2128893	414	79	21	0.9620253164556962	+	GUGGAGUGAUUUGUCUA	15	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2161702-2162205	Cluster_6903	Pocillopora_meandrina_HIv1___Sc0000034	2161702	2162205	504	410	163	0.7390243902439024	.	UAAGACGCACUCUACUCUGUUGUCAAUAC	41	33	342	5	4	17	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2221418-2221853	Cluster_6904	Pocillopora_meandrina_HIv1___Sc0000034	2221418	2221853	436	1718	361	1.0	+	GUCUCCCCUUGUCAGAGUGUAUGAAGU	211	169	1294	45	33	93	84	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2262728-2263202	Cluster_6905	Pocillopora_meandrina_HIv1___Sc0000034	2262728	2263202	475	358	134	0.002793296089385475	-	UCUCGGUGGGACCUCC	38	207	113	11	5	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2306697-2307111	Cluster_6906	Pocillopora_meandrina_HIv1___Sc0000034	2306697	2307111	415	2781	8	0.000719165767709457	-	CUUUCCGAGGUCACG	2767	2780	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2382669-2383084	Cluster_6907	Pocillopora_meandrina_HIv1___Sc0000034	2382669	2383084	416	177	60	0.005649717514124294	-	GGCUGACUUUGGUGGA	91	143	18	4	9	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2440726-2441146	Cluster_6908	Pocillopora_meandrina_HIv1___Sc0000034	2440726	2441146	421	124	55	0.5241935483870968	.	CCAAUACCGAAACAACAUAGAUGAACUAAC	18	3	119	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2515370-2515784	Cluster_6909	Pocillopora_meandrina_HIv1___Sc0000034	2515370	2515784	415	92	13	0.8913043478260869	+	CCUUUCCGAGGUCGA	75	85	3	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2581784-2582380	Cluster_6910	Pocillopora_meandrina_HIv1___Sc0000034	2581784	2582380	597	5603	518	0.9957165804033553	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	861	15	5535	3	3	16	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2626176-2626798	Cluster_6911	Pocillopora_meandrina_HIv1___Sc0000034	2626176	2626798	623	934	201	0.9625267665952891	+	UUGUGUGUUUGGCUGGAGCAUCUGCGGC	138	23	864	5	5	14	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2727977-2728402	Cluster_6912	Pocillopora_meandrina_HIv1___Sc0000034	2727977	2728402	426	84	30	0.9880952380952381	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	29	0	84	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2746578-2747174	Cluster_6913	Pocillopora_meandrina_HIv1___Sc0000034	2746578	2747174	597	5629	509	0.9975128797299698	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	809	12	5574	2	6	17	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2812994-2813594	Cluster_6914	Pocillopora_meandrina_HIv1___Sc0000034	2812994	2813594	601	2808	294	0.9811253561253561	+	UAUCAUGGUCUAAAAUUGGUGCUUCAGUU	850	5	2769	0	5	12	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2821751-2822178	Cluster_6915	Pocillopora_meandrina_HIv1___Sc0000034	2821751	2822178	428	240	97	0.004166666666666667	-	UGAGUGUCUUGAAAGUUCUGUCUGGUC	38	6	231	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2830459-2830887	Cluster_6916	Pocillopora_meandrina_HIv1___Sc0000034	2830459	2830887	429	154	20	0.0	-	UGUUAACCAGUGUUUAGUUGGCAGUGUGG	61	1	153	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2836053-2836477	Cluster_6917	Pocillopora_meandrina_HIv1___Sc0000034	2836053	2836477	425	168	82	0.19047619047619047	-	UCUAUCGGGAAAUCUCAAUGCAUGGAGC	20	2	150	1	1	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2850194-2850828	Cluster_6918	Pocillopora_meandrina_HIv1___Sc0000034	2850194	2850828	635	645	308	0.9410852713178295	+	UAAUCAUUACAAAACUCUCUGACUCUGG	22	16	605	2	3	8	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2851262-2853851	Cluster_6919	Pocillopora_meandrina_HIv1___Sc0000034	2851262	2853851	2590	8353	2006	0.8673530468095295	+	UGAAUAAACGAGCCAAGGGAAAUCCUGA	391	122	7711	38	56	108	318	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2867937-2868716	Cluster_6920	Pocillopora_meandrina_HIv1___Sc0000034	2867937	2868716	780	276	124	0.6594202898550725	.	UACGUAAUCUAACCCUUGCAAUGACUUGC	29	9	203	0	3	26	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2904544-2905250	Cluster_6921	Pocillopora_meandrina_HIv1___Sc0000034	2904544	2905250	707	428	100	0.9953271028037384	+	UAGGACAACUGAGAAUCCACGUAGACUC	111	1	419	0	5	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2907196-2907622	Cluster_6922	Pocillopora_meandrina_HIv1___Sc0000034	2907196	2907622	427	157	72	0.8726114649681529	+	UGCUUGAAUUCUGCCGAACUGUACUGC	37	5	141	0	3	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2908286-2909080	Cluster_6923	Pocillopora_meandrina_HIv1___Sc0000034	2908286	2909080	795	2396	586	0.8681135225375626	+	UCCGUAUAUGAAUGUAUCGUCUGCAAU	251	166	2128	17	6	39	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2910217-2910645	Cluster_6924	Pocillopora_meandrina_HIv1___Sc0000034	2910217	2910645	429	209	108	0.8038277511961722	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	28	3	183	2	1	3	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2937158-2937903	Cluster_6925	Pocillopora_meandrina_HIv1___Sc0000034	2937158	2937903	746	835	355	0.026347305389221556	-	UAAGUAAGUAGACAUGGAUAGGCCUUGA	45	13	800	4	2	6	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2946021-2946447	Cluster_6926	Pocillopora_meandrina_HIv1___Sc0000034	2946021	2946447	427	97	11	0.9896907216494846	+	UAACCCGAGAACUGACACGUGAGUAGUC	60	0	88	0	0	0	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2950488-2950911	Cluster_6927	Pocillopora_meandrina_HIv1___Sc0000034	2950488	2950911	424	80	12	0.9875	+	UAACCCGAGAACUGACACGUGAGUAGUC	56	0	76	0	1	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2954955-2955382	Cluster_6928	Pocillopora_meandrina_HIv1___Sc0000034	2954955	2955382	428	113	20	0.9469026548672567	+	UAACCCGAGAACUGACACGUGAGUAGUC	75	0	97	0	1	1	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2959422-2959848	Cluster_6929	Pocillopora_meandrina_HIv1___Sc0000034	2959422	2959848	427	101	16	0.9900990099009901	+	UAACCCGAGAACUGACACGUGAGUAGUC	59	1	90	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2963889-2964316	Cluster_6930	Pocillopora_meandrina_HIv1___Sc0000034	2963889	2964316	428	104	15	0.9903846153846154	+	UAACCCGAGAACUGACACGUGAGUAGUC	65	2	91	2	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2976051-2976606	Cluster_6931	Pocillopora_meandrina_HIv1___Sc0000034	2976051	2976606	556	3413	492	0.9859361265748608	+	UGUACGUGCUCGUGAUCUCGUAAUGCUGAC	410	29	3326	7	7	13	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:2982324-2982752	Cluster_6932	Pocillopora_meandrina_HIv1___Sc0000034	2982324	2982752	429	249	126	0.7269076305220884	.	UACGCUUAAACUUUUCCUUGAUCAAUUUGA	17	10	204	2	8	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3000363-3000809	Cluster_6933	Pocillopora_meandrina_HIv1___Sc0000034	3000363	3000809	447	373	63	0.5603217158176944	.	GCACCAAUCAGAGCUGUUGAAAAACAACUA	117	3	368	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3068438-3068854	Cluster_6934	Pocillopora_meandrina_HIv1___Sc0000034	3068438	3068854	417	119	63	0.7983193277310925	.	UAACAUCGAACUGGACCUAAAUUUAAGC	11	24	77	13	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000034:3069261-3069686	Cluster_6935	Pocillopora_meandrina_HIv1___Sc0000034	3069261	3069686	426	131	49	0.9694656488549618	+	UUGACCGGGUGGAAAUAAGAGAGACAGC	19	8	111	1	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:64573-65002	Cluster_6936	Pocillopora_meandrina_HIv1___Sc0000035	64573	65002	430	491	131	0.19959266802443992	-	UAUGAUCCUUAAAGCAAAAAUGGCUGUCGA	183	4	471	2	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:67982-68407	Cluster_6937	Pocillopora_meandrina_HIv1___Sc0000035	67982	68407	426	135	52	0.2222222222222222	.	UCGAAGAUACAAACAUAUGAACCAGCA	14	0	130	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:148904-150034	Cluster_6938	Pocillopora_meandrina_HIv1___Sc0000035	148904	150034	1131	1152	394	0.8454861111111112	+	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	86	13	1096	3	4	9	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:214892-215320	Cluster_6939	Pocillopora_meandrina_HIv1___Sc0000035	214892	215320	429	149	35	1.0	+	AUUGCAAGCAAACGGCUCGGAGUCUUCUU	35	9	137	0	1	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:218978-219411	Cluster_6940	Pocillopora_meandrina_HIv1___Sc0000035	218978	219411	434	1029	163	0.9970845481049563	+	AUUGCAAACAAACGGCUACGAGUCUUCUUC	220	50	808	12	8	4	147	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:220024-220453	Cluster_6941	Pocillopora_meandrina_HIv1___Sc0000035	220024	220453	430	214	65	0.985981308411215	+	AUUGUAAGCCUUCUUCGUGCAAACCUGA	52	21	178	2	5	6	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:271304-271755	Cluster_6942	Pocillopora_meandrina_HIv1___Sc0000035	271304	271755	452	219	88	0.9771689497716894	+	UGAACACGCGUACUUGUAAUUAUGAAAGG	21	5	210	0	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:271912-272339	Cluster_6943	Pocillopora_meandrina_HIv1___Sc0000035	271912	272339	428	337	190	0.8397626112759644	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	22	2	298	1	6	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:272673-275080	Cluster_6944	Pocillopora_meandrina_HIv1___Sc0000035	272673	275080	2408	4212	1406	0.9275878442545109	+	UGUACAACCAUCCGAUACUCUUGU	658	39	2968	21	21	69	1094	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:275353-276534	Cluster_6945	Pocillopora_meandrina_HIv1___Sc0000035	275353	276534	1182	1662	712	0.7912154031287605	.	CUUUCCGAGGUCGCGA	109	207	1358	10	13	20	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:277449-278555	Cluster_6946	Pocillopora_meandrina_HIv1___Sc0000035	277449	278555	1107	1321	563	0.8667676003028009	+	UACAAUAACCUCUGAUUUCACUAAAUG	70	17	1204	7	13	28	52	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:282145-282573	Cluster_6947	Pocillopora_meandrina_HIv1___Sc0000035	282145	282573	429	316	57	0.9936708860759493	+	AUUGCAAGCGAACGGCUAGGAGUCUUCUU	112	19	286	2	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:307502-307929	Cluster_6948	Pocillopora_meandrina_HIv1___Sc0000035	307502	307929	428	295	123	0.8101694915254237	+	UUGGUUCUUGUAGUUGUACUGGUCGCA	17	19	258	0	1	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:307939-308348	Cluster_6949	Pocillopora_meandrina_HIv1___Sc0000035	307939	308348	410	104	40	0.6923076923076923	.	UGUUACAAAACCAUUAGAACUAUCAGUU	21	2	82	1	2	1	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:309344-309764	Cluster_6950	Pocillopora_meandrina_HIv1___Sc0000035	309344	309764	421	131	60	0.2595419847328244	.	UAUGCAUUCAAUGAUCGUGGUCGG	26	0	63	2	0	16	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:309813-310225	Cluster_6951	Pocillopora_meandrina_HIv1___Sc0000035	309813	310225	413	169	101	0.7869822485207101	.	UCCUGACAUGAUUCUUUGAGUUCUUUCAA	16	3	155	0	3	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:412063-412557	Cluster_6952	Pocillopora_meandrina_HIv1___Sc0000035	412063	412557	495	908	270	0.13876651982378854	-	AAUGGGAAAACGAGAACAGCGUGA	61	20	591	18	16	92	171	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:578022-578473	Cluster_6953	Pocillopora_meandrina_HIv1___Sc0000035	578022	578473	452	232	88	0.9655172413793104	+	UGAACACGCGUACUUGUAAUUAUGAAAUG	29	1	224	0	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:578632-579116	Cluster_6954	Pocillopora_meandrina_HIv1___Sc0000035	578632	579116	485	334	185	0.8532934131736527	+	UGAUUCCGCGCUUAUGACUCGUCCCAUC	22	1	300	4	3	7	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:579393-581800	Cluster_6955	Pocillopora_meandrina_HIv1___Sc0000035	579393	581800	2408	4191	1385	0.9200668098305893	+	UGUACAACCAUCCGAUACUCUUGU	645	36	2963	16	28	71	1077	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:581999-583254	Cluster_6956	Pocillopora_meandrina_HIv1___Sc0000035	581999	583254	1256	1577	645	0.8034242232086239	+	CUUUCCGAGGUCGCGA	92	185	1290	9	23	16	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:583270-583703	Cluster_6957	Pocillopora_meandrina_HIv1___Sc0000035	583270	583703	434	369	197	0.5013550135501355	.	UGCAAUGGUCUGCAGGUUCGUAGGAUGAUU	16	23	312	1	6	6	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:584166-585284	Cluster_6958	Pocillopora_meandrina_HIv1___Sc0000035	584166	585284	1119	3875	899	0.8838709677419355	+	UGCUAACACGGGACGAUUUGGAUGAAGCC	400	62	3598	15	44	47	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:593477-593906	Cluster_6959	Pocillopora_meandrina_HIv1___Sc0000035	593477	593906	430	1768	70	0.9994343891402715	+	AUUGCAAGCAAACGGCUAGGAGUCUUCUU	1147	0	1765	1	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:667123-667545	Cluster_6960	Pocillopora_meandrina_HIv1___Sc0000035	667123	667545	423	111	45	1.0	+	UAAGUUGAUCUCGGUUGUCGAAAGGCAGUA	18	0	111	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:672252-672704	Cluster_6961	Pocillopora_meandrina_HIv1___Sc0000035	672252	672704	453	234	99	0.021367521367521368	-	UGAACACGCGUACUUGUAAUUAUGAAAUG	25	2	224	0	2	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:677759-678185	Cluster_6962	Pocillopora_meandrina_HIv1___Sc0000035	677759	678185	427	180	74	0.21666666666666667	.	UGUACUGUUUGUAUUUUUUUUCCUGGG	47	3	167	1	5	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:757961-758385	Cluster_6963	Pocillopora_meandrina_HIv1___Sc0000035	757961	758385	425	112	34	0.0	-	UACUGGUGCGAUGCAACUCUCGAUA	36	1	97	9	5	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:763025-763445	Cluster_6964	Pocillopora_meandrina_HIv1___Sc0000035	763025	763445	421	134	54	1.0	+	UUCGAGCGUAAGCCCUUCUCCA	19	6	10	18	41	40	19	22	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:954470-955072	Cluster_6965	Pocillopora_meandrina_HIv1___Sc0000035	954470	955072	603	700	185	0.04428571428571428	-	UCUGUAAACUCCGUAUUUAAUAACAAUUAA	86	10	666	4	1	0	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:964606-965035	Cluster_6966	Pocillopora_meandrina_HIv1___Sc0000035	964606	965035	430	170	39	0.9882352941176471	+	UACUCUUCAAAAAAAUCUCUGGAACCAAGA	77	2	168	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:981170-981716	Cluster_6967	Pocillopora_meandrina_HIv1___Sc0000035	981170	981716	547	2620	158	0.9595419847328245	+	UGUUGUGUUUUUUGAUCGUGGGCAUCCAC	696	4	2610	3	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1000950-1001371	Cluster_6968	Pocillopora_meandrina_HIv1___Sc0000035	1000950	1001371	422	13551	42	0.9997786141244188	+	CGGCCUGAAAAAAAA	7852	13347	0	114	53	37	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1080556-1080981	Cluster_6969	Pocillopora_meandrina_HIv1___Sc0000035	1080556	1080981	426	105	33	0.0380952380952381	-	UAAUCGUUGGCUCUUUCUCGAGACGGG	25	2	101	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1143856-1144329	Cluster_6970	Pocillopora_meandrina_HIv1___Sc0000035	1143856	1144329	474	1646	262	1.0	+	AUGAAUGAUGAAUGUGAAU	230	912	599	46	18	35	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1144745-1145576	Cluster_6971	Pocillopora_meandrina_HIv1___Sc0000035	1144745	1145576	832	5021	636	0.9998008364867557	+	GAUUACAAAAUAUACCGGAAGUCUGAUA	876	981	2538	343	326	408	425	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1146812-1147303	Cluster_6972	Pocillopora_meandrina_HIv1___Sc0000035	1146812	1147303	492	745	220	0.9946308724832215	+	UGUGUCUUGGCUUUGAUUGGUGCCGUCA	190	230	363	68	32	19	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1472413-1473314	Cluster_6973	Pocillopora_meandrina_HIv1___Sc0000035	1472413	1473314	902	907	403	0.308710033076075	.	UCUUCUCCAAAGACGUCUGAAUAUUCACUC	47	7	816	10	6	21	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1473587-1474099	Cluster_6974	Pocillopora_meandrina_HIv1___Sc0000035	1473587	1474099	513	717	273	0.06276150627615062	-	UAAACGUACUGGUGGUUGUGUUCUAAACC	41	7	677	4	7	12	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1474134-1474899	Cluster_6975	Pocillopora_meandrina_HIv1___Sc0000035	1474134	1474899	766	357	195	0.15406162464985995	-	UAGGUAUACCGUGAUUGGAGAAAUGGCGU	19	14	312	2	8	4	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1475094-1475522	Cluster_6976	Pocillopora_meandrina_HIv1___Sc0000035	1475094	1475522	429	656	202	0.021341463414634148	-	UGUUGAUGUAACCGUGAUCUUUGAAGG	103	1	619	7	4	6	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1581039-1581465	Cluster_6977	Pocillopora_meandrina_HIv1___Sc0000035	1581039	1581465	427	183	53	0.273224043715847	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	34	1	146	1	5	1	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1582206-1582621	Cluster_6978	Pocillopora_meandrina_HIv1___Sc0000035	1582206	1582621	416	208	94	0.08173076923076923	-	UGAAAGAACUUUCAUGAUGCGUUUUACCU	19	4	192	1	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1582976-1583395	Cluster_6979	Pocillopora_meandrina_HIv1___Sc0000035	1582976	1583395	420	252	161	0.08333333333333333	-	UGUACGAGUCAGACACGUGGAUACUUGC	19	3	233	0	4	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1583500-1583905	Cluster_6980	Pocillopora_meandrina_HIv1___Sc0000035	1583500	1583905	406	175	111	0.15428571428571428	-	UUGGUAAAUUCUGAUCGAAGCCUUCUCACU	13	3	161	0	1	6	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:1989820-1989912	Cluster_6981	Pocillopora_meandrina_HIv1___Sc0000035	1989820	1989912	93	4578	220	1.0	+	UAUUUACAACUCUCAAAACAAC	1694	636	49	397	1977	1482	37	22	Y	NA
Pocillopora_meandrina_HIv1___Sc0000035:2054959-2055375	Cluster_6982	Pocillopora_meandrina_HIv1___Sc0000035	2054959	2055375	417	170	3	0.9941176470588236	+	AGUGUGCUCUUAACGGG	168	170	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2146801-2147217	Cluster_6983	Pocillopora_meandrina_HIv1___Sc0000035	2146801	2147217	417	181	3	0.988950276243094	+	AGUGUGCUCUUAACGGG	179	181	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2501614-2502039	Cluster_6984	Pocillopora_meandrina_HIv1___Sc0000035	2501614	2502039	426	140	50	0.08571428571428572	-	CUUCGUAGAAAUUACCGGACUGUAACAGG	20	46	77	3	11	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2621578-2621995	Cluster_6985	Pocillopora_meandrina_HIv1___Sc0000035	2621578	2621995	418	3411	40	1.0	+	CUUUCCGAGGUCGCA	2665	3411	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2674925-2675344	Cluster_6986	Pocillopora_meandrina_HIv1___Sc0000035	2674925	2675344	420	164	93	0.49390243902439024	.	ACUGGAUACAAAACUGCUCGAUGC	28	2	102	0	1	11	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2675729-2676156	Cluster_6987	Pocillopora_meandrina_HIv1___Sc0000035	2675729	2676156	428	227	96	0.022026431718061675	-	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	63	0	222	0	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2743900-2744864	Cluster_6988	Pocillopora_meandrina_HIv1___Sc0000035	2743900	2744864	965	2308	667	0.4055459272097054	.	UGUACCUUUGUCGAUUCUGAUCAUCGCA	131	24	2159	10	27	39	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000035:2746977-2747526	Cluster_6989	Pocillopora_meandrina_HIv1___Sc0000035	2746977	2747526	550	631	189	0.9144215530903328	+	UCCUUGUAUACUUUUGGGCCUUUCCAGA	72	6	608	2	1	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:84755-86650	Cluster_6990	Pocillopora_meandrina_HIv1___Sc0000036	84755	86650	1896	10683	2307	0.9626509407469812	+	CAGGUCUACUGCUUUACUUCUGAGAGUAA	745	151	9917	39	162	170	244	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:86685-87721	Cluster_6991	Pocillopora_meandrina_HIv1___Sc0000036	86685	87721	1037	2259	708	0.9557326250553342	+	UGCUUUAACUUUCUUUGGAUCAGGUCUAA	123	31	2124	13	30	22	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:87873-89407	Cluster_6992	Pocillopora_meandrina_HIv1___Sc0000036	87873	89407	1535	9154	2124	0.8754642779112957	+	UCUACGUCUUUCGCUUGUUUUUCACUGAGU	261	57	8583	35	43	172	264	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:651439-651920	Cluster_6993	Pocillopora_meandrina_HIv1___Sc0000036	651439	651920	482	685	279	0.08905109489051095	-	UAAUCUGAAGGUCGUGAGU	59	475	60	91	20	34	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:714466-714878	Cluster_6994	Pocillopora_meandrina_HIv1___Sc0000036	714466	714878	413	215	146	0.8930232558139535	+	UAAAUGACUCAGUCUACUAAAAUAGAACUA	10	64	117	7	8	9	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:801362-801777	Cluster_6995	Pocillopora_meandrina_HIv1___Sc0000036	801362	801777	416	1749	11	0.9994282447112636	+	GCGGAUGUGGCGGAA	1383	1748	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1027026-1027429	Cluster_6996	Pocillopora_meandrina_HIv1___Sc0000036	1027026	1027429	404	192	135	0.005208333333333333	-	GACGGGUUUUUAUGACGAACU	12	47	81	30	12	7	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1124854-1125270	Cluster_6997	Pocillopora_meandrina_HIv1___Sc0000036	1124854	1125270	417	3623	22	0.0002760143527463428	-	GCCGAUGUAGCUCAGUU	1888	3621	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1284759-1285299	Cluster_6998	Pocillopora_meandrina_HIv1___Sc0000036	1284759	1285299	541	1278	469	0.9968701095461658	+	CUGCACACUUUUUAAGACCUGUC	98	341	396	103	193	178	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1286770-1287191	Cluster_6999	Pocillopora_meandrina_HIv1___Sc0000036	1286770	1287191	422	157	81	0.9936305732484076	+	UAGCACGCUGUUUCAACCAUGAAAGAACA	30	27	95	4	7	14	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1292308-1292851	Cluster_7000	Pocillopora_meandrina_HIv1___Sc0000036	1292308	1292851	544	1858	481	0.9989235737351991	+	GUUUGACGACAAUAGACCUUGGUACACAA	277	311	1120	66	116	129	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1346400-1346823	Cluster_7001	Pocillopora_meandrina_HIv1___Sc0000036	1346400	1346823	424	159	72	1.0	+	AAGGCCAGAAAAUCUGAAGAGACU	18	37	47	11	12	14	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1389111-1389539	Cluster_7002	Pocillopora_meandrina_HIv1___Sc0000036	1389111	1389539	429	479	68	0.0	-	UCUGGAAGCGUUAUCUGCUGGUCUGCC	136	1	464	0	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1437982-1438412	Cluster_7003	Pocillopora_meandrina_HIv1___Sc0000036	1437982	1438412	431	768	174	0.0013020833333333333	-	UCUGGAAGCGUUAUCUGCCGGUCUGCCUG	154	68	671	7	7	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1504251-1504679	Cluster_7004	Pocillopora_meandrina_HIv1___Sc0000036	1504251	1504679	429	151	42	0.0	-	UCUGGAAGCAUUAUCUGCCGGUCUGCCUG	51	3	143	2	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1527809-1528277	Cluster_7005	Pocillopora_meandrina_HIv1___Sc0000036	1527809	1528277	469	1226	306	0.0024469820554649264	-	UGUGACUGAAAAGAUCUUGAAGGAACAUA	159	37	957	19	8	43	162	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1532703-1533139	Cluster_7006	Pocillopora_meandrina_HIv1___Sc0000036	1532703	1533139	437	303	126	0.0033003300330033004	-	GCAUUAUCUGCCGGUCUGCCUGUACUUGUC	27	23	253	8	5	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1557087-1557516	Cluster_7007	Pocillopora_meandrina_HIv1___Sc0000036	1557087	1557516	430	311	130	0.003215434083601286	-	CGUUAUCUGCUGGUCUGCCUGUACUUGUC	85	40	243	7	7	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1572102-1572553	Cluster_7008	Pocillopora_meandrina_HIv1___Sc0000036	1572102	1572553	452	455	84	0.0	-	UCUCGAAGCAUUGUCUGCUGGUCUGCC	66	12	436	0	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1597170-1597606	Cluster_7009	Pocillopora_meandrina_HIv1___Sc0000036	1597170	1597606	437	1290	282	0.0	-	UCUUGAAGCAUUAUCUGCUGGUCUGCCUG	298	276	949	21	14	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1601497-1601928	Cluster_7010	Pocillopora_meandrina_HIv1___Sc0000036	1601497	1601928	432	1079	123	0.9944392956441149	+	UGCAUCUUCAUCAUCGUUUGGACCAAGA	640	5	1066	1	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1615578-1616029	Cluster_7011	Pocillopora_meandrina_HIv1___Sc0000036	1615578	1616029	452	450	84	0.0	-	UCUCGAAGCAUUGUCUGCUGGUCUGCCUG	72	6	436	3	2	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1686687-1687189	Cluster_7012	Pocillopora_meandrina_HIv1___Sc0000036	1686687	1687189	503	419	157	0.7350835322195705	.	UCUGGCCACAAAUCGUGCAUUCUUGUUC	68	15	349	6	16	24	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:1793180-1793594	Cluster_7013	Pocillopora_meandrina_HIv1___Sc0000036	1793180	1793594	415	130	20	0.13076923076923078	-	CCGUGCUGUAGGCUU	65	128	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2160572-2160987	Cluster_7014	Pocillopora_meandrina_HIv1___Sc0000036	2160572	2160987	416	134	3	0.9850746268656716	+	UGAGGGGGGGUUCUCA	131	132	0	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2254785-2255201	Cluster_7015	Pocillopora_meandrina_HIv1___Sc0000036	2254785	2255201	417	519	15	0.9980732177263969	+	ACGGAGAAUUCUUUU	190	519	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2265598-2266027	Cluster_7016	Pocillopora_meandrina_HIv1___Sc0000036	2265598	2266027	430	150	50	0.9866666666666667	+	AAACGAUUGAAUAGCAUAACUGAUGAACUA	17	2	146	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2266558-2267225	Cluster_7017	Pocillopora_meandrina_HIv1___Sc0000036	2266558	2267225	668	949	378	0.7144362486828241	.	