Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/E-Peve/output/08.2-Peve-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_1159:7406-7500 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/E-Peve/output/08.2-Peve-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_9992.ps
Locus Name: Cluster_9992
AUAAUUAAUUUAUUCAUUGUAGUAAGGUUGUUGUUGCUUAAAACUAUUUGAAUUUUAAACAACAAUUACCUUUCUUUUAUGAAUGAAACAUUGCU
........(((((((((...((.(((((.(((((((.((((((.........)))))).))))))).))))).))...)))))))))........ (-23.40)
..AAUUAAUUUAUUCAUUGUAG......................................................................... len:20 al:1
...AUUAAUUUAUUCAUUGUAG......................................................................... len:19 al:5
.....UAAUUUAUUCAUUGUAG......................................................................... len:17 al:1
....................AGUAAGGUUGUUGgUGCU......................................................... len:18 al:2
.....................GUAAGGUUGUUGUUGCUUAAAA.................................................... len:22 al:16
.....................GUAAGGUUGUUGUUGCUUAAAuC................................................... len:23 al:1
.....................GUAAGGUUGUUGgUGCUUAAAA.................................................... len:22 al:25
.....................GUAAGGUUGUUGUUGCUUAAAu.................................................... len:22 al:2
.....................GUAAGGUUGUUGUUGCgU........................................................ len:18 al:1
.....................GUAAGGUUGUUGgUGCUUA....................................................... len:19 al:1
.....................GUAAGGUUGUUGUUGCUUAAAACa.................................................. len:24 al:2
.....................GUAAGGUUGUUGUUGCUUAAAAu................................................... len:23 al:10
.....................GUAAGGUUGUUGgUGCUUAAAACU.................................................. len:24 al:7
.....................GUAAGGUUGUUGgUGCUU........................................................ len:18 al:17
.....................GUAAGGUUGUUGgUGCUUAA...................................................... len:20 al:3
.....................GUAAGGUUGUUGUUGCUUAAAACU.................................................. len:24 al:7
.....................GUAAGGUUGUUGUUGCUU........................................................ len:18 al:4
.....................GUAAGGUUGUUGUUGCUUAAAg.................................................... len:22 al:1
.....................GUAAGGUUGUUGUUGCUUAAAACUAUUU.............................................. len:28 al:2
.....................GUAAGGUUGUUGUUGCU......................................................... len:17 al:1
.....................GUAAGGUUGUUGUUGCUUAAAAC................................................... len:23 al:1
.....................GUAAGGUUGUUGgUGCUUAAA..................................................... len:21 al:3
.....................GUAAGGUUGUUGgUGCUUAAAAC................................................... len:23 al:13
......................UAAGGUUGUUGUUGCUUAAAACUu................................................. len:24 al:8
......................UAAGGUUGUUGUUGCUUu....................................................... len:18 al:5
......................UAAGGUUGUUGUUGCUUAAgACU.................................................. len:23 al:4
......................UAAGGUUGUUGUaGCUUAAAACU.................................................. len:23 al:2
......................UAAGGUUGUUGUcGCUUAAAACU.................................................. len:23 al:2
......................UAAGGUUGUUGgUGCUUAA...................................................... len:19 al:23
......................UgAGGUUGUUGUUGCUUAAAACUAUUUGAAU.......................................... len:31 al:1
......................UAAGGUUGUUGUUGCUUAgAACU.................................................. len:23 al:2
......................UAAGGUUGUUGUUGCUUAAAACg.................................................. len:23 al:10
......................UAAGGUUGUUGUUGCUUAAAAaUA................................................. len:24 al:1
......................UAAGGUUGUUGUUGCUcAAAACU.................................................. len:23 al:1
......................UAAGGUUGUUGUUGCUUgAAACU.................................................. len:23 al:1
......................UAAGGUUGUUGUUGCUUAAAc.................................................... len:21 al:2
......................UAAGGUUGUUGUUGCUUAAc..................................................... len:20 al:1
......................UAAGGUcGUUGUUGCUUAAAAC................................................... len:22 al:1
......................UAAGGUUGUUGUUGCUUAAAu.................................................... len:21 al:28
......................UAgGGUUGUUGUUGCUUAAAACU.................................................. len:23 al:8
......................UAAGGUUGUUGUUGCUUAAAACUAUUUGAAU.......................................... len:31 al:9
......................UAAGGUUGUUGUUGCUUAu...................................................... len:19 al:4
......................UAAaGUUGUUGUUGCUUAAAACU.................................................. len:23 al:1
......................UgAGGUUGUUGUUGCUUAAAACU.................................................. len:23 al:3
......................UAAGGUUGUUGUUGCUUAAAcCU.................................................. len:23 al:4
......................UAAGGUUGUUGUUGCUUAAAACUAUUUGAc........................................... len:30 al:1
