Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.2.1-Apul-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: NC_058068.1:598123-598215 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.2.1-Apul-sRNAseq-ShortStack-31bp-fastp-merged-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_2522.ps
Locus Name: Cluster_2522
UGAAAACUGACAAUAGUUACAUUUCACUAGAUGAGCGCUAACUGUUAUUGUUCUGCGUUAUCGGUGAAAUUGUAACUGUUGUCUCCUGUUGUU
........((((((((((((((((((((.(((((.(((.(((.......)))..))))))))))))))).))))))))))))).......... (-34.50)
....................uUUUCACUAGAUGAGCGCUAAC................................................... len:22 al:7
....................AUUUCACUAGAUGAGgGCU...................................................... len:19 al:1
....................AUUUCACUAGAUGAGCGCcA..................................................... len:20 al:9
....................AUUUCACUAGAUGAGCGCgA..................................................... len:20 al:2
....................AUUUCAuUAGAUGAGCGCUAAC................................................... len:22 al:1
....................AUUUuACUAGAUGAGCGCUAAC................................................... len:22 al:4
....................AUUUCACUAGAUGAGCGCUu..................................................... len:20 al:1
....................AUUUCACUAGAUGAGCGCgAAC................................................... len:22 al:1
....................AUUUCACUAGAUGAGCGCUA..................................................... len:20 al:85
....................AUUUCAgUAGAUGAGCGCUAACU.................................................. len:23 al:1
....................AUUUCACUAGAUGAGCGCUAA.................................................... len:21 al:20
....................AUUUCACUAGAUGgGCGCUAAC................................................... len:22 al:3
....................AUUUCACUAGAUGAGCGCUAAa................................................... len:22 al:10
....................AUUUCACUAGAUGAGCGCUAAu................................................... len:22 al:97
....................AUcUCACUAGAUGAGCGCUAAC................................................... len:22 al:3
....................AUUUCACUAGAUGAGCGCUAACUuU................................................ len:25 al:2
....................AUUcCACUAGAUGAGCGCUAACU.................................................. len:23 al:2
....................AUUUCACUAGAUGAGCGCUAACUG................................................. len:24 al:1
....................AUUUCgCUAGAUGAGCGCUA..................................................... len:20 al:1
....................AUUUCACUAGAUGgGCGCUAA.................................................... len:21 al:2
....................AUUUCACUAGAUGAaCGCUAAC................................................... len:22 al:2
....................AUUUCACUAGAUGAGCGCUAcC................................................... len:22 al:2
....................AUUUCACUAGAcGAGCGCUA..................................................... len:20 al:1
....................AUUUCACcAGAUGAGCGCUAAC................................................... len:22 al:5
....................AUUUCACUAGAUGAGCGCc...................................................... len:19 al:13
....................AUUUCACUAGAUGAGCGCUAACU.................................................. len:23 al:176
....................gUUUCACUAGAUGAGCGCUAAC................................................... len:22 al:18
....................AUUcCACUAGAUGAGCGCU...................................................... len:19 al:2
....................AUUUCcCUAGAUGAGCGCUA..................................................... len:20 al:1
....................AUUUCACUAGAUGAGCGCUg..................................................... len:20 al:2
....................AUUUCACUAGAUGAGCGCUAACc.................................................. len:23 al:31
....................AUUUCACUAGAUGAGCGCcAACU.................................................. len:23 al:1
....................AUUUCACUAGAUGAGCGCUAAuU.................................................. len:23 al:1
....................AUUUCACUAGAcGAGCGCUAAC................................................... len:22 al:4
....................AUUUCACUAGAUGAGCGCUAu.................................................... len:21 al:1
....................AUUUCACUAGAUcAGCGCUAAC................................................... len:22 al:1
....................gUUUCACUAGAUGAGCGCU...................................................... len:19 al:2
....................AUUUCACUAGAUGAGCGCUAAC................................................... len:22 al:1178
....................AUUUCACUAGAUGcGCGCUAAC................................................... len:22 al:1
....................AUUcCACUAGAUGAGCGCUAAC................................................... len:22 al:8
....................AcUUCACUAGAUGAGCGCUAAC................................................... len:22 al:6
....................AUUUCACUAGAUGAGCGCUAACg.................................................. len:23 al:7
....................AUUUCACUAGAUGAGCaCU...................................................... len:19 al:2
....................AUUUCACUAGAUGAGCGCa...................................................... len:19 al:4
....................AUUUCACUAGAUGAGCGCUAgCU.................................................. len:23 al:2