UGACUUUCGCUAUCUUCCAACAAUCAGGGA	41	15	842	14	7	17	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2281183-2281602	Cluster_7018	Pocillopora_meandrina_HIv1___Sc0000036	2281183	2281602	420	147	86	0.16326530612244897	-	CGUGUUUACAUGGCCUGAUG	19	73	12	19	34	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2400213-2400686	Cluster_7019	Pocillopora_meandrina_HIv1___Sc0000036	2400213	2400686	474	265213	750	0.0	-	GCACUGGUGGUUCAGUGGUAGAAUUCUCGCC	69889	556	264038	12	37	53	517	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2514437-2514851	Cluster_7020	Pocillopora_meandrina_HIv1___Sc0000036	2514437	2514851	415	171	48	0.011695906432748537	-	GAGUCGGCCGUGGAU	75	143	21	3	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2716860-2717282	Cluster_7021	Pocillopora_meandrina_HIv1___Sc0000036	2716860	2717282	423	153	30	0.9673202614379085	+	UUCGCGUCUGAAGCUGUUAGAGU	86	10	9	5	12	116	1	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2755154-2755583	Cluster_7022	Pocillopora_meandrina_HIv1___Sc0000036	2755154	2755583	430	192	34	1.0	+	UAAGACUGCAAAUGAAAAACGUCAAAUGGC	107	7	183	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2927793-2928327	Cluster_7023	Pocillopora_meandrina_HIv1___Sc0000036	2927793	2928327	535	3342	481	0.9946140035906643	+	AUAAUUAACAGUUGGCAGAUAUUG	602	433	791	74	220	787	1037	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2960173-2960604	Cluster_7024	Pocillopora_meandrina_HIv1___Sc0000036	2960173	2960604	432	312	109	0.9230769230769231	+	UACGUGUAGAAAGCCUUCUCUGACAUC	23	2	293	1	2	6	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2960824-2961337	Cluster_7025	Pocillopora_meandrina_HIv1___Sc0000036	2960824	2961337	514	200	92	0.98	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	33	1	191	1	0	0	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000036:2961682-2962468	Cluster_7026	Pocillopora_meandrina_HIv1___Sc0000036	2961682	2962468	787	3940	975	0.9317258883248731	+	UAACUUCCCAUUCCUGAACAGAUUCGUG	206	114	3636	27	25	50	88	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:4441-4869	Cluster_7027	Pocillopora_meandrina_HIv1___Sc0000037	4441	4869	429	388	42	0.015463917525773196	-	UUUUUCCUGUGAACUGAUAUCAACUUAG	226	12	373	3	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:6786-7213	Cluster_7028	Pocillopora_meandrina_HIv1___Sc0000037	6786	7213	428	147	42	0.8775510204081632	+	UGUGUACUUUUGGUAGGUGGUAAUCAAA	49	5	137	4	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:13248-13671	Cluster_7029	Pocillopora_meandrina_HIv1___Sc0000037	13248	13671	424	88	25	0.8977272727272727	+	UAUGAUUCGUCCCACUGCAGUAUUAAUC	48	0	83	0	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:99318-99732	Cluster_7030	Pocillopora_meandrina_HIv1___Sc0000037	99318	99732	415	85	13	0.9647058823529412	+	UGUGUGCUCUUAACUA	51	85	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:177212-177641	Cluster_7031	Pocillopora_meandrina_HIv1___Sc0000037	177212	177641	430	268	52	0.0	-	UGUGCUAGUCAAUGGGAACGUAAAUUUGAU	150	9	251	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:373185-373611	Cluster_7032	Pocillopora_meandrina_HIv1___Sc0000037	373185	373611	427	184	40	0.19021739130434784	-	UUGGUGCAUUUCGAUCCUUGCUGUUC	37	0	181	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:374251-374666	Cluster_7033	Pocillopora_meandrina_HIv1___Sc0000037	374251	374666	416	958	16	0.0	-	GAAUCGGCCGUGGCUU	795	958	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:657487-657913	Cluster_7034	Pocillopora_meandrina_HIv1___Sc0000037	657487	657913	427	178	71	0.12359550561797752	-	UGCUUUAACGAACUGAUGUGUUUCUUGA	46	1	172	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:695148-695558	Cluster_7035	Pocillopora_meandrina_HIv1___Sc0000037	695148	695558	411	185	156	0.010810810810810811	-	CUCGAUGGAAAUUCUUAAUGGC	3	49	74	15	20	12	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:705633-706036	Cluster_7036	Pocillopora_meandrina_HIv1___Sc0000037	705633	706036	404	154	129	0.01948051948051948	-	CUAGUAACUGAUGCUCGACUUCUUUGAAUUU	4	58	68	7	7	8	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1082536-1083482	Cluster_7037	Pocillopora_meandrina_HIv1___Sc0000037	1082536	1083482	947	2152	731	0.09433085501858736	-	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	168	18	2000	11	12	31	80	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1083489-1084357	Cluster_7038	Pocillopora_meandrina_HIv1___Sc0000037	1083489	1084357	869	525	268	0.07238095238095238	-	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	23	10	496	1	1	7	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1084558-1086553	Cluster_7039	Pocillopora_meandrina_HIv1___Sc0000037	1084558	1086553	1996	3379	1138	0.0529742527374963	-	UCCGAGACUGUAGAUCCGAGUUGAUCCA	197	30	3135	15	24	66	109	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1090517-1090944	Cluster_7040	Pocillopora_meandrina_HIv1___Sc0000037	1090517	1090944	428	399	51	0.9899749373433584	+	UGAAACUCUGAUCUGAAAAUAUUUGUC	203	1	395	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1092825-1093253	Cluster_7041	Pocillopora_meandrina_HIv1___Sc0000037	1092825	1093253	429	137	48	0.9854014598540146	+	AGUUGACAUAUGGACCGGUACAAACAAGGG	29	1	131	1	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1230351-1231032	Cluster_7042	Pocillopora_meandrina_HIv1___Sc0000037	1230351	1231032	682	658	199	0.993920972644377	+	UGAGAACUUCUGGUCGUGUUAAACUAAUA	109	11	636	1	2	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1231089-1231516	Cluster_7043	Pocillopora_meandrina_HIv1___Sc0000037	1231089	1231516	428	239	95	1.0	+	UUGGUCUUUAUCUUUUCAGGGUCUGGAA	38	8	227	0	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1306237-1306656	Cluster_7044	Pocillopora_meandrina_HIv1___Sc0000037	1306237	1306656	420	140	83	0.9357142857142857	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	16	0	132	1	1	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1307744-1308170	Cluster_7045	Pocillopora_meandrina_HIv1___Sc0000037	1307744	1308170	427	137	83	0.8686131386861314	+	UGUAUUGAUUGAACUUGUCGGUUGACCA	15	2	123	0	0	9	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1309506-1309914	Cluster_7046	Pocillopora_meandrina_HIv1___Sc0000037	1309506	1309914	409	132	72	0.8787878787878788	+	UGCUUGUGACUUAAGUUGUCGUUCUUCUUC	10	3	120	0	1	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1368155-1368570	Cluster_7047	Pocillopora_meandrina_HIv1___Sc0000037	1368155	1368570	416	145	10	0.006896551724137931	-	GCCGGGAUAGCUCAGC	97	145	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1803344-1803763	Cluster_7048	Pocillopora_meandrina_HIv1___Sc0000037	1803344	1803763	420	3892	147	0.9979445015416238	+	AUGUCUGUCUGAGUGUCUAC	598	3882	1	8	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1935822-1936248	Cluster_7049	Pocillopora_meandrina_HIv1___Sc0000037	1935822	1936248	427	404	135	0.9356435643564357	+	UAAGAUUUACACACUGAUCGACCAUGU	148	7	380	0	4	6	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1936420-1937055	Cluster_7050	Pocillopora_meandrina_HIv1___Sc0000037	1936420	1937055	636	503	220	0.679920477137177	.	AAGUUUGUGAGCCCUGACAAUCCGGAAGA	31	8	412	3	10	12	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1937377-1938367	Cluster_7051	Pocillopora_meandrina_HIv1___Sc0000037	1937377	1938367	991	3542	648	0.963579898362507	+	UCGGAUGUACUCUUCUGCCCCAUGUGGAUG	344	33	3359	23	22	37	68	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1938903-1940793	Cluster_7052	Pocillopora_meandrina_HIv1___Sc0000037	1938903	1940793	1891	2303	959	0.9426834563612679	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	88	33	2151	4	18	36	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:1973739-1974153	Cluster_7053	Pocillopora_meandrina_HIv1___Sc0000037	1973739	1974153	415	120	8	0.0	-	UGGGUUCUGUUGGAA	91	120	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2093152-2093574	Cluster_7054	Pocillopora_meandrina_HIv1___Sc0000037	2093152	2093574	423	116	19	0.9913793103448276	+	UGACGUUCAAACUUUUCUAGAAGGGAAA	23	21	67	16	4	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2142047-2142474	Cluster_7055	Pocillopora_meandrina_HIv1___Sc0000037	2142047	2142474	428	86	33	0.03488372093023256	-	UUAUUUGCACUAUUGUGGAAAAUUCCUGU	17	0	84	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2190695-2191108	Cluster_7056	Pocillopora_meandrina_HIv1___Sc0000037	2190695	2191108	414	86	23	0.9767441860465116	+	AAAAGACAUGAGAGA	22	84	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2252197-2254837	Cluster_7057	Pocillopora_meandrina_HIv1___Sc0000037	2252197	2254837	2641	9638	2050	0.9938783980078855	+	UCUUCGUACUGUUUCCAAACGUUCUUUGGGG	1279	74	9366	15	31	37	115	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2270053-2270481	Cluster_7058	Pocillopora_meandrina_HIv1___Sc0000037	2270053	2270481	429	177	31	1.0	+	UGUAAAUCUUGUCUGGAUCUGGGUCAACA	79	4	171	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2277242-2277671	Cluster_7059	Pocillopora_meandrina_HIv1___Sc0000037	2277242	2277671	430	220	107	0.8681818181818182	+	UCAGUGACUUUUGAGACUAUUGGUAAUAAU	20	2	210	1	2	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2277916-2278418	Cluster_7060	Pocillopora_meandrina_HIv1___Sc0000037	2277916	2278418	503	398	138	0.9723618090452262	+	UAGUUGACGAAUUUCUGGUGUUAUAAACGG	39	5	383	0	1	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2280209-2281532	Cluster_7061	Pocillopora_meandrina_HIv1___Sc0000037	2280209	2281532	1324	2100	602	0.9038095238095238	+	UCUUCCAUUUUAUGACUCAAAGCCUCUGGGA	64	23	1918	9	43	34	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2281809-2282636	Cluster_7062	Pocillopora_meandrina_HIv1___Sc0000037	2281809	2282636	828	711	242	0.8368495077355836	+	UGUGUGACUUAAGCUUCUAGCUGCAAACAGC	84	5	656	5	9	5	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2282728-2283298	Cluster_7063	Pocillopora_meandrina_HIv1___Sc0000037	2282728	2283298	571	1223	371	0.8168438266557645	+	UCAAACCUCUCUUGGAUGAAUUUCAUGG	80	13	1112	19	25	18	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2342605-2343031	Cluster_7064	Pocillopora_meandrina_HIv1___Sc0000037	2342605	2343031	427	172	79	0.040697674418604654	-	UGUUUCGCUUAGAAUUGUUGCAGUUGGC	16	7	161	1	0	3	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2417449-2417876	Cluster_7065	Pocillopora_meandrina_HIv1___Sc0000037	2417449	2417876	428	119	32	1.0	+	AAUCUAACCAACAGAAAAAUUCUGCAAUCCU	26	7	112	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2424920-2425366	Cluster_7066	Pocillopora_meandrina_HIv1___Sc0000037	2424920	2425366	447	420	174	0.9571428571428572	+	UUGGACGUCGUGCAAAAUAUAUUCUUUGAA	20	6	398	3	2	5	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2425383-2425999	Cluster_7067	Pocillopora_meandrina_HIv1___Sc0000037	2425383	2425999	617	480	197	0.9645833333333333	+	UGAACACGUGGAUGAUGGAACAGUUCAUGG	27	7	457	2	2	2	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2431072-2431714	Cluster_7068	Pocillopora_meandrina_HIv1___Sc0000037	2431072	2431714	643	564	201	1.0	+	UCGGUCUUUAUCUGCACGUAUUCGUAUGUU	55	10	552	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2432048-2432468	Cluster_7069	Pocillopora_meandrina_HIv1___Sc0000037	2432048	2432468	421	421	54	0.995249406175772	+	AAAGAAGUACAAGUGGUAGAA	103	182	26	211	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2449003-2449425	Cluster_7070	Pocillopora_meandrina_HIv1___Sc0000037	2449003	2449425	423	82	27	1.0	+	UGUGACUUACAUCUGAUCUUGGCUCCA	19	3	77	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2451524-2451937	Cluster_7071	Pocillopora_meandrina_HIv1___Sc0000037	2451524	2451937	414	161	91	1.0	+	UCCGAGGACAGCCUGCA	38	61	90	0	8	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2464093-2464523	Cluster_7072	Pocillopora_meandrina_HIv1___Sc0000037	2464093	2464523	431	182	42	0.989010989010989	+	UAAUGCUGCUGAAUUCUUCCUCCAACAGGA	52	3	179	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2473274-2473815	Cluster_7073	Pocillopora_meandrina_HIv1___Sc0000037	2473274	2473815	542	586	159	0.810580204778157	+	UGUGAAAGCGGAAUCGUUUUGCUAUGAGC	100	15	549	1	1	4	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2592424-2592899	Cluster_7074	Pocillopora_meandrina_HIv1___Sc0000037	2592424	2592899	476	3983	291	0.9994978659302034	+	CUGCAGUGAUGAGAACACUUUACCAUAGAUU	1764	451	3372	23	27	41	69	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2680229-2680657	Cluster_7075	Pocillopora_meandrina_HIv1___Sc0000037	2680229	2680657	429	117	20	1.0	+	AACUGAAGAAUCAAUCUCUGAAACCGAUA	65	2	114	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2733621-2734030	Cluster_7076	Pocillopora_meandrina_HIv1___Sc0000037	2733621	2734030	410	85	46	0.38823529411764707	.	CACACGAAUACGAGUAGACUUGAGG	8	8	68	1	0	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2763358-2763772	Cluster_7077	Pocillopora_meandrina_HIv1___Sc0000037	2763358	2763772	415	129	4	1.0	+	CGGCUUGAAAAAAAA	124	129	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000037:2790804-2791229	Cluster_7078	Pocillopora_meandrina_HIv1___Sc0000037	2790804	2791229	426	156	44	1.0	+	AGUGUGUCGGUUCUGAGCUAGCUUCU	24	3	144	0	0	1	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:60657-61177	Cluster_7079	Pocillopora_meandrina_HIv1___Sc0000038	60657	61177	521	1918	501	0.9963503649635036	+	GUCAGGAUGGCCGAGC	223	1565	167	98	27	32	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:211854-212281	Cluster_7080	Pocillopora_meandrina_HIv1___Sc0000038	211854	212281	428	299	136	0.6822742474916388	.	UAGGGCUAACGAACACUGGUUGGACAGU	49	16	254	9	3	8	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:212683-213109	Cluster_7081	Pocillopora_meandrina_HIv1___Sc0000038	212683	213109	427	208	84	0.10096153846153846	-	UAGAAUGAACGGCUUAAACAAACACCUU	17	10	192	2	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:246164-246579	Cluster_7082	Pocillopora_meandrina_HIv1___Sc0000038	246164	246579	416	196	142	0.9846938775510204	+	AAAGCUAGGACCUGAUGUAAGUCA	6	63	81	13	10	13	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:287118-287545	Cluster_7083	Pocillopora_meandrina_HIv1___Sc0000038	287118	287545	428	162	53	0.2839506172839506	.	UCCGAGUGCUGCACCUUCUUUCAUGGGAA	56	8	142	6	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:404907-405323	Cluster_7084	Pocillopora_meandrina_HIv1___Sc0000038	404907	405323	417	199	25	0.020100502512562814	-	UGCUCUGAAUGUCAAAG	78	194	1	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:431876-432290	Cluster_7085	Pocillopora_meandrina_HIv1___Sc0000038	431876	432290	415	79	6	1.0	+	UCUGUAUUACAAUGAUC	66	79	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:502976-503393	Cluster_7086	Pocillopora_meandrina_HIv1___Sc0000038	502976	503393	418	217	30	0.9493087557603687	+	CUUUCCGAGGUCGCGUUU	67	209	2	2	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:504778-505192	Cluster_7087	Pocillopora_meandrina_HIv1___Sc0000038	504778	505192	415	89	15	0.0	-	UUCCGAGGACUUGAC	37	80	6	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:570317-570732	Cluster_7088	Pocillopora_meandrina_HIv1___Sc0000038	570317	570732	416	110	8	0.00909090909090909	-	ACCGUGGUGGACUGCC	53	110	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:628652-629098	Cluster_7089	Pocillopora_meandrina_HIv1___Sc0000038	628652	629098	447	508	176	0.5059055118110236	.	CGAUAGCACAAAAAAACUCCAGGA	95	35	293	7	11	40	122	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:629192-629732	Cluster_7090	Pocillopora_meandrina_HIv1___Sc0000038	629192	629732	541	645	228	0.8542635658914729	+	UACAUCCUGUAUAGAAUUCUUUAAUGAC	43	19	570	5	7	17	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:630886-631495	Cluster_7091	Pocillopora_meandrina_HIv1___Sc0000038	630886	631495	610	853	251	0.9109026963657679	+	UGGACCUUCAGAAUUUUCAGCAUUCUUA	176	25	784	4	8	11	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:631535-631961	Cluster_7092	Pocillopora_meandrina_HIv1___Sc0000038	631535	631961	427	424	71	0.9599056603773585	+	UGGGUACAGACGGUAGGUUGAUGAUCU	131	17	397	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:632219-632644	Cluster_7093	Pocillopora_meandrina_HIv1___Sc0000038	632219	632644	426	160	66	0.9375	+	AAACAACAGAAUGUUCGGACGGCUCGACG	26	9	143	4	1	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:763722-764133	Cluster_7094	Pocillopora_meandrina_HIv1___Sc0000038	763722	764133	412	76	19	0.9736842105263158	+	GCGUGUUGUAGGCUU	30	74	0	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1115161-1115577	Cluster_7095	Pocillopora_meandrina_HIv1___Sc0000038	1115161	1115577	417	362	11	0.0027624309392265192	-	GAGAUUGCUGUAGGCUU	183	361	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1141843-1142272	Cluster_7096	Pocillopora_meandrina_HIv1___Sc0000038	1141843	1142272	430	140	51	0.03571428571428571	-	UGUUUACUUUCUUUACAACUUCGGAUACGGG	31	0	135	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1216888-1217362	Cluster_7097	Pocillopora_meandrina_HIv1___Sc0000038	1216888	1217362	475	977	156	0.015353121801432957	-	GCCUCUUUAGCUCAGU	341	896	39	23	14	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1251510-1252231	Cluster_7098	Pocillopora_meandrina_HIv1___Sc0000038	1251510	1252231	722	316	143	0.06329113924050633	-	UGAUAUCUAUGCUAUUAUUCUGUUUCCGAC	47	69	233	5	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1252309-1253285	Cluster_7099	Pocillopora_meandrina_HIv1___Sc0000038	1252309	1253285	977	1044	386	0.08141762452107279	-	UUUACCUAGAGUCUCUAAUGAUUGAACAUU	95	18	987	6	5	11	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1257056-1257484	Cluster_7100	Pocillopora_meandrina_HIv1___Sc0000038	1257056	1257484	429	339	138	0.029498525073746312	-	UGCGACACAAAUGGCUCUUGCACAACACA	62	3	329	1	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1257985-1258448	Cluster_7101	Pocillopora_meandrina_HIv1___Sc0000038	1257985	1258448	464	208	80	0.004807692307692308	-	UACAUGUCUUCACUGUUGAGCUGGGUGA	36	4	199	0	1	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1259179-1259624	Cluster_7102	Pocillopora_meandrina_HIv1___Sc0000038	1259179	1259624	446	250	108	0.06	-	UGAUGGGCCGUCUGGUACGCAAACGUUC	40	20	214	4	2	7	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1263833-1264863	Cluster_7103	Pocillopora_meandrina_HIv1___Sc0000038	1263833	1264863	1031	1519	385	0.23173140223831468	.	CUUUCCGAGGACGCGGUC	143	397	1087	3	5	9	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1269354-1269792	Cluster_7104	Pocillopora_meandrina_HIv1___Sc0000038	1269354	1269792	439	373	176	0.002680965147453083	-	UUGGAGAACGACGCCCGUAGAUGUGGGU	36	5	343	1	1	4	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1270502-1270931	Cluster_7105	Pocillopora_meandrina_HIv1___Sc0000038	1270502	1270931	430	116	39	0.008620689655172414	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	29	0	115	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1271207-1272056	Cluster_7106	Pocillopora_meandrina_HIv1___Sc0000038	1271207	1272056	850	1614	410	0.6047087980173482	.	UGCUGUUUUCCGACUGACACAACAUGUGUU	180	19	1552	12	3	9	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1272757-1273178	Cluster_7107	Pocillopora_meandrina_HIv1___Sc0000038	1272757	1273178	422	225	102	0.7955555555555556	.	UUCCAAUGCAACUGUGGAUCUGCUGAAGC	32	7	166	3	21	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1274815-1275420	Cluster_7108	Pocillopora_meandrina_HIv1___Sc0000038	1274815	1275420	606	376	147	0.007978723404255319	-	UGAAACUCUUACCUCGCUAACGCAUUUGUA	85	4	362	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1277615-1278355	Cluster_7109	Pocillopora_meandrina_HIv1___Sc0000038	1277615	1278355	741	606	284	0.0016501650165016502	-	UGUUGUGGCUCAAGAUCUCAAGUGAACAC	29	15	544	5	12	7	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1278891-1281934	Cluster_7110	Pocillopora_meandrina_HIv1___Sc0000038	1278891	1281934	3044	40018	3531	0.003723324503973212	-	UGGUUUCAAGACUUCAAGAAAGAUUUCAGG	6813	344	39028	107	136	179	224	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1282338-1285454	Cluster_7111	Pocillopora_meandrina_HIv1___Sc0000038	1282338	1285454	3117	45254	3822	0.0018119945198214523	-	UUUCUACCUUAAACUUCUGACUCUUAUGGU	7345	2148	41943	137	184	435	407	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1285568-1286853	Cluster_7112	Pocillopora_meandrina_HIv1___Sc0000038	1285568	1286853	1286	4710	1250	0.0006369426751592356	-	UGCCAAAAGACUGUUGUGGCUCAAGGUCAC	272	177	4378	26	45	48	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1287164-1289504	Cluster_7113	Pocillopora_meandrina_HIv1___Sc0000038	1287164	1289504	2341	35365	2725	0.0001979358122437438	-	UGUUUACGGGUGAUUGAAUGAGAACUGGU	5391	239	34400	56	35	85	550	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1289842-1292288	Cluster_7114	Pocillopora_meandrina_HIv1___Sc0000038	1289842	1292288	2447	365192	2635	0.00013965256632127756	-	UUCCUGCACGGCUUCAGGCAAUUCUGGC	154209	578	362643	94	172	252	1453	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1296788-1297217	Cluster_7115	Pocillopora_meandrina_HIv1___Sc0000038	1296788	1297217	430	383	147	0.04177545691906005	-	UGACGCUAUCGGUUUUAAGUUUUUGAACA	21	16	353	3	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1353302-1353736	Cluster_7116	Pocillopora_meandrina_HIv1___Sc0000038	1353302	1353736	435	1379	113	0.01305293691080493	-	UCCGCCAUGUGCCUCCA	710	1293	22	36	13	3	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1355889-1356305	Cluster_7117	Pocillopora_meandrina_HIv1___Sc0000038	1355889	1356305	417	564	37	0.01950354609929078	-	CGGCAUGCAAAAAAA	272	556	8	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1390108-1390737	Cluster_7118	Pocillopora_meandrina_HIv1___Sc0000038	1390108	1390737	630	12672	593	0.915719696969697	+	UGUGCUGGAAUUAACUGAGUUGGAGGAAC	2250	1230	8128	327	1021	1594	372	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1553779-1554205	Cluster_7119	Pocillopora_meandrina_HIv1___Sc0000038	1553779	1554205	427	168	75	0.27976190476190477	.	UCCUUCGUCUAAUAUCAUGUGUAAAAUGUU	26	17	135	2	2	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1718392-1718867	Cluster_7120	Pocillopora_meandrina_HIv1___Sc0000038	1718392	1718867	476	667	440	0.9985007496251874	+	AACGGAGAAGACGGAAA	11	256	222	65	47	30	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1719656-1720082	Cluster_7121	Pocillopora_meandrina_HIv1___Sc0000038	1719656	1720082	427	299	241	0.9933110367892977	+	GAAGACAUGACUGAUGA	5	123	107	13	20	21	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1720833-1721299	Cluster_7122	Pocillopora_meandrina_HIv1___Sc0000038	1720833	1721299	467	422	285	1.0	+	GAUGGAUUUGAAGUCUCAGUUUG	9	124	178	38	20	36	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1721510-1721926	Cluster_7123	Pocillopora_meandrina_HIv1___Sc0000038	1721510	1721926	417	224	169	0.9910714285714286	+	GUAACUGAGAUGAAUGGAAGGAUU	6	67	74	22	16	17	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1722271-1722757	Cluster_7124	Pocillopora_meandrina_HIv1___Sc0000038	1722271	1722757	487	715	374	1.0	+	ACUGCCCAGCGGUUUAUUGUUACA	18	148	333	56	46	62	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1723449-1723852	Cluster_7125	Pocillopora_meandrina_HIv1___Sc0000038	1723449	1723852	404	256	177	0.95703125	+	GCAGACUGCAGGGGCU	7	148	51	14	14	15	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1724166-1724826	Cluster_7126	Pocillopora_meandrina_HIv1___Sc0000038	1724166	1724826	661	693	464	0.9913419913419913	+	UUGUGUCUGUCCCUCAAGGUU	10	204	215	90	62	61	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1849730-1850461	Cluster_7127	Pocillopora_meandrina_HIv1___Sc0000038	1849730	1850461	732	390	167	0.03076923076923077	-	UGAAUGCGUAACAUAACUCCGAUCGAGU	25	7	375	1	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1851234-1851661	Cluster_7128	Pocillopora_meandrina_HIv1___Sc0000038	1851234	1851661	428	207	111	0.0821256038647343	-	UGAUAGGAGCGACUCUCGAUUUUGA	14	6	193	3	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1851687-1852659	Cluster_7129	Pocillopora_meandrina_HIv1___Sc0000038	1851687	1852659	973	707	347	0.05091937765205092	-	UCGAAUCGUCGGCAGACAACGCAGUGUCGA	43	5	668	10	7	10	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:1913941-1914916	Cluster_7130	Pocillopora_meandrina_HIv1___Sc0000038	1913941	1914916	976	9269	880	0.9348365519473514	+	UGAAUGCUGGUAUCUUGAUAGUAGAAC	2789	118	8135	65	737	128	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2000336-2000758	Cluster_7131	Pocillopora_meandrina_HIv1___Sc0000038	2000336	2000758	423	94	46	0.6170212765957447	.	