......................UAAGGUUGUUGUUGCU......................................................... len:16 al:4
......................UAAGGUUGUUGUUGCUUAAAAaU.................................................. len:23 al:4
......................UAAGGUUGUUGUUGCUUAAAgCU.................................................. len:23 al:7
......................UAAGGUUGUUGUUGCcUAAAACU.................................................. len:23 al:7
......................UAAGGUUGUcGUUGCUUAAAACU.................................................. len:23 al:13
......................UAAGGUUGUUGgUGCUU........................................................ len:17 al:5
......................UAAGGUUGUUGUUGCUUAAAACUAUUUGAu........................................... len:30 al:1
......................UAAGGUUGUUGgUGCUUA....................................................... len:18 al:42
......................UAAGGUUGUUGUUGCUUAAAAC................................................... len:22 al:42
......................UAAGGUUGUUaUUGCUUAAAACU.................................................. len:23 al:1
......................UAAGGUUGcUGUUGCUUA....................................................... len:18 al:1
......................UAAGGUUGUUGUUGCUUAgA..................................................... len:20 al:1
......................UAAGGUUGUUGUUGCUUAAAACUAUUUu............................................. len:28 al:3
......................cAAGGUUGUUGUUGCUUAAAAC................................................... len:22 al:1
......................UAAGGUUGUgGUUGCUUAAAACU.................................................. len:23 al:1
......................UAAGGUUGcUGUUGCUUAAAACU.................................................. len:23 al:2
......................UAAGGUUGUUGUUGCcUAAAACUAUUUGAAU.......................................... len:31 al:1
......................UAAuGUUGUUGUUGCUUAAAACU.................................................. len:23 al:2
......................UAAGGUUGUUGUUGCUUA....................................................... len:18 al:10
......................aAAGGUUGUUGUUGCUUAAAACU.................................................. len:23 al:3
......................UAAGGUUGUUGgUGCUUAAAACUA................................................. len:24 al:1
......................UAAGGUUGUUGUUGCUUAAu..................................................... len:20 al:12
......................UAAGGUUGUUGUUGCUUAAAACc.................................................. len:23 al:154
......................UAAGGUUGUUGUUGCUU........................................................ len:17 al:1
......................UAAGGUUGUUGUUGCUUAAAA.................................................... len:21 al:20
......................UAAGGUUGUUGUUGuUUAAAACU.................................................. len:23 al:2
......................cAAGGUUGUUGUUGCUUAAAACU.................................................. len:23 al:11
......................UAAGGUUGUUGUUGCUUAAAAuU.................................................. len:23 al:3
......................UAAGGUUGUUGgUGCU......................................................... len:16 al:3
......................UAAGGUUGUUGUUGCUUAA...................................................... len:19 al:13
......................UAAGGUUGUUGgUGCUUAAAAC................................................... len:22 al:53
......................UAAGGUUGUUGgUGCUUAAAA.................................................... len:21 al:32
......................UAAGGUUGUUGgUGCUUAAAACU.................................................. len:23 al:843
......................UAAGGUUGUUGUUGCUUAAAAg................................................... len:22 al:1
......................UAAGGUUGUUGUUGCUaAAAACU.................................................. len:23 al:1
......................UAAGGUUGUUGUUGCUUAAA..................................................... len:20 al:67
......................UAAGGUaGUUGUUGCUUAAAACU.................................................. len:23 al:2
......................UAAGGUUGUUGgUGCUUAAA..................................................... len:20 al:71
......................UAAGGUUGUUGgUGCUUAAAACUAUUUGAAU.......................................... len:31 al:10
......................UAAGGUUGUUGUUGCUUAAAACa.................................................. len:23 al:33
......................UAAGGUUGUUGUUGCUUAAAuC................................................... len:22 al:1
......................UAAGGUUGUUGUUGCUUAAAAu................................................... len:22 al:12
......................UAAGGUcGUUGUUGCUUAAAACU.................................................. len:23 al:6
......................UAAGGUUGUUGUUGCUUAAAACU.................................................. len:23 al:1471
......................UAAGGUUGUUGUUGCUUAAAAa................................................... len:22 al:3
......................UAAGGUUGUUGcUGCUUAAAACU.................................................. len:23 al:6
......................UAAGGcUGUUGUUGCUUAAAACU.................................................. len:23 al:7
......................UAAGGUUGUUGgUGC.......................................................... len:15 al:1
......................UAAGGUUaUUGUUGCUUAAAACU.................................................. len:23 al:1
......................UAAGGUUGUUGUUGCUUAAuACU.................................................. len:23 al:1
.......................AAGGUUGUUGgUGCUUAAAACUAUUUGAAU.......................................... len:30 al:1