....................AUUUCACUAGAUGAGCGuUAAC................................................... len:22 al:2
....................AUUUCACUAGAUGAGCGCUAgC................................................... len:22 al:10
....................AUUUCACUAGAUGAGCGCUgAC................................................... len:22 al:5
....................AUUUuACUAGAUGAGCGCUAACU.................................................. len:23 al:1
....................uUUUCACUAGAUGAGCGCUA..................................................... len:20 al:1
....................AUUUCACUAGAUGAGCGCUAc.................................................... len:21 al:1
....................AUUUCACUAGAUGAGCGCUcAC................................................... len:22 al:1
....................AUUUCACUAGAUGAGCGCg...................................................... len:19 al:1
....................AUUUCACUAGAUGAGuGCUAAC................................................... len:22 al:1
....................AUUUCACUAGAUGAGCGCUAACUu................................................. len:24 al:1
....................uUUUCACUAGAUGAGCGCUAACU.................................................. len:23 al:2
....................AUUUCACUAGAUGgGCGCUAACU.................................................. len:23 al:1
....................AUUUCACUAGgUGAGCGCUAAC................................................... len:22 al:4
....................cUUUCACUAGAUGAGCGCUAACU.................................................. len:23 al:1
....................gUUUCACUAGAUGAGCGCUAACU.................................................. len:23 al:2
....................AUUUCACaAGAUGAGCGCUAAC................................................... len:22 al:1
....................AUUUCACUuGAUGAGCGCUAAC................................................... len:22 al:1
....................AUUUCACUAGAUGAGCGCUAACa.................................................. len:23 al:148
....................AUUUCACUgGAUGAGCGCUAAC................................................... len:22 al:7
....................AUUUCACUAGAUGAGCGCUgA.................................................... len:21 al:2
....................AUUUCACUAGAUGAGCGCU...................................................... len:19 al:51
....................AUaUCACUAGAUGAGCGCUA..................................................... len:20 al:1
.....................UUUCACUAGAUGAGCGCU...................................................... len:18 al:2
.....................UUUCACUAGAUGAGCGCUAAC................................................... len:21 al:4
.....................UUUCACUAGAUGAGCGCUAACU.................................................. len:22 al:1
.....................UUUCACUAGAUGAGCGCUAACa.................................................. len:22 al:3
......................UUCACUAGAUGAGCGCUAACU.................................................. len:21 al:1
......................UUCACUAGAUGAGCGCUAACa.................................................. len:21 al:1
......................UUCACUAGAUGAGCGCUAACUGUUAUUGUU......................................... len:30 al:1
......................UUCACUAGAUGAGCGCUAAu................................................... len:20 al:1
......................UUCACUAGAUGAGCGCUA..................................................... len:18 al:1
......................UUCACUAGAUGAGCGCUAACUGUUAUUGUUa........................................ len:31 al:1
.......................UCACUAGAUGAGCGCUAAC................................................... len:19 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAuAUUG..................... len:30 al:1
..........................................UGUUAUcGUUCUGCGUUAUCGGUGAAAUUGU.................... len:31 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGaUGAAAUUGU.................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUGU.................... len:31 al:289
..........................................UGUUAUUGUUCUGCGUUgUCGGUGAAAUUGU.................... len:31 al:1
..........................................cGUUAUUGUUCUGCGUUAUCGGUGAAAUUGU.................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUU...................... len:29 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGGUGgAAUUGU.................... len:31 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUGg.................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUcG..................... len:30 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUGc.................... len:31 al:49
..........................................UGUUAUUGUUCUGCGUUAUCGGUGgAAUUG..................... len:30 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUG........................... len:24 al:3
..........................................UGUUAUUGUUCUGuGUUAUCGGUGAAAUUGU.................... len:31 al:1
..........................................UGUUgUUGUUCUGCGUUAUCGGUGAAAUUGU.................... len:31 al:3
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUGa.................... len:31 al:5
..........................................UuUUAUUGUUCUGCGUUAUCGGUGAAAUUGU.................... len:31 al:1
..........................................UGcUAUUGUUCUGCGUUAUCGGUGAAAUUGU.................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGcGAAAUUGU.................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUC............................... len:20 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAgUUGU.................... len:31 al:2