UUGUACCGGUCCAUAUGUCAACUGUUG	12	1	85	0	2	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2024443-2025067	Cluster_7132	Pocillopora_meandrina_HIv1___Sc0000038	2024443	2025067	625	384	152	0.4114583333333333	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	66	10	304	2	8	16	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2025163-2025948	Cluster_7133	Pocillopora_meandrina_HIv1___Sc0000038	2025163	2025948	786	1066	194	0.014071294559099437	-	UAGGAGCUGAAUAACUCAGAAUUGAGC	161	0	1035	1	2	4	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2048099-2048527	Cluster_7134	Pocillopora_meandrina_HIv1___Sc0000038	2048099	2048527	429	96	15	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	68	0	95	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2053370-2053797	Cluster_7135	Pocillopora_meandrina_HIv1___Sc0000038	2053370	2053797	428	347	148	0.4034582132564842	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	54	6	277	4	4	15	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2054250-2054677	Cluster_7136	Pocillopora_meandrina_HIv1___Sc0000038	2054250	2054677	428	142	17	0.04225352112676056	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGU	51	1	137	1	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2129097-2129794	Cluster_7137	Pocillopora_meandrina_HIv1___Sc0000038	2129097	2129794	698	470	186	0.37872340425531914	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	60	8	376	6	3	27	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2129978-2130405	Cluster_7138	Pocillopora_meandrina_HIv1___Sc0000038	2129978	2130405	428	142	14	0.007042253521126761	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	64	0	142	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2153366-2153794	Cluster_7139	Pocillopora_meandrina_HIv1___Sc0000038	2153366	2153794	429	119	20	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	79	0	117	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2158406-2158833	Cluster_7140	Pocillopora_meandrina_HIv1___Sc0000038	2158406	2158833	428	349	134	0.3524355300859599	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	65	5	281	3	5	14	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2159285-2159713	Cluster_7141	Pocillopora_meandrina_HIv1___Sc0000038	2159285	2159713	429	151	19	0.046357615894039736	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	71	2	144	0	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2184108-2184535	Cluster_7142	Pocillopora_meandrina_HIv1___Sc0000038	2184108	2184535	428	220	101	0.9545454545454546	+	UGAUUAAGAACGAUAAACUGGAACGUGU	27	2	209	0	0	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2184778-2186379	Cluster_7143	Pocillopora_meandrina_HIv1___Sc0000038	2184778	2186379	1602	2152	736	0.787639405204461	.	UGAGUCUUGGAUUGAAGUACGACAUCACGUG	61	17	1929	9	12	50	135	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2277716-2278610	Cluster_7144	Pocillopora_meandrina_HIv1___Sc0000038	2277716	2278610	895	1636	620	0.5941320293398533	.	AUUUAUAUCAAGGAAGGCGGUGUU	88	104	1087	18	36	109	282	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2303627-2304055	Cluster_7145	Pocillopora_meandrina_HIv1___Sc0000038	2303627	2304055	429	107	24	1.0	+	UUGUAGACAAUCUUCACGGCCAACAGGGA	70	0	105	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2308701-2309325	Cluster_7146	Pocillopora_meandrina_HIv1___Sc0000038	2308701	2309325	625	402	166	0.3781094527363184	.	UGUGUCAUCUUCGAAGCUUGUACUUGG	65	14	315	2	6	16	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2309778-2310205	Cluster_7147	Pocillopora_meandrina_HIv1___Sc0000038	2309778	2310205	428	138	17	0.021739130434782608	-	UGAAAUCCUUUGUCGGCCAUAAUAGUGUC	58	0	138	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2329849-2330261	Cluster_7148	Pocillopora_meandrina_HIv1___Sc0000038	2329849	2330261	413	123	75	0.975609756097561	+	UGAGUAAAGAUUGUUAGAAACUGUUUCA	9	4	110	0	3	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2330327-2331372	Cluster_7149	Pocillopora_meandrina_HIv1___Sc0000038	2330327	2331372	1046	2830	1035	0.7879858657243817	.	UCCUCGUACACAUCUUUCUAAAAGUUUA	132	103	2288	107	66	171	95	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2331388-2332875	Cluster_7150	Pocillopora_meandrina_HIv1___Sc0000038	2331388	2332875	1488	4039	1319	0.8962614508541719	+	UAGCGGUAUUUUCUUCAAUAGUAAGGU	157	70	3563	35	31	171	169	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2335417-2337240	Cluster_7151	Pocillopora_meandrina_HIv1___Sc0000038	2335417	2337240	1824	32832	3517	0.9286671539961013	+	UGAUAUCUCUUGAUCUUUGACGUGUACCA	2195	491	30607	103	196	489	946	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2344734-2345161	Cluster_7152	Pocillopora_meandrina_HIv1___Sc0000038	2344734	2345161	428	173	95	0.9190751445086706	+	UGACGUCACGAUCUUUGCGCGCUACCAUU	20	6	159	0	1	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2352207-2352634	Cluster_7153	Pocillopora_meandrina_HIv1___Sc0000038	2352207	2352634	428	126	43	0.8333333333333334	+	ACGACUAUUACGGUCAGCUGAUUACUGGA	26	0	117	0	0	8	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2549411-2549838	Cluster_7154	Pocillopora_meandrina_HIv1___Sc0000038	2549411	2549838	428	714	89	0.09103641456582633	-	UUUCAAACUAAGGAAGGAGAAAGGGAUA	307	4	615	10	7	6	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2662667-2663081	Cluster_7155	Pocillopora_meandrina_HIv1___Sc0000038	2662667	2663081	415	104	16	0.8557692307692307	+	CGACCGUGGUGGACA	88	94	5	2	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2694496-2695197	Cluster_7156	Pocillopora_meandrina_HIv1___Sc0000038	2694496	2695197	702	237	121	0.919831223628692	+	UGUACUUUGUCUUUGUUGAAUUUGAUU	25	1	228	1	1	1	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000038:2696427-2696855	Cluster_7157	Pocillopora_meandrina_HIv1___Sc0000038	2696427	2696855	429	260	143	0.8769230769230769	+	UAAUGUGUCACGCAUGAGUUCGUCAUGUA	30	2	239	1	2	0	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:44069-44495	Cluster_7158	Pocillopora_meandrina_HIv1___Sc0000039	44069	44495	427	89	24	0.0	-	GACUGAAGCACGAGCAUCAUUCACUGUGGC	32	8	80	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:58776-59316	Cluster_7159	Pocillopora_meandrina_HIv1___Sc0000039	58776	59316	541	3792	659	0.0	-	CAGUCCAUAUCUAGUACCUAUA	602	482	2129	284	705	66	126	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:70259-70675	Cluster_7160	Pocillopora_meandrina_HIv1___Sc0000039	70259	70675	417	382	22	0.9973821989528796	+	GAGUGUGCUCUUAACAA	143	381	0	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:85340-85766	Cluster_7161	Pocillopora_meandrina_HIv1___Sc0000039	85340	85766	427	98	30	1.0	+	GCGACACUUUGAUCCUUGAUGAUCUGG	35	1	95	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:324852-325278	Cluster_7162	Pocillopora_meandrina_HIv1___Sc0000039	324852	325278	427	164	58	0.06707317073170732	-	UGGGUACAGACGGUAGGUUGAUGAUCU	28	5	151	4	0	0	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:326234-326787	Cluster_7163	Pocillopora_meandrina_HIv1___Sc0000039	326234	326787	554	316	103	0.11075949367088607	-	UGAGAUAGUUCUUCUGAUGUUUAUGAU	30	16	282	1	3	7	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:478396-478869	Cluster_7164	Pocillopora_meandrina_HIv1___Sc0000039	478396	478869	474	1289	210	0.21024049650892165	.	UUGUAACAACUUCCACUUGUGUGUCUGUG	213	24	1080	5	15	109	56	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:478925-479395	Cluster_7165	Pocillopora_meandrina_HIv1___Sc0000039	478925	479395	471	718	186	0.06824512534818941	-	UGAGAUAGUUCUUCUGAUGUUUAUGAUA	107	5	682	8	3	5	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:557505-557921	Cluster_7166	Pocillopora_meandrina_HIv1___Sc0000039	557505	557921	417	727	13	0.001375515818431912	-	UGAGACUUGAAGCGGUA	359	726	0	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:561570-562242	Cluster_7167	Pocillopora_meandrina_HIv1___Sc0000039	561570	562242	673	401	229	0.8902743142144638	+	UCUCGAGCGUUUCUAUUGUAGUAAAA	23	11	340	1	14	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:562255-563012	Cluster_7168	Pocillopora_meandrina_HIv1___Sc0000039	562255	563012	758	78233	2562	0.006902458042002736	-	UGAUGAACUAUCUGGUGAAUCUUCUGGU	19406	779	76106	153	284	269	642	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:563165-563756	Cluster_7169	Pocillopora_meandrina_HIv1___Sc0000039	563165	563756	592	7715	739	0.018276085547634477	-	UAAAACGAAGAUUGUCUGCACAAAUUUGC	2017	52	7034	27	108	328	166	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:564553-564984	Cluster_7170	Pocillopora_meandrina_HIv1___Sc0000039	564553	564984	432	472	193	0.9427966101694916	+	UAAUUCCAUCUUGCGCUGAUAGCUCGU	45	5	451	1	0	8	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565112-565526	Cluster_7171	Pocillopora_meandrina_HIv1___Sc0000039	565112	565526	415	340	172	0.9058823529411765	+	UGAACUUCUCGGCUCCAAACACUAUGG	25	6	311	1	4	10	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565545-565971	Cluster_7172	Pocillopora_meandrina_HIv1___Sc0000039	565545	565971	427	342	163	0.8976608187134503	+	UUGUCGUGAUCUUUCACUGCUUCUUGC	54	3	325	1	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:565992-567972	Cluster_7173	Pocillopora_meandrina_HIv1___Sc0000039	565992	567972	1981	7699	1792	0.9334978568645279	+	UAAACACACGAUUUCUAGGUAACGAACAG	1010	329	7022	59	46	97	146	N	N	hsa-miR-4286;bta-miR-4286
Pocillopora_meandrina_HIv1___Sc0000039:1069752-1070669	Cluster_7174	Pocillopora_meandrina_HIv1___Sc0000039	1069752	1070669	918	5789	855	0.02003800310934531	-	UACGAGCGAUAGAUCUUAAGCAUGUGCUGC	864	23	5200	95	24	36	411	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1070688-1071849	Cluster_7175	Pocillopora_meandrina_HIv1___Sc0000039	1070688	1071849	1162	3803	804	0.02235077570339206	-	UGUGAUAUUCCGAACACUUGAAUGAGUCA	214	23	3573	18	14	50	125	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1079123-1079539	Cluster_7176	Pocillopora_meandrina_HIv1___Sc0000039	1079123	1079539	417	141	76	0.2765957446808511	.	UGACUUGGAUUUGAAUUCU	13	50	67	13	9	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1084366-1084785	Cluster_7177	Pocillopora_meandrina_HIv1___Sc0000039	1084366	1084785	420	154	88	0.474025974025974	.	UUGGAACGUAUUCAAGAAAGGGC	23	5	90	0	1	37	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1115575-1116073	Cluster_7178	Pocillopora_meandrina_HIv1___Sc0000039	1115575	1116073	499	231	111	0.935064935064935	+	AGUUGACAUAUUGACUGGUACAAACAAGGG	18	15	143	10	9	23	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1431207-1431924	Cluster_7179	Pocillopora_meandrina_HIv1___Sc0000039	1431207	1431924	718	3545	408	1.0	+	UGGCUGUGAUGAACUUAC	293	2573	421	384	95	36	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1462810-1463225	Cluster_7180	Pocillopora_meandrina_HIv1___Sc0000039	1462810	1463225	416	191	14	0.9633507853403142	+	UCCGCUACUUUGACCC	126	185	3	2	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1582816-1583244	Cluster_7181	Pocillopora_meandrina_HIv1___Sc0000039	1582816	1583244	429	82	8	0.9512195121951219	+	UGGAUUAUCAUUUUUUGUUAGUGUUGGUG	48	0	81	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1662139-1662566	Cluster_7182	Pocillopora_meandrina_HIv1___Sc0000039	1662139	1662566	428	104	44	0.0	-	UGGUGAAGGAACUAAGUUACGCUUGUAGG	22	5	92	2	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1812903-1813329	Cluster_7183	Pocillopora_meandrina_HIv1___Sc0000039	1812903	1813329	427	209	44	0.7368421052631579	.	UGGGUCUACUUCGAAUUCAUCGUUGUU	75	0	198	2	1	2	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:1906527-1906941	Cluster_7184	Pocillopora_meandrina_HIv1___Sc0000039	1906527	1906941	415	142	10	1.0	+	GACGAAGUGGCCGAG	71	142	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2015662-2016203	Cluster_7185	Pocillopora_meandrina_HIv1___Sc0000039	2015662	2016203	542	695	278	0.0	-	UGACUAACCAGGAGAUGAUAUUU	90	124	320	12	27	158	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2019639-2020189	Cluster_7186	Pocillopora_meandrina_HIv1___Sc0000039	2019639	2020189	551	3857	806	0.0012963443090484833	-	CUUGACUAACCAGGAGAUGACAUUU	539	455	2480	79	259	358	226	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2075617-2076041	Cluster_7187	Pocillopora_meandrina_HIv1___Sc0000039	2075617	2076041	425	290	210	0.996551724137931	+	AUCUGGAUGAGACGUAUGCGAGUGCUCA	7	104	109	18	24	15	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2076937-2077481	Cluster_7188	Pocillopora_meandrina_HIv1___Sc0000039	2076937	2077481	545	4349	766	0.9995401241664751	+	CCUGGGCUCCUAUGACAUUU	523	1618	1523	186	214	146	662	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2187027-2187479	Cluster_7189	Pocillopora_meandrina_HIv1___Sc0000039	2187027	2187479	453	440	93	0.9977272727272727	+	UCUGUUAAGAAAUACCACAAGGA	117	33	19	13	53	198	124	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2282094-2282550	Cluster_7190	Pocillopora_meandrina_HIv1___Sc0000039	2282094	2282550	457	2638	313	0.009097801364670205	-	UUCGAUCCUAAAUUCUCUUCAUGCUUCUG	415	52	2226	34	41	213	72	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2285405-2285833	Cluster_7191	Pocillopora_meandrina_HIv1___Sc0000039	2285405	2285833	429	125	49	0.008	-	AGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	18	2	120	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2337808-2338355	Cluster_7192	Pocillopora_meandrina_HIv1___Sc0000039	2337808	2338355	548	605	143	0.12892561983471074	-	UAUGUUUUGAUCGCUUGGAGUUUUGUGU	179	21	460	6	35	76	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2383393-2383821	Cluster_7193	Pocillopora_meandrina_HIv1___Sc0000039	2383393	2383821	429	1541	131	0.02465931213497729	-	UAUGUUUUGAUCGCUUGAGAGUUUUGUGU	583	11	1510	4	5	9	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2398032-2398673	Cluster_7194	Pocillopora_meandrina_HIv1___Sc0000039	2398032	2398673	642	1172	297	0.4513651877133106	.	UAUGUUUUGAUCGCUAGAGAGUUUUGUGU	120	81	964	42	37	16	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2419810-2420247	Cluster_7195	Pocillopora_meandrina_HIv1___Sc0000039	2419810	2420247	438	1836	256	0.008714596949891068	-	UGGUAGUGGUUUUUUGGAUCCUGAUUGGU	197	35	1744	14	13	13	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2434444-2434872	Cluster_7196	Pocillopora_meandrina_HIv1___Sc0000039	2434444	2434872	429	286	73	0.027972027972027972	-	UUCGAUCCUAAAUUCUCUUCAUGCUUCUG	68	17	214	3	5	36	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2437888-2438315	Cluster_7197	Pocillopora_meandrina_HIv1___Sc0000039	2437888	2438315	428	95	35	0.0	-	AGUAGUGGUUUUUUGGAUCCUGAUUGGUGU	22	4	89	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2460549-2460955	Cluster_7198	Pocillopora_meandrina_HIv1___Sc0000039	2460549	2460955	407	91	56	0.0	-	AAUGAAAUGUUUAAACGAAAAUAGUAGAAU	13	4	84	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2462950-2463371	Cluster_7199	Pocillopora_meandrina_HIv1___Sc0000039	2462950	2463371	422	163	75	0.38650306748466257	.	GGCAGUGGUUAUUUGGAUCCUGAUUGGUGU	17	21	129	1	1	8	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2491390-2491817	Cluster_7200	Pocillopora_meandrina_HIv1___Sc0000039	2491390	2491817	428	505	122	0.061386138613861385	-	UUCGAUCCUAAAUUCUCUUCAUG	61	21	220	20	24	161	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2492123-2492546	Cluster_7201	Pocillopora_meandrina_HIv1___Sc0000039	2492123	2492546	424	159	81	0.012578616352201259	-	UUUGUAAAUUGUUAAAAUGUAGGGAAUCUC	13	4	147	1	1	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000039:2494721-2495151	Cluster_7202	Pocillopora_meandrina_HIv1___Sc0000039	2494721	2495151	431	713	155	0.0070126227208976155	-	AGCAGUGGUUUUCUGGAUCCUGAUUGGUG	140	40	654	10	5	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:139375-139790	Cluster_7203	Pocillopora_meandrina_HIv1___Sc0000040	139375	139790	416	103	4	1.0	+	CGUGGAAGGUAGGUCG	87	103	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:152062-152477	Cluster_7204	Pocillopora_meandrina_HIv1___Sc0000040	152062	152477	416	117	33	0.2905982905982906	.	GUGUGUGUCUCUCUGUCA	37	100	4	5	3	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:241239-241665	Cluster_7205	Pocillopora_meandrina_HIv1___Sc0000040	241239	241665	427	178	63	1.0	+	UUUGAUUGACGUACGGUAUUUGAGACGC	21	4	165	2	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:294499-295072	Cluster_7206	Pocillopora_meandrina_HIv1___Sc0000040	294499	295072	574	3311	223	0.008154636061612805	-	AAGAUGUCGAGCGAUUUCGGAACGGGUU	1117	28	3105	4	4	33	137	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:302280-302702	Cluster_7207	Pocillopora_meandrina_HIv1___Sc0000040	302280	302702	423	112	34	1.0	+	CUUGAAUCGUUUGGACUGCGCCA	31	8	2	17	38	40	7	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:320127-320708	Cluster_7208	Pocillopora_meandrina_HIv1___Sc0000040	320127	320708	582	1502	272	0.9773635153129161	+	UGAACCGUGCCGAUCUGCUGCCCUUUGA	305	4	1476	1	1	12	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:321042-321470	Cluster_7209	Pocillopora_meandrina_HIv1___Sc0000040	321042	321470	429	302	64	0.9801324503311258	+	UCCGAUUUAAAAGAUUCUUUGUUUGU	73	1	292	0	3	6	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:563526-564122	Cluster_7210	Pocillopora_meandrina_HIv1___Sc0000040	563526	564122	597	5554	491	0.003060857039971192	-	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	816	13	5494	2	4	8	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:732461-732880	Cluster_7211	Pocillopora_meandrina_HIv1___Sc0000040	732461	732880	420	76	20	0.0	-	GACUAACAGAAGGAACUUUUAAACAACGUC	34	5	70	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:786458-786886	Cluster_7212	Pocillopora_meandrina_HIv1___Sc0000040	786458	786886	429	428	113	0.1985981308411215	-	UUGUAUUUGCUGAUCUAUUUGACAUCCUU	112	26	371	6	6	3	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:909113-909543	Cluster_7213	Pocillopora_meandrina_HIv1___Sc0000040	909113	909543	431	717	108	0.9163179916317992	+	UGCGAUUUCGUUCCUCGUCCUUGAUGAU	121	4	703	0	3	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:916705-917120	Cluster_7214	Pocillopora_meandrina_HIv1___Sc0000040	916705	917120	416	245	13	0.0	-	GCUGCCGGUCGUUGA	90	245	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:936689-937118	Cluster_7215	Pocillopora_meandrina_HIv1___Sc0000040	936689	937118	430	200	77	0.005	-	UCAGUCUCUGCAAUUCUCUGCUUUAGCAGC	19	2	194	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:956195-956600	Cluster_7216	Pocillopora_meandrina_HIv1___Sc0000040	956195	956600	406	251	181	0.2589641434262948	.	GAAGUUCUGGUUUAAA	7	125	71	30	7	8	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:957810-958239	Cluster_7217	Pocillopora_meandrina_HIv1___Sc0000040	957810	958239	430	166	77	0.006024096385542169	-	UGCGAACUCGACUGCCGCCACGUGUGUA	22	0	165	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1037092-1037596	Cluster_7218	Pocillopora_meandrina_HIv1___Sc0000040	1037092	1037596	505	649	136	0.026194144838212634	-	UGAGGAUCGUCAAAUAUCUCCAGAAGACGU	131	3	630	3	4	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1102508-1102935	Cluster_7219	Pocillopora_meandrina_HIv1___Sc0000040	1102508	1102935	428	254	113	0.011811023622047244	-	UCAGUCUCUGCAAUUCUCUGCUUUAGC	26	5	239	1	1	5	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1137698-1138124	Cluster_7220	Pocillopora_meandrina_HIv1___Sc0000040	1137698	1138124	427	192	72	0.75	.	ACAGAGAACAGAAGAGGAUUUAGCAUUU	13	5	165	5	3	0	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1139158-1139587	Cluster_7221	Pocillopora_meandrina_HIv1___Sc0000040	1139158	1139587	430	270	89	0.8851851851851852	+	AUGGAGAGCAAAAGACUGGACGAUUAGGA	24	6	232	1	3	13	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1156938-1157618	Cluster_7222	Pocillopora_meandrina_HIv1___Sc0000040	1156938	1157618	681	401	163	0.286783042394015	.	GUUGACGUGAACGGUGUUAGAUGCCGAGC	44	3	382	2	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1158929-1159356	Cluster_7223	Pocillopora_meandrina_HIv1___Sc0000040	1158929	1159356	428	156	52	0.03205128205128205	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	48	2	153	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1159394-1159954	Cluster_7224	Pocillopora_meandrina_HIv1___Sc0000040	1159394	1159954	561	1236	310	0.03478964401294499	-	UAUAUCUUCUUCGGACGCCCACGGCGCG	311	3	1190	1	1	18	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1189637-1190272	Cluster_7225	Pocillopora_meandrina_HIv1___Sc0000040	1189637	1190272	636	513	180	0.7017543859649122	.	GUGUAUACGAUCAGAACGGAAAUGAAUGU	123	7	451	1	7	6	41	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1191425-1191854	Cluster_7226	Pocillopora_meandrina_HIv1___Sc0000040	1191425	1191854	430	249	76	0.8955823293172691	+	GGAGAGCAAAAGACUGGACGAUUAGGAAA	29	2	217	0	5	9	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1210222-1211396	Cluster_7227	Pocillopora_meandrina_HIv1___Sc0000040	1210222	1211396	1175	867	388	0.9192618223760092	+	UAAGUGCGCUCUCAUGUAGAUAUAUGUG	78	17	778	3	10	22	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1211682-1212113	Cluster_7228	Pocillopora_meandrina_HIv1___Sc0000040	1211682	1212113	432	485	194	0.9422680412371134	+	UAAUUCCAUCUUGCGCUGAUAGCUCGUC	53	5	468	0	0	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1212129-1213100	Cluster_7229	Pocillopora_meandrina_HIv1___Sc0000040	1212129	1213100	972	627	303	0.8596491228070176	+	UUUGUCGUGAUCUUUCACUGCUUCUUGC	51	11	579	5	2	11	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1213107-1215104	Cluster_7230	Pocillopora_meandrina_HIv1___Sc0000040	1213107	1215104	1998	4140	1421	0.9007246376811594	+	UGCGAAGAUUUUCGAUUUGAUGGGUUGA	344	31	3876	28	29	53	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1221387-1221814	Cluster_7231	Pocillopora_meandrina_HIv1___Sc0000040	1221387	1221814	428	272	68	0.8786764705882353	+	CAGUUCAGUAUUUUAGGAGUCGAUCCCA	61	5	200	0	5	3	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1222588-1223017	Cluster_7232	Pocillopora_meandrina_HIv1___Sc0000040	1222588	1223017	430	807	103	0.9702602230483272	+	UGUGCUCAUACCUUAGCUGUGGCUGAAAUG	201	6	795	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1223568-1223997	Cluster_7233	Pocillopora_meandrina_HIv1___Sc0000040	1223568	1223997	430	275	80	0.96	+	AUGGAGAGCAAAAGACUGGACGAUUAGGA	33	2	235	1	3	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1315909-1316345	Cluster_7234	Pocillopora_meandrina_HIv1___Sc0000040	1315909	1316345	437	241	93	0.04564315352697095	-	UAGAAAACAUUUUCAGUCUGCAAUUCUCUGC	38	11	220	1	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1339764-1341067	Cluster_7235	Pocillopora_meandrina_HIv1___Sc0000040	1339764	1341067	1304	10168	811	0.011408339889850511	-	UGAAGACAAGUGAUUCGCAAUCGAGGGG	882	473	9095	5	28	221	346	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1459450-1460474	Cluster_7236	Pocillopora_meandrina_HIv1___Sc0000040	1459450	1460474	1025	4542	752	0.24900924702774108	.	GUGUGAAACAUGUGGCCUCAGGCAGAAAGU	729	88	3507	13	26	458	450	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1491678-1492232	Cluster_7237	Pocillopora_meandrina_HIv1___Sc0000040	1491678	1492232	555	513	155	0.37816764132553604	.	CUAUGUGACAUCCCUGGACAAAGUUCCUCC	63	2	461	11	1	14	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1738924-1739371	Cluster_7238	Pocillopora_meandrina_HIv1___Sc0000040	1738924	1739371	448	3357	60	0.06523681858802502	-	AUACUGAUAAUUGUGGUGACCAGACG	705	5	3165	38	3	30	116	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1782068-1782470	Cluster_7239	Pocillopora_meandrina_HIv1___Sc0000040	1782068	1782470	403	149	67	0.8926174496644296	+	UGAAGGUAACGUUUCAUCCCGACUGAGA	25	8	133	2	2	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1809152-1809566	Cluster_7240	Pocillopora_meandrina_HIv1___Sc0000040	1809152	1809566	415	159	15	0.006289308176100629	-	CUCGGGCUGAGACGU	61	159	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1866697-1867124	Cluster_7241	Pocillopora_meandrina_HIv1___Sc0000040	1866697	1867124	428	126	27	0.9603174603174603	+	UGCGAUUACAGAGGUGCGUUGGAACUCA	83	0	126	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1873852-1874282	Cluster_7242	Pocillopora_meandrina_HIv1___Sc0000040	1873852	1874282	431	237	91	0.9282700421940928	+	UUCUGCUAGGUUUGAAGUAGCUUUCUAAAGC	98	4	227	0	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1895511-1896019	Cluster_7243	Pocillopora_meandrina_HIv1___Sc0000040	1895511	1896019	509	200	83	0.105	-	UGUACCAUCUGACCUUGCCAAAAUUC	18	4	185	4	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1925253-1925669	Cluster_7244	Pocillopora_meandrina_HIv1___Sc0000040	1925253	1925669	417	311	8	0.0	-	UCCGCUACUUUGACCG	154	310	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1928526-1928955	Cluster_7245	Pocillopora_meandrina_HIv1___Sc0000040	1928526	1928955	430	244	55	0.01639344262295082	-	UGAAUGCCGGUAUAGCAAGCUCAGCUCU	45	3	235	4	2	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1966896-1968375	Cluster_7246	Pocillopora_meandrina_HIv1___Sc0000040	1966896	1968375	1480	2909	1053	0.20350635957373667	.	