Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.2.1-Apul-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: NC_058073.1:11856121-11856215 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.2.1-Apul-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_6965.ps
Locus Name: Cluster_6965
AGUUUUGAAUGAAAUUGUAUUGGCUCUUUUAAGUAGUUGAAUAAUUAAAUUUACUCACUGCUUAAAAGAGUCACUACAGCUUUGUCUUACUUACA
........(((((.(((((.(((((((((((((((((.((.(((......))).))))))))))))))))))).))))).))))).......... (-30.20)
.GUUUUGAAUGAAAUUGUAgU.......................................................................... len:20 al:8
..UUUUGAAUGAAAUUGUAgU.......................................................................... len:19 al:72
...UUUGAAUGAAAUUGUAgU.......................................................................... len:18 al:13
.......AAUGAAAUUGUAgUGGCUCUUUUAAGUAGUU......................................................... len:31 al:1
..........GAAAUUGUAgUGGCUCUUUUAAGU............................................................. len:24 al:1
...........AAAUUGUAgUGGCUCUUUUAAGUAGUU......................................................... len:27 al:1
....................UGGCUCUUUUAAGUAGUUGAAUAAUU................................................. len:26 al:2
....................UGGCUCUUUUAAGUAGUUGAAU..................................................... len:22 al:4
....................UGGCUCUUUUAAGUAGUUGAAUAAa.................................................. len:25 al:1
....................UGGCUCUUUUAAGUAGUUGAAUA.................................................... len:23 al:9
....................UGGCUCUUUUAAGUAGUUGAAUc.................................................... len:23 al:1
....................UGGCUCUUUUAAGUAuUUGAAUA.................................................... len:23 al:1
....................UGGCUCUUUUAAGUAGUUGAAUAA................................................... len:24 al:4
....................UGGCUCUUUUAAGUgGUUGAAUAA................................................... len:24 al:1
....................UGGCUCUUUUAAGUAGUUGAAc..................................................... len:22 al:4
....................UGGCUCUUUUAAGUAGUcGAAU..................................................... len:22 al:1
....................UGGCUCUUUUAAGUAGUUGAAUu.................................................... len:23 al:3
.....................GGCUCUUUUAAGUAGUUGAAU..................................................... len:21 al:1
.......................CUCUUUUAAGUAGUUGgAUAA................................................... len:21 al:2
........................UCUUUUAAGUAGUUGgAUAA................................................... len:20 al:3
..........................UUUUAAGUAGUUGgAUAA................................................... len:18 al:1
.................................................UUUACUCACUaCUUAAAAGAGU........................ len:22 al:2
..................................................UUACUCACUGCUUAAAAGA.......................... len:19 al:2
..................................................UUACUCACUaCUUAAAAGA.......................... len:19 al:1
...................................................UACUCACUaCUUAAAAGA.......................... len:18 al:79
...................................................UACUCACUaCUUAAAAGAGU........................ len:20 al:1
....................................................ACUCACUGCUUAAAAGAuUCACU.................... len:23 al:3
....................................................ACUCACUGCUUAAAAGgGUCACU.................... len:23 al:1
....................................................ACcCACUGCUUAAAAGAGUCACU.................... len:23 al:1
....................................................ACaCACUGCUUAAAAGAGUCAC..................... len:22 al:2
....................................................ACUCACUGCUUAgAAGAGUCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAgGAGUCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGAGUCAu..................... len:22 al:1
....................................................ACUCACUGCUUAAAAGAGcCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGAGUCACUc................... len:24 al:5
....................................................ACUCACcGCUUAAAAGAGUCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGgG......................... len:18 al:1
....................................................ACUCACUGCUUAAAAGAGUCAC..................... len:22 al:3
....................................................ACUCACUGCUUAAAAGAGUCACc.................... len:23 al:44
....................................................ACUCACUGCUUAAAAGAa......................... len:18 al:1
....................................................ACUCACUGCUUAAAAGAGUCACU.................... len:23 al:192
....................................................ACUCACUGCUUAAAAGAGUCACUA................... len:24 al:1
....................................................ACUCACUGCUUAAAAGAGUCACUu................... len:24 al:13
....................................................ACUCACUGCUUAAAAGAGUCuCU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGAGUCACUuC.................. len:25 al:2