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAgAUUGU.................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUG..................... len:30 al:14
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUUa..................... len:30 al:2
..........................................UGUcAUUGUUCUGCGUUAUCGGUGAAAUUGU.................... len:31 al:1
..........................................aGUUAUUGUUCUGCGUUAUCGGUGAAAUUGU.................... len:31 al:1
..........................................UGUUAUUGUUCUGCGUUAUCGGUGAAAUaGU.................... len:31 al:1
...........................................GUUAUUGUUCUGCGUUAUCGGUGAAAUUGc.................... len:30 al:1
...........................................GUUAUUGUUCUGCGUUAUCGGUGAAAUUGU.................... len:30 al:1
.............................................aAUUGUUCUGCGUUAUCGGUGAAAUUGU.................... len:28 al:1
..................................................cUCUGCGUUAUCGGUGAAAUU...................... len:21 al:1
..................................................UUCUGCGUUAUCGGUGAAAUUG..................... len:22 al:1
..................................................cUCUGCGUUAUCGGUGAAAUUGU.................... len:23 al:2
..................................................UUCUGCGUUAUCGGUGAAAUUGU.................... len:23 al:4
...................................................UCUGCGUUAUCGGUGAAAUcGU.................... len:22 al:30
...................................................UCUGCGUUAUCGGUGAAAcUG..................... len:21 al:3
...................................................cCUGCGUUAUCGGUGAAAUUGUA................... len:23 al:1
...................................................UCUGCGUUAUCGGUGAAAUa...................... len:20 al:1
...................................................UCUGCGUUAUCGGUGAAAa....................... len:19 al:6
...................................................UCUGCGUUAUCGaUGAAAUUGUA................... len:23 al:2
...................................................UaUGCGUUAUCGGUGAAAUU...................... len:20 al:1
...................................................UCUGCGUUAUCGGcGAAAUUGU.................... len:22 al:52
...................................................UCUGCGUUAUCGGUGAAAUgGU.................... len:22 al:16
...................................................UCUGCGUUgUCGGUGAAAUUG..................... len:21 al:5
...................................................UaUGCGUUAUCGGUGAAAUUGU.................... len:22 al:4
...................................................UgUGCGUUAUCGGUGAAAUUGU.................... len:22 al:2
...................................................UCUGCGUUAUCGGUGAAAUUGUg................... len:23 al:8
...................................................UCUGCGUUAUCGGUGAAAUUGg.................... len:22 al:217
...................................................UCUGCGUUAUCGGUGAAAUUc..................... len:21 al:8
...................................................UCUGCGUUAUCGGUGAAAUUGUuA.................. len:24 al:7
...................................................UCUGCGUUAUCGGUGcAAUU...................... len:20 al:1
...................................................UCUGCGUUAUCGGUGAAAaUGU.................... len:22 al:4
...................................................UCUGCGUUAUCGGUGAAAUUGUAAu................. len:25 al:2
...................................................UCUGCGUUAUCGGUGAAAg....................... len:19 al:12
...................................................UCUGCGUUAUgGGUGAAAUUGU.................... len:22 al:1
...................................................UCcGCGUUAUCGGUGAAAUUGU.................... len:22 al:65
...................................................UCUGCGUUAUCGGUaAAAUUG..................... len:21 al:1
...................................................UCUGCGUUAUaGGUGAAAUUGU.................... len:22 al:2
...................................................UCUGuGUUAUCGGUGAAAUUGU.................... len:22 al:18
...................................................UCUGCGUUgUCGGUGAAAUUGU.................... len:22 al:28
...................................................UCUGCGUUAgCGGUGAAAUUGU.................... len:22 al:1
...................................................UCUGCGUUAUuGGUGAAAUUGU.................... len:22 al:14
...................................................UCUGaGUUAUCGGUGAAAUUGU.................... len:22 al:3
...................................................UCUGCGcUAUCGGUGAAAUUGU.................... len:22 al:40
...................................................UCUGCGUUAUCGGUGAuAUU...................... len:20 al:1
...................................................UCUGCGUUAUCGGUGAAgUUGUA................... len:23 al:2
...................................................UCUGCGUUAUCGaUGAAAUUGU.................... len:22 al:10
...................................................UCUGCGUUAUaGGUGAAAUUG..................... len:21 al:1
...................................................UCUGCGUUAUCGGUGAcAUUGU.................... len:22 al:1
...................................................UCUGCGUUAUCGGUGAAuUUGU.................... len:22 al:8