UAGAAGGAUUUGAAAAUGUCAGGCAUGU	160	48	2661	18	21	30	131	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1968942-1969367	Cluster_7247	Pocillopora_meandrina_HIv1___Sc0000040	1968942	1969367	426	159	89	0.9119496855345912	+	UACUUGACUCUAGGAUACACAAGUUCUGG	28	1	150	1	1	0	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:1969503-1970721	Cluster_7248	Pocillopora_meandrina_HIv1___Sc0000040	1969503	1970721	1219	3063	1042	0.6764609859614756	.	AGGUGUAGAAUGUAAAAAGCAGCU	144	34	2628	21	27	68	285	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2002375-2002789	Cluster_7249	Pocillopora_meandrina_HIv1___Sc0000040	2002375	2002789	415	128	6	0.0078125	-	CGACCGUGGUGGACG	77	126	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2227580-2228008	Cluster_7250	Pocillopora_meandrina_HIv1___Sc0000040	2227580	2228008	429	485	50	0.9938144329896907	+	UUUUCGAAGAUCUUUCUCUACUGUUGA	177	12	402	17	21	15	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2234514-2234936	Cluster_7251	Pocillopora_meandrina_HIv1___Sc0000040	2234514	2234936	423	265	101	0.9245283018867925	+	UGAAAGGCUGUGACCGAGGUCA	28	122	8	76	53	5	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2282624-2283051	Cluster_7252	Pocillopora_meandrina_HIv1___Sc0000040	2282624	2283051	428	252	34	0.9880952380952381	+	UUCUUUACGUGCUCAACUUCUUGAACUU	84	1	237	0	0	10	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2323975-2324437	Cluster_7253	Pocillopora_meandrina_HIv1___Sc0000040	2323975	2324437	463	817	100	0.9681762545899633	+	UGCAAACCCAAUUUGGACGGUUCAACUCC	529	3	795	10	2	2	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000040:2425460-2426225	Cluster_7254	Pocillopora_meandrina_HIv1___Sc0000040	2425460	2426225	766	3705	410	0.4553306342780027	.	UUGUCUGUAAACAGUGCAAUACUAGCUUUGC	599	25	3486	13	15	116	50	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:63964-64380	Cluster_7255	Pocillopora_meandrina_HIv1___Sc0000041	63964	64380	417	121	30	1.0	+	GACGGAUUGAGGAAGCA	74	93	17	0	0	1	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:179302-180091	Cluster_7256	Pocillopora_meandrina_HIv1___Sc0000041	179302	180091	790	513	176	0.042884990253411304	-	AAGUUUACUUGUUGUUCUUCUCUGAGU	65	24	445	1	15	27	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:251235-251699	Cluster_7257	Pocillopora_meandrina_HIv1___Sc0000041	251235	251699	465	1119	102	0.9392314566577301	+	GACGGAUUGAGGAAGCA	674	853	177	13	51	1	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:363575-363990	Cluster_7258	Pocillopora_meandrina_HIv1___Sc0000041	363575	363990	416	84	4	1.0	+	GCCGGUAUAGCUCAGU	76	84	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:396145-396575	Cluster_7259	Pocillopora_meandrina_HIv1___Sc0000041	396145	396575	431	1232	29	0.0016233766233766235	-	CGGCCUGAAAAAAAAAAAAAAAAAAAAAAAA	521	0	1230	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:433194-433603	Cluster_7260	Pocillopora_meandrina_HIv1___Sc0000041	433194	433603	410	94	40	0.7340425531914894	.	UAUGAUAUCACUGUGGAGCGAGG	19	5	56	1	0	27	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:435916-436330	Cluster_7261	Pocillopora_meandrina_HIv1___Sc0000041	435916	436330	415	108	5	0.0	-	AUGGACUACAAUUUC	104	108	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:725433-725860	Cluster_7262	Pocillopora_meandrina_HIv1___Sc0000041	725433	725860	428	85	20	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	22	0	83	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1104897-1105322	Cluster_7263	Pocillopora_meandrina_HIv1___Sc0000041	1104897	1105322	426	248	107	0.6088709677419355	.	GUUGACGUGAACGGUGUUAGAUGCCGAGC	36	1	212	1	1	5	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1107410-1107837	Cluster_7264	Pocillopora_meandrina_HIv1___Sc0000041	1107410	1107837	428	179	42	0.0111731843575419	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	49	1	176	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1145307-1145724	Cluster_7265	Pocillopora_meandrina_HIv1___Sc0000041	1145307	1145724	418	140	14	0.9571428571428572	+	AACCUGGUUGAUCCUGCA	96	140	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1287240-1287657	Cluster_7266	Pocillopora_meandrina_HIv1___Sc0000041	1287240	1287657	418	1720	19	0.0	-	GAUGAGGCUCAUAAAA	584	1720	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1434797-1435211	Cluster_7267	Pocillopora_meandrina_HIv1___Sc0000041	1434797	1435211	415	216	173	1.0	+	AUCUUGUGCUGCGUCUGC	5	93	56	16	26	15	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1438371-1439140	Cluster_7268	Pocillopora_meandrina_HIv1___Sc0000041	1438371	1439140	770	6828	1256	0.10413005272407733	-	UGGGUCUUUUUUUUACUUCGGAAGAAUU	738	248	6204	79	62	67	168	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1439161-1442536	Cluster_7269	Pocillopora_meandrina_HIv1___Sc0000041	1439161	1442536	3376	9466	2431	0.1415592647369533	-	AGCAGGAAAAAAAGAUGAUGAACUUGUU	421	293	8430	118	117	197	311	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1507467-1507896	Cluster_7270	Pocillopora_meandrina_HIv1___Sc0000041	1507467	1507896	430	168	25	0.005952380952380952	-	UGUGCAUUGACUGUCAUUUCUAAAUAAACU	79	1	167	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1508695-1509914	Cluster_7271	Pocillopora_meandrina_HIv1___Sc0000041	1508695	1509914	1220	16257	2336	0.04182813557236883	-	UGGAAGAAUGUUACAGUGAACUGGUUGU	1585	127	15594	48	114	185	189	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1551017-1551434	Cluster_7272	Pocillopora_meandrina_HIv1___Sc0000041	1551017	1551434	418	131	9	0.0	-	CUUUGGUGGAGAUGGAUG	64	131	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1579105-1579671	Cluster_7273	Pocillopora_meandrina_HIv1___Sc0000041	1579105	1579671	567	2271	491	0.9141347424042272	+	UUAAACCGACUCACAGUCCGAUUCGAAU	259	22	2133	7	15	27	67	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:1775679-1776094	Cluster_7274	Pocillopora_meandrina_HIv1___Sc0000041	1775679	1776094	416	674	11	0.9955489614243324	+	GGUUGGAUCCGGCCCA	651	671	1	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2102529-2103800	Cluster_7275	Pocillopora_meandrina_HIv1___Sc0000041	2102529	2103800	1272	1241	520	0.09186140209508462	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	88	14	1175	4	5	11	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2104670-2105097	Cluster_7276	Pocillopora_meandrina_HIv1___Sc0000041	2104670	2105097	428	151	69	0.08609271523178808	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	54	1	140	1	3	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2105181-2106390	Cluster_7277	Pocillopora_meandrina_HIv1___Sc0000041	2105181	2106390	1210	2009	832	0.15430562468889994	-	UCCAAUCACACACAGUUCUCCUGCGGC	71	26	1819	8	9	47	100	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000041:2106455-2106994	Cluster_7278	Pocillopora_meandrina_HIv1___Sc0000041	2106455	2106994	540	750	239	0.31333333333333335	.	UAUAUCUCCCAGGGAGUCUCCUCUGUC	66	24	678	3	5	25	15	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:113049-114320	Cluster_7279	Pocillopora_meandrina_HIv1___Sc0000042	113049	114320	1272	1252	519	0.08306709265175719	-	UGUACCUUCAGUGAUAAUCAGACCUUUG	79	13	1186	4	10	14	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:114556-114991	Cluster_7280	Pocillopora_meandrina_HIv1___Sc0000042	114556	114991	436	1265	290	0.05533596837944664	-	UGAUCUGUCGUGACUCUGAAUUAAGUUC	139	23	1195	2	3	23	19	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:115077-116127	Cluster_7281	Pocillopora_meandrina_HIv1___Sc0000042	115077	116127	1051	2859	766	0.18048268625393493	-	UGCUUCAUUUUGGUUCUGUAGUAACACA	247	30	2475	20	39	67	228	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:116502-117332	Cluster_7282	Pocillopora_meandrina_HIv1___Sc0000042	116502	117332	831	846	385	0.07919621749408984	-	UCAUGGAUUUAUCAGCUAUUACUUUGGU	40	18	784	7	6	8	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:231948-232363	Cluster_7283	Pocillopora_meandrina_HIv1___Sc0000042	231948	232363	416	282	9	0.9893617021276596	+	UUCCGAGGUCGCAGUC	257	279	1	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:249250-249840	Cluster_7284	Pocillopora_meandrina_HIv1___Sc0000042	249250	249840	591	1946	374	0.9994861253854059	+	GGAUAGCUGACUUGUGCGAAUAUUA	286	221	1229	53	32	64	347	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:380044-380458	Cluster_7285	Pocillopora_meandrina_HIv1___Sc0000042	380044	380458	415	130	13	0.038461538461538464	-	CGAGACGAGACGAGG	113	128	1	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:593455-593869	Cluster_7286	Pocillopora_meandrina_HIv1___Sc0000042	593455	593869	415	357	7	1.0	+	GCGACUGCUGCCGGC	343	357	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:624742-625606	Cluster_7287	Pocillopora_meandrina_HIv1___Sc0000042	624742	625606	865	1456	413	0.845467032967033	+	UGAUCUGGAAUUCCGAAUCUGGAAAAUGCA	182	9	1400	5	4	7	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:625815-626879	Cluster_7288	Pocillopora_meandrina_HIv1___Sc0000042	625815	626879	1065	1565	383	0.9226837060702875	+	UGUUAAUGUCUGUACGAGUCUCUCGUC	178	9	1497	2	12	13	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:627094-627506	Cluster_7289	Pocillopora_meandrina_HIv1___Sc0000042	627094	627506	413	242	136	0.8925619834710744	+	UGACGUAACUUUUCCAAUGAACUUAACGA	16	10	212	0	8	4	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:627868-628442	Cluster_7290	Pocillopora_meandrina_HIv1___Sc0000042	627868	628442	575	856	274	0.8060747663551402	+	UAAGUAACAUUUGUUUUCGGCGUGCAGA	126	4	800	0	5	19	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:709172-709586	Cluster_7291	Pocillopora_meandrina_HIv1___Sc0000042	709172	709586	415	77	6	1.0	+	AUGGACUAUGAUUUUU	28	77	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1021394-1022282	Cluster_7292	Pocillopora_meandrina_HIv1___Sc0000042	1021394	1022282	889	1007	258	0.9553128103277061	+	AGGAUCUGCAUCACCUGGAUAAAUUUGC	152	21	897	6	7	28	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1141894-1142308	Cluster_7293	Pocillopora_meandrina_HIv1___Sc0000042	1141894	1142308	415	88	7	0.0	-	CCCUGCCGGAACCACC	36	88	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1270193-1270608	Cluster_7294	Pocillopora_meandrina_HIv1___Sc0000042	1270193	1270608	416	217	125	0.004608294930875576	-	AUCGCUUGUGGUGCCCUCG	11	121	25	21	22	18	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1278999-1279424	Cluster_7295	Pocillopora_meandrina_HIv1___Sc0000042	1278999	1279424	426	116	28	0.9224137931034483	+	UCGUGAUAUUCUUUAGCCUUCUGAUAUU	45	1	114	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1347342-1347770	Cluster_7296	Pocillopora_meandrina_HIv1___Sc0000042	1347342	1347770	429	133	55	1.0	+	CAAUGUGCGACGGUUUAAACUUACAAGUUA	39	17	105	3	3	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1592868-1593282	Cluster_7297	Pocillopora_meandrina_HIv1___Sc0000042	1592868	1593282	415	76	3	0.0	-	GAUGAGGCUCAUAAC	74	76	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1622587-1623139	Cluster_7298	Pocillopora_meandrina_HIv1___Sc0000042	1622587	1623139	553	236	80	0.9491525423728814	+	UAUACUCCAAAGGUUCUGAAAACGAAUG	38	5	198	2	4	20	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1623492-1624090	Cluster_7299	Pocillopora_meandrina_HIv1___Sc0000042	1623492	1624090	599	1480	307	0.8135135135135135	+	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	476	11	1389	6	5	15	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1719575-1720000	Cluster_7300	Pocillopora_meandrina_HIv1___Sc0000042	1719575	1720000	426	114	26	1.0	+	AACUACUGCUCGUACUCUAGAUGACAAUCA	20	0	114	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1728030-1728459	Cluster_7301	Pocillopora_meandrina_HIv1___Sc0000042	1728030	1728459	430	417	110	0.8249400479616307	+	UGCGAUUACAGAGGUGCGUUGGAACUCU	125	35	367	3	2	1	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1781534-1781951	Cluster_7302	Pocillopora_meandrina_HIv1___Sc0000042	1781534	1781951	418	108	8	0.9814814814814815	+	CUUCCAAGACUCCAGACA	89	108	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1908956-1910728	Cluster_7303	Pocillopora_meandrina_HIv1___Sc0000042	1908956	1910728	1773	9272	2486	0.9233175150992234	+	UGAUAGACUGCACGACGAUUUACGUCA	509	142	8370	68	77	266	349	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000042:1910782-1911458	Cluster_7304	Pocillopora_meandrina_HIv1___Sc0000042	1910782	1911458	677	8125	576	0.9970461538461538	+	UGUGACUUCUCUAUCCGCACGCGGCAUU	2321	6	8011	5	50	20	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:45034-45461	Cluster_7305	Pocillopora_meandrina_HIv1___Sc0000043	45034	45461	428	195	101	0.9025641025641026	+	UAUUCCAAGAUUGGCCGUACCAGAGACAUGU	19	5	178	1	2	5	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:118478-119696	Cluster_7306	Pocillopora_meandrina_HIv1___Sc0000043	118478	119696	1219	6099	1293	0.25069683554681094	.	UGAUCAACUGAGAGCAUUAAGUAUAACUGG	458	93	5469	46	61	198	232	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:142705-143357	Cluster_7307	Pocillopora_meandrina_HIv1___Sc0000043	142705	143357	653	1736	523	0.001152073732718894	-	UUGACUGAUGCAGUCUUUAGUAAUCUGAUGG	220	295	1069	93	79	141	59	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:208491-208980	Cluster_7308	Pocillopora_meandrina_HIv1___Sc0000043	208491	208980	490	1177	235	0.00594732370433305	-	AGUGAAUGAUGAAAUGUGUAUU	139	518	238	136	223	33	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:219904-220394	Cluster_7309	Pocillopora_meandrina_HIv1___Sc0000043	219904	220394	491	690	197	0.0	-	AGUGAGUGAUGAAAUGUGU	42	294	211	71	70	17	27	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:383154-383582	Cluster_7310	Pocillopora_meandrina_HIv1___Sc0000043	383154	383582	429	347	127	0.0	-	GAUCUCUCGUCCUUAUUCUGAUGA	32	14	242	5	16	10	60	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:439739-440714	Cluster_7311	Pocillopora_meandrina_HIv1___Sc0000043	439739	440714	976	3568	716	0.22617713004484305	.	UGUGAUCGCAUAUAGCUACUUCUGU	399	119	3232	28	32	71	86	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:555393-555820	Cluster_7312	Pocillopora_meandrina_HIv1___Sc0000043	555393	555820	428	85	12	0.011764705882352941	-	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	43	0	84	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:617190-617606	Cluster_7313	Pocillopora_meandrina_HIv1___Sc0000043	617190	617606	417	50274	51	0.9999403270079962	+	CUUUCCGAGGUCGCA	46501	50274	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:657100-657521	Cluster_7314	Pocillopora_meandrina_HIv1___Sc0000043	657100	657521	422	20666	150	1.0	+	CGUGGUCGAGGUGAG	5740	20666	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:664135-664558	Cluster_7315	Pocillopora_meandrina_HIv1___Sc0000043	664135	664558	424	250	33	0.98	+	UGGCCUGAAAAAAAAAAAA	31	57	50	32	22	40	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:682728-683211	Cluster_7316	Pocillopora_meandrina_HIv1___Sc0000043	682728	683211	484	277	165	0.0	-	GAAAGGAGAGUGAGAAGCCUGUUA	32	89	92	14	14	24	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:870038-870714	Cluster_7317	Pocillopora_meandrina_HIv1___Sc0000043	870038	870714	677	8153	568	0.0020851220409665154	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2182	13	8016	7	50	37	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:870768-871322	Cluster_7318	Pocillopora_meandrina_HIv1___Sc0000043	870768	871322	555	2710	593	0.04981549815498155	-	UAUUGUAUCUGAUGUUUUCAAUGGUGUA	373	32	2518	6	14	49	91	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:933766-934194	Cluster_7319	Pocillopora_meandrina_HIv1___Sc0000043	933766	934194	429	199	54	0.9346733668341709	+	CUCACUAGCAAUGUAUCAGAUCGUUGACU	53	12	150	7	22	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1057389-1057816	Cluster_7320	Pocillopora_meandrina_HIv1___Sc0000043	1057389	1057816	428	178	82	0.1404494382022472	-	UGUUUGAUCCAAUUCAGGAUACUUUGGC	24	3	160	2	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1058179-1058608	Cluster_7321	Pocillopora_meandrina_HIv1___Sc0000043	1058179	1058608	430	690	173	0.06666666666666667	-	UGAACGAUCUUCUCACCAUCUCUUCUGGAA	158	12	655	2	1	8	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1070665-1071201	Cluster_7322	Pocillopora_meandrina_HIv1___Sc0000043	1070665	1071201	537	5517	806	0.00036251586006887804	-	AUCGGUGUUCAAUGAACUGACAGUU	758	741	3435	134	333	329	545	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1099869-1100284	Cluster_7323	Pocillopora_meandrina_HIv1___Sc0000043	1099869	1100284	416	1926	59	0.9968847352024922	+	AGGGUGCUGUCGGCU	938	1915	9	1	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1193302-1193734	Cluster_7324	Pocillopora_meandrina_HIv1___Sc0000043	1193302	1193734	433	274	175	0.9963503649635036	+	AAGGUGUUCGCUCUUCU	7	158	48	29	17	14	8	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1196587-1197090	Cluster_7325	Pocillopora_meandrina_HIv1___Sc0000043	1196587	1197090	504	753	395	1.0	+	UCGAGACAGACACUUUGGCU	25	264	243	53	79	44	70	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1197261-1197923	Cluster_7326	Pocillopora_meandrina_HIv1___Sc0000043	1197261	1197923	663	600	417	1.0	+	AUGAACUGAAGCCGUUGCUGGAACGACCACU	9	211	231	33	33	38	54	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1198021-1198576	Cluster_7327	Pocillopora_meandrina_HIv1___Sc0000043	1198021	1198576	556	347	237	1.0	+	GUCUUAGCGAGGACUGCAGCGU	6	157	86	34	31	19	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1198790-1199302	Cluster_7328	Pocillopora_meandrina_HIv1___Sc0000043	1198790	1199302	513	609	342	1.0	+	UGUGAUCUUUUCGGAACCGAGGAACA	28	154	268	26	39	44	78	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1199683-1200151	Cluster_7329	Pocillopora_meandrina_HIv1___Sc0000043	1199683	1200151	469	436	275	1.0	+	GAGACUGAGGAACAACGUACCCA	11	118	140	47	45	46	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1200358-1200876	Cluster_7330	Pocillopora_meandrina_HIv1___Sc0000043	1200358	1200876	519	1144	356	1.0	+	GUUCAGUCGUUUGGUGGAAACCUUA	234	157	468	73	69	312	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1201225-1201745	Cluster_7331	Pocillopora_meandrina_HIv1___Sc0000043	1201225	1201745	521	552	349	0.9583333333333334	+	GGCAAUGGCUGCUGGAAGCUCU	14	198	177	38	66	25	48	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1201775-1202262	Cluster_7332	Pocillopora_meandrina_HIv1___Sc0000043	1201775	1202262	488	566	342	0.9946996466431095	+	GUUGUCCAAGCAGACGAGACUCU	12	193	186	35	55	59	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1202373-1202797	Cluster_7333	Pocillopora_meandrina_HIv1___Sc0000043	1202373	1202797	425	292	203	0.9897260273972602	+	CAGCUGUGUAUGCUCUACGAAGA	6	91	130	16	21	16	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1202918-1203472	Cluster_7334	Pocillopora_meandrina_HIv1___Sc0000043	1202918	1203472	555	765	507	0.9947712418300654	+	AGCGGUGUUCAACUUGGUAGUCA	15	238	270	48	63	73	73	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1204934-1205448	Cluster_7335	Pocillopora_meandrina_HIv1___Sc0000043	1204934	1205448	515	437	321	0.988558352402746	+	GACCGAAACGAAGCUUAGACAAGA	6	167	143	31	36	29	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1205695-1206724	Cluster_7336	Pocillopora_meandrina_HIv1___Sc0000043	1205695	1206724	1030	975	647	0.9938461538461538	+	ACUGGAUUAGGUGGCAGAUU	9	417	323	64	60	48	63	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1207097-1207530	Cluster_7337	Pocillopora_meandrina_HIv1___Sc0000043	1207097	1207530	434	274	184	0.9963503649635036	+	AUCUACAGGAACACAGAGCUGGACGGAUUUG	9	126	101	14	9	13	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1207804-1208251	Cluster_7338	Pocillopora_meandrina_HIv1___Sc0000043	1207804	1208251	448	345	249	0.9942028985507246	+	AACUGGACUCUGAAGGCA	6	124	112	28	32	23	26	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1208427-1209620	Cluster_7339	Pocillopora_meandrina_HIv1___Sc0000043	1208427	1209620	1194	1315	909	0.9992395437262357	+	CGCCUCGCGACAGUUGUGUAUAUU	7	455	482	113	95	81	89	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1210089-1210639	Cluster_7340	Pocillopora_meandrina_HIv1___Sc0000043	1210089	1210639	551	840	473	0.9976190476190476	+	CAUGGCUGAGGAAAGUU	16	330	277	68	48	59	58	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1210927-1211411	Cluster_7341	Pocillopora_meandrina_HIv1___Sc0000043	1210927	1211411	485	418	255	1.0	+	AAUGAUGUGCUACAAACUUCUGAAAAAGU	23	86	209	24	39	32	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1211639-1212558	Cluster_7342	Pocillopora_meandrina_HIv1___Sc0000043	1211639	1212558	920	908	596	0.9955947136563876	+	AUUUGUGGAGCAGGAAA	23	330	277	90	82	64	65	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1212786-1213213	Cluster_7343	Pocillopora_meandrina_HIv1___Sc0000043	1212786	1213213	428	387	218	0.9948320413436692	+	UCAAGUAGAGAUCGUGCGUGGAAGCA	15	165	109	48	18	23	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1213345-1213863	Cluster_7344	Pocillopora_meandrina_HIv1___Sc0000043	1213345	1213863	519	517	350	0.9980657640232108	+	GGCAUGUGUGGUGACUGUAAUGCAGAACA	10	162	177	41	54	38	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1213866-1214748	Cluster_7345	Pocillopora_meandrina_HIv1___Sc0000043	1213866	1214748	883	1853	992	0.9989206691851052	+	UGCGCUCUUCGUAACUUACAUUUCUGUUCA	56	528	817	92	154	123	139	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1520956-1521381	Cluster_7346	Pocillopora_meandrina_HIv1___Sc0000043	1520956	1521381	426	144	90	0.125	-	AAUGGGAAAACGAGAAUAGCGUGAGUGUU	18	4	122	3	2	2	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1688244-1689773	Cluster_7347	Pocillopora_meandrina_HIv1___Sc0000043	1688244	1689773	1530	2423	718	0.9756500206355757	+	UGAGACUCUCUUGUUGUAAUAUUGCUUG	483	9	2346	4	5	21	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1689996-1690420	Cluster_7348	Pocillopora_meandrina_HIv1___Sc0000043	1689996	1690420	425	230	129	0.9391304347826087	+	UGUGACGCCCGGUUCUGCGUGAGCAAUGC	21	8	196	4	5	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1691428-1692467	Cluster_7349	Pocillopora_meandrina_HIv1___Sc0000043	1691428	1692467	1040	3441	823	0.981400755594304	+	UUGGAAUUGGUAGAACUGACUUUACCA	358	38	3316	13	15	28	31	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1692607-1693599	Cluster_7350	Pocillopora_meandrina_HIv1___Sc0000043	1692607	1693599	993	1093	442	0.938700823421775	+	UAAUAUCUAUUGAUCUUACGGGCUCCGCA	81	16	1027	0	6	14	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1693719-1694212	Cluster_7351	Pocillopora_meandrina_HIv1___Sc0000043	1693719	1694212	494	462	270	0.8095238095238095	+	UGUUCCGGUACAAAUUUUCCCUGCAUA	13	7	408	2	3	9	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000043:1834980-1835405	Cluster_7352	Pocillopora_meandrina_HIv1___Sc0000043	1834980	1835405	426	462	222	0.2748917748917749	.	UAAGAGCGUCUCAUUUUCUCAAUUGCUG	21	19	398	1	5	21	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:124779-125205	Cluster_7353	Pocillopora_meandrina_HIv1___Sc0000044	124779	125205	427	319	90	0.8307210031347962	+	GCGACAACUUUCGGCUACAAAUCGUGC	128	36	247	11	12	9	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:191263-191677	Cluster_7354	Pocillopora_meandrina_HIv1___Sc0000044	191263	191677	415	140	5	0.9928571428571429	+	CCGCGACUGCUGCCA	136	138	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:364704-365113	Cluster_7355	Pocillopora_meandrina_HIv1___Sc0000044	364704	365113	410	104	58	0.75	.	AAAGGAUAGAACUGACCGGUCAGG	16	2	65	5	8	1	23	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:409810-410234	Cluster_7356	Pocillopora_meandrina_HIv1___Sc0000044	409810	410234	425	39438	176	5.071251077640854e-05	-	UUCCAAAUCUGUGAUGUUAUUGA	32340	164	78	68	1061	36879	1188	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:420597-421023	Cluster_7357	Pocillopora_meandrina_HIv1___Sc0000044	420597	421023	427	201	124	0.8855721393034826	+	UGAGUCGAGGUUAUUCACAAUACGAGC	27	7	178	1	0	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:421261-421918	Cluster_7358	Pocillopora_meandrina_HIv1___Sc0000044	421261	421918	658	1041	313	0.9164265129682997	+	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	93	5	981	6	4	27	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:422138-422795	Cluster_7359	Pocillopora_meandrina_HIv1___Sc0000044	422138	422795	658	619	297	0.5702746365105008	.	UUAUUCAUCUCUUUCCGGAUCUCACUGU	33	5	548	3	7	23	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:422940-423593	Cluster_7360	Pocillopora_meandrina_HIv1___Sc0000044	422940	423593	654	588	290	0.8129251700680272	+	UGUGUCAGAUGCGUUUCAGAAAUGGUU	70	10	517	10	5	17	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:557949-558378	Cluster_7361	Pocillopora_meandrina_HIv1___Sc0000044	557949	558378	430	114	27	0.9912280701754386	+	UAAGAGCAGAAUCUCAUUGAUCUAUUUUAGA	59	10	97	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:569299-570194	Cluster_7362	Pocillopora_meandrina_HIv1___Sc0000044	569299	570194	896	1275	335	0.40078431372549017	.	