Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: NC_058073.1:15996857-15996952 minus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_7250.ps
Locus Name: Cluster_7250
AGGAAAUUUUGUCUCAAAGGCGGUGAAAGUCGCUUCAAUACACAUUUGAUGUAUAUUGUACGACUCUCAUCGUGUUUCAGACAAUUACUUGAACCA
........((((((.(((.(((((((.(((((...(((((.((((...)))).)))))..))))).))))))).))).))))))............ (-30.80)
....................CGGUGAAAGUCGCUUCAAUACAu..................................................... len:23 al:1
....................CGGUGAAAGUCGCUUCAAUgCACA.................................................... len:24 al:1
....................CGGUGAAAGUCGCUUCAAUACAC..................................................... len:23 al:4
....................CGGUGAAAGUCGCUUCAAUACACA.................................................... len:24 al:24
....................CaGUGAAAGUCGCUUCAAUACACA.................................................... len:24 al:1
....................CGGUGAAAGUCGCUUCAAUACA...................................................... len:22 al:1
.......................UGAAAGUCGCUUCAAUACACAUUUGA............................................... len:26 al:1
..........................................CAUUUGAUGUAUAUUGUACGACUCUCAUu......................... len:29 al:1
...........................................AUUUGAUGUAUAUUGUACGACUCUCAUCGUa...................... len:31 al:1
............................................UUUGAUGUAUAUUGUACGACUCUCAUCGa....................... len:29 al:2
............................................UUUGAUGUAUAUUGUACGACUCUCAUCGUGU..................... len:31 al:1
............................................UUUGAUGUAUAUUGUACGACUCUCAUCGUa...................... len:30 al:1
............................................UUUGAUGUAUAUUGUACGACUCUCAUCGUG...................... len:30 al:5
...................................................UAUAcUGUACGACUCUCAUCGUGU..................... len:24 al:2
...................................................UAUAUUGUACGACUCUCAUCa........................ len:21 al:6
...................................................UAUAUUGUACGACUCUCAUuGU....................... len:22 al:1
...................................................UAUAUUGUgCGACUCUCAUC......................... len:20 al:2
...................................................UAUAUUGUACGACUCUCAUCaUGU..................... len:24 al:1
...................................................UAUAUUGUACGACUCUCAUgGUGU..................... len:24 al:1
...................................................UAUAUUGUACGACUaU............................. len:16 al:1
...................................................UAUAUUGUACGACUCUCAUCGaGU..................... len:24 al:2
...................................................UAUAUUGUACGACUCUCAUC......................... len:20 al:124
...................................................UAUAUcGUACGACUCUCAUCGUG...................... len:23 al:2
...................................................UuUAUUGUACGACUCUCAUCGUG...................... len:23 al:2
...................................................UAUAUUGUACGACcCUCAUCGU....................... len:22 al:1
...................................................UAUAUUGUACGgCUCUCAUCGUGU..................... len:24 al:3
...................................................UAUAUUGUACGACUCUCgUCGUGU..................... len:24 al:2
...................................................UAUAUUGUACGACUCUCAUCGc....................... len:22 al:22
...................................................UAUAUUGUACGACUCUCAUCGU....................... len:22 al:100
...................................................UAUAUUGUACGACUCUCAUu......................... len:20 al:15
...................................................UAaAUUGUACGACUCUCAUCGUG...................... len:23 al:1
...................................................UAUAUUGUACGgCUCUCAUCGUG...................... len:23 al:1
...................................................UAUAUUGUACGACUCUCgUCGUG...................... len:23 al:1
...................................................UAUAUUGUACGACUCUCAUCGUaU..................... len:24 al:3
...................................................UAUAUUGUACGACUCUCAUa......................... len:20 al:9
...................................................UAUAUUGUgCGACUCUCAUCGUGU..................... len:24 al:13
...................................................UAUAUUGUACGACUCUCAUCGUa...................... len:23 al:111
...................................................UAUAUUGUAuGACUCUCAUCGUGU..................... len:24 al:2
...................................................UAUAUUGUACGACUCUCgU.......................... len:19 al:1
...................................................UAUAUUGUACGACUCUCAUCGcGU..................... len:24 al:3
...................................................UAUAUUGUACGACUCUCAUCGgG...................... len:23 al:2
...................................................UAUAUUGUACGACUCUCAUCc........................ len:21 al:1
...................................................UAUAUUGUACGACUCUCAUCG........................ len:21 al:10
