Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/E-Peve/data/Porites_evermanni_v1.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/E-Peve/output/08.2-Peve-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: Porites_evermani_scaffold_910:139331-139420 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/E-Peve/output/08.2-Peve-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_8828.ps
Locus Name: Cluster_8828
AGAAGACUGGGCGAUGCGGGUCAAAUGUUUCGGCUUGUUCCCGUUUCAGAGAACAAGCCGAAGCAUUUGACUUUUGUCUGCCAAUAUUAC
.........(((((((.(((((((((((((((((((((((.(......).))))))))))))))))))))))).)))).)))........ (-45.30)
AGAAGACUGGGCGgUGCGGGUC.................................................................... len:22 al:1
AGAAGACUGGGCGAUGCGGGUC.................................................................... len:22 al:6
.GAAGACUGGGCGAUGCGGGUC.................................................................... len:21 al:2
..AAGACUGGGCGAUGCGGGUC.................................................................... len:20 al:7
..AAGACUGGGCGAUGCGGGUu.................................................................... len:20 al:2
....................UCAAAUGUUUCGGCUUGUUCCCu............................................... len:23 al:3
.....................aAAAUGUUUCGGCUUGUUCCC................................................ len:21 al:1
.....................CAAAUGUUUCGGCUUGUUCCCcU.............................................. len:23 al:1
.....................CAAAUGUUUCGGCUUGUUCCu................................................ len:21 al:1
.....................CAAAUGUUUCGGCUUGUUCCCc............................................... len:22 al:1
.....................CAAAUGUUUCGGCUUGUUCCCu............................................... len:22 al:10
.....................CAAAUGUUUCGGCUUGUUCCCa............................................... len:22 al:1
.....................CAAAUGUUUCGGCUUGUUCCC................................................ len:21 al:2
......................AAAUGUgUCGGCUUGUUCCC................................................ len:20 al:1
......................AAAUGUUUCGGCUUGUUCCu................................................ len:20 al:3728
......................AAAUGUUUCGGCUUGUUCCCa............................................... len:21 al:79
......................AAAUGUUUCGGCUUGUU................................................... len:17 al:40
......................AAAUGUUUCGGCUUGUUCuC................................................ len:20 al:10
......................AAgUGUUUCGGCUUGUUCC................................................. len:19 al:4
......................AAAUGUUUCGGCUUGUUCCCGU.............................................. len:22 al:2
......................AAAUGUUUCGaCUUGUUCCC................................................ len:20 al:7
......................AAAUGUUUCGGCUUGUUa.................................................. len:18 al:37
......................AAAUGUUUCGGCUUGUcCC................................................. len:19 al:4
......................AAAUGUUUCGGCUUGUUCC................................................. len:19 al:1183
......................AAAUGUUUCGGCcUGUUCC................................................. len:19 al:2
......................AAAUGUUUCGGCUUGgUCCC................................................ len:20 al:1
......................AAAUGUUUCGGCUUGUcCCC................................................ len:20 al:28
......................AAAUGUUUCGGCUUGUUCCCGUU............................................. len:23 al:3
......................AAAUGUUUCGGCUUGcUC.................................................. len:18 al:1
......................AAAUGUUUaGGCUUGUUCCC................................................ len:20 al:3
......................AAAUGUUUCGGCUcGUUCC................................................. len:19 al:3
......................AAAUGUcUCGGCUUGUUCC................................................. len:19 al:4
......................AAAUGUUcCGGCUUGUUC.................................................. len:18 al:1
......................AAAUGUUUCGGCUUGUUuCC................................................ len:20 al:6
......................AAAUGUcUCGGCUUGUU................................................... len:17 al:1
......................AAAUGUUUCGGCUUGUUu.................................................. len:18 al:657
......................AAAUGUUUCGGCUUGgUC.................................................. len:18 al:1
......................AAAUGUUUCGGCUUGUUCaC................................................ len:20 al:4
......................AAAUGUUUCGGgUUGUUCCC................................................ len:20 al:3
......................AAAUGUUUCGaCUUGUU................................................... len:17 al:1
......................AAAUGcUUCGGCUUGUUCCC................................................ len:20 al:19
......................AAAUGUUUCaGCUUGUUCCC................................................ len:20 al:10
......................AAAUGUUUCGGCUUGUUCCCG............................................... len:21 al:63
