Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/E-Peve/output/08.3.1-Peve-sRNAseq-ShortStack-sr-galaxy-fastq_groom/ShortStack_out/20240508-sr-galaxy-fastq_groom.bam
Location: Porites_evermani_scaffold_594:158176-158270 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/E-Peve/output/08.3.1-Peve-sRNAseq-ShortStack-sr-galaxy-fastq_groom/ShortStack_out/strucVis/Cluster_760.ps
Locus Name: Cluster_760
AAAACAGACAUUUUCCGUCUCUGCCACUUGUAUCUUCUUUCACGUUUAUCGAUGAAAGAAGUACAAGUGGUAGGGAGGGUAGUGUCGUUAAACCC
..(((.((((((..((.(((((((((((((((.(((((((((((.....)).)))))))))))))))))))))))).)).)))))))))...... (-50.10)
....................CUGCCACUUGUAUuUUCUUUC...................................................... len:21 al:1
....................CUGCCACUcGUAUCUUCUUUCA..................................................... len:22 al:1
....................CUGCCACUcGUAUCUUCUUUC...................................................... len:21 al:1
...................................................AUGAAAGAAGUACAAGUGGc........................ len:20 al:1
....................................................UcAAAGAAGUACAAGUGGUAGGG.................... len:23 al:1
....................................................UcAAAGAAGUACAAGUGGUAGG..................... len:22 al:1
.....................................................aAAAGAAGUACAAGUGGUAGGG.................... len:22 al:1
.....................................................cAAAGAAGUACAAGUGGUAGGG.................... len:22 al:3
.....................................................cAAAGAAGUACAAGUGGUAG...................... len:20 al:2
.....................................................cAAAGAAGUACAAGUGGUAGG..................... len:21 al:5
.....................................................aAAAGAAGUACAAGUGGUAGGGA................... len:23 al:1
......................................................AAAGAAGUACAAGgGGUAGGG.................... len:21 al:4
......................................................AAAGAAGUACAAGUGGU........................ len:17 al:76
......................................................AcAGAAGUACAAGUGGUAGG..................... len:20 al:4
......................................................AAAGAAGUgCAAGUGGUA....................... len:18 al:5
......................................................AAAGAAGUACuAGUGGUAG...................... len:19 al:3
......................................................AAAGAAGUACAAGcGGUAGGG.................... len:21 al:18
......................................................AAAGAAGUACAAGUGGUAaGG.................... len:21 al:14
......................................................AAAGcAGUACAAGUGGUAGGG.................... len:21 al:1
......................................................AAAGAgGUACAAGUGGUAG...................... len:19 al:17
......................................................AAAGAAGUACuAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAAGUACAuGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGUu....................... len:18 al:1
......................................................AAAGAAGUACAAGUGGUAGcG.................... len:21 al:25
......................................................AAAGuAGUACAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGUACAgGUGGUA....................... len:18 al:3
......................................................AAAGAAGUACAAGUaGU........................ len:17 al:1
......................................................AAAGAAGUACAcGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGaAGGG.................... len:21 al:3
......................................................AAAGAAGUACAAaUGGUAGG..................... len:20 al:2
......................................................AAAGAAGUACAAGUGGUAcG..................... len:20 al:1
......................................................AAAGAAGUACAAGcGGUA....................... len:18 al:2
......................................................AAAGuAGUACAAGUGGUAGGG.................... len:21 al:5
......................................................AAAGAAGUACAAGUGGc........................ len:17 al:16
......................................................AAAGAAGUACAAGUGGUg....................... len:18 al:7
......................................................AAAGAAGcACAAGUGGUAGGG.................... len:21 al:17
......................................................AAAGAAGUACAAGUGGUAGGGAa.................. len:23 al:18
......................................................AAAGAAGUACgAGUGGUAGG..................... len:20 al:8
......................................................AAAGAAGUACAAGUuGUAGGG.................... len:21 al:2
......................................................AAAGAAGcACAAGUGGUAG...................... len:19 al:5
......................................................AAgGAAGUACAAGUGGUAGG..................... len:20 al:8
......................................................AAAGAAaUACAAGUGGUAGGG.................... len:21 al:7
......................................................AAgGAAGUACAAGUGGUAGGG.................... len:21 al:43
......................................................AAAGAAGUACAcGUGGUAGGG.................... len:21 al:2
......................................................AAAGAAGUACAAGUGGUgGGGA................... len:22 al:2
......................................................AAAGAAGUACAAGaGGUAGGG.................... len:21 al:3
......................................................cAAGAAGUACAAGUGGUAGGGA................... len:22 al:9
......................................................AAAGAAGUACAAGUGGUAGGGc................... len:22 al:819
......................................................AAAGAAGUACgAGUGGUAGGG.................... len:21 al:39
......................................................AAAGAAGUACAAGUGGUAGGaA................... len:22 al:6