...................................................UAUAUUGcACGACUCUCAUCGUGU..................... len:24 al:2
...................................................UAUAUUGUACGACUCc............................. len:16 al:1
...................................................UAUAUUGUACGACUCcCAUCGUGU..................... len:24 al:2
...................................................UAUAUUGUACGACUCUCAUCGUGa..................... len:24 al:34
...................................................UAUAUUGUACGACUCUCAUCcU....................... len:22 al:3
...................................................UAUAUUGUACGACUCUC............................ len:17 al:2
...................................................UAUAUcGUACGACUCUCAUCGUGU..................... len:24 al:4
...................................................UAUAUUGUACGACUCUCAUCGUGUc.................... len:25 al:9
...................................................UAUAUUGUACGAuUCUCAU.......................... len:19 al:1
...................................................UAUAUUGUACGACUCUCAUCGUGUaU................... len:26 al:1
...................................................UAUAUUGUACGACUCUCAU.......................... len:19 al:40
...................................................UAUAUUGUACGACUCUCAc.......................... len:19 al:2
...................................................UAUAUUGUgCGACUCUCAUCGUGUU.................... len:25 al:1
...................................................UAUAUUGUACGACUCUCAUCGUGUU.................... len:25 al:33
...................................................UAUAUUGUACGACUCU............................. len:16 al:3
...................................................UAUgUUGUACGACUCUCAUCGUGU..................... len:24 al:2
...................................................UAUAUUGUACGACUCUCAUCGUuUU.................... len:25 al:1
...................................................UAaAUUGUACGACUCUCAUCGUGU..................... len:24 al:1
...................................................UAUAUUGUACGACUCUCAcCGUG...................... len:23 al:1
...................................................UAUAUUcUACGACUCUCAUCGUG...................... len:23 al:1
...................................................cAUAUUGUACGACUCUCAUCGU....................... len:22 al:1
...................................................UAUAUUGUACGACUCcCAUC......................... len:20 al:3
...................................................UAUAUUGUACGACUCUCAUCGUGU..................... len:24 al:526
...................................................UAUAUUGUACGACUCaCAUCGUGU..................... len:24 al:1
...................................................UAUAUUGUACGACaCUCAUCGUGU..................... len:24 al:2
...................................................UAUAUUGUACGACUCUCAUCGUGg..................... len:24 al:11
...................................................UAUAUUGUACGACUCUCAUCGUGc..................... len:24 al:81
...................................................UAUAUUGUACGACUCUCA........................... len:18 al:1
...................................................UAUAUUGUACGACUCUCAcCGUGU..................... len:24 al:1
...................................................UcUAUUGUACGACUCUCAUCG........................ len:21 al:1
...................................................UAUAUUGUACGACUCUCAcCGU....................... len:22 al:1
...................................................UAUAUUGaACGACUCUCAUCGUGU..................... len:24 al:2
...................................................UAUAUUGaACGACUCUCAUCGUGUU.................... len:25 al:1
...................................................UAUAUUGUACGACUCUCAUCGg....................... len:22 al:6
...................................................UAUAUUGUACuACUCUCAUCGUG...................... len:23 al:1
...................................................UAUAUUGUACGACUCUCAUCGcG...................... len:23 al:2
...................................................UAUAUUGUACGACUCcCAUCGUGUU.................... len:25 al:2
...................................................cAUAUUGUACGACUCUCAUCGUGU..................... len:24 al:1
...................................................UAUAUUGUACGACUCa............................. len:16 al:1
...................................................UAUAUUGUACGACUCUCAUCGUGUg.................... len:25 al:1
...................................................UAUAUUGUgCGACUCUCAUCGUG...................... len:23 al:4
...................................................aAUAUUGUACGACUCUCAUCGUGU..................... len:24 al:1
...................................................UAUAUUGUACGACUCUCAUCGUuU..................... len:24 al:3
...................................................UAUAUUGUACuACUCUCAUCGUGU..................... len:24 al:1
...................................................UAUAUUGUACGACUCUCAUCu........................ len:21 al:3
...................................................UAUAUUGUACGACUCUCAUCaU....................... len:22 al:1