......................AAAUGUUUuGGCUUGUUC.................................................. len:18 al:1
......................AAAUGUUUCGGCUUGUUCCCu............................................... len:21 al:1235
......................AAAUGUaUCGGCUUGUUCCC................................................ len:20 al:1
......................AAAUGUUUCGGCUUGUcC.................................................. len:18 al:3
......................AAAUGUUUuGGCUUGUUCCC................................................ len:20 al:7
......................AAAUGUUUCGGCUUGcUCC................................................. len:19 al:6
......................AAgUGUUUCGGCUUGUUCCC................................................ len:20 al:35
......................AAAUGUUUCGGCUUGUUCg................................................. len:19 al:20
......................AAAUaUUUCGGCUUGUUCCC................................................ len:20 al:5
......................AAAUuUUUCGGCUUGUUCC................................................. len:19 al:1
......................AAAUGUUUCGGCUUGUUCCCuUU............................................. len:23 al:32
......................AAAUGUUUCGuCUUGUUCCC................................................ len:20 al:1
......................AAAUGUUUCGGCUUGUgCCC................................................ len:20 al:2
......................AAAUGUUUCuGCUUGUUCC................................................. len:19 al:1
......................gAAUGUUUCGGCUUGUUCCC................................................ len:20 al:5
......................AAAUGUUUCGGCUUGUUuC................................................. len:19 al:12
......................AAAUGUUUCGGCUUGUUCCCcU.............................................. len:22 al:8
......................AAAUGUUgCGGCUUGUUCCC................................................ len:20 al:1
......................AAAUGUUUCGGCUUGaUCCC................................................ len:20 al:4
......................AAAUGUUUCGGCUUGUUCa................................................. len:19 al:782
......................AAAUGUUUCGGCUUGUUaC................................................. len:19 al:8
......................AAAUGUUUCGGCUUGUaC.................................................. len:18 al:1
......................AAAUGUUUCGGCUUGUUgC................................................. len:19 al:1
......................AAAUGUUUCGGCcUGUUCCC................................................ len:20 al:35
......................AAAUGUUUCGGCUaGUUCCC................................................ len:20 al:1
......................AAcUGUUUCGGCUUGUUCCC................................................ len:20 al:46
......................AAAUGUUUCGGCcUGUUC.................................................. len:18 al:3
......................AgAUGUUUCGGCUUGUUCCC................................................ len:20 al:50
......................AAgUGUUUCGGCUUGUUC.................................................. len:18 al:2
......................AAAUGUUUCGGCUcGUUC.................................................. len:18 al:1
......................AAuUGUUUCGGCUUGUUCCC................................................ len:20 al:1
......................AgAUGUUUCGGCUUGUUCC................................................. len:19 al:4
......................AAAUGUUUCGGCUUGUc................................................... len:17 al:5
......................AAAcGUUUCGGCUUGUUCCC................................................ len:20 al:19
......................AAAUGUUUCaGCUUGUUCC................................................. len:19 al:1
......................AAAUGUUcCGGCUUGUUCCC................................................ len:20 al:22
......................AAAUGUUUCGGCUgGUUCCC................................................ len:20 al:1
......................AAAUGUUUCGGCUUGUUCCCuUUU............................................ len:24 al:12
......................AAcUGUUUCGGCUUGUUC.................................................. len:18 al:8
......................AAAUGUUUCGGCUUGUUCCC................................................ len:20 al:9491
......................AAAUGUUUCGGuUUGUUCCC................................................ len:20 al:7
......................AAAUGUUUCGGCcUGUU................................................... len:17 al:2
......................AAAUGUUaCGGCUUGUUC.................................................. len:18 al:1
......................AAAUGUUUCGaCUUGUUCC................................................. len:19 al:3
......................AAAUGUUUCGGCaUGUUCCC................................................ len:20 al:3
......................AAAgGUUUCGGCUUGUUCCC................................................ len:20 al:1
......................AAAUGUUUCGGCUUuUUCC................................................. len:19 al:1
......................AAAUGUUUCGGCUUGcUCCC................................................ len:20 al:34
......................AAAUGUUUCGGCUUGUUCCCGUc............................................. len:23 al:1
......................AAAUGUUcCGGCUUGUUCCCG............................................... len:21 al:2