........................AGGUUGUUGUUGCUUAAAACc.................................................. len:21 al:2
........................AGGUUGUUGgUGCUUAAAA.................................................... len:19 al:13
........................AGGUUGUUGUUGCUUAAAACU.................................................. len:21 al:20
........................AGGUUGUUGUUGCUUAAAACa.................................................. len:21 al:2
........................AGGUUGUUGUUGCUUAAAAC................................................... len:20 al:2
........................AGGUUGUUGgUGCUUAAAAC................................................... len:20 al:10
........................AGGUUGUUGUUGCUUAAAu.................................................... len:19 al:6
........................AGGUUGUUGgUGCUUAAAACU.................................................. len:21 al:5
.........................GGUUGUUGgUGCUUAAAACU.................................................. len:20 al:14
.........................GGUUGUUGUUGCUUAAAAu................................................... len:19 al:3
.........................GGUUGUUGgUGCUUAAAACUA................................................. len:21 al:1
.........................GGUUGUUGUUGCUUAAAACU.................................................. len:20 al:2
..........................GUUGUUGUUGCUUAAAACU.................................................. len:19 al:2
............................................UAUUUGAAUUUUAAACAACAAUUACCUUU...................... len:29 al:1
.............................................AUUUGAAUUUUAAACAACAAUUACCUUUCU.................... len:30 al:3
.............................................AUUUGAAUUUUAAACAACAAUUACCUUUCg.................... len:30 al:1
....................................................UUUUAAACAACAAUUACCU........................ len:19 al:1
....................................................UUUUAAACAACAAUUACCUUUCUUUUu................ len:27 al:3
....................................................UUUUAAACAcCAAUUACCUUUCU.................... len:23 al:1
....................................................UUUUAAACAACAAUUACCUUUCg.................... len:23 al:5
....................................................UUUaAAACAACAAUUACCUUUCU.................... len:23 al:1
....................................................UUUUgAACAACAAUUACCUUUCU.................... len:23 al:2
....................................................UUUUAAACAACAAUUACCUUUa..................... len:22 al:1
....................................................UUUUAAACAACAAcUACCUUU...................... len:21 al:2
....................................................UUUUAAACgACAAUUACCUUUCU.................... len:23 al:75
....................................................UUUUAAACAACAAUUACCUUUCUUUU................. len:26 al:4
....................................................UUUUAgACAACAAUUACCUUUCU.................... len:23 al:3
....................................................UUUUAAACgACAAUUACC......................... len:18 al:1
....................................................UUUUAAACAACAAUUACCUUUuUU................... len:24 al:3
....................................................UUUUAAACAACAAUUACCUUUaU.................... len:23 al:2
....................................................UUUUAAACgACAAUUACCUUUCUU................... len:24 al:6
....................................................UUUUAAACAACAAUUACCUUUuU.................... len:23 al:2
....................................................UUUUAAACAACAAUUACCgU....................... len:20 al:1
....................................................UUUUAAACAACAAUUACCUUUCUc................... len:24 al:1
....................................................UUUUAAACAACAAUUACCaUUCU.................... len:23 al:1
....................................................UUUUAAACAACAAUUACCUUcCU.................... len:23 al:2
....................................................UUUUAAACAAuAAUUACCUUU...................... len:21 al:1
....................................................UcUUAAACAACAAUUACCUUUCU.................... len:23 al:1
....................................................UUUUAAACAgCAAUUACCUUU...................... len:21 al:2
....................................................UUUUAAACAACAAUUACCUUUCU.................... len:23 al:548
....................................................UUUUAAACAACAAUUACCUUc...................... len:21 al:5
....................................................UUUUAAACAACAAUUACCUUUCUUU.................. len:25 al:6
....................................................UUUUAAACAACAAUUgCCUUUCU.................... len:23 al:1
....................................................UUUUAAACAACAAUUACCcUUCU.................... len:23 al:5
....................................................UUUUAAACAACAAUUACCUUUCc.................... len:23 al:66
....................................................UUUUAAACAACAAUUAuCUUUCU.................... len:23 al:1
....................................................UUUUAAACAACAAUUACCUU....................... len:20 al:11
....................................................UUUUAAACAACAAUUACCUUUCUaU.................. len:25 al:3
....................................................UUUUAAACgACAAUUACCUUUCUUU.................. len:25 al:6
....................................................UUUUAAACAACAAUUACCUUUCUU................... len:24 al:11
