Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.2-Apul-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/merged_alignments.bam
Location: NC_058075.1:15908471-15908564 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.2-Apul-sRNAseq-ShortStack-31bp-fastp-merged/ShortStack_out/strucVis/Cluster_8478.ps
Locus Name: Cluster_8478
UACAGCAAGGGUUGGAGGUUACCAGACCCCUGCAAUCAAAGAGCUUUUUGUCUUUGAUUGCUGUGAUCUGGUUAUCUCGACUUCUUAACAACGA
......(((((.(.(((((.((((((.(.(.(((((((((((........))))))))))).).).)))))).))))).).)))))........ (-34.30)
....................ACCAGACCCCUGCAAUCAAAGA.................................................... len:22 al:1
....................ACCgGACCCCUGCAAUCAA....................................................... len:19 al:2
....................ACCAGACCCCUGCAAUCAA....................................................... len:19 al:2
....................ACCAGACCCCUGCAAUCAAgGA.................................................... len:22 al:1
....................ACCgGACCCCUGCAAUCAAAGA.................................................... len:22 al:7
......................CgGACCCCUGCAAUCAAAGA.................................................... len:20 al:2
....................................................UUUGAUUGCUGUGAUCcGG....................... len:19 al:1
....................................................cUUGAUUGCUGUGAUCUGGUU..................... len:21 al:1
....................................................UUUGAUUGCcGUGAUCUGGUUA.................... len:22 al:2
....................................................UUUGAUUGCUGUGAUCUGGUUgU................... len:23 al:3
....................................................UUUGAUUGCUGUGgUCUGGU...................... len:20 al:1
....................................................UUUGAUUGCUGUGAUCUGGUUAUa.................. len:24 al:2
....................................................UUUGAUUGCUGUGgUCUGGUUA.................... len:22 al:1
....................................................UUUGAUUGCUGUGAUCUGGUUu.................... len:22 al:6
....................................................UUUGAUUGCUGUGAUCUGGUUAc................... len:23 al:7
....................................................UUUGAUUGCUGUGAUCUGaUU..................... len:21 al:2
....................................................UUUGAUUGCUGUGAUCUGGUUAU................... len:23 al:43
....................................................cUUGAUUGCUGUGAUCUGGUUA.................... len:22 al:1
....................................................UUUGAUUGCUGUGAUCUGGUUAa................... len:23 al:3
....................................................UUUGAUUGCUGUGAUCUGGUUAg................... len:23 al:1
....................................................UUUGAUUGCUGUGAUCUa........................ len:18 al:1
....................................................UUUGAUUGCUGUGAUCUGGUgA.................... len:22 al:2
....................................................UUUGAUUGCUGUGAUCUGGUU..................... len:21 al:68
....................................................UUUGAUUGCUGUGAUCUGGUUg.................... len:22 al:1
....................................................UUUGAUUGCUGUGAUCUGGUUuU................... len:23 al:2
....................................................UUUGAUUGCUGUGAUCUGGUUA.................... len:22 al:143
....................................................UUUGAcUGCUGUGAUCUGGUUA.................... len:22 al:1
....................................................UUUGAUUGCUGUGAUCUGGUc..................... len:21 al:4
....................................................UUUGAUUGCUGUGAUCUGGcU..................... len:21 al:2
....................................................UUUGAUUGCUGUGAUCUGGc...................... len:20 al:1
....................................................UUUGAUUGCUGUGAUCUGGUcA.................... len:22 al:1
....................................................UUUGAUUGCUGUGAUCUGGUUAUu.................. len:24 al:2
....................................................UUUGAUUGCUGUGAUCUGGUa..................... len:21 al:2
....................................................UUUGAUUGCUGUGAUCUGGU...................... len:20 al:10
.....................................................UUGAUUGCUGUGAUCUGGUUA.................... len:21 al:1
.......................................................GAUUGCUGUGAUCUGGUUAU................... len:20 al:1
........................................................AUUGCUGUGAUCUGGUUAc................... len:19 al:1