...................................................UCcGCGUUAUCGGUGAAAUUG..................... len:21 al:2
...................................................UCUGCGUUAUCGGUGAAAUUGUA................... len:23 al:192
...................................................UCUGCGUUAUCaGUGAAAUU...................... len:20 al:1
...................................................UCUGCGUUAUCGGUGAAAUUGUu................... len:23 al:233
...................................................UCUGuGUUAUCGGUGAAAUU...................... len:20 al:1
...................................................UCUGCGUUAUCGGUGAAAUUG..................... len:21 al:525
...................................................UCUGCGUUAUCGGUGAAAUUu..................... len:21 al:7
...................................................UCUGCGUUAUCGGcGAAAUU...................... len:20 al:2
...................................................UCUGCGUUcUCGGUGAAAUUGU.................... len:22 al:1
...................................................UCUGCGUcAUCGGUGAAAUUGU.................... len:22 al:18
...................................................UuUGCGUUAUCGGUGAAAU....................... len:19 al:1
...................................................UCUGCGUUAUCGGUGAAAUUGUAu.................. len:24 al:15
...................................................UCUGCGUUAUCGGUGAAAcU...................... len:20 al:2
...................................................UCUGCGUUAUCGaUGAAAUUG..................... len:21 al:1
...................................................UCUGCGUUAUCcGUGAAAUUGU.................... len:22 al:1
...................................................gCUGCGUUAUCGGUGAAAUUGU.................... len:22 al:7
...................................................UCUGCGUUAUCGGUGAAAUUGa.................... len:22 al:324
...................................................UCUGCGaUAUCGGUGAAAUUGU.................... len:22 al:8
...................................................UCUaCGUUAUCGGUGAAAUUGUA................... len:23 al:1
...................................................UCUGCGUUAUCGGUGAAcUUGU.................... len:22 al:3
...................................................aCUGCGUUAUCGGUGAAAUU...................... len:20 al:1
...................................................cCUGCGUUAUCGGUGAAAUUGU.................... len:22 al:83
...................................................UCUGCGUUAUCGGUGAAAUUGUc................... len:23 al:43
...................................................cCUGCGUUAUCGGUGAAAU....................... len:19 al:1
...................................................UCUGCGUUAUCGGgGAAAUU...................... len:20 al:1
...................................................UCUGCGUUAUCGGUGgAAUUGUA................... len:23 al:2
...................................................UCUGCGUUAUCGGUGgAAUUGU.................... len:22 al:66
...................................................UCUGCGUUAUCGGUGAuAUUGU.................... len:22 al:4
...................................................UCUGCGUcAUCGGUGAAAU....................... len:19 al:1
...................................................UCUGCGUUAUCGGUGAAAU....................... len:19 al:162
...................................................UCUGCGUUAUCGGUGAAgUU...................... len:20 al:1
...................................................UCUGCGUUAcCGGUGAAAUUGU.................... len:22 al:11
...................................................UCUGCGUUAUCGGUGgAAUUG..................... len:21 al:2
...................................................UuUGCGUUAUCGGUGAAAUUG..................... len:21 al:1
...................................................UCUGCGUUAUCGGUGAAAUUGc.................... len:22 al:2890
...................................................UCUGCGUUAUaGGUGAAAU....................... len:19 al:1
...................................................UCUGCGgUAUCGGUGAAAUUGU.................... len:22 al:3
...................................................cCUGCGUUAUCGGUGAAAUUG..................... len:21 al:3
...................................................UCUGCGUUAUCGGUGAAAUUGcA................... len:23 al:15
...................................................UCUGCGUUAUCGGUGAAAUU...................... len:20 al:256
...................................................UCUGCGUUAUCGGUGAAu........................ len:18 al:4
...................................................UCUGCGUUAUCGGcGAAAU....................... len:19 al:2
...................................................UCgGCGUUAUCGGUGAAAUUG..................... len:21 al:1
...................................................UCaGCGUUAUCGGUGAAAUU...................... len:20 al:1
...................................................UCUGCGUUAUCGGUGAAAUUaU.................... len:22 al:18
...................................................UCUGCGUUAUCGGgGAAAUUGU.................... len:22 al:2
...................................................UCUGCGUUAUCGGUa........................... len:15 al:1
...................................................UCUGCGUUAUCGGUGAAAUUGU.................... len:22 al:14873
...................................................UCUGCGUUAUCGGUGAAAUUGUAc.................. len:24 al:4
...................................................UCUGCGUUAUCGGUGAAAUcG..................... len:21 al:4