....................................................UUUUAAACAACAAUUACCUUUCaU................... len:24 al:2
....................................................UUUUAAACAACAAUUACCUUUaUU................... len:24 al:1
....................................................UUUUAAACAACAAUUACuUUUCU.................... len:23 al:1
....................................................UUUUAAACAACAAUUACCUUU...................... len:21 al:117
....................................................UUUUAAACAACAAUUACCUaUCU.................... len:23 al:1
....................................................UUUUAAACgACAAUUACCUUUC..................... len:22 al:10
....................................................UUUUAAACgACAAUUACCUUU...................... len:21 al:26
....................................................UUUUAAACAACAAUUACCUUUC..................... len:22 al:41
....................................................UUUUAAACAACAAaUACCUUUCU.................... len:23 al:1
....................................................UUUUAAACAACAAUUACCUUUCa.................... len:23 al:6
....................................................UUUUAAACAACAgUUACCUUUCU.................... len:23 al:1
....................................................UUUUAAACAACAAUUACCUgU...................... len:21 al:2
....................................................UUUUAAACgACAAUUACCUU....................... len:20 al:2
....................................................UUUUAAACAACAAUUAaCUUUCU.................... len:23 al:1
....................................................UUcUAAACAACAAUUACCUUU...................... len:21 al:1
....................................................UUUUAAACuACAAUUACCUU....................... len:20 al:2
....................................................UUcUAAACAACAAUUACCUUUCU.................... len:23 al:2
....................................................gUUUAAACAACAAUUACCUUU...................... len:21 al:1
....................................................UcUUAAACAACAAUUACCUUUC..................... len:22 al:1
....................................................cUUUAAACAACAAUUACCUUUCU.................... len:23 al:10
....................................................UUUUgAACAACAAUUACCUUUCUUU.................. len:25 al:2
.....................................................UUUAAACAACAAUUACCUUUCUUc.................. len:24 al:1
.....................................................UUUAAACAACAAUUgCCUUUC..................... len:21 al:1
.....................................................UUUAAACAACAAUUACCUUUC..................... len:21 al:2
.....................................................UUUAAACAACAAUUACCUUUCc.................... len:22 al:2
.....................................................UUUAAACAACAAUUACCUUUCUU................... len:23 al:4
.....................................................UUUAAACAACAAUUACCUUUCUUU.................. len:24 al:1
.....................................................UUUAAACgACAAUUACCUUUCU.................... len:22 al:3
.....................................................UUUAAACAACAAUUACCUUUCU.................... len:22 al:42
.....................................................UUUAAACAACAAUgACCUUUCU.................... len:22 al:1
......................................................UUAAACAACAAUUACCUUUCUUc.................. len:23 al:1
......................................................UUAAACgACAAUUACCUUUCUUUU................. len:24 al:1
......................................................UUAAACAACAAUUACCUUU...................... len:19 al:26
......................................................UUAAACAACAAcUACCUUUCU.................... len:21 al:5
......................................................UUAAACAACAAUUACCcU....................... len:18 al:1
......................................................UUAAACAACAAgUACCUUU...................... len:19 al:1
......................................................UUAAACAACAAUUACCUUUa..................... len:20 al:4
......................................................UUAAACAgCAAUUACCUUUCUUU.................. len:23 al:1
......................................................UUAAACAACAAUUACCUaU...................... len:19 al:1
......................................................aUAAACAACAAUUACCUUUCU.................... len:21 al:1
......................................................UUAAACAACAAUUgCCUUUCUUU.................. len:23 al:1
......................................................UUAAACAACAAUUACCUUUCUUa.................. len:23 al:2
......................................................UUAAACAACAAUUACCcUUCU.................... len:21 al:5
......................................................UUAAACAACAAUUACCUUUCUc................... len:22 al:2
......................................................cUAAACAACAAUUACCUUUCU.................... len:21 al:1
......................................................UUAAACgACAAUUACCUUUCUU................... len:22 al:1
......................................................UUAAACAACAAUUACCUUUCUUUU................. len:24 al:5
......................................................UUAgACAACAAUUACCUUUCUU................... len:22 al:1
......................................................UUAAACAACAAUUACCUUUCg.................... len:21 al:8
......................................................UUAAACAACAAUUACCUUUCc.................... len:21 al:76
......................................................UcAAACAACAAUUACCUUUCU.................... len:21 al:1