......................AAAUGUUUCGGCgUGUUCCC................................................ len:20 al:2
......................AAAUGUUUCGGCUUGUUgCC................................................ len:20 al:1
......................AAAUGUUUCGGCUUGUUCCCaU.............................................. len:22 al:1
......................AAAUGaUUCGGCUUGUUCCC................................................ len:20 al:1
......................AAAUuUUUCGGCUUGUUCCC................................................ len:20 al:1
......................AAAUGUUUCGGCUUGUUCu................................................. len:19 al:366
......................AAAUGUUUCGGuUUGUUCC................................................. len:19 al:4
......................AAAUGUUUCGGCUUGUUCCa................................................ len:20 al:450
......................AAAUGUcUCGGCUUGUUCCC................................................ len:20 al:21
......................AAAcGUUUCGGCUUGUUCC................................................. len:19 al:4
......................AAAUaUUUCGGCUUGUUCC................................................. len:19 al:2
......................AAAUGUUUCGGCUUGU.................................................... len:16 al:6
......................AAAUGUUUCGGCUUGUUCCCc............................................... len:21 al:231
......................gAAUGUUUCGGCUUGUUCC................................................. len:19 al:1
......................AAAUGUUUCGGCUUGUgC.................................................. len:18 al:1
......................AAAUGUUUCGGCUUuUUCCCG............................................... len:21 al:1
......................AAAUGUUUCGGCUUGUUC.................................................. len:18 al:964
......................AAAUGgUUCGGCUUGUUCCC................................................ len:20 al:2
......................AAAUGUUUCGaCUUGUUC.................................................. len:18 al:2
......................AAAgGUUUCGGCUUGUUC.................................................. len:18 al:1
......................AAAaGUUUCGGCUUGUUCCC................................................ len:20 al:1
......................AAAUGUUUCGGCUcGUUCCC................................................ len:20 al:25
......................AuAUGUUUCGGCUUGUUCCC................................................ len:20 al:2
......................AAAUGUUUCGGCUUG..................................................... len:15 al:1
......................gAAUGUUUCGGCUUGUUC.................................................. len:18 al:3
......................AAAUGUUUCGGCUUGUUCCg................................................ len:20 al:64
......................AAAUGUUUCGGCUUaUUCCC................................................ len:20 al:11
......................AAcUGUUUCGGCUUGUUCC................................................. len:19 al:9
......................AAAcGUUUCGGCUUGUUC.................................................. len:18 al:4
......................AAAUGUUUCGGCUUGUgCC................................................. len:19 al:1
......................AAAUGUUUCGGCUUGUaCC................................................. len:19 al:1
......................AAAUGUUUCGGCUUGUUCCCuU.............................................. len:22 al:47
.......................AAUGUUUCGGCUUGUUCa................................................. len:18 al:1
.......................AAUGUUUCGGCUUGUUCu................................................. len:18 al:2
.......................AAUGUUUCGGCUUGUUCCCuU.............................................. len:21 al:1
.......................AAUGUUUCGGCUUGUUCCu................................................ len:19 al:12
.......................AAUGUUUCGGCUUGUUC.................................................. len:17 al:1
.......................AAUGUUUCGGCUcGUUCC................................................. len:18 al:1
.......................AAUGUUUCGGCcUGUUCCCG............................................... len:20 al:1
.......................AAUGUUUCGGCUUGUUCCCc............................................... len:20 al:2
.......................AAUGUUUCGGCUUGUUCCCGUU............................................. len:22 al:5
.......................AAUGUUUCGGCUUGUUCCCu............................................... len:20 al:7
.......................AAUGUUUCGGCUUGUUCCCGU.............................................. len:21 al:1
.......................AAUGUUUCGGCUUGUUCCCuUUU............................................ len:23 al:2
.......................AAUGUUUCGGCUUGUUCCCuUU............................................. len:22 al:2
.......................AAUGUUUCGGCUUGUUCCg................................................ len:19 al:2
.......................AAUGUUUCGGCUUGUUCC................................................. len:18 al:8
.......................AAUGUUUCGGCUUGUU................................................... len:16 al:1
.......................AgUGUUUCGGCUUGUUCCCGU.............................................. len:21 al:2