UCUUGACUCUUCGCGAUAUCCUCUAUGG	208	11	1202	10	7	13	32	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:587677-588131	Cluster_7363	Pocillopora_meandrina_HIv1___Sc0000044	587677	588131	455	6149	182	0.9998373719303952	+	UUACUCUUGACGCUUAUAUCACU	1712	214	59	246	1715	3462	453	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:883695-884124	Cluster_7364	Pocillopora_meandrina_HIv1___Sc0000044	883695	884124	430	293	62	0.9795221843003413	+	CGAUCCAACAAGAACAGUAUGUGCUGACU	83	1	286	0	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1020356-1020760	Cluster_7365	Pocillopora_meandrina_HIv1___Sc0000044	1020356	1020760	405	260	199	0.0038461538461538464	-	CUAGGCAUUUUUAUUGACUGAAA	5	75	109	18	15	22	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1049958-1050372	Cluster_7366	Pocillopora_meandrina_HIv1___Sc0000044	1049958	1050372	415	1878	10	0.9989350372736954	+	CCUGCUAGAACCUCC	1154	1877	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1087018-1087438	Cluster_7367	Pocillopora_meandrina_HIv1___Sc0000044	1087018	1087438	421	312	33	0.9903846153846154	+	UAAUCUGAAGGUCGUGAGU	64	283	0	29	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1108933-1109360	Cluster_7368	Pocillopora_meandrina_HIv1___Sc0000044	1108933	1109360	428	206	68	0.009708737864077669	-	UAAUCCCAUCGAUUCUGCAGCCGCCAUU	44	6	192	1	0	4	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1109943-1110423	Cluster_7369	Pocillopora_meandrina_HIv1___Sc0000044	1109943	1110423	481	10945	529	0.003746002740977615	-	UAAUCAACUGUGGCUGUGCGAUGUUCUGC	3210	124	10644	19	22	75	61	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1155525-1155944	Cluster_7370	Pocillopora_meandrina_HIv1___Sc0000044	1155525	1155944	420	1116	32	0.9991039426523297	+	CGGCCUGAAAAAAAAAA	519	1056	14	29	16	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1162769-1163186	Cluster_7371	Pocillopora_meandrina_HIv1___Sc0000044	1162769	1163186	418	342	91	0.014619883040935672	-	UUGUAGGCGUGGGUU	57	328	5	6	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1219142-1219556	Cluster_7372	Pocillopora_meandrina_HIv1___Sc0000044	1219142	1219556	415	87	44	0.0	-	UAUUGAAAAUGAUUUUGGAAUGGAUCCA	15	0	87	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1474411-1474830	Cluster_7373	Pocillopora_meandrina_HIv1___Sc0000044	1474411	1474830	420	5847	89	0.0023943902856165553	-	AACUUUUGACGGUGG	2592	5844	1	2	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1500329-1500759	Cluster_7374	Pocillopora_meandrina_HIv1___Sc0000044	1500329	1500759	431	271	71	0.01845018450184502	-	UGUUACGUCGUGGUAGUCUUCCGAUGAGGC	43	3	261	0	6	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1521004-1521419	Cluster_7375	Pocillopora_meandrina_HIv1___Sc0000044	1521004	1521419	416	2283	22	0.0	-	UCUGGAGUCUCGGCA	1098	2282	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1602650-1603065	Cluster_7376	Pocillopora_meandrina_HIv1___Sc0000044	1602650	1603065	416	194	19	0.005154639175257732	-	CCUUUCCGAGGUCGA	77	189	5	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1605931-1606361	Cluster_7377	Pocillopora_meandrina_HIv1___Sc0000044	1605931	1606361	431	333	154	0.04804804804804805	-	UGAUAACUGUACUCUUGAAAUUCAUCGA	20	3	317	3	2	1	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1606377-1606804	Cluster_7378	Pocillopora_meandrina_HIv1___Sc0000044	1606377	1606804	428	235	126	0.10638297872340426	-	UACUGAUAGUGAAACUGCUCCUUGAACC	16	4	218	2	3	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1609462-1609889	Cluster_7379	Pocillopora_meandrina_HIv1___Sc0000044	1609462	1609889	428	95	25	0.0	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	28	0	93	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1619074-1620250	Cluster_7380	Pocillopora_meandrina_HIv1___Sc0000044	1619074	1620250	1177	1786	698	0.05263157894736842	-	UGAUUCUGACGCUUUAUUCCCCUGGAGA	98	29	1661	8	8	33	47	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1620562-1621137	Cluster_7381	Pocillopora_meandrina_HIv1___Sc0000044	1620562	1621137	576	464	279	0.06896551724137931	-	UCUUUCGGUUACUUCCAUCUGGUGAUAAGC	17	3	442	1	2	7	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1621261-1621668	Cluster_7382	Pocillopora_meandrina_HIv1___Sc0000044	1621261	1621668	408	124	69	0.11290322580645161	-	UGUAAUCAUACGCUUAGCCUCAGUGAACGCU	12	0	113	2	1	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1621743-1622169	Cluster_7383	Pocillopora_meandrina_HIv1___Sc0000044	1621743	1622169	427	291	147	0.061855670103092786	-	UAGGUAAUGGCACAAACUGAGAGGCGU	27	3	274	3	0	4	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000044:1640463-1640962	Cluster_7384	Pocillopora_meandrina_HIv1___Sc0000044	1640463	1640962	500	192	86	0.020833333333333332	-	UGUACGUUGACUCUACUGACUUGAGACCUC	20	2	189	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:182705-183335	Cluster_7385	Pocillopora_meandrina_HIv1___Sc0000045	182705	183335	631	185	67	0.05945945945945946	-	UAUUUGCACCGUUUUUCUUGAAUAUAGA	17	2	176	1	2	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:184675-185342	Cluster_7386	Pocillopora_meandrina_HIv1___Sc0000045	184675	185342	668	635	242	0.10393700787401575	-	UUGGUAUCAUCUCCGAGGCUGUUGUAUC	95	8	589	4	6	10	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:234132-234611	Cluster_7387	Pocillopora_meandrina_HIv1___Sc0000045	234132	234611	480	2077	227	0.9942224362060664	+	CAACAAAUCAAACUUAGAGGCUCUUCAGC	303	11	2015	11	4	8	28	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:284932-285360	Cluster_7388	Pocillopora_meandrina_HIv1___Sc0000045	284932	285360	429	7631	129	0.0	-	AUUGCAAGCAAACGGCUAGGAGUCUUCU	3324	14	7550	3	6	5	53	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:294530-294958	Cluster_7389	Pocillopora_meandrina_HIv1___Sc0000045	294530	294958	429	508	146	0.9291338582677166	+	UGUAGAAUCAAUCUGUUACUAAGACACC	109	3	466	15	1	13	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:295038-295522	Cluster_7390	Pocillopora_meandrina_HIv1___Sc0000045	295038	295522	485	256	151	0.859375	+	UUGGAUAACAUGUGAUCAUCAAGUGAGU	10	6	215	6	2	3	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:295749-296149	Cluster_7391	Pocillopora_meandrina_HIv1___Sc0000045	295749	296149	401	180	124	0.7888888888888889	.	UGAUUUCGGUAUUGAUCCAGGGAAGUG	6	2	160	1	3	4	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:296725-297264	Cluster_7392	Pocillopora_meandrina_HIv1___Sc0000045	296725	297264	540	538	211	0.7509293680297398	.	UGUAUUCACUUGGGUUAACUCUUCCACA	87	0	514	1	5	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:351507-351935	Cluster_7393	Pocillopora_meandrina_HIv1___Sc0000045	351507	351935	429	101	29	0.0891089108910891	-	UGUAUCUUCAGAGGAUUUCGGAUCGCUCA	62	2	96	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:631941-632357	Cluster_7394	Pocillopora_meandrina_HIv1___Sc0000045	631941	632357	417	160	14	0.025	-	AGAUUUGGGAGUGCUCA	49	157	2	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:656589-657002	Cluster_7395	Pocillopora_meandrina_HIv1___Sc0000045	656589	657002	414	98	35	0.8571428571428571	+	CUUUCCGAGGUCUCG	15	86	5	0	2	4	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:791112-791534	Cluster_7396	Pocillopora_meandrina_HIv1___Sc0000045	791112	791534	423	119	31	0.0	-	UAACAUGAAGAUAUGAAAUUCCUA	42	5	9	1	0	52	52	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:792311-792733	Cluster_7397	Pocillopora_meandrina_HIv1___Sc0000045	792311	792733	423	252	25	0.0	-	UAACAUGAAGACGUUGAAUUUCU	106	39	7	11	59	106	30	23	N	NA
Pocillopora_meandrina_HIv1___Sc0000045:826502-826931	Cluster_7398	Pocillopora_meandrina_HIv1___Sc0000045	826502	826931	430	106	28	0.018867924528301886	-	UGAGAAUCUUGUGAAAUGGUGAUGAACCUGC	37	0	101	0	3	2	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:219132-220447	Cluster_7399	Pocillopora_meandrina_HIv1___Sc0000046	219132	220447	1316	12180	1167	0.9944991789819376	+	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUGG	3713	118	11849	62	25	49	77	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:222590-223018	Cluster_7400	Pocillopora_meandrina_HIv1___Sc0000046	222590	223018	429	246	90	0.991869918699187	+	UGAACUGUCUGCUGCUGAUGAUGAUGAGC	87	21	211	1	7	3	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:223387-223816	Cluster_7401	Pocillopora_meandrina_HIv1___Sc0000046	223387	223816	430	225	103	1.0	+	UUGGAUAAUGCUGACAACUUGGGCAAUACC	38	5	210	0	1	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:231177-231604	Cluster_7402	Pocillopora_meandrina_HIv1___Sc0000046	231177	231604	428	250	95	0.988	+	UAAGUUCACUGAAAAGGUCUAGACGUUCAAG	28	11	235	2	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:235152-235718	Cluster_7403	Pocillopora_meandrina_HIv1___Sc0000046	235152	235718	567	590	205	0.9847457627118644	+	UGUAUGCUGUUUGUUGGACGUUGCUGAUA	91	23	531	9	11	5	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:241311-241886	Cluster_7404	Pocillopora_meandrina_HIv1___Sc0000046	241311	241886	576	328	148	0.9969512195121951	+	UGAAGACGGUGAUAAACGAAUUUAUUCUGU	64	14	308	1	1	1	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:242202-242741	Cluster_7405	Pocillopora_meandrina_HIv1___Sc0000046	242202	242741	540	774	263	0.9987080103359173	+	UGAAACUAGCCUCUGGAUGUAAAGGAC	34	11	707	3	22	10	21	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:244759-245625	Cluster_7406	Pocillopora_meandrina_HIv1___Sc0000046	244759	245625	867	2288	386	0.8872377622377622	+	UCCACAUGGAUUCUUAACCCAGCAAUAGACC	317	65	2127	14	13	25	44	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:246193-247173	Cluster_7407	Pocillopora_meandrina_HIv1___Sc0000046	246193	247173	981	9899	1294	0.9788867562380038	+	UAGGAGCUGAAUAACUCAGAAUUGAGC	1377	75	9468	24	47	96	189	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:248155-248584	Cluster_7408	Pocillopora_meandrina_HIv1___Sc0000046	248155	248584	430	233	84	1.0	+	UGCCUCAAUUAUUUGUUUCCACUGUUGAUC	100	0	228	0	2	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:254125-254646	Cluster_7409	Pocillopora_meandrina_HIv1___Sc0000046	254125	254646	522	3294	329	0.99210686095932	+	UGCACUCUGCCAAUUUCUCGUUCAAUUCG	1140	44	3142	11	17	50	30	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:254949-255374	Cluster_7410	Pocillopora_meandrina_HIv1___Sc0000046	254949	255374	426	132	59	1.0	+	UUUUUAAAAUAAGACUCUCGGAAAUGCGUU	17	2	127	0	0	0	3	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:256240-256670	Cluster_7411	Pocillopora_meandrina_HIv1___Sc0000046	256240	256670	431	420	176	1.0	+	UGAUAGAUCUCUAAGAAACUCGGUGACUGG	55	7	394	2	8	3	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:257445-258204	Cluster_7412	Pocillopora_meandrina_HIv1___Sc0000046	257445	258204	760	435	184	0.9954022988505747	+	UGGGUGUAGUGCUGAAUACUGCAGCAUU	91	11	411	0	2	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:261258-262127	Cluster_7413	Pocillopora_meandrina_HIv1___Sc0000046	261258	262127	870	6557	670	0.95928015860912	+	UGACCUAAAAUGUAGUGAACAGACUUUU	958	187	5767	51	91	148	313	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:263491-263913	Cluster_7414	Pocillopora_meandrina_HIv1___Sc0000046	263491	263913	423	195	79	0.9948717948717949	+	UAUUGACUUUGGUCCUUGUAUGAGGGAGA	30	2	191	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:265288-265716	Cluster_7415	Pocillopora_meandrina_HIv1___Sc0000046	265288	265716	429	397	128	0.9974811083123426	+	UUCAUUCUCUAAACAUCUUUCUCUGUUU	83	7	387	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:266491-266920	Cluster_7416	Pocillopora_meandrina_HIv1___Sc0000046	266491	266920	430	222	81	0.9864864864864865	+	UGUGUAGAAGUUGUCCACAUAGAGAAGAUG	67	7	213	0	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:269962-270503	Cluster_7417	Pocillopora_meandrina_HIv1___Sc0000046	269962	270503	542	388	147	0.9948453608247423	+	UGAUGUUGCUGUUCUGGCUUUUCCAAGU	28	9	372	2	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:277576-278003	Cluster_7418	Pocillopora_meandrina_HIv1___Sc0000046	277576	278003	428	303	125	0.9900990099009901	+	UGGUUAUCUGCAAUUUGUGUCAAAAUAUGU	34	7	290	3	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:278266-279149	Cluster_7419	Pocillopora_meandrina_HIv1___Sc0000046	278266	279149	884	1022	342	0.9921722113502935	+	UUGGCAUUAAUUUUUGAACGGUUGGAACACC	72	18	971	1	11	10	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:280871-281697	Cluster_7420	Pocillopora_meandrina_HIv1___Sc0000046	280871	281697	827	407	146	0.8771498771498771	+	UUGGUUGAUUAUUAUAUCUCUAUGGGGC	29	9	365	7	2	13	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:290983-291409	Cluster_7421	Pocillopora_meandrina_HIv1___Sc0000046	290983	291409	427	120	51	0.975	+	UCUGCCUCAUUUAAGAACUCUAGCCCAAGG	19	0	110	2	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:293251-293666	Cluster_7422	Pocillopora_meandrina_HIv1___Sc0000046	293251	293666	416	177	96	0.9943502824858758	+	UCUAACCAUCUGAAUGAGAGCCAUCGCAUC	15	2	171	3	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:307283-309048	Cluster_7423	Pocillopora_meandrina_HIv1___Sc0000046	307283	309048	1766	14496	1597	0.8030491169977925	+	UAUAGAUGUAGCUCUUGGUAUGUGCCA	1767	108	12698	55	178	590	867	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:309717-310136	Cluster_7424	Pocillopora_meandrina_HIv1___Sc0000046	309717	310136	420	168	83	0.9166666666666666	+	UAGCCUUCUCUGAAAAACUUGUAAAUCUUC	15	2	156	0	2	4	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:311089-311636	Cluster_7425	Pocillopora_meandrina_HIv1___Sc0000046	311089	311636	548	1379	261	0.9949238578680203	+	UGUGAAUUUACUGACCAUCUCGACAUUGGUA	176	9	1342	4	10	5	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:319682-320119	Cluster_7426	Pocillopora_meandrina_HIv1___Sc0000046	319682	320119	438	316	115	0.939873417721519	+	UACGUGUAGAAAGCCUUCUCUGACAUCAAC	24	2	295	2	1	9	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:321062-322200	Cluster_7427	Pocillopora_meandrina_HIv1___Sc0000046	321062	322200	1139	4559	1120	0.9550339986839219	+	UUAGUAACUCAGCUCUCAUUGUGCCAUC	199	87	4356	7	18	34	57	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:330775-331193	Cluster_7428	Pocillopora_meandrina_HIv1___Sc0000046	330775	331193	419	135	49	0.9925925925925926	+	UCUUGUAACCGUGAUAGCUCAGGCUGACU	21	2	133	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:331848-332267	Cluster_7429	Pocillopora_meandrina_HIv1___Sc0000046	331848	332267	420	98	48	0.9897959183673469	+	UUCUGAAGGAGCUUAGAAACCAGACUAAA	7	4	92	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:332705-333133	Cluster_7430	Pocillopora_meandrina_HIv1___Sc0000046	332705	333133	429	333	135	0.990990990990991	+	UGUGAAAUAGUGUCUGAUACAAGAAGGUC	29	7	300	8	8	0	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:336248-337540	Cluster_7431	Pocillopora_meandrina_HIv1___Sc0000046	336248	337540	1293	13574	1319	0.9734787092971858	+	UAGAGUGGAUGCAUUCUGAUCUUUACCA	1628	83	13154	35	25	70	207	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:344906-345663	Cluster_7432	Pocillopora_meandrina_HIv1___Sc0000046	344906	345663	758	444	241	0.06306306306306306	-	UGAAUGAUGUUGUCGAGUAGAUUGAGAGU	21	14	403	2	8	5	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:353960-354387	Cluster_7433	Pocillopora_meandrina_HIv1___Sc0000046	353960	354387	428	217	31	1.0	+	UAAAGCUUGGGGUAAUAGAUUUCUGUCU	55	0	216	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:363046-363474	Cluster_7434	Pocillopora_meandrina_HIv1___Sc0000046	363046	363474	429	189	48	0.9470899470899471	+	UGGAAAACCAUCUUGAACCGCUUAAAGCA	73	1	179	0	2	6	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:402469-402899	Cluster_7435	Pocillopora_meandrina_HIv1___Sc0000046	402469	402899	431	564	78	0.9946808510638298	+	UGCAUACUGUUUGCUCUUGAAUUUCAUCA	269	1	560	0	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:403067-403650	Cluster_7436	Pocillopora_meandrina_HIv1___Sc0000046	403067	403650	584	285	143	0.8736842105263158	+	UAGGAACGCUUUGAAUUUCUCUGAGACA	15	11	251	1	0	10	12	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:404017-405217	Cluster_7437	Pocillopora_meandrina_HIv1___Sc0000046	404017	405217	1201	7511	1032	0.9394221808014911	+	UGAAGAACUUGAUCGAUUACAUGUUGAUA	3337	38	7254	19	29	48	123	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:405422-406023	Cluster_7438	Pocillopora_meandrina_HIv1___Sc0000046	405422	406023	602	436	223	0.8348623853211009	+	UAAGACCGUAUGGACCUGUUUUCUGACUGGC	32	11	388	5	5	7	20	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:410127-410555	Cluster_7439	Pocillopora_meandrina_HIv1___Sc0000046	410127	410555	429	140	52	1.0	+	UGAAUUCUUGAAUACUGCUUUGGGUCAGCA	29	0	139	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:411343-411770	Cluster_7440	Pocillopora_meandrina_HIv1___Sc0000046	411343	411770	428	313	67	0.9968051118210862	+	UUAUUUCCAUUUCUGCAUGAGUUUGAGC	198	2	310	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:419043-419455	Cluster_7441	Pocillopora_meandrina_HIv1___Sc0000046	419043	419455	413	117	34	0.9572649572649573	+	UCUGUCUAGUGUUCCACCUUCUGUACAUU	29	29	82	2	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:426261-426690	Cluster_7442	Pocillopora_meandrina_HIv1___Sc0000046	426261	426690	430	184	57	0.9945652173913043	+	UGUGUUAGGACAUUAAUAUACCAAAGGUUC	76	5	162	2	1	1	13	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:439425-439855	Cluster_7443	Pocillopora_meandrina_HIv1___Sc0000046	439425	439855	431	411	81	0.9294403892944039	+	CAACAAUCGUGAAAUUGCUCGUGAAUAUGGC	159	32	372	0	2	1	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:440926-441351	Cluster_7444	Pocillopora_meandrina_HIv1___Sc0000046	440926	441351	426	116	36	0.9827586206896551	+	UGUUACUCUCAGAUCUUGGCAGACGCCU	22	6	109	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:453177-453577	Cluster_7445	Pocillopora_meandrina_HIv1___Sc0000046	453177	453577	401	191	110	0.9895287958115183	+	UGUGACUGAGGCUUGUUUUGAUAACUC	9	10	169	1	0	6	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:459439-459856	Cluster_7446	Pocillopora_meandrina_HIv1___Sc0000046	459439	459856	418	113	42	0.9823008849557522	+	UUGGCACGUGUCCAUCUUUGAUUUCUGA	20	2	110	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:464183-464610	Cluster_7447	Pocillopora_meandrina_HIv1___Sc0000046	464183	464610	428	196	61	0.2857142857142857	.	UAUCUGAGCAUUUCAUAACAAUGUAACUUC	55	1	181	0	1	7	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:527203-527726	Cluster_7448	Pocillopora_meandrina_HIv1___Sc0000046	527203	527726	524	984	121	0.12195121951219512	-	UGAUUGGUGCAUUUCGAUCCUUGCUGU	211	3	969	0	0	3	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:559489-559905	Cluster_7449	Pocillopora_meandrina_HIv1___Sc0000046	559489	559905	417	99	10	0.98989898989899	+	UUUGACAACUUUUGACA	86	98	0	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:600960-601376	Cluster_7450	Pocillopora_meandrina_HIv1___Sc0000046	600960	601376	417	134	25	1.0	+	GACGACGUCAGAGAGU	40	132	2	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:657920-658503	Cluster_7451	Pocillopora_meandrina_HIv1___Sc0000046	657920	658503	584	831	270	0.01684717208182912	-	UGACUGACUGUGCUUGUGUACGAUACA	74	4	809	2	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000046:658899-659487	Cluster_7452	Pocillopora_meandrina_HIv1___Sc0000046	658899	659487	589	227	116	0.04405286343612335	-	UGUGUAGAUAUGUCUUUUGGACAGGA	25	5	216	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000049:27861-28457	Cluster_7453	Pocillopora_meandrina_HIv1___Sc0000049	27861	28457	597	5625	527	0.9953777777777778	+	UGAUGACUCUUUUCUAUUCUGACGAAGUUU	818	21	5546	6	5	14	33	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000049:29959-30388	Cluster_7454	Pocillopora_meandrina_HIv1___Sc0000049	29959	30388	430	328	56	1.0	+	UCAAUAUGGUUUUCGUAAACAUGCUUUGCC	145	3	324	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:92873-93301	Cluster_7455	Pocillopora_meandrina_HIv1___Sc0000051	92873	93301	429	95	13	0.9894736842105263	+	UGUUUACGGGUGACUGAAGAAGAACUGGU	66	1	93	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:130035-130442	Cluster_7456	Pocillopora_meandrina_HIv1___Sc0000051	130035	130442	408	120	61	0.8	+	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	10	2	113	0	0	3	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000051:159395-159820	Cluster_7457	Pocillopora_meandrina_HIv1___Sc0000051	159395	159820	426	145	69	0.8620689655172413	+	UAUUUCUUGCUGUAGAGAUUGAGACUCGUU	21	3	137	1	2	0	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000053:33888-34304	Cluster_7458	Pocillopora_meandrina_HIv1___Sc0000053	33888	34304	417	1087	25	1.0	+	CGGCAUGAAAAAAAA	446	1087	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000054:83625-84040	Cluster_7459	Pocillopora_meandrina_HIv1___Sc0000054	83625	84040	416	82	9	1.0	+	UGAAAAUCUUUGCUCA	71	80	1	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:3818-4246	Cluster_7460	Pocillopora_meandrina_HIv1___Sc0000055	3818	4246	429	384	43	0.0	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	292	0	378	0	0	4	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:22288-22718	Cluster_7461	Pocillopora_meandrina_HIv1___Sc0000055	22288	22718	431	409	123	0.9388753056234719	+	UGACUGUUGACCACCAAGAUUUGGAUC	60	22	329	2	22	18	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:55728-56159	Cluster_7462	Pocillopora_meandrina_HIv1___Sc0000055	55728	56159	432	1922	53	0.9713839750260146	+	UAAAAUCCGAAAAAUUCGAAAUGGAAGGCUG	1458	8	1862	3	0	14	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000055:111446-111876	Cluster_7463	Pocillopora_meandrina_HIv1___Sc0000055	111446	111876	431	305	133	0.1180327868852459	-	UGCAACACGAUCUGACAGAUAUCAGCUGAUC	61	10	274	2	1	7	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000057:62935-63401	Cluster_7464	Pocillopora_meandrina_HIv1___Sc0000057	62935	63401	467	319	126	0.8213166144200627	+	AUAUAUCCUAUACGCAUCUGAUAACAUUUUC	32	36	233	6	15	11	18	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:105-512	Cluster_7465	Pocillopora_meandrina_HIv1___Sc0000061	105	512	408	154	108	0.9935064935064936	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	43	70	6	13	8	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:1689-2114	Cluster_7466	Pocillopora_meandrina_HIv1___Sc0000061	1689	2114	426	531	169	0.0	-	CCCCGUGUUGUAGGCUU	41	321	121	9	14	42	24	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:2315-2731	Cluster_7467	Pocillopora_meandrina_HIv1___Sc0000061	2315	2731	417	256	147	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	19	88	102	10	20	23	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:3907-4329	Cluster_7468	Pocillopora_meandrina_HIv1___Sc0000061	3907	4329	423	196	88	0.00510204081632653	-	CCCCGUGUUGUAGGCUU	16	105	55	3	10	12	11	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:11377-11803	Cluster_7469	Pocillopora_meandrina_HIv1___Sc0000061	11377	11803	427	752	198	0.0	-	CCGUGUUGUAGGCUU	65	411	185	13	22	72	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:12009-12419	Cluster_7470	Pocillopora_meandrina_HIv1___Sc0000061	12009	12419	411	233	144	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	17	69	104	9	14	21	16	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:13595-14020	Cluster_7471	Pocillopora_meandrina_HIv1___Sc0000061	13595	14020	426	732	191	0.0	-	CCCCGUGUUGUAGGCUU	65	433	165	13	34	50	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:14227-14637	Cluster_7472	Pocillopora_meandrina_HIv1___Sc0000061	14227	14637	411	244	146	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	16	85	104	10	12	21	12	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:15813-16238	Cluster_7473	Pocillopora_meandrina_HIv1___Sc0000061	15813	16238	426	734	186	0.0	-	CCCCGUGUUGUAGGCUU	69	412	188	21	31	44	38	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:16445-16883	Cluster_7474	Pocillopora_meandrina_HIv1___Sc0000061	16445	16883	439	255	155	1.0	+	CAAGUGUAGUAUCUGUUCUUAU	8	91	98	19	24	14	9	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:18031-18456	Cluster_7475	Pocillopora_meandrina_HIv1___Sc0000061	18031	18456	426	683	203	0.0	-	CCCCGUGUUGUAGGCUU	49	384	145	22	26	67	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:18663-19105	Cluster_7476	Pocillopora_meandrina_HIv1___Sc0000061	18663	19105	443	266	172	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	100	116	17	11	11	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:20249-20674	Cluster_7477	Pocillopora_meandrina_HIv1___Sc0000061	20249	20674	426	774	215	0.0	-	CCCCGUGUUGUAGGCUU	76	433	195	14	28	64	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:20881-21322	