...................................................UCUGCGUaAUCGGUGAAAUUGUAA.................. len:24 al:1
...................................................UCUGCaUUAUCGGUGAAAUUGU.................... len:22 al:22
...................................................UCUGCGUUAUCGGUGAAAUUuU.................... len:22 al:9
...................................................UCUaCGUUAUCGGUGAAAUUGU.................... len:22 al:8
...................................................UCUGCGUUAUCGGUGuAAUUGU.................... len:22 al:12
...................................................UCUGCGUUAUCGGUuAAAUUGU.................... len:22 al:3
...................................................UCUGCGUUAUCaGUGAAAUUGU.................... len:22 al:32
...................................................UCUGCGUUAUCGGUGAAgUUG..................... len:21 al:2
...................................................UCUGCGUUAUCGGUGAgAUUGU.................... len:22 al:62
...................................................UCUGCGUUAaCGGUGAAAUUGU.................... len:22 al:3
...................................................UCUGCGUUAUCGGUGAAA........................ len:18 al:17
...................................................UCUGCGUUuUCGGUGAAAUUGU.................... len:22 al:1
...................................................UCUGCGUUAUCGGUGgAAU....................... len:19 al:1
...................................................UCUGuGUUAUCGGUGAAAUUG..................... len:21 al:1
...................................................UCUGCGUUAUCGGUGAAAUaGU.................... len:22 al:3
...................................................UCUuCGUUAUCGGUGAAAUUGU.................... len:22 al:3
...................................................UCUGCGUUAUCGGUaAAAUUGU.................... len:22 al:6
...................................................UCUGCGUUAUCGGUGAAAgUGU.................... len:22 al:5
...................................................UCUGCGcUAUCGGUGAAAU....................... len:19 al:1
...................................................UCUGCGcUAUCGGUGAAAUU...................... len:20 al:2
...................................................UuUGCGUUAUCGGUGAAAUU...................... len:20 al:4
...................................................UCUGuGUUAUCGGUGAAAUUGUA................... len:23 al:1
...................................................UCUGCGUUAUCGGUG........................... len:15 al:5
...................................................UCUGCGUUAUCGGUGAAAcUGU.................... len:22 al:38
...................................................UCUGCGUUAUCuGUGAAAUUGU.................... len:22 al:4
...................................................UCUGCGUUAUCGGUGAAAUc...................... len:20 al:37
...................................................aCUGCGUUAUCGGUGAAAUUGU.................... len:22 al:26
...................................................aCUGCGUUAUCGGUGAAAU....................... len:19 al:2
...................................................UCUGCGUUAUCGaUGAAAUU...................... len:20 al:2
...................................................UCUGCGUUAUCGGUGAAgU....................... len:19 al:5
...................................................UCUGCGUUAUCGGUGcAAUUGU.................... len:22 al:2
...................................................UCUGCGUUAUCGGUGAAAUgG..................... len:21 al:1
...................................................UCUGCGUUAUCGGUGAAgUUGU.................... len:22 al:53
...................................................UCUGCGUUAUCGGUGAAAUUa..................... len:21 al:59
...................................................UCcGCGUUAUCGGUGAAAUU...................... len:20 al:3
...................................................UCUGCGUUAUCGGUGAAAc....................... len:19 al:19
...................................................UuUGCGUUAUCGGUGAAAUUGU.................... len:22 al:43
...................................................UCUGCGUUAUCGGUGAgAUUG..................... len:21 al:3
...................................................UCgGCGUUAUCGGUGAAAUUGU.................... len:22 al:2
...................................................UCUGCGUUAUCGGUGAAAUUcU.................... len:22 al:15
...................................................UCaGCGUUAUCGGUGAAAUUGU.................... len:22 al:11
....................................................CUGCGUUAUCGGUGAAAUUGc.................... len:21 al:2
....................................................CUGCGUUAUCGGUGAAAU....................... len:18 al:1
....................................................CUGCGUUAUCGGUGAAAUUG..................... len:20 al:2
....................................................CUGCGUUAUCGGUGAAAUUGU.................... len:21 al:20
.....................................................UGCGUUAUCGGUGAAAUUGc.................... len:20 al:3
.....................................................UGCGUUAUCGGUGAAAUU...................... len:18 al:1
.....................................................UGCGUUAUCGGUGAAAUUGU.................... len:20 al:21
.....................................................UGCGUUAUCGGUGAAAUc...................... len:18 al:1
......................................................GCGUUAUCGGUGAAAUUGU.................... len:19 al:3