.......................AAUGUUUCGGCUUGUUCCC................................................ len:19 al:25
.......................AAUGUUUCGGCUUGU.................................................... len:15 al:1
.......................AAUGUUUCGGCUUGUUCCCG............................................... len:20 al:9
........................AUGUUUCGGCUUGUUCCCGUU............................................. len:21 al:5
........................AUGUUUCGGCUUGUUCCC................................................ len:18 al:6
........................AUGUUUCGGCUUGUUCCCc............................................... len:19 al:1
........................AUGUUUCGGCUUGUUCCCGUc............................................. len:21 al:2
........................AUGUUUCGGCUUGUUCCCu............................................... len:19 al:1
........................AUGUUUCGGCUUGUUCCCG............................................... len:19 al:5
........................AUGUcUCGGCUUGUUCCCG............................................... len:19 al:1
........................AUGUUUCGGCUUGUUCCu................................................ len:18 al:1
.........................UGUUUCGGCUUGUUCCCGUU............................................. len:20 al:3
.........................UGUUUCGGCUUGUUCCCG............................................... len:18 al:3
.........................UGUUUCGGCUUGUUCCCGUc............................................. len:20 al:1
.........................UGUUUCGGCUUGUUCCCuUU............................................. len:20 al:6
.........................UGUUUCGGCUUGUUCCCGU.............................................. len:19 al:1
............................................UUCAGAGAACAAGCCGAAGC.......................... len:20 al:1
.............................................UCAGAGAACAAGCCGAAG........................... len:18 al:1
...............................................AGAGgACAAGCCGAAGCAUUUGA.................... len:23 al:1
...............................................AGAGAACAAGCCGAAGCAUUUGA.................... len:23 al:4
................................................GAGAACAAGCCGAAGCAU........................ len:18 al:10
.................................................AGAACAAGCCGAAGCAUU....................... len:18 al:11
.................................................AGAACAAGCCGAAGCAUUUGA.................... len:21 al:5
.................................................cGAACAAGCCGAAGCAUU....................... len:18 al:3
..................................................GAACAAGCCGAAGCAUUUGg.................... len:20 al:3
..................................................GAACAgGCCGAAGCAUUU...................... len:18 al:1
..................................................GAACAAGCCGAAGCAU........................ len:16 al:2
..................................................GAACAAGCCGAgGCAUUUGA.................... len:20 al:1
..................................................GAgCAAGCCGAAGCAUUUGA.................... len:20 al:1
..................................................GAACgAGCCGAAGCAUUU...................... len:18 al:2
..................................................GAACAAGCCGAAGCAUUU...................... len:18 al:45
..................................................GAACAAGCCGAAGCAUUc...................... len:18 al:1
..................................................GAACAAGCCGAAGCAUUUGAa................... len:21 al:10
..................................................GAACAgGCCGAAGCAUUUGA.................... len:20 al:1
..................................................GAAaAAGCCGAAGCAUUUGA.................... len:20 al:2
..................................................GAACAAGCCGAAGCAUUUGAu................... len:21 al:21
..................................................GAACAAGCCGAAGCAUUUGA.................... len:20 al:167
..................................................aAACAAGCCGAAGCAUUUGA.................... len:20 al:1
..................................................GAACAAGCCGAAGCAUUUGAaU.................. len:22 al:14
..................................................GAACAAGCCGAAGCAUaU...................... len:18 al:4
..................................................GAACAAGCCGAAGCAUUUG..................... len:19 al:19
..................................................GAACAAGCaGAAGCAUU....................... len:17 al:1
..................................................GAACAAGCCGAAGCgUUUGA.................... len:20 al:1
..................................................GAACAAGCCGAAGCAUUUGc.................... len:20 al:3
..................................................GAACAAGCCGAAGCAUUUGu.................... len:20 al:9
..................................................GAACAAGCCGAAGCAUU....................... len:17 al:17
..................................................GAACAAGCCGAAGCAUUUGAC................... len:21 al:4
..................................................GAACAAGCCGAAGCAcUUGA.................... len:20 al:1
..................................................GgACAAGCCGAAGCAUUUGA.................... len:20 al:2
...................................................AACAAGCCGAAGCAUUUGA.................... len:19 al:1