Genome: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/data/Amil/ncbi_dataset/data/GCF_013753865.1/GCF_013753865.1_Amil_v2.1_genomic.fa
Alignments: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/merged_alignments.bam
Location: NC_058073.1:11856121-11856215 plus
Post-script file name: /home/shared/8TB_HDD_01/sam/gitrepos/deep-dive/D-Apul/output/13.11-Apul-sRNAseq-ShortStack-R1-reads-cnidarian_miRBase/ShortStack_out/strucVis/Cluster_7179.ps
Locus Name: Cluster_7179
AGUUUUGAAUGAAAUUGUAUUGGCUCUUUUAAGUAGUUGAAUAAUUAAAUUUACUCACUGCUUAAAAGAGUCACUACAGCUUUGUCUUACUUACA
........(((((.(((((.(((((((((((((((((.((.(((......))).))))))))))))))))))).))))).))))).......... (-30.20)
.GUUUUGAAUGAAAUUGUAgU.......................................................................... len:20 al:8
.GUUUUGAAUGAAAUUGU............................................................................. len:17 al:2
..UUUUGAAUGAAAUUGUAgU.......................................................................... len:19 al:72
..UUUUGAAUGAAAUUGU............................................................................. len:16 al:17
...UUUGAAUGAAAUUGU............................................................................. len:15 al:3
...UUUGAAUGAAAUUGUAgU.......................................................................... len:18 al:11
.......AAUGAAAUUGUAgUGGCUCUUUUAAGUAGUU......................................................... len:31 al:1
..........GAAAUUGUAgUGGCUCUUUUAAGU............................................................. len:24 al:1
...........AAAUUGUAgUGGCUCUUUUAAGUAGUU......................................................... len:27 al:1
....................UGGCUCUUUUAAGUAGUUGAAc..................................................... len:22 al:4
....................UGGCUCUUUUAAGUAuUUGAAUA.................................................... len:23 al:1
....................UGGCUCUUUUAAGUAGUUGAAUAAa.................................................. len:25 al:1
....................UGGCUCUUUUAAGUAGUUGAAUc.................................................... len:23 al:1
....................UGGCUCUUUUAAGUAGUUGAAUA.................................................... len:23 al:9
....................UGGCUCUUUUAAGUgGUUGAAUAA................................................... len:24 al:1
....................UGGCUCUUUUAAGUAGUUGAAUAA................................................... len:24 al:4
....................UGGCUCUUUUAAGUAGUUGAAUu.................................................... len:23 al:3
....................UGGCUCUUUUAAGUAGUUGAAUAAUU................................................. len:26 al:2
....................UGGCUCUUUUAAGUAGUUGAAU..................................................... len:22 al:4
....................UGGCUCUUUUAAGUAGUcGAAU..................................................... len:22 al:1
....................UGGCUCUUUUAAGUA............................................................ len:15 al:1
.....................GGCUCUUUUAAGUAGUUGAAU..................................................... len:21 al:1
.......................CUCUUUUAAGUAGUUGgAUAA................................................... len:21 al:2
........................UCUUUUAAGUAGUUGgAUAA................................................... len:20 al:3
..........................UUUUAAGUAGUUGgAUAA................................................... len:18 al:1
.................................................UUUACUCACUaCUUAAAAGAGU........................ len:22 al:2
..................................................UUACUCACUGCUUAAAAGA.......................... len:19 al:2
..................................................UUACUCACUaCUUAAAAGA.......................... len:19 al:1
...................................................UACUCACUaCUUAAAAGAGU........................ len:20 al:1
...................................................UACUCACUaCUUAAAAG........................... len:17 al:12
...................................................UACUCACUaCUUAAAAGA.......................... len:18 al:79
...................................................UACUCACUaCUUAAA............................. len:15 al:8
....................................................ACUCgCUGCUUAAAAGA.......................... len:17 al:1
....................................................ACaCACUGCUUAAAAGAGUCAC..................... len:22 al:2
....................................................ACUCACUGCUUAAAAGAGUCAu..................... len:22 al:1
....................................................ACUCACUGCUUAAAAGAcUCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGAGUCA...................... len:21 al:1
....................................................ACUCACUGCUUAAAAGAGUCACg.................... len:23 al:10
....................................................ACUCACUGCUUAAAAGc.......................... len:17 al:1
....................................................ACUCACUGCUUAAAAGAGcCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGAGUCAg..................... len:22 al:1
....................................................ACUCACUGCUUAAAAGAaU........................ len:19 al:1
....................................................ACUCACUGCUUAAAAGAGUCACc.................... len:23 al:45
....................................................ACUCACUGCUUAAAAGAGUCcCU.................... len:23 al:1
....................................................ACUaACUGCUUAAAAGAGUCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGgGUCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAG........................... len:16 al:16
....................................................ACUCACUGCUUAAAAGAGUCACU.................... len:23 al:190
....................................................ACUCACUGCUUAAAuGAGUCACU.................... len:23 al:1
....................................................uCUCACUGCUUAAAAGA.......................... len:17 al:1
....................................................ACUCACUGCUUAAAAGAGUCuCU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGAa......................... len:18 al:1
....................................................ACUCACUGCUUAAAAa........................... len:16 al:1
....................................................ACUCACUGCUUAAAAGAGUCACUA................... len:24 al:1
....................................................ACUCACUGuUUAAAAG........................... len:16 al:1
....................................................ACUCACUGCUUAAAAGAuUCACU.................... len:23 al:3