...................................................UAUAUUGUACGACUCUCAUCGUGaU.................... len:25 al:1
...................................................UAUAUUGUACGACUCUCAUCGa....................... len:22 al:11
...................................................UAUAUUGUgCGACUCUCAUCGU....................... len:22 al:2
...................................................UAUAUcGUACGACUCUCAUC......................... len:20 al:1
...................................................UAUAUUGUACGACUCUCAUCGUcU..................... len:24 al:4
...................................................UAUAUUGUACGACUCUCAUuGUG...................... len:23 al:1
...................................................UAUAUUGUACGACUCUCAcC......................... len:20 al:1
...................................................UcUAUUGUACGACUCUCAUCGUGU..................... len:24 al:1
...................................................UAUAUUGUACGACcCUCAUCGUGU..................... len:24 al:6
...................................................UAUAUUGUACGACUCUCAUCGaG...................... len:23 al:2
...................................................UAcAUUGUACGACUCUCAUCGUGU..................... len:24 al:1
...................................................gAUAUUGUACGACUCUCAUCGUGU..................... len:24 al:1
...................................................UAUAUUGUACGACgCUCAUC......................... len:20 al:1
...................................................UAgAUUGUACGACUCUCAUCGU....................... len:22 al:1
...................................................UAUAUUGUACGACUCUCAUCGUc...................... len:23 al:7
...................................................UAUAUUGUACGACcCUCAUC......................... len:20 al:1
...................................................UAUAUUGUACGACUCUCAUCGUu...................... len:23 al:22
...................................................UAUAUUGUACGACcCUCAUCGUG...................... len:23 al:4
...................................................UAUAUUGUACGACUCUCAUCGUGUa.................... len:25 al:42
...................................................UAUAUUGUACGACUCUCAUCGUG...................... len:23 al:360
....................................................AUAUUGUACGACUCUCAUCGaGU..................... len:23 al:1
....................................................AUAUUGUACGACUCUCAUCGaG...................... len:22 al:1
....................................................AgAUUGUACGACUCUCAUCGUG...................... len:22 al:1
....................................................AUAUUGUACGACUCUCAUCGUGa..................... len:23 al:1
....................................................AUAUUGUACGACUCUCAUCGUGc..................... len:23 al:2
....................................................AUAUUGUACGgCUCUCAUCGUGU..................... len:23 al:1
....................................................AUAUUGUACGACUCUCAUCGUG...................... len:22 al:4
....................................................AUAUUGUACGACUCUCAUCGUa...................... len:22 al:3
....................................................AUAUUGUACGACUCUCAUCGU....................... len:21 al:3
....................................................AUAUUGUACGACUCUCAcCGUGU..................... len:23 al:1
....................................................AUAUUGUACGACUCUCAUCGUGU..................... len:23 al:21
....................................................AUAUUGUACGACUCUCAUCGUGUU.................... len:24 al:1
....................................................AUAUUGUACGACUCUCAUC......................... len:19 al:3
.....................................................UAUUGUACGACUCUCAUC......................... len:18 al:1
.....................................................UAUUGUACGACUCUCAUCGUG...................... len:21 al:1
.....................................................UAUUGUACGACUCUCAUCGU....................... len:20 al:2
.....................................................UAUUGUACGACUCUCAUCGUGc..................... len:22 al:1
.....................................................UAUUGUACGACUCUCAUCGUGU..................... len:22 al:2
.....................................................UAUUGUACGACUCUCAUCGUGUU.................... len:23 al:1
.....................................................UAUUGUACGACUCUCAU.......................... len:17 al:1
.......................................................UUGUACGACUCUCAUCGU....................... len:18 al:1
.......................................................UUGUACGACUCUCAUC......................... len:16 al:1
.......................................................UUGUACGACUCUCAU.......................... len:15 al:1
.......................................................UUGUACGACUuUCAUCGU....................... len:18 al:1
.......................................................UUGUACGACUCUCAUa......................... len:16 al:1
.......................................................UUGUACGACcCUCAUCGU....................... len:18 al:1
........................................................UGUACGACUCUCAUCc........................ len:16 al:1