....................................................ACUCACUGCUUAAAAGAGUCACa.................... len:23 al:23
....................................................ACUCACUGCUUAAAuGAGUCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGgGU........................ len:19 al:1
....................................................gCUCACUGCUUAAAAGAGUCACU.................... len:23 al:10
....................................................ACUCACUGCUUAAAAGAGUCcCU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGAGUCAg..................... len:22 al:1
....................................................ACUCACUGCUUAAAAGAcUCACU.................... len:23 al:2
....................................................ACUCACUGCUUAAAAGAaU........................ len:19 al:1
....................................................ACUCACUGCUUAAAAGAGUCA...................... len:21 al:1
....................................................ACUCACUGCUUAAAAGAGUCACg.................... len:23 al:10
.....................................................CUCACUGCUUAAAAGAGUCA...................... len:20 al:1
.....................................................CUCACUGCUUAAAAGAGUCACUc................... len:23 al:3
.....................................................CUCACUGCUUgAAAGAGUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAgGAGUCACU.................... len:22 al:7
.....................................................CUCACUGCUUAAAAGAGUCACU.................... len:22 al:502
.....................................................CUCACUGCUUAAAAGAcUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUCAC..................... len:21 al:20
.....................................................CUCACUGCUUAAAAGAGUCAa..................... len:21 al:1
.....................................................CcCACUGCUUAAAAGAGUCAC..................... len:21 al:1
.....................................................CUCgCUGCUUAAAAGAGUCACU.................... len:22 al:3
.....................................................CUCACcGCUUAAAAGAGUCACU.................... len:22 al:2
.....................................................CUCACUGCUUAAAAGAGUCgCU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGU........................ len:18 al:1
.....................................................CUCACUGCUUAAAAGAGUCAuU.................... len:22 al:2
.....................................................CUCACUGCUUAAAuGAGUCACU.................... len:22 al:2
.....................................................CUCACUGCUUAAAAGAGUCAu..................... len:21 al:3
.....................................................CUCACUGCUUAAAAGAuUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUCACUu................... len:23 al:10
.....................................................CUCACUGCUUAgAAGAGUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUCcCU.................... len:22 al:6
.....................................................CUCACUGCUUAAAAGAGUCACa.................... len:22 al:58
.....................................................CUCACUGCUUAAAAGgGUCACU.................... len:22 al:1
.....................................................CUCAuUGCUUAAAAGAGUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUC....................... len:19 al:4
.....................................................CUCACUGCUUAAAAGgGUCAC..................... len:21 al:1
.....................................................CUCACUGCUUAAAAGgGU........................ len:18 al:2
.....................................................CUCACUGCUUAAAAGAGUCACcA................... len:23 al:1
.....................................................CUCACUGCUUAAAAGAGUCu...................... len:20 al:3
.....................................................CUCACUGCUUAAAAGAGUCACUuC.................. len:24 al:4
.....................................................CUCACUGCUUAAAAGAGUCACg.................... len:22 al:13
.....................................................CUCACUGCUUAAAAGAGaCACU.................... len:22 al:1
.....................................................CaCACUGCUUAAAAGAGUCAC..................... len:21 al:1
.....................................................CUCACUGCUUAAAAGAGUu....................... len:19 al:1
.....................................................CUCACUGCUUAAAAGAGUa....................... len:19 al:1
.....................................................CUCACUGCUUAAAAGAGUCACc.................... len:22 al:107
.....................................................CUCACUGCUUAAAAGAGcCACU.................... len:22 al:6
......................................................cCACUGCUUAAAAGAGUCACU.................... len:21 al:1
......................................................UCACUGCUUAAAAGAGUCgCU.................... len:21 al:1
......................................................UCACUGCUUAAAAGAGUCACa.................... len:21 al:2
......................................................UCACUGCUUAAAAGAGUCACU.................... len:21 al:10
.......................................................CACUGCUUAAAAGAGUCACg.................... len:20 al:1
.......................................................CgCUGCUUAAAAGAGUCACU.................... len:20 al:1