Cluster_7478	Pocillopora_meandrina_HIv1___Sc0000061	20881	21322	442	252	158	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	87	115	16	12	14	8	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:22467-22892	Cluster_7479	Pocillopora_meandrina_HIv1___Sc0000061	22467	22892	426	740	195	0.0	-	CCCCGUGUUGUAGGCUU	62	396	191	11	28	72	42	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:23099-23539	Cluster_7480	Pocillopora_meandrina_HIv1___Sc0000061	23099	23539	441	249	145	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	81	110	8	19	19	12	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:24685-25111	Cluster_7481	Pocillopora_meandrina_HIv1___Sc0000061	24685	25111	427	707	198	0.002828854314002829	-	CCCCGUGUUGUAGGCUU	63	406	178	18	25	43	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:25317-25753	Cluster_7482	Pocillopora_meandrina_HIv1___Sc0000061	25317	25753	437	250	160	0.996	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	83	114	11	17	18	7	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:26903-27328	Cluster_7483	Pocillopora_meandrina_HIv1___Sc0000061	26903	27328	426	714	187	0.0	-	CCGUGUUGUAGGCUU	65	441	145	19	26	54	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:27535-27945	Cluster_7484	Pocillopora_meandrina_HIv1___Sc0000061	27535	27945	411	237	146	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	83	97	7	12	28	10	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:29121-29546	Cluster_7485	Pocillopora_meandrina_HIv1___Sc0000061	29121	29546	426	620	175	0.0032258064516129032	-	CCGUGUUGUAGGCUU	48	357	147	10	20	46	40	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:29753-30196	Cluster_7486	Pocillopora_meandrina_HIv1___Sc0000061	29753	30196	444	259	162	0.9961389961389961	+	GAUACGCUGCUCAUUGA	11	90	117	11	13	18	10	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:31339-31763	Cluster_7487	Pocillopora_meandrina_HIv1___Sc0000061	31339	31763	425	318	135	0.0	-	CCCCGUGUUGUAGGCUU	22	165	87	8	17	25	16	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:31971-32406	Cluster_7488	Pocillopora_meandrina_HIv1___Sc0000061	31971	32406	436	248	149	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	108	89	10	14	23	4	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:39387-39812	Cluster_7489	Pocillopora_meandrina_HIv1___Sc0000061	39387	39812	426	596	167	0.0	-	CCGUGUUGUAGGCUU	52	350	131	16	22	52	25	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:40056-40456	Cluster_7490	Pocillopora_meandrina_HIv1___Sc0000061	40056	40456	401	192	117	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	74	70	13	12	12	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:41604-42029	Cluster_7491	Pocillopora_meandrina_HIv1___Sc0000061	41604	42029	426	720	176	0.001388888888888889	-	CCCCGUGUUGUAGGCUU	75	415	162	7	34	67	35	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:42236-42673	Cluster_7492	Pocillopora_meandrina_HIv1___Sc0000061	42236	42673	438	232	143	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	19	87	105	7	10	13	10	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:43822-44247	Cluster_7493	Pocillopora_meandrina_HIv1___Sc0000061	43822	44247	426	565	166	0.0	-	CCCCGUGUUGUAGGCUU	55	334	124	15	17	39	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:44454-44864	Cluster_7494	Pocillopora_meandrina_HIv1___Sc0000061	44454	44864	411	237	137	1.0	+	CUCGGCCUUUUGGCUAAGAUCAAGUGUAGUA	10	76	115	10	8	15	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:46041-46464	Cluster_7495	Pocillopora_meandrina_HIv1___Sc0000061	46041	46464	424	257	114	0.0	-	CCGUGUUGUAGGCUU	23	146	68	3	10	16	14	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:46673-47083	Cluster_7496	Pocillopora_meandrina_HIv1___Sc0000061	46673	47083	411	199	129	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	71	83	6	14	16	9	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:54032-54457	Cluster_7497	Pocillopora_meandrina_HIv1___Sc0000061	54032	54457	426	751	193	0.0	-	CCCCGUGUUGUAGGCUU	81	430	184	14	26	46	51	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:54667-55074	Cluster_7498	Pocillopora_meandrina_HIv1___Sc0000061	54667	55074	408	189	122	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	62	77	5	16	13	16	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:56250-56675	Cluster_7499	Pocillopora_meandrina_HIv1___Sc0000061	56250	56675	426	749	200	0.0013351134846461949	-	CCCCGUGUUGUAGGCUU	76	416	183	22	33	46	49	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:56882-57429	Cluster_7500	Pocillopora_meandrina_HIv1___Sc0000061	56882	57429	548	263	164	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	95	107	12	19	13	17	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:58468-58894	Cluster_7501	Pocillopora_meandrina_HIv1___Sc0000061	58468	58894	427	763	187	0.001310615989515072	-	CCCCGUGUUGUAGGCUU	71	443	176	15	34	59	36	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:59100-59647	Cluster_7502	Pocillopora_meandrina_HIv1___Sc0000061	59100	59647	548	267	165	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	12	98	102	14	22	18	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:60686-61111	Cluster_7503	Pocillopora_meandrina_HIv1___Sc0000061	60686	61111	426	742	199	0.0	-	CCCCGUGUUGUAGGCUU	77	424	175	22	20	64	37	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:61315-61754	Cluster_7504	Pocillopora_meandrina_HIv1___Sc0000061	61315	61754	440	260	161	0.9923076923076923	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	86	131	3	12	15	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:62904-63329	Cluster_7505	Pocillopora_meandrina_HIv1___Sc0000061	62904	63329	426	724	208	0.0013812154696132596	-	CCCCGUGUUGUAGGCUU	72	396	193	16	27	53	39	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:63536-63946	Cluster_7506	Pocillopora_meandrina_HIv1___Sc0000061	63536	63946	411	256	137	0.99609375	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	18	89	101	18	17	20	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:65122-65547	Cluster_7507	Pocillopora_meandrina_HIv1___Sc0000061	65122	65547	426	613	188	0.0	-	CCGUGUUGUAGGCUU	45	356	145	12	23	48	29	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000061:65754-66164	Cluster_7508	Pocillopora_meandrina_HIv1___Sc0000061	65754	66164	411	253	164	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	101	99	6	16	18	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___Sc0000061:67340-67762	Cluster_7509	Pocillopora_meandrina_HIv1___Sc0000061	67340	67762	423	210	88	0.004761904761904762	-	CCCCGUGUUGUAGGCUU	21	114	45	3	13	18	17	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000066:51411-51838	Cluster_7510	Pocillopora_meandrina_HIv1___Sc0000066	51411	51838	428	169	64	0.9526627218934911	+	UGAGAUUUCACAAUGGAUAAGUAGAGUG	54	0	159	1	0	2	7	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000067:40407-41365	Cluster_7511	Pocillopora_meandrina_HIv1___Sc0000067	40407	41365	959	1310	228	0.9793893129770992	+	UUGAAACGUGUUGCUGAACGCUUGUUGU	335	9	1274	3	3	15	6	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000067:64340-64947	Cluster_7512	Pocillopora_meandrina_HIv1___Sc0000067	64340	64947	608	4592	356	0.09538327526132404	-	UCCGGUGUAAAAUAAAACAGAAGCAUU	1458	81	3787	382	38	40	264	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000069:14374-16111	Cluster_7513	Pocillopora_meandrina_HIv1___Sc0000069	14374	16111	1738	2752	1133	0.9549418604651163	+	UGAGACCGUUGAUGAUAGCAUCACUAUC	92	21	2613	9	20	44	45	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:5099-5514	Cluster_7514	Pocillopora_meandrina_HIv1___Sc0000070	5099	5514	416	153	2	1.0	+	CGCGGGAUAGAGCAGU	141	153	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:15938-16353	Cluster_7515	Pocillopora_meandrina_HIv1___Sc0000070	15938	16353	416	169	4	1.0	+	CGCGGGAUAGAGCAGU	145	169	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:26777-27192	Cluster_7516	Pocillopora_meandrina_HIv1___Sc0000070	26777	27192	416	170	3	1.0	+	CGCGGGAUAGAGCAGU	154	170	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:37616-38031	Cluster_7517	Pocillopora_meandrina_HIv1___Sc0000070	37616	38031	416	162	3	1.0	+	CGCGGGAUAGAGCAGU	151	162	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000070:48455-48870	Cluster_7518	Pocillopora_meandrina_HIv1___Sc0000070	48455	48870	416	148	4	0.9932432432432432	+	CGCGGGAUAGAGCAGU	138	148	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:28307-29023	Cluster_7519	Pocillopora_meandrina_HIv1___Sc0000077	28307	29023	717	384	201	0.078125	-	UGUGAGUUAUGUGACCCUGAACAGCGGU	30	4	355	5	2	9	9	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:31166-31695	Cluster_7520	Pocillopora_meandrina_HIv1___Sc0000077	31166	31695	530	525	209	0.017142857142857144	-	UGUAAAUUUCCUAAAGGUUUCAGACGUGAAC	38	2	514	0	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000077:31816-32245	Cluster_7521	Pocillopora_meandrina_HIv1___Sc0000077	31816	32245	430	578	121	0.012110726643598616	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	145	1	567	2	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:617-1028	Cluster_7522	Pocillopora_meandrina_HIv1___Sc0000080	617	1028	412	182	101	0.03296703296703297	-	UUGUCUUGUUUCUGUUCUGACCCGAACA	16	2	176	1	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___Sc0000080:14588-15008	Cluster_7523	Pocillopora_meandrina_HIv1___Sc0000080	14588	15008	421	117	35	0.017094017094017096	-	UCAAAACCUUGUUGGCUGUAUUCUCUCAUC	40	0	112	1	4	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:19971-20587	Cluster_7524	Pocillopora_meandrina_HIv1___xfSc0000000	19971	20587	617	331	120	0.9214501510574018	+	UGUACUCUUUCUAUUUUCCUUCGUUCCUGGG	52	9	313	3	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:261113-261577	Cluster_7525	Pocillopora_meandrina_HIv1___xfSc0000000	261113	261577	465	221	85	0.995475113122172	+	GACGGACUGAGGAAGCA	29	81	96	3	15	11	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:369300-369822	Cluster_7526	Pocillopora_meandrina_HIv1___xfSc0000000	369300	369822	523	1857	181	0.9940764674205708	+	UGUGUGUUUGGCUGGAGCAUCUGCGGCUA	222	28	1779	15	12	3	20	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:375425-375956	Cluster_7527	Pocillopora_meandrina_HIv1___xfSc0000000	375425	375956	532	769	199	0.06762028608582575	-	UUUGAUAUAAAGGUUGUGGAAAAACAGU	77	35	694	4	1	16	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:528923-529339	Cluster_7528	Pocillopora_meandrina_HIv1___xfSc0000000	528923	529339	417	112	41	0.9910714285714286	+	GACGGACUGAGGAAGCA	39	83	11	2	5	8	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:587017-587443	Cluster_7529	Pocillopora_meandrina_HIv1___xfSc0000000	587017	587443	427	154	81	0.9155844155844156	+	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	14	1	146	1	0	5	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:588528-588954	Cluster_7530	Pocillopora_meandrina_HIv1___xfSc0000000	588528	588954	427	136	74	0.8455882352941176	+	UGUAUUGAUUGAACUUGUCGGUUGACC	13	2	118	0	1	11	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:598004-598432	Cluster_7531	Pocillopora_meandrina_HIv1___xfSc0000000	598004	598432	429	157	30	0.006369426751592357	-	AUUUCGAUCAGGUGCUGUGCGGCAUGGAU	80	0	147	1	0	4	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:651583-652001	Cluster_7532	Pocillopora_meandrina_HIv1___xfSc0000000	651583	652001	419	122	7	0.02459016393442623	-	UUAUGUUUUGGCUUGUUUU	107	121	1	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:659750-660261	Cluster_7533	Pocillopora_meandrina_HIv1___xfSc0000000	659750	660261	512	398	144	0.9346733668341709	+	UAAGAUUCCAAGAUAUUUAAAACAAGU	30	2	363	1	3	6	23	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:695933-696402	Cluster_7534	Pocillopora_meandrina_HIv1___xfSc0000000	695933	696402	470	410	173	0.9097560975609756	+	UCUGUACUAGAGCAAGAACAAGGUUUU	29	3	366	2	2	3	34	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:696415-696842	Cluster_7535	Pocillopora_meandrina_HIv1___xfSc0000000	696415	696842	428	216	119	0.9074074074074074	+	UGUUCUUGUAGUCUUUUAACAGCUUGUU	24	2	208	0	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:814459-815103	Cluster_7536	Pocillopora_meandrina_HIv1___xfSc0000000	814459	815103	645	576	277	0.1996527777777778	-	UGUGUCAGAUGCGUUUCAGAAAUGGUU	91	6	517	14	2	11	26	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:815254-815909	Cluster_7537	Pocillopora_meandrina_HIv1___xfSc0000000	815254	815909	656	637	324	0.38304552590266877	.	UUAUAUCUCUUAUUCAUCUCUUUCCGG	28	11	560	3	9	25	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:816129-816786	Cluster_7538	Pocillopora_meandrina_HIv1___xfSc0000000	816129	816786	658	1105	318	0.08597285067873303	-	UCAAUUAUGUUGCAGAUCUGGCUUUCGAGC	98	4	1045	5	3	25	23	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:817024-817450	Cluster_7539	Pocillopora_meandrina_HIv1___xfSc0000000	817024	817450	427	252	155	0.14285714285714285	-	UGAGUCGAGGUUAUUCACAAUACGAGC	34	11	222	1	2	4	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:874344-874760	Cluster_7540	Pocillopora_meandrina_HIv1___xfSc0000000	874344	874760	417	103	47	1.0	+	GACGGACUGAGGAAGCA	32	62	12	12	7	5	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1150152-1150567	Cluster_7541	Pocillopora_meandrina_HIv1___xfSc0000000	1150152	1150567	416	236	12	0.00423728813559322	-	GCGGGUAUAGCUCAGU	161	236	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1384891-1385321	Cluster_7542	Pocillopora_meandrina_HIv1___xfSc0000000	1384891	1385321	431	333	79	0.07507507507507508	-	UUAAACCGACUCACAGUCCGAUUCGAAU	106	1	316	3	0	7	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1437925-1438366	Cluster_7543	Pocillopora_meandrina_HIv1___xfSc0000000	1437925	1438366	442	384	206	0.84375	+	UACUCUUUCGAGUUUCGUGUUACUGUUGGG	23	10	351	0	7	7	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000000:1596809-1597223	Cluster_7544	Pocillopora_meandrina_HIv1___xfSc0000000	1596809	1597223	415	90	18	0.7777777777777778	.	CUUCAUUCUGAUCUAUUGUUACAGUUACAAC	38	0	86	1	1	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:43913-44382	Cluster_7545	Pocillopora_meandrina_HIv1___xfSc0000001	43913	44382	470	5313	331	0.13739883305100697	-	UGAUCUGCGCAUAGGAAUUGCCCUGGAC	2027	19	5040	7	26	65	156	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:44951-45375	Cluster_7546	Pocillopora_meandrina_HIv1___xfSc0000001	44951	45375	425	214	70	0.7990654205607477	.	AUGUAGAGUGUCUUUAAGGUCAAUA	29	5	171	2	1	7	28	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:45557-45985	Cluster_7547	Pocillopora_meandrina_HIv1___xfSc0000001	45557	45985	429	143	26	0.8671328671328671	+	AUUGUUUGGAUGUGUCCGCAAAUGCAGUG	50	1	140	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:316338-317779	Cluster_7548	Pocillopora_meandrina_HIv1___xfSc0000001	316338	317779	1442	7916	1253	0.8974229408792319	+	UGCGCAAUCGUGAUCAAAAAUAUCCUCAGA	734	45	7596	33	28	105	109	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:356794-357210	Cluster_7549	Pocillopora_meandrina_HIv1___xfSc0000001	356794	357210	417	578	11	0.9982698961937716	+	UUUUAUACUCACAUCCU	291	578	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:422317-423401	Cluster_7550	Pocillopora_meandrina_HIv1___xfSc0000001	422317	423401	1085	614	160	0.7166123778501629	.	AUUGUUUGGAUGUGUCUGCAAAUGCAGUGC	48	54	499	2	4	27	28	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:433286-433793	Cluster_7551	Pocillopora_meandrina_HIv1___xfSc0000001	433286	433793	508	2440	299	0.9495901639344262	+	UGUUUCACACUUUACUACAUUCCCUGGU	644	46	2304	6	6	26	52	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:441381-441790	Cluster_7552	Pocillopora_meandrina_HIv1___xfSc0000001	441381	441790	410	102	48	0.049019607843137254	-	UACUCUCCUCUUGAGCUGCUCGGAUAUCAGC	33	3	89	1	1	7	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:487276-487691	Cluster_7553	Pocillopora_meandrina_HIv1___xfSc0000001	487276	487691	416	119	5	1.0	+	CCGGACCUCAGAUCCG	81	119	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:573788-574197	Cluster_7554	Pocillopora_meandrina_HIv1___xfSc0000001	573788	574197	410	104	49	0.9038461538461539	+	CCGUGUCUUAAGAAACAAAGUUGU	15	1	77	0	0	3	23	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:614071-614499	Cluster_7555	Pocillopora_meandrina_HIv1___xfSc0000001	614071	614499	429	94	35	0.9787234042553191	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	34	0	94	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:655377-655786	Cluster_7556	Pocillopora_meandrina_HIv1___xfSc0000001	655377	655786	410	142	68	0.47183098591549294	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	23	3	129	2	0	3	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1021545-1021972	Cluster_7557	Pocillopora_meandrina_HIv1___xfSc0000001	1021545	1021972	428	95	35	0.9368421052631579	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	33	0	93	0	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1062411-1062820	Cluster_7558	Pocillopora_meandrina_HIv1___xfSc0000001	1062411	1062820	410	144	60	0.4097222222222222	.	UGAAACGAAUUUAAUAGGCCAUGUCGAUU	17	3	134	0	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1106692-1108687	Cluster_7559	Pocillopora_meandrina_HIv1___xfSc0000001	1106692	1108687	1996	7854	1559	0.9726254138018844	+	UACUCUUCUGUGCUGUAUUCCAUUUGC	997	44	7576	18	31	68	117	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000001:1108888-1110706	Cluster_7560	Pocillopora_meandrina_HIv1___xfSc0000001	1108888	1110706	1819	2992	1096	0.9107620320855615	+	UAACAUCAGAUUUUCCAGGAACGUUUUGGG	167	32	2803	7	20	45	85	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:168712-169762	Cluster_7561	Pocillopora_meandrina_HIv1___xfSc0000002	168712	169762	1051	2753	553	0.9698510715583001	+	UGAUGUAACCGUGAUCUUUGAAGGCCCGA	414	6	2670	9	5	20	43	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:170249-170886	Cluster_7562	Pocillopora_meandrina_HIv1___xfSc0000002	170249	170886	638	734	247	0.9495912806539509	+	UGUGUCAGAACCCGGCUUGCAUAAGUGA	101	10	691	5	4	19	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:170926-171341	Cluster_7563	Pocillopora_meandrina_HIv1___xfSc0000002	170926	171341	416	226	142	0.6858407079646017	.	UAGACGAAGAAUCCAGUAAACUAACUGUGUU	15	1	205	2	2	3	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:171482-173003	Cluster_7564	Pocillopora_meandrina_HIv1___xfSc0000002	171482	173003	1522	4353	1194	0.8254077647599357	+	UGAAGACUCGAAUACA	213	699	3386	58	24	37	149	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:178167-178586	Cluster_7565	Pocillopora_meandrina_HIv1___xfSc0000002	178167	178586	420	135	64	0.08888888888888889	-	UUAUAAGGAUCUCAAGGCGAAAAAAGGG	42	6	120	4	1	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:303947-304378	Cluster_7566	Pocillopora_meandrina_HIv1___xfSc0000002	303947	304378	432	335	122	0.0029850746268656717	-	UUCUGUAGCAGCCGAUGUCCUGGGAGAUG	30	4	297	8	6	4	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:344026-344439	Cluster_7567	Pocillopora_meandrina_HIv1___xfSc0000002	344026	344439	414	190	101	0.8105263157894737	+	UAUGACGUCUUCAAUUUACUUUAUUUGA	29	20	141	7	4	13	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:344477-344900	Cluster_7568	Pocillopora_meandrina_HIv1___xfSc0000002	344477	344900	424	88	29	0.9318181818181818	+	UUGGAACGUGUUGCUGAACGCUUGCUA	29	1	86	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:444416-444837	Cluster_7569	Pocillopora_meandrina_HIv1___xfSc0000002	444416	444837	422	202	108	0.10396039603960396	-	UCUGUUCGCUUCCGUCGGGUUUUGGGC	30	7	181	0	1	5	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:446681-447730	Cluster_7570	Pocillopora_meandrina_HIv1___xfSc0000002	446681	447730	1050	731	354	0.7852257181942545	.	UGAUCAUAUAUUAUUCUAUCUGGAGA	31	14	672	1	11	17	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:447991-448420	Cluster_7571	Pocillopora_meandrina_HIv1___xfSc0000002	447991	448420	430	570	194	0.8964912280701754	+	UAACGUAGUGGUAUCCAUUGAACAAGUUC	67	10	482	0	3	9	66	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:480374-480796	Cluster_7572	Pocillopora_meandrina_HIv1___xfSc0000002	480374	480796	423	275	129	0.0	-	UGCGUUCUGUCGGUGAUGUGAUUUUACCAC	49	1	268	1	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:482098-482525	Cluster_7573	Pocillopora_meandrina_HIv1___xfSc0000002	482098	482525	428	240	132	0.004166666666666667	-	UCGGUCUGGUCGCUCUGGAUGAUGACGC	23	1	226	1	0	7	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:482702-483129	Cluster_7574	Pocillopora_meandrina_HIv1___xfSc0000002	482702	483129	428	314	88	0.0	-	UGGAUUGUCUUCAGUUGGGACGUGAUGC	142	1	305	1	0	1	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:483514-483942	Cluster_7575	Pocillopora_meandrina_HIv1___xfSc0000002	483514	483942	429	5024	272	0.0	-	UCUGGUCAGGCUGCAAGCAUACAACACC	3143	18	4974	4	16	5	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:497095-497512	Cluster_7576	Pocillopora_meandrina_HIv1___xfSc0000002	497095	497512	418	112	63	0.9375	+	UCUCUCUGUUUUGGUCUCGCCAUGGAAC	14	0	107	1	1	1	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:498601-499027	Cluster_7577	Pocillopora_meandrina_HIv1___xfSc0000002	498601	499027	427	137	85	0.9051094890510949	+	UGUAUUGAUUGAACUUGUCGGUUGACC	13	0	120	2	6	6	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:500363-500771	Cluster_7578	Pocillopora_meandrina_HIv1___xfSc0000002	500363	500771	409	121	71	0.8429752066115702	+	UGCUUGUGACUUAAGUUGUCGUUCUUCU	11	0	107	0	1	4	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:572733-573153	Cluster_7579	Pocillopora_meandrina_HIv1___xfSc0000002	572733	573153	421	958	28	1.0	+	GACUUGAAGCGGUUGGU	565	958	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:573627-574118	Cluster_7580	Pocillopora_meandrina_HIv1___xfSc0000002	573627	574118	492	614	137	0.011400651465798045	-	UGUUUAUUGUGCGAACUCGACUGCCGCCAC	67	5	605	1	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:574459-574867	Cluster_7581	Pocillopora_meandrina_HIv1___xfSc0000002	574459	574867	409	116	71	0.10344827586206896	-	UGCUUGUGACUUAAGUUGUCGUUCUUCU	9	0	110	0	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:575314-575715	Cluster_7582	Pocillopora_meandrina_HIv1___xfSc0000002	575314	575715	402	137	80	0.10948905109489052	-	UACUGGAAUAAUAACUUUACGAUCAACA	14	2	127	0	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:576221-576625	Cluster_7583	Pocillopora_meandrina_HIv1___xfSc0000002	576221	576625	405	113	62	0.10619469026548672	-	UGUAUUGAUUGAACUUGUCGGUUGACCA	13	0	105	2	1	3	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:577717-578141	Cluster_7584	Pocillopora_meandrina_HIv1___xfSc0000002	577717	578141	425	159	83	0.08176100628930817	-	UGUUUUGGUCUCGCCAUGGAACUCCGGUG	15	1	149	1	0	5	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000002:652776-653204	Cluster_7585	Pocillopora_meandrina_HIv1___xfSc0000002	652776	653204	429	394	41	0.0	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	292	0	391	0	0	2	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:116596-117018	Cluster_7586	Pocillopora_meandrina_HIv1___xfSc0000003	116596	117018	423	88	38	0.9204545454545454	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	26	0	86	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:232473-232900	Cluster_7587	Pocillopora_meandrina_HIv1___xfSc0000003	232473	232900	428	379	111	1.0	+	UGGAUUGUCUUCAGUUGGGACGUGAUGC	150	2	371	0	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:233077-233724	Cluster_7588	Pocillopora_meandrina_HIv1___xfSc0000003	233077	233724	648	349	183	1.0	+	UCGGUCUGGUCGCUCUGGAUGAUGACGC	19	2	339	2	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:234001-234669	Cluster_7589	Pocillopora_meandrina_HIv1___xfSc0000003	234001	234669	669	666	314	0.9984984984984985	+	UAAGACUACGUGAAUUGGAAUUUGAGGU	28	5	637	4	3	6	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000003:234871-235369	Cluster_7590	Pocillopora_meandrina_HIv1___xfSc0000003	234871	235369	499	709	253	0.997179125528914	+	UGCGUGUCCUUUUCUGCUGAGUUUGGAA	84	8	683	6	5	4	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:8030-8746	Cluster_7591	Pocillopora_meandrina_HIv1___xfSc0000004	8030	8746	717	329	176	0.057750759878419454	-	UGAAACUAAUCGGUCACGAAGGCGCUCGGU	24	2	305	3	1	9	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:10888-11418	Cluster_7592	Pocillopora_meandrina_HIv1___xfSc0000004	10888	11418	531	553	221	0.0054249547920434	-	UCAGACGUGAACUGUGGACCAUUAUC	28	1	540	1	2	4	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:11539-11968	Cluster_7593	Pocillopora_meandrina_HIv1___xfSc0000004	11539	11968	430	548	125	0.014598540145985401	-	UCGGAUCUAGUUGAUGACCUUGUGGUUCU	102	1	539	2	1	2	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:42435-42862	Cluster_7594	Pocillopora_meandrina_HIv1___xfSc0000004	42435	42862	428	492	60	0.9247967479674797	+	UUGGACAAAGCAUCACUAAACAAAGUUU	311	2	481	0	0	9	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:148429-148965	Cluster_7595	Pocillopora_meandrina_HIv1___xfSc0000004	148429	148965	537	523	107	0.01338432122370937	-	GAUAUUGUCAGACAAGAUGCCAAACUGAA	64	11	490	0	7	3	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:199831-200258	Cluster_7596	Pocillopora_meandrina_HIv1___xfSc0000004	199831	200258	428	93	25	0.978494623655914	+	UGAAACUCUGAUCUGAAAAUAUUUUUAAAAC	37	0	93	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:204461-204976	Cluster_7597	Pocillopora_meandrina_HIv1___xfSc0000004	204461	204976	516	633	76	0.688783570300158	.	