......................................................UUAAACAACAAUUACCUUUCUUU.................. len:23 al:41
......................................................UUAAACAACAgUUACCUUUCU.................... len:21 al:6
......................................................UUAAACAACAAUUACCUUUCa.................... len:21 al:22
......................................................UUAAACAACAAUUACCUUUCUUUUu................ len:25 al:4
......................................................UUAAACAACAAUUACCUUc...................... len:19 al:1
......................................................UUAAACAACAAUUACCUUUuU.................... len:21 al:1
......................................................UUAAgCAACAAUUACCUUUCU.................... len:21 al:9
......................................................UUAAACAACAAUUACCUUUCUUaU................. len:24 al:9
......................................................UUAAACAACAAUUACCUUUCUaUUA................ len:25 al:3
......................................................UUAAACAuCAAUUACCUUUCU.................... len:21 al:1
......................................................UUAAACAACAAUUACCUUUC..................... len:20 al:45
......................................................UUAAACAACAAUUACCUUUCUaU.................. len:23 al:563
......................................................UUAAACAACAAUUACCUUUCUaUUAU............... len:26 al:14
......................................................UUAAACAACAAUUACCUUcC..................... len:20 al:1
......................................................UUAAACAACAAUUACCUUUaU.................... len:21 al:1
......................................................UUAAACAACAAUUgCCUUUCU.................... len:21 al:2
......................................................UUAAACAACAAUUACCUUUCUUg.................. len:23 al:1
......................................................UUAAACAACAAUUACCUUUCaU................... len:22 al:2
......................................................UUAAgCAACAAUUACCUUUCUUU.................. len:23 al:1
......................................................UUAAACAACAAUUACCUUUCUaUU................. len:24 al:168
......................................................UUgAACAACAAUUACCUUUCU.................... len:21 al:1
......................................................UUAAACAACAAUUACCUUUCgU................... len:22 al:1
......................................................UUAAACAACAAUUACCUUUCUcU.................. len:23 al:3
......................................................UUAAACAACAAUUACCUUUCUUUc................. len:24 al:2
......................................................UUAAACAACAAUcACCUUUCU.................... len:21 al:2
......................................................UUAAACAACAAUUACCaUUCUU................... len:22 al:1
......................................................UUAgACAACAAUUACCUUUCU.................... len:21 al:5
......................................................UUAAACAACAAcUACCUUUC..................... len:20 al:1
......................................................UUAAACAACAAUUACCUUUuUU................... len:22 al:6
......................................................UUAAACAACAAUUACCUUUCaUUU................. len:24 al:1
......................................................UUAAACAACAAUUACCUUUCUU................... len:22 al:45
......................................................UUAAACAACAAUUgCCUUUCUU................... len:22 al:1
......................................................UUAAACAACAAUUACCUUUCU.................... len:21 al:909
......................................................UUAAACAACAAUUACCUU....................... len:18 al:12
......................................................UUAAAuAACAAUUACCUUUCU.................... len:21 al:2
......................................................UUAAACAACAAUcACCUUUC..................... len:20 al:1
......................................................UUAAACAACAAUUACCUUUCUgU.................. len:23 al:6
.......................................................UAAACAACAAUUACCUUUCUUaU................. len:23 al:2
.......................................................UAAACAACAAUUACCUUUCUaUU................. len:23 al:2
.......................................................UAAACAACAAUUACCUUUCUgU.................. len:22 al:1
.......................................................UAAACAACAAUUACCUUUCc.................... len:20 al:1
.......................................................UAAACAACAAUUACCUUUC..................... len:19 al:2
.......................................................UAAACAACAAUUACCUUUCUU................... len:21 al:2
.......................................................UAAACAACAAUUACCUUUCgU................... len:21 al:1
.......................................................UAAACAACAAUUACCUUUCUaU.................. len:22 al:15
.......................................................UAAACAACAAUUACCUUUCU.................... len:20 al:15
.......................................................UAAACAACAAUUACCUUUCa.................... len:20 al:1
........................................................AAACAACAAUUACCUUUCUUUU................. len:22 al:8
........................................................AAACAACAAUUACCUUUCU.................... len:19 al:2
........................................................AAACAACAAUUACCUUUCUaUU................. len:22 al:1
........................................................AAACAACAAUUACCUUUCUUUc................. len:22 al:3