......................................................AAAGAAGUACAAGgGGUAGG..................... len:20 al:1
......................................................AAcGAAGUACAAGUGGUAGGG.................... len:21 al:165
......................................................AAAGAAaUACAAGUGGUA....................... len:18 al:2
......................................................AAAGAAGUACAAGUGGUAaGGA................... len:22 al:1
......................................................AAcGAAGUACAAGUGGU........................ len:17 al:2
......................................................AAAGAAGUACAAGUaGUAGGGA................... len:22 al:2
......................................................AcAGAAGUACAAGUGGUAGGG.................... len:21 al:18
......................................................AAAGAuGUACAAGUGGUAGGG.................... len:21 al:5
......................................................AAAGAAaUACAAGUGGUAG...................... len:19 al:4
......................................................AAAGAAGUACAAuUGGUAGGG.................... len:21 al:3
......................................................AAAGAAGUACAAGUGGaA....................... len:18 al:9
......................................................AAAGAAGUACAAGUGaUAGGG.................... len:21 al:6
......................................................AAAGcAGUACAAGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGcGGUAG...................... len:19 al:10
......................................................cAAGAAGUACAAGUGGUAG...................... len:19 al:47
......................................................AcAGAAGUACAAGUGGUAGGGA................... len:22 al:1
......................................................AAgGAAGUACAAGUGGUA....................... len:18 al:2
......................................................AAuGAAGUACAAGUGGUA....................... len:18 al:2
......................................................AAAGAAGUACAAGUGGUAGuG.................... len:21 al:8
......................................................uAAGAAGUACAAGUGGUAGGG.................... len:21 al:20
......................................................AAAGAAGUACAAGUGGUAGaG.................... len:21 al:237
......................................................AAAGAAGUACAAGUGGUAGGcA................... len:22 al:1
......................................................AAAGAAGUACAAGUGGcAGGGA................... len:22 al:3
......................................................AAAGAAGaACAAGUGGUAGGG.................... len:21 al:2
......................................................AAAGAAGUACAAGUGGUAGG..................... len:20 al:2406
......................................................AAAGAAGUACAAGUGGaAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUaGUAGGG.................... len:21 al:4
......................................................AAAGAAGUACAAGaGGUAGGGA................... len:22 al:1
......................................................AAAGAuGUACAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGUACAAGUGGaAG...................... len:19 al:2
......................................................AgAGAAGUACAAGUGGU........................ len:17 al:1
......................................................AAAGAAGUACAgGUGGUAG...................... len:19 al:15
......................................................AgAGAAGUACAAGUGGUAG...................... len:19 al:24
......................................................AAAGAAcUACAAGUGGUAGGG.................... len:21 al:1
......................................................AAAGAAGUAaAAGUGGUAGGG.................... len:21 al:1
......................................................AAAGAAGaACAAGUGGUAG...................... len:19 al:1
......................................................AAuGAAGUACAAGUGGUAGGGA................... len:22 al:2
......................................................AAAGAAGUACAAGUGGUuG...................... len:19 al:6
......................................................cAAGAAGUACAAGUGGUAGGG.................... len:21 al:84
......................................................AAAGAAGUACgAGUGGUAG...................... len:19 al:26
......................................................AAAGAAGUACAAGUGGUAu...................... len:19 al:218
......................................................AAAGAAGUAuAAGUGGUAGGGA................... len:22 al:1
......................................................AAAGAAGUACAAGcGGUAGGGA................... len:22 al:2
......................................................AAAGAAGUACAAGUGGUcGGG.................... len:21 al:3
......................................................AuAGAAGUACAAGUGGUAG...................... len:19 al:6
......................................................AgAGAAGUACAAGUGGUAGGG.................... len:21 al:47
......................................................AAAGAAGUACAuGUGGUAGGG.................... len:21 al:3
......................................................AAcGAAGUACAAGUGGUAG...................... len:19 al:81
......................................................AAuGAAGUACAAGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGUAc...................... len:19 al:252
......................................................AgAGAAGUACAAGUGGUA....................... len:18 al:2
......................................................AAAGAgGUACAAGUGGUAGG..................... len:20 al:5
......................................................AAAGAAGUACAAGaGGUAGG..................... len:20 al:2
......................................................AAAGAAGUACAAGUGGUAGGu.................... len:21 al:831
......................................................AAAGAAGUACAAGUGGUAGGGAu.................. len:23 al:10
......................................................AAAGAAGUACAAGUGGgAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGUAGu..................... len:20 al:184
......................................................AAAGAAGUACAgGUGGUAGG..................... len:20 al:6
......................................................AAAGAAGUACAAGUGGUuGGG.................... len:21 al:12
......................................................AAAGAAGcACAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAuGUGGUAG...................... len:19 al:3
......................................................AAAGAAGUACAAGUGGUuGGGA................... len:22 al:1
......................................................AAAGAAGUACAAGUGaUAGG..................... len:20 al:2
......................................................AAAGAAGUACcAGUGGUAGGG.................... len:21 al:2
......................................................AAAGAAGUACAAuUGGUAGGGA................... len:22 al:1
......................................................AcAGAAGUACAAGUGGUA....................... len:18 al:2
......................................................AAAGAAGUACAAGUGGUAGGG.................... len:21 al:10405
......................................................AAAGAAGUACcAGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUgCAAGUGGUAGG..................... len:20 al:11
......................................................AAAGAAGUACAAGUGGUAGc..................... len:20 al:40
......................................................AAAGAAuUACAAGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGUAGGa.................... len:21 al:4886
......................................................AAuGAAGUACAAGUGGUAG...................... len:19 al:4
......................................................AAAGAAGcACAAGUGGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGUAGGGcG.................. len:23 al:2
......................................................AgAGAAGUACAAGUGGUAGGGA................... len:22 al:4
......................................................AAAaAAGUACAAGUGGUAGGG.................... len:21 al:4
......................................................AAuGAAGUACAAGUGGUAGGG.................... len:21 al:2
......................................................AAAGAAGUACAAGUGGUAGGGAG.................. len:23 al:1
......................................................AAAGAAGUgCAAGUGGUAGGGA................... len:22 al:4
......................................................AAAGAAGUACAAGUGuUAGG..................... len:20 al:1
......................................................AAgGAAGUACAAGUGGUAG...................... len:19 al:18
......................................................AAAGAAGUgCAAGUGGUAGGG.................... len:21 al:28
......................................................AAAGAAGUACAAGUGGa........................ len:17 al:2
......................................................AAAGAAGUACAAGUGGUAGa..................... len:20 al:922
......................................................AAAGAAGUAuAAGUGGUAGG..................... len:20 al:2
......................................................AcAGAAGUACAAGUGGUAG...................... len:19 al:10
......................................................AAAGAgGUACAAGUGGUAGGG.................... len:21 al:34
......................................................AuAGAAGUACAAGUGGUAGGG.................... len:21 al:7
......................................................AAAuAAGUACAAGUGGUAGGG.................... len:21 al:1
......................................................AAAGAAGUACAAGUGGUAGGGuG.................. len:23 al:7
......................................................AAAGAAGUuCAAGUGGUAGG..................... len:20 al:2
......................................................AAAGAAGUACAAGUGGUAGGGu................... len:22 al:2850
......................................................AAAGgAGUACAAGUGGUAGG..................... len:20 al:3
......................................................AAcGAAGUACAAGUGGUA....................... len:18 al:15
......................................................AAAGAAGUACAAGUGGUAaG..................... len:20 al:19
......................................................AAAGAAGUACAAGUGGcAGG..................... len:20 al:7
......................................................AAAGAAGUACAAGUGGUAGGGg................... len:22 al:100
......................................................AAAGAAGUACAAaUGGUAGGG.................... len:21 al:6
......................................................AAAGAAGUACAAcUGGUAGGG.................... len:21 al:1
......................................................AAAGAAGUACAAGUGGcAGGG.................... len:21 al:12
......................................................AAAGAAGUACAAGUGGUgGG..................... len:20 al:12
......................................................AAAGAAGUACAAGUGGgAG...................... len:19 al:1
......................................................AAAGAAGUACAAGUGGUAa...................... len:19 al:1494
......................................................AAgGAAGUACAAGUGGUAGGGA................... len:22 al:3
......................................................AAAGAAGUACAAaUGGUAG...................... len:19 al:2
......................................................AAAGAAGUACAAGUGGcAG...................... len:19 al:6
......................................................AAAGAAGUACAAGaGGUAG...................... len:19 al:1
......................................................AAAGAAGUACAAGUGGUAuGG.................... len:21 al:5
......................................................AAAGgAGUACAAGUGGUAGGG.................... len:21 al:35
......................................................cAAGAAGUACAAGUGGUAGG..................... len:20 al:22
......................................................AAAGAAGUACgAGUGGUAGGGA................... len:22 al:3
......................................................AAAGAAGUACAAGgGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGUGGUAGGGA................... len:22 al:751
......................................................AAAGAAGUACAAGUGGUAGGc.................... len:21 al:186
......................................................AuAGAAGUACAAGUGGUAGG..................... len:20 al:4
......................................................AAcGAAGUACAAGUGGUAGGGA................... len:22 al:15
......................................................AAAGAAGUACAAGUGGUgGGG.................... len:21 al:44
......................................................AAAGAAGUACAAGUGGgAGGG.................... len:21 al:2
......................................................AAAGAAGUACAAGUGGcA....................... len:18 al:6
......................................................AAAGAAGUuCAAGUGGUAGGG.................... len:21 al:5
......................................................AAAGAAGUACAAGUaGUAG...................... len:19 al:7
......................................................AAAGAAGUACAAGUGGUAG...................... len:19 al:5470
......................................................AAAGAAGUAuAAGUGGUAGGG.................... len:21 al:7
......................................................AAAGgAGUACAAGUGGUA....................... len:18 al:1
......................................................AAAGAAGUACAAGgGGUAG...................... len:19 al:3
......................................................AAAGAAGUACuAGUGGUAGGG.................... len:21 al:5
......................................................AAAGAAGUACAgGUGGUAGGGA................... len:22 al:3
......................................................AAAGAAGUACAgGUGGU........................ len:17 al:2
......................................................AAAGAAGUACAgGUGGUAGGG.................... len:21 al:33
......................................................AAAGAAGUcCAAGUGGUAGGG.................... len:21 al:2
......................................................AgAGAAGUACAAGUGGUAGG..................... len:20 al:13
......................................................AAAGAAGUACAAGUGcU........................ len:17 al:1
......................................................AAAGAAGUgCAAGUGGUAG...................... len:19 al:72
......................................................AAAGAAGUACAcGUGGUAG...................... len:19 al:1
......................................................AAAGAgGUACAAGUGGUA....................... len:18 al:2
......................................................AAAGAAGUACAAGUaGUAGG..................... len:20 al:1
......................................................AAAGAAGUACAAGUGGUAGaGA................... len:22 al:1
......................................................AAAGAAuUACAAGUGGUAG...................... len:19 al:2
......................................................AAAGAgGUACAAGUGGUAGGGA................... len:22 al:2
......................................................AAAaAAGUACAAGUGGUAG...................... len:19 al:1
......................................................AAAGAAGgACAAGUGGUAGGG.................... len:21 al:1
......................................................AAAGAAGUACAAGUGGUgG...................... len:19 al:31
......................................................AAAGAAGUACAAGUGGg........................ len:17 al:2
......................................................AAAGgAGUACAAGUGGUAG...................... len:19 al:21
......................................................AAAGAAGUACAAGcGGUAGG..................... len:20 al:1
......................................................AAAGAAGUgCAAGUGGU........................ len:17 al:1
......................................................AAAGAAGUACAAGUGGUA....................... len:18 al:605
......................................................AAcGAAGUACAAGUGGUAGG..................... len:20 al:43
.......................................................uAGAAGUACAAGUGGUAGGG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUAGGG.................... len:20 al:9
.......................................................AAGAAGUACAAGUGGUAG...................... len:18 al:6
.......................................................AAaAAGUACAAGUGGUAGGG.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUAGGc.................... len:20 al:1
.......................................................AAGAAGUACAAGUGGUAGG..................... len:19 al:1
.......................................................AAGAAGUACAAGUGGUAa...................... len:18 al:3
.......................................................AAGAAGUACAAGUGGUAGGu.................... len:20 al:1
........................................................AGAAGUACAAGUGGUAGGGc................... len:20 al:2
........................................................AGAAGUACAAGUGGUAG...................... len:17 al:1
........................................................AGAAGUACAAGUGGUAGGG.................... len:19 al:16
........................................................AGAAGUACAAGUGGUAGGGA................... len:20 al:1
........................................................AGAAGUACAAGUGGUAGGGu................... len:20 al:2
........................................................uGAAGUACAAGUGGUAGGG.................... len:19 al:1
.........................................................aAAGUACAAGUGGUAGGG.................... len:18 al:1
.........................................................GAAGUACAAGUGGUAGGG.................... len:18 al:3
..........................................................AAGUACAAGUGGUAGGGc................... len:18 al:1
..........................................................AAGUACAAGUGGUAGGGu................... len:18 al:1