UUGGACAAAGCAUCACUAAACAAAGUUU	275	3	605	0	1	24	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:227068-227492	Cluster_7598	Pocillopora_meandrina_HIv1___xfSc0000004	227068	227492	425	82	35	0.9878048780487805	+	UAUUACAGAUACAAAAAACUCAUUAAGGCGU	23	0	81	1	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:261818-262245	Cluster_7599	Pocillopora_meandrina_HIv1___xfSc0000004	261818	262245	428	471	55	0.9639065817409767	+	UUGGACAAAGCAUCACUAAACAAAGUUU	293	1	452	0	0	18	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:263030-263438	Cluster_7600	Pocillopora_meandrina_HIv1___xfSc0000004	263030	263438	409	74	10	0.7567567567567568	.	UAAGCUUUCGUCCAUGUUAUCACUU	34	0	74	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:332420-333223	Cluster_7601	Pocillopora_meandrina_HIv1___xfSc0000004	332420	333223	804	511	268	0.12720156555772993	-	UGUGAGUUAUGUGACCCUGAACAGC	29	24	417	14	18	22	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000004:334456-334777	Cluster_7602	Pocillopora_meandrina_HIv1___xfSc0000004	334456	334777	322	336	118	0.017857142857142856	-	UGCUUCUUUCUCGAUUUGUGAGAACUUCUUC	26	0	333	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:78981-79408	Cluster_7603	Pocillopora_meandrina_HIv1___xfSc0000006	78981	79408	428	227	110	0.9427312775330396	+	UGUAAUCUAUCCAGGCUUGUGAGCCCUU	47	1	218	2	1	1	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:79803-80210	Cluster_7604	Pocillopora_meandrina_HIv1___xfSc0000006	79803	80210	408	197	125	0.6192893401015228	.	ACUGGAUACAAAACUGCUCGAUGC	19	3	140	2	3	9	40	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000006:105567-106030	Cluster_7605	Pocillopora_meandrina_HIv1___xfSc0000006	105567	106030	464	1379	198	0.09644670050761421	-	UUGGCAGUUGCAUUUUCUCCGAGAUCUCUA	218	16	1232	17	7	27	80	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:38630-39054	Cluster_7606	Pocillopora_meandrina_HIv1___xfSc0000007	38630	39054	425	243	119	0.9629629629629629	+	UCAUGGAUUUAUCAGCUAUUACUUUGGU	32	2	232	0	3	2	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:39429-39855	Cluster_7607	Pocillopora_meandrina_HIv1___xfSc0000007	39429	39855	427	346	137	0.9219653179190751	+	UCCAAUCACACACAGUUCUCCUGCGGC	89	3	321	2	3	0	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:39939-40365	Cluster_7608	Pocillopora_meandrina_HIv1___xfSc0000007	39939	40365	427	128	49	0.9140625	+	UGCUUCAUUUUGGUUCUGUAGUAACACA	43	0	119	0	3	1	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:40383-40954	Cluster_7609	Pocillopora_meandrina_HIv1___xfSc0000007	40383	40954	572	1238	424	0.9046849757673667	+	UCUCAUGUUGGUACUGCUCACUCGCUG	111	70	1061	9	5	48	45	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:41236-41663	Cluster_7610	Pocillopora_meandrina_HIv1___xfSc0000007	41236	41663	428	245	134	0.9387755102040817	+	UCAGAUCUUCCCAUGUACAUUCAUCGA	22	3	230	1	1	5	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:41755-42507	Cluster_7611	Pocillopora_meandrina_HIv1___xfSc0000007	41755	42507	753	917	347	0.8953107960741549	+	UGUACCUUCAGUGAUAAUCAGACCUUUG	84	13	870	2	4	9	19	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:77076-77505	Cluster_7612	Pocillopora_meandrina_HIv1___xfSc0000007	77076	77505	430	119	33	0.9915966386554622	+	AUUGCAAGCAAACGGCUCGGAGUCUUUUUC	69	20	91	5	2	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:81664-82093	Cluster_7613	Pocillopora_meandrina_HIv1___xfSc0000007	81664	82093	430	292	51	0.9931506849315068	+	AUUGCAAGCCUUCUUCGUGCAAGCCUGACC	151	11	279	0	1	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:125627-126431	Cluster_7614	Pocillopora_meandrina_HIv1___xfSc0000007	125627	126431	805	2719	536	0.01250459727841118	-	UAUUUGAUCUGUCUACCUCUUUAAAGGA	273	24	2607	11	8	6	63	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000007:248543-248972	Cluster_7615	Pocillopora_meandrina_HIv1___xfSc0000007	248543	248972	430	1818	64	1.0	+	AUUGCAAGCAAACGGCUAGGAGUCUUCUU	1217	1	1813	0	1	3	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000012:38929-39359	Cluster_7616	Pocillopora_meandrina_HIv1___xfSc0000012	38929	39359	431	249	83	0.9919678714859438	+	UUGAAUACUUUAAUGACAACGAUGAAAC	56	9	237	0	2	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000012:147097-147519	Cluster_7617	Pocillopora_meandrina_HIv1___xfSc0000012	147097	147519	423	200	108	0.495	.	UGGUAAAUGAAGGUUCCUGGAGGCAUGAC	14	10	146	3	6	21	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:13538-14067	Cluster_7618	Pocillopora_meandrina_HIv1___xfSc0000017	13538	14067	530	548	190	0.9835766423357665	+	UGCUCAUAUCUAAUAGGACAACUGCCGUC	62	6	529	1	0	2	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:39350-39877	Cluster_7619	Pocillopora_meandrina_HIv1___xfSc0000017	39350	39877	528	60456	2152	0.00028119624189493187	-	CCCCGUGUUGUAGGCUU	6453	30869	17529	1280	2175	4628	3975	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:39995-40400	Cluster_7620	Pocillopora_meandrina_HIv1___xfSc0000017	39995	40400	406	163	106	0.9938650306748467	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	52	79	7	3	10	12	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:41579-41995	Cluster_7621	Pocillopora_meandrina_HIv1___xfSc0000017	41579	41995	417	103	52	0.0	-	CCGUGUUGUAGGCUU	9	58	26	0	4	7	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:42221-43151	Cluster_7622	Pocillopora_meandrina_HIv1___xfSc0000017	42221	43151	931	2163	850	0.9967637540453075	+	UGUGGGUAACUCGAGCGUAUAA	100	1062	446	184	225	147	99	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:43800-44315	Cluster_7623	Pocillopora_meandrina_HIv1___xfSc0000017	43800	44315	516	7952	1908	0.006161971830985915	-	AGUUAAGCCCUGUCGGGCGGGGUUAGUACUU	206	3360	3151	464	340	321	316	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:44823-45389	Cluster_7624	Pocillopora_meandrina_HIv1___xfSc0000017	44823	45389	567	2261	555	1.0	+	CGUUCGCGCUCGUCCCCGC	194	1102	478	168	278	133	102	N	N	nve-miR-9415
Pocillopora_meandrina_HIv1___xfSc0000017:46013-46436	Cluster_7625	Pocillopora_meandrina_HIv1___xfSc0000017	46013	46436	424	364	119	0.0027472527472527475	-	CCCCGUGUUGUAGGCUU	41	219	64	6	21	37	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:47103-47608	Cluster_7626	Pocillopora_meandrina_HIv1___xfSc0000017	47103	47608	506	10682	1852	0.9991574611495975	+	CAUUGCACUUCGACUG	413	3705	4004	697	716	817	743	N	N	nve-miR-9415
Pocillopora_meandrina_HIv1___xfSc0000017:48235-48651	Cluster_7627	Pocillopora_meandrina_HIv1___xfSc0000017	48235	48651	417	107	55	0.0	-	CCCCGUGUUGUAGGCUU	17	68	21	2	0	7	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:50458-50978	Cluster_7628	Pocillopora_meandrina_HIv1___xfSc0000017	50458	50978	521	5239	1060	0.0026722656995609847	-	UGGGAAUACCCCGUGUUGUAGGCUU	198	2367	1732	204	271	367	298	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:51490-52056	Cluster_7629	Pocillopora_meandrina_HIv1___xfSc0000017	51490	52056	567	15825	1606	0.999304897314376	+	CGUUCGCGCUCGUCCCCGC	2854	10237	1841	1196	1509	698	344	N	N	nve-miR-9415
Pocillopora_meandrina_HIv1___xfSc0000017:52682-53104	Cluster_7630	Pocillopora_meandrina_HIv1___xfSc0000017	52682	53104	423	257	94	0.0	-	CCCCGUGUUGUAGGCUU	26	147	58	8	5	25	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:54903-55423	Cluster_7631	Pocillopora_meandrina_HIv1___xfSc0000017	54903	55423	521	13132	1090	0.00022844958879074018	-	CCCCGUGUUGUAGGCUU	1610	7889	2860	321	515	810	737	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:55539-55941	Cluster_7632	Pocillopora_meandrina_HIv1___xfSc0000017	55539	55941	403	154	95	0.9935064935064936	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	66	62	8	6	8	4	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:57122-57546	Cluster_7633	Pocillopora_meandrina_HIv1___xfSc0000017	57122	57546	425	466	151	0.0	-	CCCCGUGUUGUAGGCUU	40	255	110	11	25	40	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:59339-59761	Cluster_7634	Pocillopora_meandrina_HIv1___xfSc0000017	59339	59761	423	237	82	0.0	-	CCCCGUGUUGUAGGCUU	22	147	50	4	10	13	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:59980-60380	Cluster_7635	Pocillopora_meandrina_HIv1___xfSc0000017	59980	60380	401	177	122	0.9887005649717514	+	GAUACGCUGCUCAUUGA	10	75	77	5	5	8	7	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:61559-61983	Cluster_7636	Pocillopora_meandrina_HIv1___xfSc0000017	61559	61983	425	393	143	0.0	-	CCCCGUGUUGUAGGCUU	33	213	88	8	22	35	27	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:62191-63035	Cluster_7637	Pocillopora_meandrina_HIv1___xfSc0000017	62191	63035	845	649	323	0.9969183359013868	+	AUACUUACCUGACGCGG	49	327	175	31	36	44	36	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:63779-64204	Cluster_7638	Pocillopora_meandrina_HIv1___xfSc0000017	63779	64204	426	709	188	0.0	-	CCGUGUUGUAGGCUU	57	415	159	18	16	57	44	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:65997-66422	Cluster_7639	Pocillopora_meandrina_HIv1___xfSc0000017	65997	66422	426	680	185	0.0	-	CCCCGUGUUGUAGGCUU	50	383	155	13	21	67	41	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:66629-67039	Cluster_7640	Pocillopora_meandrina_HIv1___xfSc0000017	66629	67039	411	220	142	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	78	98	4	13	16	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:68215-68640	Cluster_7641	Pocillopora_meandrina_HIv1___xfSc0000017	68215	68640	426	558	158	0.0	-	CCCCGUGUUGUAGGCUU	65	327	132	15	8	47	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:68847-69809	Cluster_7642	Pocillopora_meandrina_HIv1___xfSc0000017	68847	69809	963	2042	778	0.9995102840352595	+	CGUUCGCGCUCGUCCCCGC	115	1011	548	132	158	100	93	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:70434-70859	Cluster_7643	Pocillopora_meandrina_HIv1___xfSc0000017	70434	70859	426	728	177	0.0	-	CCCCGUGUUGUAGGCUU	88	441	159	14	29	48	37	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:71066-71476	Cluster_7644	Pocillopora_meandrina_HIv1___xfSc0000017	71066	71476	411	223	144	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	69	103	14	13	6	18	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:72652-73077	Cluster_7645	Pocillopora_meandrina_HIv1___xfSc0000017	72652	73077	426	752	202	0.0013297872340425532	-	CCCCGUGUUGUAGGCUU	74	446	171	16	23	61	35	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:73284-73726	Cluster_7646	Pocillopora_meandrina_HIv1___xfSc0000017	73284	73726	443	231	148	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	77	90	16	13	21	14	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:74870-75296	Cluster_7647	Pocillopora_meandrina_HIv1___xfSc0000017	74870	75296	427	682	188	0.0	-	CCCCGUGUUGUAGGCUU	62	359	181	21	36	47	38	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:75502-75940	Cluster_7648	Pocillopora_meandrina_HIv1___xfSc0000017	75502	75940	439	241	139	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	11	79	101	7	24	13	17	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:77088-77512	Cluster_7649	Pocillopora_meandrina_HIv1___xfSc0000017	77088	77512	425	420	144	0.004761904761904762	-	CCCCGUGUUGUAGGCUU	42	238	106	8	14	29	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:77720-78163	Cluster_7650	Pocillopora_meandrina_HIv1___xfSc0000017	77720	78163	444	243	151	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	14	94	92	9	13	23	12	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:79307-79732	Cluster_7651	Pocillopora_meandrina_HIv1___xfSc0000017	79307	79732	426	708	177	0.0	-	CCCCGUGUUGUAGGCUU	67	410	160	22	35	40	41	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:79939-80377	Cluster_7652	Pocillopora_meandrina_HIv1___xfSc0000017	79939	80377	439	224	137	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	16	94	92	11	7	9	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:81525-81950	Cluster_7653	Pocillopora_meandrina_HIv1___xfSc0000017	81525	81950	426	673	194	0.0	-	CCCCGUGUUGUAGGCUU	45	362	175	18	30	44	44	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:82157-82567	Cluster_7654	Pocillopora_meandrina_HIv1___xfSc0000017	82157	82567	411	222	148	1.0	+	GGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	83	91	9	12	16	11	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:83743-84168	Cluster_7655	Pocillopora_meandrina_HIv1___xfSc0000017	83743	84168	426	670	160	0.0	-	CCCCGUGUUGUAGGCUU	63	395	149	14	24	48	40	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:84375-84785	Cluster_7656	Pocillopora_meandrina_HIv1___xfSc0000017	84375	84785	411	237	151	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	8	98	91	11	15	13	9	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:85961-86385	Cluster_7657	Pocillopora_meandrina_HIv1___xfSc0000017	85961	86385	425	505	151	0.005940594059405941	-	CCCCGUGUUGUAGGCUU	42	299	117	14	21	29	25	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:86593-87030	Cluster_7658	Pocillopora_meandrina_HIv1___xfSc0000017	86593	87030	438	268	172	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	13	102	97	7	20	20	22	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:88179-88697	Cluster_7659	Pocillopora_meandrina_HIv1___xfSc0000017	88179	88697	519	5831	1061	0.0006859886811867604	-	CCCCGUGUUGUAGGCUU	317	2559	1950	145	330	433	414	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:89224-89774	Cluster_7660	Pocillopora_meandrina_HIv1___xfSc0000017	89224	89774	551	1371	596	0.9985412107950401	+	CUCGAGCGUAUAAUUUCUGGUAGUGGGGG	42	497	455	105	111	116	87	N	N	nve-miR-9415
Pocillopora_meandrina_HIv1___xfSc0000017:90404-90824	Cluster_7661	Pocillopora_meandrina_HIv1___xfSc0000017	90404	90824	421	208	91	0.0	-	CCGUGUUGUAGGCUU	20	128	50	6	5	10	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:92620-93041	Cluster_7662	Pocillopora_meandrina_HIv1___xfSc0000017	92620	93041	422	196	86	0.00510204081632653	-	CCCCGUGUUGUAGGCUU	16	116	41	6	7	16	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:94838-95251	Cluster_7663	Pocillopora_meandrina_HIv1___xfSc0000017	94838	95251	414	79	38	0.012658227848101266	-	CCCCGUGUUGUAGGCUU	7	47	12	1	3	10	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:95471-95881	Cluster_7664	Pocillopora_meandrina_HIv1___xfSc0000017	95471	95881	411	172	106	1.0	+	CGGCCUUUUGGCUAAGAUCAAGUGUAGUA	15	43	89	8	9	10	13	N	N	efu-miR-9341
Pocillopora_meandrina_HIv1___xfSc0000017:97054-97573	Cluster_7665	Pocillopora_meandrina_HIv1___xfSc0000017	97054	97573	520	14014	920	0.00042814328528614244	-	CCCCGUGUUGUAGGCUU	1964	10302	420	461	865	1786	180	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000017:97674-98247	Cluster_7666	Pocillopora_meandrina_HIv1___xfSc0000017	97674	98247	574	9491	1134	0.9993678221472975	+	CAAGUGUAGUAUCUGUUCU	536	3884	3789	197	604	675	342	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000021:6767-7195	Cluster_7667	Pocillopora_meandrina_HIv1___xfSc0000021	6767	7195	429	164	56	0.042682926829268296	-	AAUGGGAAAACGAGAACAGCGUGAGUGUU	37	5	128	4	1	11	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000021:7791-8219	Cluster_7668	Pocillopora_meandrina_HIv1___xfSc0000021	7791	8219	429	2010	80	0.007960199004975124	-	UGAAACUCUGAUCUGAAAAUAUUUUUA	1208	6	2000	0	0	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000058:8314-8834	Cluster_7669	Pocillopora_meandrina_HIv1___xfSc0000058	8314	8834	521	511	192	0.05283757338551859	-	UUUUCGGCUACUUCUGUCCAUUUUUGGC	59	2	496	0	1	3	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000058:10007-10445	Cluster_7670	Pocillopora_meandrina_HIv1___xfSc0000058	10007	10445	439	307	140	0.12052117263843648	-	UACAGCCGAUAUGGAAGCAUUUAAUUC	28	3	284	0	2	7	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000059:13829-14262	Cluster_7671	Pocillopora_meandrina_HIv1___xfSc0000059	13829	14262	434	295	96	1.0	+	UGUACUCUGCCGAUAGCUUGCGAUUUUCAUC	51	1	288	0	4	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000146:258-1373	Cluster_7672	Pocillopora_meandrina_HIv1___xfSc0000146	258	1373	1116	4112	827	0.8672178988326849	+	UACUUUCUGAUUGACUUGGAGUGUGGGG	729	75	3580	13	19	133	292	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000146:25017-25637	Cluster_7673	Pocillopora_meandrina_HIv1___xfSc0000146	25017	25637	621	813	187	0.34932349323493234	.	UUAUUCUCUUCUUUGAUAAUGACUUUGA	134	5	640	2	12	121	33	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:3124-3572	Cluster_7674	Pocillopora_meandrina_HIv1___xfSc0000168	3124	3572	449	326	151	0.15950920245398773	-	UACAUGUCAACAAUGUGGCUGUUCGAAGAUU	52	7	273	4	8	6	28	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:3831-4338	Cluster_7675	Pocillopora_meandrina_HIv1___xfSc0000168	3831	4338	508	579	270	0.07081174438687392	-	UCUUCUUUGGACUGUUUUUUGCAUAAAGGA	34	1	550	3	3	6	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:6834-7264	Cluster_7676	Pocillopora_meandrina_HIv1___xfSc0000168	6834	7264	431	658	179	0.019756838905775075	-	UCUUCCAUCUUCUGUUCUGACUUGAUAG	165	1	644	1	3	4	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:15158-15584	Cluster_7677	Pocillopora_meandrina_HIv1___xfSc0000168	15158	15584	427	175	82	0.005714285714285714	-	UGUACUUCUCUGACCACUCUAGUUCAGGA	44	7	159	4	0	0	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:15952-16965	Cluster_7678	Pocillopora_meandrina_HIv1___xfSc0000168	15952	16965	1014	1046	393	0.0019120458891013384	-	UCUUGACUUAUGUGGCCUGCAGUGGACUGC	43	17	1000	5	2	14	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:17735-18328	Cluster_7679	Pocillopora_meandrina_HIv1___xfSc0000168	17735	18328	594	394	189	0.0025380710659898475	-	UUGGCUGAUCUUCUUUAUUAUAUGUGAGU	37	3	386	1	2	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:21430-22809	Cluster_7680	Pocillopora_meandrina_HIv1___xfSc0000168	21430	22809	1380	1415	530	0.16607773851590105	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCUGG	75	32	1302	14	6	19	42	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:22905-23332	Cluster_7681	Pocillopora_meandrina_HIv1___xfSc0000168	22905	23332	428	381	88	0.031496062992125984	-	UACGUGUAGACUGAGCCAUUGCCUAGU	109	2	324	4	1	1	49	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000168:31977-32817	Cluster_7682	Pocillopora_meandrina_HIv1___xfSc0000168	31977	32817	841	1224	376	0.15849673202614378	-	UAAACUACUAACGGCUUUUGACAAUGCUUU	106	22	1118	2	12	32	38	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000175:30110-30937	Cluster_7683	Pocillopora_meandrina_HIv1___xfSc0000175	30110	30937	828	414	121	0.9855072463768116	+	UAGGACAACUGAGAAUCCACGUAGACUC	109	0	408	1	3	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000206:12993-13422	Cluster_7684	Pocillopora_meandrina_HIv1___xfSc0000206	12993	13422	430	15773	176	0.9972738223546567	+	UACCAAGGUCUUGUAGUCUAGUACAACU	6053	15	15682	1	29	4	42	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000212:2286-2714	Cluster_7685	Pocillopora_meandrina_HIv1___xfSc0000212	2286	2714	429	213	107	0.8873239436619719	+	UGACUUAUAACAGCGACUUUGCACUUUUA	39	5	202	0	0	2	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:18839-19448	Cluster_7686	Pocillopora_meandrina_HIv1___xfSc0000217	18839	19448	610	511	151	0.9060665362035225	+	UGACUGUCGGUCAACUGUCGGCC	44	10	390	3	5	50	53	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:24561-24987	Cluster_7687	Pocillopora_meandrina_HIv1___xfSc0000217	24561	24987	427	167	53	1.0	+	ACAGAUCGGAUCACAGAUCAUGUGAGC	45	32	133	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:27133-27697	Cluster_7688	Pocillopora_meandrina_HIv1___xfSc0000217	27133	27697	565	207	78	0.024154589371980676	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	26	3	204	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:33135-33560	Cluster_7689	Pocillopora_meandrina_HIv1___xfSc0000217	33135	33560	426	140	70	0.06428571428571428	-	UGAUCUGAUUUUACUCGUUGUAGAUAAAAC	16	2	131	0	4	1	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:33893-34458	Cluster_7690	Pocillopora_meandrina_HIv1___xfSc0000217	33893	34458	566	601	285	0.07487520798668885	-	UGAUCUGGUUUGAGUCUUGUAUUAGAAC	24	19	562	1	3	5	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000217:34508-34927	Cluster_7691	Pocillopora_meandrina_HIv1___xfSc0000217	34508	34927	420	89	25	0.011235955056179775	-	UCUUCGUUAGCGUUGUUCGAAAUCUAUA	25	0	89	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000228:24353-24851	Cluster_7692	Pocillopora_meandrina_HIv1___xfSc0000228	24353	24851	499	594	330	0.30976430976430974	.	UGAUCUACAGCUCUUAGGAUGUCAUUUGA	58	45	496	7	11	14	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000237:9779-10472	Cluster_7693	Pocillopora_meandrina_HIv1___xfSc0000237	9779	10472	694	1800	488	0.0005555555555555556	-	GUUAGUGAUGAUGAAGUAAAAGGUCUGAUGU	366	255	1227	74	63	84	97	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000262:25212-25643	Cluster_7694	Pocillopora_meandrina_HIv1___xfSc0000262	25212	25643	432	357	90	0.907563025210084	+	UGACGCUUUCUUGAACGCUGAAUGGAGGA	54	1	355	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000264:26326-26751	Cluster_7695	Pocillopora_meandrina_HIv1___xfSc0000264	26326	26751	426	130	37	0.17692307692307693	-	UGUAUCUUCAGAGGACUUCAGGUCGCUCA	55	7	119	1	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000275:3122-3552	Cluster_7696	Pocillopora_meandrina_HIv1___xfSc0000275	3122	3552	431	141	40	0.014184397163120567	-	UGCACUGCUGUUAAAAACGAUUCGAACUGGC	55	1	139	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000284:20495-20921	Cluster_7697	Pocillopora_meandrina_HIv1___xfSc0000284	20495	20921	427	127	37	0.07086614173228346	-	UAGGACUAACAUCUCGACUUCUUA	24	1	97	0	0	0	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:8594-9028	Cluster_7698	Pocillopora_meandrina_HIv1___xfSc0000343	8594	9028	435	436	148	0.8142201834862385	+	UGAAUGUUGCGAAGCUCUUCGUCCAAAAGA	124	11	393	8	0	11	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:9872-10368	Cluster_7699	Pocillopora_meandrina_HIv1___xfSc0000343	9872	10368	497	841	200	0.4423305588585018	.	AUUCAUGUUAGGUGGUAGAGGUGU	126	59	363	12	98	109	200	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000343:11559-12139	Cluster_7700	Pocillopora_meandrina_HIv1___xfSc0000343	11559	12139	581	2328	447	0.811426116838488	+	UUUCCGUUGCAUUAGAGGACUUCUUGUU	663	53	2100	33	13	29	100	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:78-509	Cluster_7701	Pocillopora_meandrina_HIv1___xfSc0000376	78	509	432	616	87	0.9967532467532467	+	UAUAAUAACUGUUGGUUUCCUGGACAAUC	134	4	596	4	2	3	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:1165-1588	Cluster_7702	Pocillopora_meandrina_HIv1___xfSc0000376	1165	1588	424	129	58	1.0	+	UGCUCUUAAGGAGUCGUCCGAUUUUGAAU	13	2	126	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:1629-2225	Cluster_7703	Pocillopora_meandrina_HIv1___xfSc0000376	1629	2225	597	629	168	0.9761526232114467	+	UAUGUCGUGUGUGCACUUUGGUGACUGC	84	8	590	5	3	10	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:3024-3453	Cluster_7704	Pocillopora_meandrina_HIv1___xfSc0000376	3024	3453	430	1028	75	1.0	+	UGCGAAACCGCGUGUAAAUUCUCUACUAUU	485	0	1020	0	1	0	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:11936-12345	Cluster_7705	Pocillopora_meandrina_HIv1___xfSc0000376	11936	12345	410	125	74	1.0	+	UUUCCUUUCUUUUGUACUUGUCGGACGUGA	11	3	117	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:13856-14560	Cluster_7706	Pocillopora_meandrina_HIv1___xfSc0000376	13856	14560	705	199	69	1.0	+	UGAAACGGUCAAUCUCCUUGAAAUCUGGGA	51	3	191	0	3	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:14913-15432	Cluster_7707	Pocillopora_meandrina_HIv1___xfSc0000376	14913	15432	520	434	145	0.23963133640552994	.	CAGUAUCACAAGAUGGGAAUGAGG	36	10	248	28	9	40	99	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:21858-22264	Cluster_7708	Pocillopora_meandrina_HIv1___xfSc0000376	21858	22264	407	107	38	0.9439252336448598	+	UGUGCAAGCACCAAGUUGAAUGAGAGC	16	0	101	0	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:23490-24614	Cluster_7709	Pocillopora_meandrina_HIv1___xfSc0000376	23490	24614	1125	512	190	0.482421875	.	