....................................................ACUCACUGCUUAAAAGAGUCACUu................... len:24 al:13
....................................................gCUCACUGCUUAAAAGAGUCACU.................... len:23 al:10
....................................................ACUCACUGCUUAAAAGgG......................... len:18 al:3
....................................................ACUCACUGCUUAAAA............................ len:15 al:2
....................................................ACUCACUGCUUAAAAGA.......................... len:17 al:24
....................................................ACUCACcGCUUAAAAGAGUCACU.................... len:23 al:1
....................................................ACUCACUGCUUAgAAGAGUCACU.................... len:23 al:1
....................................................ACUuACUGCUUAAAAGA.......................... len:17 al:1
....................................................ACUCACUGCUUAAAAGAGUCACUc................... len:24 al:5
....................................................ACUCACUGCUUAAAAGg.......................... len:17 al:4
....................................................ACUCACUGCUUAAAgGAGUCACU.................... len:23 al:1
....................................................ACUCACUGCUUAAAAGAGUCACa.................... len:23 al:23
....................................................ACUCACUGCUUAAAAGAGUCACUuC.................. len:25 al:2
....................................................ACUCACUGCUUAAAAGAGUCAC..................... len:22 al:3
....................................................ACUCACUGCUUAAAAGgGU........................ len:19 al:2
....................................................ACcCACUGCUUAAAAGAGUCACU.................... len:23 al:1
.....................................................CUCACUGCUUAAAAGAGUCACUu................... len:23 al:10
.....................................................CUCACcGCUUAAAAGAGUCACU.................... len:22 al:2
.....................................................CUCACUGCUUAAAAGAGUC....................... len:19 al:2
.....................................................CUCACUGCUUAAAuGAGUCACU.................... len:22 al:2
.....................................................CUCACUGCUUAAAAGAGUCACU.................... len:22 al:497
.....................................................CUCACUGCUUAAAAGAcUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUu....................... len:19 al:1
.....................................................CUCACUGCUUAAAAGAGU........................ len:18 al:1
.....................................................CUCACUGCUUAAAAGAuUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGaCACU.................... len:22 al:1
.....................................................CUCAuUGCUUAAAAGAGUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUCACUc................... len:23 al:3
.....................................................aUCACUGCUUAAAAGAGUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUa....................... len:19 al:1
.....................................................CUCACUGCUUAAAAGAGcCACU.................... len:22 al:6
.....................................................CUCACUGCUUgAAAGAGUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUCAuU.................... len:22 al:2
.....................................................CUCACUGCUUAAAAGAGUCAu..................... len:21 al:3
.....................................................CUCACUGCUUAgAAGAGUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUCACg.................... len:22 al:13
.....................................................CUCACUGCUUAAAAGAGUCACUuC.................. len:24 al:4
.....................................................CaCACUGCUUAAAAGAGUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUCAC..................... len:21 al:22
.....................................................CUCACUGCUUAAAAGgGUCACU.................... len:22 al:1
.....................................................CUCACUGCUUAAAAGAGUCAa..................... len:21 al:1
.....................................................CcCACUGCUUAAAAGAGUCAC..................... len:21 al:1
.....................................................CUCACUGCUUAAAAGAGUCA...................... len:20 al:1
.....................................................CUCACUGCUUAAAAGAGUCACa.................... len:22 al:57
.....................................................CUCACUGCUUAAAAGAGUCACc.................... len:22 al:107
.....................................................CUCACUGCUUAAAAGAGUCcCU.................... len:22 al:6
.....................................................CUCACUuCUUAAAAGAGUCACU.................... len:22 al:1
.....................................................CaCACUGCUUAAAAGAGUCAC..................... len:21 al:1
.....................................................CUCACUGCUUAAAAGgGUCAC..................... len:21 al:1
.....................................................CUCACUGCUUAAAAGgGU........................ len:18 al:4
.....................................................CUCACUGCUUAAAAGA.......................... len:16 al:3
.....................................................CUCACUGCUUAAAgGAGUCACU.................... len:22 al:7
.....................................................CUCACUGCUUAAAAGAGUCACcA................... len:23 al:1
.....................................................CUCACUGCUUAAAAGAGUCu...................... len:20 al:3
.....................................................CUCgCUGCUUAAAAGAGUCACU.................... len:22 al:3
.....................................................CUCACUGCUUAAAAGAGUCgCU.................... len:22 al:1
......................................................cCACUGCUUAAAAGAGUCACU.................... len:21 al:1
......................................................UCACUGCUUAAAAGAGUCACa.................... len:21 al:2
......................................................UCACUGCUUAAAAGAGUCACU.................... len:21 al:10
......................................................UCACUGCUUAAAAGA.......................... len:15 al:1
......................................................UCACUGCUUAAAAGAGUCgCU.................... len:21 al:1
.......................................................CACUGCUUAAAAGAGUCACg.................... len:20 al:1
.......................................................CgCUGCUUAAAAGAGUCACU.................... len:20 al:1