AUCUUUCCGAGGCUCUGAGUGGG	42	3	331	17	21	83	57	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:28126-28555	Cluster_7710	Pocillopora_meandrina_HIv1___xfSc0000376	28126	28555	430	315	121	0.9206349206349206	+	UACGUGUAGAAAGCCUUCUCUGACAUC	38	1	292	2	2	9	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:28774-29185	Cluster_7711	Pocillopora_meandrina_HIv1___xfSc0000376	28774	29185	412	119	68	0.9495798319327731	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	22	4	114	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:29864-30418	Cluster_7712	Pocillopora_meandrina_HIv1___xfSc0000376	29864	30418	555	609	271	0.916256157635468	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	63	1	580	1	6	7	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:33482-33911	Cluster_7713	Pocillopora_meandrina_HIv1___xfSc0000376	33482	33911	430	690	199	0.9884057971014493	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	161	0	682	0	1	5	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:34260-34679	Cluster_7714	Pocillopora_meandrina_HIv1___xfSc0000376	34260	34679	420	165	102	0.8787878787878788	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	20	1	149	1	3	3	8	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:35966-36401	Cluster_7715	Pocillopora_meandrina_HIv1___xfSc0000376	35966	36401	436	225	76	0.9333333333333333	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	49	0	208	0	2	13	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:41523-41954	Cluster_7716	Pocillopora_meandrina_HIv1___xfSc0000376	41523	41954	432	375	146	0.9493333333333334	+	UGUUUUGGUGUGUUCAAGUAUCUUUGA	29	3	366	1	1	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000376:45892-46320	Cluster_7717	Pocillopora_meandrina_HIv1___xfSc0000376	45892	46320	429	96	30	0.9895833333333334	+	UCAAAUCUGUACCAGUGCCACUCAGCAUC	58	0	95	0	1	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000423:29248-29694	Cluster_7718	Pocillopora_meandrina_HIv1___xfSc0000423	29248	29694	447	1682	261	0.07847800237812129	-	UGAAUCUUCUACGAAUGCUGUGAGGCGCU	146	24	1465	13	39	111	30	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000436:26682-27108	Cluster_7719	Pocillopora_meandrina_HIv1___xfSc0000436	26682	27108	427	176	76	0.0	-	UGAUUGACGUACGGUAUUUGAGACGC	20	5	163	0	1	3	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000436:42973-43402	Cluster_7720	Pocillopora_meandrina_HIv1___xfSc0000436	42973	43402	430	781	144	0.9884763124199744	+	UAGACAUGACAUCAGCCUCUGAGCCAACUC	269	6	768	1	0	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:3977-4487	Cluster_7721	Pocillopora_meandrina_HIv1___xfSc0000445	3977	4487	511	1301	325	0.13835511145272866	-	UGAUCCGCUCCCAUUCGAACUUUAGGC	124	7	1183	5	10	39	57	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:21289-22084	Cluster_7722	Pocillopora_meandrina_HIv1___xfSc0000445	21289	22084	796	416	194	0.1201923076923077	-	UGUUCCUGAACUUCGCGCGAAAACUCGA	39	1	387	0	3	8	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000445:22475-22901	Cluster_7723	Pocillopora_meandrina_HIv1___xfSc0000445	22475	22901	427	187	92	0.19786096256684493	-	UGAACAAGGAAACACCAAAUAAUAUCUC	16	4	164	3	1	5	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:1-800	Cluster_7724	Pocillopora_meandrina_HIv1___xfSc0000477	1	800	800	703	309	0.08534850640113797	-	UGAUCUAAAUUUAACAAUCUUGCCUUUU	67	9	637	4	4	12	37	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:846-1421	Cluster_7725	Pocillopora_meandrina_HIv1___xfSc0000477	846	1421	576	3199	554	0.010940919037199124	-	UGUGAUAUUCCGAACACUUGAAUGAGUCA	187	19	3027	6	21	32	94	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000477:1796-2238	Cluster_7726	Pocillopora_meandrina_HIv1___xfSc0000477	1796	2238	443	1554	246	0.030244530244530245	-	UUCGAUCUAUACCAUCUGGAGGCUAAUU	301	8	1516	3	2	4	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:19502-19910	Cluster_7727	Pocillopora_meandrina_HIv1___xfSc0000540	19502	19910	409	95	38	0.9578947368421052	+	UCUAGCAGAUCGUACUCCUCAAGGUGCU	21	3	89	0	1	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:23087-23501	Cluster_7728	Pocillopora_meandrina_HIv1___xfSc0000540	23087	23501	415	162	32	1.0	+	UUGGAAUUCAACAGA	106	112	49	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:39656-40079	Cluster_7729	Pocillopora_meandrina_HIv1___xfSc0000540	39656	40079	424	261	66	0.07662835249042145	-	AUGGACAGAACACAGGAAGUGCU	69	11	91	1	8	124	26	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000540:41358-41787	Cluster_7730	Pocillopora_meandrina_HIv1___xfSc0000540	41358	41787	430	362	93	0.9723756906077348	+	UAAGAUAUCGUUAACAACUCGAAGAAGCG	71	6	345	2	5	2	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:10286-10857	Cluster_7731	Pocillopora_meandrina_HIv1___xfSc0000555	10286	10857	572	2128	262	1.0	+	UGUUCCAAUCUUUUGCAUUCUUGUAUCUUU	542	2	2108	4	0	8	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:20847-21271	Cluster_7732	Pocillopora_meandrina_HIv1___xfSc0000555	20847	21271	425	164	71	0.9695121951219512	+	UUUCCUAUUUUCAGUUAAAAACUCUUAU	15	1	162	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:21513-21935	Cluster_7733	Pocillopora_meandrina_HIv1___xfSc0000555	21513	21935	423	226	86	0.9734513274336283	+	UGUCAUGUCAACGUCUGGUUGGAACCAUC	40	4	220	1	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:22029-22721	Cluster_7734	Pocillopora_meandrina_HIv1___xfSc0000555	22029	22721	693	751	309	0.9041278295605859	+	UAUGAUUGAAUUGACUCGUGGUAGCUAUU	26	17	701	1	1	13	18	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:22903-23331	Cluster_7735	Pocillopora_meandrina_HIv1___xfSc0000555	22903	23331	429	187	73	0.9786096256684492	+	UUGGAGAUGAUCUUUGCGAUGACAUUGUG	31	4	177	0	2	0	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:34374-34813	Cluster_7736	Pocillopora_meandrina_HIv1___xfSc0000555	34374	34813	440	2390	320	0.9761506276150628	+	UAAUUUAUCCAUGUAUUCUUGAAGACGU	302	10	2321	4	2	29	24	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:35809-36770	Cluster_7737	Pocillopora_meandrina_HIv1___xfSc0000555	35809	36770	962	686	331	0.9154518950437318	+	UUCGAUCUUUUCUGUGUAAUGUGUAGC	24	13	636	8	3	10	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:39714-40143	Cluster_7738	Pocillopora_meandrina_HIv1___xfSc0000555	39714	40143	430	556	181	0.052158273381294966	-	UAACGUAGUGGUAUCCAUUGAACAAGUUC	89	5	475	1	5	7	63	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000555:40403-41452	Cluster_7739	Pocillopora_meandrina_HIv1___xfSc0000555	40403	41452	1050	900	399	0.27444444444444444	.	ACGUAUUGCAAGCUUGAAAUUAACCACA	51	12	852	5	2	13	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000566:34959-35386	Cluster_7740	Pocillopora_meandrina_HIv1___xfSc0000566	34959	35386	428	140	40	0.9714285714285714	+	UGCUCAAUGUCCAGGACUCUCUCUGAGU	29	0	137	0	0	1	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:366-1215	Cluster_7741	Pocillopora_meandrina_HIv1___xfSc0000567	366	1215	850	364	166	0.09615384615384616	-	UGAGAUUUCACAAUGGAUAAGUAGAGUG	44	10	336	2	1	8	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:6059-8282	Cluster_7742	Pocillopora_meandrina_HIv1___xfSc0000567	6059	8282	2224	20997	2551	0.9704243463351907	+	UCCGAGACUGUAGAUCCGAGUUGAUCCA	3193	88	20164	95	100	201	349	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:8800-9268	Cluster_7743	Pocillopora_meandrina_HIv1___xfSc0000567	8800	9268	469	363	161	0.9366391184573003	+	UGAUAGAUCUUCUCCCUCGCCUUGGUUG	28	11	343	0	2	1	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:9273-10549	Cluster_7744	Pocillopora_meandrina_HIv1___xfSc0000567	9273	10549	1277	1746	805	0.8276059564719358	+	UGUAACGGAACAGACUCCAAUAUACA	45	36	1496	17	20	44	133	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:25703-26133	Cluster_7745	Pocillopora_meandrina_HIv1___xfSc0000567	25703	26133	431	151	46	0.9933774834437086	+	UGCAUGAUCUGUCUAAGCUAAGGAAACGAGC	41	2	149	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000567:42864-43305	Cluster_7746	Pocillopora_meandrina_HIv1___xfSc0000567	42864	43305	442	458	167	0.9912663755458515	+	UGCUUUCUGUUCUCUUGUUCUCCAACAAA	62	0	446	1	5	2	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000570:34339-34764	Cluster_7747	Pocillopora_meandrina_HIv1___xfSc0000570	34339	34764	426	120	28	1.0	+	AACUACUGCUCGUACUCUAGAUGACAAUCA	26	0	119	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:18000-18418	Cluster_7748	Pocillopora_meandrina_HIv1___xfSc0000579	18000	18418	419	289	180	0.9619377162629758	+	UCAGACACGUGGAUACUUGCGAUGAAGU	10	3	268	2	1	6	9	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:18777-19201	Cluster_7749	Pocillopora_meandrina_HIv1___xfSc0000579	18777	19201	425	221	96	0.9230769230769231	+	UGAAAGAACUUUCAUGAUGCGUUUUACCU	20	0	204	2	4	8	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000579:19932-20358	Cluster_7750	Pocillopora_meandrina_HIv1___xfSc0000579	19932	20358	427	198	63	0.696969696969697	.	UGAUUCGAUUUUUCUCUUUUUAGGACCAUC	37	0	161	1	3	2	31	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:27709-28147	Cluster_7751	Pocillopora_meandrina_HIv1___xfSc0000583	27709	28147	439	672	186	0.05505952380952381	-	UGAAGAGAUCCUGAUAUUCCAAUGGCG	116	4	638	1	3	19	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:28385-28811	Cluster_7752	Pocillopora_meandrina_HIv1___xfSc0000583	28385	28811	427	247	140	0.12550607287449392	-	UGAGUCGAGGUUAUUCACAAUACGAGC	37	6	214	0	1	5	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:29248-30468	Cluster_7753	Pocillopora_meandrina_HIv1___xfSc0000583	29248	30468	1221	2002	487	0.2202797202797203	.	UGAUAGAGCUUCAUCUUCUUCGCUGAUGA	476	13	1889	8	13	26	53	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:31468-32249	Cluster_7754	Pocillopora_meandrina_HIv1___xfSc0000583	31468	32249	782	372	145	0.21774193548387097	.	UAUACUCCAAAGGUUCUGAAAACGAAUG	45	7	308	3	4	33	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000583:33456-33890	Cluster_7755	Pocillopora_meandrina_HIv1___xfSc0000583	33456	33890	435	1169	137	0.019674935842600515	-	UAACUUCAACUAGAUCGAAAUACUCGUGA	629	153	982	5	5	14	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000596:34954-35844	Cluster_7756	Pocillopora_meandrina_HIv1___xfSc0000596	34954	35844	891	1690	498	0.8923076923076924	+	UUGGACUUCUUUGCUUCACCUGAGGCAGC	208	13	1588	12	14	34	29	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:1-6639	Cluster_7757	Pocillopora_meandrina_HIv1___xfSc0000616	1	6639	6639	8457626	151772	0.00021247096998614032	-	CUCGGGCUGAGACUUGAAGCG	1453296	2550566	2231799	1857248	588476	462182	767355	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:9553-10876	Cluster_7758	Pocillopora_meandrina_HIv1___xfSc0000616	9553	10876	1324	580951	28505	0.0005198373012526013	-	CACUACCGAUAGCCAACUCGAACGUUUCCG	72322	87876	402416	18882	21895	30178	19704	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:10878-15450	Cluster_7759	Pocillopora_meandrina_HIv1___xfSc0000616	10878	15450	4573	5809209	99662	5.491281170982142e-05	-	CUCGGGCUGAGACUUGAAGCG	1456170	1237800	1166429	1807395	520390	384418	692777	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000616:24459-24889	Cluster_7760	Pocillopora_meandrina_HIv1___xfSc0000616	24459	24889	431	10975	403	0.9998177676537585	+	GGGGGUAUAGCUCAGUGGUAGA	3800	1931	3614	569	4271	159	431	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000621:9622-10049	Cluster_7761	Pocillopora_meandrina_HIv1___xfSc0000621	9622	10049	428	82	19	0.0	-	UAAGACAUUUCGCAGAUUUUGACACUCGUU	40	0	82	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000621:37651-38093	Cluster_7762	Pocillopora_meandrina_HIv1___xfSc0000621	37651	38093	443	242	115	0.9132231404958677	+	UCCGUCUAUCUCCGCUCGAACCUUUGGAU	25	2	211	2	3	3	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000655:10705-11254	Cluster_7763	Pocillopora_meandrina_HIv1___xfSc0000655	10705	11254	550	327	125	0.7064220183486238	.	UAUCUUGCAGGUUUGGGAUGAAUUGCU	59	18	284	2	12	7	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000655:14051-14479	Cluster_7764	Pocillopora_meandrina_HIv1___xfSc0000655	14051	14479	429	152	43	0.0	-	UCUGGAAGCAUUAUCUGCCGGUCUGCCUG	43	5	144	2	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:7959-8388	Cluster_7765	Pocillopora_meandrina_HIv1___xfSc0000704	7959	8388	430	306	90	0.8790849673202614	+	UGGAAUCAUGCCUUGCAUCUGUUAUAAC	89	2	288	0	0	9	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:8925-9754	Cluster_7766	Pocillopora_meandrina_HIv1___xfSc0000704	8925	9754	830	638	255	0.5031347962382445	.	UAUAUGGAGUCGUUCUCUGCUGAAGAUG	34	37	471	29	5	23	73	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:21980-22444	Cluster_7767	Pocillopora_meandrina_HIv1___xfSc0000704	21980	22444	465	279	159	0.12544802867383512	-	UUCGUCGAACUUCUUCAGGACUUGUGA	13	1	262	0	5	4	7	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:22891-23317	Cluster_7768	Pocillopora_meandrina_HIv1___xfSc0000704	22891	23317	427	169	94	0.20118343195266272	.	UGUAUUGAUUGAACUUGUCGGUUGACCA	10	2	143	6	3	9	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:25875-26481	Cluster_7769	Pocillopora_meandrina_HIv1___xfSc0000704	25875	26481	607	552	93	0.9891304347826086	+	UGCUUCUCGAUUCACAUUUUCAUUCUGU	120	3	527	1	1	7	13	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:26866-27293	Cluster_7770	Pocillopora_meandrina_HIv1___xfSc0000704	26866	27293	428	205	80	0.9609756097560975	+	UAGGGACCUCACGGCUUACUGCUGAAGU	23	14	187	2	1	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000704:28347-28832	Cluster_7771	Pocillopora_meandrina_HIv1___xfSc0000704	28347	28832	486	4927	444	0.9687436573980109	+	UAUGUUGAACGAGAACUGAGGACCUCGAUC	842	43	4724	9	33	59	59	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000705:276-695	Cluster_7772	Pocillopora_meandrina_HIv1___xfSc0000705	276	695	420	258	26	0.0	-	GUGAAAGGCUAAACAAACUU	56	241	0	11	5	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000705:30668-31330	Cluster_7773	Pocillopora_meandrina_HIv1___xfSc0000705	30668	31330	663	504	106	0.8888888888888888	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	275	1	488	2	0	3	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000716:16771-17199	Cluster_7774	Pocillopora_meandrina_HIv1___xfSc0000716	16771	17199	429	247	71	0.9676113360323887	+	AUCUUCUGAAUCAAGAAAAAAGAGGCUGG	65	0	242	1	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000765:14970-15396	Cluster_7775	Pocillopora_meandrina_HIv1___xfSc0000765	14970	15396	427	123	21	0.008130081300813009	-	AAAUCAAACAUAUCGCGGCAAGGGUGGA	63	3	108	1	2	9	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000811:4425-4855	Cluster_7776	Pocillopora_meandrina_HIv1___xfSc0000811	4425	4855	431	1462	88	0.9993160054719562	+	UUGGAAUUCGAAGCAAGUAACAAUUGACAGG	400	0	1460	0	0	0	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000812:24713-25141	Cluster_7777	Pocillopora_meandrina_HIv1___xfSc0000812	24713	25141	429	360	38	0.002777777777777778	-	UGAAAAAAUCUUCUGUUAUAGACACCUGA	269	2	353	0	0	5	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000824:3691-4115	Cluster_7778	Pocillopora_meandrina_HIv1___xfSc0000824	3691	4115	425	100	44	0.0	-	ACGAAAAUAGUAGAAUGAAGUCAGAAGC	16	1	93	0	1	4	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000824:11830-12653	Cluster_7779	Pocillopora_meandrina_HIv1___xfSc0000824	11830	12653	824	12935	947	0.011751063007344414	-	UGUGACUUCUCUAUCCGCACGCGGCAUU	2156	53	12683	19	54	59	67	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:18635-19900	Cluster_7780	Pocillopora_meandrina_HIv1___xfSc0000836	18635	19900	1266	25850	2775	0.8349709864603482	+	UGAUGAAUUCACAUGUUGACGAACACUUGA	3410	382	22298	213	556	852	1549	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:31963-33875	Cluster_7781	Pocillopora_meandrina_HIv1___xfSc0000836	31963	33875	1913	5430	1460	0.9322283609576427	+	UGGGUUGAAUCUCUUAUCGUCUUGUAGG	449	24	5201	7	25	62	111	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000836:34577-35000	Cluster_7782	Pocillopora_meandrina_HIv1___xfSc0000836	34577	35000	424	235	86	0.9829787234042553	+	UCAUCUCGGUUUUUGCAAAAUGUCAA	18	0	217	0	3	0	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:1884-2309	Cluster_7783	Pocillopora_meandrina_HIv1___xfSc0000840	1884	2309	426	166	65	0.7349397590361446	.	AUUGAUUCUAUUUUGUACGGCCUAGU	46	10	139	3	10	4	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:7618-8047	Cluster_7784	Pocillopora_meandrina_HIv1___xfSc0000840	7618	8047	430	1212	57	1.0	+	AACUGAAGAAUCGAUCUCUGAAAUUGAUG	980	1	1210	0	0	0	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000840:28786-29215	Cluster_7785	Pocillopora_meandrina_HIv1___xfSc0000840	28786	29215	430	253	81	0.6126482213438735	.	UACCGUGAGACUGAAGAACAAAAUUCAAA	33	2	224	0	2	10	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:31263-31871	Cluster_7786	Pocillopora_meandrina_HIv1___xfSc0000868	31263	31871	609	608	190	0.9523026315789473	+	UUCAGUUACGCUUUCGCUCUAAUAGUUGUU	134	12	574	1	1	5	15	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:32704-34952	Cluster_7787	Pocillopora_meandrina_HIv1___xfSc0000868	32704	34952	2249	3873	1278	0.8603150012909889	+	UGUAAAAUCUGGCAUCCUAUUGGAUAAC	175	72	3450	22	34	154	141	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:35232-35930	Cluster_7788	Pocillopora_meandrina_HIv1___xfSc0000868	35232	35930	699	526	212	0.9372623574144486	+	UGUGUCAGAACCCGGCUUGCAUAAGUGA	119	7	484	3	8	18	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:35955-36382	Cluster_7789	Pocillopora_meandrina_HIv1___xfSc0000868	35955	36382	428	212	91	0.9198113207547169	+	UCGAUCCAGAAAGGACUUAAGGUUUCUGU	14	6	201	1	0	1	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000868:36592-36831	Cluster_7790	Pocillopora_meandrina_HIv1___xfSc0000868	36592	36831	240	538	29	0.9907063197026023	+	UGAAUCUCUUGUGAACUAAGGCUUCUGAG	488	2	532	0	0	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000886:1780-2194	Cluster_7791	Pocillopora_meandrina_HIv1___xfSc0000886	1780	2194	415	150	100	0.4	.	UGUGACACUUUGAGACACUCGUGAGACA	16	4	125	2	2	7	10	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000890:8258-8879	Cluster_7792	Pocillopora_meandrina_HIv1___xfSc0000890	8258	8879	622	4001	463	0.051237190702324416	-	UUUGAUCUUGAAAUUAUGAUACCUGGAA	1757	17	3922	11	2	32	17	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000892:18825-19245	Cluster_7793	Pocillopora_meandrina_HIv1___xfSc0000892	18825	19245	421	88	25	0.0	-	CUUGAAUCGUUUGGACUGCGCCA	24	7	1	8	30	31	11	23	N	NA
Pocillopora_meandrina_HIv1___xfSc0000952:31665-32079	Cluster_7794	Pocillopora_meandrina_HIv1___xfSc0000952	31665	32079	415	201	6	0.004975124378109453	-	CGUGGAAGGUAGGCU	174	201	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:14310-14737	Cluster_7795	Pocillopora_meandrina_HIv1___xfSc0000953	14310	14737	428	96	22	1.0	+	UCCUCGGUAGUAUAGUGGUGAGUAUCCC	43	7	87	0	0	1	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:24299-24708	Cluster_7796	Pocillopora_meandrina_HIv1___xfSc0000953	24299	24708	410	197	116	0.40609137055837563	.	ACUGGAUACAAAACUGCUCGAUGC	28	0	141	1	3	6	46	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:24781-25527	Cluster_7797	Pocillopora_meandrina_HIv1___xfSc0000953	24781	25527	747	1262	313	0.04754358161648178	-	UGAGAUUUACGAUUGCAUAUAUUAAGUG	205	11	1227	2	2	4	16	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000953:30618-31037	Cluster_7798	Pocillopora_meandrina_HIv1___xfSc0000953	30618	31037	420	87	29	1.0	+	UCCUCGGUAGUAUAGUGGUAAGUAUCCC	26	20	67	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:3207-3635	Cluster_7799	Pocillopora_meandrina_HIv1___xfSc0000968	3207	3635	429	203	49	0.06896551724137931	-	AUCUUUCCGAGGCUCUGAGUGGG	45	8	86	9	15	71	14	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:7144-7575	Cluster_7800	Pocillopora_meandrina_HIv1___xfSc0000968	7144	7575	432	294	105	0.9455782312925171	+	UACGUGUAGAAAGCCUUCUCUGACAUC	20	3	275	1	3	7	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:7795-8204	Cluster_7801	Pocillopora_meandrina_HIv1___xfSc0000968	7795	8204	410	116	67	0.9137931034482759	+	UAUUUCGUGUGCCCUGAUGGUGAUGAGC	16	0	109	0	0	3	4	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:8885-9439	Cluster_7802	Pocillopora_meandrina_HIv1___xfSc0000968	8885	9439	555	616	285	0.9025974025974026	+	UAAUGAAGUCGUAAUUUGUCCAUCCAGAUC	45	5	589	0	6	4	12	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:12503-12931	Cluster_7803	Pocillopora_meandrina_HIv1___xfSc0000968	12503	12931	429	625	182	0.9888	+	UCUUCCAUCUUCUGUUCUGACUUGAUAG	153	6	606	1	3	7	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:13284-13690	Cluster_7804	Pocillopora_meandrina_HIv1___xfSc0000968	13284	13690	407	167	110	0.8203592814371258	+	UGCUACAUAAUCUUCGACAUCUUUGUUCA	13	2	146	1	3	4	11	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:14987-15421	Cluster_7805	Pocillopora_meandrina_HIv1___xfSc0000968	14987	15421	435	214	82	0.9205607476635514	+	UAUCAAUCUCGAGGUGAAGCUUUCCUUU	38	0	193	0	0	15	6	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:20544-20975	Cluster_7806	Pocillopora_meandrina_HIv1___xfSc0000968	20544	20975	432	380	134	0.9315789473684211	+	UGUUUUGGUGUGUUCAAGUAUCUUUGA	26	4	368	1	1	3	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:24909-25337	Cluster_7807	Pocillopora_meandrina_HIv1___xfSc0000968	24909	25337	429	103	31	0.9902912621359223	+	UCAAAUCUGUACCAGUGCCACUCAGCAUC	58	1	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000968:31116-31526	Cluster_7808	Pocillopora_meandrina_HIv1___xfSc0000968	31116	31526	411	112	55	0.9910714285714286	+	UAGUCGACUUUGUGCAACCCGAGUAA	19	1	104	0	3	3	1	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:14537-14997	Cluster_7809	Pocillopora_meandrina_HIv1___xfSc0000974	14537	14997	461	292	72	0.03424657534246575	-	UGGGCCAUGGUGGAUAGUUGAUAUUCUUC	70	4	280	0	2	4	2	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:16541-16967	Cluster_7810	Pocillopora_meandrina_HIv1___xfSc0000974	16541	16967	427	102	49	1.0	+	UAUUCACAUGUGUUAUCUCGUCGCUCGAUU	27	0	102	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:17063-17815	Cluster_7811	Pocillopora_meandrina_HIv1___xfSc0000974	17063	17815	753	638	279	0.9952978056426333	+	UGCUGUACUCGACGCCAACGUUUCUUGG	26	11	615	2	0	7	3	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:18214-18643	Cluster_7812	Pocillopora_meandrina_HIv1___xfSc0000974	18214	18643	430	360	101	0.9972222222222222	+	UUGGACUGUGCAGCCUUAAUCAGGAACAAC	135	7	343	3	0	2	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000974:18734-19444	Cluster_7813	Pocillopora_meandrina_HIv1___xfSc0000974	18734	19444	711	351	160	0.9629629629629629	+	UGUGUAACUCUACUGUCUUGACAUGACCA	48	16	332	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0000975:5701-6132	Cluster_7814	Pocillopora_meandrina_HIv1___xfSc0000975	5701	6132	432	3077	115	0.0006499837504062399	-	UAACUUCAACUAGAUCAAAAUGCUCGUGA	2178	5	3065	1	0	1	5	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001011:6233-6661	Cluster_7815	Pocillopora_meandrina_HIv1___xfSc0001011	6233	6661	429	361	41	1.0	+	UGAAAAAAUCUUCUGUUAUAGACACCUGA	269	0	356	0	0	5	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:12363-12774	Cluster_7816	Pocillopora_meandrina_HIv1___xfSc0001179	12363	12774	412	180	76	0.05	-	UGUGGUUACGCCCUUCAAGUGAGAAAACUGA	39	3	174	1	0	2	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:14603-15030	Cluster_7817	Pocillopora_meandrina_HIv1___xfSc0001179	14603	15030	428	148	33	0.006756756756756757	-	UGUAAACGGUCUUCUUCAAAUUUCUGGC	40	0	147	0	0	1	0	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001179:15670-16097	Cluster_7818	Pocillopora_meandrina_HIv1___xfSc0001179	15670	16097	428	336	162	0.12797619047619047	-	UGCGAUUUCGUUCCUCGUCCUUGAUGAUG	31	4	298	0	3	10	21	N	N	NA
Pocillopora_meandrina_HIv1___xfSc0001237:1732-2147	Cluster_7819	Pocillopora_meandrina_HIv1___xfSc0001237	1732	2147	416	240	13	1.0	+	GCUGCCGGUCGUUGA	94	240	0	0	0	0	0	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001276:11651-12080	Cluster_7820	Pocillopora_meandrina_HIv1___xpSc0001276	11651	12080	430	2466	72	0.036090835360908353	-	UGAUUUGUUGCUGCCCUCUUGCUGC	1063	9	2412	3	1	14	27	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001280:16194-17090	Cluster_7821	Pocillopora_meandrina_HIv1___xpSc0001280	16194	17090	897	1509	229	0.9575878064943671	+	UGGUAAAAUUCUGUUCAAAGUAGGUGU	215	13	1456	10	4	8	18	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001281:28695-29155	Cluster_7822	Pocillopora_meandrina_HIv1___xpSc0001281	28695	29155	461	21722	645	0.9927723045760058	+	UGAAUGCUGGUAUCUUGAUAGUAGAACA	14080	37	21475	17	46	110	37	N	N	NA
Pocillopora_meandrina_HIv1___xpSc0001344:2542-3535	Cluster_7823	Pocillopora_meandrina_HIv1___xpSc0001344	2542	3535	994	12385	809	0.014129995962858296	-	UUUGUAGGCUCUAACAGUACAUUGUU	4234	175	12019	15	44	45	87	N	N	NA